BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038364
         (1076 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Vitis vinifera]
          Length = 913

 Score = 1203 bits (3112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/918 (61%), Positives = 716/918 (77%), Gaps = 15/918 (1%)

Query: 160  HSHKP--NSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQM 217
            H H P  N +T+ P      PT  L   +  S         +++N    L+SVK  HAQM
Sbjct: 9    HLHPPLQNPLTHKPIK---TPTSKLYLDSHSS---------DDSNVITSLTSVKMMHAQM 56

Query: 218  IKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQE 277
            IK+ + WN D   K+LI  YL FGDF SAA  F++   R+Y  W+SF+E+++S  G +  
Sbjct: 57   IKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHI 116

Query: 278  LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
            +LEV+ ELHGKGV+F S + ++ LK CT++M  WLG+E+H  LIKRGFD DV+L+CALMN
Sbjct: 117  VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMN 176

Query: 338  FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
            FYG+C  +E AN++F E+ + E  LLWNE I++ L++EK +  ++LFR+MQFS  KA + 
Sbjct: 177  FYGRCWGLEKANQVFHEMPNPEA-LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETA 235

Query: 398  TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            TIV++LQAC K+GA +  KQIHGYV +  L+S++S+CN LISMYS+N KLELA RVFDSM
Sbjct: 236  TIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 295

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            ++ N SSWNSMISSY  LG+++ AWSLF ++ SS ++PDI+TWNCLLSGHF HG  + VL
Sbjct: 296  ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVL 355

Query: 518  TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
             +L+ MQ  GF+PN SS++ VLQA++EL  L  G+E+HGY+LRNG D D+YVGTSL+DMY
Sbjct: 356  NILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMY 415

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            VKN  L +AQ VFDNMKNRNI AWNSL+SGY FKG+F +A ++LNQME+E IKPDLV+WN
Sbjct: 416  VKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWN 475

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
             ++SGY++WG  KEAL ++H  K+ G+ PNVV+WT+LISGS Q  N R+SLKFF QMQQE
Sbjct: 476  GMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQE 535

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             + PNS +++ LL+ C  L LLQ GKEIHCL ++NGFI+D +VAT LIDMYSKS +LK+A
Sbjct: 536  GVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNA 595

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             +VFR+  NKTLASWNCMIMGFAI+G GKEAI +F+E+ + G  PDAITFTALL+ACKNS
Sbjct: 596  HKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNS 655

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GL+ EGWKYFDSM TDY I+P +EHY CMVDLLG+AGYLDEAWD I TMP KPDATIWGA
Sbjct: 656  GLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGA 715

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLGSCRIH +L++AE A++ LFKLEP NSANY LMMNL ++ NRWED++ LR  M   GV
Sbjct: 716  LLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGV 775

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            ++  VWSWIQI+Q VHVFS++  PHP  G+IYFELY LVSEMKKLGYVPD  CVYQ++DE
Sbjct: 776  RNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDE 835

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
             EK K+LLSHTEKLAI YGL+K K+  PIRVIKNTR+CSDCH+AAKY+SLV+ RE+FLRD
Sbjct: 836  VEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRD 895

Query: 1058 GARFHHFREGECSCNDCW 1075
            G RFHHFREG+CSCND W
Sbjct: 896  GVRFHHFREGKCSCNDFW 913


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Glycine max]
          Length = 911

 Score = 1165 bits (3014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/909 (61%), Positives = 699/909 (76%), Gaps = 5/909 (0%)

Query: 169  NSPTSLALPPTDT-LAKQAQLSCISSGFC-FLNETNKFRCLSSVKSKHAQMIKMGKIWNS 226
            +SP+S++L  ++T +    Q S  S  F  F +     R L+SV+  HAQMIKM K  N 
Sbjct: 6    HSPSSVSLGTSETQIVSSPQFS--SPKFSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNL 63

Query: 227  DDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELH 286
              M  S++ +YLEFGDF SA K FF+ F+R+Y  W+SFLE++ SFGG+  E+LEV+ ELH
Sbjct: 64   VTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELH 123

Query: 287  GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
             KGV F S+ LT++LK+C  LM  WLG+EVHA L+KRGF  DVHL CAL+N Y KC  ++
Sbjct: 124  DKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGID 183

Query: 347  SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
             AN++F E + L++D LWN I+M  LR+E+WE+A++L R MQ +SAKA   TIVK+LQAC
Sbjct: 184  RANQVFDE-TPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQAC 242

Query: 407  AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             K+ A +EGKQIHGYV++    SN S+CN ++SMYSRNN+LELA  VFDS +DHNL+SWN
Sbjct: 243  GKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWN 302

Query: 467  SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
            S+ISSY   G ++ AW LF +M SS I+PDIITWN LLSGH   GSY+NVLT +R +QS 
Sbjct: 303  SIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSA 362

Query: 527  GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            GF+P+  S++  LQAV EL     G+E HGYI+R+ L+YD+YV TSL+DMY+KNDCL+ A
Sbjct: 363  GFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKA 422

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
            + VF + KN+NI AWNSLISGY +KGLF NA+K+L QM+EE IK DLV+WNSLVSGYS+ 
Sbjct: 423  EVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMS 482

Query: 647  GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
            G S+EAL +I+ +K+ G+ PNVV+WT++ISG  QNENY ++L+FF QMQ+E++KPNSTT+
Sbjct: 483  GCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTI 542

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
            S+LL+ C G  LL+ G+EIHC  +K+GF+ D Y+AT LIDMYSK G LK A EVFR    
Sbjct: 543  STLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKE 602

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            KTL  WNCM+MG+AIYG+G+E   LF  + +TG +PDAITFTALL+ CKNSGLV +GWKY
Sbjct: 603  KTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKY 662

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            FDSM TDY+I PTIEHYSCMVDLLGKAG+LDEA DFI  MP K DA+IWGA+L +CR+H 
Sbjct: 663  FDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHK 722

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
             ++ AEIA+R LF+LEP NSANY LMMN+ +   RW DVERL+ SM  +GVK   VWSWI
Sbjct: 723  DIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWI 782

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            Q+ Q +HVFS EG  HP  GEIYF+LY L+SE+KKLGYVPDT CV+Q+ID+ EK KVLLS
Sbjct: 783  QVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKVLLS 842

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            HTEKLA+ YGLMK K   PIRV+KNTR+C DCHTAAKY+SL R REIFLRDG RFHHF  
Sbjct: 843  HTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMN 902

Query: 1067 GECSCNDCW 1075
            GECSCND W
Sbjct: 903  GECSCNDRW 911


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Glycine max]
          Length = 911

 Score = 1136 bits (2938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/910 (59%), Positives = 690/910 (75%), Gaps = 5/910 (0%)

Query: 168  TNSPTSLALPPTDT-LAKQAQLSCISSGFC-FLNETNKFRCLSSVKSKHAQMIKMGKIWN 225
            ++SP+S++L  ++  L    Q S     F  F +   + R L+SV+  HAQ+IKM K  N
Sbjct: 5    SHSPSSISLGMSEAQLVSSPQFS--PPKFSPFFHPFGEIRTLNSVRELHAQIIKMPKKRN 62

Query: 226  SDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL 285
               M  S++ +YL+FGDF SA K FF+ F+R+Y  W+SF+E++ SFGG+  E+L V+ EL
Sbjct: 63   LVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKEL 122

Query: 286  HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
            H KGV F S+ LT++LK+C  LM  WLG+EVHA L+KRGF  DVHL CAL+N Y K   +
Sbjct: 123  HDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGI 182

Query: 346  ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
            + AN++F E + L++D LWN I+M  LR+EKWE+A++LFR MQ +SAKA   TIVK+LQA
Sbjct: 183  DGANQVFDE-TPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQA 241

Query: 406  CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            C K+ A +EGKQIHGYV++    SN S+CN ++SMYSRNN+LELA   FDS +DHN +SW
Sbjct: 242  CGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASW 301

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            NS+ISSY     ++ AW L  +M SS ++PDIITWN LLSGH   GSY+NVLT  R +QS
Sbjct: 302  NSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQS 361

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
             GF+P+  S++  LQAV  L     G+E HGYI+R+ L+YD+YV TSL+D Y+KNDCL  
Sbjct: 362  AGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDK 421

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
            A+ VF + KN+NI AWNSLISGY +KGLF NA+K+LNQM+EE IKPDLV+WNSLVSGYS+
Sbjct: 422  AEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSM 481

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+S+EAL +I+ +K+ G+ PNVV+WT++ISG  QNENY ++L+FF QMQ+E++KPNSTT
Sbjct: 482  SGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTT 541

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
            + +LL+ C G  LL+ G+EIHC  +++GF+ D Y+AT LIDMY K G LK A EVFR   
Sbjct: 542  ICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIK 601

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
             KTL  WNCM+MG+AIYG+G+E   LF E+ +TG +PDAITFTALL+ CKNSGLV +GWK
Sbjct: 602  EKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWK 661

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            YFDSM TDYNI PTIEHYSCMVDLLGKAG+LDEA DFI  +P K DA+IWGA+L +CR+H
Sbjct: 662  YFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLH 721

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
              ++ AEIA+R L +LEP NSANY LMMN+ +  +RW DVERL+ SM  +GVK   VWSW
Sbjct: 722  KDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSW 781

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            IQ+ Q +HVFS EG  HP  GEIYFELY L+SE+KKLGYV D  CV+Q+ID+ EK KVLL
Sbjct: 782  IQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNIDDSEKEKVLL 841

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
            SHTEKLA+ YGLMKTK  +PIRV+KNTR+C DCHT AKY+SL R REIFLRDG RFHHF 
Sbjct: 842  SHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRDGGRFHHFM 901

Query: 1066 EGECSCNDCW 1075
             GECSC D W
Sbjct: 902  NGECSCKDRW 911


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score = 1072 bits (2771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/859 (59%), Positives = 643/859 (74%), Gaps = 47/859 (5%)

Query: 217  MIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQ 276
            MIK+ + WN D   K+LI  YL FGDF SAA  F++   R+Y  W+SF+E+++S  G + 
Sbjct: 597  MIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLH 656

Query: 277  ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALM 336
             +LEV+ ELHGKGV+F S + ++ LK CT++M  WLG+E+H  LIKRGFD DV+L+CALM
Sbjct: 657  IVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALM 716

Query: 337  NFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS 396
            NFYG+C  +E AN++F E+ + E  LLWNE I++ L++EK +  ++LFR+MQFS  KA +
Sbjct: 717  NFYGRCWGLEKANQVFHEMPNPEA-LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAET 775

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
             TIV++LQAC K+GA +  KQIHGYV +  L+S++S+CN LISMYS+N KLELA RVFDS
Sbjct: 776  ATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDS 835

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M++ N SSWNSMISSY  LG+++ AWSLF ++ SS ++PDI+TWNCLLSGHF HG  + V
Sbjct: 836  MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEV 895

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
            L +L+ MQ  GF+PN SS++ VLQA++EL  L  G+E+HGY+LRNG D D+YVGTSL+DM
Sbjct: 896  LNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM 955

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
            YVKN  L +AQ VFDNMKNRNI A                                   W
Sbjct: 956  YVKNHSLXSAQAVFDNMKNRNIFA-----------------------------------W 980

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
            NSLVSGYS  G  ++AL +++ M+  GI P++VTW  +ISG       R++         
Sbjct: 981  NSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM------- 1033

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
                PNS +++ LL+ C  L LLQ GKEIHCL ++NGFI+D +VAT LIDMYSKS +LK+
Sbjct: 1034 ----PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKN 1089

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A +VFR+  NKTLASWNCMIMGFAI+G GKEAI +F+E+ + G  PDAITFTALL+ACKN
Sbjct: 1090 AHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 1149

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            SGL+ EGWKYFDSM TDY I+P +EHY CMVDLLG+AGYLDEAWD I TMP KPDATIWG
Sbjct: 1150 SGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWG 1209

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            ALLGSCRIH +L +AE A++ LFKLEP NSANY LMMNL ++ NRWED++ LR  M   G
Sbjct: 1210 ALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAG 1269

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            V++  VWSWIQI+Q VHVFS++  PHP  G+IYFELY LVSEMKKLGYVPD  CVYQ++D
Sbjct: 1270 VRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMD 1329

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            E EK K+LLSHTEKLAI YGL+K K+  PIRVIKNTR+CSDCH+AAKY+SLV+ RE+FLR
Sbjct: 1330 EVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLR 1389

Query: 1057 DGARFHHFREGECSCNDCW 1075
            DG RFHHFREG+CSCND W
Sbjct: 1390 DGVRFHHFREGKCSCNDFW 1408


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score = 1012 bits (2617), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/865 (55%), Positives = 635/865 (73%), Gaps = 2/865 (0%)

Query: 212  SKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
            + HA+M+K+   +  + + K LI  YLEFG+F  A+  FFL F R+   W  FLE  E F
Sbjct: 442  TTHARMMKLIDRFELEFISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDF 501

Query: 272  GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD-FDVH 330
            G E  ++LE +  L  KGV F   +L ++ ++C  LM  +LG  +H  LIKRG D  D  
Sbjct: 502  GVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTR 561

Query: 331  LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
            +  ALM FYG+C  ++ ANK+F E+    DDL WNEI+MV L++  WE A+KLFR M+FS
Sbjct: 562  VVSALMGFYGRCVSLDLANKIFDEMPK-RDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFS 620

Query: 391  SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             AKA   T+VK+LQ C+    F +G+QIHGYVL+   ESN+S+CN LI MYSRN KLE +
Sbjct: 621  GAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESS 680

Query: 451  TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             +VF+SM D NLSSWNS++SSYT LGYVD A  L ++M +  ++PDI+TWN LLSG+ + 
Sbjct: 681  RKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASK 740

Query: 511  GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
               ++ + +L+ +Q  G +PN SS+S +LQAV E  L+K G+  HGY++RN L YD+YV 
Sbjct: 741  ALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVE 800

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            T+L+DMY+K   L  A+ VFD M  +NIVAWNSLISG  + GL   A+ ++++ME+E IK
Sbjct: 801  TTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIK 860

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
             + V+WNSLVSGY+ WG++++AL ++  MK +G+ PNVV+WT+++SG  +N N+   LK 
Sbjct: 861  SNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKI 920

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F++MQ+E + PNS T+SSLL+  G L LL +GKE+H  CLKN   +DA+VAT L+DMY+K
Sbjct: 921  FLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAK 980

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
            SG+L+SA E+F    NK LASWNCMIMG+A++  G+E I +F+ +LE G +PDAITFT++
Sbjct: 981  SGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSV 1040

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L+ CKNSGLV EGWKYFD M + Y +IPTIEH SCMV+LLG++GYLDEAWDFIRTMP KP
Sbjct: 1041 LSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKP 1100

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            DATIWGA L SC+IH  LE AEIA +RL  LEP NSANY +M+NL +  NRW DVER+R+
Sbjct: 1101 DATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERIRN 1160

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
            SM    V+   +WSWIQIDQ VH+F AEG  HP  GEIYFELY LVSEMKK GY+PDTRC
Sbjct: 1161 SMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMKKSGYMPDTRC 1220

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
            ++Q++ E EK K+L+ HTEKLA+ YGL+K K  APIRV+KNT +CSDCHT AKY+S++R 
Sbjct: 1221 IHQNVSESEKEKLLMGHTEKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHTVAKYISVLRN 1280

Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
            REI L++GAR HHFR+G+CSCN+ W
Sbjct: 1281 REIVLQEGARVHHFRDGKCSCNNSW 1305


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  942 bits (2436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/769 (58%), Positives = 575/769 (74%), Gaps = 2/769 (0%)

Query: 308  MAFWLGVEVHASLIKRGFD-FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNE 366
            M  +LG+ +H  LIKRG D  D  +  A M FYG+C  +  ANKLF E+    DDL WNE
Sbjct: 1    MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPK-RDDLAWNE 59

Query: 367  IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
            I+MV LR+  WE A++LFREMQFS AKA   T+VK+LQ C+    F EG+QIHGYVL+  
Sbjct: 60   IVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLG 119

Query: 427  LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
            LESN+S+CN LI MYSRN KLEL+ +VF+SMKD NLSSWNS++SSYT LGYVD A  L +
Sbjct: 120  LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179

Query: 487  KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            +M    ++PDI+TWN LLSG+ + G  ++ + +L+ MQ  G +P+ SS+S +LQAV E  
Sbjct: 180  EMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239

Query: 547  LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
             LK G+  HGYILRN L YD+YV T+L+DMY+K   L  A+ VFD M  +NIVAWNSL+S
Sbjct: 240  HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299

Query: 607  GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
            G  +  L  +A+ ++ +ME+E IKPD ++WNSL SGY+  G+ ++AL +I  MK  G+ P
Sbjct: 300  GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359

Query: 667  NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            NVV+WT++ SG  +N N+R +LK FI+MQ+E + PN+ TMS+LL+  G L LL +GKE+H
Sbjct: 360  NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
              CL+   I DAYVAT L+DMY KSG+L+SA E+F    NK+LASWNCM+MG+A++G G+
Sbjct: 420  GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE 479

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            E I  F  +LE G +PDAITFT++L+ CKNSGLV+EGWKYFD M + Y IIPTIEH SCM
Sbjct: 480  EGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCM 539

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VDLLG++GYLDEAWDFI+TM  KPDATIWGA L SC+IH  LE AEIA +RL  LEP NS
Sbjct: 540  VDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNS 599

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            ANY +M+NL +  NRWEDVER+R+ M    V+   +WSWIQIDQ VH+F AEG  HP  G
Sbjct: 600  ANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEG 659

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
            +IYFELY LVSEMKK GYVPDT C++QDI + EK K+L+ HTEKLA+ YGL+K K  API
Sbjct: 660  DIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPI 719

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RV+KNT +CSD HT AKYMS++R REI L++GAR HHFR+G+CSCND W
Sbjct: 720  RVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 236/511 (46%), Gaps = 73/511 (14%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  ++ +E++ E+   G       +  +L++C+    F  G ++H  +++ G + +V + 
Sbjct: 68  GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127

Query: 333 CALMNFYGKCRDVESANKLFSEVSD---------------------------------LE 359
            +L+  Y +   +E + K+F+ + D                                 L+
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            D++ WN ++         ++AI + + MQ +  K  + +I  +LQA A+ G    GK I
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           HGY+L++ L  ++ V   LI MY +   L  A  VFD M   N+ +WNS++S  +    +
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFT----------------------------- 509
             A +L  +M    I+PD ITWN L SG+ T                             
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367

Query: 510 ------HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
                 +G+++N L +   MQ  G  PN +++S +L+ +  L LL  G+E HG+ LR  L
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D YV T+L+DMY K+  LQ+A E+F  +KN+++ +WN ++ GY   G         + 
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNE 682
           M E  ++PD +++ S++S     G  +E       M++  GI P +   + ++   L   
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD-LLGRS 546

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            Y +    FIQ     +KP++T   + L +C
Sbjct: 547 GYLDEAWDFIQTMS--LKPDATIWGAFLSSC 575



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 119/314 (37%), Gaps = 45/314 (14%)

Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYA-- 259
           + CL  +K   A MI+M K     D +   SL   Y   G    A         +  A  
Sbjct: 303 YACL--LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360

Query: 260 --DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
              W++      S  G  +  L+V+ ++  +GV   +  ++ +LK+   L     G EVH
Sbjct: 361 VVSWTAIFSGC-SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419

Query: 318 ASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
              +++    D ++  AL++ YGK  D++SA ++F  + + +    WN ++M      + 
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN-KSLASWNCMLMGYAMFGRG 478

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNC 436
           E  I  F  M  +  +  + T   +L  C   G   EG K       +  +   +  C+C
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           ++ +  R+                               GY+D AW     M+   ++PD
Sbjct: 539 MVDLLGRS-------------------------------GYLDEAWDFIQTMS---LKPD 564

Query: 497 IITWNCLLSGHFTH 510
              W   LS    H
Sbjct: 565 ATIWGAFLSSCKIH 578


>gi|255564751|ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537458|gb|EEF39086.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/691 (59%), Positives = 527/691 (76%), Gaps = 14/691 (2%)

Query: 139 MPKLHSIYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSG---- 194
           M KL   Y  +N    +NQN  +H   S  +SP SL+L PT T       +   S     
Sbjct: 1   MDKLAPFYSPYNP--PLNQNPLTHNSKSRISSPPSLSLAPTPTSPDTTTTTTPLSASPSP 58

Query: 195 -------FCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAA 247
                  F  L+ ++  + L S+ + HAQ+IK   +WNSD   ++LI  YLE GDF S+A
Sbjct: 59  QQMNVPKFQSLDSSSDVKTLDSINAMHAQLIKTCSMWNSDSNARTLITSYLELGDFRSSA 118

Query: 248 KAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL 307
             FF+ F+R+Y  WSSF+E++E+ GG+  ++L V+ ELH KGV F S ++T++LK+C ++
Sbjct: 119 MVFFVGFARNYVMWSSFMEEFENCGGDPIQVLNVFKELHSKGVTFDSGMVTVVLKICIRV 178

Query: 308 MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
           M  WLG+EVHASLIKRGF+ D +++ AL+++Y +C  +E AN++F ++ D  D L WNE 
Sbjct: 179 MDLWLGLEVHASLIKRGFELDTYVRSALLSYYERCWSLEIANQVFHDMPD-RDGLFWNEA 237

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           IM+ L+NE++ NAI+LFR MQFS AKA + T++KMLQAC K  A +EGKQIHGYV+K AL
Sbjct: 238 IMINLKNERFGNAIELFRGMQFSFAKADASTVLKMLQACGKEEALNEGKQIHGYVIKHAL 297

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           ESNL + N LISMYSRN K+ L+ RVFDSMKDHNLSSWNS+ISSYT LGY++ AW LF++
Sbjct: 298 ESNLWISNSLISMYSRNGKIILSRRVFDSMKDHNLSSWNSIISSYTALGYLNGAWKLFHE 357

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M SS ++PDIITWNCLLSGH  HGSY+ VL +L+ MQ  GFRPN SS++ VLQ VTELRL
Sbjct: 358 MESSSVKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSSSITSVLQTVTELRL 417

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           LK G+  HGY++RN L+ DLYV  SL+DMYVKN+CL  +Q VFDNMKNRNIVAWNSLI+G
Sbjct: 418 LKIGKGIHGYVIRNRLNPDLYVEASLLDMYVKNNCLATSQAVFDNMKNRNIVAWNSLITG 477

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
           Y +KGLF +AK++LN+M+EE I+ D+V+WN LVSGYSIWG ++EAL +I+ +K+SG+ PN
Sbjct: 478 YAYKGLFDDAKRLLNKMKEEGIRADIVTWNGLVSGYSIWGHNEEALAVINEIKSSGLTPN 537

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           VV+WT+LISG  QN NY+ESL+FFIQMQQE IKPNSTT+SSLL+TCGGL LL+ GKEIHC
Sbjct: 538 VVSWTALISGCSQNGNYKESLEFFIQMQQEGIKPNSTTVSSLLKTCGGLSLLKKGKEIHC 597

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
           L +K+GF  D Y+AT L+DMYSKSGNLKSAREVF+++ NKTLA WNCMIMGFAIYG GKE
Sbjct: 598 LSVKSGFTGDIYIATALVDMYSKSGNLKSAREVFKRTKNKTLACWNCMIMGFAIYGLGKE 657

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSG 818
           AI L+ E+L  G  PD+ITFTALL+ACKNS 
Sbjct: 658 AISLYDEMLGAGILPDSITFTALLSACKNSA 688



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 235/505 (46%), Gaps = 74/505 (14%)

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           + +F+E+        S  +  +L+ C +V     G ++H  ++K   E +  V + L+S 
Sbjct: 150 LNVFKELHSKGVTFDSGMVTVVLKICIRVMDLWLGLEVHASLIKRGFELDTYVRSALLSY 209

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y R   LE+A +VF  M D                                    D + W
Sbjct: 210 YERCWSLEIANQVFHDMPDR-----------------------------------DGLFW 234

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
           N  +  +  +  + N + L RGMQ    + + S+V  +LQA  +   L  G++ HGY+++
Sbjct: 235 NEAIMINLKNERFGNAIELFRGMQFSFAKADASTVLKMLQACGKEEALNEGKQIHGYVIK 294

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
           + L+ +L++  SL+ MY +N                               G  + ++++
Sbjct: 295 HALESNLWISNSLISMYSRN-------------------------------GKIILSRRV 323

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
            + M++     +L SWNS++S Y+  G    A  + H M++S + P+++TW  L+SG   
Sbjct: 324 FDSMKDH----NLSSWNSIISSYTALGYLNGAWKLFHEMESSSVKPDIITWNCLLSGHAL 379

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           + +Y+E L    +MQ    +PNS++++S+LQT   L LL+ GK IH   ++N    D YV
Sbjct: 380 HGSYKEVLMILQKMQVTGFRPNSSSITSVLQTVTELRLLKIGKGIHGYVIRNRLNPDLYV 439

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
              L+DMY K+  L +++ VF    N+ + +WN +I G+A  G   +A  L +++ E G 
Sbjct: 440 EASLLDMYVKNNCLATSQAVFDNMKNRNIVAWNSLITGYAYKGLFDDAKRLLNKMKEEGI 499

Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
           + D +T+  L++     G  EE     + + +   + P +  ++ ++    + G   E+ 
Sbjct: 500 RADIVTWNGLVSGYSIWGHNEEALAVINEIKSS-GLTPNVVSWTALISGCSQNGNYKESL 558

Query: 861 DFIRTMP---FKPDATIWGALLGSC 882
           +F   M     KP++T   +LL +C
Sbjct: 559 EFFIQMQQEGIKPNSTTVSSLLKTC 583



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 201/458 (43%), Gaps = 106/458 (23%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C K  A   G ++H  +IK   + ++ +  +L++ Y +   +  + ++F  + D  
Sbjct: 272 MLQACGKEEALNEGKQIHGYVIKHALESNLWISNSLISMYSRNGKIILSRRVFDSMKD-H 330

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI------------------------ 395
           +   WN II           A KLF EM+ SS K                          
Sbjct: 331 NLSSWNSIISSYTALGYLNGAWKLFHEMESSSVKPDIITWNCLLSGHALHGSYKEVLMIL 390

Query: 396 -----------SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
                      S +I  +LQ   ++     GK IHGYV+++ L  +L V   L+ MY +N
Sbjct: 391 QKMQVTGFRPNSSSITSVLQTVTELRLLKIGKGIHGYVIRNRLNPDLYVEASLLDMYVKN 450

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           N L  +  VFD+MK+ N+ +WNS+I+ Y   G  D A  L NKM    I+ DI+TWN L+
Sbjct: 451 NCLATSQAVFDNMKNRNIVAWNSLITGYAYKGLFDDAKRLLNKMKEEGIRADIVTWNGLV 510

Query: 505 SGHFT-----------------------------------HGSYQNVLTLLRGMQSLGFR 529
           SG+                                     +G+Y+  L     MQ  G +
Sbjct: 511 SGYSIWGHNEEALAVINEIKSSGLTPNVVSWTALISGCSQNGNYKESLEFFIQMQQEGIK 570

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           PN ++VS +L+    L LLK G+E H   +++G   D+Y+ T+L+DMY K+  L++A+EV
Sbjct: 571 PNSTTVSSLLKTCGGLSLLKKGKEIHCLSVKSGFTGDIYIATALVDMYSKSGNLKSAREV 630

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F   KN+                                    L  WN ++ G++I+G  
Sbjct: 631 FKRTKNKT-----------------------------------LACWNCMIMGFAIYGLG 655

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
           KEA+ +   M  +GI P+ +T+T+L+S    +  Y  S
Sbjct: 656 KEAISLYDEMLGAGILPDSITFTALLSACKNSAQYNPS 693



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 41/332 (12%)

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           W   I  +L+NE +  +++ F  MQ    K +++T+  +LQ CG    L  GK+IH   +
Sbjct: 234 WNEAIMINLKNERFGNAIELFRGMQFSFAKADASTVLKMLQACGKEEALNEGKQIHGYVI 293

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
           K+    + +++  LI MYS++G +  +R VF    +  L+SWN +I  +   G    A  
Sbjct: 294 KHALESNLWISNSLISMYSRNGKIILSRRVFDSMKDHNLSSWNSIISSYTALGYLNGAWK 353

Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM---------STDYNIIPTIE 841
           LFHE+  +  +PD IT+  LL+     G  +E       M         S+  +++ T+ 
Sbjct: 354 LFHEMESSSVKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSSSITSVLQTVT 413

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL-----GSCRIHGHLEYAEIASR 896
               +    G  GY+      IR     PD  +  +LL      +C       +  + +R
Sbjct: 414 ELRLLKIGKGIHGYV------IRNR-LNPDLYVEASLLDMYVKNNCLATSQAVFDNMKNR 466

Query: 897 RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
                   N   +N ++   A    ++D +RL + M E G+++ +V +W   + +V  +S
Sbjct: 467 --------NIVAWNSLITGYAYKGLFDDAKRLLNKMKEEGIRADIV-TW---NGLVSGYS 514

Query: 957 AEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
             G    A          +++E+K  G  P+ 
Sbjct: 515 IWGHNEEALA--------VINEIKSSGLTPNV 538


>gi|358347383|ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503672|gb|AES84875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 561

 Score =  770 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/560 (63%), Positives = 439/560 (78%)

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            VLT  R + SLGF+P+  SV+  LQAV EL   K G+E HGYI+R+ L+YD+YV TSL+D
Sbjct: 2    VLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVD 61

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            MYVKNDCL+ AQ V    KN+N+ AWNSLISGY FKG F  A K+LNQM EE I PDLV+
Sbjct: 62   MYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVT 121

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            WN LVSGYS+ G+  EAL II+ +K+SGI PNVV+WT+LISG  QNE Y ++LK F QMQ
Sbjct: 122  WNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQ 181

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
             E++KPNSTT+ SLL  C G  LL+ G+E+HC  +K GF+ D YVAT LIDMYS++G LK
Sbjct: 182  AENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLK 241

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             A  VF K   KTL  WNCM+MG+AI+ +G+E ++L+ ++ E   +PDAITFTALL+ACK
Sbjct: 242  VAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACK 301

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            NSGLV+EGWKYFDSM  DYNI+PTIEHY CMVDLLGK+G+LDEA  FI TMP KPDA+IW
Sbjct: 302  NSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIW 361

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
            GALL SC+IH +++ AEIA+R+LFK+EP NSANY LMMNL +  NRW  VERL+HSM  +
Sbjct: 362  GALLASCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRWVAVERLKHSMTVL 421

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
             +K   VWSW Q++Q +HVFS EG PHP  GEIYFELY L+SE++KLGY PD  CV Q+I
Sbjct: 422  AMKIPPVWSWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLISEIRKLGYAPDLNCVCQNI 481

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            D+ EK K+L+SHTEKLA+VYG+MK K  +PIR++KNTR+C DCHT AKY+SLVR REI L
Sbjct: 482  DDNEKEKILMSHTEKLAMVYGVMKMKGGSPIRIVKNTRICFDCHTVAKYISLVRKREILL 541

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RDG RFHHF+ G+C+CND W
Sbjct: 542  RDGGRFHHFKNGKCACNDRW 561



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 176/366 (48%), Gaps = 39/366 (10%)

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           FR +     K  S ++   LQA  ++G F  GK+IHGY+++S L  ++ VC  L+ MY +
Sbjct: 6   FRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVK 65

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYT----------------------------GL 475
           N+ LE A  V    K+ N+ +WNS+IS Y+                            GL
Sbjct: 66  NDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGL 125

Query: 476 -------GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                  G +D A ++ N++ SS I P++++W  L+SG   +  Y + L +   MQ+   
Sbjct: 126 VSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENV 185

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           +PN +++  +L A     LLK G E H + ++ G   D+YV T+L+DMY +   L+ A  
Sbjct: 186 KPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYN 245

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VF+ ++ + +  WN ++ GY           + ++M E  I+PD +++ +L+S     G 
Sbjct: 246 VFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGL 305

Query: 649 SKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             E       M+    I P +  +  ++   L    + +    FI+     IKP+++   
Sbjct: 306 VDEGWKYFDSMQEDYNIVPTIEHYCCMVD-LLGKSGFLDEASHFIETMP--IKPDASIWG 362

Query: 708 SLLQTC 713
           +LL +C
Sbjct: 363 ALLASC 368



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 78/143 (54%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I    +NEK+ +A+K+F +MQ  + K  S TI  +L ACA      +G+++H + +
Sbjct: 157 WTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSM 216

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           K     ++ V   LI MYS   KL++A  VF+ +++  L  WN M+  Y    + +    
Sbjct: 217 KLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMI 276

Query: 484 LFNKMNSSRIQPDIITWNCLLSG 506
           L++KM    I+PD IT+  LLS 
Sbjct: 277 LYDKMRERHIRPDAITFTALLSA 299



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 125/313 (39%), Gaps = 44/313 (14%)

Query: 278 LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
           +L  +  LH  G    S  +T  L+   +L  F LG E+H  +++   ++DV++  +L++
Sbjct: 2   VLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVD 61

Query: 338 FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
            Y K   +E A  +     + ++   WN +I       ++  A+KL  +M          
Sbjct: 62  MYVKNDCLEKAQAVLHRAKN-KNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLV 120

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T   ++   +  G   E   I   +  S +  N+     LIS  S+N K   A ++F  M
Sbjct: 121 TWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQM 180

Query: 458 KDHNLSSWNSMISSY--------------------TGLGYVD------------------ 479
           +  N+   ++ I S                       LG+VD                  
Sbjct: 181 QAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKL 240

Query: 480 -VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
            VA+++FNK+     +  +  WNC++ G+  H   + V+ L   M+    RP+  + + +
Sbjct: 241 KVAYNVFNKIQ----EKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTAL 296

Query: 539 LQAVTELRLLKYG 551
           L A     L+  G
Sbjct: 297 LSACKNSGLVDEG 309



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/197 (19%), Positives = 89/197 (45%), Gaps = 3/197 (1%)

Query: 277 ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALM 336
           + L+++ ++  + V   S  +  +L  C        G E+H   +K GF  D+++  AL+
Sbjct: 172 DALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALI 231

Query: 337 NFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS 396
           + Y +   ++ A  +F+++ + +    WN ++M    +   E  + L+ +M+    +  +
Sbjct: 232 DMYSEAGKLKVAYNVFNKIQE-KTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDA 290

Query: 397 RTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
            T   +L AC   G   EG K          +   +    C++ +  ++  L+ A+   +
Sbjct: 291 ITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIE 350

Query: 456 SMK-DHNLSSWNSMISS 471
           +M    + S W ++++S
Sbjct: 351 TMPIKPDASIWGALLAS 367


>gi|224127907|ref|XP_002320193.1| predicted protein [Populus trichocarpa]
 gi|222860966|gb|EEE98508.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/500 (71%), Positives = 419/500 (83%), Gaps = 2/500 (0%)

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            MYVKNDCL ++Q +FDNMKN+NIVAWNSLISGY FKG F +AK++LN+M+EE IKPDL++
Sbjct: 1    MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            WNSLV+GYS+ G +KEAL +IH +K SG+ PNVV+WT+LISG  QN NY ES++ F+QMQ
Sbjct: 61   WNSLVAGYSMRGHTKEALALIHDIKISGLTPNVVSWTALISGCSQNGNYSESIEAFVQMQ 120

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
            +E IKPNS T+SSLL+TCGGL LLQ GKEIHCL ++  FI+D YVAT LID YSKSG+L+
Sbjct: 121  EEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSFIEDLYVATALIDTYSKSGDLE 180

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            SA +VF  SA KTLASWNCMIMGFAI G G+E I L   +   G  PDAITFTALL+ CK
Sbjct: 181  SAHKVFW-SAEKTLASWNCMIMGFAINGCGREVIALLDGMQRAGILPDAITFTALLSGCK 239

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            NSGLVEEGWK FD MS DY I PTIEHYSCM DLLG+AGYLDEAWDFI+TMP KPDA++W
Sbjct: 240  NSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGRAGYLDEAWDFIQTMPIKPDASVW 299

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
            GA+LGSCRIHG++E+AEIA++ LFKLEP NSANY LM++L AMSNRWEDV+R++  MD  
Sbjct: 300  GAMLGSCRIHGNIEFAEIAAKELFKLEPYNSANYVLMLSLYAMSNRWEDVDRIKDLMDTR 359

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            G+K   VWSWIQIDQ VH+FSA G PH   GEIY+ELY LVSE+KK GY+PD  CVYQ+I
Sbjct: 360  GIKPRQVWSWIQIDQRVHLFSAGGIPHQDEGEIYYELYQLVSELKKFGYLPDVNCVYQNI 419

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            DEEEK K+LLSHTEKLAI YGL+KT S APIRVIKNTR+CSDCHTAAK +SLVR REIFL
Sbjct: 420  DEEEKVKMLLSHTEKLAITYGLIKTSS-APIRVIKNTRICSDCHTAAKLISLVRSREIFL 478

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RDG RFHHF+ G+CSCND W
Sbjct: 479  RDGVRFHHFKAGKCSCNDYW 498



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 152/310 (49%), Gaps = 40/310 (12%)

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY +N+ L  +  +FD+MK+ N+ +WNS+IS Y+  G+ D A  L N+M    I+PD+IT
Sbjct: 1   MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60

Query: 500 WNCLLSGHFTHGSYQNVLTLLRG-----------------------------------MQ 524
           WN L++G+   G  +  L L+                                     MQ
Sbjct: 61  WNSLVAGYSMRGHTKEALALIHDIKISGLTPNVVSWTALISGCSQNGNYSESIEAFVQMQ 120

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
             G +PN +++S +L+    L LL+ G+E H   +R     DLYV T+L+D Y K+  L+
Sbjct: 121 EEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSFIEDLYVATALIDTYSKSGDLE 180

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
           +A +VF + + + + +WN +I G+   G       +L+ M+   I PD +++ +L+SG  
Sbjct: 181 SAHKVFWSAE-KTLASWNCMIMGFAINGCGREVIALLDGMQRAGILPDAITFTALLSGCK 239

Query: 645 IWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             G  +E       M N  GI P +  + S ++  L    Y +    FIQ     IKP++
Sbjct: 240 NSGLVEEGWKCFDMMSNDYGIKPTIEHY-SCMADLLGRAGYLDEAWDFIQTMP--IKPDA 296

Query: 704 TTMSSLLQTC 713
           +   ++L +C
Sbjct: 297 SVWGAMLGSC 306



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I    +N  +  +I+ F +MQ    K  S TI  +L+ C  +    +GK+IH   +
Sbjct: 96  WTALISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSI 155

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           + +   +L V   LI  YS++  LE A +VF S  +  L+SWN MI  +   G      +
Sbjct: 156 RKSFIEDLYVATALIDTYSKSGDLESAHKVFWS-AEKTLASWNCMIMGFAINGCGREVIA 214

Query: 484 LFNKMNSSRIQPDIITWNCLLSG 506
           L + M  + I PD IT+  LLSG
Sbjct: 215 LLDGMQRAGILPDAITFTALLSG 237



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 97/251 (38%), Gaps = 47/251 (18%)

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G   E +E + ++  +G+   S  ++ +L+ C  L     G E+H   I++ F  D+
Sbjct: 104 SQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSFIEDL 163

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQ 388
           ++  AL++ Y K  D+ESA+K+F      E  L  WN +IM    N      I L   MQ
Sbjct: 164 YVATALIDTYSKSGDLESAHKVFWSA---EKTLASWNCMIMGFAINGCGREVIALLDGMQ 220

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSR 443
            +     + T   +L  C   G   EG +      + Y +K  +E      +C+  +  R
Sbjct: 221 RAGILPDAITFTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHY----SCMADLLGR 276

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
                                           GY+D AW     M    I+PD   W  +
Sbjct: 277 -------------------------------AGYLDEAWDFIQTM---PIKPDASVWGAM 302

Query: 504 LSGHFTHGSYQ 514
           L     HG+ +
Sbjct: 303 LGSCRIHGNIE 313


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/795 (45%), Positives = 514/795 (64%), Gaps = 11/795 (1%)

Query: 292  FRSRILTIILKLCTKL--------MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            + + +L  +L+ C  L        +A  L  ++H+  ++ G   D  + CAL++   +  
Sbjct: 42   YSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLG 101

Query: 344  DVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
               S  +L  E ++   +D +LWN+ + +    E+W+ AI +FREMQ     A   T  +
Sbjct: 102  RGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCAR 161

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L AC + GA  EG+ +H Y LK AL+++  V   L  MY+ N  +  ATRV D+M   +
Sbjct: 162  VLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 221

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            +  WN++++    LG VD A  L  +M+ S  +P++ TWN +LSG   HG  +  L ++ 
Sbjct: 222  VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M   G RP+ ++VS +L++V    LL++G E H + LRN L+ D+Y GT+L+DMY K  
Sbjct: 282  SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             L  AQ+V D +++RN+  WNSL++GY   G F  A +++  M++  + PD+ +WN L++
Sbjct: 342  RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            GYS+ GQS +A++++  +K +G+ PNVV+WTSLISGS  N  Y +S  F  +MQ++ ++P
Sbjct: 402  GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +  TMS LL+ C GL L + GKE+HC  L+  +  D  V+T LIDMYSK G+L SA+ +F
Sbjct: 462  SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIF 521

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                 K L   N M+ G A++G G+EAI LFH++  +G +PD+ITFTALL AC++ GLV 
Sbjct: 522  ESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVT 581

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            EGW+YFDSM T Y + PT E+Y+CMVDLL + GYLDEA DFI   P  P A+ WGALL  
Sbjct: 582  EGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTG 641

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C IHG+L  AE+A+R LF LEP NSANY LMMNL      +++ E L+++M   GV S  
Sbjct: 642  CSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRP 701

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
             WSWIQI+Q +HVF  +G PHP T EIY EL  LV ++KK GYVPDT C+  ++ EEEK 
Sbjct: 702  GWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKE 761

Query: 1002 KVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
            K+LL HTEKLAI YGL+++  SRAP+RV+KNTR+C+DCH  AK++S +  R+I LRD  R
Sbjct: 762  KLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVR 821

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF +G+CSCND W
Sbjct: 822  FHHFVDGKCSCNDYW 836



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 146/623 (23%), Positives = 268/623 (43%), Gaps = 104/623 (16%)

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           E  E + V+ E+  +GV         +L  C +  A   G  VHA  +K   D    +  
Sbjct: 136 EWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPG 195

Query: 334 ALMNFYGKCRDVESANKLFSEVS-----------------DLEDDLL------------- 363
            L   Y +  DV +A ++   +                   L DD L             
Sbjct: 196 FLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEP 255

Query: 364 ----WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
               WN ++    R+ +   A+ +   M     +  + T+  +L++ A  G    G +IH
Sbjct: 256 NVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIH 315

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            + L++ LE ++     L+ MY++  +L+ A +V D+++  NL++WNS+++ Y   G  D
Sbjct: 316 CFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFD 375

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN-------- 531
           +A  L   M  +R+ PDI TWN L++G+  +G     + LLR +++ G  PN        
Sbjct: 376 IALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLI 435

Query: 532 -GS--------------------------SVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
            GS                          ++SV+L+A   L L K G+E H + LR   D
Sbjct: 436 SGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYD 495

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            D+ V T+L+DMY K   L +A+ +F++++ +N+V  N++++G    G    A ++ + M
Sbjct: 496 CDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDM 555

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNEN 683
               +KPD +++ +L++     G   E       M+   G+ P    +  ++    +   
Sbjct: 556 WNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGY 615

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTC---GGLGLLQNGKEIHCLCLKNGFIKDAYV 740
             E++ F   +++  I P ++   +LL  C   G L L +       +  +N FI + Y 
Sbjct: 616 LDEAMDF---IERSPIDPGASHWGALLTGCSIHGNLALAE-------VAARNLFILEPYN 665

Query: 741 ATGLI---------DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG-NGK---- 786
           +   +          MY ++ +LK A +  R   ++   SW  +  G  ++  +GK    
Sbjct: 666 SANYLLMMNLYEYERMYDEAESLKYAMKA-RGVDSRPGWSWIQIEQGIHVFEVDGKPHPE 724

Query: 787 ------EAILLFHELLETGFQPD 803
                 E I L  ++ + G+ PD
Sbjct: 725 TAEIYEELIRLVFQIKKAGYVPD 747



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 45/257 (17%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +       GE ++      E+   GV      ++++L+ C  L     G E+H   
Sbjct: 431 WTSLISG-SCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFA 489

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++R +D D+ +  AL++ Y K   + SA  +F  +   ++ +L N ++     + +   A
Sbjct: 490 LRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQ-KNLVLCNAMLTGLAVHGQGREA 548

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           I+LF +M  S  K  S T   +L AC  +G   EG +                       
Sbjct: 549 IELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEY---------------------- 586

Query: 441 YSRNNKLELATRVFDSMKDH-----NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
                        FDSM+          ++  M+      GY+D A     +   S I P
Sbjct: 587 -------------FDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIER---SPIDP 630

Query: 496 DIITWNCLLSGHFTHGS 512
               W  LL+G   HG+
Sbjct: 631 GASHWGALLTGCSIHGN 647


>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat [Oryza
            sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/795 (45%), Positives = 514/795 (64%), Gaps = 11/795 (1%)

Query: 292  FRSRILTIILKLCTKL--------MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            + + +L  +L+ C  L        +A  L  ++H+  ++ G   D  + CAL++   +  
Sbjct: 42   YSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLG 101

Query: 344  DVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
               S  +L  E ++   +D +LWN+ + +    E+W+ AI +FREMQ     A   T  +
Sbjct: 102  RGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCAR 161

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L AC + GA  EG+ +H Y LK AL+++  V   L  MY+ N  +  ATRV D+M   +
Sbjct: 162  VLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 221

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            +  WN++++    LG VD A  L  +M+ S  +P++ TWN +LSG   HG  +  L ++ 
Sbjct: 222  VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 281

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M   G RP+ ++VS +L++V    LL++G E H + LRN L+ D+Y GT+L+DMY K  
Sbjct: 282  SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 341

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             L  AQ+V D +++RN+  WNSL++GY   G F  A +++  M++  + PD+ +WN L++
Sbjct: 342  RLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 401

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            GYS+ GQS +A++++  +K +G+ PNVV+WTSLISGS  N  Y +S  F  +MQ++ ++P
Sbjct: 402  GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +  TMS LL+ C GL L + GKE+HC  L+  +  D  V+T LIDMYSK G+L SA+ +F
Sbjct: 462  SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIF 521

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                 K L   N M+ G A++G G+EAI LFH++  +G +PD+ITFTALL AC++ GLV 
Sbjct: 522  ESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVT 581

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            EGW+YFDSM T Y + PT E+Y+CMVDLL + GYLDEA DFI   P  P A+ WGALL  
Sbjct: 582  EGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTG 641

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C IHG+L  AE+A+R LF LEP NSANY LMMNL      +++ E L+++M   GV S  
Sbjct: 642  CSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRP 701

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
             WSWIQI+Q +HVF  +G PHP T EIY EL  LV ++KK GYVPDT C+  ++ EEEK 
Sbjct: 702  GWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKE 761

Query: 1002 KVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
            K+LL HTEKLAI YGL+++  SRAP+RV+KNTR+C+DCH  AK++S +  R+I LRD  R
Sbjct: 762  KLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVR 821

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF +G+CSCND W
Sbjct: 822  FHHFVDGKCSCNDYW 836



 Score =  180 bits (457), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/623 (23%), Positives = 268/623 (43%), Gaps = 104/623 (16%)

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           E  E + V+ E+  +GV         +L  C +  A   G  VHA  +K   D    +  
Sbjct: 136 EWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPG 195

Query: 334 ALMNFYGKCRDVESANKLFSEVS-----------------DLEDDLL------------- 363
            L   Y +  DV +A ++   +                   L DD L             
Sbjct: 196 FLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEP 255

Query: 364 ----WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
               WN ++    R+ +   A+ +   M     +  + T+  +L++ A  G    G +IH
Sbjct: 256 NVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIH 315

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            + L++ LE ++     L+ MY++  +L+ A +V D+++  NL++WNS+++ Y   G  D
Sbjct: 316 CFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFD 375

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN-------- 531
           +A  L   M  +R+ PDI TWN L++G+  +G     + LLR +++ G  PN        
Sbjct: 376 IALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLI 435

Query: 532 -GS--------------------------SVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
            GS                          ++SV+L+A   L L K G+E H + LR   D
Sbjct: 436 SGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYD 495

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            D+ V T+L+DMY K   L +A+ +F++++ +N+V  N++++G    G    A ++ + M
Sbjct: 496 CDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDM 555

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNEN 683
               +KPD +++ +L++     G   E       M+   G+ P    +  ++    +   
Sbjct: 556 WNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGY 615

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTC---GGLGLLQNGKEIHCLCLKNGFIKDAYV 740
             E++ F   +++  I P ++   +LL  C   G L L +       +  +N FI + Y 
Sbjct: 616 LDEAMDF---IERSPIDPGASHWGALLTGCSIHGNLALAE-------VAARNLFILEPYN 665

Query: 741 ATGLI---------DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG-NGK---- 786
           +   +          MY ++ +LK A +  R   ++   SW  +  G  ++  +GK    
Sbjct: 666 SANYLLMMNLYEYERMYDEAESLKYAMKA-RGVDSRPGWSWIQIEQGIHVFEVDGKPHPE 724

Query: 787 ------EAILLFHELLETGFQPD 803
                 E I L  ++ + G+ PD
Sbjct: 725 TAEIYEELIRLVFQIKKAGYVPD 747



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 45/257 (17%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +       GE ++      E+   GV      ++++L+ C  L     G E+H   
Sbjct: 431 WTSLISG-SCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFA 489

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++R +D D+ +  AL++ Y K   + SA  +F  +   ++ +L N ++     + +   A
Sbjct: 490 LRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQ-KNLVLCNAMLTGLAVHGQGREA 548

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           I+LF +M  S  K  S T   +L AC  +G   EG +                       
Sbjct: 549 IELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEY---------------------- 586

Query: 441 YSRNNKLELATRVFDSMKDH-----NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
                        FDSM+          ++  M+      GY+D A     +   S I P
Sbjct: 587 -------------FDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIER---SPIDP 630

Query: 496 DIITWNCLLSGHFTHGS 512
               W  LL+G   HG+
Sbjct: 631 GASHWGALLTGCSIHGN 647


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/697 (53%), Positives = 465/697 (66%), Gaps = 71/697 (10%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
             +++F+E+        S      L+ C +V     G +IHG ++K   + ++ +   L++
Sbjct: 507  VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMN 566

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
             Y R   LE A +VF  M +                                   P+ + 
Sbjct: 567  FYGRCWGLEKANQVFHEMPN-----------------------------------PEALL 591

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA-VTELRLLKYGRESHGYI 558
            WN  +  +      Q  + L R MQ    +   +++  VLQA ++EL  L  G+E+HGY+
Sbjct: 592  WNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYV 651

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            LRNG D D+YVGTSL+DMYVKN  L +AQ VFDNMKNRNI A                  
Sbjct: 652  LRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFA------------------ 693

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                             WNSLVSGYS  G  ++AL +++ M+  GI P++VTW  +ISG 
Sbjct: 694  -----------------WNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGY 736

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
                  +E+L FF QMQQE + PNS +++ LL+ C  L LLQ GKEIHCL ++NGFI+D 
Sbjct: 737  AMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDV 796

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            +VAT LIDMYSKS +LK+A +VFR+  NKTLASWNCMIMGFAI+G GKEAI +F+E+ + 
Sbjct: 797  FVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKV 856

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            G  PDAITFTALL+ACKNSGL+ EGWKYFDSM TDY I+P +EHY CMVDLLG+AGYLDE
Sbjct: 857  GVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDE 916

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            AWD I TMP KPDATIWGALLGSCRIH +L++AE A++ LFKLEP NSANY LMMNL ++
Sbjct: 917  AWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSI 976

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
             NRWED++ LR  M   GV++  VWSWIQI+Q VHVFS++  PHP  G+IYFELY LVSE
Sbjct: 977  FNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSE 1036

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            MKKLGYVPD  CVYQ++DE EK K+LLSHTEKLAI YGL+K K+  PIRVIKNTR+CSDC
Sbjct: 1037 MKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDC 1096

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H+AAKY+SLV+ RE+FLRDG RFHHFREG+CSCND W
Sbjct: 1097 HSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/506 (39%), Positives = 315/506 (62%), Gaps = 6/506 (1%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           +K  HAQMIK+ + WN D   K+LI  YL FGDF SAA  F++   R+Y  W+SF+E+++
Sbjct: 439 IKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFK 498

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G +  +LEV+ ELHGKGV+F S + ++ LK CT++M  WLG+E+H  LIKRGFD DV
Sbjct: 499 SSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDV 558

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           +L+CALMNFYG+C  +E AN++F E+ + E  LLWNE I++ L++EK +  ++LFR+MQF
Sbjct: 559 YLRCALMNFYGRCWGLEKANQVFHEMPNPEA-LLWNEAIILNLQSEKLQKGVELFRKMQF 617

Query: 390 SSAKAISRTIVKMLQAC-AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
           S  KA + TIV++LQA  +++G  + GK+ HGYVL++  + ++ V   LI MY +N+ L 
Sbjct: 618 SFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLT 677

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A  VFD+MK+ N+ +WNS++S Y+  G  + A  L N+M    I+PD++TWN ++SG+ 
Sbjct: 678 SAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYA 737

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             G  +  L     MQ  G  PN +S++ +L+A   L LL+ G+E H   +RNG   D++
Sbjct: 738 MWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVF 797

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           V T+L+DMY K+  L+NA +VF  ++N+ + +WN +I G+   GL   A  + N+M++  
Sbjct: 798 VATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVG 857

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRES 687
           + PD +++ +L+S     G   E       M  +  I P +  +  ++   L    Y + 
Sbjct: 858 VGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVD-LLGRAGYLDE 916

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTC 713
               I      +KP++T   +LL +C
Sbjct: 917 AWDLIHTMP--LKPDATIWGALLGSC 940



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 18/190 (9%)

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES--- 687
           PD  + N L+S Y  +G    A ++ +     G+  N + W S +      E ++ S   
Sbjct: 455 PDAAAKN-LISSYLGFGDFWSAAMVFY----VGLPRNYLKWNSFV------EEFKSSAGS 503

Query: 688 ----LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
               L+ F ++  + +  +S   S  L+TC  +  +  G EIH   +K GF  D Y+   
Sbjct: 504 LHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCA 563

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           L++ Y +   L+ A +VF +  N     WN  I+        ++ + LF ++  +  + +
Sbjct: 564 LMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAE 623

Query: 804 AITFTALLAA 813
             T   +L A
Sbjct: 624 TATIVRVLQA 633


>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
          Length = 818

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/795 (44%), Positives = 508/795 (63%), Gaps = 29/795 (3%)

Query: 292  FRSRILTIILKLCTKL--------MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            + + +L  +L+ C  L        +A  L  ++H+  ++ G   D  + CAL++   +  
Sbjct: 42   YSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLG 101

Query: 344  DVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
               S  +L  E ++   +D +LWN+ + +    E+W+ AI +FREMQ   A+ + R    
Sbjct: 102  RGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQ---ARGVPR---- 154

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
                         G+ +H Y LK AL+++  V   L  MY+ N  +  ATRV D+M   +
Sbjct: 155  -----------RRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGS 203

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            +  WN++++    LG VD A  L  +M+ S  +P++ TWN +LSG   HG  +  L ++ 
Sbjct: 204  VVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVA 263

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M   G RP+ ++VS +L++V    LL++G E H + LRN L+ D+Y GT+L+DMY K  
Sbjct: 264  SMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 323

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             L  AQ+VFD +++RN+  WNSL++GY   G F  A +++  M++  + PD+ +WN L++
Sbjct: 324  RLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLIT 383

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            GYS+ GQS +A++++  +K +G+ PNVV+WTSLISGS  N  Y +S  F  +MQ++ ++P
Sbjct: 384  GYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 443

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +  TMS LL+ C GL L + GKE+HC  L+  +  D  V+T LIDMYSK G+L SA+ +F
Sbjct: 444  SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIF 503

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                 K L   N M+ G A++G G+EAI LFH++  +G +PD+ITFTALL AC++ GLV 
Sbjct: 504  ESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVT 563

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            EGW+YFD M T Y + PT E+Y+CMVDLL + GYLDEA DFI   P  P A+ WGALL  
Sbjct: 564  EGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTG 623

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C IHG+L  AE+A+R LF+LEP NSANY LMMNL      +++ E L+++M   GV S  
Sbjct: 624  CSIHGNLALAEVAARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRP 683

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
             WSWIQI+Q +HVF  +G PHP T EIY EL  LV ++KK GYVPDT C+  ++ EEEK 
Sbjct: 684  GWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKE 743

Query: 1002 KVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
            K+LL HTEKLAI YGL+++  SRAP+RV+KNTR+C+DCH  AK++S +  R+I LRD  R
Sbjct: 744  KLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVR 803

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF +G+CSCND W
Sbjct: 804  FHHFVDGKCSCNDYW 818



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 106/237 (44%), Gaps = 6/237 (2%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +       GE ++      E+   GV      ++++L+ C  L     G E+H   
Sbjct: 413 WTSLISG-SCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFA 471

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++R +D D+ +  AL++ Y K   + SA  +F  +   ++ +L N ++     + +   A
Sbjct: 472 LRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQ-KNLVLCNAMLTGLAVHGQGREA 530

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLIS 439
           I+LF +M  S  K  S T   +L AC  +G   EG +   G   K  ++       C++ 
Sbjct: 531 IELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVD 590

Query: 440 MYSRNNKLELATRVFD-SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
           + +R   L+ A    + S  D   S W ++++  +  G  ++A +     N  R++P
Sbjct: 591 LLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHG--NLALAEVAARNLFRLEP 645


>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Brachypodium distachyon]
          Length = 851

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/805 (42%), Positives = 504/805 (62%), Gaps = 21/805 (2%)

Query: 292  FR-SRILTIILKLCTKLM-------------AFWLGVEVHASLIKRGF-DFDVHLKCALM 336
            FR +R+L  +L+ C  ++             A  L  ++H+  ++ G    +  + CAL 
Sbjct: 47   FRDARLLLSLLRQCGDMICLDEEDTGSSLRAARRLAPQLHSLAVRAGHATREPRVACALS 106

Query: 337  NFYGKCRDVESANKLFSEVSDLE---DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            +   +     S+ +L  E  + E   D +LWN+ + +     +W+ AI  FREMQ     
Sbjct: 107  DLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQVAMLAEAGEWDEAIGAFREMQARGVA 166

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATR 452
            A    + ++L AC +  A  EGK +H + LK+ L +++  V   L  MY+    +  AT 
Sbjct: 167  ADGYALARVLHACGRAAARREGKAVHAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATA 226

Query: 453  VFDSMKDHNLS-SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
            V         S +W+++++    LG VD A  L  +M     +P + TWN +LSG   HG
Sbjct: 227  VLLRATPPPRSVAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHG 286

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
              +  L +LR M   G  P+ ++VS +L++V    ++++G E H + LR+GL  D Y GT
Sbjct: 287  RDREALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGT 346

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            +L+DMY K   L  A+ VFD +++RN+  WNSL++G+ + G F  A +++ +M+   + P
Sbjct: 347  ALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDP 406

Query: 632  DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
            ++ +WN L++GYS+ G S +A++++  +K +G+ PNVV+WTSLISGS  N  Y +S  FF
Sbjct: 407  NVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFF 466

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             +MQ++ ++P+  TM  LL+ C GL LL+ GKE+HC  L+  +  D  V T LIDMYSK+
Sbjct: 467  KEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKA 526

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G+L SA+ +F +  NK L   N M+ G A++G   EAI LFH+L  +G +PD+ITFTALL
Sbjct: 527  GSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALL 586

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             AC++ GL+ EGW+YFD+M T Y ++PT E+Y+CMVDLL ++GYLDEA   I   P  P 
Sbjct: 587  TACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAMALIERSPVDPG 646

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A++WGALL  C IHG+L+ AE+A+R LF+LEP NSANY ++M+L      +++ + L+++
Sbjct: 647  ASLWGALLTGCSIHGNLDLAEVAARNLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYA 706

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M   GV +   WSWIQI+Q +HVF  +G+PHP T EI  EL  LV ++K  GYVPDT CV
Sbjct: 707  MKARGVNTRPGWSWIQIEQGIHVFEVDGSPHPETAEICEELMSLVRQIKMTGYVPDTSCV 766

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
              ++ EEEK K+LL HTEKLAI YGL+ +  SR P+RVIKNTR+CSDCH  AK++S + G
Sbjct: 767  VYNVPEEEKEKLLLCHTEKLAITYGLIHSDASRMPVRVIKNTRMCSDCHEVAKHISALCG 826

Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
            R+I LRD  RFHHF +G CSCND W
Sbjct: 827  RQIILRDAVRFHHFVDGNCSCNDYW 851



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 224/515 (43%), Gaps = 77/515 (14%)

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH- 330
            GE  E +  + E+  +GV      L  +L  C +  A   G  VHA  +K G   D H 
Sbjct: 147 AGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKAVHAHALKAGL-VDAHP 205

Query: 331 -LKCALMNFYGKCRDVESANKLFSEVSD------------------LEDDLL-------- 363
            +   L   Y +  DV +A  +    +                   L DD +        
Sbjct: 206 LVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAMELAGRMAR 265

Query: 364 ---------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
                    WN ++    R+ +   A+ + R M        + T+  +L++ A  G    
Sbjct: 266 DGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRH 325

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G ++H + L+  L  +      L+ MY++  +L+ A RVFD+++  NL++WNS+++ +  
Sbjct: 326 GMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAY 385

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN--- 531
            G  + A  L  +M  +R+ P++ TWN L++G+  +G     + LLR +++ G  PN   
Sbjct: 386 AGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVS 445

Query: 532 ------GS--------------------------SVSVVLQAVTELRLLKYGRESHGYIL 559
                 GS                          ++ V+L+A   L LLK G+E H + L
Sbjct: 446 WTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHCFAL 505

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           R   D D+ VGT+L+DMY K   L +A+ +F  ++N+N+V  N++++G    G    A  
Sbjct: 506 RRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAIT 565

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGS 678
           + + +    +KPD +++ +L++     G   E      +M+   G+ P    +  ++   
Sbjct: 566 LFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLL 625

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            ++    E++     +++  + P ++   +LL  C
Sbjct: 626 ARSGYLDEAMAL---IERSPVDPGASLWGALLTGC 657



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 4/223 (1%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +       GE ++    + E+   GV      + ++L+ C  L     G E+H   
Sbjct: 446 WTSLISG-SCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHCFA 504

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++R +D D+ +  AL++ Y K   + SA ++F  + + ++ +  N ++     + +   A
Sbjct: 505 LRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQN-KNLVCCNAMLTGLAVHGQSHEA 563

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLIS 439
           I LF ++  S  K  S T   +L AC  +G   EG +       K  +        C++ 
Sbjct: 564 ITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVD 623

Query: 440 MYSRNNKLELATRVFD-SMKDHNLSSWNSMISSYTGLGYVDVA 481
           + +R+  L+ A  + + S  D   S W ++++  +  G +D+A
Sbjct: 624 LLARSGYLDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLA 666


>gi|242089043|ref|XP_002440354.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
 gi|241945639|gb|EES18784.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
          Length = 866

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/817 (42%), Positives = 511/817 (62%), Gaps = 27/817 (3%)

Query: 285  LHGKGVIFRSRILTIILKLCTKLM-----------AFWLGVEVHASLIKRGFDFDVHLKC 333
            L G       R+L  +L+ C +L+           A  +  ++H+  ++ G   D  + C
Sbjct: 51   LRGVDSFRDGRLLVSLLRQCAELLHGDEDTERISAARRVAPQLHSLAVRAGHARDPRVAC 110

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLED----------DLLWNEIIMVKLRNEKWENAIKL 383
            AL +   +     SA +L  E + +E+           +LWN+ + +    E+W +AI  
Sbjct: 111  ALADLLVRLGRGASARRLLEEATAVEEEGEDGDEEEDSVLWNKRVAMLAEAEEWGDAIAA 170

Query: 384  FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYS 442
            F EM+            + L AC + GA  EG+ +H +  K+  + ++  V   L  MY+
Sbjct: 171  FGEMRARGVAPDGYACARALHACGRAGAPREGQAVHAHAAKAGHVAAHPLVPGFLAGMYA 230

Query: 443  RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS---RIQPDIIT 499
             +  +  A RV ++ +D    +WN +++    LG VD A  L  +M  S    ++P + T
Sbjct: 231  ESADVGAARRVLET-EDAPPVAWNVVVACCARLGLVDDALDLAERMARSGRLELEPSLAT 289

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
            WN +LSG   +G  +    ++R M   G +P+ SS+S +L++V  L LL +G E+HG+ L
Sbjct: 290  WNAVLSGCARNGRDREAFGVVRIMLDQGLQPDSSSMSSLLKSVASLGLLAHGMEAHGFFL 349

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            RN L+ D+Y GT+ +DMY K   L+ AQ+VFD ++ RNI  WNSL++GY   G F +A  
Sbjct: 350  RNQLEPDVYTGTAFVDMYAKCGHLEYAQKVFDTLELRNITTWNSLVAGYANAGQFDHALD 409

Query: 620  MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
            ++ +M+   + PD+ +WN L++GYS+ G+S +A++++  +K  G+ PNVV+WTSLISGS 
Sbjct: 410  LVEEMKRNRLDPDVTTWNGLINGYSVNGKSSQAVLLLRQIKAIGLTPNVVSWTSLISGSC 469

Query: 680  QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
             N +Y +S  FF +MQ++ ++P+  TMS LL+ C GL LL+ GKE+HC  L+  + +D  
Sbjct: 470  NNGDYEDSFYFFNEMQKDHVQPSVVTMSVLLRACAGLALLKKGKELHCFALRRAYDRDMV 529

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            V T LIDMYSKSGNL SA+ +F +     L S N M+ G A +G G EAI LFH++  +G
Sbjct: 530  VGTALIDMYSKSGNLASAQRIFERIQENNLVSSNAMLTGLAAHGQGHEAIALFHDMCNSG 589

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             +PD+ITFTALL AC++  LV EGW+YFD+M + Y + PT+E+Y+CMVDLL + GYLDEA
Sbjct: 590  LKPDSITFTALLTACRSMDLVTEGWEYFDTMESRYGVTPTVENYACMVDLLARCGYLDEA 649

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
             DFI   PFK  +++WGALL  C +HG+L  AE A+R+LFKLEP NSANY  M++L    
Sbjct: 650  MDFINKSPFKSVSSLWGALLTGCTLHGNLALAEAAARKLFKLEPYNSANYLQMVSLYEHE 709

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
              +++ E L+++M    + +   WSWIQI+Q +HVF  EG PHP T EIY EL  LV ++
Sbjct: 710  QMFDEAESLKYAMKARALDTRPGWSWIQIEQSIHVFEVEGKPHPDTAEIYEELIRLVFQI 769

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTRVCSDC 1038
            +K GYVPDT C+  ++ EEEK K+LLSHTEKLAI YGL+ +  SR PIRVIKNTR+C+DC
Sbjct: 770  RKSGYVPDTSCIVYNVPEEEKEKLLLSHTEKLAITYGLIHSDASRVPIRVIKNTRMCNDC 829

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H  AK++S +  R+I LRD  RFH+F +G+CSCN+CW
Sbjct: 830  HELAKHISALCARQIILRDADRFHYFTDGKCSCNNCW 866


>gi|413946759|gb|AFW79408.1| hypothetical protein ZEAMMB73_086527 [Zea mays]
          Length = 865

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/827 (42%), Positives = 501/827 (60%), Gaps = 37/827 (4%)

Query: 285  LHGKGVIFRSRILTIILKLCTKL-----------MAFWLGVEVHASLIKRGFDFDVHLKC 333
            L G       R+L  +L+ C  +            A  L  ++H+  ++ G   D  + C
Sbjct: 40   LRGVETFRDGRLLVSLLRQCADVPHGDEDTERLSAARHLAPQLHSLAVRAGRARDPRVAC 99

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLE-----------DDLLWNEIIMVKLRNEKWENAIK 382
            AL +   +     SA +L  E +  E           D +LWN+ + +    E+W +AI 
Sbjct: 100  ALADLLARLGRWASARRLLQEATAAEEEGKEEGDEEVDTMLWNKRVAMLAEAEEWGDAIA 159

Query: 383  LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMY 441
             F EM+            + L AC + GA  EG+ +H +  K+  + ++  V   L  MY
Sbjct: 160  AFAEMRARGVAPDGYACARALHACGRAGAPREGQAVHAHAAKAGHVAAHPLVPGFLAGMY 219

Query: 442  SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS---RIQPDII 498
            + +  +  A RV ++ +D    +WN +++    LG VD A  L  +M  S      P + 
Sbjct: 220  AESADVGAARRVLET-EDAPPVAWNVVVACCARLGLVDDALDLAERMARSGPVEASPSLA 278

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            TWN +LSG   HG  +    ++R M   G  P+ SS+S +L++V  L LL +G E+H + 
Sbjct: 279  TWNAVLSGCARHGRDREAFGVVRSMLERGIPPDSSSMSSLLKSVASLGLLAHGMEAHCFF 338

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            LR+ L+ D+Y GT+ +DMY K   L+ AQ+VFD ++ RNI  WNSL++GY   G F +A 
Sbjct: 339  LRHRLEPDVYTGTAFVDMYAKCGRLEYAQKVFDTLELRNITTWNSLVAGYSNAGQFDHAL 398

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
             ++ +M+   + PD+ +WN L+SGYS+ G+S +A++++  MK  G+ PNVV+WTSLISGS
Sbjct: 399  DLVEEMKRNRLDPDITTWNGLISGYSMNGRSSQAVLLLRQMKAIGLTPNVVSWTSLISGS 458

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL-KNGFIKD 737
              N +Y +S  FF +MQ++ ++P+  TMS LL+ C GL LL  GKE+HC  L +  + +D
Sbjct: 459  CHNGDYEDSFYFFNEMQKDHVQPSVVTMSVLLRACAGLALLAKGKELHCFALRRRAYDRD 518

Query: 738  AYVATGLIDMYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
              VAT LIDMYSKSGNL SA  +F R    K L SWN M+ G A +G G+EAI LF ++ 
Sbjct: 519  MVVATALIDMYSKSGNLASATRIFERIQEEKNLVSWNAMLTGLAAHGQGREAIALFDDMC 578

Query: 797  E------TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
                    G +PD+ITFTALL AC++  L+ EGW YFD+M + Y + PT+E+Y+CMVDLL
Sbjct: 579  SASAGAGAGLKPDSITFTALLTACRSMELITEGWDYFDAMESRYGVTPTVENYACMVDLL 638

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
             + GYLDEA DFI   PFK  A++WGALL  C +HG+L  AE A+R+LFKLEP NSANY 
Sbjct: 639  ARCGYLDEATDFINRSPFKSAASLWGALLTGCVVHGNLALAEAAARKLFKLEPYNSANYL 698

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG-APHPATGEIY 969
             M++L      +++ E L+++M    + +   WSWIQI+Q +HVF  EG  PHP T EIY
Sbjct: 699  QMVSLYEREQMFDEAESLKYAMKARALNTRPGWSWIQIEQSIHVFQVEGKPPHPDTAEIY 758

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK-SRAPIRV 1028
             +L  LV +++K GYV DT C+  ++ EE+K K+LLSHTEKLAI YGL+ +  S  PIRV
Sbjct: 759  QQLVRLVLQIRKAGYVADTSCIAYNVPEEDKEKLLLSHTEKLAITYGLIHSDASGTPIRV 818

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IKNTR+CSDCH  AK++S + GR+I LRD  RFHHF +G+CSCND W
Sbjct: 819  IKNTRMCSDCHEVAKHISALCGRQIILRDADRFHHFTDGKCSCNDRW 865



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 118/550 (21%), Positives = 214/550 (38%), Gaps = 168/550 (30%)

Query: 255 SRSYADWSSFL-------EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL 307
           S S A W++ L        D E+FG  V+ +LE       +G+   S  ++ +LK    L
Sbjct: 274 SPSLATWNAVLSGCARHGRDREAFG-VVRSMLE-------RGIPPDSSSMSSLLKSVASL 325

Query: 308 MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
                G+E H   ++   + DV+   A ++ Y KC  +E A K+F  + +L +   WN +
Sbjct: 326 GLLAHGMEAHCFFLRHRLEPDVYTGTAFVDMYAKCGRLEYAQKVFDTL-ELRNITTWNSL 384

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           +       ++++A+ L  EM+                                   ++ L
Sbjct: 385 VAGYSNAGQFDHALDLVEEMK-----------------------------------RNRL 409

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMK----DHNLSSWNSMISSYTGLGYVDVAWS 483
           + +++  N LIS YS N +   A  +   MK      N+ SW S+IS     G  + ++ 
Sbjct: 410 DPDITTWNGLISGYSMNGRSSQAVLLLRQMKAIGLTPNVVSWTSLISGSCHNGDYEDSFY 469

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            FN+M    +QP ++T                                   +SV+L+A  
Sbjct: 470 FFNEMQKDHVQPSVVT-----------------------------------MSVLLRACA 494

Query: 544 ELRLLKYGRESHGYIL-RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAW 601
            L LL  G+E H + L R   D D+ V T+L+DMY K+  L +A  +F+ ++  +N+V+W
Sbjct: 495 GLALLAKGKELHCFALRRRAYDRDMVVATALIDMYSKSGNLASATRIFERIQEEKNLVSW 554

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-- 659
           N++++G                                    +  GQ +EA+ +   M  
Sbjct: 555 NAMLTG-----------------------------------LAAHGQGREAIALFDDMCS 579

Query: 660 ----KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                 +G+ P+ +T+T+L++     E   E   +F  M+                    
Sbjct: 580 ASAGAGAGLKPDSITFTALLTACRSMELITEGWDYFDAMESR------------------ 621

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNC 774
            G+    +   C                ++D+ ++ G L  A +   +S  K+ AS W  
Sbjct: 622 YGVTPTVENYAC----------------MVDLLARCGYLDEATDFINRSPFKSAASLWGA 665

Query: 775 MIMGFAIYGN 784
           ++ G  ++GN
Sbjct: 666 LLTGCVVHGN 675


>gi|326509061|dbj|BAJ86923.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 866

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/776 (42%), Positives = 480/776 (61%), Gaps = 12/776 (1%)

Query: 312  LGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVESANKLFSEVS--DLEDDLLWNEII 368
            L  ++H+  ++ G    + H+ CAL +   +     S  +L +E    D +D +LWN+ +
Sbjct: 91   LAPQLHSLAVRAGHATREPHVACALADLLERLGRGASGRRLLAEGDGDDWKDAVLWNKQV 150

Query: 369  MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL- 427
             +      W+ AI  FREM+     A      + L AC + G   EG+ +H + L+  L 
Sbjct: 151  AMLAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAGRRLEGRAVHAHALRVGLV 210

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            +++  V   L  MY+    +  AT V        + +WN++I+    LG VD A  L  +
Sbjct: 211  DAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCVRLGLVDDALELAER 270

Query: 488  M-----NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            M      S   +P + TWN +LSG   HG  +  L ++R M   G  P+ ++VS +L++V
Sbjct: 271  MARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLKSV 330

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
                 L +G E H + LR+GL  D Y GT+L+DMY K   L  AQ VFD +++RN+  WN
Sbjct: 331  ANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLATWN 390

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
            SL++G+   G F  A +++  M+   I P++ +WN L++GY++ G S +A++++  +K++
Sbjct: 391  SLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSA 450

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
            G+ PNVV+WTSLISGS    +Y++S  FF +MQQ+ I+P+  TM  LL+ C GL LL  G
Sbjct: 451  GVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKG 510

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            KE+HC  L+  +  +  V+T LIDMY+K+G+L SA+ VF +   K L   N M+ G A++
Sbjct: 511  KELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVH 570

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G   EA  LFH++  +G +PD ITFTALL AC++ GLV E W+Y D M   Y + PT EH
Sbjct: 571  GQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEH 630

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            ++CMVDLL + GYLDEA  FI   P +P A+ WGALL  C IHG+L+ AE A+R LFKLE
Sbjct: 631  HACMVDLLARRGYLDEAMTFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHLFKLE 690

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG--A 960
            P NSANY  MM+L      +++ E L+++M   GV +   WSW Q  + +HVF  +G  +
Sbjct: 691  PHNSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHVFEVDGGSS 750

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
            PHP T EIY E+  LVS+M+ +GYVPDT C+  D+ EEEK  +LL HTEKLA+VYGL+++
Sbjct: 751  PHPETPEIYDEMSRLVSQMRMVGYVPDTGCIAYDVPEEEKELLLLCHTEKLAVVYGLIRS 810

Query: 1021 -KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KSRAP+RV+KNTR+C DCH   K++S + GR+I LRD +RFHHF +G+CSC+D W
Sbjct: 811  DKSRAPVRVVKNTRMCRDCHEVIKHVSALCGRQIILRDASRFHHFVDGKCSCDDYW 866



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/458 (21%), Positives = 193/458 (42%), Gaps = 72/458 (15%)

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           + A W++ L      G + +E L V   +  +G++  +  ++ +LK      +   G EV
Sbjct: 284 TLATWNTVLSGCARHGRD-REALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEV 342

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H   ++ G   D +   AL++ Y KC  ++ A ++F  + +  +   WN ++        
Sbjct: 343 HCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGL-EHRNLATWNSLVAGHANAGH 401

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
           ++ A++L   M+                                   +  ++ N++  N 
Sbjct: 402 FDRALELVEAMK-----------------------------------RHRIDPNVTTWNG 426

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+ Y+ N                               G    A  L  ++ S+ + P+
Sbjct: 427 LITGYAMN-------------------------------GLSSQAMLLLRQIKSAGVAPN 455

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
           +++W  L+SG    G YQ+  T    MQ  G +P+  ++ V+L+A   L LL  G+E H 
Sbjct: 456 VVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHC 515

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
           + LR   D ++ V T+L+DMY K   L +A+ VF  ++ +N+V  N++++G    G    
Sbjct: 516 FALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHE 575

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLI 675
           A  + + M    +KPD +++ +L++     G   EA   +  M+   G+ P       ++
Sbjct: 576 AAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMV 635

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
              L    Y +    FI  ++   +P +++  +LL  C
Sbjct: 636 D-LLARRGYLDEAMTFI--ERSPAEPGASSWGALLTGC 670



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 4/225 (1%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +      GG+ Q+    + E+   G+      + ++L+ C  L     G E+H   
Sbjct: 459 WTSLISG-SCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFA 517

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++R +D +V +  AL++ Y K   + SA ++F  V   ++ +  N ++     + +   A
Sbjct: 518 LRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQG-KNLVCCNAMLTGLAVHGQAHEA 576

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLIS 439
             LF +M  S  K    T   +L AC  +G   E  + +     K  +        C++ 
Sbjct: 577 AALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVD 636

Query: 440 MYSRNNKLELA-TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           + +R   L+ A T +  S  +   SSW ++++     G +D+A S
Sbjct: 637 LLARRGYLDEAMTFIERSPAEPGASSWGALLTGCAIHGNLDLAES 681


>gi|326516644|dbj|BAJ92477.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518576|dbj|BAJ88317.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 867

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/776 (42%), Positives = 480/776 (61%), Gaps = 12/776 (1%)

Query: 312  LGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVESANKLFSEVS--DLEDDLLWNEII 368
            L  ++H+  ++ G    + H+ CAL +   +     S  +L +E    D +D +LWN+ +
Sbjct: 92   LAPQLHSLAVRAGHATREPHVACALADLLERLGRGASGRRLLAEGDGDDWKDAVLWNKQV 151

Query: 369  MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL- 427
             +      W+ AI  FREM+     A      + L AC + G   EG+ +H + L+  L 
Sbjct: 152  AMLAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAGRRLEGRAVHAHALRVGLV 211

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            +++  V   L  MY+    +  AT V        + +WN++I+    LG VD A  L  +
Sbjct: 212  DAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCVRLGLVDDALELAER 271

Query: 488  M-----NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            M      S   +P + TWN +LSG   HG  +  L ++R M   G  P+ ++VS +L++V
Sbjct: 272  MARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLKSV 331

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
                 L +G E H + LR+GL  D Y GT+L+DMY K   L  AQ VFD +++RN+  WN
Sbjct: 332  ANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLATWN 391

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
            SL++G+   G F  A +++  M+   I P++ +WN L++GY++ G S +A++++  +K++
Sbjct: 392  SLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSA 451

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
            G+ PNVV+WTSLISGS    +Y++S  FF +MQQ+ I+P+  TM  LL+ C GL LL  G
Sbjct: 452  GVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKG 511

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            KE+HC  L+  +  +  V+T LIDMY+K+G+L SA+ VF +   K L   N M+ G A++
Sbjct: 512  KELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVH 571

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G   EA  LFH++  +G +PD ITFTALL AC++ GLV E W+Y D M   Y + PT EH
Sbjct: 572  GQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEH 631

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            ++CMVDLL + GYLDEA  FI   P +P A+ WGALL  C IHG+L+ AE A+R LFKLE
Sbjct: 632  HACMVDLLARRGYLDEAMAFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHLFKLE 691

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG--A 960
            P NSANY  MM+L      +++ E L+++M   GV +   WSW Q  + +HVF  +G  +
Sbjct: 692  PHNSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHVFEVDGGSS 751

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
            PHP T EIY E+  LVS+M+ +GYVPDT C+  D+ EEEK  +LL HTEKLA+VYGL+++
Sbjct: 752  PHPETPEIYDEMSRLVSQMRMVGYVPDTGCIAYDVPEEEKELLLLCHTEKLAVVYGLIRS 811

Query: 1021 -KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KSRAP+RV+KNTR+C DCH   K++S + GR+I LRD +RFHHF +G+CSC+D W
Sbjct: 812  DKSRAPVRVVKNTRMCRDCHEVIKHVSALCGRQIILRDASRFHHFVDGKCSCDDYW 867



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/458 (21%), Positives = 193/458 (42%), Gaps = 72/458 (15%)

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           + A W++ L      G + +E L V   +  +G++  +  ++ +LK      +   G EV
Sbjct: 285 TLATWNTVLSGCARHGRD-REALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEV 343

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H   ++ G   D +   AL++ Y KC  ++ A ++F  + +  +   WN ++        
Sbjct: 344 HCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGL-EHRNLATWNSLVAGHANAGH 402

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
           ++ A++L   M+                                   +  ++ N++  N 
Sbjct: 403 FDRALELVEAMK-----------------------------------RHRIDPNVTTWNG 427

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+ Y+ N                               G    A  L  ++ S+ + P+
Sbjct: 428 LITGYAMN-------------------------------GLSSQAMLLLRQIKSAGVAPN 456

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
           +++W  L+SG    G YQ+  T    MQ  G +P+  ++ V+L+A   L LL  G+E H 
Sbjct: 457 VVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHC 516

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
           + LR   D ++ V T+L+DMY K   L +A+ VF  ++ +N+V  N++++G    G    
Sbjct: 517 FALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHE 576

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLI 675
           A  + + M    +KPD +++ +L++     G   EA   +  M+   G+ P       ++
Sbjct: 577 AAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMV 636

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
              L    Y +    FI  ++   +P +++  +LL  C
Sbjct: 637 D-LLARRGYLDEAMAFI--ERSPAEPGASSWGALLTGC 671



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 4/225 (1%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +      GG+ Q+    + E+   G+      + ++L+ C  L     G E+H   
Sbjct: 460 WTSLISG-SCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFA 518

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++R +D +V +  AL++ Y K   + SA ++F  V   ++ +  N ++     + +   A
Sbjct: 519 LRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQG-KNLVCCNAMLTGLAVHGQAHEA 577

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLIS 439
             LF +M  S  K    T   +L AC  +G   E  + +     K  +        C++ 
Sbjct: 578 AALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVD 637

Query: 440 MYSRNNKLELATRVFD-SMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           + +R   L+ A    + S  +   SSW ++++     G +D+A S
Sbjct: 638 LLARRGYLDEAMAFIERSPAEPGASSWGALLTGCAIHGNLDLAES 682


>gi|5262157|emb|CAB45786.1| putative protein (fragment) [Arabidopsis thaliana]
 gi|7267600|emb|CAB80912.1| putative protein (fragment) [Arabidopsis thaliana]
          Length = 500

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/500 (60%), Positives = 383/500 (76%)

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            MY+K   L  A+ VFD M  +NIVAWNSL+SG  +  L  +A+ ++ +ME+E IKPD ++
Sbjct: 1    MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 60

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            WNSL SGY+  G+ ++AL +I  MK  G+ PNVV+WT++ SG  +N N+R +LK FI+MQ
Sbjct: 61   WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 120

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
            +E + PN+ TMS+LL+  G L LL +GKE+H  CL+   I DAYVAT L+DMY KSG+L+
Sbjct: 121  EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 180

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            SA E+F    NK+LASWNCM+MG+A++G G+E I  F  +LE G +PDAITFT++L+ CK
Sbjct: 181  SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 240

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            NSGLV+EGWKYFD M + Y IIPTIEH SCMVDLLG++GYLDEAWDFI+TM  KPDATIW
Sbjct: 241  NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 300

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
            GA L SC+IH  LE AEIA +RL  LEP NSANY +M+NL +  NRWEDVER+R+ M   
Sbjct: 301  GAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 360

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
             V+   +WSWIQIDQ VH+F AEG  HP  G+IYFELY LVSEMKK GYVPDT C++QDI
Sbjct: 361  RVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDI 420

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
             + EK K+L+ HTEKLA+ YGL+K K  APIRV+KNT +CSD HT AKYMS++R REI L
Sbjct: 421  SDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVL 480

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            ++GAR HHFR+G+CSCND W
Sbjct: 481  QEGARVHHFRDGKCSCNDSW 500



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 8/289 (2%)

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS----SWNSMISSYTGLGYVDVAWSLF 485
           N+   N L+S  S    L+ A  +   M+   +     +WNS+ S Y  LG  + A  + 
Sbjct: 22  NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 81

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
            KM    + P++++W  + SG   +G+++N L +   MQ  G  PN +++S +L+ +  L
Sbjct: 82  GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 141

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
            LL  G+E HG+ LR  L  D YV T+L+DMY K+  LQ+A E+F  +KN+++ +WN ++
Sbjct: 142 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 201

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GI 664
            GY   G         + M E  ++PD +++ S++S     G  +E       M++  GI
Sbjct: 202 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 261

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            P +   + ++   L    Y +    FIQ     +KP++T   + L +C
Sbjct: 262 IPTIEHCSCMVD-LLGRSGYLDEAWDFIQTMS--LKPDATIWGAFLSSC 307



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 74/142 (52%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  I     +N  + NA+K+F +MQ       + T+  +L+    +   H GK++HG+ L
Sbjct: 96  WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 155

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           +  L  +  V   L+ MY ++  L+ A  +F  +K+ +L+SWN M+  Y   G  +   +
Sbjct: 156 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIA 215

Query: 484 LFNKMNSSRIQPDIITWNCLLS 505
            F+ M  + ++PD IT+  +LS
Sbjct: 216 AFSVMLEAGMEPDAITFTSVLS 237



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 119/314 (37%), Gaps = 45/314 (14%)

Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYA-- 259
           + CL  +K   A MI+M K     D +   SL   Y   G    A         +  A  
Sbjct: 35  YACL--LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 92

Query: 260 --DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
              W++      S  G  +  L+V+ ++  +GV   +  ++ +LK+   L     G EVH
Sbjct: 93  VVSWTAIFSGC-SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 151

Query: 318 ASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
              +++    D ++  AL++ YGK  D++SA ++F  + + +    WN ++M      + 
Sbjct: 152 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN-KSLASWNCMLMGYAMFGRG 210

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNC 436
           E  I  F  M  +  +  + T   +L  C   G   EG K       +  +   +  C+C
Sbjct: 211 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 270

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           ++ +  R+                               GY+D AW     M+   ++PD
Sbjct: 271 MVDLLGRS-------------------------------GYLDEAWDFIQTMS---LKPD 296

Query: 497 IITWNCLLSGHFTH 510
              W   LS    H
Sbjct: 297 ATIWGAFLSSCKIH 310


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
            [Vitis vinifera]
          Length = 758

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 282/761 (37%), Positives = 429/761 (56%), Gaps = 36/761 (4%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA ++K G   D HL   L++ Y        A  +   V +  +   ++ +I    + 
Sbjct: 34   QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE-PNVFSFSTLIYAFSKF 92

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             ++ +A+  F +M        +R +   ++ACA + A    +Q+HG    S  +S+  V 
Sbjct: 93   HQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            + L+ MY + N++  A RVFD M + ++ SW++++++Y   G VD A  LF++M  S +Q
Sbjct: 153  SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P++I+WN +++G    G Y   + +   M   GF P+G+++S VL AV +L  L  G   
Sbjct: 213  PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            HGY+++ GL  D  V ++L+DMY K  C     +VFD M +                   
Sbjct: 273  HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHM------------------ 314

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                             D+ S N+ + G S  GQ + +L +   +K+ G+  NVV+WTS+
Sbjct: 315  -----------------DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSM 357

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+   QN    E+L+ F +MQ   +KPNS T+  LL  CG +  L +GK  HC  L+ G 
Sbjct: 358  IACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              D YV + LIDMY+K G ++++R  F     K L  WN +I G+A++G  KEA+ +F  
Sbjct: 418  STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +  +G +PD I+FT +L+AC  SGL EEG  YF+SMS+ Y I   +EHY+CMV LL +AG
Sbjct: 478  MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             L++A+  IR MP  PDA +WGALL SCR+H ++   E+A+ +LF+LEP N  NY L+ N
Sbjct: 538  KLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSN 597

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A    W +V R+R  M   G++     SWI++   VH+  A    HP   +I  +L  
Sbjct: 598  IYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDK 657

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            L  EMKKLGY P+   V QD++E++K ++L  H+EKLA+V+GL+ T    P++VIKN R+
Sbjct: 658  LSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRI 717

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH   K++S    REIF+RD  RFHHF+EG CSC D W
Sbjct: 718  CGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758



 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 255/542 (47%), Gaps = 40/542 (7%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           LS  +  HA ++K G ++N   +   L+ HY     F  A     L    +   +S+ + 
Sbjct: 29  LSQTRQAHAHILKTG-LFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            +  F  +    L  + ++  +G++  +R+L   +K C  L A     +VH      GFD
Sbjct: 88  AFSKFH-QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146

Query: 327 FDVHLKCALMNFYGKC---RD----------------------------VESANKLFSEV 355
            D  ++ +L++ Y KC   RD                            V+ A +LFSE+
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206

Query: 356 SD--LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            D  ++ +L+ WN +I     +  +  A+ +F +M     +    TI  +L A   +   
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G  IHGYV+K  L S+  V + LI MY + +     ++VFD M   ++ S N+ I   
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
           +  G V+ +  LF ++    ++ ++++W  +++    +G     L L R MQ  G +PN 
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNS 386

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++  +L A   +  L +G+ +H + LR G+  D+YVG++L+DMY K   +Q ++  FD 
Sbjct: 387 VTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDG 446

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           +  +N+V WN++I+GY   G    A ++ + M+    KPD++S+  ++S  S  G ++E 
Sbjct: 447 IPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506

Query: 653 LVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
               + M +  GI   V  +  +++   +     ++   +  +++  + P++    +LL 
Sbjct: 507 SYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQA---YAMIRRMPVNPDACVWGALLS 563

Query: 712 TC 713
           +C
Sbjct: 564 SC 565



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/533 (23%), Positives = 233/533 (43%), Gaps = 109/533 (20%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           ++  TI   L +     +  + +Q H ++LK+ L ++  +   L+S Y+ N     AT V
Sbjct: 13  SVQHTIFNCLNS--TTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLV 70

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            D + + N+ S++++I +++       A S F++M                         
Sbjct: 71  LDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQM------------------------- 105

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
                L RG+      P+   +   ++A   L  LK  R+ HG    +G D D +V +SL
Sbjct: 106 -----LTRGLM-----PDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSL 155

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           + MY+K + +++A  VFD M   ++V+W++L++ Y  +G    AK++ ++M +  ++P+L
Sbjct: 156 VHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNL 215

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           +SWN +++G++                +SG+Y                    E++  F+ 
Sbjct: 216 ISWNGMIAGFN----------------HSGLY-------------------SEAVLMFLD 240

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY----- 748
           M     +P+ TT+SS+L   G L  L  G  IH   +K G + D  V++ LIDMY     
Sbjct: 241 MHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSC 300

Query: 749 --------------------------SKSGNLKSAREVFRKSANK----TLASWNCMIMG 778
                                     S++G ++S+  +FR+  ++     + SW  MI  
Sbjct: 301 TSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIAC 360

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            +  G   EA+ LF E+   G +P+++T   LL AC N   +  G K     S    I  
Sbjct: 361 CSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHG-KAAHCFSLRRGIST 419

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            +   S ++D+  K G +  +      +P K +   W A++    +HG  + A
Sbjct: 420 DVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAKEA 471



 Score = 46.2 bits (108), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 19/199 (9%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           NSTT +SL QT          ++ H   LK G   D ++AT L+  Y+ +     A  V 
Sbjct: 23  NSTT-ASLSQT----------RQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVL 71

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                  + S++ +I  F+ +     A+  F ++L  G  PD     + + AC     ++
Sbjct: 72  DLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK 131

Query: 822 EGWKYFDSMS-TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
              +     S + ++    ++  S +V +  K   + +A      M F+PD   W AL+ 
Sbjct: 132 PARQVHGIASVSGFDSDSFVQ--SSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVA 188

Query: 881 SCRIHGHLEYAEIASRRLF 899
           +    G ++ A    +RLF
Sbjct: 189 AYARQGCVDEA----KRLF 203


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Glycine max]
          Length = 748

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/763 (36%), Positives = 437/763 (57%), Gaps = 37/763 (4%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN--EIIMVKL 372
            + HA +++     D  L  +L++FY     + +     +  S L    L++   +I    
Sbjct: 21   QAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFA 80

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            R+  + + +  F  +        +  +   +++CA + A   G+Q+H +   S   ++  
Sbjct: 81   RSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSI 140

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            V + L  MY + +++  A ++FD M D ++  W++MI+ Y+ LG V+ A  LF +M S  
Sbjct: 141  VASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGG 200

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            ++P++++WN +L+G   +G Y   + + R M   GF P+GS+VS VL AV  L  +  G 
Sbjct: 201  VEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGA 260

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + HGY+++ GL  D +V ++++DMY K  C++    VFD                     
Sbjct: 261  QVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFD--------------------- 299

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                      ++EE EI     S N+ ++G S  G    AL + +  K+  +  NVVTWT
Sbjct: 300  ----------EVEEMEIG----SLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWT 345

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            S+I+   QN    E+L+ F  MQ   ++PN+ T+ SL+  CG +  L +GKEIHC  L+ 
Sbjct: 346  SIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRR 405

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G   D YV + LIDMY+K G ++ AR  F K +   L SWN ++ G+A++G  KE + +F
Sbjct: 406  GIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMF 465

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            H +L++G +PD +TFT +L+AC  +GL EEGW+ ++SMS ++ I P +EHY+C+V LL +
Sbjct: 466  HMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSR 525

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
             G L+EA+  I+ MPF+PDA +WGALL SCR+H +L   EIA+ +LF LEP N  NY L+
Sbjct: 526  VGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILL 585

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A    W++  R+R  M   G++    +SWI++   VH+  A    HP   +I  +L
Sbjct: 586  SNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKL 645

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L  +MKK GY+P T  V QD++E++K ++L  H+EKLA+V GL+ T    P++VIKN 
Sbjct: 646  DKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNL 705

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH   K +S + GREI++RD  RFHHF++G CSC D W
Sbjct: 706  RICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/541 (22%), Positives = 231/541 (42%), Gaps = 78/541 (14%)

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           +   +  + +Q H  +L+  L S+  +   L+S Y+  N L L+T               
Sbjct: 11  SSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYA--NALSLSTP-------------- 54

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
                            L   ++S    P + +++ L+        + +VLT    +  L
Sbjct: 55  ----------------QLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPL 98

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
              P+   +   +++   LR L  G++ H +   +G   D  V +SL  MY+K D + +A
Sbjct: 99  RLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDA 158

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           +++FD M +R++V W+++I+GY   GL   AK++  +M    ++P+LVSWN +++G+   
Sbjct: 159 RKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFG-- 216

Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
                         N+G                    Y E++  F  M  +   P+ +T+
Sbjct: 217 --------------NNGF-------------------YDEAVGMFRMMLVQGFWPDGSTV 243

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           S +L   G L  +  G ++H   +K G   D +V + ++DMY K G +K    VF +   
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
             + S N  + G +  G    A+ +F++  +   + + +T+T+++A+C  +G   E  + 
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF----IRTMPFKPDATIWGALLGSC 882
           F  M   Y + P       ++   G    L    +     +R   F  D  +  AL+   
Sbjct: 364 FRDMQA-YGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFD-DVYVGSALIDMY 421

Query: 883 RIHGHLEYAEIASRRLF-KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
              G ++ A    RR F K+   N  ++N +M   AM  + ++   + H M + G K  L
Sbjct: 422 AKCGRIQLA----RRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDL 477

Query: 942 V 942
           V
Sbjct: 478 V 478



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 176/425 (41%), Gaps = 86/425 (20%)

Query: 159 RHSHKPNSIT--NSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQ 216
           R  H P+ +T  +    L L P   L   A  SC S            R L   +  HA 
Sbjct: 81  RSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCAS-----------LRALDPGQQLHAF 129

Query: 217 MIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEV 275
               G +  +D +V S + H YL+      A K F     R    WS+ +  Y   G  V
Sbjct: 130 AAASGFL--TDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG-LV 186

Query: 276 QELLEVWGELHGKGV-------------------------IFRSRIL----------TII 300
           +E  E++GE+   GV                         +FR  ++          + +
Sbjct: 187 EEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCV 246

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE- 359
           L     L    +G +VH  +IK+G   D  +  A+++ YGKC  V+  +++F EV ++E 
Sbjct: 247 LPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEI 306

Query: 360 ---------------------------------DDLLWNEIIMVKLRNEKWENAIKLFRE 386
                                            + + W  II    +N K   A++LFR+
Sbjct: 307 GSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRD 366

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           MQ    +  + TI  ++ AC  + A   GK+IH + L+  +  ++ V + LI MY++  +
Sbjct: 367 MQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGR 426

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++LA R FD M   NL SWN+++  Y   G       +F+ M  S  +PD++T+ C+LS 
Sbjct: 427 IQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSA 486

Query: 507 HFTHG 511
              +G
Sbjct: 487 CAQNG 491



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 4/213 (1%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +      G ++ E LE++ ++   GV   +  +  ++  C  + A   G E+H   
Sbjct: 344 WTSIIASCSQNGKDL-EALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFS 402

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++RG   DV++  AL++ Y KC  ++ A + F ++S L + + WN ++     + K +  
Sbjct: 403 LRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSAL-NLVSWNAVMKGYAMHGKAKET 461

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLIS 439
           +++F  M  S  K    T   +L ACA+ G   EG + +  + +   +E  +    CL++
Sbjct: 462 MEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVT 521

Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           + SR  KLE A  +   M  + +   W +++SS
Sbjct: 522 LLSRVGKLEEAYSIIKEMPFEPDACVWGALLSS 554


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/887 (33%), Positives = 461/887 (51%), Gaps = 77/887 (8%)

Query: 225  NSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
            NSD  V  +L+   +  GD  SA +AF     R    +++ +      G  V E  E + 
Sbjct: 261  NSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNV-EAFEQYY 319

Query: 284  ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
             +   GV         IL  C+   A   G  +H+ + + G   DV +  AL++ Y +C 
Sbjct: 320  RMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCG 379

Query: 344  DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            D+  A +LF  +    D + WN II    R E    A++L+++MQ    K    T + +L
Sbjct: 380  DLPKARELFYTMPK-RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
             ACA   A+ +GK IH  +L+S ++SN  + N L++MY R   L  A  VF+  +     
Sbjct: 439  SACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR--- 495

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                                            D+I+WN +++GH  HGSY+    L + M
Sbjct: 496  --------------------------------DVISWNSMIAGHAQHGSYETAYKLFQEM 523

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            Q+    P+  + + VL        L+ G++ HG I  +GL  D+ +G +L++MY++   L
Sbjct: 524  QNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSL 583

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------ 631
            Q+A+ VF ++++R++++W ++I G   +G  + A ++  QM+ E  +P            
Sbjct: 584  QDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVC 643

Query: 632  -----------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
                                   D    N+L+S YS  G   +A  +   M +     ++
Sbjct: 644  TSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSR----DI 699

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            V+W  +I+G  QN   + +++F  QMQ++D+ PN  +  SLL  C     L+ GK +H  
Sbjct: 700  VSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAE 759

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             +K     D  V   LI MY+K G+   A+EVF     K + +WN MI  +A +G   +A
Sbjct: 760  IVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKA 819

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +  F+ + + G +PD  TFT++L+AC ++GLV EG++ F SM ++Y ++PTIEHY C+V 
Sbjct: 820  LGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVG 879

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+A    EA   I  MPF PDA +W  LLG+CRIHG++  AE A+    KL   N A 
Sbjct: 880  LLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAV 939

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y L+ N+ A + RW+DV ++R  M+  G++     SWI++D I+H F A    HP T EI
Sbjct: 940  YILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEI 999

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y EL  L  EM++ GY PDT+ V  D+ +  +   L +H+E+LAI YGL+KT    PIR+
Sbjct: 1000 YAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRI 1059

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KN R+C DCHTA+K++S + GREI  RD  RFH F+ G+CSC D W
Sbjct: 1060 FKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 173/718 (24%), Positives = 323/718 (44%), Gaps = 77/718 (10%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS--LIFHYLEFGDFTSAAKAFFLYF 254
            L    + R L   K  HAQM++    W   D+  S  LI  Y++      A + F    
Sbjct: 33  LLQNCTRKRLLPEAKRIHAQMVEA---WVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMP 89

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            R    W+S +  Y   G + ++  +++ E+   G I        IL  C        G 
Sbjct: 90  RRDVISWNSLISCYAQQGFK-KKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H+ +IK G+  D  ++ +L++ YGKC D+  A ++F+ +S   D + +N ++ +  + 
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP-RDVVSYNTMLGLYAQK 207

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              +  + LF +M          T + +L A        EGK+IH   ++  L S++ V 
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L++M  R   ++ A + F    D ++  +N++I++    G+   A+  + +M S    
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD--- 324

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
                                           G   N ++   +L A +  + L+ G+  
Sbjct: 325 --------------------------------GVALNRTTYLSILNACSTSKALEAGKLI 352

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H +I  +G   D+ +G +L+ MY +   L  A+E+F  M  R++++WN++I+GY  +   
Sbjct: 353 HSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDR 412

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN------- 667
             A ++  QM+ E +KP  V++  L+S  +      +  +I   +  SGI  N       
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472

Query: 668 ------------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                                   V++W S+I+G  Q+ +Y  + K F +MQ E+++P++
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            T +S+L  C     L+ GK+IH    ++G   D  +   LI+MY + G+L+ AR VF  
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS 592

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
             ++ + SW  MI G A  G   +AI LF ++   GF+P   TF+++L  C +S  ++EG
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEG 652

Query: 824 WKYFDS-MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            K     +++ Y +   + +   ++    K+G + +A +    MP + D   W  ++ 
Sbjct: 653 KKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIA 707



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/622 (25%), Positives = 282/622 (45%), Gaps = 77/622 (12%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ CT+         +HA +++     D+ L   L+N Y KCR V  A+++F E+    
Sbjct: 33  LLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPR-R 91

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + WN +I    +    + A +LF EMQ +       T + +L AC        GK+IH
Sbjct: 92  DVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIH 151

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             ++K+  + +  V N L+SMY +   L  A +VF  +   ++ S+N+M+  Y    YV 
Sbjct: 152 SQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVK 211

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
               LF +M+S  I PD +T+  LL                                   
Sbjct: 212 ECLGLFGQMSSEGISPDKVTYINLLD---------------------------------- 237

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A T   +L  G+  H   +  GL+ D+ VGT+L+ M V+   + +A++ F    +R++V
Sbjct: 238 -AFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVV 296

Query: 600 AWNSLISGYCFKGLFVNA-----------------------------------KKMLNQM 624
            +N+LI+     G  V A                                   K + + +
Sbjct: 297 VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHI 356

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
            E+    D+   N+L+S Y+  G   +A  + + M       ++++W ++I+G  + E+ 
Sbjct: 357 SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR----DLISWNAIIAGYARREDR 412

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
            E+++ + QMQ E +KP   T   LL  C       +GK IH   L++G   + ++A  L
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           ++MY + G+L  A+ VF  +  + + SWN MI G A +G+ + A  LF E+     +PD 
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
           ITF ++L+ CKN   +E G K      T+  +   +   + ++++  + G L +A +   
Sbjct: 533 ITFASVLSGCKNPEALELG-KQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFH 591

Query: 865 TMPFKPDATIWGALLGSCRIHG 886
           ++  + D   W A++G C   G
Sbjct: 592 SLQHR-DVMSWTAMIGGCADQG 612



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 238/545 (43%), Gaps = 78/545 (14%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T V +LQ C +     E K+IH  ++++ +  ++ + N LI+MY +   +  A +VF  M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              ++ SWNS+IS Y   G+   A+ LF +M ++   P+ IT+  +L+  ++    +N  
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN-- 146

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
                                            G++ H  I++ G   D  V  SL+ MY
Sbjct: 147 ---------------------------------GKKIHSQIIKAGYQRDPRVQNSLLSMY 173

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            K   L  A++VF  +  R++V++N+++  Y  K        +  QM  E I PD V++ 
Sbjct: 174 GKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYI 233

Query: 638 SLVSGYSIWGQSKEALVI----IHHMKNSGIY---------------------------P 666
           +L+  ++      E   I    +    NS I                             
Sbjct: 234 NLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR 293

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           +VV + +LI+   Q+ +  E+ + + +M+ + +  N TT  S+L  C     L+ GK IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               ++G   D  +   LI MY++ G+L  ARE+F     + L SWN +I G+A   +  
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
           EA+ L+ ++   G +P  +TF  LL+AC NS    +G    + +     I       + +
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANAL 472

Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK------ 900
           +++  + G L EA +       + D   W +++     HG  E A     +LF+      
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETA----YKLFQEMQNEE 527

Query: 901 LEPCN 905
           LEP N
Sbjct: 528 LEPDN 532



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 4/187 (2%)

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
           Q    +    T  +LLQ C    LL   K IH   ++     D +++  LI+MY K  ++
Sbjct: 19  QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
             A +VF++   + + SWN +I  +A  G  K+A  LF E+   GF P+ IT+ ++L AC
Sbjct: 79  LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138

Query: 815 KNSGLVEEGWKYFDS-MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            +   +E G K     +   Y   P +++   ++ + GK G L  A      +  + D  
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPR-DVV 195

Query: 874 IWGALLG 880
            +  +LG
Sbjct: 196 SYNTMLG 202


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 295/887 (33%), Positives = 460/887 (51%), Gaps = 77/887 (8%)

Query: 225  NSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
            NSD  V  +L   ++  GD   A +A   +  R    +++ +      G   +E  E + 
Sbjct: 316  NSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHG-HYEEAFEQYY 374

Query: 284  ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            ++   GV+        +L  C+   A   G  +H+ + + G   DV +  +L++ Y +C 
Sbjct: 375  QMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCG 434

Query: 344  DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            D+  A +LF+ +    D + WN II    R E    A+KL+++MQ    K    T + +L
Sbjct: 435  DLPRARELFNTMPK-RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLL 493

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
             AC    A+ +GK IH  +L+S ++SN  + N L++MY R   +  A  VF+  +     
Sbjct: 494  SACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR--- 550

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                                            DII+WN +++GH  HGSY+    L   M
Sbjct: 551  --------------------------------DIISWNSMIAGHAQHGSYEAAYKLFLEM 578

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            +  G  P+  + + VL        L+ GR+ H  I+ +GL  D+ +G +L++MY++   L
Sbjct: 579  KKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSL 638

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------ 631
            Q+A EVF ++++RN+++W ++I G+  +G    A ++  QM+ +  KP            
Sbjct: 639  QDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKAC 698

Query: 632  -----------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
                                   D    N+L+S YS  G   +A  +   M N     ++
Sbjct: 699  MSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNR----DI 754

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            ++W  +I+G  QN     +L+F  QMQ++ +  N  +  S+L  C     L+ GK +H  
Sbjct: 755  MSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAE 814

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             +K     D  V   LI MY+K G+L+ A+EVF     K + +WN MI  +A +G   +A
Sbjct: 815  IVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKA 874

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +  F+ + + G +PD  TFT++L+AC +SGLV EG + F S+ + + + PTIEHY C+V 
Sbjct: 875  LDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVG 934

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG   EA   I  MPF PDA +W  LLG+CRIHG++  AE A+    KL   N A 
Sbjct: 935  LLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAV 994

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y L+ N+ A + RW+DV ++R  M+  G++     SWI++D I+H F A    HP T EI
Sbjct: 995  YVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEI 1054

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y EL  L  EM++ GY PDT+ V  ++D+E +   L +H+E+LAI YGL+KT    PIR+
Sbjct: 1055 YEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRI 1114

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KN R+C DCHTA+K++S + GREI  RD  RFH F+ G+CSC D W
Sbjct: 1115 FKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 175/709 (24%), Positives = 323/709 (45%), Gaps = 75/709 (10%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSS 263
           R L+  K  HAQM++ G     D  + +L+ + Y++    + A + F     R    W+S
Sbjct: 96  RSLAEAKRIHAQMVEAG--VGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNS 153

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +  Y   G + ++  +++ E+   G I        IL  C        G ++H+ +I+ 
Sbjct: 154 LISCYAQQGFK-KKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEA 212

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G+  D  ++ +L+N YGKC D+ SA ++FS +    D + +N ++ +  +    E  I L
Sbjct: 213 GYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYR-RDVVSYNTMLGLYAQKAYVEECIGL 271

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F +M          T + +L A        EGK+IH   +   L S++ V   L +M+ R
Sbjct: 272 FGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVR 331

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              +  A +  ++  D ++  +N++I++                                
Sbjct: 332 CGDVAGAKQALEAFADRDVVVYNALIAALA------------------------------ 361

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
                 HG Y+        M+S G   N ++   VL A +  + L  G   H +I   G 
Sbjct: 362 -----QHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH 416

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D+ +G SL+ MY +   L  A+E+F+ M  R++++WN++I+GY  +     A K+  Q
Sbjct: 417 SSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQ 476

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN---------------- 667
           M+ E +KP  V++  L+S  +      +  +I   +  SGI  N                
Sbjct: 477 MQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGS 536

Query: 668 ---------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                          +++W S+I+G  Q+ +Y  + K F++M++E ++P+  T +S+L  
Sbjct: 537 IMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVG 596

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
           C     L+ G++IH L +++G   D  +   LI+MY + G+L+ A EVF    ++ + SW
Sbjct: 597 CKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSW 656

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS-MS 831
             MI GFA  G  ++A  LF ++   GF+P   TF+++L AC +S  ++EG K     ++
Sbjct: 657 TAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILN 716

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           + Y +   + +   ++    K+G + +A      MP + D   W  ++ 
Sbjct: 717 SGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMIA 762



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/616 (24%), Positives = 282/616 (45%), Gaps = 77/616 (12%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +++ CT+  +      +HA +++ G   D+ L   L+N Y KCR V  A+++F ++    
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPR-R 146

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + WN +I    +    + A +LF EMQ +       T + +L AC        GK+IH
Sbjct: 147 DVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIH 206

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             ++++  + +  V N L++MY +   L  A +VF  +   ++ S+N+M+  Y    YV+
Sbjct: 207 SKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVE 266

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
               LF +M+S  I PD +T+  LL                                   
Sbjct: 267 ECIGLFGQMSSEGIPPDKVTYINLL----------------------------------- 291

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A T   +L  G+  H   +  GL+ D+ VGT+L  M+V+   +  A++  +   +R++V
Sbjct: 292 DAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVV 351

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEI------------------------------ 629
            +N+LI+     G +  A +   QM  + +                              
Sbjct: 352 VYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHI 411

Query: 630 -----KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                  D+   NSL+S Y+  G    A  + + M       ++++W ++I+G  + E+ 
Sbjct: 412 SEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKR----DLISWNAIIAGYARREDR 467

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
            E++K + QMQ E +KP   T   LL  C       +GK IH   L++G   + ++A  L
Sbjct: 468 GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           ++MY + G++  A+ VF  +  + + SWN MI G A +G+ + A  LF E+ + G +PD 
Sbjct: 528 MNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
           ITF ++L  CKN   +E G +    +  +  +   +   + ++++  + G L +A++   
Sbjct: 588 ITFASVLVGCKNPEALELG-RQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFH 646

Query: 865 TMPFKPDATIWGALLG 880
           ++  + +   W A++G
Sbjct: 647 SLRHR-NVMSWTAMIG 661



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 168/659 (25%), Positives = 287/659 (43%), Gaps = 112/659 (16%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSR 256
           LN  +  + L + +  H+ + ++G   +SD  +  SLI  Y   GD   A + F     R
Sbjct: 392 LNACSTSKALGAGELIHSHISEVGH--SSDVQIGNSLISMYARCGDLPRARELFNTMPKR 449

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               W++ +  Y +   +  E ++++ ++  +GV         +L  CT   A+  G  +
Sbjct: 450 DLISWNAIIAGY-ARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H  +++ G   + HL  ALMN Y +C  +  A  +F E +   D + WN +I    ++  
Sbjct: 509 HEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVF-EGTRARDIISWNSMIAGHAQHGS 567

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
           +E A KLF EM+    +    T   +L  C    A   G+QIH  +++S L+ ++++ N 
Sbjct: 568 YEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNA 627

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+MY R   L+ A  VF S++  N+ SW +MI  +   G    A+ LF           
Sbjct: 628 LINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELF----------- 676

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
              W                      MQ+ GF+P  S+ S +L+A      L  G++   
Sbjct: 677 ---WQ---------------------MQNDGFKPVKSTFSSILKACMSSACLDEGKKVIA 712

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
           +IL +G + D  VG +L+  Y K+  + +A++VFD M NR+I++WN +I+GY   GL   
Sbjct: 713 HILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGT 772

Query: 617 AKKMLNQMEEE-----------------------------------EIKPDLVSWNSLVS 641
           A +   QM+E+                                   +++ D+    +L+S
Sbjct: 773 ALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALIS 832

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            Y+  G  +EA  +  +        NVVTW ++I+   Q+    ++L FF  M +E IKP
Sbjct: 833 MYAKCGSLEEAQEVFDNFTEK----NVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKP 888

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           + +T +S+L  C   GL+  G  I                     + S+ G         
Sbjct: 889 DGSTFTSILSACNHSGLVMEGNRI------------------FSSLESQHG--------- 921

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
               + T+  + C++      G  +EA  L +++    F PDA  +  LL AC+  G V
Sbjct: 922 ---LSPTIEHYGCLVGLLGRAGRFQEAETLINQM---PFPPDAAVWETLLGACRIHGNV 974



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 229/523 (43%), Gaps = 68/523 (13%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           V ++Q C +  +  E K+IH  ++++ +  ++ + N LI+MY +   +  A +VF  M  
Sbjct: 86  VDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPR 145

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            ++ SWNS+IS Y   G+   A+ LF +M                               
Sbjct: 146 RDVISWNSLISCYAQQGFKKKAFQLFEEM------------------------------- 174

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
               Q+ GF P+  +   +L A      L+YG++ H  I+  G   D  V  SL++MY K
Sbjct: 175 ----QTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGK 230

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
            + L +A++VF  +  R++V++N+++  Y  K        +  QM  E I PD V++ +L
Sbjct: 231 CEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINL 290

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYP-------------------------------NV 668
           +  ++      E   I     N G+                                 +V
Sbjct: 291 LDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDV 350

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           V + +LI+   Q+ +Y E+ + + QM+ + +  N TT  S+L  C     L  G+ IH  
Sbjct: 351 VVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSH 410

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             + G   D  +   LI MY++ G+L  ARE+F     + L SWN +I G+A   +  EA
Sbjct: 411 ISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEA 470

Query: 789 ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
           + L+ ++   G +P  +TF  LL+AC NS    +G    + +     I       + +++
Sbjct: 471 MKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMN 529

Query: 849 LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           +  + G + EA +       + D   W +++     HG  E A
Sbjct: 530 MYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEAA 571



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 8/309 (2%)

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           L NA +      NR   A+  L+     K     AK++  QM E  + PD+   N L++ 
Sbjct: 69  LSNAYQPRPTETNR--AAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINM 126

Query: 643 YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           Y       +A  +   M       +V++W SLIS   Q    +++ + F +MQ     P+
Sbjct: 127 YVKCRSVSDAHQVFLKMPRR----DVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS 182

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
             T  S+L  C     L+ GK+IH   ++ G+ +D  V   L++MY K  +L SAR+VF 
Sbjct: 183 KITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFS 242

Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
               + + S+N M+  +A     +E I LF ++   G  PD +T+  LL A     +++E
Sbjct: 243 GIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE 302

Query: 823 GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
           G K    ++ +  +   I   + +  +  + G +  A   +     + D  ++ AL+ + 
Sbjct: 303 G-KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADR-DVVVYNALIAAL 360

Query: 883 RIHGHLEYA 891
             HGH E A
Sbjct: 361 AQHGHYEEA 369


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/747 (36%), Positives = 419/747 (56%), Gaps = 66/747 (8%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D L  +  + +  +  + + A+ +   M     +  S     +LQ CA++ +  +G+++H
Sbjct: 60   DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              +LKS ++ N  + N L+SMY++   L  A RVFD ++D N+ SW +MI ++       
Sbjct: 120  AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A+  +  M  +  +PD +T+  LL+                                  
Sbjct: 180  EAYKCYETMKLAGCKPDKVTFVSLLN---------------------------------- 205

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A T   LL+ G++ H  I + GL+ +  VGTSL+ MY K   +  AQ +FD +  +N+V
Sbjct: 206  -AFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVV 264

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG---------------YS 644
             W  LI+GY  +G    A ++L +M++ E+ P+ +++ S++ G               Y 
Sbjct: 265  TWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYI 324

Query: 645  IW-GQSKEALV----IIHHMKNSGI-----------YPNVVTWTSLISGSLQNENYRESL 688
            I  G  +E  V    I  + K  G+           + +VVTWT++++G  Q   + E++
Sbjct: 325  IQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAI 384

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
              F +MQQ+ IKP+  T +S L +C     LQ GK IH   +  G+  D Y+ + L+ MY
Sbjct: 385  DLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMY 444

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
            +K G++  AR VF + + + + +W  MI G A +G  +EA+  F ++ + G +PD +TFT
Sbjct: 445  AKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFT 504

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            ++L+AC + GLVEEG K+F SM  DY I P +EHYSC VDLLG+AG+L+EA + I TMPF
Sbjct: 505  SVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPF 564

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            +P  ++WGALL +CRIH  +E  E A+  + KL+P +   Y  + N+ A + R+ED E++
Sbjct: 565  QPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKV 624

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R  M++  V      SWI++D  VHVF  E   HP   EIY EL  L  ++K+ GYVPDT
Sbjct: 625  RQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDT 684

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
            R V  D+DEE+K + L SH+E+LAI YGLMKT    PIR++KN RVC DCHTA+K++S V
Sbjct: 685  RFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKV 744

Query: 1049 RGREIFLRDGARFHHFREGECSCNDCW 1075
             GREI  RD  RFHHF +G CSC D W
Sbjct: 745  VGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  207 bits (526), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 261/589 (44%), Gaps = 110/589 (18%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G ++E L +   +  +G    S +   +L+ C +L +   G EVHA+++K G   + +L+
Sbjct: 75  GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L++ Y KC  +  A ++F  + D  + + W  +I   +   +   A K +  M+ +  
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRD-RNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGC 193

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           K    T V +L A         G+++H  + K+ LE    V   L+ MY++   +  A  
Sbjct: 194 KPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQV 253

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +FD + + N+ +W  +I+ Y   G VDVA  L  KM  + + P+ IT+            
Sbjct: 254 IFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITY------------ 301

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                  + +LQ  T    L++G++ H YI+++G   +++V  +
Sbjct: 302 -----------------------TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+ MY K   L+ A+++F ++ +R++V W ++++GY   G    A  +  +M+++ IKPD
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398

Query: 633 LVSWNS-----------------------------------LVSGYSIWGQSKEALVIIH 657
            +++ S                                   LVS Y+  G   +A ++ +
Sbjct: 399 KMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFN 458

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            M       NVV WT++I+G  Q+   RE+L++F QM+++ IKP+  T +S+L  C  +G
Sbjct: 459 QMSER----NVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514

Query: 718 LLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
           L++ G K    + L  G        +  +D+  ++G+L+ A  V                
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENV---------------- 558

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
                             +L   FQP    + ALL+AC+    VE G +
Sbjct: 559 ------------------ILTMPFQPGPSVWGALLSACRIHSDVERGER 589



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 133/566 (23%), Positives = 252/566 (44%), Gaps = 45/566 (7%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L E  + R L   +  HA ++K G I  +  +  +L+  Y + G  T A + F     R
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSG-IQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDR 160

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +   W++ +E + + G +  E  + +  +   G          +L   T      +G +V
Sbjct: 161 NIVSWTAMIEAFVA-GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKV 219

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H  + K G + +  +  +L+  Y KC D+  A  +F ++ + ++ + W  +I    +  +
Sbjct: 220 HMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPE-KNVVTWTLLIAGYAQQGQ 278

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            + A++L  +MQ +       T   +LQ C    A   GK++H Y+++S     + V N 
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+MY +   L+ A ++F  +   ++ +W +M++ Y  LG+ D A  LF +M    I+PD
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            +T+   L+                                   + +    L+ G+  H 
Sbjct: 399 KMTFTSALT-----------------------------------SCSSPAFLQEGKSIHQ 423

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
            ++  G   D+Y+ ++L+ MY K   + +A+ VF+ M  RN+VAW ++I+G    G    
Sbjct: 424 QLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCRE 483

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLI 675
           A +   QM+++ IKPD V++ S++S  +  G  +E       M  + GI P V  ++  +
Sbjct: 484 ALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFV 543

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
               +  +  E+    + M     +P  +   +LL  C     ++ G+      LK    
Sbjct: 544 DLLGRAGHLEEAENVILTM---PFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPD 600

Query: 736 KD-AYVATGLIDMYSKSGNLKSAREV 760
            D AYVA  L ++Y+ +G  + A +V
Sbjct: 601 DDGAYVA--LSNIYAAAGRYEDAEKV 624


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 291/871 (33%), Positives = 453/871 (52%), Gaps = 103/871 (11%)

Query: 272  GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
             G ++E +++ G +  +G++  S     I++ C KL  F  G  VH  L + G   D++L
Sbjct: 56   AGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYL 115

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
              +L+NFY K  DV S  ++F  ++ L D + W+ +I     N     A   F  M+ ++
Sbjct: 116  GNSLINFYSKFGDVASVEQVFRRMT-LRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
             +    T + +L+AC       + ++IH  V  S +E++++V   LI+MYS+  ++ LA 
Sbjct: 175  IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             +F  MK+ N+ SW ++I +      ++ A+ L+ KM  + I P+ +T+  LL+   T  
Sbjct: 235  EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT-- 292

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                              P                 L  GR  H +I   GL+ D+ V  
Sbjct: 293  ------------------PEA---------------LNRGRRIHSHISERGLETDVVVAN 319

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL-----FVNAKKMLNQMEE 626
            +L+ MY K +C+Q+A+E FD M  R++++W+++I+GY   G           ++L +M  
Sbjct: 320  ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR 379

Query: 627  EEIKPDLVSWNSLVSGYSIWG--------------------QSKEALVIIHHMKNSGIY- 665
            E + P+ V++ S++   S+ G                    +S +  +   + K   IY 
Sbjct: 380  EGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYE 439

Query: 666  ----------PNVVTWTSL-------------------------------ISGSLQNENY 684
                       NVV W SL                               I+G  Q+ + 
Sbjct: 440  AEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDI 499

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             +  +    M+ E  +P+  T+ S+L+ CG L  L+ GK +H   +K G   D  VAT L
Sbjct: 500  AKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSL 559

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            I MYSK G +  AR VF K +N+   +WN M+ G+  +G G EA+ LF  +L+    P+ 
Sbjct: 560  IGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNE 619

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            ITFTA+++AC  +GLV+EG + F  M  D+ + P  +HY CMVDLLG+AG L EA +FI+
Sbjct: 620  ITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQ 679

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP +PD ++W ALLG+C+ H +++ AE A+  + +LEP N++ Y  + N+ A + RW+D
Sbjct: 680  RMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDD 739

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
              ++R  MD+ G+K     S I+ID  +H F AE   HP    I+ EL  L  EMK+ GY
Sbjct: 740  STKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGY 799

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PD R V  D+DE +K + L  H+EKLAI YGL+KT    PIR++KN RVC DCHTA K+
Sbjct: 800  TPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKF 859

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S +R REI  RD  RFH+F+ G CSC D W
Sbjct: 860  ISKIRKREIVARDANRFHYFKNGTCSCGDFW 890



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 209/476 (43%), Gaps = 46/476 (9%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFS 255
            LN  N    L+  +  H+ + + G    +D +V  +LI  Y +      A + F     
Sbjct: 286 LLNSCNTPEALNRGRRIHSHISERG--LETDVVVANALITMYCKCNCIQDARETFDRMSK 343

Query: 256 RSYADWSSFLEDYESFGGE----VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFW 311
           R    WS+ +  Y   G +    + E+ ++   +  +GV         ILK C+   A  
Sbjct: 344 RDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALE 403

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
            G ++HA + K GF+ D  L+ A+ N Y KC  +  A ++FS++ + ++ + W  ++ + 
Sbjct: 404 QGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN-KNVVAWASLLTMY 462

Query: 372 LRNEKWENAIKLFREMQ-------------FSSAKAISR------------------TIV 400
           ++     +A K+F EM              ++ +  I++                  TI+
Sbjct: 463 IKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTII 522

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +L+AC  + A   GK +H   +K  LES+  V   LI MYS+  ++  A  VFD + + 
Sbjct: 523 SILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR 582

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           +  +WN+M++ Y   G    A  LF +M   R+ P+ IT+  ++S     G  Q    + 
Sbjct: 583 DTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIF 642

Query: 521 RGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
           R MQ     +P       ++  +     L+   E+  +I R   + D+ V  +L+     
Sbjct: 643 RIMQEDFRMKPGKQHYGCMVDLLGRAGRLQ---EAEEFIQRMPCEPDISVWHALLGACKS 699

Query: 580 NDCLQNAQEVFDN---MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           +D +Q A+    +   ++  N   + +L + Y   G + ++ K+   M+++ +K D
Sbjct: 700 HDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKD 755


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
            [Vitis vinifera]
          Length = 785

 Score =  518 bits (1333), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 286/812 (35%), Positives = 432/812 (53%), Gaps = 76/812 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+ C +  +     ++H   +K   + D  +   L   Y  C  V  A +LF E+ +  
Sbjct: 14   LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-P 72

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
              +LWN+II     N  ++ AI L+  M     +    T   +L+AC+ + A  +G +IH
Sbjct: 73   SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             +     LES++ VC  L+  Y++   L  A R+F SM                      
Sbjct: 133  SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS--------------------- 171

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            D++ WN +++G   +G   + + L+  MQ  G  PN S++  VL
Sbjct: 172  --------------HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
              V E + L +G+  HGY +R   D  + VGT L+DMY K  CL  A+++FD M  RN V
Sbjct: 218  PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKP--------------------------- 631
            +W+++I GY        A ++ +QM  ++ + P                           
Sbjct: 278  SWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337

Query: 632  --------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                    D++  N+L+S Y+  G   +A+     M       + V++++++SG +QN N
Sbjct: 338  IIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPK----DSVSFSAIVSGCVQNGN 393

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
               +L  F  MQ   I P+ TTM  +L  C  L  LQ+G   H   +  GF  D  +   
Sbjct: 394  AAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNA 453

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            LIDMYSK G +  AREVF +     + SWN MI+G+ I+G G EA+ LFH+LL  G +PD
Sbjct: 454  LIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPD 513

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             ITF  LL++C +SGLV EG  +FD+MS D++I+P +EH  CMVD+LG+AG +DEA  FI
Sbjct: 514  DITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI 573

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
            R MPF+PD  IW ALL +CRIH ++E  E  S+++  L P ++ N+ L+ N+ + + RW+
Sbjct: 574  RNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWD 633

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            D   +R +  + G+K +   SWI+I+ IVH F      H    +I  +L  L+ EMK+LG
Sbjct: 634  DAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 693

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            Y  +   V+QD++EEEK ++LL H+EKLAI +G++  K+  PI V KN RVC DCHTA K
Sbjct: 694  YQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIK 753

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +M+L+  REI +RD  RFHHF+ G C+C D W
Sbjct: 754  FMTLITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 237/524 (45%), Gaps = 79/524 (15%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           + +L+AC +  +  E K+IH + LK+   ++ SV + L  +Y   N++ LA R+FD + +
Sbjct: 12  LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            ++  WN +I +Y                           WN         G +   + L
Sbjct: 72  PSVILWNQIIRAY--------------------------AWN---------GPFDGAIDL 96

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M  LG RPN  +   VL+A + L  ++ G E H +    GL+ D++V T+L+D Y K
Sbjct: 97  YHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAK 156

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--- 636
              L  AQ +F +M +R++VAWN++I+G    GL  +A +++ QM+EE I P+  +    
Sbjct: 157 CGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGV 216

Query: 637 --------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYP--NV 668
                                     N +V G  +     +   +++  K   +    N 
Sbjct: 217 LPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNE 276

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           V+W+++I G + ++  +E+L+ F QM  +D + P   T+ S+L+ C  L  L  G+++HC
Sbjct: 277 VSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHC 336

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
             +K G + D  +   L+ MY+K G +  A   F +   K   S++ ++ G    GN   
Sbjct: 337 YIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAV 396

Query: 788 AILLFHELLETGFQPDAITFTALLAACKN-----SGLVEEGWKYFDSMSTDYNIIPTIEH 842
           A+ +F  +  +G  PD  T   +L AC +      G    G+      +TD  I      
Sbjct: 397 ALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLIC----- 451

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            + ++D+  K G +  A +    M  + D   W A++    IHG
Sbjct: 452 -NALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 162/709 (22%), Positives = 277/709 (39%), Gaps = 149/709 (21%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           + L+  K  H   +K     N+D  V   L   YL       A + F    + S   W+ 
Sbjct: 22  KSLTEAKKIHQHFLK--NTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQ 79

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +  Y ++ G     ++++  +   GV         +LK C+ L+A   GVE+H+     
Sbjct: 80  IIRAY-AWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMF 138

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G + DV +  AL++FY KC  +  A +LFS +S   D + WN +I         ++A++L
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQL 197

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
             +MQ       S TIV +L    +  A   GK +HGY ++ + ++ + V   L+ MY++
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              L  A ++FD M   N  SW++MI  Y     +  A  LF++M    I  D       
Sbjct: 258 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQM----ILKD------- 306

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
                                     P   ++  VL+A  +L  L  GR+ H YI++ G 
Sbjct: 307 -----------------------AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGS 343

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D+ +G +L+ MY K   + +A   FD M  ++ V++++++SG    G    A  +   
Sbjct: 344 VLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRM 403

Query: 624 MEEEEIKPDLVSW-----------------------------------NSLVSGYSIWGQ 648
           M+   I PDL +                                    N+L+  YS  G+
Sbjct: 404 MQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGK 463

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
              A  + + M       ++V+W ++I G   +    E+L  F  +    +KP+  T   
Sbjct: 464 ISFAREVFNRMDRH----DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519

Query: 709 LLQTCGGLGLLQNG---------------KEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           LL +C   GL+  G               +  HC+C              ++D+  ++G 
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCIC--------------MVDILGRAGL 565

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           +  A    R                                     F+PD   ++ALL+A
Sbjct: 566 IDEAHHFIRNMP----------------------------------FEPDVRIWSALLSA 591

Query: 814 C---KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
           C   KN  L EE  K   S+  +     +  ++  + ++   AG  D+A
Sbjct: 592 CRIHKNIELGEEVSKKIQSLGPE-----STGNFVLLSNIYSAAGRWDDA 635


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 300/966 (31%), Positives = 487/966 (50%), Gaps = 81/966 (8%)

Query: 148  HFNTRTSINQNRHSHK-PNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRC 206
            +FN R+  N+  HSH   +  T +    A+     L +Q            L    + + 
Sbjct: 98   YFNGRSKANK-LHSHTYKDERTITGKDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKD 156

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF--FLYFSRSYADWSSF 264
            L + +  H  +I+   + +    V +LI  Y++ G    A + +    +  R+   W++ 
Sbjct: 157  LVAGREVHEHIIQHCTVLDQY-TVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAM 215

Query: 265  LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
            +  Y  +G  ++E L++  E+   G+         +L  C    A   G E+H   +K  
Sbjct: 216  VVGYVQYG-YIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274

Query: 325  FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
              FDV++   ++N Y KC  +  A ++F ++ + +  + W  II         E A ++F
Sbjct: 275  LLFDVNVANCILNMYAKCGSIHEAREVFDKM-ETKSVVSWTIIIGGYADCGHSEIAFEIF 333

Query: 385  REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            ++MQ         T + +L A +   A   GK +H ++L +  ES+L+V   L+ MY++ 
Sbjct: 334  QKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKC 393

Query: 445  NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
               +   +VF+ +                                   +  D+I WN ++
Sbjct: 394  GSYKDCRQVFEKL-----------------------------------VNRDLIAWNTMI 418

Query: 505  SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
             G    G+++    +   MQ  G  PN  +  ++L A      L +GRE H  ++++G  
Sbjct: 419  GGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM 478

Query: 565  YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            +D+ V  +L+ MY +   +++A+ +F+ M  ++I++W ++I G    GL   A  +   M
Sbjct: 479  FDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDM 538

Query: 625  EEEEIKPDLVSW-----------------------------------NSLVSGYSIWGQS 649
            ++  +KP+ V++                                   N+LV+ YS+ G  
Sbjct: 539  QQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSV 598

Query: 650  KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
            K+A  +   M       ++V + ++I G   +   +E+LK F ++Q+E +KP+  T  ++
Sbjct: 599  KDARQVFDRMTQR----DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINM 654

Query: 710  LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            L  C   G L+  KEIH L LK+G++ D  +   L+  Y+K G+   A  VF K   + +
Sbjct: 655  LNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNV 714

Query: 770  ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS 829
             SWN +I G A +G G++ + LF  +   G +PD +TF +LL+AC ++GL+EEG +YF S
Sbjct: 715  ISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCS 774

Query: 830  MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLE 889
            MS D+ I PTIEHY CMVDLLG+AG LDE    I+TMPF+ +  IWGALLG+CRIHG++ 
Sbjct: 775  MSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVP 834

Query: 890  YAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQID 949
             AE A+    KL+P N+A Y  + ++ A +  W+   +LR  M++ GV      SWI++ 
Sbjct: 835  VAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVG 894

Query: 950  QIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTE 1009
              +H F AE   HP + +IY EL  L   MK  GYVPDTR V  D+DE EK   +  H+E
Sbjct: 895  DKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSE 954

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            +LAI YGL+ T    PIR+ KN RVC DCHTA K+++ +  REI  RD  RFHHF++G C
Sbjct: 955  RLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVC 1014

Query: 1070 SCNDCW 1075
            SC D W
Sbjct: 1015 SCGDYW 1020


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 307/961 (31%), Positives = 475/961 (49%), Gaps = 106/961 (11%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            HAQ+I  G  +     +  LI  Y  F     A   F    + S   W+S +  Y +   
Sbjct: 52   HAQIIVSG--FKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAY-TRSK 108

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
            +  E LE++  +  KG+       T +LK CT  +    GV  H  + +RG + DV +  
Sbjct: 109  QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
             L++ Y K  D++ A ++F ++    D + WN +I    ++E    A+  FR MQ    +
Sbjct: 169  GLVDMYSKMGDLKRAREVFDKMPK-RDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
              S +++ +     K+      + IHGYV +    S  +V N LI +YS+   +++A RV
Sbjct: 228  PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRV 285

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN------------------------ 489
            FD M D +  SW +M++ Y   G       LF+KM                         
Sbjct: 286  FDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL 345

Query: 490  -----------SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF---------- 528
                         RI  DI+    L+  +   G  +    L  G+Q              
Sbjct: 346  EKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAAL 405

Query: 529  ---------------------RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                                 +PN  ++  +L A  +L LLK G+  H + ++  +D DL
Sbjct: 406  VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL 465

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
              GT+L+ MY K      A   F+ M +R+IV WNSLI+GY   G   NA  M  ++   
Sbjct: 466  STGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLS 525

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIH------------HMKNS--------GIYPN 667
             I PD  +   +V   ++     +    IH            H+KN+        G  P+
Sbjct: 526  AINPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584

Query: 668  V-------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
                          VTW  +I+  +QN + +E++  F QM+ E+  PNS T  S+L    
Sbjct: 585  AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             L   + G   H   ++ GF+ +  V   LIDMY+K G L  + ++F +  +K   SWN 
Sbjct: 645  YLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNA 704

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            M+ G+A++G+G  AI LF  + E+  Q D+++F ++L+AC+++GLVEEG K F SMS  Y
Sbjct: 705  MLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKY 764

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
            +I P +EHY+CMVDLLG+AG  DE   FI+ MP +PDA +WGALLGSCR+H +++  E+A
Sbjct: 765  HIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVA 824

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
               L KLEP N A++ ++ ++ A S RW D  + R  M+++G+K     SW+++   VH 
Sbjct: 825  LDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHA 884

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP    ++     L+ +M+K+GYVPD  CV Q+++EE+K   L SH+E+LAI 
Sbjct: 885  FRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAIT 944

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            + L+ T   + I+++KN RVC+DCHT  K++S +  R I +RD  RFHHF +G CSCND 
Sbjct: 945  FALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDY 1004

Query: 1075 W 1075
            W
Sbjct: 1005 W 1005



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/624 (24%), Positives = 273/624 (43%), Gaps = 80/624 (12%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           +++HA +I  GF    H    L+N Y      + A  +F    +    +LWN +I    R
Sbjct: 49  LQIHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPN-PSRILWNSMIRAYTR 106

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           ++++  A++++  M     +    T   +L+AC       EG   HG + +  LE ++ +
Sbjct: 107 SKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              L+ MYS+   L+ A  VFD M   ++ +WN+MI+   GL              S   
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIA---GL--------------SQSE 209

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            P      C              +   R MQ +G  P+  S+  +   + +L  ++  R 
Sbjct: 210 DP------C------------EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRS 251

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HGY+ R   D+   V   L+D+Y K   +  A+ VFD M +++ V+W ++++GY   G 
Sbjct: 252 IHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309

Query: 614 FVNAKKMLNQME-----------------------------------EEEIKPDLVSWNS 638
           FV   ++ ++M+                                   ++ I  D++    
Sbjct: 310 FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           L+  Y+  G++++A  +   ++      ++V W+++I+  +Q     E+L  F +MQ + 
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGR----DLVAWSAIIAALVQTGYPEEALSLFQEMQNQK 425

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           +KPN  T+ S+L  C  L LL+ GK IHC  +K     D    T L+ MY+K G   +A 
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAAL 485

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             F + +++ + +WN +I G+A  G+   AI +F++L  +   PDA T   ++ AC    
Sbjct: 486 TTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545

Query: 819 LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            +++G      +             + ++D+  K G L  A        F  D   W  +
Sbjct: 546 DLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVI 604

Query: 879 LGSCRIHGHLEYAEIASRRLFKLE 902
           + +   +GH + A I+S    +LE
Sbjct: 605 IAAYMQNGHAKEA-ISSFHQMRLE 627



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 14/217 (6%)

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           LL +C  L  L    +IH   + +GF K  +  T LI++YS       AR VF  + N +
Sbjct: 38  LLSSCKHLNPLL---QIHAQIIVSGF-KHHHSITHLINLYSLFHKCDLARSVFDSTPNPS 93

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-WKY- 826
              WN MI  +       EA+ +++ ++E G +PD  TFT +L AC  +  ++EG W + 
Sbjct: 94  RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 827 -FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL-GSCRI 884
             D    + ++       + +VD+  K G L  A +    MP K D   W A++ G  + 
Sbjct: 154 EIDRRGLERDVFIG----AGLVDMYSKMGDLKRAREVFDKMP-KRDVVAWNAMIAGLSQS 208

Query: 885 HGHLEYAE-IASRRLFKLEPCNSANYNLMMNLLAMSN 920
               E  +   S +L  +EP + +  NL   +  +SN
Sbjct: 209 EDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 309/930 (33%), Positives = 484/930 (52%), Gaps = 69/930 (7%)

Query: 179  TDTLAKQA--QLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH 236
            TD  A Q+  Q S   +    L      + LS  +  HA MI    ++NS  +   L+F 
Sbjct: 64   TDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFM 123

Query: 237  YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
            Y + G    A K F     ++   W++ +  Y +  GE    LE++ E+   G+   +  
Sbjct: 124  YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVT-NGEPLGSLELYREMRVSGIPLDACT 182

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
               ILK C  L     G EVH   IK G+   V +  +++  Y KC D+  A +LF  + 
Sbjct: 183  FPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMP 242

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            + ED + WN +I     N +   A++LF EMQ +S    + T V  LQAC       +G 
Sbjct: 243  EKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM 302

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
             IH  VLKS+   N+ V N LI+MY+R  K+  A  +F     +N+  W           
Sbjct: 303  FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF-----YNMDDW----------- 346

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                               D I+WN +LSG   +G Y   L     M+  G +P+  +V 
Sbjct: 347  -------------------DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVI 387

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             ++ A        +G + H Y ++NGLD DL VG SL+DMY K   ++    +FD M ++
Sbjct: 388  SIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK 447

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---SGYSIWGQSKE-- 651
            ++V+W ++I+G+   G    A ++  +++ E I  D++  +S++   SG  +    KE  
Sbjct: 448  DVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIH 507

Query: 652  ALVIIHHMKN----SGI---------------------YPNVVTWTSLISGSLQNENYRE 686
            + +I   + +    +GI                     + +VV+WTS+IS  + N    E
Sbjct: 508  SYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANE 567

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +L+ F  M++  ++P+S ++ S+L     L  L+ GKEIH   ++ GF+ +  +A+ L+D
Sbjct: 568  ALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVD 627

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY++ G L+ +R VF    NK L  W  MI  + ++G G+ AI LF  + +    PD I 
Sbjct: 628  MYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIA 687

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F A+L AC +SGL+ EG ++ +SM  +Y + P  EHY+C+VDLLG+A +L+EA+ F++ M
Sbjct: 688  FVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGM 747

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              +P A +W ALLG+C+IH + E  EIA+++L +++P N  NY L+ N+ +   RW+DVE
Sbjct: 748  EVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVE 807

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM-KKLGYV 985
             +R  M   G+K     SWI++   VH F A    HP + EIY +L  +  ++ K+ GYV
Sbjct: 808  XVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYV 867

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
              T+ V  +  EEEK ++L  H+E+LAI YG++ T   A +R+ KN RVC DCH   K +
Sbjct: 868  AQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLI 927

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S    RE+ +RD  RFHHF+ G CSC D W
Sbjct: 928  SKFFERELVMRDANRFHHFKGGVCSCGDVW 957


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 312/976 (31%), Positives = 479/976 (49%), Gaps = 112/976 (11%)

Query: 205  RCLSSVK------SKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSY 258
            R LSS K        HAQ+I  G  +     +  LI  Y  F     A   F    + S 
Sbjct: 37   RLLSSCKHLNPLLQIHAQIIVSG--FKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSR 94

Query: 259  ADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
              W+S +  Y +   +  E LE++  +  KG+       T +LK CT  +    GV  H 
Sbjct: 95   ILWNSMIRAY-TRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 319  SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
             + +RG + DV +   L++ Y K  D++ A ++F ++    D + WN +I    ++E   
Sbjct: 154  EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK-RDVVAWNAMIAGLSQSEDPC 212

Query: 379  NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
             A+  FR MQ    +  S +++ +     K+      + IHGYV +    S  +V N LI
Sbjct: 213  EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLI 270

Query: 439  SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN--------- 489
             +YS+   +++A RVFD M D +  SW +M++ Y   G       LF+KM          
Sbjct: 271  DLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV 330

Query: 490  --------------------------SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                                        RI  DI+    L+  +   G  +    L  G+
Sbjct: 331  SAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL 390

Query: 524  QSLGF-------------------------------RPNGSSVSVVLQAVTELRLLKYGR 552
            Q                                   +PN  ++  +L A  +L LLK G+
Sbjct: 391  QGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGK 450

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
              H + ++  +D DL  GT+L+ MY K      A   F+ M +R+IV WNSLI+GY   G
Sbjct: 451  SIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH------------HMK 660
               NA  M  ++    I PD  +   +V   ++     +    IH            H+K
Sbjct: 511  DPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVK 569

Query: 661  NS--------GIYPNV-------------VTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            N+        G  P+              VTW  +I+  +QN + +E++  F QM+ E+ 
Sbjct: 570  NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
             PNS T  S+L     L   + G   H   ++ GF+ +  V   LIDMY+K G L  + +
Sbjct: 630  HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEK 689

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            +F +  +K   SWN M+ G+A++G+G  AI LF  + E+  Q D+++F ++L+AC++ GL
Sbjct: 690  LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGL 749

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            VEEG K F SMS  Y+I P +EHY+CMVDLLG+AG  DE   FI+ MP +PDA +WGALL
Sbjct: 750  VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
            GSCR+H +++  E+A   L KLEP N A++ ++ ++ A S RW D  + R  M+++G+K 
Sbjct: 810  GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKK 869

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
                SW+++   VH F      HP    ++     L+ +M+K+GYVPD  CV Q+++EE+
Sbjct: 870  TPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED 929

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K   L SH+E+LAI + L+ T   + I+++KN RVC+DCHT  K++S +  R I +RD  
Sbjct: 930  KEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDAT 989

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF +G CSCND W
Sbjct: 990  RFHHFEDGICSCNDYW 1005


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 285/871 (32%), Positives = 451/871 (51%), Gaps = 103/871 (11%)

Query: 272  GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
             G ++E +++ G +  +G++  S     +++ C K   F  G  VH  L + G + D++L
Sbjct: 34   AGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYL 93

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
              +L+NFY K  DV SA ++F  ++ L D + W+ +I     N     A   F  M  ++
Sbjct: 94   GNSLINFYSKFEDVASAEQVFRRMT-LRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
             +    T + +L+AC       +G++IH  V    +E++++V   LI+MYS+  ++ +A 
Sbjct: 153  IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             VF  M + N+ SW ++I +      ++ A+ L+ +M  + I P+ +T+  LL+   T  
Sbjct: 213  EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNT-- 270

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                              P                 L  GR  H +I   GL+ D+ V  
Sbjct: 271  ------------------PEA---------------LNRGRRIHSHISERGLETDMIVAN 297

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL-----FVNAKKMLNQMEE 626
            +L+ MY K + +Q A+E+FD M  R++++W+++I+GY   G           ++L +M  
Sbjct: 298  ALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357

Query: 627  EEIKPDLVSWNSLVSGYSIWG--------------------QSKEALVIIHHMKNSGIY- 665
            E + P+ V++ S++   +  G                    +S +  +   + K   IY 
Sbjct: 358  EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYE 417

Query: 666  ----------PNVVTWTS-------------------------------LISGSLQNENY 684
                       NVV WTS                               +I+G  QN + 
Sbjct: 418  AEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDI 477

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             +  +    M+ E  +P+  T+ ++L+ CG L  L+ GK +H   +K G   D  VAT L
Sbjct: 478  VKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSL 537

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            I MYSK G +  AR VF K +N+   +WN M+ G+  +G+G EA+ LF  +L+    P+ 
Sbjct: 538  IGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNE 597

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            IT TA+++AC  +GLV+EG + F  M  D+ + P  +HY CMVDLLG+AG L EA +FI+
Sbjct: 598  ITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQ 657

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            +MP +PD ++W ALLG+C+ H +++ AE A+  + +LEP  ++ Y  + N+ A + RW+D
Sbjct: 658  SMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDD 717

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
              ++R  MD+ G+K     S I+ID  +H F AE   HP    I+ EL  L  EMK+ GY
Sbjct: 718  STKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGY 777

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PD R V  D+D+ +K K L  H+EKLAI YGL+KT S  PIR++KN RVC DCHTA K+
Sbjct: 778  TPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKF 837

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S +R REI  RD  RFH+F  G CSC D W
Sbjct: 838  ISKIRKREIVARDANRFHYFNNGTCSCGDFW 868


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 268/740 (36%), Positives = 417/740 (56%), Gaps = 67/740 (9%)

Query: 368  IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
            + V  +  + + A+ +   M     +  S     +LQ CA++ +  +G+++H  +LKS +
Sbjct: 19   VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            + N  + N L+SMY++   L  A RVFDS++D N+ SW +MI ++        A+  +  
Sbjct: 79   QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            M  +  +PD +T+  LL+                                   A T   L
Sbjct: 139  MKLAGCKPDKVTFVSLLN-----------------------------------AFTNPEL 163

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L+ G++ H  I+  GL+ +  VGTSL+ MY K   +  A+ +FD +  +N+V W  LI+G
Sbjct: 164  LQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAG 223

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG---------------YSIW-GQSKE 651
            Y  +G    A ++L  M++ E+ P+ +++ S++ G               Y I  G  +E
Sbjct: 224  YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE 283

Query: 652  ALV----IIHHMKNSGI-----------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
              V    I  + K  G+           + +VVTWT++++G  Q   + E++  F +MQQ
Sbjct: 284  LWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            + IKP+  T +S+L +C     LQ GK IH   +  G+  D Y+ + L+ MY+K G++  
Sbjct: 344  QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDD 403

Query: 757  AREVFRKSANKTLASWNCMIMGF-AIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            A  VF + + + + +W  +I G  A +G  +EA+  F ++ + G +PD +TFT++L+AC 
Sbjct: 404  ASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACT 463

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + GLVEEG K+F SM  DY I P +EHYSC VDLLG+AG+L+EA + I +MPF P  ++W
Sbjct: 464  HVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVW 523

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
            GALL +CR+H  +E  E A+  + KL+P +   Y  + ++ A + R+ED E++R  M++ 
Sbjct: 524  GALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKR 583

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
             V      SWI++D  VHVF  E   HP + +IY EL  L  ++K++GYVPDTR V  D+
Sbjct: 584  DVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDV 643

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            DEE+K ++L SH+E+LAI YGLMKT    PIR++KN RVC DCHTA K++S V GREI  
Sbjct: 644  DEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIA 703

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHF +G CSC D W
Sbjct: 704  RDAQRFHHFADGVCSCGDFW 723



 Score =  200 bits (509), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/590 (23%), Positives = 260/590 (44%), Gaps = 111/590 (18%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G ++E L +   +  +G    S +   +L+ C +L +   G EVHA+++K G   + +L+
Sbjct: 26  GRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 85

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L++ Y KC  +  A ++F  + D  + + W  +I   +   K   A K +  M+ +  
Sbjct: 86  NTLLSMYAKCGSLTDARRVFDSIRD-RNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGC 144

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           K    T V +L A         G+++H  ++++ LE    V   L+ MY++   +  A  
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARV 204

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +FD + + N+ +W  +I+ Y   G VDVA  L   M  + + P+ IT+            
Sbjct: 205 IFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITF------------ 252

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                  + +LQ  T    L++G++ H YI+++G   +L+V  S
Sbjct: 253 -----------------------ASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+ MY K   L+ A+++F ++ +R++V W ++++GY   G    A  +  +M+++ IKPD
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPD 349

Query: 633 LVSWNS-----------------------------------LVSGYSIWGQSKEALVIIH 657
            +++ S                                   LVS Y+  G   +A ++ +
Sbjct: 350 KMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFN 409

Query: 658 HMKNSGIYPNVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            M       NVV WT++I+G   Q+   RE+L++F QM+++ IKP+  T +S+L  C  +
Sbjct: 410 QMSER----NVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465

Query: 717 GLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
           GL++ G K    + L  G        +  +D+  ++G+L+ A  V               
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENV--------------- 510

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
                              +L   F P    + ALL+AC+    VE G +
Sbjct: 511 -------------------ILSMPFIPGPSVWGALLSACRVHSDVERGER 541



 Score =  182 bits (463), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 257/573 (44%), Gaps = 58/573 (10%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L E  + R L   +  HA ++K G I  +  +  +L+  Y + G  T A + F     R
Sbjct: 53  LLQECARLRSLEQGREVHAAILKSG-IQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDR 111

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +   W++ +E + + G +  E  + +  +   G          +L   T      LG +V
Sbjct: 112 NIVSWTAMIEAFVA-GNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKV 170

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H  +++ G + +  +  +L+  Y KC D+  A  +F  + + ++ + W  +I    +  +
Sbjct: 171 HMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPE-KNVVTWTLLIAGYAQQGQ 229

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            + A++L   MQ +       T   +LQ C    A   GK++H Y+++S     L V N 
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+MY +   LE A ++F  +   ++ +W +M++ Y  LG+ D A +LF +M    I+PD
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPD 349

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            +T+                                   + VL + +    L+ G+  H 
Sbjct: 350 KMTF-----------------------------------TSVLTSCSSPAFLQEGKRIHQ 374

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK-GLFV 615
            ++  G + D+Y+ ++L+ MY K   + +A  VF+ M  RN+VAW ++I+G C + G   
Sbjct: 375 QLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCR 434

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSL 674
            A +  +QM+++ IKPD V++ S++S  +  G  +E       M  + GI P V  ++  
Sbjct: 435 EALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCF 494

Query: 675 I-----SGSLQN-ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           +     +G L+  EN   S+ F          P  +   +LL  C     ++ G+     
Sbjct: 495 VDLLGRAGHLEEAENVILSMPFI---------PGPSVWGALLSACRVHSDVERGERAAEN 545

Query: 729 CLKNGFIKD-AYVATGLIDMYSKSGNLKSAREV 760
            LK     D AYVA  L  +Y+ +G  + A +V
Sbjct: 546 VLKLDPDDDGAYVA--LSSIYAAAGRYEDAEKV 576


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/759 (34%), Positives = 419/759 (55%), Gaps = 74/759 (9%)

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F++     + ++W E I+  ++N  W  A++L+ +MQ +         + +++AC     
Sbjct: 76   FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               G+++H  ++    ES++ V   L SMY++   LE A +V                  
Sbjct: 136  LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQV------------------ 177

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                         F++M     + D+++WN +++G+  +G     L L   MQ  G +PN
Sbjct: 178  -------------FDRMP----KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPN 220

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             S++  V+     L  L+ G++ H Y +R+G++ D+ V   L++MY K   +  A ++F+
Sbjct: 221  SSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFE 280

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--------------- 636
             M  R++ +WN++I GY        A    N+M+   IKP+ ++                
Sbjct: 281  RMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQ 340

Query: 637  --------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                                N+LV+ Y+  G    A  +   M       NVV W ++IS
Sbjct: 341  GQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK----NVVAWNAIIS 396

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G  Q+ +  E+L  FI+MQ + IKP+S  + S+L  C     L+ GK+IH   +++GF  
Sbjct: 397  GYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFES 456

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            +  V TGL+D+Y+K GN+ +A+++F +   + + SW  MI+ + I+G+G++A+ LF ++ 
Sbjct: 457  NVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQ 516

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
            ETG + D I FTA+L AC ++GLV++G +YF  M +DY + P +EHY+C+VDLLG+AG+L
Sbjct: 517  ETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHL 576

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
            DEA   I+ M  +PDA +WGALLG+CRIH ++E  E A++ LF+L+P N+  Y L+ N+ 
Sbjct: 577  DEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIY 636

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A + RWEDV +LR  M E GVK     S + + + V  F      HP + +IY  L  L 
Sbjct: 637  AEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILY 696

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
             +M+K GYVP+T    QD++EE K  +L SH+EKLAI +G++ T    PIR++KN RVCS
Sbjct: 697  EQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCS 756

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            DCH A K++S + GREI +RD  RFHH + G CSC D W
Sbjct: 757  DCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  209 bits (533), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 245/509 (48%), Gaps = 44/509 (8%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L + +  H  +I  G  + SD +V  +L   Y + G   +A + F     R    W++ +
Sbjct: 136 LQAGRKVHEDIIARG--FESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAII 193

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             Y S  G+  E L ++ E+   G+   S  L  ++ +C  L+A   G ++H   I+ G 
Sbjct: 194 AGY-SQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI 252

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           + DV +   L+N Y KC +V +A+KLF E   + D   WN II     N +   A+  F 
Sbjct: 253 ESDVLVVNGLVNMYAKCGNVNTAHKLF-ERMPIRDVASWNAIIGGYSLNSQHHEALAFFN 311

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            MQ    K  S T+V +L ACA + A  +G+QIHGY ++S  ESN  V N L++MY++  
Sbjct: 312 RMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCG 371

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            +  A ++F+ M   N+ +WN++IS Y+  G+   A +LF +M +  I+PD         
Sbjct: 372 NVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSF------- 424

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
                                       ++  VL A      L+ G++ HGY +R+G + 
Sbjct: 425 ----------------------------AIVSVLPACAHFLALEQGKQIHGYTIRSGFES 456

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           ++ VGT L+D+Y K   +  AQ++F+ M  +++V+W ++I  Y   G   +A  + ++M+
Sbjct: 457 NVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQ 516

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENY 684
           E   K D +++ ++++  S  G   + L     MK+  G+ P +  +  L+    +  + 
Sbjct: 517 ETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHL 576

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            E+      M    ++P++    +LL  C
Sbjct: 577 DEANGIIKNM---SLEPDANVWGALLGAC 602



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 259/574 (45%), Gaps = 85/574 (14%)

Query: 279 LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
           L ++ ++   G+     +   ++K C        G +VH  +I RGF+ DV +  AL + 
Sbjct: 105 LRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASM 164

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           Y KC  +E+A ++F  +    D + WN II    +N +   A+ LF EMQ +  K  S T
Sbjct: 165 YTKCGSLENARQVFDRMPK-RDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSST 223

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           +V ++  CA + A  +GKQIH Y ++S +ES++ V N L++MY++   +  A ++F+ M 
Sbjct: 224 LVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP 283

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
             +++SWN++I  Y+       A + FN+M                              
Sbjct: 284 IRDVASWNAIIGGYSLNSQHHEALAFFNRM------------------------------ 313

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
                Q  G +PN  ++  VL A   L  L+ G++ HGY +R+G + +  VG +L++MY 
Sbjct: 314 -----QVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYA 368

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------ 632
           K   + +A ++F+ M  +N+VAWN++ISGY   G    A  +  +M+ + IKPD      
Sbjct: 369 KCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVS 428

Query: 633 -----------------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
                                        +V    LV  Y+  G    A  +   M    
Sbjct: 429 VLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ- 487

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              +VV+WT++I     + +  ++L  F +MQ+   K +    +++L  C   GL+  G 
Sbjct: 488 ---DVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGL 544

Query: 724 E-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAI 781
           +   C+    G          L+D+  ++G+L  A  + +  + +  A+ W  ++    I
Sbjct: 545 QYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRI 604

Query: 782 YGN---GKEAILLFHELLETGFQPDAITFTALLA 812
           + N   G++A     EL      PD   +  LL+
Sbjct: 605 HCNIELGEQAAKHLFEL-----DPDNAGYYVLLS 633



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 163/410 (39%), Gaps = 89/410 (21%)

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
           V+A     Q  + +I+ + V W   + GY   G   +AL + + M+ +GI P+ + + S+
Sbjct: 67  VSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSV 126

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           I                                   + CG    LQ G+++H   +  GF
Sbjct: 127 I-----------------------------------KACGSQSDLQAGRKVHEDIIARGF 151

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
             D  V T L  MY+K G+L++AR+VF +   + + SWN +I G++  G   EA+ LF E
Sbjct: 152 ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSE 211

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
           +   G +P++ T  +++  C +   +E+G K     +    I   +   + +V++  K G
Sbjct: 212 MQVNGIKPNSSTLVSVMPVCAHLLALEQG-KQIHCYAIRSGIESDVLVVNGLVNMYAKCG 270

Query: 855 YLDEAWDFIRTMPFKPDATIWGALLGSCRIHG-HLEYAEIASR----------------- 896
            ++ A      MP + D   W A++G   ++  H E     +R                 
Sbjct: 271 NVNTAHKLFERMPIR-DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVL 329

Query: 897 ----RLFKLE--------------PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
                LF LE                N    N ++N+ A         +L   M +   K
Sbjct: 330 PACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPK---K 386

Query: 939 SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
           +V+ W     + I+  +S  G PH A          L  EM+  G  PD+
Sbjct: 387 NVVAW-----NAIISGYSQHGHPHEALA--------LFIEMQAQGIKPDS 423


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Vitis vinifera]
          Length = 993

 Score =  514 bits (1324), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 310/930 (33%), Positives = 482/930 (51%), Gaps = 69/930 (7%)

Query: 179  TDTLAKQA--QLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH 236
            TD  A Q+  Q S   +    L      + LS  +  HA MI    ++NS  +   L+F 
Sbjct: 100  TDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFM 159

Query: 237  YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
            Y + G    A K F     ++   W++ +  Y +  GE    LE++ E+   G+   +  
Sbjct: 160  YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVT-NGEPLGSLELYREMRVSGIPLDACT 218

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
               ILK C  L     G EVH   IK G+   V +  +++  Y KC D+  A +LF  + 
Sbjct: 219  FPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMP 278

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            + ED + WN +I     N +   A++LF EMQ +S    + T V  LQAC       +G 
Sbjct: 279  EKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM 338

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
             IH  VLKS+   N+ V N LI+MY+R  K+  A  +F     +N+  W           
Sbjct: 339  FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIF-----YNMDDW----------- 382

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                               D I+WN +LSG   +G Y   L     M+  G +P+  +V 
Sbjct: 383  -------------------DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVI 423

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             ++ A         G + H Y ++NGLD DL VG SL+DMY K   ++    +FD M ++
Sbjct: 424  SIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK 483

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---SGYSIWGQSKE-- 651
            ++V+W ++I+G+   G    A ++  +++ E I  D++  +S++   SG  +    KE  
Sbjct: 484  DVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIH 543

Query: 652  ALVIIHHMKN----SGI---------------------YPNVVTWTSLISGSLQNENYRE 686
            + +I   + +    +GI                     + +VV+WTS+IS  + N    E
Sbjct: 544  SYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANE 603

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +L+ F  M++  ++P+S ++ S+L     L  L+ GKEIH   ++ GF+ +  +A+ L+D
Sbjct: 604  ALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVD 663

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY++ G L+ +R VF    NK L  W  MI  + ++G G+ AI LF  + +    PD I 
Sbjct: 664  MYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIA 723

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F A+L AC +SGL+ EG ++ +SM  +Y + P  EHY C+VDLLG+A +L+EA+ F++ M
Sbjct: 724  FVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGM 783

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              +P A +W ALLG+C+IH + E  EIA+++L +++P N  NY L+ N+ A   RW+DVE
Sbjct: 784  EVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVE 843

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM-KKLGYV 985
             +R  M   G+K     SWI++   VH F A    HP + EIY +L  +  ++ K+ GYV
Sbjct: 844  EVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYV 903

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
              T+ V  +  EEEK ++L  H+E+LAI YG++ T   A +R+ KN RVC DCH   K +
Sbjct: 904  AQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLI 963

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S    RE+ +RD  RFHHF+ G CSC D W
Sbjct: 964  SKFFERELVMRDANRFHHFKGGVCSCGDVW 993


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 284/812 (34%), Positives = 431/812 (53%), Gaps = 76/812 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+ C +  +     ++H   +K   + D  +   L   Y  C  V  A +LF E+ +  
Sbjct: 14   LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-P 72

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
              +LWN+II     N  ++ AI L+  M     +    T   +L+AC+ + A  +G +IH
Sbjct: 73   SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             +     LES++ VC  L+  Y++   L  A R+F SM                      
Sbjct: 133  SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS--------------------- 171

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            D++ WN +++G   +G   + + L+  MQ  G  PN S++  VL
Sbjct: 172  --------------HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
              V E + L +G+  HGY +R   D  + VGT L+DMY K  CL  A+++FD M  RN V
Sbjct: 218  PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKP--------------------------- 631
            +W+++I GY        A ++ +QM  ++ + P                           
Sbjct: 278  SWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337

Query: 632  --------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                    D++  N+L+S Y+  G   +A+     M       + V++++++SG +QN N
Sbjct: 338  IIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPK----DSVSFSAIVSGCVQNGN 393

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
               +L  F  MQ   I P+ TTM  +L  C  L  LQ+G   H   +  GF  D  +   
Sbjct: 394  AAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNA 453

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            LIDMYSK G +  AREVF +     + SWN MI+G+ I+G G EA+ LFH+LL  G +PD
Sbjct: 454  LIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPD 513

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             ITF  LL++C +SGLV EG  +FD+MS D++I+P +EH  CMVD+LG+AG +DEA  FI
Sbjct: 514  DITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI 573

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
            R MPF+PD  IW ALL +CRIH ++E  E  S+++  L P ++ N+ L+ N+ + + RW+
Sbjct: 574  RNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWD 633

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            D   +R +  + G+K +   SWI+I+ IVH F      H    +I  +L  L+ EMK+LG
Sbjct: 634  DAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 693

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            Y  +   V+QD++EEEK ++LL H+EKLAI +G++  K+  PI V KN RVC DCH A K
Sbjct: 694  YQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIK 753

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +M+++  REI +RD  RFHHF+ G C+C D W
Sbjct: 754  FMTVITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 236/524 (45%), Gaps = 79/524 (15%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           + +L+AC +  +  E K+IH + LK+   ++ SV + L  +Y   N++ LA R+FD + +
Sbjct: 12  LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            ++  WN +I +Y                           WN         G +   + L
Sbjct: 72  PSVILWNQIIRAY--------------------------AWN---------GPFDGAIDL 96

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M  LG RPN  +   VL+A + L  ++ G E H +    GL+ D++V T+L+D Y K
Sbjct: 97  YHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAK 156

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--- 636
              L  AQ +F +M +R++VAWN++I+G    GL  +A +++ QM+EE I P+  +    
Sbjct: 157 CGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGV 216

Query: 637 --------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYP--NV 668
                                     N +V G  +     +   +++  K   +    N 
Sbjct: 217 LPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNE 276

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           V+W+++I G + ++  +E+L+ F QM  +D + P   T+ S+L+ C  L  L  G+++HC
Sbjct: 277 VSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHC 336

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
             +K G + D  +   L+ MY+K G +  A   F     K   S++ ++ G    GN   
Sbjct: 337 YIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAV 396

Query: 788 AILLFHELLETGFQPDAITFTALLAACKN-----SGLVEEGWKYFDSMSTDYNIIPTIEH 842
           A+ +F  +  +G  PD  T   +L AC +      G    G+      +TD  I      
Sbjct: 397 ALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLIC----- 451

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            + ++D+  K G +  A +    M  + D   W A++    IHG
Sbjct: 452 -NALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 162/709 (22%), Positives = 277/709 (39%), Gaps = 149/709 (21%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           + L+  K  H   +K     N+D  V   L   YL       A + F    + S   W+ 
Sbjct: 22  KSLTEAKKIHQHFLK--NTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQ 79

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +  Y ++ G     ++++  +   GV         +LK C+ L+A   GVE+H+     
Sbjct: 80  IIRAY-AWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMF 138

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G + DV +  AL++FY KC  +  A +LFS +S   D + WN +I         ++A++L
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQL 197

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
             +MQ       S TIV +L    +  A   GK +HGY ++ + ++ + V   L+ MY++
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              L  A ++FD M   N  SW++MI  Y     +  A  LF++M    I  D       
Sbjct: 258 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQM----ILKD------- 306

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
                                     P   ++  VL+A  +L  L  GR+ H YI++ G 
Sbjct: 307 -----------------------AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGX 343

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D+ +G +L+ MY K   + +A   FD M  ++ V++++++SG    G    A  +   
Sbjct: 344 VLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRM 403

Query: 624 MEEEEIKPDLVSW-----------------------------------NSLVSGYSIWGQ 648
           M+   I PDL +                                    N+L+  YS  G+
Sbjct: 404 MQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGK 463

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
              A  + + M       ++V+W ++I G   +    E+L  F  +    +KP+  T   
Sbjct: 464 ISFAREVFNRMDRH----DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519

Query: 709 LLQTCGGLGLLQNG---------------KEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           LL +C   GL+  G               +  HC+C              ++D+  ++G 
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCIC--------------MVDILGRAGL 565

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           +  A    R                                     F+PD   ++ALL+A
Sbjct: 566 IDEAHHFIRNMP----------------------------------FEPDVRIWSALLSA 591

Query: 814 C---KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
           C   KN  L EE  K   S+  +     +  ++  + ++   AG  D+A
Sbjct: 592 CRIHKNIELGEEVSKKIQSLGPE-----STGNFVLLSNIYSAAGRWDDA 635


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 270/710 (38%), Positives = 406/710 (57%), Gaps = 37/710 (5%)

Query: 366  EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            E I +  +   + + I++F  M        SR +  +++ CA + A   GKQ+H + L S
Sbjct: 44   ETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVS 103

Query: 426  ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
             L  +  V + L+ MY + + L+ A  VFD +    + + +++IS +   G V     LF
Sbjct: 104  GLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELF 163

Query: 486  NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
             +     ++ ++++WN ++SG    GSY + + + + M   G +P+G+SVS VL AV +L
Sbjct: 164  YQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDL 223

Query: 546  RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
             +   G + H Y+++ GL  D +V ++L+DMY K  C      VF               
Sbjct: 224  DMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVF--------------- 268

Query: 606  SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
                            N+M+E     D+ + N+LV+G S  G    AL +    K  G+ 
Sbjct: 269  ----------------NEMDEV----DVGACNALVTGLSRNGLVDNALEVFKQFK--GMD 306

Query: 666  PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             NVV+WTS+I+   QN    E+L+ F +MQ E +KPNS T+  LL  CG +  L +GK  
Sbjct: 307  LNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAA 366

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            HC  L+NG   D YV + LIDMY+K G + ++R  F    N+ L SWN ++ G+A++G  
Sbjct: 367  HCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKT 426

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
             EAI +F  +   G +PD ++FT +L+AC   GL EEGW YFDSMS ++ +   +EHYSC
Sbjct: 427  FEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSC 486

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            MV LLG++G L+EA+  I+ MPF+PD+ +WGALL SCR+H  ++  EIA++R+F+LEP N
Sbjct: 487  MVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRN 546

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
              NY L+ N+ A    W +V+ +R  M   G+K    +SWI+I   VH+  A  + HP  
Sbjct: 547  PGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQM 606

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
             +I  +L  L  EMKK GYVP T  V QD++E++K ++L  H+EKLA+V GL+ TK   P
Sbjct: 607  PQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFP 666

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++VIKN R+C DCH   K++S    REIF+RD  RFH F+ G CSC D W
Sbjct: 667  LQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 229/504 (45%), Gaps = 44/504 (8%)

Query: 245 SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
           S A A  L    S  +          FG     ++ V+  +  +G++  SR+L  ++K C
Sbjct: 29  SQAHAHILKTGISLPETIQIFSKLNHFG----HVIRVFSYMLTQGIVPDSRVLPTVIKTC 84

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDV--------------HLK-----------------C 333
             L A   G ++H   +  G   D               HLK                  
Sbjct: 85  AALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSS 144

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDL---LWNEIIMVKLRNEKWENAIKLFREMQFS 390
           AL++ + +   V+   +LF +  DL  +L    WN +I    R+  + +A+ +F+ M   
Sbjct: 145 ALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLE 204

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             K    ++  +L A   +     G QIH YV+K  L  +  V + LI MY +       
Sbjct: 205 GLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEM 264

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           + VF+ M + ++ + N++++  +  G VD A  +F +     +  ++++W  +++    +
Sbjct: 265 SGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDL--NVVSWTSMIASCSQN 322

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G     L L R MQ  G +PN  ++  +L A   +  L +G+ +H + LRNG+  D+YVG
Sbjct: 323 GKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVG 382

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           ++L+DMY K   +  ++  FD M NRN+V+WNSL++GY   G    A  +   M+    K
Sbjct: 383 SALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQK 442

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLK 689
           PD VS+  ++S  +  G ++E       M +N G+   +  ++ +++   ++    E+  
Sbjct: 443 PDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYA 502

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
              QM  E   P+S    +LL +C
Sbjct: 503 MIKQMPFE---PDSCVWGALLSSC 523


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 284/883 (32%), Positives = 454/883 (51%), Gaps = 78/883 (8%)

Query: 230  VKSLIFHYLEFGDFTSAAKAF--FLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
            V +LI  Y++ G    A + +    Y  R+   W++ +  Y  +G  +++ L++  ++  
Sbjct: 61   VNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYG-YIEKALKLLRQMQQ 119

Query: 288  KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
             G+      +   L  C    A   G E+H   ++ G  FDV +   ++N Y KC  +E 
Sbjct: 120  HGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEE 179

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A ++F ++ + +  + W   I       + E A ++F++M+         T + +L A +
Sbjct: 180  AREVFDKM-EKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFS 238

Query: 408  KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
               A   GK +H  +L +  ES+ +V   L+ MY++    +   +VF+ + + +L +WN+
Sbjct: 239  SPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNT 298

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            MI      GY + A  ++N+M    + P+ IT+                           
Sbjct: 299  MIGGLAEGGYWEEASEVYNQMQREGVMPNKITY--------------------------- 331

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
                     ++L A      L +G+E H  + + G   D+ V  +L+ MY +   +++A+
Sbjct: 332  --------VILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDAR 383

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------- 636
             VFD M  +++++W ++I G    G    A  +  +M++  ++P+ V++           
Sbjct: 384  LVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPA 443

Query: 637  ------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                                    N+LV+ YS+ G  K+A  +   M    I  ++V + 
Sbjct: 444  ALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM----IQRDIVAYN 499

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            ++I G   +   +E+LK F ++Q+E +KP+  T  ++L  C   G L+  +EIH L  K 
Sbjct: 500  AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG 559

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF  D  V   L+  Y+K G+   A  VF K   + + SWN +I G A +G G++A+ LF
Sbjct: 560  GFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLF 619

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
              +   G +PD +TF +LL+AC ++GL+EEG +YF SMS D+ IIPTIEHY CMVDLLG+
Sbjct: 620  ERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGR 679

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG LDEA   I+TMPF+ +  IWGALLG+CRIHG++  AE A+    KL+  N+  Y  +
Sbjct: 680  AGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVAL 739

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             ++ A +  W+   +LR  M++ GV      SWIQ+   +H F AE   HP + +IY EL
Sbjct: 740  SHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAEL 799

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L   MK  GYVPDTR V  D+DE EK   +  H+E+LAI YGL+ T     I + KN 
Sbjct: 800  DRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNL 859

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCHTA K++S +  REI  RD  RFHHF++G CSC D W
Sbjct: 860  RVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/627 (24%), Positives = 279/627 (44%), Gaps = 83/627 (13%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
           FL+       L   +  H Q ++ G +++   +   ++  Y + G    A + F     +
Sbjct: 132 FLSSCKSPGALEWGREIHFQAMQAGLLFDVK-VANCILNMYAKCGSIEEAREVFDKMEKK 190

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           S   W+  +  Y   G   +   E++ ++  +GV+        +L   +   A   G  V
Sbjct: 191 SVVSWTITIGGYADCG-RSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAV 249

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H+ ++  G + D  +  AL+  Y KC   +   ++F ++ +  D + WN +I        
Sbjct: 250 HSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVN-RDLIAWNTMIGGLAEGGY 308

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
           WE A +++ +MQ         T V +L AC    A H GK+IH  V K+   S++ V N 
Sbjct: 309 WEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNA 368

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LISMYSR   ++ A  VFD M   ++ SW +MI      G+   A +++ +M  + ++P+
Sbjct: 369 LISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPN 428

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            +T+                                   + +L A +    L++GR  H 
Sbjct: 429 RVTY-----------------------------------TSILNACSSPAALEWGRRIHQ 453

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
            ++  GL  D +VG +L++MY     +++A++VFD M  R+IVA+N++I GY    L   
Sbjct: 454 QVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKE 513

Query: 617 AKKMLNQMEEEEIKPDLVSW-----------------------------------NSLVS 641
           A K+ ++++EE +KPD V++                                   N+LVS
Sbjct: 514 ALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVS 573

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            Y+  G   +A ++   M       NV++W ++I GS Q+   +++L+ F +M+ E +KP
Sbjct: 574 TYAKCGSFSDASIVFEKMTKR----NVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKP 629

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSAREV 760
           +  T  SLL  C   GLL+ G+   C   ++  I       G ++D+  ++G L  A  +
Sbjct: 630 DIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEAL 689

Query: 761 FRK---SANKTLASWNCMIMGFAIYGN 784
            +     AN  +  W  ++    I+GN
Sbjct: 690 IKTMPFQANTRI--WGALLGACRIHGN 714



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 109/201 (54%), Gaps = 6/201 (2%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           +QQ+  + NS+    +L+ C  +  L  G+++H   +++  + D Y    LI+MY + G+
Sbjct: 14  LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73

Query: 754 LKSAREVFRKSA--NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           ++ AR+V++K +   +T+ SWN M++G+  YG  ++A+ L  ++ + G  PD  T  + L
Sbjct: 74  IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133

Query: 812 AACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
           ++CK+ G +E G + +F +M     ++  ++  +C++++  K G ++EA +    M  K 
Sbjct: 134 SSCKSPGALEWGREIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEEAREVFDKME-KK 190

Query: 871 DATIWGALLGSCRIHGHLEYA 891
               W   +G     G  E A
Sbjct: 191 SVVSWTITIGGYADCGRSETA 211


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 289/826 (34%), Positives = 425/826 (51%), Gaps = 75/826 (9%)

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            LH KG    S     +L+ C K     +G +VH  +++ G   +V++   L+  Y  C  
Sbjct: 19   LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            V  A +LF + S+ +  + WN +I         + A  LF  MQ    +    T V +L 
Sbjct: 79   VNEARQLFDKFSN-KSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILS 137

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
            AC+     + G++IH  V+++ L ++ +V N LISMY++   +  A RVFD+M   +  S
Sbjct: 138  ACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVS 197

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
            W ++  +Y   GY + +   ++ M   R++P  IT             Y NVL+      
Sbjct: 198  WTTLTGAYAESGYGEESLKTYHAMLQERVRPSRIT-------------YMNVLS------ 238

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
                            A   L  L+ G++ H +I+ +    D+ V T+L  MY+K    +
Sbjct: 239  ----------------ACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFK 282

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------- 636
            +A+EVF+ +  R+++AWN++I G+   G    A    ++M EE + PD  ++        
Sbjct: 283  DAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACA 342

Query: 637  ---------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                                       N+L++ YS  G  K+A  +   M       +VV
Sbjct: 343  RPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR----DVV 398

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +WT+L+      +   ES   F QM Q+ +K N  T   +L+ C     L+ GKEIH   
Sbjct: 399  SWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEV 458

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            +K G + D  V   L+ MY K G+++ A  VF   + + + +WN +I G    G G EA+
Sbjct: 459  VKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEAL 518

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
              +  +   G +P+A TF  +L+AC+   LVEEG + F  MS DY I+PT +HY+CMVD+
Sbjct: 519  QRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDI 578

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L +AG+L EA D I T+P KP A +WGALL +CRIH ++E  E A+    KLEP N+  Y
Sbjct: 579  LARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLY 638

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
              +  + A +  W DV +LR  M E GVK     SWI+I   VH F A    HP T EIY
Sbjct: 639  VSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIY 698

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             EL  L  +MK LGYVPDTR V  D+D+E K + +  H+EKLAI YGL+ T    PIR+ 
Sbjct: 699  AELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRIS 758

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVC+DCHTA K++S +  REI  RD  RFHHF+ GECSC D W
Sbjct: 759  KNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 241/543 (44%), Gaps = 68/543 (12%)

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
           M+    + W     + + +     +  S   VK+LQ+C K      GKQ+H ++L+  ++
Sbjct: 1   MIPTGKDGWYAPADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVK 60

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            N+ + N L+ +Y+    +  A ++FD   + ++ SWN MIS Y   G    A++LF  M
Sbjct: 61  PNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLM 120

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
              R++PD  T+  +LS                                   A +   +L
Sbjct: 121 QQERLEPDKFTFVSILS-----------------------------------ACSSPAVL 145

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
            +GRE H  ++  GL  D  VG +L+ MY K   +++A+ VFD M +R+ V+W +L   Y
Sbjct: 146 NWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 205

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI---- 664
              G    + K  + M +E ++P  +++ +++S        ++   I  H+  S      
Sbjct: 206 AESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDV 265

Query: 665 ---------------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
                                      Y +V+ W ++I G + +    E+   F +M +E
Sbjct: 266 RVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEE 325

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            + P+  T +++L  C   G L  GKEIH    K+G + D      LI+MYSK+G++K A
Sbjct: 326 GVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDA 385

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
           R+VF +   + + SW  ++  +A      E+   F ++L+ G + + IT+  +L AC N 
Sbjct: 386 RQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNP 445

Query: 818 GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
             ++ G K   +      ++  +   + ++ +  K G +++A      M  + D   W  
Sbjct: 446 VALKWG-KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNT 503

Query: 878 LLG 880
           L+G
Sbjct: 504 LIG 506



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 176/416 (42%), Gaps = 48/416 (11%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSR 256
           L+       L   K  HA +++    ++SD  V + L   Y++ G F  A + F     R
Sbjct: 237 LSACGSLAALEKGKQIHAHIVE--SEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYR 294

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               W++ +  +    G+++E    +  +  +GV       T +L  C +      G E+
Sbjct: 295 DVIAWNTMIRGFVD-SGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEI 353

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           HA   K G   DV    AL+N Y K   ++ A ++F  +    D + W  ++      ++
Sbjct: 354 HARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPK-RDVVSWTTLLGRYADCDQ 412

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
              +   F++M     KA   T + +L+AC+   A   GK+IH  V+K+ L ++L+V N 
Sbjct: 413 VVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNA 472

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           L+SMY +   +E A RVF+ M   ++ +WN++I    GLG                    
Sbjct: 473 LMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG---GLG-------------------- 509

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
                        +G     L     M+S G RPN ++   VL A     L++ GR    
Sbjct: 510 ------------QNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFA 557

Query: 557 YILRNGLDYDLYVG----TSLMDMYVKNDCLQNAQEVFDNMKNRNIVA-WNSLISG 607
           ++ +   DY +         ++D+  +   L+ A++V   +  +   A W +L++ 
Sbjct: 558 FMSK---DYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAA 610


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Vitis vinifera]
          Length = 866

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/829 (33%), Positives = 451/829 (54%), Gaps = 65/829 (7%)

Query: 276  QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
            +E L ++  L   G       L+ +LK+C  L    +G +VH   IK GF  DV +  +L
Sbjct: 74   KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133

Query: 336  MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
            ++ Y K   VE   ++F E+  +++ + W  ++    +N   E A+KLF +MQ    K  
Sbjct: 134  VDMYMKTESVEDGERVFDEMR-VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPN 192

Query: 396  SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
              T   +L   A  GA  +G Q+H  V+KS L+S + V N +++MYS++  +  A  VFD
Sbjct: 193  PFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFD 252

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            SM++ N                                    ++WN +++G  T+G    
Sbjct: 253  SMENRN-----------------------------------AVSWNSMIAGFVTNGLDLE 277

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
               L   M+  G +   +  + V++    ++ + + ++ H  +++NG D+DL + T+LM 
Sbjct: 278  AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV 337

Query: 576  MYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
             Y K   + +A ++F  M   +N+V+W ++ISGY   G    A  +  QM  E ++P+  
Sbjct: 338  AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHF 397

Query: 635  SWNSLVSGYSIWGQSK-EALVIIHHMKNS---------------------GIY-----PN 667
            +++++++  +    S+  ALV+  + +NS                      I+      +
Sbjct: 398  TYSTILTANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKD 457

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG-LGLLQNGKEIH 726
            +V W++++SG  Q  +   ++K F+Q+ +E ++PN  T SS+L  C      ++ GK+ H
Sbjct: 458  IVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFH 517

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               +K+GF     V++ L+ MY+K GN++SA EVF++  ++ L SWN MI G+A +G GK
Sbjct: 518  SCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGK 577

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            +++ +F E+     + D ITF  +++AC ++GLV EG +YFD M  DY+I+PT+EHYSCM
Sbjct: 578  KSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCM 637

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VDL  +AG L++A D I  MPF   ATIW  LL +CR+H +++  E+A+ +L  L+P +S
Sbjct: 638  VDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDS 697

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            A Y L+ N+ A +  W++  ++R  MD   VK    +SWI++      F A    HP + 
Sbjct: 698  AAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSD 757

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
             IY +L  L   +K  GY PDT+ V  D++EE K  +L  H+E+LAI +GL+ T    PI
Sbjct: 758  RIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPI 817

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +++KN RVC DCHT  K +S + GR+I +RD  RFHHF+ G CSC D W
Sbjct: 818  QIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 250/549 (45%), Gaps = 78/549 (14%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           RN++ + A+ LF  ++ S +     ++  +L+ C  +     GKQ+H   +K     ++S
Sbjct: 69  RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVS 128

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V   L+ MY +   +E   RVFD M+  N+ SW S+++ Y   G  + A  LF++M    
Sbjct: 129 VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG 188

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           I+P+  T+  +L G    G+ +                                    G 
Sbjct: 189 IKPNPFTFAAVLGGLAADGAVEK-----------------------------------GV 213

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + H  ++++GLD  ++VG S+++MY K+  + +A+ VFD+M+NRN V+WNS+I+G+   G
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273

Query: 613 LFVNAKKMLNQMEEEEIKP-----------------------------------DLVSWN 637
           L + A ++  +M  E +K                                    DL    
Sbjct: 274 LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT 333

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           +L+  YS   +  +A  +   M       NVV+WT++ISG +QN     ++  F QM++E
Sbjct: 334 ALMVAYSKCSEIDDAFKLFCMMHG---VQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            ++PN  T S++L     +    +  +IH L +K  +     V T L D YSK G+   A
Sbjct: 391 GVRPNHFTYSTILTANAAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEA 446

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            ++F     K + +W+ M+ G+A  G+ + A+ +F +L + G +P+  TF+++L AC   
Sbjct: 447 AKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAP 506

Query: 818 GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
               E  K F S S        +   S +V +  K G ++ A +  +      D   W +
Sbjct: 507 TASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNS 565

Query: 878 LLGSCRIHG 886
           ++     HG
Sbjct: 566 MISGYAQHG 574



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 5/246 (2%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA ++K     NS  +  +L   Y + GD   AAK F L   +    WS+ L  Y    G
Sbjct: 415 HALVVKT-NYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQM-G 472

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHLK 332
           +++  ++++ +L  +GV       + +L  C    A    G + H+  IK GF   + + 
Sbjct: 473 DIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVS 532

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  Y K  ++ESAN++F    D  D + WN +I    ++   + ++K+F EM+  + 
Sbjct: 533 SALVTMYAKRGNIESANEVFKRQVD-RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNL 591

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELAT 451
           +    T + ++ AC   G  +EG++    ++K   +   +   +C++ +YSR   LE A 
Sbjct: 592 ELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAM 651

Query: 452 RVFDSM 457
            + + M
Sbjct: 652 DLINKM 657


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 284/883 (32%), Positives = 449/883 (50%), Gaps = 104/883 (11%)

Query: 296  ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
            I   IL+ C KL    LG +VHA L+  G D    L   L+  Y +   VE A ++F ++
Sbjct: 91   IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 150

Query: 356  SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            S+  +   W  I+ +      +E  IKLF  M     +       K+ +AC+++  +  G
Sbjct: 151  SE-RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            K ++ Y+L    E N  V   ++ M+ +  ++++A R F+ ++  ++  WN M+S YT  
Sbjct: 210  KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 269

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV------------------- 516
            G    A    + M  S ++PD +TWN ++SG+   G ++                     
Sbjct: 270  GEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVS 329

Query: 517  -----------------LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
                             L++ R M   G +PN  +++  + A T L LL++GRE HGY +
Sbjct: 330  WTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 389

Query: 560  R-NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN--------------------- 597
            +   LD DL VG SL+D Y K   ++ A+  F  +K  +                     
Sbjct: 390  KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAI 449

Query: 598  --------------IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
                          I+ WN L++G+   G    A +   +M    + P+  + +  ++  
Sbjct: 450  ELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAAC 509

Query: 644  S-----IWGQSKEALVIIHHMK-NSGI-------------------------YPNVVTWT 672
                    G+     V+ +H++ ++G+                           +VV W 
Sbjct: 510  GQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            S+IS   Q+     +L    +M   +++ N+ TM S L  C  L  L+ GKEIH   ++ 
Sbjct: 570  SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G     ++   LIDMY + G+++ +R +F     + L SWN MI  + ++G G +A+ LF
Sbjct: 630  GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             +    G +P+ ITFT LL+AC +SGL+EEGWKYF  M T+Y + P +E Y+CMVDLL +
Sbjct: 690  QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG  +E  +FI  MPF+P+A +WG+LLG+CRIH + + AE A+R LF+LEP +S NY LM
Sbjct: 750  AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLM 809

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ + + RWED  ++R  M E GV      SWI++ + +H F      HP   +I  ++
Sbjct: 810  ANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKM 869

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L  ++K++GYVPDT  V QD+DE+EK   L  H+EK+A+ +GL+ T +  P+R+IKN 
Sbjct: 870  ESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNL 929

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCH+A K++S V  R+I +RD  RFHHF +G CSC D W
Sbjct: 930  RVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 247/578 (42%), Gaps = 101/578 (17%)

Query: 193 SGFCFLNETNK-FRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF 251
           SG+    E  K  +C+S +K    +  ++   WN+      +I  Y + G F  A+K F 
Sbjct: 264 SGYTSKGEFKKALKCISDMKLSGVKPDQV--TWNA------IISGYAQSGQFEEASKYFL 315

Query: 252 LY-----FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTK 306
                  F  +   W++ +   E  G +  E L V+ ++  +GV   S  +   +  CT 
Sbjct: 316 EMGGLKDFKPNVVSWTALIAGSEQNGYDF-EALSVFRKMVLEGVKPNSITIASAVSACTN 374

Query: 307 LMAFWLGVEVHASLIK-RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
           L     G E+H   IK    D D+ +  +L+++Y KCR VE A + F  +    D + WN
Sbjct: 375 LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQ-TDLVSWN 433

Query: 366 EIIMVKLRNEKWENAIKLFREM--------------------QFSSAKAI---------- 395
            ++         E AI+L  EM                    Q+   KA           
Sbjct: 434 AMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM 493

Query: 396 -----SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                + TI   L AC +V     GK+IHGYVL++ +E +  V + LISMYS  + LE+A
Sbjct: 494 GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVA 553

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             VF  +   ++  WNS+IS+                              C  SG    
Sbjct: 554 CSVFSELSTRDVVVWNSIISA------------------------------CAQSGRSV- 582

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
               N L LLR M       N  ++   L A ++L  L+ G+E H +I+R GLD   ++ 
Sbjct: 583 ----NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFIL 638

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            SL+DMY +   +Q ++ +FD M  R++V+WN +IS Y   G  ++A  +  Q     +K
Sbjct: 639 NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK 698

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLK 689
           P+ +++ +L+S  S  G  +E       MK    + P V  +  ++    +   + E+L+
Sbjct: 699 PNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLE 758

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           F  +M  E   PN+    SLL  C           IHC
Sbjct: 759 FIEKMPFE---PNAAVWGSLLGAC----------RIHC 783



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 123/301 (40%), Gaps = 16/301 (5%)

Query: 173 SLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS 232
           S+ + P  T    A  +C            + R L   K  H  +++   I  S  +  +
Sbjct: 492 SMGMDPNTTTISGALAAC-----------GQVRNLKLGKEIHGYVLR-NHIELSTGVGSA 539

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y        A   F    +R    W+S +      G  V  L ++  E++   V  
Sbjct: 540 LISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNAL-DLLREMNLSNVEV 598

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
            +  +   L  C+KL A   G E+H  +I+ G D    +  +L++ YG+C  ++ + ++F
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            ++    D + WN +I V   +    +A+ LF++ +    K    T   +L AC+  G  
Sbjct: 659 -DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLI 717

Query: 413 HEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS 470
            EG K       + A++  +    C++ + SR  +        + M  + N + W S++ 
Sbjct: 718 EEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLG 777

Query: 471 S 471
           +
Sbjct: 778 A 778


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 285/882 (32%), Positives = 453/882 (51%), Gaps = 77/882 (8%)

Query: 229  MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
            M  +LI  Y + G+  SA + F     +    W+  L  Y   G   +E  ++  ++   
Sbjct: 147  MRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG-LYEEAFKLHEQMVQD 205

Query: 289  GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
             V    R    +L  C        G E++  ++K G+D D+ +  AL+N + KC D+  A
Sbjct: 206  SVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDA 265

Query: 349  NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             K+F  +    D + W  +I    R+ +++ A  LF+ M+    +      V +L+AC  
Sbjct: 266  TKVFDNLP-TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
              A  +GK++H  + +   ++ + V   ++SMY++   +E A  VFD +K  N       
Sbjct: 325  PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN------- 377

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                                        +++W  +++G   HG           M   G 
Sbjct: 378  ----------------------------VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
             PN  +   +L A +    LK G++   +I+  G   D  V T+L+ MY K   L++A  
Sbjct: 410  EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP----------------- 631
            VF+ +  +N+VAWN++I+ Y     + NA      + +E IKP                 
Sbjct: 470  VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529

Query: 632  ------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                              DL   N+LVS +   G    A  + + M       ++V+W +
Sbjct: 530  LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR----DLVSWNT 585

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I+G +Q+   + +  +F  MQ+  IKP+  T + LL  C     L  G+ +H L  +  
Sbjct: 586  IIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAA 645

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            F  D  V TGLI MY+K G+++ A +VF K   K + SW  MI G+A +G GKEA+ LF+
Sbjct: 646  FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFY 705

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            ++ + G +PD ITF   L+AC ++GL+EEG  +F SM  ++NI P +EHY CMVDL G+A
Sbjct: 706  QMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRA 764

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L+EA +FI  M  +PD+ +WGALLG+C++H ++E AE A+++  +L+P ++  + ++ 
Sbjct: 765  GLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A +  W++V ++R  M + GV      SWI++D  VH F ++   HP T EI+ EL 
Sbjct: 825  NIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELE 884

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L  EM++LGYVPDTR V  D+++ EK + L  H+E+LAI YGL+KT    PI + KN R
Sbjct: 885  RLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLR 944

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            VC DCHTA K++S +  R+I  RD  RFHHF++G CSC D W
Sbjct: 945  VCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 309/648 (47%), Gaps = 69/648 (10%)

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G+  E ++V   +    +    +  + +L+LC K      G  ++  + K G   D+
Sbjct: 86  SKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDI 145

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            ++  L+N Y KC +  SA ++F ++ + +D   WN ++   +++  +E A KL  +M  
Sbjct: 146 FMRNTLINMYAKCGNTISAKQIFDDMRE-KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQ 204

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            S K   RT V ML ACA      +G++++  +LK+  +++L V   LI+M+ +   +  
Sbjct: 205 DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           AT+VFD++   +L +W SMI+     G    A +LF +M    +QPD + +         
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAF--------- 315

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                  ++LLR                   A      L+ G++ H  +   G D ++YV
Sbjct: 316 -------VSLLR-------------------ACNHPEALEQGKKVHARMKEVGWDTEIYV 349

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GT+++ MY K   +++A EVFD +K RN+V+W ++I+G+   G    A    N+M E  I
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG-------------IYP---------- 666
           +P+ V++ S++   S     K    I  H+  +G             +Y           
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469

Query: 667 --------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                   NVV W ++I+  +Q+E Y  +L  F  + +E IKPNS+T +S+L  C     
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L+ GK +H L +K G   D +V+  L+ M+   G+L SA+ +F     + L SWN +I G
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
           F  +G  + A   F  + E+G +PD ITFT LL AC +   + EG +   ++ T+     
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG-RRLHALITEAAFDC 648

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            +   + ++ +  K G +++A      +P K +   W +++     HG
Sbjct: 649 DVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHG 695



 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 271/572 (47%), Gaps = 78/572 (13%)

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
           +D++D    N ++    +  ++  A+++   +  S  +   +T   +LQ C K     +G
Sbjct: 70  ADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDG 129

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           ++I+ ++ KS ++ ++ + N LI+MY++      A ++FD M++ ++ SWN ++  Y   
Sbjct: 130 ERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G  + A+ L  +M    ++PD  T+  +L+                              
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLN------------------------------ 219

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
                A  + R +  GRE +  IL+ G D DL+VGT+L++M++K   + +A +VFDN+  
Sbjct: 220 -----ACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT 274

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------- 639
           R++V W S+I+G    G F  A  +  +MEEE ++PD V++ SL                
Sbjct: 275 RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKV 334

Query: 640 -------------------VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                              +S Y+  G  ++AL +   +K      NVV+WT++I+G  Q
Sbjct: 335 HARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR----NVVSWTAMIAGFAQ 390

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           +    E+  FF +M +  I+PN  T  S+L  C     L+ G++I    ++ G+  D  V
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            T L+ MY+K G+LK A  VF K + + + +WN MI  +  +     A+  F  LL+ G 
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510

Query: 801 QPDAITFTALLAACKNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
           +P++ TFT++L  CK+S  +E G W +F  M     +   +   + +V +    G L  A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSA 568

Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            +    MP K D   W  ++     HG  + A
Sbjct: 569 KNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 229/457 (50%), Gaps = 38/457 (8%)

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
           N +L+     G +   + +L  + S   +    + S +LQ   + + L  G   + +I +
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
           +G+  D+++  +L++MY K     +A+++FD+M+ +++ +WN L+ GY   GL+  A K+
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198

Query: 621 LNQMEEEEIKPDLVSWNSLVS----------GYSIW------GQSKEALV----IIHHMK 660
             QM ++ +KPD  ++ S+++          G  ++      G   +  V    I  H+K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 661 NSGI-----------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
              I             ++VTWTS+I+G  ++  ++++   F +M++E ++P+     SL
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           L+ C     L+ GK++H    + G+  + YV T ++ MY+K G+++ A EVF     + +
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS 829
            SW  MI GFA +G   EA L F++++E+G +P+ +TF ++L AC +   ++ G +  D 
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438

Query: 830 -MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            +   Y     +   + ++ +  K G L +A      +  K +   W A++ +   H   
Sbjct: 439 IIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQY 495

Query: 889 EYAEIASRRLFK--LEPCNSANYNLMMNLLAMSNRWE 923
           + A    + L K  ++P NS+ +  ++N+   S+  E
Sbjct: 496 DNALATFQALLKEGIKP-NSSTFTSILNVCKSSDSLE 531



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 129/264 (48%), Gaps = 21/264 (7%)

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
            + E+++   ++    I+    T S+LLQ C     L +G+ I+    K+G   D ++  
Sbjct: 90  QFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRN 149

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            LI+MY+K GN  SA+++F     K + SWN ++ G+  +G  +EA  L  ++++   +P
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSM-----STDYNIIPTIEHYSCMVDLLGKAGYLD 857
           D  TF ++L AC ++  V++G + ++ +      TD  +       + ++++  K G + 
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV------GTALINMHIKCGDIG 263

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK--LEPCNSANYNLMMNL 915
           +A      +P + D   W +++     HG  + A    +R+ +  ++P   A     ++L
Sbjct: 264 DATKVFDNLPTR-DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVA----FVSL 318

Query: 916 LAMSNRWEDVE---RLRHSMDEVG 936
           L   N  E +E   ++   M EVG
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVG 342


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  504 bits (1298), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 285/882 (32%), Positives = 453/882 (51%), Gaps = 77/882 (8%)

Query: 229  MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
            M  +LI  Y + G+  SA + F     +    W+  L  Y   G   +E  ++  ++   
Sbjct: 147  MWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG-LYEEAFKLHEQMVQD 205

Query: 289  GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
             V    R    +L  C        G E++  ++K G+D D+ +  AL+N + KC D+  A
Sbjct: 206  SVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDA 265

Query: 349  NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             K+F  +    D + W  +I    R+ +++ A  LF+ M+    +      V +L+AC  
Sbjct: 266  TKVFDNLP-TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNH 324

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
              A  +GK++H  + +   ++ + V   ++SMY++   +E A  VFD +K  N       
Sbjct: 325  PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN------- 377

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                                        +++W  +++G   HG           M   G 
Sbjct: 378  ----------------------------VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
             PN  +   +L A +    LK G++   +I+  G   D  V T+L+ MY K   L++A  
Sbjct: 410  EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP----------------- 631
            VF+ +  +N+VAWN++I+ Y     + NA      + +E IKP                 
Sbjct: 470  VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529

Query: 632  ------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                              DL   N+LVS +   G    A  + + M       ++V+W +
Sbjct: 530  LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR----DLVSWNT 585

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I+G +Q+   + +  +F  MQ+  IKP+  T + LL  C     L  G+ +H L  +  
Sbjct: 586  IIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAA 645

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            F  D  V TGLI MY+K G+++ A +VF K   K + SW  MI G+A +G GKEA+ LF+
Sbjct: 646  FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFY 705

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            ++ + G +PD ITF   L+AC ++GL+EEG  +F SM  ++NI P +EHY CMVDL G+A
Sbjct: 706  QMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRA 764

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L+EA +FI  M  +PD+ +WGALLG+C++H ++E AE A+++  +L+P ++  + ++ 
Sbjct: 765  GLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A +  W++V ++R  M + GV      SWI++D  VH F ++   HP T EI+ EL 
Sbjct: 825  NIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELE 884

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L  EM++LGYVPDTR V  D+++ EK + L  H+E+LAI YGL+KT    PI + KN R
Sbjct: 885  RLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLR 944

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            VC DCHTA K++S +  R+I  RD  RFHHF++G CSC D W
Sbjct: 945  VCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 308/648 (47%), Gaps = 69/648 (10%)

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G+  E ++V   +    +    +  + +L+LC K      G  ++  + K G   D+
Sbjct: 86  SKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDI 145

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +   L+N Y KC +  SA ++F ++ + +D   WN ++   +++  +E A KL  +M  
Sbjct: 146 FMWNTLINMYAKCGNTISAKQIFDDMRE-KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQ 204

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            S K   RT V ML ACA      +G++++  +LK+  +++L V   LI+M+ +   +  
Sbjct: 205 DSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGD 264

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           AT+VFD++   +L +W SMI+     G    A +LF +M    +QPD + +         
Sbjct: 265 ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAF--------- 315

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                  ++LLR                   A      L+ G++ H  +   G D ++YV
Sbjct: 316 -------VSLLR-------------------ACNHPEALEQGKKVHARMKEVGWDTEIYV 349

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GT+++ MY K   +++A EVFD +K RN+V+W ++I+G+   G    A    N+M E  I
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG-------------IYP---------- 666
           +P+ V++ S++   S     K    I  H+  +G             +Y           
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469

Query: 667 --------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                   NVV W ++I+  +Q+E Y  +L  F  + +E IKPNS+T +S+L  C     
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L+ GK +H L +K G   D +V+  L+ M+   G+L SA+ +F     + L SWN +I G
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
           F  +G  + A   F  + E+G +PD ITFT LL AC +   + EG +   ++ T+     
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG-RRLHALITEAAFDC 648

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            +   + ++ +  K G +++A      +P K +   W +++     HG
Sbjct: 649 DVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHG 695



 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 271/572 (47%), Gaps = 78/572 (13%)

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
           +D++D    N ++    +  ++  A+++   +  S  +   +T   +LQ C K     +G
Sbjct: 70  ADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDG 129

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           ++I+ ++ KS ++ ++ + N LI+MY++      A ++FD M++ ++ SWN ++  Y   
Sbjct: 130 ERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G  + A+ L  +M    ++PD  T+  +L+                              
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLN------------------------------ 219

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
                A  + R +  GRE +  IL+ G D DL+VGT+L++M++K   + +A +VFDN+  
Sbjct: 220 -----ACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT 274

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------- 639
           R++V W S+I+G    G F  A  +  +MEEE ++PD V++ SL                
Sbjct: 275 RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKV 334

Query: 640 -------------------VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                              +S Y+  G  ++AL +   +K      NVV+WT++I+G  Q
Sbjct: 335 HARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR----NVVSWTAMIAGFAQ 390

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           +    E+  FF +M +  I+PN  T  S+L  C     L+ G++I    ++ G+  D  V
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            T L+ MY+K G+LK A  VF K + + + +WN MI  +  +     A+  F  LL+ G 
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510

Query: 801 QPDAITFTALLAACKNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
           +P++ TFT++L  CK+S  +E G W +F  M     +   +   + +V +    G L  A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSA 568

Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            +    MP K D   W  ++     HG  + A
Sbjct: 569 KNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 229/457 (50%), Gaps = 38/457 (8%)

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
           N +L+     G +   + +L  + S   +    + S +LQ   + + L  G   + +I +
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
           +G+  D+++  +L++MY K     +A+++FD+M+ +++ +WN L+ GY   GL+  A K+
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198

Query: 621 LNQMEEEEIKPDLVSWNSLVS----------GYSIW------GQSKEALV----IIHHMK 660
             QM ++ +KPD  ++ S+++          G  ++      G   +  V    I  H+K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 661 NSGI-----------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
              I             ++VTWTS+I+G  ++  ++++   F +M++E ++P+     SL
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           L+ C     L+ GK++H    + G+  + YV T ++ MY+K G+++ A EVF     + +
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS 829
            SW  MI GFA +G   EA L F++++E+G +P+ +TF ++L AC +   ++ G +  D 
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438

Query: 830 -MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            +   Y     +   + ++ +  K G L +A      +  K +   W A++ +   H   
Sbjct: 439 IIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQY 495

Query: 889 EYAEIASRRLFK--LEPCNSANYNLMMNLLAMSNRWE 923
           + A    + L K  ++P NS+ +  ++N+   S+  E
Sbjct: 496 DNALATFQALLKEGIKP-NSSTFTSILNVCKSSDSLE 531



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 129/264 (48%), Gaps = 21/264 (7%)

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
            + E+++   ++    I+    T S+LLQ C     L +G+ I+    K+G   D ++  
Sbjct: 90  QFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWN 149

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            LI+MY+K GN  SA+++F     K + SWN ++ G+  +G  +EA  L  ++++   +P
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSM-----STDYNIIPTIEHYSCMVDLLGKAGYLD 857
           D  TF ++L AC ++  V++G + ++ +      TD  +       + ++++  K G + 
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV------GTALINMHIKCGDIG 263

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK--LEPCNSANYNLMMNL 915
           +A      +P + D   W +++     HG  + A    +R+ +  ++P   A     ++L
Sbjct: 264 DATKVFDNLPTR-DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVA----FVSL 318

Query: 916 LAMSNRWEDVE---RLRHSMDEVG 936
           L   N  E +E   ++   M EVG
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVG 342


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Vitis vinifera]
          Length = 785

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 282/810 (34%), Positives = 438/810 (54%), Gaps = 73/810 (9%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV-- 355
            T  L+   K    + G  +HA +IK G    V L   LMNFY K   +  A+++F E+  
Sbjct: 17   TSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPV 76

Query: 356  ----------------SDLE------------DDLLWNEIIMVKLRNEKWENAIKLFREM 387
                              LE            D + W  +I+   +  ++ENAI +FREM
Sbjct: 77   KSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREM 136

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                      T+  +L +CA V     G+++H +V+K  L S +SV N L++MY+++   
Sbjct: 137  VSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDP 196

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
              A  VFD MK  + SSWN+MISS+   G VD+A   F +M    I+ D+++WN ++SG+
Sbjct: 197  VTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQM----IERDVVSWNAMISGY 252

Query: 508  FTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
              HG  +  L +   M      +P+  +++  L A   L  LK G++ H +I+R   D  
Sbjct: 253  NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTF 312

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
              VG +L+ MY K+  ++ AQ++ +           S+IS                    
Sbjct: 313  GAVGNALISMYSKSGGVEIAQKIIEQ----------SMISNL------------------ 344

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                 D++++ +L+ GY   G    A  I   ++      +VV WT++I G +QN   ++
Sbjct: 345  -----DVIAFTALLDGYVKLGDINPARRIFDSLR----VRDVVAWTAMIVGYVQNGFNQD 395

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +++ F  M +E  KPN+ T++++L     L  L +G++IH    ++G      V+  LI 
Sbjct: 396  AMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALIT 455

Query: 747  MYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            MY+KSG++  AR VF      +   +W  MI+  A +G G+EA+ LF  +LE G +PD I
Sbjct: 456  MYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHI 515

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            T+  +L+AC + GLVE+G  Y++ M   + IIPT  HY+CM+DL G+AG L EA  FI  
Sbjct: 516  TYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIEN 575

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP +PD   WG+LL SC++H ++E AE+A+ RL  +EP NS  Y+ + N+ +   +WE+ 
Sbjct: 576  MPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENA 635

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
              +R SM + GVK    +SW+QI   VH+F  +   HP    IY  +  +  E+KK+G+V
Sbjct: 636  ANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFV 695

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            PDT  V  D++EE K ++L  H+EKLAI +GL+ T     +R++KN RVC+DCH+A K++
Sbjct: 696  PDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFI 755

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S + GREI +RD  RFHHF+ G CSC D W
Sbjct: 756  SKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 262/584 (44%), Gaps = 77/584 (13%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
           FL  + KF+   + KS HA++IK G +     ++ +L+  Y + G    A + F     +
Sbjct: 19  FLQRSLKFKDPFTGKSIHARIIKAG-LHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVK 77

Query: 257 SYADWSSFLEDYESFGGEVQELLEVW---------------------GELHGKGVIFRSR 295
           S   W+  L  Y   GG ++E   V+                     G+      +FR  
Sbjct: 78  SVFSWNIILSGYAK-GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREM 136

Query: 296 I----------LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
           +          LT +L  C  +    +G +VH+ ++K G    + +  +L+N Y K  D 
Sbjct: 137 VSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDP 196

Query: 346 ESANKLFSEVSDLEDDLLWNEII-------MVKLRNEKWEN------------------- 379
            +A  +F  +  L+    WN +I       +V L   ++E                    
Sbjct: 197 VTAKIVFDRMK-LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQH 255

Query: 380 -----AIKLFREMQF-SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                A+ +F +M   SS+K    T+   L ACA +     GKQIH +++++  ++  +V
Sbjct: 256 GFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAV 315

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLS--SWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            N LISMYS++  +E+A ++ +     NL   ++ +++  Y  LG ++ A  +F+ +   
Sbjct: 316 GNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSL--- 372

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
           R++ D++ W  ++ G+  +G  Q+ + L R M   G +PN  +++ +L   + L  L +G
Sbjct: 373 RVR-DVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHG 431

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCF 610
           R+ H    R+G    + V  +L+ MY K+  + +A+ VF+ +   R+ + W S+I     
Sbjct: 432 RQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQ 491

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVV 669
            GL   A  +  +M E  IKPD +++  ++S  +  G  ++     + M+N+  I P   
Sbjct: 492 HGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPS 551

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +  +I    +    +E+  F   M    I+P+     SLL +C
Sbjct: 552 HYACMIDLFGRAGLLQEAHAFIENMP---IEPDVIAWGSLLASC 592


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Brachypodium distachyon]
          Length = 661

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/661 (37%), Positives = 373/661 (56%), Gaps = 35/661 (5%)

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
             + +H   + S L  +  V + L+  Y R      A  VFD M + N+  W+++I+ Y+ 
Sbjct: 36   ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSA 95

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
             G  + AW L  +M S+ ++P++ITWN L+SG    G   + +T L  M S GF P+ + 
Sbjct: 96   RGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATG 155

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            VS  L AV +++ +  G++ HGY+++ G   D  V T+L+DMY K         VF    
Sbjct: 156  VSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVF---- 211

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                                            E    D+ S N+LV+G S   Q  EAL+
Sbjct: 212  -------------------------------HESSHMDVASCNALVAGLSRNAQVSEALL 240

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            +       G+  NVV+WTS+++  +QN    E++  F  MQ   ++PNS T+  +L    
Sbjct: 241  LFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFA 300

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             +  L +G+  HC  L+ GF+ D YV + L+DMY+K G  + AR +F    ++ + SWN 
Sbjct: 301  NVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNA 360

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MI G+A++G+   A+ LF  + +   +PD +TFT +L AC  +GL EEG +YF+ M   +
Sbjct: 361  MIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGH 420

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             I P +EHY+CMV LLG++G LDEA+D I  MPF+PD+ IWG+LLGSCR++G++  AE+A
Sbjct: 421  GISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVA 480

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            + +LF+LEP N+ NY L+ N+ A    W+ V R+R  M  +G+K     SWI+I   VH+
Sbjct: 481  AEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHM 540

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
              A    HP    I  +L  L  EM +LG+ P    V  D++E+EK  +L  H+EKLA+ 
Sbjct: 541  LLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVA 600

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
             GL+ T+   P+RVIKN R+C DCH A K++S    REI +RD  RFHHF++G+CSC D 
Sbjct: 601  LGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDY 660

Query: 1075 W 1075
            W
Sbjct: 661  W 661



 Score =  169 bits (428), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 193/384 (50%), Gaps = 7/384 (1%)

Query: 334 ALMNFYGKCRDVESANKLFSEV--SDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFS 390
           AL+  Y    D E+A  L  ++  + +E +++ WN ++    R+ +  +A+     M   
Sbjct: 88  ALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSE 147

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                +  +   L A   V     GKQ+HGYV+K+    +  V   LI MY +  + +  
Sbjct: 148 GFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEI 207

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            RVF      +++S N++++  +    V  A  LF +     ++ ++++W  +++    +
Sbjct: 208 VRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQN 267

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G     + L R MQS+G  PN  ++  VL A   +  L +GR +H + LR G  +D+YVG
Sbjct: 268 GRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVG 327

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           ++L+DMY K    ++A+ +FD M +RN+V+WN++I GY   G   NA ++   M++ + K
Sbjct: 328 SALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQK 387

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLK 689
           PDLV++  ++   S  G ++E     + M+   GI P +  +  +++   ++    E+  
Sbjct: 388 PDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYD 447

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
              +M  E   P+S    SLL +C
Sbjct: 448 LINEMPFE---PDSCIWGSLLGSC 468



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 154/409 (37%), Gaps = 85/409 (20%)

Query: 165 NSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIW 224
           NS+ +    ++ PP   L   A  SC +                  ++ HA  +  G   
Sbjct: 5   NSLYHFLRHVSFPPDPHLLPSALKSCPAQPL--------------ARALHAAAVVSG--L 48

Query: 225 NSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG----------- 272
             D  V S + H Y+  G   +A   F     ++   WS+ +  Y + G           
Sbjct: 49  AEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQ 108

Query: 273 -----------------------GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
                                  G   + +     +H +G    +  ++  L     +  
Sbjct: 109 MRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKE 168

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC---------------RDVESANKLFSE 354
             +G +VH  ++K G   D  +  AL++ YGKC                DV S N L + 
Sbjct: 169 VSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAG 228

Query: 355 VS---DLEDDLL----------------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
           +S    + + LL                W  I+   ++N +   A+ LFR MQ    +  
Sbjct: 229 LSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPN 288

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           S TI  +L A A V A   G+  H + L+     ++ V + L+ MY++  K   A  +FD
Sbjct: 289 SVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFD 348

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           +M   N+ SWN+MI  Y   G    A  LF  M   + +PD++T+ C+L
Sbjct: 349 AMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVL 397



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 4/158 (2%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           ++     P+   + S L++C    L    + +H   + +G  +D +VA+ L+  Y + G 
Sbjct: 11  LRHVSFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSYIRLGA 67

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
             +AR VF +   K +  W+ +I G++  G+ + A  L  ++   G +P+ IT+  L++ 
Sbjct: 68  TGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSG 127

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
              SG   +       M ++    P     SC +  +G
Sbjct: 128 LNRSGRALDAVTALVRMHSE-GFFPDATGVSCALSAVG 164



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 3/211 (1%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G   E ++++  +   GV   S  +  +L     + A   G   H   +++GF  DV++ 
Sbjct: 268 GRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVG 327

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KC     A  +F  +    + + WN +I     +    NA++LF  MQ    
Sbjct: 328 SALVDMYAKCGKARHARTIFDAMPS-RNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQ 386

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELAT 451
           K    T   +L AC++ G   EG++    + +   +   +    C++++  R+ KL+ A 
Sbjct: 387 KPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAY 446

Query: 452 RVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
            + + M  + +   W S++ S    G V +A
Sbjct: 447 DLINEMPFEPDSCIWGSLLGSCRVYGNVLLA 477


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 287/912 (31%), Positives = 463/912 (50%), Gaps = 72/912 (7%)

Query: 197  FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFS 255
             L    + R L   K  HAQM++ G     D  + +L+ + Y++      A + F     
Sbjct: 33   LLQNCTRKRLLPEAKRIHAQMVEAG--VGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPR 90

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            R    W+S +  Y   G + ++  +++ E+   G I        IL  C        G +
Sbjct: 91   RDVISWNSLISCYAQQGFK-KKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKK 149

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +H+ +IK G+  D  ++ +L++ YGKC D+  A ++F+ +S   D + +N ++ +  +  
Sbjct: 150  IHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP-RDVVSYNTMLGLYAQKA 208

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
              +  + LF +M          T + +L A        EGK+IH   ++  L S++ V  
Sbjct: 209  YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             L++M  R   ++ A + F  + D                                    
Sbjct: 269  ALVTMCVRCGDVDSAKQAFKGIADR----------------------------------- 293

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D++ +N L++    HG           M+S G   N ++   +L A +  + L+ G+  H
Sbjct: 294  DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
             +I  +G   D+ +G +L+ MY +   L  A+E+F  M  R++++WN++I+GY  +    
Sbjct: 354  SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN-------- 667
             A ++  QM+ E +KP  V++  L+S  +      +  +I   +  SGI  N        
Sbjct: 414  EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473

Query: 668  -----------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                   V++W S+I+G  Q+ +Y  + K F +MQ E+++P++ 
Sbjct: 474  NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T +S+L  C     L+ GK+IH    ++G   D  +   LI+MY + G+L+ AR VF   
Sbjct: 534  TFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP-DAITFTALLAACKNSGLVEEG 823
             ++ + SW  MI G A  G   +AI LF ++   GF+P D  TFT++L+AC ++GLV EG
Sbjct: 594  QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEG 653

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
            ++ F SM ++Y ++PTIEHY C+V LLG+A    EA   I  MPF PDA +W  LLG+CR
Sbjct: 654  YQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACR 713

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            IHG++  AE A+    KL   N A Y L+ N+ A + RW+DV ++R  M+  G++     
Sbjct: 714  IHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGR 773

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            SWI++D I+H F A    HP T EIY EL  L  EM++ GY PDT+ V  D+ +  +   
Sbjct: 774  SWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETS 833

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L +H+E+LAI YGL+KT    PIR+ KN R+C DCHTA+K++S + GREI  RD  RFH 
Sbjct: 834  LCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHS 893

Query: 1064 FREGECSCNDCW 1075
            F+ G+CSC D W
Sbjct: 894  FKNGKCSCEDYW 905



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 230/525 (43%), Gaps = 68/525 (12%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T V +LQ C +     E K+IH  ++++ +  ++ + N LI+MY +   +  A +VF  M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              ++ SWNS+IS Y   G+   A+ LF +M ++   P+ IT+  +L+  ++    +N  
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN-- 146

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
                                            G++ H  I++ G   D  V  SL+ MY
Sbjct: 147 ---------------------------------GKKIHSQIIKAGYQRDPRVQNSLLSMY 173

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            K   L  A++VF  +  R++V++N+++  Y  K        +  QM  E I PD V++ 
Sbjct: 174 GKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYI 233

Query: 638 SLVSGYSIWGQSKEALVI----IHHMKNSGIY---------------------------P 666
           +L+  ++      E   I    +    NS I                             
Sbjct: 234 NLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR 293

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           +VV + +LI+   Q+ +  E+ + + +M+ + +  N TT  S+L  C     L+ GK IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               ++G   D  +   LI MY++ G+L  ARE+F     + L SWN +I G+A   +  
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
           EA+ L+ ++   G +P  +TF  LL+AC NS    +G    + +     I       + +
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANAL 472

Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           +++  + G L EA +       + D   W +++     HG  E A
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETA 516



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 4/187 (2%)

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
           Q    + +  T  +LLQ C    LL   K IH   ++ G   D +++  LI+MY K  ++
Sbjct: 19  QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
             A +VF++   + + SWN +I  +A  G  K+A  LF E+   GF P+ IT+ ++L AC
Sbjct: 79  LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138

Query: 815 KNSGLVEEGWKYFDS-MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            +   +E G K     +   Y   P ++  + ++ + GK G L  A      +  + D  
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQ--NSLLSMYGKCGDLPRARQVFAGISPR-DVV 195

Query: 874 IWGALLG 880
            +  +LG
Sbjct: 196 SYNTMLG 202


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 271/789 (34%), Positives = 426/789 (53%), Gaps = 75/789 (9%)

Query: 320  LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE------------------------- 354
            ++K G  F V+L   LMN Y K      A+ LF+E                         
Sbjct: 1    MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 355  --VSDL---EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
              V DL    D + W  II+   +  ++E+AIK+F +M          T+  +L +CA  
Sbjct: 61   HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120

Query: 410  GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
            G+   GK++H +V+K  L + + V N L++MY++   L++A  VFD MK  N SSWN+MI
Sbjct: 121  GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180

Query: 470  SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG-MQSLGF 528
            S +   G VD+A + F  ++    + DI++WN +++G   HG     L      ++    
Sbjct: 181  SLHMNCGRVDLALAQFELLS----ERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            +P+  S++  L A   L  L +G++ HGYI+R   D    VG +L+ MY K+  ++ A+ 
Sbjct: 237  KPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARR 296

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP-DLVSWNSLVSGYSIWG 647
            +                                  +E+  I   D++++ +L++GY   G
Sbjct: 297  I----------------------------------IEQSGISDLDVIAFTALLNGYVKLG 322

Query: 648  QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                A  I + +K+    P+VV WT++I G +QN    ++++ F  M  E  +PNS T++
Sbjct: 323  DITPARQIFNSLKD----PDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLA 378

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SAN 766
            ++L     +  L +GK+IH   +++G      V   L  MY+K+G++  AR+VF     N
Sbjct: 379  AMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQN 438

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            +   SW  MIM  A +G G+EAI LF ++L  G +PD IT+  +L+AC + GLVE+G  Y
Sbjct: 439  RDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSY 498

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            FD M   + I PT+ HY+CMVDL G+AG L EA+ F+  MP +PD   WG+LL SC+++ 
Sbjct: 499  FDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYK 558

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            +++ A++A+ RL  +EP NS  Y+ + N+ +   +W+D  ++R  M   GVK     SW+
Sbjct: 559  NVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWV 618

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            QI    HVF  E   HP   EIY  +  +  E+KK+G+ PDT  V  D++ E K ++L  
Sbjct: 619  QIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRY 678

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            H+EKLAI +G++ T     +R++KN RVC+DCH A K++S +  REI +RD  RFHHF++
Sbjct: 679  HSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKD 738

Query: 1067 GECSCNDCW 1075
            G CSC D W
Sbjct: 739  GSCSCKDYW 747



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 244/518 (47%), Gaps = 45/518 (8%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + G    A + F L   R    W++ +  Y   G   ++ ++++ ++    V+
Sbjct: 46  TILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMG-RFEDAIKIFVDMVKDKVL 104

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                LT +L  C    +  +G +VH+ ++K G    V +  +L+N Y K  D++ A  +
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF-------------------------RE 386
           F  +  L +   WN +I + +   + + A+  F                           
Sbjct: 165 FDRMK-LRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEA 223

Query: 387 MQF-------SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           +QF       +S K    ++   L ACA +     GKQIHGY++++  +++ +V N LIS
Sbjct: 224 LQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALIS 283

Query: 440 MYSRNNKLELATRVFD--SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           MY+++  +E+A R+ +   + D ++ ++ ++++ Y  LG +  A  +FN +      PD+
Sbjct: 284 MYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLK----DPDV 339

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
           + W  ++ G+  +G   + + + + M S G RPN  +++ +L A + +  L +G++ H  
Sbjct: 340 VAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHAS 399

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVN 616
            +R+G      VG +L  MY K   +  A++VF+ ++ NR+ V+W S+I      GL   
Sbjct: 400 AIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEE 459

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLI 675
           A ++  QM    IKPD +++  ++S  +  G  ++       MKN   I P +  +  ++
Sbjct: 460 AIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMV 519

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               +    +E+ KF   M  E   P+     SLL +C
Sbjct: 520 DLFGRAGLLQEAYKFVENMPME---PDVIAWGSLLSSC 554



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 5/253 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y++ GD T A + F          W++ +  Y    G   + +EV+  +  +G  
Sbjct: 313 ALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQ-NGLNNDAIEVFKTMVSEGPR 371

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S  L  +L   + + +   G ++HAS I+ G      +  AL   Y K   +  A K+
Sbjct: 372 PNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKV 431

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+ +    D + W  +IM   ++   E AI+LF +M     K    T V +L AC   G 
Sbjct: 432 FNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGL 491

Query: 412 FHEGKQIHGYVLKSA--LESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
             +G+     ++K+   ++  LS   C++ ++ R   L+ A +  ++M  + ++ +W S+
Sbjct: 492 VEQGRSYFD-LMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSL 550

Query: 469 ISSYTGLGYVDVA 481
           +SS      VD+A
Sbjct: 551 LSSCKVYKNVDLA 563


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 272/789 (34%), Positives = 420/789 (53%), Gaps = 80/789 (10%)

Query: 296  ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
            I   IL+ C KL    LG +VHA L+  G D    L   L+  Y +   VE A ++F ++
Sbjct: 12   IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 71

Query: 356  SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            S+  +   W  I+ +      +E  IKLF  M     +       K+ +AC+++  +  G
Sbjct: 72   SE-RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            K ++ Y+L    E N  V   ++ M+ +  ++++A R F+ ++                 
Sbjct: 131  KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIE----------------- 173

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                D+  WN ++SG+ + G ++  L + R M   G +PN  ++
Sbjct: 174  ------------------FKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITI 215

Query: 536  SVVLQAVTELRLLKYGRESHGYILR-NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            +  + A T L LL++GRE HGY ++   LD DL VG SL+D Y K   ++ A+  F  +K
Sbjct: 216  ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK 275

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL--VSGYSIWGQSKEA 652
                                               + DLVSWN++  V+G++ +G  K A
Sbjct: 276  -----------------------------------QTDLVSWNAMLAVTGFTQYGDGKAA 300

Query: 653  LVIIHHMKNS-GIYP-----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
            L     M  +  ++      +VV W S+IS   Q+     +L    +M   +++ N+ TM
Sbjct: 301  LEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 360

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
             S L  C  L  L+ GKEIH   ++ G     ++   LIDMY + G+++ +R +F     
Sbjct: 361  VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 420

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            + L SWN MI  + ++G G +A+ LF +    G +P+ ITFT LL+AC +SGL+EEGWKY
Sbjct: 421  RDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKY 480

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F  M T+Y + P +E Y+CMVDLL +AG  +E  +FI  MPF+P+A +WG+LLG+CRIH 
Sbjct: 481  FKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHC 540

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            + + AE A+R LF+LEP +S NY LM N+ + + RWED  ++R  M E GV      SWI
Sbjct: 541  NPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 600

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            ++ + +H F      HP   +I  ++  L  ++K++GYVPDT  V QD+DE+EK   L  
Sbjct: 601  EVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCG 660

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            H+EK+A+ +GL+ T +  P+R+IKN RVC DCH+A K++S V  R+I +RD  RFHHF +
Sbjct: 661  HSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVD 720

Query: 1067 GECSCNDCW 1075
            G CSC D W
Sbjct: 721  GVCSCGDYW 729



 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 255/510 (50%), Gaps = 16/510 (3%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HAQ++  G +   + +   L+  Y + G    A + F     R+   W++ +E Y   G 
Sbjct: 33  HAQLVVNG-VDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG- 90

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           + +E ++++  +  +GV     +   + K C++L  + +G +V+  ++  GF+ +  +K 
Sbjct: 91  DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 150

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           ++++ + KC  ++ A + F E+ + +D  +WN ++       +++ A+ +FR+M     K
Sbjct: 151 SILDMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVK 209

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNNKLELATR 452
             S TI   + AC  +     G++IHGY +K   L+S+L V N L+  Y++   +E+A R
Sbjct: 210 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 269

Query: 453 VFDSMKDHNLSSWNSM--ISSYTGLGYVDVAWSLFNKMN------SSRIQPDIITWNCLL 504
            F  +K  +L SWN+M  ++ +T  G    A   F +M+      S     D++ WN ++
Sbjct: 270 KFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSII 329

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           S     G   N L LLR M       N  ++   L A ++L  L+ G+E H +I+R GLD
Sbjct: 330 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 389

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
              ++  SL+DMY +   +Q ++ +FD M  R++V+WN +IS Y   G  ++A  +  Q 
Sbjct: 390 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 449

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNEN 683
               +KP+ +++ +L+S  S  G  +E       MK    + P V  +  ++    +   
Sbjct: 450 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQ 509

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + E+L+F  +M  E   PN+    SLL  C
Sbjct: 510 FNETLEFIEKMPFE---PNAAVWGSLLGAC 536


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 283/872 (32%), Positives = 454/872 (52%), Gaps = 84/872 (9%)

Query: 245  SAAKAFFLYFSRS-YADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKL 303
            SAA+A F       +  WSS +  Y S  G  ++ L  +  + G+GV      L ++LK 
Sbjct: 54   SAARAVFDEIPDPCHVSWSSLVTAY-SNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK- 111

Query: 304  CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE---VSDLED 360
            C   + F  G +VHA  +      DV +  AL+  YG    V+ A ++F E   V    +
Sbjct: 112  CAPDVRF--GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERN 169

Query: 361  DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
             + WN +I   ++N++  +AI +FREM +S  +        ++ AC        G+Q+HG
Sbjct: 170  AVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHG 229

Query: 421  YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
             V+++  E ++   N L+ MYS+                               LG +++
Sbjct: 230  AVVRTGYEKDVFTANALVDMYSK-------------------------------LGDIEM 258

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            A ++F KM ++    D+++WN  +SG  THG     L LL  M+S G  PN  ++S VL+
Sbjct: 259  AATVFEKMPAA----DVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLK 314

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
            A         GR+ HG++++   D+D +V   L+DMY K+  L +A++VFD M  R+++ 
Sbjct: 315  ACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLIL 374

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------------- 632
            WN+LISG    G       + ++M +E +  D                            
Sbjct: 375  WNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHAL 434

Query: 633  -----LVS----WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                 L+S     N L+  Y   GQ   A+ +    ++     ++++ T++++   Q ++
Sbjct: 435  AEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSD----DIISSTTMMTALSQCDH 490

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              +++K F+QM ++ ++P+S  +SSLL  C  L   + GK++H   +K  F  D +    
Sbjct: 491  GEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNA 550

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            L+  Y+K G+++ A   F     + + SW+ MI G A +G+GK A+ LFH +L+ G  P+
Sbjct: 551  LVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPN 610

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             IT T++L+AC ++GLV++  KYF+SM   + I  T EHY+CM+D+LG+AG L++A + +
Sbjct: 611  HITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELV 670

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              MPF+ +A +WGALLG+ R+H   E   +A+ +LF LEP  S  + L+ N  A +  W+
Sbjct: 671  NNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWD 730

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            ++ ++R  M +  VK     SW++I   VH F      HP T +IY +L  L   M K G
Sbjct: 731  EMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAG 790

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            YVP+      D+D  EK  +L  H+E+LA+ + L+ T S APIRV KN R+C DCH A K
Sbjct: 791  YVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFK 850

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            Y+S +  REI +RD  RFHHF  G CSC D W
Sbjct: 851  YISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 166/668 (24%), Positives = 298/668 (44%), Gaps = 89/668 (13%)

Query: 309 AFWLGVEVHASLIKRGF--DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNE 366
           + + G  +H+ L+K G    F  HL    +  Y +CR   +A  +F E+ D    + W+ 
Sbjct: 19  SLFAGAHLHSHLLKSGLLAGFSNHL----LTLYSRCRLPSAARAVFDEIPD-PCHVSWSS 73

Query: 367 IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
           ++     N    +A+  FR M+          +  +L+ CA    F  G Q+H   + + 
Sbjct: 74  LVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAPDVRF--GAQVHALAVATR 130

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSM----KDHNLSSWNSMISSYTGLGYVDVAW 482
           L  ++ V N L+++Y     ++ A R+FD       + N  SWN+MIS+Y        A 
Sbjct: 131 LVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAI 190

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +F +M           W+                         G RPN    S V+ A 
Sbjct: 191 GVFREM----------VWS-------------------------GERPNEFGFSCVVNAC 215

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
           T  R L+ GR+ HG ++R G + D++   +L+DMY K   ++ A  VF+ M   ++V+WN
Sbjct: 216 TGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWN 275

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQSKEA 652
           + ISG    G    A ++L QM+   + P++ + +S++           G  I G   +A
Sbjct: 276 AFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKA 335

Query: 653 LVIIHHMKNSGIYP---------------------NVVTWTSLISGSLQNENYRESLKFF 691
           +         G+                       +++ W +LISG   +  + E L  F
Sbjct: 336 VADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLF 395

Query: 692 IQMQQE--DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            +M++E  D+  N TT++S+L++      + + +++H L  K G + D++V  GLID Y 
Sbjct: 396 HRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYW 455

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           K G L  A +VF++S +  + S   M+   +   +G++AI LF ++L  G +PD+   ++
Sbjct: 456 KCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSS 515

Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           LL AC +    E+G K   +          +   + +V    K G +++A      +P +
Sbjct: 516 LLNACTSLSAYEQG-KQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPER 574

Query: 870 PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW---EDVE 926
              + W A++G    HGH + A     R+  L+   + N+  + ++L+  N     +D +
Sbjct: 575 GIVS-WSAMIGGLAQHGHGKRALDLFHRM--LDEGVAPNHITLTSVLSACNHAGLVDDAK 631

Query: 927 RLRHSMDE 934
           +   SM E
Sbjct: 632 KYFESMKE 639



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 207/473 (43%), Gaps = 43/473 (9%)

Query: 194 GF-CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFF 251
           GF C +N     R L + +  H  +++ G  +  D     +L+  Y + GD   AA  F 
Sbjct: 207 GFSCVVNACTGSRDLEAGRQVHGAVVRTG--YEKDVFTANALVDMYSKLGDIEMAATVFE 264

Query: 252 LYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFW 311
              +     W++F+    + G +    LE+  ++   G++     L+ +LK C    AF 
Sbjct: 265 KMPAADVVSWNAFISGCVTHGHD-HRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFN 323

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG ++H  ++K   DFD  +   L++ Y K   ++ A K+F +     D +LWN +I   
Sbjct: 324 LGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVF-DFMPRRDLILWNALISGC 382

Query: 372 LRNEKWENAIKLFREMQFSSAK-AISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
             + +    + LF  M+       ++R T+  +L++ A   A    +Q+H    K  L S
Sbjct: 383 SHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLS 442

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           +  V N LI  Y +  +L+ A +VF   +  ++ S  +M+++ +   + + A  LF +M 
Sbjct: 443 DSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQML 502

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
              ++PD                                      +S +L A T L   +
Sbjct: 503 RKGLEPDSFV-----------------------------------LSSLLNACTSLSAYE 527

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G++ H ++++     D++ G +L+  Y K   +++A   F  +  R IV+W+++I G  
Sbjct: 528 QGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLA 587

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
             G    A  + ++M +E + P+ ++  S++S  +  G   +A      MK +
Sbjct: 588 QHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKET 640


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 760

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/761 (34%), Positives = 424/761 (55%), Gaps = 36/761 (4%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA ++K G   D ++   L+  Y        A+ +   + D      ++ +I    + 
Sbjct: 36   QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPD-PTVYSFSSLIYALTKA 94

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + +  +I +F  M        +  +  + + CA++ AF  GKQIH     S L+ +  V 
Sbjct: 95   KLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQ 154

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              L  MY R  ++  A +VFD M + ++ + ++++  Y   G ++    + ++M  S I+
Sbjct: 155  GSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P+I++WN +LSG    G ++  + + + M  LGF P+  +VS VL +V +   L  GR+ 
Sbjct: 215  PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQI 274

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            HGY+++ GL  D  V ++++DMY K+  +    ++FD  +       N+ I+G    GL 
Sbjct: 275  HGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
              A +M    +E++++                                    NVV+WTS+
Sbjct: 335  DKALEMFGLFKEQKMEL-----------------------------------NVVSWTSI 359

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+G  QN    E+L+ F +MQ   +KPN  T+ S+L  CG +  L +G+  H   ++   
Sbjct: 360  IAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
            + D +V + LIDMY+K G +K ++ VF     K L  WN ++ G++++G  KE + +F  
Sbjct: 420  LDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFES 479

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            L+ T  +PD I+FT+LL+AC   GL +EGWKYF+ MS +Y I P +EHYSCMV+LLG+AG
Sbjct: 480  LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAG 539

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             L EA+D I+ +PF+PD+ +WGALL SCR+  +++ AEIA+++LF LEP N   Y LM N
Sbjct: 540  KLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSN 599

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A    W +V+ +R+ M+ +G+K     SWIQ+   V+   A    HP   +I  ++  
Sbjct: 600  IYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDE 659

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            +  EM+K G+ P+     QD++E+E+ ++L  H+EKLA+V+GL+ T    P++VIKN R+
Sbjct: 660  ISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRI 719

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH   K++S   GREIF+RD  RFHHF++G CSC D W
Sbjct: 720  CGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 218/468 (46%), Gaps = 38/468 (8%)

Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
           V+  +   G+I  + +L  + K+C +L AF  G ++H      G D D  ++ +L + Y 
Sbjct: 103 VFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYM 162

Query: 341 KCRDVESANKLFSEVSD---------------------------------LEDDLL-WNE 366
           +C  +  A K+F  +S+                                 +E +++ WN 
Sbjct: 163 RCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNG 222

Query: 367 IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
           I+    R+   + A+ +F++M          T+  +L +       + G+QIHGYV+K  
Sbjct: 223 ILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQG 282

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
           L  +  V + ++ MY ++  +    ++FD  +       N+ I+  +  G VD A  +F 
Sbjct: 283 LLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFG 342

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
                +++ ++++W  +++G   +G     L L R MQ  G +PN  ++  +L A   + 
Sbjct: 343 LFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIA 402

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L +GR +HG+ +R  L  D++VG++L+DMY K   ++ +Q VF+ M  +N+V WNSL++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMN 462

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIY 665
           GY   G       +   +    +KPD +S+ SL+S     G + E     + M    GI 
Sbjct: 463 GYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIK 522

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           P +  ++ +++   +    +E+     ++  E   P+S    +LL +C
Sbjct: 523 PRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFE---PDSCVWGALLNSC 567



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 185/434 (42%), Gaps = 77/434 (17%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-------- 363
           +G ++H  +IK+G   D  +  A+++ YGK   V    KLF E   +E  +         
Sbjct: 270 MGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLS 329

Query: 364 --------------------------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
                                     W  II    +N K   A++LFREMQ +  K    
Sbjct: 330 RNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRV 389

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           TI  ML AC  + A   G+  HG+ ++  L  ++ V + LI MY++  +++++  VF+ M
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMM 449

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG------ 511
              NL  WNS+++ Y+  G      S+F  +  +R++PD I++  LLS     G      
Sbjct: 450 PTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
            Y N+++     +  G +P     S ++  +     L+   E++  I     + D  V  
Sbjct: 510 KYFNMMS-----EEYGIKPRLEHYSCMVNLLGRAGKLQ---EAYDLIKEIPFEPDSCVWG 561

Query: 572 SLMDMYVKNDC-LQN--------AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           +L+     N C LQN        AQ++F +++  N   +  + + Y  KG++     + N
Sbjct: 562 ALL-----NSCRLQNNVDLAEIAAQKLF-HLEPENPGTYVLMSNIYAAKGMWTEVDSIRN 615

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL---ISGSL 679
           +ME   +K +         G S W Q K  +  +     S  +P +   T     IS  +
Sbjct: 616 KMESLGLKKN--------PGCS-WIQVKNKVYTLLACDKS--HPQIDQITEKMDEISEEM 664

Query: 680 QNENYRESLKFFIQ 693
           +   +R +L F +Q
Sbjct: 665 RKSGHRPNLDFALQ 678



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 123/274 (44%), Gaps = 7/274 (2%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +      G ++ E LE++ E+   GV      +  +L  C  + A   G   H   
Sbjct: 356 WTSIIAGCAQNGKDI-EALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++     DVH+  AL++ Y KC  ++ +  +F+ +   ++ + WN ++     + K +  
Sbjct: 415 VRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT-KNLVCWNSLMNGYSMHGKAKEV 473

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLIS 439
           + +F  +  +  K    +   +L AC +VG   EG K  +    +  ++  L   +C+++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVN 533

Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           +  R  KL+ A  +   +  + +   W ++++S      VD+A     K+    ++P+  
Sbjct: 534 LLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKL--FHLEPENP 591

Query: 499 TWNCLLSGHF-THGSYQNVLTLLRGMQSLGFRPN 531
               L+S  +   G +  V ++   M+SLG + N
Sbjct: 592 GTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKN 625


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Cucumis sativus]
          Length = 782

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 277/809 (34%), Positives = 434/809 (53%), Gaps = 75/809 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            IL+   ++   + G  VH  +IK+G    V+L   LM FY K   +  A+ +F E+  L+
Sbjct: 16   ILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP-LK 74

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREM----------------QFSS--------AKAI 395
                WN +I    +   +E + +L  EM                QF          AK I
Sbjct: 75   STFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMI 134

Query: 396  SR-------TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            S        T+  +L +CA       G++IH +V+K  L S + V   L++MY++     
Sbjct: 135  SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPV 194

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            +A  VFD M   N+S+WN++IS Y   G  ++A S F KM       DI++WN ++SG+ 
Sbjct: 195  IAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR----DIVSWNSMISGYS 250

Query: 509  THGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              G     L +   M      +P+  +++ +L A   L  L  G++ H YILR   +   
Sbjct: 251  QQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG 310

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
             VG +L+ MY K+  ++ A+ + ++ +  N+                             
Sbjct: 311  AVGNALISMYAKSGGVEIARLIVEHNRTSNL----------------------------- 341

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                +++++ SL+ GY+  G  K A  I + +++     +VV WT++I G +QN  + ++
Sbjct: 342  ----NIIAFTSLLDGYTKLGNVKPAREIFNKLRDR----DVVAWTAMIVGYVQNGLWNDA 393

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            L+ F  M  E  +PNS T++++L     L +L++GK+IH   +K G      V   LI M
Sbjct: 394  LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAM 453

Query: 748  YSKSGNLKSAREVFR-KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            Y+K+GN+  A+ VF   +  K + SW  MIM  A +G GKEAI LF  +L  G +PD IT
Sbjct: 454  YAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHIT 513

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            +  +L+AC + GLVE+G KY++ M+  + I PT+ HY+CM+DL G+AG L EA+ FI +M
Sbjct: 514  YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            P +PD   WG+LL SC+IH + + A++A+ RL  ++P NS  Y  + N+ +   +WE+  
Sbjct: 574  PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAA 633

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            + R  M + GV+     SWI I   VH F  E   HP   EIY  +  +  E+KK+G++P
Sbjct: 634  QTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIP 693

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            DT  V  D++EE K ++L  H+EKLAI +GL+ T     +R++KN RVC+DCH+A K++S
Sbjct: 694  DTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFIS 753

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             + GREI +RD  RFHHF++G CSC D W
Sbjct: 754  KLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 243/534 (45%), Gaps = 78/534 (14%)

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+  ++   S     +LQ   ++     G+ +H  ++K  L   + + N L++ Y++   
Sbjct: 1   MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           L  A  VFD M   +  SWN++IS Y   G  +V+  L  +M       D ++W  ++ G
Sbjct: 61  LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDC----DPVSWTAIIVG 116

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
           +   G + N + +   M S    P+  +VS VL +    + L  GR+ H ++++ GL   
Sbjct: 117 YNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSC 176

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           + V TSL++MY K      A+ VFD M  +NI  WN+LIS Y   G F  A     +M +
Sbjct: 177 VPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPD 236

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                D+VSWNS++SGYS  G + EALVI   M N                         
Sbjct: 237 R----DIVSWNSMISGYSQQGYNLEALVIFSKMLN------------------------- 267

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK-----NGFIKDAYVA 741
                    +  +KP++ T++S+L  C  L  L  GK+IH   L+     +G + +A ++
Sbjct: 268 ---------EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALIS 318

Query: 742 ----------------------------TGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
                                       T L+D Y+K GN+K ARE+F K  ++ + +W 
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWT 378

Query: 774 CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMST 832
            MI+G+   G   +A+ LF  ++  G +P++ T  A+L+   +  ++E G + +  ++  
Sbjct: 379 AMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKA 438

Query: 833 DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
             +  P++ +   ++ +  K G ++ A         K +   W +++ +   HG
Sbjct: 439 GESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG 490



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 152/355 (42%), Gaps = 46/355 (12%)

Query: 189 SCISSGFCFLNETNKFRCLSSVKSK---HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTS 245
           SC+      LN   K  C   V +K       +K    WN+      LI  Y++ G F  
Sbjct: 175 SCVPVATSLLNMYAK--CGDPVIAKVVFDRMTVKNISTWNA------LISLYMQSGQFEL 226

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           AA  F     R    W+S +  Y   G  ++ L+     L+   +   +  L  IL  C 
Sbjct: 227 AASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACA 286

Query: 306 KLMAFWLGVEVHASLIK---------------------------------RGFDFDVHLK 332
            L    +G ++HA +++                                 R  + ++   
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAF 346

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L++ Y K  +V+ A ++F+++ D  D + W  +I+  ++N  W +A++LFR M     
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRD-RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGP 405

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +  S T+  ML   + +     GKQIH   +K+   S  SV N LI+MY++   + +A R
Sbjct: 406 EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKR 465

Query: 453 VFD-SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           VFD       + SW SMI +    G    A +LF +M S  ++PD IT+  +LS 
Sbjct: 466 VFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 3/242 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G+   A + F     R    W++ +  Y    G   + LE++  +  +G  
Sbjct: 348 SLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ-NGLWNDALELFRLMVNEGPE 406

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S  L  +L + + L     G ++HAS IK G      +  AL+  Y K  ++  A ++
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRV 466

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F   +  ++ + W  +IM   ++   + AI LF  M     K    T V +L AC  VG 
Sbjct: 467 FDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGL 526

Query: 412 FHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G++ +  + +   +E  LS   C+I +Y R   L+ A    +SM  + +  +W S++
Sbjct: 527 VEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLL 586

Query: 470 SS 471
           +S
Sbjct: 587 AS 588


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Cucumis sativus]
          Length = 782

 Score =  498 bits (1281), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/815 (34%), Positives = 435/815 (53%), Gaps = 75/815 (9%)

Query: 294  SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
            S     IL+   ++   + G  VH  +IK+G    V+L   LM FY K   +  A+ +F 
Sbjct: 10   SEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFD 69

Query: 354  EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM----------------QFSS------ 391
            E+  L+    WN +I    +   +E + +L  EM                QF        
Sbjct: 70   EMP-LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIW 128

Query: 392  --AKAISR-------TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
              AK IS        T+  +L +CA       G++IH +V+K  L S + V   L++MY+
Sbjct: 129  MFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYA 188

Query: 443  RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
            +     +A  VFD M   N+S+WN++IS Y   G  ++A S F KM       DI++WN 
Sbjct: 189  KCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR----DIVSWNS 244

Query: 503  LLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
            ++SG+   G     L +   M      +P+  +++ +L A   L  L  G++ H YILR 
Sbjct: 245  MISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304

Query: 562  GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
              +    VG +L+ MY K+  ++ A+ + ++ +  N+                       
Sbjct: 305  ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL----------------------- 341

Query: 622  NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                      +++++ SL+ GY+  G  K A  I + +++     +VV WT++I G +QN
Sbjct: 342  ----------NIIAFTSLLDGYTKLGNVKPAREIFNKLRDR----DVVAWTAMIVGYVQN 387

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
              + ++L+ F  M  E  +PNS T++++L     L +L++GK+IH   +K G      V 
Sbjct: 388  GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 742  TGLIDMYSKSGNLKSAREVFR-KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
              LI MY+K+GN+  A+ VF   +  K + SW  MIM  A +G GKEAI LF  +L  G 
Sbjct: 448  NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +PD IT+  +L+AC + GLVE+G KY++ M+  + I PT+ HY+CM+DL G+AG L EA+
Sbjct: 508  KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
             FI +MP +PD   WG+LL SC+IH + + A++A+ RL  ++P NS  Y  + N+ +   
Sbjct: 568  LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            +WE+  + R  M + GV+     SWI I   VH F  E   HP   EIY  +  +  E+K
Sbjct: 628  KWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIK 687

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            K+G++PDT  V  D++EE K ++L  H+EKLAI +GL+ T     +R++KN RVC+DCH+
Sbjct: 688  KMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHS 747

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            A K++S + GREI +RD  RFHHF++G CSC D W
Sbjct: 748  AIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  189 bits (481), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 242/534 (45%), Gaps = 78/534 (14%)

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+  ++   S     +LQ   ++     G+ +H  ++K  L   + + N L++ Y++   
Sbjct: 1   MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           L  A  VFD M   +  SWN++IS Y   G  +V+  L  +M       D ++W  ++ G
Sbjct: 61  LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDC----DPVSWTAIIVG 116

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
           +   G + N + +   M S    P+  +VS VL +    + L  GR+ H ++++ GL   
Sbjct: 117 YNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSC 176

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           + V TSL++MY K      A+ VFD M  +NI  WN+LIS Y   G F  A     +M +
Sbjct: 177 VPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPD 236

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                D+VSWNS++SGYS  G + EAL I   M N                         
Sbjct: 237 R----DIVSWNSMISGYSQQGYNLEALAIFSKMLN------------------------- 267

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK-----NGFIKDAYVA 741
                    +  +KP++ T++S+L  C  L  L  GK+IH   L+     +G + +A ++
Sbjct: 268 ---------EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALIS 318

Query: 742 ----------------------------TGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
                                       T L+D Y+K GN+K ARE+F K  ++ + +W 
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWT 378

Query: 774 CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMST 832
            MI+G+   G   +A+ LF  ++  G +P++ T  A+L+   +  ++E G + +  ++  
Sbjct: 379 AMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKA 438

Query: 833 DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
             +  P++ +   ++ +  K G ++ A         K +   W +++ +   HG
Sbjct: 439 GESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG 490



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 151/355 (42%), Gaps = 46/355 (12%)

Query: 189 SCISSGFCFLNETNKFRCLSSVKSK---HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTS 245
           SC+      LN   K  C   V +K       +K    WN+      LI  Y++ G F  
Sbjct: 175 SCVPVATSLLNMYAK--CGDPVIAKVVFDRMTVKNISTWNA------LISLYMQSGQFEL 226

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           AA  F     R    W+S +  Y   G  ++ L      L+   +   +  L  IL  C 
Sbjct: 227 AASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACA 286

Query: 306 KLMAFWLGVEVHASLIK---------------------------------RGFDFDVHLK 332
            L    +G ++HA +++                                 R  + ++   
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAF 346

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L++ Y K  +V+ A ++F+++ D  D + W  +I+  ++N  W +A++LFR M     
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRD-RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGP 405

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +  S T+  ML   + +     GKQIH   +K+   S  SV N LI+MY++   + +A R
Sbjct: 406 EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKR 465

Query: 453 VFD-SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           VFD       + SW SMI +    G    A +LF +M S  ++PD IT+  +LS 
Sbjct: 466 VFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 3/242 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G+   A + F     R    W++ +  Y    G   + LE++  +  +G  
Sbjct: 348 SLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ-NGLWNDALELFRLMVNEGPE 406

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S  L  +L + + L     G ++HAS IK G      +  AL+  Y K  ++  A ++
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRV 466

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F   +  ++ + W  +IM   ++   + AI LF  M     K    T V +L AC  VG 
Sbjct: 467 FDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGL 526

Query: 412 FHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G++ +  + +   +E  LS   C+I +Y R   L+ A    +SM  + +  +W S++
Sbjct: 527 VEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLL 586

Query: 470 SS 471
           +S
Sbjct: 587 AS 588


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 290/826 (35%), Positives = 419/826 (50%), Gaps = 75/826 (9%)

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            LH KG    S     +L+ C K     +G +VH  +++ G   +V++   L+  Y  C  
Sbjct: 35   LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            V  A +LF + S+ +  + WN +I         + A  LF  MQ    +    T V +L 
Sbjct: 95   VNEARRLFDKFSN-KSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILS 153

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
            AC+   A + G+++H  V+++ L +N +V N L                           
Sbjct: 154  ACSSPAALNWGREVHVRVMEAGLANNATVGNAL--------------------------- 186

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                IS Y   G V  A  +F+ M S     D ++W  L   +   G  Q  L     M 
Sbjct: 187  ----ISMYAKCGSVRDARRVFDAMASR----DEVSWTTLTGAYAESGYAQESLKTYHAML 238

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
              G RP+  +   VL A   L  L+ G++ H  I+ +    D+ V T+L  MY+K   ++
Sbjct: 239  QEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVK 298

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------- 636
            +A+EVF+ + NR+++AWN++I G    G    A  M ++M +E + PD V++        
Sbjct: 299  DAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACA 358

Query: 637  ---------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                                       N+L++ YS  G  K+A  +   M       +VV
Sbjct: 359  RPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR----DVV 414

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +WT+L+ G        ES   F +M Q+ ++ N  T   +L+ C     L+ GKEIH   
Sbjct: 415  SWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEV 474

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            +K G   D  VA  L+ MY K G+++ A  V    + + + +WN +I G A  G G EA+
Sbjct: 475  VKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEAL 534

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
              F  +     +P+A TF  +++AC+   LVEEG + F SM  DY I+PT +HY+CMVD+
Sbjct: 535  QKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDI 594

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L +AG+L EA D I TMPFKP A +WGALL +CR HG++E  E A+ +  KLEP N+  Y
Sbjct: 595  LARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTY 654

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
              +  + A +  W DV +LR  M E GVK     SWI++   VH F A    HP T EIY
Sbjct: 655  VSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIY 714

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             EL  L  ++K LGYVPDTR V  D+D+E K + +  H+EKLAI YGL+ T    PIRV 
Sbjct: 715  SELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVS 774

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVC+DCHTA K++S + GREI  RD  RFHHF+ GECSC D W
Sbjct: 775  KNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/636 (23%), Positives = 274/636 (43%), Gaps = 125/636 (19%)

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
           M+    + W     + + +    ++  S   VK+LQ+C K      GKQ+H ++L+  ++
Sbjct: 17  MIPTSTDGWYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMK 76

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            N+ + N L+ +Y     +  A R+FD   + ++ SWN MIS Y   G    A++LF  M
Sbjct: 77  PNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLM 136

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
               ++PD  T+  +LS                                   A +    L
Sbjct: 137 QQEGLEPDKFTFVSILS-----------------------------------ACSSPAAL 161

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
            +GRE H  ++  GL  +  VG +L+ MY K   +++A+ VFD M +R+ V+W +L   Y
Sbjct: 162 NWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 221

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------------------------- 642
              G    + K  + M +E ++P  +++ +++S                           
Sbjct: 222 AESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDV 281

Query: 643 ---------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
                    Y   G  K+A  +   + N     +V+ W ++I G + +    E+   F +
Sbjct: 282 RVSTALTKMYIKCGAVKDAREVFECLPNR----DVIAWNTMIGGLVDSGQLEEAHGMFHR 337

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M +E + P+  T  ++L  C   G L  GKEIH   +K+G + D      LI+MYSK+G+
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           +K AR+VF +   + + SW  ++ G+A  G   E+   F ++L+ G + + IT+  +L A
Sbjct: 398 MKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKA 457

Query: 814 CKNS-----------------------------------GLVEEGWKYFDSMSTDYNIIP 838
           C N                                    G VE+  +  + MST      
Sbjct: 458 CSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR----- 512

Query: 839 TIEHYSCMVDLLGKAGYLDEA---WDFIRTMPFKPDATIWGALLGSCRIH-----GHLEY 890
            +  ++ ++  L + G   EA   ++ +++   +P+AT +  ++ +CR+      G  ++
Sbjct: 513 DVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQF 572

Query: 891 AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
           A +  R+ + + P    +Y  M+++LA +    + E
Sbjct: 573 ASM--RKDYGIVP-TEKHYACMVDILARAGHLGEAE 605



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 159/663 (23%), Positives = 285/663 (42%), Gaps = 112/663 (16%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L    K + L+  K  H  +++ G   N   ++ +L+  Y+  G    A + F  + ++
Sbjct: 50  LLQSCVKAKDLAVGKQVHEHILRFGMKPNVY-IINTLLKLYVHCGSVNEARRLFDKFSNK 108

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           S   W+  +  Y +  G  QE   ++  +  +G+         IL  C+   A   G EV
Sbjct: 109 SVVSWNVMISGY-AHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREV 167

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H  +++ G   +  +  AL++ Y KC  V  A ++F  ++   D++ W  +      +  
Sbjct: 168 HVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS-RDEVSWTTLTGAYAESGY 226

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            + ++K +  M     +    T + +L AC  + A  +GKQIH  +++S   S++ V   
Sbjct: 227 AQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTA 286

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           L  MY +   ++ A  VF+ + + ++ +WN+MI      G ++ A  +F++M    + PD
Sbjct: 287 LTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPD 346

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            +T+  +LS                       RP G               L  G+E H 
Sbjct: 347 RVTYLAILSA--------------------CARPGG---------------LACGKEIHA 371

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
             +++GL  D+  G +L++MY K   +++A++VFD M  R++V+W +L+ GY   G  V 
Sbjct: 372 RAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVE 431

Query: 617 A----KKMLNQMEE---------------------------EEIK----PDLVSWNSLVS 641
           +    KKML Q  E                           E +K     DL   N+L+S
Sbjct: 432 SFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMS 491

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            Y   G  ++A+ +   M       +VVTW +LI G  QN    E+L+ F  M+ E+++P
Sbjct: 492 MYFKCGSVEDAIRVSEGMSTR----DVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRP 547

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREV 760
           N+TT  +++  C    L++ G+       K+ G +        ++D+ +++G+L  A +V
Sbjct: 548 NATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDV 607

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
                                             +L   F+P A  + ALLAAC+  G V
Sbjct: 608 ----------------------------------ILTMPFKPSAAMWGALLAACRAHGNV 633

Query: 821 EEG 823
           E G
Sbjct: 634 EIG 636



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 237/520 (45%), Gaps = 44/520 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H ++++ G + N+  +  +LI  Y + G    A + F    SR    W++    Y    G
Sbjct: 168 HVRVMEAG-LANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAE-SG 225

Query: 274 EVQELLEVWGELHGKGVIFRSRILTI-ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             QE L+ +  +  +GV   SRI  + +L  C  L A   G ++HA +++     DV + 
Sbjct: 226 YAQESLKTYHAMLQEGV-RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVS 284

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL   Y KC  V+ A ++F  + +  D + WN +I   + + + E A  +F  M     
Sbjct: 285 TALTKMYIKCGAVKDAREVFECLPN-RDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECV 343

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                T + +L ACA+ G    GK+IH   +K  L S++   N LI+MYS+   ++ A +
Sbjct: 344 APDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQ 403

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VFD M   ++ SW +++  Y   G V  ++S F KM    ++ + IT+ C          
Sbjct: 404 VFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMC---------- 453

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                    VL+A +    LK+G+E H  +++ G+  DL V  +
Sbjct: 454 -------------------------VLKACSNPVALKWGKEIHAEVVKAGIFADLAVANA 488

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           LM MY K   +++A  V + M  R++V WN+LI G    G  + A +    M+ EE++P+
Sbjct: 489 LMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPN 548

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
             ++ +++S   +    +E       M K+ GI P    +  ++    +  +  E+    
Sbjct: 549 ATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVI 608

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
           + M     KP++    +LL  C   G ++ G++    CLK
Sbjct: 609 LTMP---FKPSAAMWGALLAACRAHGNVEIGEQAAEQCLK 645


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 293/898 (32%), Positives = 451/898 (50%), Gaps = 87/898 (9%)

Query: 218  IKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQ- 276
            IK  KI     M   LI  Y + G+  SA + F     +    W+  L      GG VQ 
Sbjct: 130  IKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLL------GGYVQH 183

Query: 277  ----ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
                E   +  ++   GV         +L  C        G E+ + ++  G+D D+ + 
Sbjct: 184  RRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVG 243

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             AL+N + KC  V+ A K+F+ +    D + W  +I    R+ +++ A  LF+ M+    
Sbjct: 244  TALINMHIKCGGVDDALKVFNNLPR-RDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +      V +L+AC    A  +GK++H  + +  L++ + V   L+SMY++   +E A  
Sbjct: 303  QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            VF+ +K  N                                   +++W  +++G   HG 
Sbjct: 363  VFNLVKGRN-----------------------------------VVSWTAMIAGFAQHGR 387

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
             +        M   G  PN  +   +L A +    LK GR+ H  I++ G   D  V T+
Sbjct: 388  MEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTA 447

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+ MY K   L +A+ VF+ +  +N+VAWN++I+ Y     + NA      + +E IKPD
Sbjct: 448  LLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPD 507

Query: 633  ------------------LVSW-----------------NSLVSGYSIWGQSKEALVIIH 657
                              L  W                 N+LVS +   G    A+ + +
Sbjct: 508  SSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFN 567

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
             M       ++V+W ++I+G +Q+   + +  +F  MQ+  +KP+  T + LL  C    
Sbjct: 568  DMPER----DLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPE 623

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             L  G+ +H L  +     D  V TGLI MY+K G++  A  VF     K + SW  MI 
Sbjct: 624  ALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMIT 683

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            G+A +G GKEA+ LF ++ + G +PD ITF   L+AC ++GL++EG  +F+SM  D+NI 
Sbjct: 684  GYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMK-DFNIE 742

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P +EHY CMVDL G+AG L EA +FI  M  KPD+ +WGALLG+C++H  +E AE  +++
Sbjct: 743  PRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQK 802

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
              +L+P +   Y ++ N+ A +  W++V ++R  M + GV      SWI++D  VH+F +
Sbjct: 803  KLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCS 862

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
            +   HP   EI+ EL  L  EMKKLGYVPDTR V  D+++ EK   L  H+E+LAI YGL
Sbjct: 863  DDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGL 922

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +KT    PI + KN RVC DCHTA K +S +  R+I  RD  RFHHF++G CSC D W
Sbjct: 923  LKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 165/648 (25%), Positives = 301/648 (46%), Gaps = 69/648 (10%)

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G++ E + V   +    +    +  + +L+LC K      G  +H  +       D+
Sbjct: 80  SKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDI 139

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +   L++ Y KC +  SA ++F E+ D +D   WN ++   +++ ++E A +L  +M  
Sbjct: 140 FMWNMLISMYAKCGNTNSAKQIFDEMPD-KDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQ 198

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              K    T V ML ACA      +G ++   +L +  +++L V   LI+M+ +   ++ 
Sbjct: 199 DGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDD 258

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VF+++   +L +W SMI+          A +LF  M    +QPD + +  L      
Sbjct: 259 ALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL------ 312

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                        L+A      L+ G+  H  +   GLD ++YV
Sbjct: 313 -----------------------------LKACNHPEALEQGKRVHARMKEVGLDTEIYV 343

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GT+L+ MY K   +++A EVF+ +K RN+V+W ++I+G+   G    A    N+M E  I
Sbjct: 344 GTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGI 403

Query: 630 KPDLVSWNSLV---------------------SGYSIWGQSKEALVIIHH-----MKNSG 663
           +P+ V++ S++                     +GY    + + AL+ ++      M    
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN 463

Query: 664 IYP-----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
           ++      NVV W ++I+  +Q+E Y  ++  F  + +E IKP+S+T +S+L  C     
Sbjct: 464 VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDA 523

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L+ GK +  L ++ GF  D ++   L+ M+   G+L SA  +F     + L SWN +I G
Sbjct: 524 LELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAG 583

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
           F  +G  + A   F  + E+G +PD ITFT LL AC +   + EG +   ++ T+  +  
Sbjct: 584 FVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG-RRLHALITEAALDC 642

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            +   + ++ +  K G +D+A      +P K +   W +++     HG
Sbjct: 643 DVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHG 689



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 210/442 (47%), Gaps = 44/442 (9%)

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G     + +L  + S   + +  + S +LQ   + + L  G   H +I  + +  D+++ 
Sbjct: 83  GQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMW 142

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
             L+ MY K     +A+++FD M ++++ +WN L+ GY     +  A ++  QM ++ +K
Sbjct: 143 NMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVK 202

Query: 631 P-----------------------------------DLVSWNSLVSGYSIWGQSKEALVI 655
           P                                   DL    +L++ +   G   +AL +
Sbjct: 203 PDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKV 262

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
            +++       +++TWTS+I+G  ++  ++++   F  M++E ++P+     SLL+ C  
Sbjct: 263 FNNLPRR----DLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNH 318

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
              L+ GK +H    + G   + YV T L+ MY+K G+++ A EVF     + + SW  M
Sbjct: 319 PEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAM 378

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
           I GFA +G  +EA L F++++E+G +P+ +TF ++L AC     +++G +  D +     
Sbjct: 379 IAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRI-IKAG 437

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I      + ++ +  K G L +A +    +  K +   W A++ +   H   + A    
Sbjct: 438 YITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATF 496

Query: 896 RRLFK--LEPCNSANYNLMMNL 915
           + L K  ++P +S+ +  ++N+
Sbjct: 497 QALLKEGIKP-DSSTFTSILNV 517


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/667 (38%), Positives = 378/667 (56%), Gaps = 43/667 (6%)

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK--DHNLSSWNSMISSY 472
             + +H     S L  +  V + L+  Y R      A  +FD M      +  W+++++++
Sbjct: 36   ARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAH 95

Query: 473  TGLGYVDVAWSLFNKMN-SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF-RP 530
               G  + AW L  +M     ++P++ITWN L+SG    G  ++ +  L  M   G  RP
Sbjct: 96   AARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRP 155

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ--E 588
            + + VS  L AV ++ L+  G++ HGY ++ G   D  V T+L+DMY K  C Q A+   
Sbjct: 156  DATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGK--CGQAAEVVR 213

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
            VFD                                   E    D+ S N+L++G S   Q
Sbjct: 214  VFD-----------------------------------ESSHMDVASCNALIAGLSRNAQ 238

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
              EAL +     + G+  NVV+WTS+++  +QN    E+++FF +MQ +  +PNS T+  
Sbjct: 239  VCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPC 298

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            +L     +  L +G+  HC  L+ GF+ D YV++ L+DMY+K G +K AR +F    ++ 
Sbjct: 299  VLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRN 358

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            + SWN MI G+A+YG    A+ +FH +L+   +PD +TFT LLAAC  +GL EEG  YF 
Sbjct: 359  VVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFK 418

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
             M  +Y + P +EHY+CMV LLG+AG LDEA+D I  MPF+PDA IWG+LLGSCR+HG++
Sbjct: 419  EMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNV 478

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
            + AE+A+ +LF LEP N+ NY L+ N+ A    W+ V R+R  M +VG+K     SWI+I
Sbjct: 479  DLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEI 538

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
               VH+  A    HP    I  ++  L  +M+KLG+VP T  V  D++E+EK  +L  H+
Sbjct: 539  KNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHS 598

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            EKLA+  GL+ T     +RVIKN R+C DCH A K++S   GREI +RD  RFHHF  G+
Sbjct: 599  EKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGK 658

Query: 1069 CSCNDCW 1075
            CSC D W
Sbjct: 659  CSCGDFW 665



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 189/386 (48%), Gaps = 9/386 (2%)

Query: 334 ALMNFYGKCRDVESANKLFSEV---SDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQF 389
           AL+  +    D E A +L  E+     +E +++ WN ++    R+ +  +A+     M  
Sbjct: 90  ALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHG 149

Query: 390 SSAKAISRTIVK-MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                   T V   L A   VG    G+Q+HGY +K+   ++  V   LI MY +  +  
Sbjct: 150 EGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAA 209

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
              RVFD     +++S N++I+  +    V  A  LF +     ++ ++++W  +++   
Sbjct: 210 EVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCV 269

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            +G     +   R MQ+ G  PN  ++  VL A   +  L +GR +H + LR G  +D+Y
Sbjct: 270 QNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVY 329

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           V ++L+DMY K   +++A+ +FD M +RN+V+WN++I GY   G  VNA  M + M + +
Sbjct: 330 VSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCK 389

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRES 687
            KPD+V++  L++  +  G ++E       M N  G+ P +  +  +++   +     E+
Sbjct: 390 QKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEA 449

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTC 713
                 M  E   P++    SLL +C
Sbjct: 450 YDLISDMPFE---PDAYIWGSLLGSC 472



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 181/401 (45%), Gaps = 75/401 (18%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           ++ + F P+   +    ++   L L    R  H     +GL  D +V +SL+  Y++   
Sbjct: 11  LRHVSFPPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67

Query: 583 LQNAQEVFDNM--KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSL 639
             NA+ +FD M    R +V W++L++ +  +G    A ++L +M  +  ++P++++WN L
Sbjct: 68  TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           VSG +  G++++A+V +  M   G+                                  +
Sbjct: 128 VSGLNRSGRARDAVVALATMHGEGL----------------------------------L 153

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           +P++T +S  L   G +GL+  G+++H   +K G   DA V T LIDMY K G       
Sbjct: 154 RPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVR 213

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VF +S++  +AS N +I G +      EA+ LF E ++ G + + +++T+++A C  +G 
Sbjct: 214 VFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGK 273

Query: 820 VEEGWKYFDSM---STDYN------IIPTIEHY-------------------------SC 845
             E  ++F  M    T+ N      ++P   +                          S 
Sbjct: 274 DLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSA 333

Query: 846 MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           +VD+  K G + +A     TM  + +   W A++G   ++G
Sbjct: 334 LVDMYAKCGRVKDARIIFDTMVSR-NVVSWNAMIGGYAMYG 373



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 37/270 (13%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G  ++ +     +HG+G++      ++  L     +    +G ++H   +K G   D  +
Sbjct: 135 GRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACV 194

Query: 332 KCALMNFYGKC---------------RDVESAN----------------KLFSEVSDLED 360
             AL++ YGKC                DV S N                +LF E  D   
Sbjct: 195 VTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGV 254

Query: 361 DL---LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
           +L    W  I+   ++N K   A++ FREMQ    +  S TI  +L A A V A   G+ 
Sbjct: 255 ELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRS 314

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG- 476
            H + L+     ++ V + L+ MY++  +++ A  +FD+M   N+ SWN+MI  Y   G 
Sbjct: 315 AHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGE 374

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            V+  W +F+ M   + +PD++T+ CLL+ 
Sbjct: 375 AVNAVW-MFHSMLKCKQKPDMVTFTCLLAA 403



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 9/214 (4%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+  E +E + E+  +G    S  +  +L     + A   G   H   +++GF  DV++ 
Sbjct: 272 GKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVS 331

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KC  V+ A  +F  +    + + WN +I       +  NA+ +F  M     
Sbjct: 332 SALVDMYAKCGRVKDARIIFDTMVS-RNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQ 390

Query: 393 KAISRTIVKMLQACAKVGAFHEG----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
           K    T   +L AC + G   EG    K++H    +  +   +    C++++  R  KL+
Sbjct: 391 KPDMVTFTCLLAACTQAGLTEEGRHYFKEMHN---EYGVSPRMEHYACMVTLLGRAGKLD 447

Query: 449 LATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
            A  +   M  + +   W S++ S    G VD+A
Sbjct: 448 EAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 816

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/814 (33%), Positives = 448/814 (55%), Gaps = 81/814 (9%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL-KCALMNFYGKCRDVESANKLFSEVS 356
             I+L+LCT L       ++   +IK GF ++ HL +  L++ + K   +  A ++F  V 
Sbjct: 48   AILLELCTSLKELH---QILPLIIKNGF-YNEHLFQTKLISLFCKFNSITEAARVFEPV- 102

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            + + D+L++ ++    +N    +A++ +  M+      +      +LQ   +      G+
Sbjct: 103  EHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGR 162

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +IHG V+ +  +SNL     ++++Y++  ++E A ++F+ M                   
Sbjct: 163  EIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP------------------ 204

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                             Q D+++WN +++G+  +G  +  + ++  MQ  G +P+  ++ 
Sbjct: 205  -----------------QRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLV 247

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             VL AV +L+ L+ GR  HGY  R G +Y + V T+++D Y K   +++A+ VF  M +R
Sbjct: 248  SVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSR 307

Query: 597  NIVAWNSLISGYCFKG----LFVNAKKMLNQ----------------------------- 623
            N+V+WN++I GY   G     F    KML++                             
Sbjct: 308  NVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVH 367

Query: 624  --MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
              ++E++I  D+   NSL+S YS   +   A  +  ++K    +  VVTW ++I G  QN
Sbjct: 368  RLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLK----HKTVVTWNAMILGYAQN 423

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                E+L  F +MQ  DIKP+S T+ S++     L + +  K IH L ++    K+ +V 
Sbjct: 424  GCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC 483

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            T LID ++K G +++AR++F     + + +WN MI G+   G+G+EA+ LF+E+     +
Sbjct: 484  TALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVK 543

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+ ITF +++AAC +SGLVEEG  YF+SM  +Y + PT++HY  MVDLLG+AG LD+AW 
Sbjct: 544  PNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWK 603

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            FI+ MP KP  T+ GA+LG+CRIH ++E  E  +  LF L+P +   + L+ N+ A ++ 
Sbjct: 604  FIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASM 663

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            W+ V R+R +M++ G++     S +++   VH F +    HP +  IY  L  L  EMK 
Sbjct: 664  WDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKA 723

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
             GYVPDT  ++ D++E+ K ++L SH+E+LAI +GL+ T+    I + KN RVC DCH A
Sbjct: 724  AGYVPDTNSIH-DVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEA 782

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KY+SLV GREI +RD  RFHHF+ G CSC D W
Sbjct: 783  TKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 132/564 (23%), Positives = 247/564 (43%), Gaps = 73/564 (12%)

Query: 217 MIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQ 276
           +IK G  +N       LI  + +F   T AA+ F     +    + + L+ Y      ++
Sbjct: 67  IIKNG-FYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAK-NSTLR 124

Query: 277 ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALM 336
           + +  +  +    V+      T +L+L  + +    G E+H  +I  GF  ++    A++
Sbjct: 125 DAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVV 184

Query: 337 NFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS 396
           N Y KCR +E A K+F  +    D + WN ++    +N     A+++  +MQ +  K  S
Sbjct: 185 NLYAKCRQIEDAYKMFERMPQ-RDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDS 243

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            T+V +L A A + A   G+ IHGY  ++  E  ++V   ++  Y +   +  A  VF  
Sbjct: 244 ITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKG 303

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP--------------------- 495
           M   N+ SWN+MI  Y   G  + A++ F KM    ++P                     
Sbjct: 304 MSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG 363

Query: 496 --------------DIITWNCLLS---------------GHFTH---------------- 510
                         D+   N L+S               G+  H                
Sbjct: 364 RYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQN 423

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G     L L   MQS   +P+  ++  V+ A+ +L + +  +  HG  +R  +D +++V 
Sbjct: 424 GCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC 483

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T+L+D + K   +Q A+++FD M+ R+++ WN++I GY   G    A  + N+M+   +K
Sbjct: 484 TALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVK 543

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLK 689
           P+ +++ S+++  S  G  +E +     MK N G+ P +  + +++    +     ++ K
Sbjct: 544 PNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWK 603

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
           F   +Q   +KP  T + ++L  C
Sbjct: 604 F---IQDMPVKPGITVLGAMLGAC 624


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/822 (34%), Positives = 432/822 (52%), Gaps = 74/822 (9%)

Query: 289  GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            GV F S     +LK C  +     G E+H  +IK G+D  V +  +L++ Y KC D+  A
Sbjct: 5    GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 349  NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             KLF  +++  D + WN II     N +   A+ LFREMQ +   A + T+V  LQAC  
Sbjct: 65   RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
                  G +IH  +LKS    ++ V N L++M+ R  K+  A R+FD +           
Sbjct: 125  SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELD---------- 174

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                                     + D ITWN +++G   +G Y   L    G+Q    
Sbjct: 175  -------------------------EKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANL 209

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            +P+  S+  +L A   L  L  G+E H Y ++N LD +L +G +L+DMY K  C+  A  
Sbjct: 210  KPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGL 269

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK------------------ 630
            VFD M N+++++W ++I+ Y        A K+L +++ + +                   
Sbjct: 270  VFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRC 329

Query: 631  ----------------PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                             DL+  N ++  Y+  G    A  +   +K      +VV+WTS+
Sbjct: 330  LSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFESIK----CKDVVSWTSM 385

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            IS  + N    E+L  F  M++  ++P+S T+ S+L     L  L  GKEIH    + GF
Sbjct: 386  ISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGF 445

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
            + +      L+DMY+  G+L++A +VF  + +K+L  W  MI  + ++G GK A+ LF  
Sbjct: 446  MLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSI 505

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            + +    PD ITF ALL AC +SGL+ EG +  ++M   Y + P  EHY+C+VDLLG+A 
Sbjct: 506  MEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRAN 565

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
            +L+EA+ F+++M  +P A +W A LG+CRIH + +  EIA+++L  L+P +  +Y L+ N
Sbjct: 566  HLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISN 625

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A S RW+DVE +R  M   G+K     SWI++   VH F      HP + +IY +L  
Sbjct: 626  VFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQ 685

Query: 975  LVSEMKKL-GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
            +  +++K  GYVP T+ V  ++ +EEK ++L  H+E+LAI YGLM T    PIR+ KN R
Sbjct: 686  ITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLR 745

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            VC DCHT  K +S    RE+ +RD +RFHHF +G CSC D W
Sbjct: 746  VCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 156/631 (24%), Positives = 283/631 (44%), Gaps = 87/631 (13%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRS-YADWSSFLEDYESF 271
           H  +IK G  ++S   V  SL+  Y +  D   A K F     R+    W+S +  Y S 
Sbjct: 33  HGLIIKCG--YDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAY-SL 89

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
            G+  E L ++ E+   GV   +  L   L+ C       LG+E+HA+++K     DV++
Sbjct: 90  NGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYV 149

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             AL+  + +   +  A ++F E+ D +D++ WN +I    +N  +  A++ F  +Q ++
Sbjct: 150 ANALVAMHVRFGKMSYAARIFDEL-DEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDAN 208

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            K    +++ +L A  ++G    GK+IH Y +K+ L+SNL + N LI MYS+   +  A 
Sbjct: 209 LKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAG 268

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
            VFD M + +L SW ++I++Y                            NC         
Sbjct: 269 LVFDKMINKDLISWTTVIAAYA-------------------------QNNC--------- 294

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
            +   L LLR +Q+ G   +   +   L A + LR L + +E HGY L+ GL  DL +  
Sbjct: 295 -HTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQN 352

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            ++D+Y     +  A  +F+++K +++V+W S+IS Y   GL   A  +   M+E  ++P
Sbjct: 353 MIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEP 412

Query: 632 DLVSW-----------------------------------NSLVSGYSIWGQSKEALVII 656
           D ++                                    NSLV  Y+  G  + A  + 
Sbjct: 413 DSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVF 472

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
              ++     ++V WT++I+    +   + +++ F  M+ + + P+  T  +LL  C   
Sbjct: 473 ICTRS----KSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHS 528

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
           GL+  GK +    +K  +  + +      L+D+  ++ +L+ A    +    +  A   C
Sbjct: 529 GLINEGKRL-LETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWC 587

Query: 775 MIMGFA-IYGNGKEAILLFHELLETGFQPDA 804
             +G   I+ N K   +   +LL+    PD+
Sbjct: 588 AFLGACRIHSNKKLGEIAAQKLLD--LDPDS 616



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 156/333 (46%), Gaps = 42/333 (12%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M+ LG   +  +   VL+A   +  +  G E HG I++ G D  ++V  SL+ MY K + 
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 583 LQNAQEVFDNMKNRN-IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP---------- 631
           +  A+++FD M  RN +V+WNS+IS Y   G  + A  +  +M++  +            
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 632 -------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                                    D+   N+LV+ +  +G+   A  I   +       
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDE----K 176

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           + +TW S+I+G  QN  Y E+L+FF  +Q  ++KP+  ++ S+L   G LG L NGKEIH
Sbjct: 177 DNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIH 236

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
              +KN    +  +   LIDMYSK   +  A  VF K  NK L SW  +I  +A      
Sbjct: 237 AYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHT 296

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           EA+ L  ++   G   D +   + L AC  SGL
Sbjct: 297 EALKLLRKVQTKGMDVDTMMIGSTLLAC--SGL 327


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/761 (33%), Positives = 421/761 (55%), Gaps = 36/761 (4%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA ++K G   D ++   L+  Y        A+ +   + D      ++ +I    + 
Sbjct: 36   QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD-PTIYSFSSLIYALTKA 94

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + +  +I +F  M        S  +  + + CA++ AF  GKQIH     S L+ +  V 
Sbjct: 95   KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              +  MY R  ++  A +VFD M D ++ + ++++ +Y   G ++    + ++M SS I+
Sbjct: 155  GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             +I++WN +LSG    G ++  + + + +  LGF P+  +VS VL +V +  +L  GR  
Sbjct: 215  ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            HGY+++ GL  D  V ++++DMY K+  +     +F+         +  + +G C     
Sbjct: 275  HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ--------FEMMEAGVC----- 321

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                                  N+ ++G S  G   +AL +    K   +  NVV+WTS+
Sbjct: 322  ----------------------NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+G  QN    E+L+ F +MQ   +KPN  T+ S+L  CG +  L +G+  H   ++   
Sbjct: 360  IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
            + + +V + LIDMY+K G +  ++ VF     K L  WN ++ GF+++G  KE + +F  
Sbjct: 420  LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            L+ T  +PD I+FT+LL+AC   GL +EGWKYF  MS +Y I P +EHYSCMV+LLG+AG
Sbjct: 480  LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             L EA+D I+ MPF+PD+ +WGALL SCR+  +++ AEIA+ +LF LEP N   Y L+ N
Sbjct: 540  KLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSN 599

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A    W +V+ +R+ M+ +G+K     SWIQ+   V+   A    HP   +I  ++  
Sbjct: 600  IYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDE 659

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            +  EM+K G+ P+      D++E+E+ ++L  H+EKLA+V+GL+ T    P++VIKN R+
Sbjct: 660  ISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRI 719

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH   K++S   GREIF+RD  RFHHF++G CSC D W
Sbjct: 720  CGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 213/469 (45%), Gaps = 40/469 (8%)

Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
           V+  +   G+I  S +L  + K+C +L AF +G ++H      G D D  ++ ++ + Y 
Sbjct: 103 VFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYM 162

Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA------ 394
           +C  +  A K+F  +SD +D +  + ++    R    E  +++  EM+ S  +A      
Sbjct: 163 RCGRMGDARKVFDRMSD-KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221

Query: 395 ----------ISRTIVKMLQACAKVG-------------------AFHEGKQIHGYVLKS 425
                       +  V M Q    +G                     + G+ IHGYV+K 
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ 281

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
            L  +  V + +I MY ++  +     +F+  +       N+ I+  +  G VD A  +F
Sbjct: 282 GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMF 341

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
                  ++ ++++W  +++G   +G     L L R MQ  G +PN  ++  +L A   +
Sbjct: 342 ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNI 401

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
             L +GR +HG+ +R  L  +++VG++L+DMY K   +  +Q VF+ M  +N+V WNSL+
Sbjct: 402 AALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GI 664
           +G+   G       +   +    +KPD +S+ SL+S     G + E       M    GI
Sbjct: 462 NGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGI 521

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            P +  ++ +++   +    +E+     +M  E   P+S    +LL +C
Sbjct: 522 KPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWGALLNSC 567



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 41/359 (11%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE------------ 359
           +G  +H  +IK+G   D  +  A+++ YGK   V     LF++   +E            
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329

Query: 360 -----DDLL-----------------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
                D  L                 W  II    +N K   A++LFREMQ +  K    
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           TI  ML AC  + A   G+  HG+ ++  L  N+ V + LI MY++  ++ L+  VF+ M
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              NL  WNS+++ ++  G      S+F  +  +R++PD I++  LLS     G      
Sbjct: 450 PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509

Query: 518 TLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV-GTSLMD 575
              + M +  G +P     S ++  +     L+   E++  I     + D  V G  L  
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ---EAYDLIKEMPFEPDSCVWGALLNS 566

Query: 576 MYVKN--DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
             ++N  D  + A E   +++  N   +  L + Y  KG++     + N+ME   +K +
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 9/301 (2%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +      G ++ E LE++ E+   GV      +  +L  C  + A   G   H   
Sbjct: 356 WTSIIAGCAQNGKDI-EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++     +VH+  AL++ Y KC  +  +  +F+ +   ++ + WN ++     + K +  
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT-KNLVCWNSLMNGFSMHGKAKEV 473

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLIS 439
           + +F  +  +  K    +   +L AC +VG   EG K       +  ++  L   +C+++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533

Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           +  R  KL+ A  +   M  + +   W ++++S      VD+A     K+    ++P+  
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL--FHLEPENP 591

Query: 499 TWNCLLSGHF-THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
               LLS  +   G +  V ++   M+SLG + N     +  Q    +  L  G +SH  
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI--QVKNRVYTLLAGDKSHPQ 649

Query: 558 I 558
           I
Sbjct: 650 I 650


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 248/643 (38%), Positives = 360/643 (55%), Gaps = 35/643 (5%)

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            V + L+  Y R      A  V D M    +  W+++I+++   G  + AW L  +M S  
Sbjct: 57   VASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDG 116

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            ++P++ITWN L+SG    G  ++ +  L  M   GF P+ + VS  L AV ++  +  G 
Sbjct: 117  VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGE 176

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + HGY+++ G   D  V T+L+DMY K         VFD                     
Sbjct: 177  QLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFD--------------------- 215

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                          E    D+ S N+LV+G S   Q  EAL +       GI  NVV+WT
Sbjct: 216  --------------ESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWT 261

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            S+++  +QN    E++  F +MQ E I+PNS T+  +L     +  L +G+  HC  L+ 
Sbjct: 262  SIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRK 321

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF  D YV + L+DMY+K G ++ AR +F     + + SWN MI G+A++G  + A+ LF
Sbjct: 322  GFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLF 381

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
              +  +  +PD +TFT +L AC  +G  EEG  YF+ M   + I P +EHY+CMV LLG+
Sbjct: 382  RSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGR 441

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG LD+A+D I  MPF+PD  IWG+LLGSCR+HG++  AE+A+  LF+LEP N+ NY L+
Sbjct: 442  AGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLL 501

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A    W+ V RLR  M  VG+K     SWI+I   VH+  A  + HP    I  +L
Sbjct: 502  SNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKL 561

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
             HL  EM++LG+ P T  V  D++E+EK  +L  H+EKLA+  GL+ T    P++VIKN 
Sbjct: 562  KHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNL 621

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH A K++S    REI++RD  RFHHF++G+CSC D W
Sbjct: 622  RICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 139/344 (40%), Gaps = 68/344 (19%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG---------------- 272
           +  SL+  YL FG    A         R+   WS+ +  + S G                
Sbjct: 57  VASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDG 116

Query: 273 ------------------GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
                             G  ++ +     +HG+G +  +  ++  L     +    +G 
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGE 176

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE--------------- 359
           ++H  ++K G   D  +  AL++ YGKC   +   ++F E S ++               
Sbjct: 177 QLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNA 236

Query: 360 -------------------DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV 400
                              + + W  I+   ++N +   A+ LFREMQ    +  S TI 
Sbjct: 237 QVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIP 296

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +L A A + A   G+  H + L+     ++ V + L+ MY++  ++  A  +F++M   
Sbjct: 297 CVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR 356

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           N+ SWN+MI  Y   G  + A  LF  M SS+ +PD++T+ C+L
Sbjct: 357 NVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVL 400



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 3/211 (1%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G   E ++++ E+  +G+   S  +  +L     + A   G   H   +++GF  D+++ 
Sbjct: 271 GRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVG 330

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KC  V  A  +F E     + + WN +I     + + ENA++LFR MQ S  
Sbjct: 331 SALVDMYAKCGRVRDARMIF-EAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKE 389

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVL-KSALESNLSVCNCLISMYSRNNKLELAT 451
           K    T   +L AC++ G   EG+     +  K  +   +    C++++  R  KL+ A 
Sbjct: 390 KPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAY 449

Query: 452 RVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
            + + M  + +   W S++ S    G V +A
Sbjct: 450 DIINQMPFEPDGCIWGSLLGSCRVHGNVVLA 480


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/805 (34%), Positives = 428/805 (53%), Gaps = 75/805 (9%)

Query: 312  LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII--- 368
            LG   HA ++  G   D  L   L+  Y KC  + SA ++F    +  D + WN I+   
Sbjct: 95   LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPE-RDLVTWNAILGAY 153

Query: 369  --MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
               V   +   +  + LFR ++ S       T+  +L+ C   G     + +HGY +K  
Sbjct: 154  AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIG 213

Query: 427  LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
            LE ++ V   L+++YS+  ++  A  +FD M++ ++  WN M+  Y  LG    A+ LF+
Sbjct: 214  LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 273

Query: 487  KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            + + S ++PD  +   +L+G    G+                                  
Sbjct: 274  EFHRSGLRPDEFSVQLILNGCLWAGTDD-------------------------------- 301

Query: 547  LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
             L+ G++ HG  +++GLD D+ V  SL++MY K  C   A+EVF++MK+ ++++WNS+IS
Sbjct: 302  -LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMIS 360

Query: 607  GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---------------SGYSIWGQSKE 651
                  L   +  +   +  E +KPD  +  S+                 G  I   + +
Sbjct: 361  SCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIK 420

Query: 652  A---------------LVIIHHMKNSGIY------PNVVTWTSLISGSLQNENYRESLKF 690
            A                +    M N+GI       P+ V WTS+ISG + N N  ++L+ 
Sbjct: 421  AGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 480

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            + +M+Q  + P+  T ++L++    +  L+ G+++H   +K   + D +V T L+DMY+K
Sbjct: 481  YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 540

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             GN++ A  +F+K   + +A WN M++G A +GN +EA+ LF  +   G +PD ++F  +
Sbjct: 541  CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 600

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L+AC ++GL  E ++Y  SM  DY I P IEHYSC+VD LG+AG + EA   I TMPFK 
Sbjct: 601  LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 660

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
             A+I  ALLG+CRI G +E  +  + RLF LEP +SA Y L+ N+ A +NRW+DV   R 
Sbjct: 661  SASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARK 720

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
             M    VK    +SWI +  ++H+F  +   HP    IY ++  ++  +++ GYVPDT  
Sbjct: 721  MMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEF 780

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
            V  D+++EEK + L  H+EKLAI YGL+ T +   IRVIKN RVC DCH A KY+S V  
Sbjct: 781  VLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFE 840

Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
            REI LRD  RFHHFR+G CSC D W
Sbjct: 841  REIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 140/565 (24%), Positives = 243/565 (43%), Gaps = 69/565 (12%)

Query: 170 SPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDM 229
           S T + L P   L       C++SG           CL + +  H   IK+G  W  D  
Sbjct: 180 STTRMTLAPVLKL-------CLNSG-----------CLWAAEGVHGYAIKIGLEW--DVF 219

Query: 230 VK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           V  +L+  Y + G    A   F     R    W+  L+ Y   G E +E  +++ E H  
Sbjct: 220 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLE-KEAFQLFSEFHRS 278

Query: 289 GVIFRSRILTIILKLC--TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           G+      + +IL  C         LG +VH   +K G D DV +  +L+N Y K     
Sbjct: 279 GLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAY 338

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA-----ISRTIVK 401
            A ++F+++  L D + WN +I    ++   E ++ LF ++     K       S T+  
Sbjct: 339 FAREVFNDMKHL-DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLAT 397

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
             +AC  +    +GKQIH + +K+  +S+L V + ++ MY +   +  A  VF+ +    
Sbjct: 398 AAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS--- 454

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                            PD + W  ++SG   +G+    L +  
Sbjct: 455 --------------------------------APDDVAWTSMISGCVDNGNEDQALRIYH 482

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M+     P+  + + +++A + +  L+ GR+ H  +++     D +VGTSL+DMY K  
Sbjct: 483 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 542

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            +++A  +F  M  RNI  WN+++ G    G    A  +   M+   I+PD VS+  ++S
Sbjct: 543 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 602

Query: 642 GYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             S  G + EA   +H M N  GI P +  ++ L+    +    +E+ K    M     K
Sbjct: 603 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP---FK 659

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEI 725
            +++   +LL  C   G ++ GK +
Sbjct: 660 ASASINRALLGACRIQGDVETGKRV 684



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 174/394 (44%), Gaps = 59/394 (14%)

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L  G+ +H  I+ +G   D ++  +L+ MY K   L +A++VFD    R++V WN+++  
Sbjct: 93  LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152

Query: 608 YCFK------------GLFVNAKKMLNQMEEEEIKPDL---------------------- 633
           Y                LF   +  L       + P L                      
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 212

Query: 634 -VSWNSLVSG-----YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
            + W+  VSG     YS  G+ ++A ++   M+      +VV W  ++ G +Q    +E+
Sbjct: 213 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER----DVVLWNMMLKGYVQLGLEKEA 268

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTC--GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            + F +  +  ++P+  ++  +L  C   G   L+ GK++H + +K+G   D  VA  L+
Sbjct: 269 FQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLV 328

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD-- 803
           +MYSK G    AREVF    +  L SWN MI   A     +E++ LF +LL  G +PD  
Sbjct: 329 NMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHF 388

Query: 804 ---AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA- 859
              +IT      AC    L+++G K   + +        +   S ++D+  K G +  A 
Sbjct: 389 TLASITLATAAKACGCLVLLDQG-KQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAG 447

Query: 860 --WDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             +++I      PD   W +++  C  +G+ + A
Sbjct: 448 IVFNYISA----PDDVAWTSMISGCVDNGNEDQA 477



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 19/182 (10%)

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           LL+T      L  GK  H   + +G   D +++  L+ MYSK G+L SAR+VF  +  + 
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 769 LASWNCMIMGFAIY-----GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV--- 820
           L +WN ++  +A       GN +E + LF  L  +      +T   +L  C NSG +   
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA---WDFIRTMPFKPDATIWGA 877
           E    Y   +  ++++  +      +V++  K G + +A   +D++R    + D  +W  
Sbjct: 203 EGVHGYAIKIGLEWDVFVS----GALVNIYSKCGRMRDARLLFDWMR----ERDVVLWNM 254

Query: 878 LL 879
           +L
Sbjct: 255 ML 256


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Glycine max]
          Length = 923

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 304/939 (32%), Positives = 471/939 (50%), Gaps = 81/939 (8%)

Query: 173  SLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS 232
            SL L  T  LA  ++L    S    L+     + L   +  HA+++K      S  +   
Sbjct: 30   SLTLLSTHPLATPSRLEHAHS--LLLDLCVAVKALPQGQQLHARLLKSHL---SAFLATK 84

Query: 233  LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
            L+  Y + G    A K F     R+   W++ +  + S  G+  E +E++ E+   GV  
Sbjct: 85   LLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVS-SGKYLEAIELYKEMRVLGVAI 143

Query: 293  RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
             +     +LK C  L    LG E+H   +K GF   V +  AL+  YGKC D+  A  LF
Sbjct: 144  DACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLF 203

Query: 353  SEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
              +  + ED + WN II   +   K   A+ LFR MQ     + + T V  LQ       
Sbjct: 204  DGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSF 263

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               G  IHG  LKS   +++ V N LI+MY++  ++E A RVF SM              
Sbjct: 264  VKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM-------------- 309

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                                 +  D ++WN LLSG   +  Y++ L   R MQ+   +P+
Sbjct: 310  ---------------------LCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              SV  ++ A      L  G+E H Y +RNGLD ++ +G +L+DMY K  C+++    F+
Sbjct: 349  QVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFE 408

Query: 592  NMKNRNIVAWNSLISGYC----------------FKGLFVN---------------AKKM 620
             M  +++++W ++I+GY                  KG+ V+               ++  
Sbjct: 409  CMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468

Query: 621  LNQMEEEEIKPDLVS---WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
            + ++     K DL      N++V+ Y   G    A      +++     ++V+WTS+I+ 
Sbjct: 469  IREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSK----DIVSWTSMITC 524

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             + N    E+L+ F  ++Q +I+P+S  + S L     L  L+ GKEIH   ++ GF  +
Sbjct: 525  CVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLE 584

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
              +A+ L+DMY+  G ++++R++F     + L  W  MI    ++G G EAI LF ++ +
Sbjct: 585  GPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTD 644

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
                PD ITF ALL AC +SGL+ EG ++F+ M   Y + P  EHY+CMVDLL ++  L+
Sbjct: 645  ENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLE 704

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA+ F+R+MP KP + +W ALLG+C IH + E  E+A++ L + +  NS  Y L+ N+ A
Sbjct: 705  EAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFA 764

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
               RW DVE +R  M   G+K     SWI++D  +H F A    HP T +IY +L     
Sbjct: 765  ADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTK 824

Query: 978  EM-KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
             + KK GY+  T+ V+ ++ EEEK ++L  H+E+LA+ YGL+ T     IR+ KN R+C 
Sbjct: 825  LLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICD 884

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            DCHT  K  S V  R + +RD  RFHHF  G CSC D W
Sbjct: 885  DCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Brachypodium distachyon]
          Length = 940

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 294/900 (32%), Positives = 456/900 (50%), Gaps = 78/900 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            HA  +  G +   D  + + L+F Y + G    A   F    SR+   W++ +  Y S  
Sbjct: 81   HAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLS-S 139

Query: 273  GEVQELLEVWGELH---GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
            G   E L V+  +      GV      L  +LK          G EVH   +K G D   
Sbjct: 140  GSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRST 199

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
             +  AL+  Y KC  ++SA ++F  + D  D   WN +I   L+N  +  A+ LFR MQ 
Sbjct: 200  FVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQR 259

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            +     S T V +LQ C ++   + G+++H  +LKS  E N+  CN L+ MY++      
Sbjct: 260  AVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ-CNALLVMYTK------ 312

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
                                      G VD A  +F +++    + D I+WN +LS +  
Sbjct: 313  -------------------------CGRVDSALRVFREID----EKDYISWNSMLSCYVQ 343

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
            +G Y   +  +  M   GF+P+ + +  +  AV  L  L  G+E H Y ++  LD D  V
Sbjct: 344  NGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQV 403

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
            G +LMDMY+K   ++ +  VFD M+ ++ ++W ++I+ Y      + A ++  + ++E I
Sbjct: 404  GNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGI 463

Query: 630  KPDLVSWNSLVSGYS-------------------------------IWGQSKEALVIIHH 658
            K D +   S++   S                               I+G+  E   + H 
Sbjct: 464  KVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGE---VYHS 520

Query: 659  MK--NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            +K   +    ++VTWTS+I+    +    E+L  F +MQ  D++P+S  + S+L   GGL
Sbjct: 521  LKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGL 580

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
              L  GKE+H   ++  F  +  + + L+DMYS  G+L  A +VF     K +  W  MI
Sbjct: 581  SSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMI 640

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
                ++G+GK+AI LF  +L+TG  PD ++F ALL AC +S LV EG  Y D M + Y +
Sbjct: 641  NATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRL 700

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P  EHY+C+VDLLG++G  +EA++FI++MP KP + +W +LLG+CR+H + E A +A+ 
Sbjct: 701  EPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAAN 760

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            RL +LEP N  NY L+ N+ A   +W + + +R  + E G++     SWI+I   VH F+
Sbjct: 761  RLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFT 820

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKL-GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                 H     I  +L  +   ++K  GY  DTR V  D+ EEEK  VL  H+E+LAI +
Sbjct: 821  TRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISF 880

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ T+   P+R+ KN RVC DCH   K +S +  R+I +RD  RFHHF  G CSC D W
Sbjct: 881  GLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 299/902 (33%), Positives = 451/902 (50%), Gaps = 80/902 (8%)

Query: 211  KSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
            K  HA +I+ G  + SD  V++ L+  Y++ G    A   F     R+   W+  +    
Sbjct: 50   KKIHAHIIQSG--FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLA 107

Query: 270  SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
             +G   QE    + ++  +G I  S     IL       A     EVH+  +  G   D+
Sbjct: 108  HYG-RGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDL 166

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
             +  AL++ Y K   ++ A  +F  + +  D   W  +I    ++ + + A  LF +M+ 
Sbjct: 167  RVGNALVHMYAKSGSIDDARVVFDGMVE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQMER 225

Query: 390  SSAKAISRTIVKMLQACA--KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                    T + +L A A    GA    K++H +  K+   S+L V N LI MY++    
Sbjct: 226  GGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAK---- 281

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
                                        G +D A  +F+ M       D+I+WN ++ G 
Sbjct: 282  ---------------------------CGSIDDARLVFDGM----CDRDVISWNAMIGGL 310

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              +G      T+   MQ  GF P+ ++   +L         ++ +E H + +  GL  DL
Sbjct: 311  AQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDL 370

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
             VG++ + MY++   + +AQ +FD +  RN+  WN++I G   +     A  +  QM  E
Sbjct: 371  RVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRRE 430

Query: 628  EIKPDLVSW----------------------------------NSLVSGYSIWGQSKEAL 653
               PD  ++                                  N+LV  Y+  G +  A 
Sbjct: 431  GFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAK 490

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +   M    +  NV TWT +ISG  Q+    E+   F+QM +E I P++TT  S+L  C
Sbjct: 491  QVFDDM----VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSAC 546

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
               G L+  KE+H   +  G + D  V   L+ MY+K G++  AR VF     + + SW 
Sbjct: 547  ASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWT 606

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             MI G A +G G +A+ LF ++   GF+P+  +F A+L+AC ++GLV+EG + F S++ D
Sbjct: 607  VMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQD 666

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            Y I PT+EHY+CMVDLLG+AG L+EA  FI  MP +P    WGALLG+C  +G+LE AE 
Sbjct: 667  YGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEF 726

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A++   KL+P +++ Y L+ N+ A +  WE    +R  M   G++     SWI++D  +H
Sbjct: 727  AAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIH 786

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             F      HP + EIY +L  L+  +K  GYVPDTR V ++ D+E K + L SH+EKLAI
Sbjct: 787  SFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAI 846

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            VYGLM T  R PIRV KN RVCSDCHTA K++S V GREI  RD  RFHHF++G CSC D
Sbjct: 847  VYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGD 906

Query: 1074 CW 1075
             W
Sbjct: 907  YW 908



 Score =  246 bits (628), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 170/646 (26%), Positives = 297/646 (45%), Gaps = 70/646 (10%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  ++ ++V+ ++  +G          ILK C   ++   G ++HA +I+ GF  DV ++
Sbjct: 9   GYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVE 68

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+N Y KC  ++ A  +F ++ +  + + W  +I       + + A   F +MQ    
Sbjct: 69  TALVNMYVKCGSIDDAQLIFDKMVE-RNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGF 127

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
              S T V +L A A  GA    K++H + + + L  +L V N L+ MY+++  ++ A  
Sbjct: 128 IPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 187

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VFD M + ++ SW  MI      G    A+SLF +M      P++ T+  +L+       
Sbjct: 188 VFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNA------ 241

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                       A+T    L++ +E H +  + G   DL VG +
Sbjct: 242 ---------------------------SAITSTGALEWVKEVHKHAGKAGFISDLRVGNA 274

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+ MY K   + +A+ VFD M +R++++WN++I G    G    A  +  +M++E   PD
Sbjct: 275 LIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPD 334

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP-------------------------- 666
             ++ SL++ +   G  +    +  H    G+                            
Sbjct: 335 STTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFD 394

Query: 667 -----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                NV TW ++I G  Q +  RE+L  F+QM++E   P++TT  ++L    G   L+ 
Sbjct: 395 KLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEW 454

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            KE+H   +  G + D  V   L+ MY+K GN   A++VF     + + +W  MI G A 
Sbjct: 455 VKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQ 513

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW-KYFDSMSTDYNIIPTI 840
           +G G EA  LF ++L  G  PDA T+ ++L+AC ++G +E  W K   S + +  ++  +
Sbjct: 514 HGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE--WVKEVHSHAVNAGLVSDL 571

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
              + +V +  K G +D+A      M  + D   W  ++G    HG
Sbjct: 572 RVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHG 616



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 195/417 (46%), Gaps = 45/417 (10%)

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++ G+  +G  ++ + +   M+  G +PN  +   +L+A      LK+G++ H +I+++G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
              D+ V T+L++MYVK   + +AQ +FD M  RN+++W  +I G    G    A     
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 623 QMEEEEIKP-----------------------------------DLVSWNSLVSGYSIWG 647
           QM+ E   P                                   DL   N+LV  Y+  G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
              +A V+   M    +  ++ +WT +I G  Q+   +E+   F+QM++    PN TT  
Sbjct: 181 SIDDARVVFDGM----VERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYL 236

Query: 708 SLLQTCG--GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
           S+L        G L+  KE+H    K GFI D  V   LI MY+K G++  AR VF    
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW- 824
           ++ + SWN MI G A  G G EA  +F ++ + GF PD+ T+ +LL    ++G  E  W 
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE--WV 354

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
           K     + +  ++  +   S  V +  + G +D+A      +  + + T W A++G 
Sbjct: 355 KEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGG 410



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 168/374 (44%), Gaps = 17/374 (4%)

Query: 577 YVKNDCLQNAQEVFDNMKNR----NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           Y +    ++A +V+  M+      N + + S++   C        KK+   + +   + D
Sbjct: 5   YAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSD 64

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           +    +LV+ Y   G   +A +I   M    +  NV++WT +I G       +E+   F+
Sbjct: 65  VRVETALVNMYVKCGSIDDAQLIFDKM----VERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           QMQ+E   PNS T  S+L      G L+  KE+H   +  G   D  V   L+ MY+KSG
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL- 811
           ++  AR VF     + + SW  MI G A +G G+EA  LF ++   G  P+  T+ ++L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 812 -AACKNSGLVEEGW-KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +A  ++G +E  W K     +     I  +   + ++ +  K G +D+A      M  +
Sbjct: 241 ASAITSTGALE--WVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 870 PDATIWGALLGSCRIHG--HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
            D   W A++G    +G  H  +      +     P +S  Y  ++N    +  WE V+ 
Sbjct: 299 -DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVP-DSTTYLSLLNTHVSTGAWEWVKE 356

Query: 928 LRHSMDEVGVKSVL 941
           +     EVG+ S L
Sbjct: 357 VHKHAVEVGLVSDL 370



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 4/219 (1%)

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           +I G  +     +++K + QM++E  +PN  T  S+L+ C     L+ GK+IH   +++G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
           F  D  V T L++MY K G++  A+ +F K   + + SW  MI G A YG G+EA   F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEGW-KYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
           ++   GF P++ T+ ++L A  ++G +E  W K   S + +  +   +   + +V +  K
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALE--WVKEVHSHAVNAGLALDLRVGNALVHMYAK 178

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           +G +D+A      M  + D   W  ++G    HG  + A
Sbjct: 179 SGSIDDARVVFDGM-VERDIFSWTVMIGGLAQHGRGQEA 216



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 188/464 (40%), Gaps = 56/464 (12%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           VK  H   +++G +  SD  V S   H Y+  G    A   F     R+   W++ +   
Sbjct: 354 VKEVHKHAVEVGLV--SDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMI--- 408

Query: 269 ESFGGEVQ-----ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
              GG  Q     E L ++ ++  +G    +     IL       A     EVH+  I  
Sbjct: 409 ---GGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDA 465

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G   D+ +  AL++ Y KC +   A ++F ++ +  +   W  +I    ++     A  L
Sbjct: 466 GL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVE-RNVTTWTVMISGLAQHGCGHEAFSL 523

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F +M        + T V +L ACA  GA    K++H + + + L S+L V N L+ MY++
Sbjct: 524 FLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAK 583

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              ++ A RVFD M + ++ SW  MI                                  
Sbjct: 584 CGSVDDARRVFDDMLERDVYSWTVMI---------------------------------- 609

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN-G 562
             G   HG   + L L   M+  GF+PNG S   VL A +   L+  GR     + ++ G
Sbjct: 610 -GGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYG 668

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKML 621
           ++  +   T ++D+  +   L+ A+    NM        W +L+      G    A+   
Sbjct: 669 IEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAE--F 726

Query: 622 NQMEEEEIKPDLVSWNSLVSG-YSIWGQSKEALVIIHHMKNSGI 664
              E  ++KP   S   L+S  Y+  G  ++ L++   M+  GI
Sbjct: 727 AAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGI 770



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 145/338 (42%), Gaps = 15/338 (4%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L  VK  H+  I  G +   D  V + + H Y + G+   A + F     R+   W+  +
Sbjct: 452 LEWVKEVHSYAIDAGLV---DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMI 508

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
                 G    E   ++ ++  +G++  +     IL  C    A     EVH+  +  G 
Sbjct: 509 SGLAQHGCG-HEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGL 567

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLF 384
             D+ +  AL++ Y KC  V+ A ++F ++  LE D+  W  +I    ++ +  +A+ LF
Sbjct: 568 VSDLRVGNALVHMYAKCGSVDDARRVFDDM--LERDVYSWTVMIGGLAQHGRGLDALDLF 625

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSR 443
            +M+    K    + V +L AC+  G   EG +Q         +E  +    C++ +  R
Sbjct: 626 VKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGR 685

Query: 444 NNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
             +LE A     +M  +   + W +++ +    G +++A   F      +++P   +   
Sbjct: 686 AGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMA--EFAAKERLKLKPKSASTYV 743

Query: 503 LLSGHFTH-GSYQNVLTLLRGMQSLGFR--PNGSSVSV 537
           LLS  +   G+++  L +   MQ  G R  P  S + V
Sbjct: 744 LLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEV 781


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 858

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 290/895 (32%), Positives = 467/895 (52%), Gaps = 73/895 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            HA +IK G  ++ D  +++ L+  Y +   F  A K            WSS L  Y    
Sbjct: 4    HAHLIKFG--FSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQ-N 60

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G V+E L V+ E+   GV         +LK C+      +G +VH   +  GF+ D  + 
Sbjct: 61   GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
              L+  Y KC  ++ + +LF  + +  + + WN +    +++E    A+ LF+EM  S  
Sbjct: 121  NTLVVMYAKCGLLDDSRRLFGGIVE-RNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                 +I  +L ACA +     G++IHG +LK  L+ +    N L+ MYS+  ++E A  
Sbjct: 180  MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            VF                        D+A             PD+++WN +++G   H  
Sbjct: 240  VFQ-----------------------DIA------------HPDVVSWNAIIAGCVLHDC 264

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                L LL  M+  G RPN  ++S  L+A   +   + GR+ H  +++     DL+    
Sbjct: 265  NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG 324

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+DMY K + + +A+  +D+M  ++I+AWN+LISGY   G  ++A  + ++M  E+I  +
Sbjct: 325  LVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFN 384

Query: 633  LVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPN------------------------ 667
              + ++++   +   Q+ +    IH +   SGIY +                        
Sbjct: 385  QTTLSTVLKSVASL-QAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF 443

Query: 668  -------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                   +V +TS+I+   Q  +  E+LK ++QMQ  DIKP+    SSLL  C  L   +
Sbjct: 444  EERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYE 503

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             GK++H   +K GF+ D + +  L++MY+K G+++ A   F +  N+ + SW+ MI G+A
Sbjct: 504  QGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYA 563

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
             +G+GKEA+ LF+++L  G  P+ IT  ++L AC ++GLV EG +YF+ M   + I PT 
Sbjct: 564  QHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQ 623

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            EHY+CM+DLLG++G L+EA + + ++PF+ D  +WGALLG+ RIH ++E  + A++ LF 
Sbjct: 624  EHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFD 683

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            LEP  S  + L+ N+ A +  WE+V ++R  M +  VK     SWI+I   V+ F     
Sbjct: 684  LEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDR 743

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             H  + EIY +L  L   + K GY         ++D+ EK K+L  H+EKLA+ +GL+ T
Sbjct: 744  SHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIAT 803

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                PIRV KN R+C DCHT  K++  +  REI +RD  RFHHF++G CSC D W
Sbjct: 804  PPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/605 (26%), Positives = 288/605 (47%), Gaps = 69/605 (11%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           +E+HA LIK GF  D  L+  L+  Y KCR    A KL  E S+L D + W+ ++   ++
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSEL-DVVSWSSLLSGYVQ 59

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N   E A+ +F EM     K    T   +L+AC+     + G+++HG  + +  ES+  V
Sbjct: 60  NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N L+ MY++   L+ + R+F  + + N+ SWN++ S Y        A  LF +M  S  
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRS-- 177

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
                                            G  PN  S+S++L A   L+    GR+
Sbjct: 178 ---------------------------------GIMPNEFSISIILNACAGLQEGDLGRK 204

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG +L+ GLD D +   +L+DMY K   ++ A  VF ++ + ++V+WN++I+G      
Sbjct: 205 IHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDC 264

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG------QSKEALVII----------- 656
              A  +L++M+    +P++ + +S +   +  G      Q   +L+ +           
Sbjct: 265 NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG 324

Query: 657 --------------HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                             +S    +++ W +LISG  Q  ++ +++  F +M  EDI  N
Sbjct: 325 LVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFN 384

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
            TT+S++L++   L  ++  K+IH + +K+G   D YV   L+D Y K  ++  A ++F 
Sbjct: 385 QTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFE 444

Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
           +   + L ++  MI  ++ YG+G+EA+ L+ ++ +   +PD    ++LL AC N    E+
Sbjct: 445 ERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQ 504

Query: 823 GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
           G K     +  +  +  I   + +V++  K G +++A      +P +   + W A++G  
Sbjct: 505 G-KQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVS-WSAMIGGY 562

Query: 883 RIHGH 887
             HGH
Sbjct: 563 AQHGH 567



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           E+H   +K GF +D  +   L+ +YSK      AR++  +S+   + SW+ ++ G+   G
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACK-----NSGLVEEGWKYFDSMSTDYNIIP 838
             +EA+L+F+E+   G + +  TF ++L AC      N G    G        +D  +  
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
           T      +V +  K G LD++      +  + +   W AL  SC +   L
Sbjct: 122 T------LVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALF-SCYVQSEL 163


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/676 (38%), Positives = 392/676 (57%), Gaps = 42/676 (6%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            + +L+AC +  +  E K+IH + LK+   ++ SV + L  +Y   N++ LA R+FD + +
Sbjct: 12   LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             ++  WN +I +Y                           WN         G +   + L
Sbjct: 72   PSVILWNQIIRAY--------------------------AWN---------GPFDGAIDL 96

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
               M  LG RPN  +   VL+A + L  ++ G E H +    GL+ D++V T+L+D Y K
Sbjct: 97   YHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAK 156

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
               L  AQ +F +M +R++VAWN++I+G    GL  +A +++ QM+EE I P+    +S 
Sbjct: 157  CGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN----SST 212

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            + G      + + L+    + +     N V+W+++I G + ++  +E+L  F  MQ   I
Sbjct: 213  IVGVL---PTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGI 269

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
             P+ TTM  +L  C  L  LQ+G   H   +  GF  D  +   LIDMYSK G +  ARE
Sbjct: 270  DPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFARE 329

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF +     + SWN MI+G+ I+G G EA+ LFH+LL  G +PD ITF  LL++C +SGL
Sbjct: 330  VFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGL 389

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            V EG  +FD+MS D++I+P +EH  CMVD+LG+AG +DEA  FIR MPF+PD  IW ALL
Sbjct: 390  VMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALL 449

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             +CRIH ++E  E  S+++  L P ++ N+ L+ N+ + + RW+D   +R +  + G+K 
Sbjct: 450  SACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKK 509

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
            +   SWI+I+ IVH F      H    +I  +L  L+ EMK+LGY  +   V+QD++EEE
Sbjct: 510  IPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEE 569

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K ++LL H+EKLAI +G++  K+  PI V KN RVC DCHTA K+M+L+  REI +RD  
Sbjct: 570  KEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDAN 629

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF+ G C+C D W
Sbjct: 630  RFHHFKNGTCNCGDFW 645



 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 206/455 (45%), Gaps = 33/455 (7%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C +  +     ++H   +K   + D  +   L   Y  C  V  A +LF E+ +  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN-P 72

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
             +LWN+II     N  ++ AI L+  M     +    T   +L+AC+ + A  +G +IH
Sbjct: 73  SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            +     LES++ VC  L+  Y++   L  A R+F SM   ++ +WN+MI+  +  G  D
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192

Query: 480 VAWSLFNKMNSSRIQPDI----------------------------ITWNCLLSGHFTHG 511
            A  L  +M    I P+                             ++W+ ++ G+    
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASD 252

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
             +  L + R MQ  G  P+ +++  VL A + L  L++G  SHGY++  G   D  +  
Sbjct: 253 CMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 312

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DMY K   +  A+EVF+ M   +IV+WN++I GY   GL + A  + + +    +KP
Sbjct: 313 ALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKP 372

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
           D +++  L+S  S  G   E  +    M ++  I P +     ++    +     E+  F
Sbjct: 373 DDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF 432

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
              M  E   P+    S+LL  C     ++ G+E+
Sbjct: 433 IRNMPFE---PDVRIWSALLSACRIHKNIELGEEV 464



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 117/291 (40%), Gaps = 37/291 (12%)

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           A K F +   R+   WS+ +  Y +    ++E L+++  +   G+      +  +L  C+
Sbjct: 226 ARKIFDVMGVRNEVSWSAMIGGYVA-SDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACS 284

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
            L A   G   H  LI RGF  D  +  AL++ Y KC  +  A ++F+ + D  D + WN
Sbjct: 285 HLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRM-DRHDIVSWN 343

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I+    +     A+ LF ++     K    T + +L +C+  G   EG+     + + 
Sbjct: 344 AMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRD 403

Query: 426 -ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
            ++   +  C C++ +  R                                G +D A   
Sbjct: 404 FSIVPRMEHCICMVDILGRA-------------------------------GLIDEAHHF 432

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
              M     +PD+  W+ LLS    H + +    + + +QSLG    G+ V
Sbjct: 433 IRNMP---FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFV 480


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 294/902 (32%), Positives = 452/902 (50%), Gaps = 80/902 (8%)

Query: 211  KSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
            K  HA +I+ G  + SD  V++ L+  Y++ G    A   F     R+   W+  +    
Sbjct: 239  KKIHAHIIQSG--FQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLA 296

Query: 270  SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
             +G   QE   ++ ++  +G I  S     IL       A     EVH+  +  G   D+
Sbjct: 297  HYG-RGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDL 355

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
             +  AL++ Y K   ++ A  +F  +++  D   W  +I    ++ + + A  LF +MQ 
Sbjct: 356  RVGNALVHMYAKSGSIDDARVVFDGMTE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQR 414

Query: 390  SSAKAISRTIVKMLQACA--KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
            +       T + +L A A     A    K +H +  ++   S+L + N LI MY++    
Sbjct: 415  NGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAK---- 470

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
                                        G +D A  +F+ M       D+I+WN ++ G 
Sbjct: 471  ---------------------------CGSIDDARLVFDGM----CDRDVISWNAMMGGL 499

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              +G      T+   MQ  G  P+ ++   +L        L++  E H + +  GL  D 
Sbjct: 500  AQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDF 559

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
             VG++ + MY++   + +A+ +FD +  R++  WN++I G   +     A  +  QM+ E
Sbjct: 560  RVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQRE 619

Query: 628  EIKPDLVSW----------------------------------NSLVSGYSIWGQSKEAL 653
               PD  ++                                  N+LV  YS  G  K A 
Sbjct: 620  GFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAK 679

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +   M    +  NV TWT +I G  Q+    ++   F+QM +E I P++TT  S+L  C
Sbjct: 680  QVFDDM----VERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSAC 735

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
               G L+  KE+H   +  G + D  V   L+ MY+K G++  AR VF     + + SW 
Sbjct: 736  ASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWT 795

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             MI G A +G G EA+  F ++   GF+P+  ++ A+L AC ++GLV+EG + F SM+ D
Sbjct: 796  VMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQD 855

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            Y I PT+EHY+CMVDLLG+AG L+EA  FI  MP +PD   WGALLG+C  +G+LE AE 
Sbjct: 856  YGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEF 915

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A++   KL+P +++ Y L+ N+ A + +WE    +R  M   G++     SWI++D  +H
Sbjct: 916  AAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIH 975

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             F      HP + EIY +L  L+  +K  GYVPDTR V ++ D+E K + L SH+EKLAI
Sbjct: 976  SFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAI 1035

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            VYGLM T+S+ PIRV KN RVCSDCHTA K++S + GREI  RD  RFHHF++G CSC D
Sbjct: 1036 VYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGD 1095

Query: 1074 CW 1075
             W
Sbjct: 1096 YW 1097



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 164/634 (25%), Positives = 293/634 (46%), Gaps = 76/634 (11%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +G+   S     IL+ C K     L  +VH  +IK G + ++++   L+  Y +C  ++ 
Sbjct: 112 QGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQC 171

Query: 348 ANKLFSEVSDLEDDL-LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
           A ++F ++  L+ ++ +W  +I         E+A++++ +M+    +    T + +L+AC
Sbjct: 172 ARQVFDKL--LKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKAC 229

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
                   GK+IH ++++S  +S++ V   L++MY +                       
Sbjct: 230 CCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVK----------------------- 266

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
                    G ++ A  +F+KM    ++ ++I+W  ++ G   +G  Q    L   MQ  
Sbjct: 267 --------CGSIEDAQLIFDKM----VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQRE 314

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
           GF PN  +   +L A      L++ +E H + +  GL  DL VG +L+ MY K+  + +A
Sbjct: 315 GFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDA 374

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           + VFD M  R+I +W  +I G    G    A  +  QM+     P+L ++ S+++  +I 
Sbjct: 375 RVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIA 434

Query: 647 GQSK-EALVIIH-HMKNSGIYPN-------------------------------VVTWTS 673
             S  E + ++H H + +G   +                               V++W +
Sbjct: 435 STSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNA 494

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           ++ G  QN    E+   F+QMQQE + P+STT  SLL T G    L+   E+H   ++ G
Sbjct: 495 MMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG 554

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            I D  V +  I MY + G++  AR +F K + + + +WN MI G A    G+EA+ LF 
Sbjct: 555 LISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFL 614

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEGW-KYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
           ++   GF PDA TF  +L+A  +   +E  W K   S +TD  ++  +   + +V    K
Sbjct: 615 QMQREGFIPDATTFINILSANVDEEALE--WVKEVHSHATDAGLVD-LRVGNALVHTYSK 671

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            G +  A      M  + + T W  ++G    HG
Sbjct: 672 CGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQHG 704



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 135/564 (23%), Positives = 240/564 (42%), Gaps = 69/564 (12%)

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            ++ + +L+     G   +  S   +LQ   +   +   ++ H  I+++G++ +LYV   L
Sbjct: 100  KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            + +Y++   LQ A++VFD +  +NI  W ++I GY   G   +A ++ ++M +E  +P+ 
Sbjct: 160  LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219

Query: 634  VSW-----------------------------------NSLVSGYSIWGQSKEALVIIHH 658
            +++                                    +LV+ Y   G  ++A +I   
Sbjct: 220  ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            M    +  NV++WT +I G       +E+   F+QMQ+E   PNS T  S+L      G 
Sbjct: 280  M----VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGA 335

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            L+  KE+H   +  G   D  V   L+ MY+KSG++  AR VF     + + SW  MI G
Sbjct: 336  LEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGG 395

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW-KYFDSMSTDYNII 837
             A +G G+EA  LF ++   G  P+  T+ ++L A   +      W K     + +   I
Sbjct: 396  LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFI 455

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH--GHLEYAEIAS 895
              +   + ++ +  K G +D+A      M  + D   W A++G    +  GH  +     
Sbjct: 456  SDLRIGNALIHMYAKCGSIDDARLVFDGMCDR-DVISWNAMMGGLAQNGCGHEAFTVFLQ 514

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG------VKSVLVWSWIQ-- 947
             +   L P +S  Y  ++N    ++  E V  +     E G      V S  +  +I+  
Sbjct: 515  MQQEGLVP-DSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCG 573

Query: 948  -IDQIVHVFSAEGAPHPATGEIYF----------ELYHLVSEMKKLGYVPDT----RCVY 992
             ID    +F      H  T               E   L  +M++ G++PD       + 
Sbjct: 574  SIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILS 633

Query: 993  QDIDEE--EKGKVLLSHTEKLAIV 1014
             ++DEE  E  K + SH     +V
Sbjct: 634  ANVDEEALEWVKEVHSHATDAGLV 657



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 189/477 (39%), Gaps = 56/477 (11%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFS 255
            LN       L  V   H   ++ G I  SD  V S   H Y+  G    A   F     
Sbjct: 530 LLNTHGSTDALEWVNEVHKHAVETGLI--SDFRVGSAFIHMYIRCGSIDDARLLFDKLSV 587

Query: 256 RSYADWSSFLEDYESFGGEVQ-----ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAF 310
           R    W++ +      GG  Q     E L ++ ++  +G I  +     IL       A 
Sbjct: 588 RHVTTWNAMI------GGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEAL 641

Query: 311 WLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
               EVH+     G   D+ +  AL++ Y KC +V+ A ++F ++ +  +   W  +I  
Sbjct: 642 EWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVE-RNVTTWTMMIGG 699

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             ++    +A   F +M        + T V +L ACA  GA    K++H + + + L S+
Sbjct: 700 LAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSD 759

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           L V N L+ MY++   ++ A  VFD M + ++ SW  MI      G    A   F KM S
Sbjct: 760 LRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKS 819

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                                               GF+PNG S   VL A +   L+  
Sbjct: 820 E-----------------------------------GFKPNGYSYVAVLTACSHAGLVDE 844

Query: 551 GRESHGYILRN-GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGY 608
           GR     + ++ G++  +   T ++D+  +   L+ A+    NM    +   W +L+   
Sbjct: 845 GRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGAC 904

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-YSIWGQSKEALVIIHHMKNSGI 664
              G    A+      E  ++KP   S   L+S  Y+  G+ ++ L++   M+  GI
Sbjct: 905 VTYGNLEMAE--FAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGI 959


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 304/949 (32%), Positives = 464/949 (48%), Gaps = 94/949 (9%)

Query: 168  TNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD 227
              S    A PPTD       L  +             R +S  +  HA  +  G + + D
Sbjct: 44   ARSARGRAPPPTDHYGWVLDLVAVR------------RAVSEGRQLHAHAVATGALGDDD 91

Query: 228  D--MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL 285
               +   L+F Y + G    A + F    +R+   W++ +    S GG   E + V+  +
Sbjct: 92   AGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGG-AGEAVGVYRAM 150

Query: 286  HGK----GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
                   G       L  +LK C        G EVH   +K G D    +  AL+  Y K
Sbjct: 151  RASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAK 210

Query: 342  CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
            C  ++SA ++F  + D  D   WN  I   ++N  +  A+ LFR MQ       S T V 
Sbjct: 211  CGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVG 270

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +LQ CA++   + G+++H  +LK   E N+  CN L+ MY+R                  
Sbjct: 271  VLQVCAELAQLNHGRELHAALLKCGTEFNIQ-CNALLVMYAR------------------ 311

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                          G+VD A  +F ++       D I+WN +LS +  +  Y   +    
Sbjct: 312  -------------CGWVDSALRVFREIGDK----DYISWNSMLSCYVQNRLYAEAIDFFG 354

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M   GF P+ + +  +L AV  L  L  GRE H Y ++  LD DL +  +LMDMY+K  
Sbjct: 355  EMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCY 414

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             ++ +  VFD M+ ++ V+W ++I+ Y     +  A       ++E IK D +   S++ 
Sbjct: 415  SVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILE 474

Query: 642  GYS-------------------------------IWGQSKE---ALVIIHHMKNSGIYPN 667
              S                               I+G+  E   AL I   +       +
Sbjct: 475  ACSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKK----D 530

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +VTWTS+++   +N    E++  F +M    I+P+S  +  +L    GL  L  GKEIH 
Sbjct: 531  IVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHG 590

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              ++  F  +  V + L+DMYS  G++  A +VF ++  K +  W  MI    ++G+GK+
Sbjct: 591  FLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQ 650

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            AI +F  +LETG  PD ++F ALL AC +S LV+EG  Y D M + Y + P  EHY+C+V
Sbjct: 651  AIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVV 710

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG++G  +EA+ FI++MP +P + +W ALLG+CRIH + E A IA+ +L +LEP N  
Sbjct: 711  DLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPG 770

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            NY L+ N+ A   +W +V+ +R  M E G++     SWI+I   VH F+A    H  +  
Sbjct: 771  NYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQA 830

Query: 968  IYFELYHLVSEMKKLG-YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
            I+ +L  +  ++++ G YV DT  V  D+ EEEK  +L  H+E+LAI +GL+ T S  P+
Sbjct: 831  IHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPL 890

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+ KN RVC DCH   K +S +  REI +RD  RFHHF  G CSC D W
Sbjct: 891  RIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 297/914 (32%), Positives = 466/914 (50%), Gaps = 110/914 (12%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG---ELHGK 288
            +L+  Y  FG    A  +       S   W++ +  Y     ++    E WG    +   
Sbjct: 215  ALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYV----KILSWEEAWGIFDRMLKI 270

Query: 289  GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            GV   +      L++C  L +   G +VH+ LI  GF  D  +  AL++ Y KC D ES 
Sbjct: 271  GVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESC 330

Query: 349  NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             K+F E+ +  + + WN II  + +   + +A+ LF  MQ S  K+    +  +L A A 
Sbjct: 331  LKVFDEMGE-RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAG 389

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
            +    +G+++HG+++++ L S++ + + L+ MYS+   +E A +VF S+ + N  S+N++
Sbjct: 390  LADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNAL 449

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSR-IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            ++ Y   G  + A  L++ M S   IQPD  T+  LL+                      
Sbjct: 450  LAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT---------------------- 487

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
                              R    GR+ H +++R  +  ++ V T L+ MY +   L  A+
Sbjct: 488  -------------LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY---- 643
            E+F+ M  RN  +WNS+I GY   G    A ++  QM+   IKPD  S +S++S      
Sbjct: 535  EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594

Query: 644  -SIWGQSKEALVIIHHMKNSGIY--------------------------PNVVTWTSLIS 676
             S  G+     ++ + M+  GI                            +V+    ++S
Sbjct: 595  DSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVS 654

Query: 677  GSLQNENYRESLKFFIQMQQE-------------------------------DIKPNSTT 705
              + +    ++   F QM+Q                                DI+ +  T
Sbjct: 655  AFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT 714

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV-ATGLIDMYSKSGNLKSAREVFRKS 764
            M +++  C  L  L++G ++H L +K GF+  + V  T L+DMYSK G +  AR VF   
Sbjct: 715  MVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNM 774

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K + SWN MI G++ +G  KEA++L+ E+ + G  P+ +TF A+L+AC ++GLVEEG 
Sbjct: 775  NGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGL 834

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            + F SM  DYNI    EHY+CMVDLLG+AG L++A +F+  MP +P+ + WGALLG+CR+
Sbjct: 835  RIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRV 894

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H  ++   +A++RLF+L+P N   Y +M N+ A + RW++VE +R  M   GVK     S
Sbjct: 895  HKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVS 954

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ---DIDEEEKG 1001
            WI+I+  + +F A    HP T EIY  L HL  + K LGY+PDT  + Q   DI EEE+ 
Sbjct: 955  WIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEE 1014

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            + LL H+E+LA+  GL+    ++ IRV KN R+C DCHTA K++S + GR I  RD  RF
Sbjct: 1015 EYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRF 1074

Query: 1062 HHFREGECSCNDCW 1075
            HHF  G+CSC D W
Sbjct: 1075 HHFENGKCSCGDYW 1088



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 274/604 (45%), Gaps = 88/604 (14%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC---RDVESANKLFSEVS 356
           +++ C    +F  G  +H  +I  G++ D +L   ++  Y +     D+  A KLF E+ 
Sbjct: 77  LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  +   WN +I+   R + +   ++L+  M+ S   +   T   +++AC  +      +
Sbjct: 137 E-RNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVR 195

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+   V+K+ L  NL V   L+  Y+R   ++ A    D ++  ++ +WN++I+ Y  + 
Sbjct: 196 QLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKIL 255

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + AW +F++M    + PD          +FT  S                        
Sbjct: 256 SWEEAWGIFDRMLKIGVCPD----------NFTFAS------------------------ 281

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             L+    LR    G++ H  ++  G   D +VG +L+DMY K D  ++  +VFD M  R
Sbjct: 282 -ALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 340

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK-------------------------- 630
           N V WNS+IS     G F +A  +  +M+E   K                          
Sbjct: 341 NQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELH 400

Query: 631 ---------PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                     D++  ++LV  YS  G  +EA    H +  S +  N V++ +L++G +Q 
Sbjct: 401 GHLVRNLLNSDIILGSALVDMYSKCGMVEEA----HQVFRSLLERNEVSYNALLAGYVQE 456

Query: 682 ENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
               E+L+ +  MQ ED I+P+  T ++LL  C        G++IH   ++    K+  V
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIV 516

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            T L+ MYS+ G L  A+E+F + A +   SWN MI G+   G  +EA+ LF ++   G 
Sbjct: 517 ETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGI 576

Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS----CMVDLLGKAGYL 856
           +PD  + +++L++C +    ++G +       ++ +  T+E        +VD+  K G +
Sbjct: 577 KPDCFSLSSMLSSCVSLSDSQKGRELH-----NFIVRNTMEEEGILQVVLVDMYAKCGSM 631

Query: 857 DEAW 860
           D AW
Sbjct: 632 DYAW 635



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/611 (22%), Positives = 268/611 (43%), Gaps = 105/611 (17%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE---LATRVFDSMK 458
           ++Q C    +F  GK IH  ++ +    +  +   ++ +Y+R+  L+    A ++F+ M 
Sbjct: 77  LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
           + NL++WN+MI +Y                  +R+                   Y  VL 
Sbjct: 137 ERNLTAWNTMILAY------------------ARVD-----------------DYMEVLR 161

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           L   M+  G   +  +   V++A   +  +   R+    +++ GL+ +L+VG +L+D Y 
Sbjct: 162 LYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYA 221

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGY---------------------CFKGL-FVN 616
           +   + +A    D ++  ++V WN++I+GY                     C     F +
Sbjct: 222 RFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFAS 281

Query: 617 AKKMLNQMEEEE-------------IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           A ++   +   +              K D    N+L+  Y+     +  L +   M    
Sbjct: 282 ALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER- 340

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              N VTW S+IS   Q  ++ ++L  F++MQ+   K N   + S+L    GL  +  G+
Sbjct: 341 ---NQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGR 397

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           E+H   ++N    D  + + L+DMYSK G ++ A +VFR    +   S+N ++ G+   G
Sbjct: 398 ELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEG 457

Query: 784 NGKEAILLFHELL-ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
             +EA+ L+H++  E G QPD  TFT LL  C N     +G +   +     NI   I  
Sbjct: 458 KAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQG-RQIHAHLIRANITKNIIV 516

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK-- 900
            + +V +  + G L+ A +    M  + +A  W +++   + +G  + A     RLFK  
Sbjct: 517 ETELVHMYSECGRLNYAKEIFNRMAER-NAYSWNSMIEGYQQNGETQEA----LRLFKQM 571

Query: 901 ----LEPCNSANYNLMMNLLAMSNRWEDVER----LRHSMDEVGVKSVLV---------- 942
               ++P   +  +++ + +++S+  +  E     +R++M+E G+  V++          
Sbjct: 572 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSM 631

Query: 943 -WSWIQIDQIV 952
            ++W   DQ +
Sbjct: 632 DYAWKVYDQTI 642



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 186/394 (47%), Gaps = 44/394 (11%)

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN---AQEVFDN 592
           S ++Q   +    + G+  H  ++ NG + D Y+ T ++ +Y ++ CL +   A+++F+ 
Sbjct: 75  SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEE 134

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKM-------------------------------L 621
           M  RN+ AWN++I  Y     ++   ++                               +
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGV 194

Query: 622 NQMEEEEIKP----DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
            Q++   +K     +L    +LV GY+ +G   +A+  +  ++ +    +VVTW ++I+G
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGT----SVVTWNAVIAG 250

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
            ++  ++ E+   F +M +  + P++ T +S L+ CG L     GK++H   +  GF  D
Sbjct: 251 YVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 310

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            +V   LIDMY+K  + +S  +VF +   +   +WN +I   A +G+  +A++LF  + E
Sbjct: 311 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 370

Query: 798 TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
           +G++ +     ++L A      + +G +    +  +  +   I   S +VD+  K G ++
Sbjct: 371 SGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGMVE 429

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           EA    R++  + +   + ALL      G  E A
Sbjct: 430 EAHQVFRSL-LERNEVSYNALLAGYVQEGKAEEA 462



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 40/282 (14%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS---AR 758
           N    SSL+Q C      Q GK IH   + NG+  DAY+ T ++ +Y++SG L     AR
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN-- 816
           ++F +   + L +WN MI+ +A   +  E + L+  +  +G   D  TF +++ AC    
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189

Query: 817 -----------------------SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
                                   G + +G+  F  M      +  IE  S +      A
Sbjct: 190 DMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIA 249

Query: 854 GYL-----DEAW---DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
           GY+     +EAW   D +  +   PD   + + L   R+ G L   +   +   KL  C 
Sbjct: 250 GYVKILSWEEAWGIFDRMLKIGVCPDNFTFASAL---RVCGALRSRDGGKQVHSKLIACG 306

Query: 906 SANYNLMMN-LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
                 + N L+ M  + +D E      DE+G ++ + W+ I
Sbjct: 307 FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSI 348


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Glycine max]
          Length = 923

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 286/883 (32%), Positives = 446/883 (50%), Gaps = 76/883 (8%)

Query: 229  MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
            +   L+  Y + G    A K F     R+   W++ +  + S  G+  E +E++ ++   
Sbjct: 81   LATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVS-SGKYLEAIELYKDMRVL 139

Query: 289  GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            GV   +     +LK C  L    LG E+H   +K G+   V +  AL+  YGKC D+  A
Sbjct: 140  GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGA 199

Query: 349  NKLFSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
              LF  +  + ED + WN II   +       A+ LFR MQ     + + T V  LQ   
Sbjct: 200  RVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVE 259

Query: 408  KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
                   G  IHG VLKS   +++ V N LI+MY++  ++E A RVF+            
Sbjct: 260  DPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFE------------ 307

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
                                   S +  D ++WN LLSG   +  Y + L   R MQ+ G
Sbjct: 308  -----------------------SMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSG 344

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             +P+  SV  ++ A      L  G+E H Y +RNGLD ++ +G +L+DMY K  C++   
Sbjct: 345  QKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMG 404

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN--QMEEEEIKP-------------- 631
              F+ M  +++++W ++I+GY      + A  +    Q++  ++ P              
Sbjct: 405  HAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLK 464

Query: 632  ------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                              D++  N++V+ Y   G    A      +++     ++V+WTS
Sbjct: 465  SRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSK----DIVSWTS 520

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I+  + N    E+L+ F  ++Q +I+P+S  + S L     L  L+ GKEIH   ++ G
Sbjct: 521  MITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKG 580

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            F  +  +A+ L+DMY+  G ++++R++F     + L  W  MI    ++G G +AI LF 
Sbjct: 581  FFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFK 640

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            ++ +    PD ITF ALL AC +SGL+ EG ++F+ M   Y + P  EHY+CMVDLL ++
Sbjct: 641  KMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRS 700

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
              L+EA+ F+R MP KP + IW ALLG+C IH + E  E+A++ L + +  NS  Y L+ 
Sbjct: 701  NSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALIS 760

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A   RW DVE +R  M   G+K     SWI++D  +H F A    HP T +IY +L 
Sbjct: 761  NIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLA 820

Query: 974  HLVSEM-KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
                 + KK GY+  T+ V+ ++ EEEK ++L  H+E+LA+ YGL+ T     IR+ KN 
Sbjct: 821  QFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNL 880

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCHT  K  S V  R + +RD  RFHHF  G CSC D W
Sbjct: 881  RICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 835

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 278/870 (31%), Positives = 447/870 (51%), Gaps = 67/870 (7%)

Query: 237  YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
            Y + G    A   F     RS   W++ +  Y S  GE    LE++ E+   GV F S  
Sbjct: 2    YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVS-NGEALGALEMYREMRHLGVSFDSYT 60

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              ++LK C  +   + G E+H   IK G D  V +  +L+  Y KC D+  A KLF  + 
Sbjct: 61   FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
               D + WN II     N     A+ LF EM  +     + T    LQAC        G 
Sbjct: 121  VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            QIH  +LKS    ++ V N L++MY R  K+  A  +F +++  ++ +WNSM++ +   G
Sbjct: 181  QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                A   F  + ++ ++PD ++                +++++     LG+  N     
Sbjct: 241  LYSEALEFFYDLQNADLKPDQVS----------------IISIIVASGRLGYLLN----- 279

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
                          G+E H Y ++NG D ++ VG +L+DMY K  C+      FD M ++
Sbjct: 280  --------------GKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHK 325

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------VS 641
            ++++W +  +GY     ++ A ++L Q++ E +  D     S+               + 
Sbjct: 326  DLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIH 385

Query: 642  GYSIWGQSKEALV---IIHHMKNSGIY------------PNVVTWTSLISGSLQNENYRE 686
            GY+I G   + ++   II      GI              +VV+WTS+IS  + N    +
Sbjct: 386  GYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANK 445

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +L+ F  M++  ++P+  T+ S+L     L  L+ GKEIH   ++ GFI +  ++  L+D
Sbjct: 446  ALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVD 505

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY++ G+++ A ++F  + N+ L  W  MI  + ++G G+ A+ LF  + +    PD IT
Sbjct: 506  MYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHIT 565

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F ALL AC +SGLV EG  + + M  +Y + P  EHY+C+VDLLG+   L+EA+  +++M
Sbjct: 566  FLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSM 625

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              +P   +W ALLG+CRIH + E  E+A+ +L +L+  N  NY L+ N+ A + RW+DVE
Sbjct: 626  QNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVE 685

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL-GYV 985
             +R  M   G+      SWI++   +H F +    HP   +IY +L  +  ++K+  GYV
Sbjct: 686  EVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYV 745

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
              T+ V  ++ EEEK ++L  H+E+LAI YGL+ T    PIRV KN RVC DCH+    +
Sbjct: 746  AQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLV 805

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S    RE+ +RD +RFHHF++G CSC D W
Sbjct: 806  SRFFERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 228/501 (45%), Gaps = 43/501 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA ++K G++ +   +  +L+  Y+ FG    AA  F     +    W+S L  +    G
Sbjct: 183 HAAILKSGRVLDVY-VANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ-NG 240

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              E LE + +L    +      +  I+    +L     G E+HA  IK GFD ++ +  
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            L++ Y KC  +    + F  ++  +D + W        +N+ +  A++L R++Q     
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAH-KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             +  I  +L AC  +    + K+IHGY ++  L S+  + N +I +Y     ++ A R+
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRI 418

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F+S++  ++ SW SMIS Y   G  + A  +F+ M  + ++PD +T   L+S        
Sbjct: 419 FESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVT---LVS-------- 467

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
                                   +L AV  L  LK G+E HG+I+R G   +  +  +L
Sbjct: 468 ------------------------ILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTL 503

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           +DMY +   +++A ++F   KNRN++ W ++IS Y   G    A ++  +M++E+I PD 
Sbjct: 504 VDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDH 563

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           +++ +L+   S  G   E    +  MK    + P    +T L+    +     E+ +   
Sbjct: 564 ITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVK 623

Query: 693 QMQQEDIKPNSTTMSSLLQTC 713
            MQ E   P      +LL  C
Sbjct: 624 SMQNE---PTPEVWCALLGAC 641



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 159/376 (42%), Gaps = 71/376 (18%)

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           MY K   + +A+ +FD M  R+I  WN+++ GY   G  + A +M  +M    +  D  +
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 636 W-----------------------------------NSLVSGYSIWGQSKEALVIIHHMK 660
           +                                   NSLV+ Y+       A  +   M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
              +  +VV+W S+IS    N    E+L  F +M +  +  N+ T ++ LQ C     ++
Sbjct: 121 ---VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIK 177

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
            G +IH   LK+G + D YVA  L+ MY + G +  A  +F     K + +WN M+ GF 
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFI 237

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK---YFDSMSTDYNII 837
             G   EA+  F++L     +PD ++  +++ A    G +  G +   Y      D NI+
Sbjct: 238 QNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNIL 297

Query: 838 ---PTIEHYS---CM------VDLL----------GKAGYLD-----EAWDFIRTMPFKP 870
                I+ Y+   CM       DL+            AGY       +A + +R +  + 
Sbjct: 298 VGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEG 357

Query: 871 ---DATIWGALLGSCR 883
              DAT+ G++L +CR
Sbjct: 358 MDVDATMIGSILLACR 373


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/817 (31%), Positives = 429/817 (52%), Gaps = 75/817 (9%)

Query: 294  SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
            SR    + + CT+L    LG +V   +I+ G   +++    L+  Y  C +V  A ++F 
Sbjct: 57   SRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFD 116

Query: 354  EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
             V + +  + WN +I    +    + A  LFR+M     +    T + +L AC+     +
Sbjct: 117  SVEN-KTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
             GK++H  V+ +   S+  +   L+SMY +   ++ A +VFD +   ++S          
Sbjct: 176  WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVS---------- 225

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                                     T+N ++ G+   G ++    L   MQ +G +PN  
Sbjct: 226  -------------------------TFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKI 260

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            S   +L        L +G+  H   +  GL  D+ V TSL+ MY     ++ A+ VFDNM
Sbjct: 261  SFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNM 320

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------------- 636
            K R++V+W  +I GY   G   +A  +   M+EE I+PD +++                 
Sbjct: 321  KVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAR 380

Query: 637  ------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                               +LV  Y+  G  K+A  +   M       +VV+W+++I   
Sbjct: 381  EIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRR----DVVSWSAMIGAY 436

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            ++N    E+ + F  M++ +I+P+  T  +LL  CG LG L  G EI+   +K   +   
Sbjct: 437  VENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHV 496

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
             +   LI M +K G+++ AR +F     + + +WN MI G++++GN +EA+ LF  +L+ 
Sbjct: 497  PLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKE 556

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
             F+P+++TF  +L+AC  +G V+EG ++F  +     I+PT++ Y CMVDLLG+AG LDE
Sbjct: 557  RFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDE 616

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A   I++MP KP ++IW +LL +CRIHG+L+ AE A+ R   ++P + A Y  + ++ A 
Sbjct: 617  AELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAA 676

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
            +  WE+V ++R  M+  G++     +WI++   VH F  E   HP  GEIY EL  L++ 
Sbjct: 677  AGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNA 736

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            +K+ GY+P T+ V  D+ E++K + +  H+EKLAI YG++   S  PIR+ KN RVCSDC
Sbjct: 737  IKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDC 796

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H+A+K++S V GREI  RD +RFHHF++G CSC D W
Sbjct: 797  HSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 141/297 (47%), Gaps = 7/297 (2%)

Query: 211 KSKHAQMIKMGKIWNSDDM--VKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           K+ HAQ +  G +   DD+    SLI  Y   G    A + F     R    W+  +E Y
Sbjct: 279 KAVHAQCMNAGLV---DDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGY 335

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
               G +++   ++  +  +G+         I+  C          E+H+ +   GF  D
Sbjct: 336 AE-NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTD 394

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           + +  AL++ Y KC  ++ A ++F  +    D + W+ +I   + N     A + F  M+
Sbjct: 395 LLVSTALVHMYAKCGAIKDARQVFDAMPR-RDVVSWSAMIGAYVENGYGTEAFETFHLMK 453

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            S+ +    T + +L AC  +GA   G +I+   +K+ L S++ + N LI M +++  +E
Sbjct: 454 RSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVE 513

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            A  +FD+M   ++ +WN+MI  Y+  G    A  LF++M   R +P+ +T+  +LS
Sbjct: 514 RARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLS 570



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 38/238 (15%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +S T   L Q C  L     GK++    ++ G   + Y    LI +YS  GN+  AR++F
Sbjct: 56  DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
               NKT+ +WN +I G+A  G+ KEA  LF ++++ G +P  ITF ++L AC +   + 
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            G K   +       +      + +V +  K G +D+A                      
Sbjct: 176 WG-KEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDA---------------------- 212

Query: 882 CRIHGHLEYAEIASRRLFK-LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
                         R++F  L   + + +N+M+   A S  WE    L + M +VG+K
Sbjct: 213 --------------RQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLK 256


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 296/947 (31%), Positives = 473/947 (49%), Gaps = 68/947 (7%)

Query: 161  SHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKM 220
            SH+P S+  +  SL    TD L    +     +    L      + L   +  HA  +K 
Sbjct: 16   SHRPISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKT 75

Query: 221  GKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLE 280
                +S  +    +  Y + G F  A K F     R+   W++ +    S G  V E +E
Sbjct: 76   QNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYV-EAIE 134

Query: 281  VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
            ++ E+   GV   +     +LK C       LG E+H   +K G+   V +  AL+  Y 
Sbjct: 135  LYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYA 194

Query: 341  KCRDVESANKLF-SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
            KC D+  A  LF S + + +D + WN II   +   +   A+ LFR MQ    ++ + T 
Sbjct: 195  KCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTF 254

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            V  LQAC        G+ IH  +LKS   +++ V N LI+MY+   ++E A RVF SM  
Sbjct: 255  VSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLF 314

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             +  SWN+++S                      +Q D+               Y + +  
Sbjct: 315  KDCVSWNTLLSGM--------------------VQNDM---------------YSDAINH 339

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             + MQ  G +P+  SV  ++ A      L  G E H Y +++G+D ++++G SL+DMY K
Sbjct: 340  FQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGK 399

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
              C++     F+ M  +++++W ++I+GY      ++A  +L +++ E++  D +   S+
Sbjct: 400  CCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSI 459

Query: 640  ---------------VSGYSIWGQSKEALV---------------IIHHMKNSGIYPNVV 669
                           + GY + G   + L+                  H+  S    ++V
Sbjct: 460  LLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIV 519

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +WTS+I+  + N    E+L+ F  + + +I+P+  T+ S+L     L  L+ GKEIH   
Sbjct: 520  SWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFL 579

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            ++ GF  +  +A  L+DMY++ G +++AR +F     + L  W  MI    ++G GK+AI
Sbjct: 580  IRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAI 639

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             LF ++ +    PD ITF ALL AC +SGLV EG ++F+ M  +Y + P  EHY+C+VDL
Sbjct: 640  DLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDL 699

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L ++  L+EA+ F+R MP +P A +W ALLG+CRIH + +  E+A+++L +L   NS NY
Sbjct: 700  LARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNY 759

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N  A   RW DVE +R  M    +K     SWI+++  +H F A    HP    IY
Sbjct: 760  VLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIY 819

Query: 970  FELYHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
             +L      +K K GY   T+ V+ D+ EEEK ++L  H+E+LA+ YGL+ T     +R+
Sbjct: 820  LKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRI 879

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KN R+C DCH   K  S +  R + +RD +RFHHF  G CSC D W
Sbjct: 880  TKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  488 bits (1255), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 310/990 (31%), Positives = 500/990 (50%), Gaps = 83/990 (8%)

Query: 128  SQLTRQNTAIVMPKLHSIYHHFNTRTSINQN--RHSHKPNSITNSPTSLALPPTDTLAKQ 185
            S +    +AI  P++  ++    T  S  +N  R S++P  +  SP         T A Q
Sbjct: 12   SNMMYSASAISFPRVR-LHCSIPTEPSCRRNPFRQSNQPVQVP-SPKLACFDGVLTEAFQ 69

Query: 186  ----AQLSCISSGFCFLNE-TNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEF 240
                ++ +     F ++ E   K R +S  +  H+++ K    +  D +   L+F Y + 
Sbjct: 70   RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129

Query: 241  GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
            G    A K F     R+   W++ +  Y S  GE    L ++  +  +GV         +
Sbjct: 130  GSLDDAEKVFDEMPDRTAFAWNTMIGAYVS-NGEPASALALYWNMRVEGVPLGLSSFPAL 188

Query: 301  LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
            LK C KL     G E+H+ L+K G+     +  AL++ Y K  D+ +A +LF    +  D
Sbjct: 189  LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248

Query: 361  DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
             +LWN I+     + K    ++LFREM  +     S TIV  L AC        GK+IH 
Sbjct: 249  AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308

Query: 421  YVLKSALESN-LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             VLKS+  S+ L VCN LI+MY+R                                G + 
Sbjct: 309  SVLKSSTHSSELYVCNALIAMYTR-------------------------------CGKMP 337

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A  +  +MN++    D++TWN L+ G+  +  Y+  L     M + G + +  S++ ++
Sbjct: 338  QAERILRQMNNA----DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A   L  L  G E H Y++++G D +L VG +L+DMY K +        F  M +++++
Sbjct: 394  AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI--IH 657
            +W ++I+GY      V A ++   + ++ ++ D +   S++   S+    K  L++  IH
Sbjct: 454  SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL---KSMLIVKEIH 510

Query: 658  -HMKNSGIY------------------------------PNVVTWTSLISGSLQNENYRE 686
             H+   G+                                +VV+WTS+IS S  N N  E
Sbjct: 511  CHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +++ F +M +  +  +S  +  +L     L  L  G+EIHC  L+ GF  +  +A  ++D
Sbjct: 571  AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY+  G+L+SA+ VF +   K L  +  MI  + ++G GK A+ LF ++      PD I+
Sbjct: 631  MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F ALL AC ++GL++EG  +   M  +Y + P  EHY C+VD+LG+A  + EA++F++ M
Sbjct: 691  FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              +P A +W ALL +CR H   E  EIA++RL +LEP N  N  L+ N+ A   RW DVE
Sbjct: 751  KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM-KKLGYV 985
            ++R  M   G++     SWI++D  VH F+A    HP + EIY +L  +  ++ +++GYV
Sbjct: 811  KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYV 870

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
             DT+ V  ++DE EK ++L  H+E++AI YGL++T  RA +R+ KN RVC DCHT  K +
Sbjct: 871  ADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLV 930

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S +  R+I +RD  RFHHF  G CSC D W
Sbjct: 931  SKLFRRDIVMRDANRFHHFESGLCSCGDSW 960


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein At3g03580-like
            [Vitis vinifera]
          Length = 889

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 297/937 (31%), Positives = 474/937 (50%), Gaps = 102/937 (10%)

Query: 183  AKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGD 242
            ++Q   S IS        T +   L      H+ +I +G + +S      LI  Y  F D
Sbjct: 11   SRQTLFSSISRALASAATTTQLHKL------HSLIITLG-LHHSVIFSAKLIAKYAHFRD 63

Query: 243  FTSAAKAFFLYF-SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIIL 301
             TS+   F L   S +   W+S +    +  G   E L ++ E     +   +     ++
Sbjct: 64   PTSSFSVFRLASPSNNVYLWNSIIRAL-THNGLFSEALSLYSETQRIRLQPDTYTFPSVI 122

Query: 302  KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
              C  L+ F +   +H  ++  GF  D+++  AL++ Y +  D++ A K+F E+  L D 
Sbjct: 123  NACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP-LRDV 181

Query: 362  LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
            + WN +I     N  W  A++++   +       S T+  +L+AC  +G+  EG  IHG 
Sbjct: 182  VSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGL 241

Query: 422  VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            + K  ++ ++ V N L+SMY + N L    R+FD M                        
Sbjct: 242  IEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM------------------------ 277

Query: 482  WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                       +  D ++WN ++ G+   G Y+  + L   M +  F+P+  +++ +LQA
Sbjct: 278  -----------VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQA 325

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
               L  L++G+  H Y++ +G + D      L++MY K   L  +QEVF  MK ++ V+W
Sbjct: 326  CGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 385

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------- 636
            NS+I+ Y   G F  A K+   M+ + +KPD V++                         
Sbjct: 386  NSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK 444

Query: 637  ----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                      N+LV  Y+  G+  ++L +  +MK      +++TW ++I+  + +E+   
Sbjct: 445  MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR----DIITWNTIIASCVHSEDCNL 500

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
             L+   +M+ E + P+  TM S+L  C  L   + GKEIH    K G   D  V   LI+
Sbjct: 501  GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIE 560

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MYSK G+L+++ +VF+    K + +W  +I    +YG GK+A+  F E+   G  PD + 
Sbjct: 561  MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 620

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F A++ AC +SGLVEEG  YF  M  DY I P IEHY+C+VDLL ++  LD+A DFI +M
Sbjct: 621  FVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 680

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            P KPD++IWGALL +CR+ G  E AE  S R+ +L P ++  Y L+ N+ A   +W+ V 
Sbjct: 681  PLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVR 740

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE-------- 978
             +R S+   G+K     SW++I   V+VF         TG  +FE +  V++        
Sbjct: 741  SIRKSIKARGLKKDPGCSWMEIQNKVYVF--------GTGTKFFEQFEEVNKLLGMLAGL 792

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            M K GY+ + + V  DIDE+EK  +L  H+E+LAI +GL+ TK   P++V+KN RVC DC
Sbjct: 793  MAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDC 852

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            HT  KY+S +  RE+ +RD  RFH F++G CSC D W
Sbjct: 853  HTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Glycine max]
          Length = 785

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/806 (33%), Positives = 433/806 (53%), Gaps = 90/806 (11%)

Query: 311  WLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
            ++G  +HA +IK G  +  V L   L+N Y K      A++LF E+  L+    WN I+ 
Sbjct: 29   FIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMP-LKTTFSWNTILS 87

Query: 370  VKLRNEKWENAIKLFREMQ-------------------FSSA-----KAISR-------T 398
               +    ++A ++F E+                    F SA     + +S        T
Sbjct: 88   AHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFT 147

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
               +L +CA   A   GK++H +V+K      + V N L++MY++     +A  VFD M+
Sbjct: 148  FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR 207

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
              + S+WN+MIS +      D+A +LF++M      PDI++WN +++G + H  Y     
Sbjct: 208  LKDTSTWNTMISMHMQFCQFDLALALFDQMT----DPDIVSWNSIITG-YCHQGYD---- 258

Query: 519  LLRGMQSLGF-------RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
             +R +++  F       +P+  ++  VL A      LK G++ H +I+R  +D    VG 
Sbjct: 259  -IRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGN 317

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            +L+ MY K+  ++ A  + +                       +     LN         
Sbjct: 318  ALISMYAKSGAVEVAHRIVE-----------------------ITGTPSLN--------- 345

Query: 632  DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
             ++++ SL+ GY   G    A  I   +K    + +VV WT++I G  QN    ++L  F
Sbjct: 346  -VIAFTSLLDGYFKIGDIDPARAIFDSLK----HRDVVAWTAMIVGYAQNGLISDALVLF 400

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
              M +E  KPN+ T++++L     L  L +GK++H + ++   +    V   LI MYS+S
Sbjct: 401  RLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRS 460

Query: 752  GNLKSAREVFRK--SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            G++K AR++F    S   TL +W  MI+  A +G G EAI LF ++L    +PD IT+  
Sbjct: 461  GSIKDARKIFNHICSYRDTL-TWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVG 519

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L+AC + GLVE+G  YF+ M   +NI PT  HY+CM+DLLG+AG L+EA++FIR MP +
Sbjct: 520  VLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIE 579

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            PD   WG+LL SCR+H +++ A++A+ +L  ++P NS  Y  + N L+   +WED  ++R
Sbjct: 580  PDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVR 639

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
             SM +  VK    +SW+QI   VH+F  E A HP    IY  +  +  E+KK+G++PDT 
Sbjct: 640  KSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTN 699

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V  D+++E K ++L  H+EKLAI + L+ T     +R++KN RVC+DCH+A +Y+SL+ 
Sbjct: 700  SVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLV 759

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
             REI +RD  RFHHF++G CSC D W
Sbjct: 760  EREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 233/509 (45%), Gaps = 45/509 (8%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           G+  SA + F          W++ +  Y   G   +  +  +  +   G+       T +
Sbjct: 93  GNLDSARRVFDEIPQPDSVSWTTMIVGYNHLG-LFKSAVHAFLRMVSSGISPTQFTFTNV 151

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L  C    A  +G +VH+ ++K G    V +  +L+N Y KC D   A  +F  +  L+D
Sbjct: 152 LASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR-LKD 210

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREM--------------------------------Q 388
              WN +I + ++  +++ A+ LF +M                                +
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            SS K    T+  +L ACA   +   GKQIH +++++ ++   +V N LISMY+++  +E
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVE 330

Query: 449 LATRVFD--SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +A R+ +       N+ ++ S++  Y  +G +D A ++F+ +       D++ W  ++ G
Sbjct: 331 VAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLK----HRDVVAWTAMIVG 386

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
           +  +G   + L L R M   G +PN  +++ VL  ++ L  L +G++ H   +R      
Sbjct: 387 YAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSS 446

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           + VG +L+ MY ++  +++A+++F+++   R+ + W S+I      GL   A ++  +M 
Sbjct: 447 VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKML 506

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENY 684
              +KPD +++  ++S  +  G  ++     + MKN   I P    +  +I    +    
Sbjct: 507 RINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLL 566

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            E+  F   M    I+P+     SLL +C
Sbjct: 567 EEAYNFIRNMP---IEPDVVAWGSLLSSC 592



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 5/253 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + GD   A   F     R    W++ +  Y    G + + L ++  +  +G  
Sbjct: 351 SLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQ-NGLISDALVLFRLMIREGPK 409

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +  L  +L + + L +   G ++HA  I+      V +  AL+  Y +   ++ A K+
Sbjct: 410 PNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKI 469

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+ +    D L W  +I+   ++     AI+LF +M   + K    T V +L AC  VG 
Sbjct: 470 FNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGL 529

Query: 412 FHEGKQIHGYVLKSA--LESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
             +GK     ++K+   +E   S   C+I +  R   LE A     +M  + ++ +W S+
Sbjct: 530 VEQGKSYFN-LMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSL 588

Query: 469 ISSYTGLGYVDVA 481
           +SS     YVD+A
Sbjct: 589 LSSCRVHKYVDLA 601


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 294/929 (31%), Positives = 469/929 (50%), Gaps = 86/929 (9%)

Query: 183  AKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGD 242
            ++Q   S IS        T +   L      H+ +I +G + +S      LI  Y  F D
Sbjct: 70   SRQTLFSSISRALASAATTTQLHKL------HSLIITLG-LHHSVIFSAKLIAKYAHFRD 122

Query: 243  FTSAAKAFFLYF-SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIIL 301
             TS+   F L   S +   W+S +    +  G   E L ++ E     +   +     ++
Sbjct: 123  PTSSFSVFRLASPSNNVYXWNSIIRAL-THNGLFSEALSLYSETQRIRLQPDTYTFPSVI 181

Query: 302  KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
              C  L+ F +   +H  ++  GF  D+++  AL++ Y +  D++ A K+F E+  L D 
Sbjct: 182  NACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP-LRDV 240

Query: 362  LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
            + WN +I     N  W  A++++   +       S T+  +L+AC  +G+  EG  IHG 
Sbjct: 241  VSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGL 300

Query: 422  VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            + K  ++ ++ V N L+SMY + N L    R+FD M                        
Sbjct: 301  IEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM------------------------ 336

Query: 482  WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                       +  D ++WN ++ G+   G Y+  + L   M +  F+P+  +++ +LQA
Sbjct: 337  -----------VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQA 384

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
               L  L++G+  H Y++ +G + D      L++MY K   L  +QEVF  MK ++ V+W
Sbjct: 385  CGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 444

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------- 636
            NS+I+ Y   G F  A K+   M+ + +KPD V++                         
Sbjct: 445  NSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK 503

Query: 637  ----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                      N+LV  Y+  G+  ++L +  +MK      +++TW ++I+  + +E+   
Sbjct: 504  MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR----DIITWNTIIASCVHSEDCNL 559

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
             L+   +M+ E + P+  TM S+L  C  L   + GKEIH    K G   D  V   LI+
Sbjct: 560  GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIE 619

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MYSK G+L+++ +VF+    K + +W  +I    +YG GK+A+  F E+   G  PD + 
Sbjct: 620  MYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 679

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F A++ AC +SGLVEEG  YF  M  DY I P IEHY+C+VDLL ++  LD+A DFI +M
Sbjct: 680  FVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 739

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            P KPD++IWGALL +CR+ G  E A+  S R+ +L P ++  Y L+ N+ A   +W+ V 
Sbjct: 740  PLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVR 799

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
             +R S+   G+K     SW++I   V+VF           E+   L  L   M K GY+ 
Sbjct: 800  SIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIA 859

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            + + V  DIDE+EK  +L  H+E+LAI +GL+ TK   P++V+KN RVC DCHT  KY+S
Sbjct: 860  NLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYIS 919

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +  RE+ +RD  RFH F++G CSC D W
Sbjct: 920  KIXQRELLVRDANRFHVFKDGACSCGDYW 948


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 786

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/819 (33%), Positives = 432/819 (52%), Gaps = 81/819 (9%)

Query: 297  LTIILKLCTKLM--------AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            L+ +L+LCT L+          +    VH  +IK G  F V+L   LMN Y K      A
Sbjct: 9    LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHA 68

Query: 349  NKLFSEV------------------SDLE------------DDLLWNEIIMVKLRNEKWE 378
             KLF E+                   D++            D + W  +I+      ++ 
Sbjct: 69   RKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYH 128

Query: 379  NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
             AI++  EM     +    T+  +L + A       GK++H +++K  L  N+SV N L+
Sbjct: 129  KAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLL 188

Query: 439  SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            +MY++     +A  VFD M   ++SSWN+MI+ +  +G +D+A + F +M     + DI+
Sbjct: 189  NMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQM----AERDIV 244

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            TWN ++SG+   G     L +   M +     P+  +++ VL A   L  L  G + H +
Sbjct: 245  TWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSH 304

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
            I+  G D                                + +  N+LIS Y   G    A
Sbjct: 305  IVTTGFDI-------------------------------SGIVLNALISMYSRCGGVETA 333

Query: 618  KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
            ++++ Q   +++K +   + +L+ GY   G   EA  I   +K+     +VV WT++I G
Sbjct: 334  RRLIEQRGTKDLKIE--GFTALLDGYIKLGDMNEAKNIFDSLKDR----DVVAWTAMIVG 387

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              Q+  Y E++  F  M  E+ +PNS T++++L     L  L +GK+IH   +K+G I  
Sbjct: 388  YEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYS 447

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
              V+  LI MY+K+G++ SA   F      +   SW  MI+  A +G+ +EA+ LF  +L
Sbjct: 448  VSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
              G +PD IT+  + +AC ++GLV +G +YFD M     IIPT+ HY+CMVDL G+AG L
Sbjct: 508  MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
             EA +FI  MP +PD   WG+LL +CR++ +++  ++A+ RL  LEP NS  Y+ + NL 
Sbjct: 568  QEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLY 627

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            +   +WE+  ++R SM +  VK    +SWI++   VH F  E   HP   EIY  +  + 
Sbjct: 628  SACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIW 687

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
             E+KK+GYVPDT  V  D++EE K ++L  H+EKLAI +GL+ T  +  +R++KN RVC+
Sbjct: 688  DEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCN 747

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            DCHTA K++S + GREI +RD  RFHHF++G CSC D W
Sbjct: 748  DCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 136/565 (24%), Positives = 253/565 (44%), Gaps = 49/565 (8%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + GD  S+ + F     R    W++ +  Y++ G +  + + + GE+  +G+      
Sbjct: 90  YAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIG-QYHKAIRIMGEMMREGIEPSQFT 148

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +L           G +VH+ ++K G   +V +  +L+N Y KC D   A  +F  + 
Sbjct: 149 LTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV 208

Query: 357 DLEDDLLWNEIIMVKLRNEKWE-------------------------------NAIKLFR 385
            ++D   WN +I + ++  + +                                A+ +F 
Sbjct: 209 -VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFS 267

Query: 386 EMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           +M   S  +  R T+  +L ACA +     G+QIH +++ +  + +  V N LISMYSR 
Sbjct: 268 KMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRC 327

Query: 445 NKLELATRVFD--SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
             +E A R+ +    KD  +  + +++  Y  LG ++ A ++F+ +       D++ W  
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDR----DVVAWTA 383

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++ G+  HG Y   + L R M     RPN  +++ +L   + L  L +G++ HG  +++G
Sbjct: 384 MIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSG 443

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKML 621
             Y + V  +L+ MY K   + +A   FD ++  R+ V+W S+I      G    A ++ 
Sbjct: 444 EIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQ 680
             M  E ++PD +++  + S  +  G   +       MK+   I P +  +  ++    +
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK-EIHCLCLKNGFIKDAY 739
               +E+ +F  +M    I+P+  T  SLL  C     +  GK     L L       AY
Sbjct: 564 AGLLQEAQEFIEKMP---IEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAY 620

Query: 740 VATGLIDMYSKSGNLKSAREVFRKS 764
            A  L ++YS  G  + A ++ RKS
Sbjct: 621 SA--LANLYSACGKWEEAAKI-RKS 642



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 124/533 (23%), Positives = 219/533 (41%), Gaps = 117/533 (21%)

Query: 205 RCLSSVKSKHAQMIKMG-----KIWNS---------DDMVKSLIFHYLEFGDFTS----- 245
           RCL + K  H+ ++K+G      + NS         D M+  ++F  +   D +S     
Sbjct: 160 RCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMI 219

Query: 246 -----------AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRS 294
                      A   F     R    W+S +  Y   G +++  L+++ ++    ++   
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRA-LDMFSKMLRDSMLSPD 278

Query: 295 RI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           R  L  +L  C  L    +G ++H+ ++  GFD    +  AL++ Y +C  VE+A +L  
Sbjct: 279 RFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338

Query: 354 E--VSDLE------------------------------DDLLWNEIIMVKLRNEKWENAI 381
           +    DL+                              D + W  +I+   ++  +  AI
Sbjct: 339 QRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAI 398

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            LFR M     +  S T+  ML   + + +   GKQIHG  +KS    ++SV N LI+MY
Sbjct: 399 NLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMY 458

Query: 442 SRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           ++   +  A+R FD ++ + +  SW SMI +    G+ + A  LF  M    ++PD IT+
Sbjct: 459 AKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITY 518

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                                    +G          V  A T   L+  GR+    +  
Sbjct: 519 -------------------------VG----------VFSACTHAGLVNQGRQYFDMM-- 541

Query: 561 NGLDYDLYVGT-----SLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISG-YCFKGL 613
              D D  + T      ++D++ +   LQ AQE  + M    ++V W SL+S    +K +
Sbjct: 542 --KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNI 599

Query: 614 FVN--AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
            +   A + L  +E E       ++++L + YS  G+ +EA  I   MK+  +
Sbjct: 600 DLGKVAAERLLLLEPENSG----AYSALANLYSACGKWEEAAKIRKSMKDGRV 648


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 286/906 (31%), Positives = 457/906 (50%), Gaps = 82/906 (9%)

Query: 211  KSKHAQMIKMGKIWNSDD--MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
            +  HA  +  G +   DD  +   L+F Y   G    A + F    +R+   W++ +  Y
Sbjct: 77   RQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAY 136

Query: 269  ESFGGEVQELLEVWGELHGK---GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             S  G   E + V+G +      G       L  +LK C        G EVH   +K G 
Sbjct: 137  LS-SGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 326  DFDVHLKCALMNFYGKCRDVESANKLFSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            D    +  AL+  Y KC  ++SA ++F  +  D  D   WN ++   ++N +   A+ LF
Sbjct: 196  DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 385  REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            R MQ +     S T V +LQ CA++G    G+++H  +LK   E N+  CN L+ MY++ 
Sbjct: 256  RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQ-CNALLVMYAKY 314

Query: 445  NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +++ A RVF  + + +  SWNSM+S Y    +   A   F +M                
Sbjct: 315  GRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEM---------------- 358

Query: 505  SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
                 H                GF+P+ + V  +  A+  L  L  GRE H Y ++  L 
Sbjct: 359  ---LQH----------------GFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLH 399

Query: 565  YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
             DL VG +LMDMY+K   ++ + +VF++M  R+ ++W ++++ +        A +M+ ++
Sbjct: 400  TDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILEL 459

Query: 625  EEEEIKP----------------------------------DLVSWNSLVSGYSIWGQSK 650
            ++E I                                    DL+  N L+  Y   G+  
Sbjct: 460  QKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFD 519

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
             +L +   ++      ++V+WTS+I+    N     ++  F +MQ+ +I+P+S  + S+L
Sbjct: 520  HSLNLFQRVEKK----DIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSIL 575

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
                GL  L  GK++H   ++  F  +  V + L+DMYS  G++  A  VF ++  K + 
Sbjct: 576  VAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVV 635

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
             W  MI    ++G+GK+AI LF  +L+TG  PD ++F ALL AC +S LVEEG  Y D M
Sbjct: 636  LWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIM 695

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
             + Y + P  EHY+C+VD+LG++G  +EA++FI+TMP  P + +W ALLG+CR+H +   
Sbjct: 696  VSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGL 755

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
            A +A+ +L +LEP N  NY L+ N+ A   +W + +  R  M E G++     SWI+I  
Sbjct: 756  AVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGN 815

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKL-GYVPDTRCVYQDIDEEEKGKVLLSHTE 1009
             +H F++    H  +  I+ +L  +   +++  GYV DTR V  D  EEEK  +L  H+E
Sbjct: 816  NIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSE 875

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            ++AI +GL+ T+   PIR+ KN RVC DCH   K +S +  R+I +RD  RFHHF  G C
Sbjct: 876  RIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSC 935

Query: 1070 SCNDCW 1075
            SC D W
Sbjct: 936  SCEDFW 941



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 185/436 (42%), Gaps = 44/436 (10%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           LS  +  HA ++K G   N      +L+  Y ++G   SA + F     + Y  W+S L 
Sbjct: 283 LSLGRELHAALLKCGSELNIQ--CNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLS 340

Query: 267 DY--ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
            Y   SF     E ++ +GE+   G       +  +      L     G E HA  IK+ 
Sbjct: 341 CYVQNSF---YAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQR 397

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
              D+ +   LM+ Y KC  +E + K+F E   + D + W  I+    ++ +   A+++ 
Sbjct: 398 LHTDLQVGNTLMDMYIKCGSIECSAKVF-ESMGIRDHISWTTILACFAQSSRHSEALEMI 456

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            E+Q       S  I  +L+ C  + +    KQ+H Y +                   RN
Sbjct: 457 LELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAI-------------------RN 497

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             L+L                N +I  Y   G  D + +LF ++     + DI++W  ++
Sbjct: 498 GLLDLILE-------------NRLIDIYGECGEFDHSLNLFQRVE----KKDIVSWTSMI 540

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           +    +G     + L   MQ    +P+  ++  +L A+  L  L  G++ HG+++R    
Sbjct: 541 NCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFP 600

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            +  V +SL+DMY     +  A  VF+  K +++V W ++I+     G    A  +  +M
Sbjct: 601 IEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRM 660

Query: 625 EEEEIKPDLVSWNSLV 640
            +  + PD VS+ +L+
Sbjct: 661 LQTGLTPDHVSFLALL 676



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 164/385 (42%), Gaps = 48/385 (12%)

Query: 538 VLQAVTELRLLKYGRESHGYILRNGL---DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
           VL  V   R    GR+ H + +  G    D D ++ T L+ MY +   + +A+ +F+ M 
Sbjct: 63  VLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMP 122

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI---KPD------------------- 632
            R + +WN+L+  Y   G    A ++   M         PD                   
Sbjct: 123 ARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRC 182

Query: 633 -----------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                            LV+ N+L+  Y+  G    AL +   ++      +V +W S++
Sbjct: 183 GGEVHGLAVKVGLDKSTLVA-NALIGMYAKCGLLDSALRVFEWLQQDA--RDVASWNSVV 239

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
           SG +QN    E+L  F  MQ      NS T  ++LQ C  LGLL  G+E+H   LK G  
Sbjct: 240 SGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSE 299

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
            +      L+ MY+K G + SA  VF + A K   SWN M+  +       EAI  F E+
Sbjct: 300 LNIQ-CNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEM 358

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           L+ GFQPD     +L +A  +   +  G + F + +    +   ++  + ++D+  K G 
Sbjct: 359 LQHGFQPDHACVVSLSSALGHLSRLNNG-REFHAYAIKQRLHTDLQVGNTLMDMYIKCGS 417

Query: 856 LDEAWDFIRTMPFKPDATIWGALLG 880
           ++ +     +M  + D   W  +L 
Sbjct: 418 IECSAKVFESMGIR-DHISWTTILA 441



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 8/172 (4%)

Query: 722 GKEIHCLCLKNGFIK---DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           G+++H   +  G +    D ++AT L+ MY + G +  AR +F     +T+ SWN ++  
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 779 FAIYGNGKEAILLFHELLET---GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
           +   G+  EA+ ++  +  +   G  PD  T  ++L AC   G    G +    ++    
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGE-VHGLAVKVG 194

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP-DATIWGALLGSCRIHG 886
           +  +    + ++ +  K G LD A      +     D   W +++  C  +G
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNG 246



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 136/337 (40%), Gaps = 21/337 (6%)

Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADW 261
            + +S +K  H   I+ G +    D++    LI  Y E G+F  +   F     +    W
Sbjct: 481 LKSISLLKQVHCYAIRNGLL----DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSW 536

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           +S + +  +  G +   + ++ E+    +   S  L  IL     L +   G +VH  LI
Sbjct: 537 TSMI-NCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLI 595

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           +R F  +  +  +L++ Y  C  +  A ++F E +  +D +LW  +I     +   + AI
Sbjct: 596 RRNFPIEGPVVSSLVDMYSGCGSMNYAIRVF-ERAKCKDVVLWTAMINATGMHGHGKQAI 654

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-----IHGYVLKSALESNLSVCNC 436
            LF+ M  +       + + +L AC+      EGK      +  Y LK   E       C
Sbjct: 655 DLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHY----AC 710

Query: 437 LISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
           ++ +  R+ + E A     +M  D   + W +++ +        +A    NK+    ++P
Sbjct: 711 VVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKL--LELEP 768

Query: 496 DIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFRPN 531
           D      L+S  F   G + N       M   G R N
Sbjct: 769 DNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKN 805


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  484 bits (1246), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/808 (33%), Positives = 420/808 (51%), Gaps = 69/808 (8%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            IL+LC +  +   G  V + +   G   D  L   L+  Y KC D++    +F ++S+  
Sbjct: 156  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSE-S 214

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
               LWN +I     +  +  +I LF++M     K  S T   +L+  A V    EG+Q+H
Sbjct: 215  KIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVH 274

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G + K    S  +V N LIS Y    K+  A ++FD + D                    
Sbjct: 275  GLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDR------------------- 315

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            D+I+WN ++SG+  +G     + +   M   G   + +++  V 
Sbjct: 316  ----------------DVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVF 359

Query: 540  QAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
             A   +  L  G+  H Y ++   LD ++    +L+DMY K   L +A  VF+ M  + +
Sbjct: 360  VACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTV 419

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
            V+W S+I+GY  +GL   A K+ ++M+   + PD+ +  S+++  +I G  K   ++  +
Sbjct: 420  VSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDY 479

Query: 659  MKNSGIYPN-------------------------------VVTWTSLISGSLQNENYRES 687
            ++ + +  N                               V++W ++I G  +N    E+
Sbjct: 480  IRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEA 539

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            L  F +MQ+E  KP+ TT++ +L  C  L  L  G+EIH   L+NG+ +D YV   ++DM
Sbjct: 540  LTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDM 598

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y K G L  AR +F    NK L SW  MI G+ ++G G EAI  F+++  TG +PD ++F
Sbjct: 599  YVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSF 658

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
             ++L AC +SGL++EGWK F+ M  +  I P +EHY+CMVDLL + G L +A  FI+ MP
Sbjct: 659  ISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMP 718

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
             KPDATIWGALL  CRIH  ++ AE  + R+F+LEP N+  Y L+ N+ A + +WE+V++
Sbjct: 719  IKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQK 778

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            LR  + + G+K     SWI+I   +++F A     P   +I   L  L S+MK+ GY P 
Sbjct: 779  LRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPK 838

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSL 1047
            T     + DE EK   L  H+EKLA+ +G++       IRV KN RVC DCH  AK+MS 
Sbjct: 839  TAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSK 898

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
               REI LRD +RFHHF++G CSC   W
Sbjct: 899  SASREIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 163/616 (26%), Positives = 279/616 (45%), Gaps = 78/616 (12%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L+F Y++ GD       F          W+  + +Y S  G   E + ++ ++   G+  
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEY-SGSGNYGESINLFKQMLELGIKP 249

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
            S   + ILK    +     G +VH  + K GF+    +  +L++FY   R V  A KLF
Sbjct: 250 NSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLF 309

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            E++D  D + WN +I   ++N   +  I++F +M          T+V +  ACA +G  
Sbjct: 310 DELTD-RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTL 368

Query: 413 HEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
             GK +H Y +K+A L+  +   N L+ MYS+   L  A RVF+ M +  + SW SMI+ 
Sbjct: 369 LLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITG 428

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y   G  D A  LF++M S  + PD+     +L+    +G+                   
Sbjct: 429 YVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGN------------------- 469

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
                           LK G+  H YI  N L+ + +V  +L DMY K   +++A +VF 
Sbjct: 470 ----------------LKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFS 513

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD-------LVSWNSL----- 639
           +MK +++++WN++I GY    L   A  +  +M+ E  KPD       L +  SL     
Sbjct: 514 HMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDK 572

Query: 640 ---VSGYSIW-GQSKEALV---IIHHMKNSGIY----------PN--VVTWTSLISGSLQ 680
              + GY++  G S++  V   ++      G+           PN  +V+WT +I+G   
Sbjct: 573 GREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGM 632

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK---D 737
           +    E++  F QM+   I+P+  +  S+L  C   GLL  G +I  +  K   I+   +
Sbjct: 633 HGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLE 692

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELL 796
            Y    ++D+ +++GNL  A +  +    K  A+ W  ++ G  I+ + K A  +   + 
Sbjct: 693 HYAC--MVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIF 750

Query: 797 ETGFQPDAITFTALLA 812
           E   +P+   +  LLA
Sbjct: 751 E--LEPENTGYYVLLA 764



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 234/519 (45%), Gaps = 52/519 (10%)

Query: 204 FRCLSSV------KSKHAQMIKMGKIWNS-DDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            +C ++V      +  H  + K+G  +NS + +V SLI  Y        A K F     R
Sbjct: 258 LKCFAAVARVEEGRQVHGLICKLG--FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDR 315

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               W+S +  Y   G +    +E++ ++   GV      +  +   C  +    LG  +
Sbjct: 316 DVISWNSMISGYVKNGLD-DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVL 374

Query: 317 HASLIKRG-FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           H+  IK    D +V     L++ Y KC D+ SA ++F E  D +  + W  +I   +R  
Sbjct: 375 HSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVF-ERMDEKTVVSWTSMITGYVREG 433

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             + AIKLF EM+          +  +L ACA  G    GK +H Y+ ++ LE+N  V N
Sbjct: 434 LSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSN 493

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L  MY++   ++ A  VF  MK                                   + 
Sbjct: 494 ALTDMYAKCGSMKDAHDVFSHMK-----------------------------------KK 518

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D+I+WN ++ G+  +      LTL   MQ    +P+G++V+ +L A   L  L  GRE H
Sbjct: 519 DVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIH 577

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
           GY LRNG   D YV  +++DMYVK   L  A+ +FD + N+++V+W  +I+GY   G   
Sbjct: 578 GYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGS 637

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSL 674
            A    NQM    I+PD VS+ S++   S  G   E   I + MK    I PN+  +  +
Sbjct: 638 EAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACM 697

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +    +  N  ++ KF   M    IKP++T   +LL  C
Sbjct: 698 VDLLARTGNLVKAHKFIKAMP---IKPDATIWGALLCGC 733



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 170/401 (42%), Gaps = 48/401 (11%)

Query: 583 LQNAQEVFDNMKNRN--IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
           L+NA E+  + +N N  + A+ S++     +    + +++ + +E   +  D +    LV
Sbjct: 133 LKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLV 192

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             Y   G  KE  ++   +  S I+     W  +IS    + NY ES+  F QM +  IK
Sbjct: 193 FMYVKCGDLKEGRMVFDKLSESKIF----LWNLMISEYSGSGNYGESINLFKQMLELGIK 248

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           PNS T SS+L+    +  ++ G+++H L  K GF     V   LI  Y     ++ A+++
Sbjct: 249 PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKL 308

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
           F +  ++ + SWN MI G+   G     I +F ++L  G   D  T   +  AC N G +
Sbjct: 309 FDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTL 368

Query: 821 EEGWKYFDSMSTDYNIIP-TIEHYSCMVDLLGKAGYLDEA-------------------- 859
             G K   S S     +   +   + ++D+  K G L+ A                    
Sbjct: 369 LLG-KVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMIT 427

Query: 860 --------------WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR--RLFKLEP 903
                         +D +++    PD     ++L +C I+G+L+  +I     R   LE 
Sbjct: 428 GYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLET 487

Query: 904 CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            NS   N + ++ A     +D   +   M +   K V+ W+
Sbjct: 488 -NSFVSNALTDMYAKCGSMKDAHDVFSHMKK---KDVISWN 524


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Vitis vinifera]
          Length = 849

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/813 (32%), Positives = 439/813 (53%), Gaps = 79/813 (9%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
             I+L+LCT +      + +   +IK G   +   +  L++ + K   +  A ++F  + D
Sbjct: 81   AILLELCTSMKELHQFIPL---IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIED 137

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              D+L ++ ++    RN   ++A+  F  M++   + +      +L+ C       +GK+
Sbjct: 138  KIDEL-YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKE 196

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            IH  ++ +   SN+     +++MY++   +E A ++FD M +                  
Sbjct: 197  IHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPER----------------- 239

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
                              D++ WN ++SG+  +G  +  L L+  MQ  G RP+  ++  
Sbjct: 240  ------------------DLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVS 281

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            +L AV ++  L+ GR  HGY +R G +  + V T+L+DMY K   +  A+ +FD M  + 
Sbjct: 282  ILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKT 341

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK--------------------------- 630
            +V+WNS+I GY   G    A ++  +M +E+++                           
Sbjct: 342  VVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHK 401

Query: 631  --------PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                     D+   NSL+S YS   +   A  I  +++    +  +V+W ++I G  QN 
Sbjct: 402  LLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ----HKTLVSWNAMILGYAQNG 457

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               E++ +F +MQ ++IKP+S TM S++     L +L   K IH L ++    K+ +VAT
Sbjct: 458  RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVAT 517

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             L+DMY+K G + +AR++F     + + +WN MI G+  +G GK A+ LF ++ +   +P
Sbjct: 518  ALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKP 577

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + +TF  +L+AC +SGLVEEG++YF SM  DY + P ++HY  MVDLLG+A  L+EAWDF
Sbjct: 578  NEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDF 637

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I+ MP +P  +++GA+LG+CRIH ++E  E A+ R+F L+P +   + L+ N+ A ++ W
Sbjct: 638  IQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMW 697

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            + V R+R +M++ G++    WS +++   VH F +    HP   +IY  L  L + +K  
Sbjct: 698  DKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAA 757

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GY+PDT  V+ D+++  K ++L SH+EKLAI + L+ T     I + KN RVC DCH A 
Sbjct: 758  GYMPDTNSVH-DVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNAT 816

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KY+SLV  REI +RD  RFHHF++G CSC D W
Sbjct: 817  KYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 242/548 (44%), Gaps = 72/548 (13%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L+  + +FG    AA+ F     +    + + L+ Y +    + + +  +  +   GV  
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY-ARNSSLDDAVSFFCRMRYDGVRP 173

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
                T +LK+C        G E+H  LI  GF  +V     ++N Y KCR VE A K+F
Sbjct: 174 VVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             + +  D + WN II    +N   + A++L   MQ    +  S TIV +L A A VG+ 
Sbjct: 234 DRMPE-RDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 292

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G+ IHGY +++  ES ++V   L+ MYS+   +  A  +FD M    + SWNSMI  Y
Sbjct: 293 RIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGY 352

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL----------SGHFTH--------GSYQ 514
              G    A  +F KM   +++   +T    L           G F H        GS  
Sbjct: 353 VQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDV 412

Query: 515 NVLTLLRGMQS---------------------------LGF------------------- 528
           +V+  L  M S                           LG+                   
Sbjct: 413 SVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQ 472

Query: 529 --RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
             +P+  ++  V+ A+ EL +L   +  HG ++R  LD +++V T+L+DMY K   +  A
Sbjct: 473 NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           +++FD M  R++  WN++I GY   GL   A ++  +M++E IKP+ V++  ++S  S  
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592

Query: 647 GQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
           G  +E       MK   G+ P +  + +++    +     E+  F   +Q+  I+P  + 
Sbjct: 593 GLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDF---IQKMPIEPAISV 649

Query: 706 MSSLLQTC 713
             ++L  C
Sbjct: 650 FGAMLGAC 657



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 6/277 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + G   +A   F     ++   W+S ++ Y    G+    +E++ ++  + V 
Sbjct: 316 ALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQ-NGDPGAAMEIFQKMMDEQVE 374

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +  +   L  C  L     G  VH  L +     DV +  +L++ Y KC+ V+ A ++
Sbjct: 375 MTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEI 434

Query: 352 FSEVSDLEDDLL--WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           F    +L+   L  WN +I+   +N +   AI  F +MQ  + K  S T+V ++ A A++
Sbjct: 435 FE---NLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAEL 491

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
               + K IHG V+++ L+ N+ V   L+ MY++   +  A ++FD M + ++++WN+MI
Sbjct: 492 SVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMI 551

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             Y   G    A  LF KM    I+P+ +T+ C+LS 
Sbjct: 552 DGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSA 588


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa
            Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa
            Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 280/893 (31%), Positives = 455/893 (50%), Gaps = 73/893 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            HA ++K G + +   +   LI  Y +      A + F       +  WSS +  Y S  G
Sbjct: 27   HANLLKSGFLAS---LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAY-SNNG 82

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              +  ++ +  +  +GV      L ++LK         LG +VHA  +  GF  DV +  
Sbjct: 83   LPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ---LGAQVHAMAMATGFGSDVFVAN 139

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            AL+  YG    ++ A ++F E     + + WN ++   ++N++  +AI++F EM +S  +
Sbjct: 140  ALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                    ++ AC        G+Q+H  V++   E ++   N L+ MY +          
Sbjct: 200  PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK---------- 249

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
                                 +G VD+A  +F KM  S    D+++WN L+SG   +G  
Sbjct: 250  ---------------------MGRVDIASVIFEKMPDS----DVVSWNALISGCVLNGHD 284

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
               + LL  M+S G  PN   +S +L+A         GR+ HG++++   D D Y+G  L
Sbjct: 285  HRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            +DMY KN  L +A +VFD M +R+++ WN+LISG    G    A  +   + +E +  + 
Sbjct: 345  VDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNR 404

Query: 634  VSWNSLV-SGYSIWGQS----------KEALVIIHHMKNSGI------------------ 664
             +  +++ S  S+   S          K   +   H+ N  I                  
Sbjct: 405  TTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEE 464

Query: 665  --YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                +++  TS+I+   Q ++   ++K F++M ++ ++P+   +SSLL  C  L   + G
Sbjct: 465  CSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            K++H   +K  F+ DA+    L+  Y+K G+++ A   F     + + SW+ MI G A +
Sbjct: 525  KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQH 584

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G+GK A+ LF  +++ G  P+ IT T++L AC ++GLV+E  +YF+SM   + I  T EH
Sbjct: 585  GHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEH 644

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            YSCM+DLLG+AG LD+A + + +MPF+ +A++WGALLG+ R+H   E  ++A+ +LF LE
Sbjct: 645  YSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILE 704

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P  S  + L+ N  A S  W +V ++R  M +  +K     SW+++   VH F      H
Sbjct: 705  PEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSH 764

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P T EIY +L  L   M K GY+P+      D+D  EK  +L  H+E+LA+ + L+ T  
Sbjct: 765  PMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPP 824

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             APIRV KN R+C DCH A K++S +  REI +RD  RFHHFR+G CSC D W
Sbjct: 825  GAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 155/615 (25%), Positives = 274/615 (44%), Gaps = 75/615 (12%)

Query: 309 AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
           A   G  +HA+L+K G  F   L+  L++FY KCR    A ++F E+ D    + W+ ++
Sbjct: 19  ALLPGAHLHANLLKSG--FLASLRNHLISFYSKCRRPCCARRVFDEIPD-PCHVSWSSLV 75

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
                N    +AI+ F  M+ +     +   + ++  C        G Q+H   + +   
Sbjct: 76  TAYSNNGLPRSAIQAFHGMR-AEGVCCNEFALPVVLKCVPDAQL--GAQVHAMAMATGFG 132

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           S++ V N L++MY     ++ A RVFD    + N  SWN ++S+Y        A  +F +
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M  S IQP    ++C                                   V+ A T  R 
Sbjct: 193 MVWSGIQPTEFGFSC-----------------------------------VVNACTGSRN 217

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           +  GR+ H  ++R G + D++   +L+DMYVK   +  A  +F+ M + ++V+WN+LISG
Sbjct: 218 IDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG 277

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------VSGYSIWGQSKE- 651
               G    A ++L QM+   + P++   +S+               + G+ I   +   
Sbjct: 278 CVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSD 337

Query: 652 -----ALVIIH---HMKNSGI-------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
                 LV ++   H  +  +       + +++ W +LISG      + E+   F  +++
Sbjct: 338 DYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRK 397

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           E +  N TT++++L++   L      +++H L  K GFI DA+V  GLID Y K   L  
Sbjct: 398 EGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSD 457

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           A  VF + ++  + +   MI   +   +G+ AI LF E+L  G +PD    ++LL AC +
Sbjct: 458 AIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACAS 517

Query: 817 SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
               E+G K   +       +      + +V    K G +++A     ++P +     W 
Sbjct: 518 LSAYEQG-KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER-GVVSWS 575

Query: 877 ALLGSCRIHGHLEYA 891
           A++G    HGH + A
Sbjct: 576 AMIGGLAQHGHGKRA 590


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Brachypodium distachyon]
          Length = 919

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 280/878 (31%), Positives = 442/878 (50%), Gaps = 76/878 (8%)

Query: 233  LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
            LI  Y + G    A + F     R    W + L  Y    G  +E + ++ E+H  GV+ 
Sbjct: 83   LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ-NGLGEEAVRLYREMHRSGVVP 141

Query: 293  RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               +L+ IL  CTK   F LG  +H  + K+GF  +  +  AL++ Y +CR    A+++F
Sbjct: 142  TPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVF 201

Query: 353  SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             ++    D + +N +I    +    + A+ +F EMQ S     S TI  +L AC+ VG  
Sbjct: 202  CDMLYC-DSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260

Query: 413  HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             +GKQ+H Y+LK+ +  +  +   L+ +Y ++  +E A ++FDS    N+  WN M+ +Y
Sbjct: 261  RKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAY 320

Query: 473  TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              +  +  ++ +F +M ++                                   G RPN 
Sbjct: 321  GQIDDLAKSFDIFYRMLAA-----------------------------------GVRPNK 345

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             +   +L+  T    +  G + H   ++NG   D+YV   L+DMY K   L  AQ + D 
Sbjct: 346  FTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDM 405

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS----------------- 635
            ++ +++V+W S+I+GY        A +   +M+   I PD +                  
Sbjct: 406  IEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQG 465

Query: 636  ------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                              WN LV  Y+  G SKEA      ++    +   +TW  LISG
Sbjct: 466  SQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIE----HKEGITWNGLISG 521

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              Q+  Y E+LK F++M Q   K N  T  S +     L  ++ GK+IH   +K G+  +
Sbjct: 522  FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSE 581

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
              ++  LI +Y K G+++ A+  F +   +   SWN +I   + +G G EA+ LF ++ +
Sbjct: 582  TEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQ 641

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G +P  +TF  +L AC + GLVEEG  YF SMS ++ I P  +HY+C+VD+LG+AG LD
Sbjct: 642  QGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLD 701

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
             A  F+  MP   D+ +W  LL +C++H +LE  E A++ L +LEP +SA+Y L+ N  A
Sbjct: 702  RAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYA 761

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
            ++ +W   +++R  M + GV+     SWI++  +VH F      HP   +IY  L HL  
Sbjct: 762  VTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLND 821

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
             + K+GY  +   ++ + ++E K      H+EKLA+ +GLM   S  P+RVIKN RVC+D
Sbjct: 822  RLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCND 881

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CHT  K+ S V GREI LRD  RFHHF  G CSC D W
Sbjct: 882  CHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 210/503 (41%), Gaps = 86/503 (17%)

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IH   +   L     + N LI +Y++   +  A RVF+ +   +  SW +++S Y   G
Sbjct: 63  EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  L+ +M+ S                                   G  P    +S
Sbjct: 123 LGEEAVRLYREMHRS-----------------------------------GVVPTPYVLS 147

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +L A T+  L + GR  H  + + G   + +VG +L+ +Y++    + A  VF +M   
Sbjct: 148 SILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYC 207

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------------- 642
           + V +N+LISG+   G    A  + ++M+   + PD V+  SL++               
Sbjct: 208 DSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLH 267

Query: 643 ---------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                                Y   G  +EAL I     +SG   NVV W  ++    Q 
Sbjct: 268 SYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF----DSGDRTNVVLWNLMLVAYGQI 323

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
           ++  +S   F +M    ++PN  T   +L+TC   G +  G++IH L +KNGF  D YV+
Sbjct: 324 DDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVS 383

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             LIDMYSK G L  A+ +      K + SW  MI G+  +   KEA+  F E+   G  
Sbjct: 384 GVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIW 443

Query: 802 PDAITFTALLAACKNSGLVEEGWK-----YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
           PD I   + ++AC     V +G +     Y    S D +I      ++ +V L  + G  
Sbjct: 444 PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSI------WNGLVYLYARCGIS 497

Query: 857 DEAWDFIRTMPFKPDATIWGALL 879
            EA+     +  K   T W  L+
Sbjct: 498 KEAFSSFEAIEHKEGIT-WNGLI 519



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 177/384 (46%), Gaps = 36/384 (9%)

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           E H   +  GL     +G  L+D+Y K   ++ A+ VF+ +  R+ V+W +++SGY   G
Sbjct: 63  EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS--------------IWGQS-------KE 651
           L   A ++  +M    + P     +S++S  +              ++ Q          
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182

Query: 652 ALVIIHHMKNS----------GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
           AL+ ++    S           +Y + VT+ +LISG  Q  +   +L  F +MQ   + P
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +S T++SLL  C  +G L+ GK++H   LK G   D  +   L+D+Y KSG+++ A ++F
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF 302

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                  +  WN M++ +    +  ++  +F+ +L  G +P+  T+  +L  C ++G + 
Sbjct: 303 DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIG 362

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            G +   S++        +     ++D+  K G+LD+A   I  M  + D   W +++  
Sbjct: 363 LG-EQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKA-QRILDMIEEKDVVSWTSMIAG 420

Query: 882 CRIHGHLEYAEIASRRLFKLEPCN 905
              H   E+ + A     +++ C 
Sbjct: 421 YVQH---EFCKEALETFKEMQACG 441



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/321 (20%), Positives = 131/321 (40%), Gaps = 43/321 (13%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN-GKEIHCLCLKNG 733
           ++G L  ++  + L  F    ++ +   +   +  L+ C G G       EIH   +  G
Sbjct: 13  LAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKAIICG 72

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
                 +   LID+Y+K G ++ AR VF + + +   SW  ++ G+A  G G+EA+ L+ 
Sbjct: 73  LSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYR 132

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEG------------------------------ 823
           E+  +G  P     +++L+AC  + L + G                              
Sbjct: 133 EMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCR 192

Query: 824 -WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA---WDFIRTMPFKPDATIWGALL 879
            ++  D +  D     ++  ++ ++    + G+ D A   +D ++     PD+    +LL
Sbjct: 193 SFRLADRVFCDMLYCDSVT-FNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLL 251

Query: 880 GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
            +C   G L   +     L K     S +Y +  +LL +  +  D+E      D     +
Sbjct: 252 AACSAVGDLRKGKQLHSYLLK--AGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTN 309

Query: 940 VLVW-----SWIQIDQIVHVF 955
           V++W     ++ QID +   F
Sbjct: 310 VVLWNLMLVAYGQIDDLAKSF 330


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 289/885 (32%), Positives = 450/885 (50%), Gaps = 106/885 (11%)

Query: 255  SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            SRS A W   L    +   + +E +  + E+   G    +     +LK  + L     G 
Sbjct: 54   SRSTASWVDALRS-RTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 315  EVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            ++HA+ +K G+    V +   L+N YGKC  +    K+F  ++D  D + WN  I    R
Sbjct: 113  QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITD-RDQVSWNSFIAALCR 171

Query: 374  NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE---GKQIHGYVLKSALESN 430
             EKWE A++ FR MQ  + +  S T+V +  AC+ +G  H    GKQ+HGY L+      
Sbjct: 172  FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLR------ 225

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
                                      + D    + N++++ Y  LG VD + +LF     
Sbjct: 226  --------------------------VGDQKTFTNNALMAMYAKLGRVDDSKALFE---- 255

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
            S +  D+++WN ++S       +   L   R M   G   +G +++ VL A + L  L  
Sbjct: 256  SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 315

Query: 551  GRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G+E H Y+LRN  L  + +VG++L+DMY     +++ + VFD++  R I  WN++ISGY 
Sbjct: 316  GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 375

Query: 610  -----------------FKGLFVNAKKMLNQM----------EEEEI---------KPDL 633
                               GL  N   M + M           +E I         K D 
Sbjct: 376  RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDR 435

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
               N+L+  YS  G+   +  I   M+      + V+W ++I+G + +  Y  +L    +
Sbjct: 436  YVQNALMDMYSRMGKMDISETIFDSME----VRDRVSWNTMITGYVLSGRYSNALVLLHE 491

Query: 694  MQQED-----------------IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            MQ+ +                  KPN+ T+ ++L  C  L  +  GKEIH   ++N    
Sbjct: 492  MQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLAS 551

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            D  V + L+DMY+K G L  +R VF +  NK + +WN +IM   ++G G+EA+ LF  ++
Sbjct: 552  DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 611

Query: 797  -ETG----FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
             E G     +P+ +TF  + AAC +SGL+ EG   F  M  D+ + PT +HY+C+VDLLG
Sbjct: 612  AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 671

Query: 852  KAGYLDEAWDFIRTMPFKPDAT-IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            +AG L+EA++ + TMP + D    W +LLG+CRIH ++E  E+A++ L  LEP  +++Y 
Sbjct: 672  RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYV 731

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ + +  W     +R +M ++GVK     SWI+    VH F A    HP + +++ 
Sbjct: 732  LLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHG 791

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L  +M+K GYVPDT CV  ++DE+EK  +L  H+EKLAI +G++ T     IRV K
Sbjct: 792  FLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAK 851

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC+DCH A K++S +  REI +RD  RFHHF+EG CSC D W
Sbjct: 852  NLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 18/295 (6%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  HA +++   +  +  +  +L+  Y       S  + F     R    W++ +  Y  
Sbjct: 317 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 376

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
            G + + L+     +   G++  +  +  ++  C    AF     +H   +K GF  D +
Sbjct: 377 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRY 436

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF- 389
           ++ ALM+ Y +   ++ +  +F  + ++ D + WN +I   + + ++ NA+ L  EMQ  
Sbjct: 437 VQNALMDMYSRMGKMDISETIFDSM-EVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRM 495

Query: 390 ----------------SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                              K  + T++ +L  CA + A  +GK+IH Y +++ L S+++V
Sbjct: 496 ENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITV 555

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            + L+ MY++   L L+ RVF+ M + N+ +WN +I +    G  + A  LF  M
Sbjct: 556 GSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNM 610


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 307/949 (32%), Positives = 482/949 (50%), Gaps = 93/949 (9%)

Query: 211  KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY-- 268
            K  HA+++  G   +   +  +L+  Y + G  +SA + F     R    W++ L  Y  
Sbjct: 641  KCTHARIVVSGSAGDHF-LSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699

Query: 269  --ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
              +S  G  QE L ++  L           L  +LKLC      W    VH   IK G +
Sbjct: 700  SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759

Query: 327  FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII--MVKLRNEKWENAIKLF 384
            +DV +  AL+N Y KC  +  A  LF  + +  D +LWN ++   V+L  EK   A +LF
Sbjct: 760  WDVFVSGALVNIYSKCGRMRDARLLFDWMRE-RDVVLWNMMLKGYVQLGLEK--EAFQLF 816

Query: 385  REMQFSSAKAISRTIVKMLQACAKVGAFHEGK----QIHGYVLKSALESN---------- 430
             E   S  +    ++  +L   ++V  + EGK    Q+  Y  K +L  +          
Sbjct: 817  SEFHRSGLRPDEFSVQLILNGVSEVN-WDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKK 875

Query: 431  LSVC----------NCLISMYSRN------------------NKLELATRV----FDSMK 458
            LS C           C ++M   N                  + LEL  +V      S  
Sbjct: 876  LSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGL 935

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
            D ++S  NS+++ Y+ +G    A  +FN M       D+I+WN ++S        +  + 
Sbjct: 936  DSDVSVANSLVNMYSKMGCAYFAREVFNDMK----HLDLISWNSMISSCAQSSLEEESVN 991

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTEL-RLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
            L   +   G +P+  +++ VL+A + L   L   R+ H + L+ G   D +V T+L+D+Y
Sbjct: 992  LFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVY 1051

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
             K+  ++ A+ +F N  + ++  WN+++ GY        A ++ + + +   K D ++  
Sbjct: 1052 SKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLA 1111

Query: 638  S----------LVSGYSIWGQSKEA---------------LVIIHHMKNSGIY------P 666
            +          L  G  I   + +A                +    M N+GI       P
Sbjct: 1112 TAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAP 1171

Query: 667  NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            + V WTS+ISG + N N  ++L+ + +M+Q  + P+  T ++L++    +  L+ G+++H
Sbjct: 1172 DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH 1231

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               +K   + D +V T L+DMY+K GN++ A  +F+K   + +A WN M++G A +GN +
Sbjct: 1232 ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAE 1291

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            EA+ LF  +   G +PD ++F  +L+AC ++GL  E ++Y  SM  DY I P IEHYSC+
Sbjct: 1292 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCL 1351

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VD LG+AG + EA   I TMPFK  A+I  ALLG+CRI G +E  +  + RLF LEP +S
Sbjct: 1352 VDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDS 1411

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            A Y L+ N+ A +NRW+DV   R  M    VK    +SWI +  ++H+F  +   HP   
Sbjct: 1412 AAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQAD 1471

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
             IY ++  ++  +++ GYVPDT  V  D+++EEK + L  H+EKLAI YGL+ T +   I
Sbjct: 1472 IIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTI 1531

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVIKN RVC DCH A KY+S V  REI LRD  RFHHFR+G CSC D W
Sbjct: 1532 RVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 167/676 (24%), Positives = 299/676 (44%), Gaps = 93/676 (13%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+         LG   HA ++  G   D  L   L+  Y KC  + SA ++F    +  
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPE-R 685

Query: 360  DDLLWNEII-----MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
            D + WN I+      V   +   +  + LFR ++ S       T+  +L+ C   G    
Sbjct: 686  DLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWA 745

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
             + +HGY +K  LE ++ V   L+++YS+  ++  A  +FD M++ ++  WN M+  Y  
Sbjct: 746  AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805

Query: 475  LGYVDVAWSLFNKMNSSRIQ---------------------------------------- 494
            LG    A+ LF++ + S ++                                        
Sbjct: 806  LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDD 865

Query: 495  -PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
             PD+  WN  LS     G     +     M  L    +  ++ VVL AV     L+ G++
Sbjct: 866  NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQ 925

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             HG  +++GLD D+ V  SL++MY K  C   A+EVF++MK+ ++++WNS+IS      L
Sbjct: 926  VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSL 985

Query: 614  FVNAKKMLNQMEEEEIKPD-------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
               +  +   +  E +KPD       L + +SL+ G +I  Q     + +H +K   I  
Sbjct: 986  EEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQ-----IHVHALKTGNIAD 1040

Query: 667  NVVT------------------------------WTSLISGSLQNENYRESLKFFIQMQQ 696
            + V                               W +++ G +   + +++L+ F  + +
Sbjct: 1041 SFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHK 1100

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
               K +  T+++  + CG L LL  GK+IH   +K GF  D +V +G++DMY K G++ +
Sbjct: 1101 SGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVN 1160

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A  VF   +     +W  MI G    GN  +A+ ++H + ++   PD  TF  L+ A   
Sbjct: 1161 AGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC 1220

Query: 817  SGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
               +E+G + + + +  D    P +   + +VD+  K G +++A+   + M  + +  +W
Sbjct: 1221 VTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALW 1277

Query: 876  GALLGSCRIHGHLEYA 891
             A+L     HG+ E A
Sbjct: 1278 NAMLVGLAQHGNAEEA 1293



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 6/253 (2%)

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
            L   K  HA  IK G  ++SD  V S I   Y++ GD  +A   F    +     W+S +
Sbjct: 1123 LDQGKQIHAHAIKAG--FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMI 1180

Query: 266  EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
                  G E Q  L ++  +    V+        ++K  + + A   G ++HA++IK   
Sbjct: 1181 SGCVDNGNEDQA-LRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDC 1239

Query: 326  DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
              D  +  +L++ Y KC ++E A +LF ++ ++ +  LWN +++   ++   E A+ LF+
Sbjct: 1240 VSDPFVGTSLVDMYAKCGNIEDAYRLFKKM-NVRNIALWNAMLVGLAQHGNAEEAVNLFK 1298

Query: 386  EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRN 444
             M+    +    + + +L AC+  G   E  + +H       +E  +   +CL+    R 
Sbjct: 1299 SMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA 1358

Query: 445  NKLELATRVFDSM 457
              ++ A +V ++M
Sbjct: 1359 GLVQEADKVIETM 1371


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 279/828 (33%), Positives = 442/828 (53%), Gaps = 91/828 (10%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIK--------RGFDFDVHLKCALMNFYGKCRDVESAN 349
            T++L+ C +  + + G  +H  L+K           +FDV  +  L++ Y  C +++ A 
Sbjct: 13   TVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFE-KLVDLYIACSELKIAR 71

Query: 350  KLFSEVSDLEDDL-LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F ++     ++ LWN +I     N  +E AI L+ +M          T   +L+AC+ 
Sbjct: 72   HVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSA 131

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
            +    EG++IH  + +  LESN+ V   L+  Y++                         
Sbjct: 132  LKEASEGREIHCDIKRLRLESNVYVSTALVDFYAK------------------------- 166

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLG 527
                   G +D A  +F+KM+    + D++ WN ++SG   H GSY  V  LL  MQ+  
Sbjct: 167  ------CGCLDDAKEVFDKMH----KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-D 215

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              PN S++  VL AV ++  L++G+E HG+ +R G   D+ VGT ++D+Y K  C+  A+
Sbjct: 216  VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYAR 275

Query: 588  EVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQ--MEEEEIKP------------- 631
             +FD M   +N V W++++  Y        A ++  Q  M ++++               
Sbjct: 276  RIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVC 335

Query: 632  -----------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
                                   DL+  N+L+S Y+  G    A+   + M       + 
Sbjct: 336  ANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMD----LRDA 391

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            V++T++ISG +QN N  E L+ F++MQ   I P   T++S+L  C  L  L  G   HC 
Sbjct: 392  VSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCY 451

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             +  GF  D  +   LIDMY+K G + +AR+VF +   + + SWN MI+ + I+G G EA
Sbjct: 452  AIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEA 511

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +LLF  +   G +PD +TF  L++AC +SGLV EG  +F++M+ D+ IIP +EHY+CMVD
Sbjct: 512  LLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVD 571

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LL +AG   E   FI  MP +PD  +WGALL +CR++ ++E  E  S+++ KL P ++ N
Sbjct: 572  LLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGN 631

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG-APHPATGE 967
            + L+ N+ +   RW+D  ++R +  E G +     SWI+I  +VH F   G   HP   +
Sbjct: 632  FVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQ 691

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I  +L  L+ EMK+LGY  ++  V+QD++EEEK +VLL H+EKLAI +G++       I 
Sbjct: 692  ISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHII 751

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V KN RVC DCHTA K++SLV  R+I +RD +RFHHF++G C+C D W
Sbjct: 752  VTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 215/486 (44%), Gaps = 43/486 (8%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + G    A + F     R    W+S +  +    G   E+  +  ++    V 
Sbjct: 159 ALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-VS 217

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S  +  +L    ++ +   G E+H   ++RGF  DV +   +++ YGKC+ ++ A ++
Sbjct: 218 PNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRI 277

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI---SRTIVKMLQACAK 408
           F  +  +++++ W+ ++   +  +    A++LF ++       I   + T+  +++ CA 
Sbjct: 278 FDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCAN 337

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +     G  +H Y +KS    +L V N L+SMY++   +  A R F+ M   +  S+ ++
Sbjct: 338 LTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAI 397

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           IS Y   G  +    +F +M  S                                   G 
Sbjct: 398 ISGYVQNGNSEEGLRMFLEMQLS-----------------------------------GI 422

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            P  ++++ VL A   L  L YG  SH Y +  G   D  +  +L+DMY K   +  A++
Sbjct: 423 NPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARK 482

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VFD M  R IV+WN++I  Y   G+ + A  + + M+ E +KPD V++  L+S  S  G 
Sbjct: 483 VFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGL 542

Query: 649 SKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             E     + M ++ GI P +  +  ++    +   ++E   F  +M  E   P+     
Sbjct: 543 VAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLE---PDVRVWG 599

Query: 708 SLLQTC 713
           +LL  C
Sbjct: 600 ALLSAC 605



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/563 (22%), Positives = 237/563 (42%), Gaps = 78/563 (13%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+  +  Y ++ G  +E ++++ ++ G G+         +LK C+ L     G E+H  +
Sbjct: 87  WNLLIRAY-AWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDI 145

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM-VKLRNEKWEN 379
            +   + +V++  AL++FY KC  ++ A ++F ++    D + WN +I    L    ++ 
Sbjct: 146 KRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHK-RDVVAWNSMISGFSLHEGSYDE 204

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
             +L  +MQ +     S TIV +L A A+V +   GK+IHG+ ++     ++ V   ++ 
Sbjct: 205 VARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILD 263

Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           +Y +   ++ A R+FD M    N  +W++M+ +Y    ++  A  LF ++    ++ D+I
Sbjct: 264 VYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL--LMLKDDVI 321

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
             + +                              +++ V++    L  L  G   H Y 
Sbjct: 322 VLSAV------------------------------TLATVIRVCANLTDLSTGTCLHCYA 351

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
           +++G   DL VG +L+ MY K   +  A   F+ M  R+ V++ ++ISGY   G      
Sbjct: 352 IKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGL 411

Query: 619 KMLNQMEEEEIKP-----------------------------------DLVSWNSLVSGY 643
           +M  +M+   I P                                   D +  N+L+  Y
Sbjct: 412 RMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMY 471

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
           +  G+   A  +   M   GI    V+W ++I     +    E+L  F  MQ E +KP+ 
Sbjct: 472 AKCGKIDTARKVFDRMHKRGI----VSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDD 527

Query: 704 TTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
            T   L+  C   GL+  GK   + +    G I        ++D+ S++G  K       
Sbjct: 528 VTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIE 587

Query: 763 K-SANKTLASWNCMIMGFAIYGN 784
           K      +  W  ++    +Y N
Sbjct: 588 KMPLEPDVRVWGALLSACRVYKN 610


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/745 (35%), Positives = 422/745 (56%), Gaps = 50/745 (6%)

Query: 356  SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            SD+++   WN  I   +R  +   A+++F+ M   S+ + +     M+    + G F   
Sbjct: 62   SDIKE---WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN----GMISGYLRNGEFELA 114

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            +++         E +L   N +I  Y RN  L  A  +F+ M + ++ SWN+M+S Y   
Sbjct: 115  RKL----FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL--------- 526
            G VD A S+F++M     + + ++WN LLS +  +   +    L +  ++          
Sbjct: 171  GCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226

Query: 527  -GFRPNGSSV-------SVVLQAVTELRLLKYGRESHGYI--LRNGLD----YDLYVGTS 572
             GF      V       S+ ++ V     +  G    G I   R   D     D++  T+
Sbjct: 227  GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP- 631
            ++  Y++N  ++ A+E+FD M  RN V+WN++++GY      V  ++M    E  ++ P 
Sbjct: 287  MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGY------VQGERMEMAKELFDVMPC 340

Query: 632  -DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
             ++ +WN++++GY+  G+  EA  +   M       + V+W ++I+G  Q+ +  E+L+ 
Sbjct: 341  RNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRL 396

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F+QM++E  + N ++ SS L TC  +  L+ GK++H   +K G+    +V   L+ MY K
Sbjct: 397  FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             G+++ A ++F++ A K + SWN MI G++ +G G+ A+  F  +   G +PD  T  A+
Sbjct: 457  CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L+AC ++GLV++G +YF +M+ DY ++P  +HY+CMVDLLG+AG L++A + ++ MPF+P
Sbjct: 517  LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            DA IWG LLG+ R+HG+ E AE A+ ++F +EP NS  Y L+ NL A S RW DV +LR 
Sbjct: 577  DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
             M + GVK V  +SWI+I    H FS     HP   EI+  L  L   MKK GYV  T  
Sbjct: 637  RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSV 696

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
            V  D++EEEK +++  H+E+LA+ YG+M+  S  PIRVIKN RVC DCH A KYM+ + G
Sbjct: 697  VLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITG 756

Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
            R I LRD  RFHHF++G CSC D W
Sbjct: 757  RLIILRDNNRFHHFKDGSCSCGDYW 781



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 47/350 (13%)

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           D D+      +  Y++      A  VF  M   + V++N +ISGY   G F  A+K+ ++
Sbjct: 61  DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120

Query: 624 MEEEEIKPDLVSWNSLVSGY---SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
           M E     DLVSWN ++ GY      G+++E   I+          +V +W +++SG  Q
Sbjct: 121 MPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPER-------DVCSWNTMLSGYAQ 169

Query: 681 NENYRESLKFFIQM-QQEDIKPNS-----TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           N    ++   F +M ++ D+  N+        S + + C      +N   +   CL  GF
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229

Query: 735 IKDAYVATG-----------------LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
           +K   +                    +I  Y++SG +  AR++F +S  + + +W  M+ 
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
           G+      +EA  LF ++ E     + +++ A+LA       +E   + FD M       
Sbjct: 290 GYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPC----- 340

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
             +  ++ M+    + G + EA +    MP K D   W A++      GH
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGH 389



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 7/301 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + G  + A   F     R    W++ +  Y S  G   E L ++ ++  +G  
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY-SQSGHSFEALRLFVQMEREGGR 406

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                 +  L  C  ++A  LG ++H  L+K G++    +  AL+  Y KC  +E AN L
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E++  +D + WN +I    R+   E A++ F  M+    K    T+V +L AC+  G 
Sbjct: 467 FKEMAG-KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525

Query: 412 FHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G+Q  +       +  N     C++ +  R   LE A  +  +M  + + + W +++
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGF 528
            +    G  ++A +  +K+ +  ++P+      LLS  + + G + +V  L   M+  G 
Sbjct: 586 GASRVHGNTELAETAADKIFA--MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643

Query: 529 R 529
           +
Sbjct: 644 K 644


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 934

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 290/895 (32%), Positives = 453/895 (50%), Gaps = 75/895 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            HA +IK G     D  V + + H Y  FG        F      +   W+S +  Y ++ 
Sbjct: 82   HAHVIKCG--LACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGY-AYN 138

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G V+E++ V+  L   GV      +  +++ C  L+   LG +V  S+IK G D  V + 
Sbjct: 139  GCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVA 198

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             +L++ +G C  +E A+ +F ++ +  D + WN II   + N   E +++ F +M+++ A
Sbjct: 199  NSLISMFGNCDSIEEASCVFDDMKE-RDTISWNSIITASVHNGHCEKSLEYFSQMRYTHA 257

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            K    TI  +L  C        G+ +HG V+KS LESN+ VCN L+SMYS+  K E A  
Sbjct: 258  KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEF 317

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            V                               F+KM     + D+I+WN +++ H  +G+
Sbjct: 318  V-------------------------------FHKMR----ERDLISWNSMMASHVDNGN 342

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            Y   L LL  M       N  + +  L A   L  LK     H +++  GL ++L +G +
Sbjct: 343  YPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNA 399

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+ MY K   +  AQ V   M +R+ V WN+LI G+        A +  N + EE +  +
Sbjct: 400  LVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVN 459

Query: 633  LVSWNSLVSGYSIWGQSKEALVIIH-HMKNSGIYPNVVTWTSLIS-----GSLQNENY-- 684
             ++  +L+S +       +  + IH H+  +G        +SLI+     G L   NY  
Sbjct: 460  YITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIF 519

Query: 685  ------------------------RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                                     E+LK  I+M+ + I  +  + S      G L LL 
Sbjct: 520  DVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLD 579

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             G+++H L +K+GF  + YV    +DMY K G +     +  +  +++  SWN +I   A
Sbjct: 580  EGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALA 639

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
             +G  ++A   FHE+L+ G +PD +TF +LL+AC + GLV+EG  YF SMST + +   I
Sbjct: 640  RHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGI 699

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            EH  C++DLLG+AG L EA +FI  MP  P   +W +LL +C+IHG+LE A  A+ RLF+
Sbjct: 700  EHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFE 759

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            L+  + + Y L  N+ A + RW DVE +R  M+   +K     SW+++   V  F     
Sbjct: 760  LDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQ 819

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP   EIY +L  L   +++ GY+PDT    QD DEE+K   L +H+E++A+ +GL+ +
Sbjct: 820  YHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINS 879

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               +P+R+ KN RVC DCH+  K +S + GR+I LRD  RFHHF  G+CSC+D W
Sbjct: 880  SEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 170/705 (24%), Positives = 317/705 (44%), Gaps = 89/705 (12%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y +FG    A   F     R+ A W++ +  +   G   Q+ ++ +  +   GV   S +
Sbjct: 2   YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGW-YQKAMQFFCHMLEHGVRPSSYV 60

Query: 297 LTIILKLCTKLMAFWLGV-EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
              ++  C +      G  +VHA +IK G   DV +  +L++FYG    V   + +F E+
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            +  + + W  +++    N   +  + ++R ++          +  ++++C  +     G
Sbjct: 121 EE-PNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            Q+ G V+KS L++ +SV N LISM+   + +E A+ VFD MK+ +  SWNS+I++    
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G+ + +   F++M  +  + D IT + LL      GS QN                    
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLP---VCGSAQN-------------------- 276

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
                       L++GR  HG ++++GL+ ++ V  SL+ MY +    ++A+ VF  M+ 
Sbjct: 277 ------------LRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRE 324

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------- 636
           R++++WNS+++ +   G +  A ++L +M +     + V++                   
Sbjct: 325 RDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAF 384

Query: 637 -------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                        N+LV+ Y  +G    A  +   M +     + VTW +LI G   N+ 
Sbjct: 385 VILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDR----DEVTWNALIGGHADNKE 440

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQT-CGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              +++ F  +++E +  N  T+ +LL        LL +G  IH   +  GF  + +V +
Sbjct: 441 PNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQS 500

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            LI MY++ G+L ++  +F   ANK  ++WN ++   A YG G+EA+ L  ++   G   
Sbjct: 501 SLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHL 560

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSM------STDYNIIPTIEHYSCMVDLLGKAGYL 856
           D  +F+   A   N  L++EG +    +      S DY +  T+       D+ GK G +
Sbjct: 561 DQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATM-------DMYGKCGEI 613

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
           D+ +  I   P       W  L+ +   HG  + A  A   +  L
Sbjct: 614 DDVFR-ILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDL 657



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 226/517 (43%), Gaps = 88/517 (17%)

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MYS+   +E A  VFD M + N +SWN+++S     G+V V W                 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMS-----GFVRVGW----------------- 38

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR-ESHGYI 558
                        YQ  +     M   G RP+    + ++ A      +  G  + H ++
Sbjct: 39  -------------YQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEGAFQVHAHV 85

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF---- 614
           ++ GL  D++VGTSL+  Y     +     VF  ++  NIV+W SL+ GY + G      
Sbjct: 86  IKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVM 145

Query: 615 --------------------------VNAKKMLN-QMEEEEIKPDLVSW----NSLVSGY 643
                                     V   KML  Q+    IK  L +     NSL+S +
Sbjct: 146 SVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMF 205

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                 +EA  +   MK      + ++W S+I+ S+ N +  +SL++F QM+    K + 
Sbjct: 206 GNCDSIEEASCVFDDMKER----DTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDY 261

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            T+S+LL  CG    L+ G+ +H + +K+G   +  V   L+ MYS++G  + A  VF K
Sbjct: 262 ITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHK 321

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              + L SWN M+      GN   A+ L  E+L+T    + +TFT  L+AC N   ++  
Sbjct: 322 MRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIV 381

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             +   +   +N+I      + +V + GK G +  A    + MP + + T W AL+G   
Sbjct: 382 HAFVILLGLHHNLIIG----NALVTMYGKFGSMAAAQRVCKIMPDRDEVT-WNALIG--- 433

Query: 884 IHGHLEYAEI-ASRRLFKL--EPCNSANYNLMMNLLA 917
             GH +  E  A+   F L  E     NY  ++NLL+
Sbjct: 434 --GHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLS 468



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 180/424 (42%), Gaps = 37/424 (8%)

Query: 124 CVGSSQLTRQNTAIVMPKLHSIYHHFNTRTSINQNR--HSHKPNSITNSPTSLALPPTDT 181
           CV +S L+  + A        ++H    R  I+ N    SH  N   N P +L L     
Sbjct: 297 CVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNG--NYPRALEL----- 349

Query: 182 LAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFG 241
           L +  Q    ++   F    +    L ++K  HA +I +G + ++  +  +L+  Y +FG
Sbjct: 350 LIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLG-LHHNLIIGNALVTMYGKFG 408

Query: 242 DFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIIL 301
              +A +   +   R    W++ +  +     E    +E +  L  +GV      +TI+ 
Sbjct: 409 SMAAAQRVCKIMPDRDEVTWNALIGGHAD-NKEPNAAIEAFNLLREEGVPVN--YITIVN 465

Query: 302 KLCTKLMAFWL---GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
            L   L    L   G+ +HA ++  GF+ +  ++ +L+  Y +C D+ ++N +F  +++ 
Sbjct: 466 LLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLAN- 524

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQ----------FSSAKAISRTIVKMLQACAK 408
           ++   WN I+         E A+KL  +M+          FS A AI             
Sbjct: 525 KNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAI----------IGN 574

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +    EG+Q+H  ++K   ESN  V N  + MY +  +++   R+    +  +  SWN +
Sbjct: 575 LTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNIL 634

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           IS+    G+   A   F++M    ++PD +T+  LLS     G     L     M +   
Sbjct: 635 ISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFG 694

Query: 529 RPNG 532
            P G
Sbjct: 695 VPTG 698


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 776

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/749 (35%), Positives = 418/749 (55%), Gaps = 58/749 (7%)

Query: 356  SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            SD+++   WN  I   +R  +   A+++F+ M   S+ + +     M+    + G F   
Sbjct: 57   SDIKE---WNVAISSYMRTGRCSEALRVFKRMPRWSSVSYN----AMISGYLRNGEFELA 109

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            + +         E +L   N +I  Y RN  L  A  +F+ M + ++ SWN+++S Y   
Sbjct: 110  RML----FDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQN 165

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G VD A  +F++M     + + ++WN LLS +  +   +    L       G R N + V
Sbjct: 166  GCVDDARRVFDRMP----EKNDVSWNALLSAYVQNSKLEEACVLF------GSRENWALV 215

Query: 536  S--------VVLQAVTELR----------LLKYGRESHGYILRNGLD-----------YD 566
            S        V  + + E R          ++ +     GY     +D           +D
Sbjct: 216  SWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHD 275

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            ++  T+++  Y++N  ++ A+E+FD M  RN V+WN++++GY        AK++ + M  
Sbjct: 276  VFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPC 335

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
              +     +WN++++GY+  G+  EA  +   M       + V+W ++I+G  Q+ +  E
Sbjct: 336  RNVS----TWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSYE 387

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +L+ F+ M++E  + N ++ SS L TC  +  L+ GK++H   +K G+    +V   L+ 
Sbjct: 388  ALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 447

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY K G+++ A ++F++ A K + SWN MI G++ +G G+EA+  F  +   G +PD  T
Sbjct: 448  MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDAT 507

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
              A+L+AC ++GLV++G +YF +M+ DY + P  +HY+CMVDLLG+AG L+EA + ++ M
Sbjct: 508  MVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNM 567

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            PF+PDA IWG LLG+ R+HG+ E AE A+ ++F +EP NS  Y L+ NL A S RW DV 
Sbjct: 568  PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 627

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            +LR  M + GVK V  +SWI+I    H FS     HP   EI+  L  L   MKK GYV 
Sbjct: 628  KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVS 687

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
             T  V  D++EEEK +++  H+E+LA+ YG+M+  S  PIRVIKN RVC DCH A KYM+
Sbjct: 688  KTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMA 747

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             V GR I LRD  RFHHF++G CSC D W
Sbjct: 748  KVTGRLIILRDNNRFHHFKDGSCSCGDYW 776



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 167/348 (47%), Gaps = 15/348 (4%)

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V   C L  F  K + VE+  + F +   + D + WN II    +N + + A +LF E  
Sbjct: 215 VSWNCLLGGFVKKKKIVEA--RQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESP 272

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                    T   M+    +     E +++         E N    N +++ Y +  ++E
Sbjct: 273 VHDV----FTWTAMVSGYIQNRMVEEAREL----FDRMPERNEVSWNAMLAGYVQGERVE 324

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           +A  +FD M   N+S+WN+MI+ Y   G +  A +LF+KM     + D ++W  +++G+ 
Sbjct: 325 MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYS 380

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             G     L L   M+  G R N SS S  L    ++  L+ G++ HG +++ G +   +
Sbjct: 381 QSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 440

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           VG +L+ MY K   ++ A ++F  M  ++IV+WN++I+GY   G    A +    M+ E 
Sbjct: 441 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG 500

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLI 675
           +KPD  +  +++S  S  G   +     H M ++ G+ PN   +  ++
Sbjct: 501 LKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMV 548



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 123/552 (22%), Positives = 227/552 (41%), Gaps = 102/552 (18%)

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           T+      D ++  WN  ISSY   G    A  +F +M     +   +++N ++SG+  +
Sbjct: 48  TKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMP----RWSSVSYNAMISGYLRN 103

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVS--VVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
           G ++    L   M      P    VS  V+++     R L   RE    +     + D+ 
Sbjct: 104 GEFELARMLFDEM------PERDLVSWNVMIKGYVRNRNLGKARE----LFERMPERDVC 153

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY-------------------- 608
              +++  Y +N C+ +A+ VFD M  +N V+WN+L+S Y                    
Sbjct: 154 SWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWA 213

Query: 609 -----CFKGLFVNAKKML--NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
                C  G FV  KK++   Q  +     D+VSWN++++GY+  G+  EA      + +
Sbjct: 214 LVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEA----RQLFD 269

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                +V TWT+++SG +QN    E+ + F +M +     N  + +++L        ++ 
Sbjct: 270 ESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEM 325

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            KE+  +       ++      +I  Y++ G +  A+ +F K   +   SW  MI G++ 
Sbjct: 326 AKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 381

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKN------------------------- 816
            G+  EA+ LF  +   G + +  +F++ L+ C +                         
Sbjct: 382 SGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 441

Query: 817 ----------SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
                      G +EE    F  M+        I  ++ M+    + G+ +EA  F  +M
Sbjct: 442 GNALLLMYCKCGSIEEANDLFKEMAG-----KDIVSWNTMIAGYSRHGFGEEALRFFESM 496

Query: 867 P---FKPDATIWGALLGSCRIHGHLEYAEIASRRL---FKLEPCNSANYNLMMNLLAMSN 920
                KPD     A+L +C   G ++        +   + + P NS +Y  M++LL  + 
Sbjct: 497 KREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRP-NSQHYACMVDLLGRAG 555

Query: 921 RWEDVERLRHSM 932
             E+   L  +M
Sbjct: 556 LLEEAHNLMKNM 567



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 136/301 (45%), Gaps = 7/301 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + G  + A   F     R    W++ +  Y S  G   E L ++  +  +G  
Sbjct: 343 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY-SQSGHSYEALRLFVLMEREGGR 401

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                 +  L  C  ++A  LG ++H  L+K G++    +  AL+  Y KC  +E AN L
Sbjct: 402 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 461

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E++  +D + WN +I    R+   E A++ F  M+    K    T+V +L AC+  G 
Sbjct: 462 FKEMAG-KDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGL 520

Query: 412 FHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G+Q  H       +  N     C++ +  R   LE A  +  +M  + + + W +++
Sbjct: 521 VDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGF 528
            +    G  ++A +  +K+ +  ++P+      LLS  + + G + +V  L   M+  G 
Sbjct: 581 GASRVHGNTELAETAADKIFA--MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 638

Query: 529 R 529
           +
Sbjct: 639 K 639


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  481 bits (1238), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/713 (35%), Positives = 395/713 (55%), Gaps = 36/713 (5%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA ++K G   D HL   L++ Y        A  +   V +  +   ++ +I    + 
Sbjct: 34   QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE-PNVFSFSTLIYAFSKF 92

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             ++ +A+  F +M        +R +   ++ACA + A    +Q+HG    S  +S+  V 
Sbjct: 93   HQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            + L+ MY + N++  A RVFD M + ++ SW++++++Y   G VD A  LF++M  S +Q
Sbjct: 153  SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P++I+WN +++G    G Y   + +   M   GF P+G+++S VL AV +L  L  G   
Sbjct: 213  PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            HGY+++ GL  D  V ++L+DMY K  C     +VFD M + ++        G C     
Sbjct: 273  HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV--------GSC----- 319

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                                  N+ + G S  GQ + +L +   +K+ G+  NVV+WTS+
Sbjct: 320  ----------------------NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSM 357

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+   QN    E+L+ F +MQ   +KPNS T+  LL  CG +  L +GK  HC  L+ G 
Sbjct: 358  IACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              D YV + LIDMY+K G ++++R  F     K L  WN +I G+A++G  KEA+ +F  
Sbjct: 418  STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +  +G +PD I+FT +L+AC  SGL EEG  YF+SMS+ Y I   +EHY+CMV LL +AG
Sbjct: 478  MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             L++A+  IR MP  PDA +WGALL SCR+H ++   E+A+ +LF+LEP N  NY L+ N
Sbjct: 538  KLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSN 597

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A    W +V R+R  M   G++     SWI++   VH+  A    HP   +I   L  
Sbjct: 598  IYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDK 657

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            L  EMKKLGY P+   V QD++E++K ++L  H+EKLA+V+GL+ T    P++
Sbjct: 658  LSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQ 710



 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 256/547 (46%), Gaps = 50/547 (9%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           LS  +  HA ++K G ++N   +   L+ HY     F  A     L    +   +S+ + 
Sbjct: 29  LSQTRQAHAHILKTG-LFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            +  F  +    L  + ++  +G++  +R+L   +K C  L A     +VH      GFD
Sbjct: 88  AFSKFH-QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146

Query: 327 FDVHLKCALMNFYGKC---RD----------------------------VESANKLFSEV 355
            D  ++ +L++ Y KC   RD                            V+ A +LFSE+
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206

Query: 356 SD--LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            D  ++ +L+ WN +I     +  +  A+ +F +M     +    TI  +L A   +   
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G  IHGYV+K  L S+  V + LI MY + +     ++VFD M   ++ S N+ I   
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
           +  G V+ +  LF ++    ++ ++++W  +++    +G     L L R MQ  G +PN 
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNS 386

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++  +L A   +  L +G+ +H + LR G+  D+YVG++L+DMY K   +Q ++  FD 
Sbjct: 387 VTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDG 446

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           +  +N+V WN++I+GY   G    A ++ + M+    KPD++S+  ++S  S  G ++E 
Sbjct: 447 IPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506

Query: 653 LVIIHHMKNS-GIYPNVVTWTSLIS-----GSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
               + M +  GI   V  +  +++     G L+        + +  +++  + P++   
Sbjct: 507 SYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLE--------QAYAMIRRMPVNPDACVW 558

Query: 707 SSLLQTC 713
            +LL +C
Sbjct: 559 GALLSSC 565



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/533 (23%), Positives = 234/533 (43%), Gaps = 109/533 (20%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           ++  TI+  L +     +  + +Q H ++LK+ L ++  +   L+S Y+ N     AT V
Sbjct: 13  SVQHTILNCLNS--TTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLV 70

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            D + + N+ S++++I +++       A S F++M                         
Sbjct: 71  LDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQM------------------------- 105

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
                L RG+      P+   +   ++A   L  LK  R+ HG    +G D D +V +SL
Sbjct: 106 -----LTRGLM-----PDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSL 155

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           + MY+K + +++A  VFD M   ++V+W++L++ Y  +G    AK++ ++M +  ++P+L
Sbjct: 156 VHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNL 215

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           +SWN +++G++                +SG+Y                    E++  F+ 
Sbjct: 216 ISWNGMIAGFN----------------HSGLY-------------------SEAVLMFLD 240

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY----- 748
           M     +P+ TT+SS+L   G L  L  G  IH   +K G + D  V++ LIDMY     
Sbjct: 241 MHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSC 300

Query: 749 --------------------------SKSGNLKSAREVFRKSANK----TLASWNCMIMG 778
                                     S++G ++S+  +FR+  ++     + SW  MI  
Sbjct: 301 TSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIAC 360

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            +  G   EA+ LF E+   G +P+++T   LL AC N   +  G K     S    I  
Sbjct: 361 CSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHG-KAAHCFSLRRGIST 419

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            +   S ++D+  K G +  +      +P K +   W A++    +HG  + A
Sbjct: 420 DVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAKEA 471



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 19/199 (9%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           NSTT +SL QT          ++ H   LK G   D ++AT L+  Y+ +     A  V 
Sbjct: 23  NSTT-ASLSQT----------RQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVL 71

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                  + S++ +I  F+ +     A+  F ++L  G  PD     + + AC     ++
Sbjct: 72  DLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK 131

Query: 822 EGWKYFDSMS-TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
              +     S + ++    ++  S +V +  K   + +A      M F+PD   W AL+ 
Sbjct: 132 PARQVHGIASVSGFDSDSFVQ--SSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVA 188

Query: 881 SCRIHGHLEYAEIASRRLF 899
           +    G ++ A    +RLF
Sbjct: 189 AYARQGCVDEA----KRLF 203


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 283/900 (31%), Positives = 447/900 (49%), Gaps = 111/900 (12%)

Query: 246  AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
            A + F    +R    W+S    Y + G   Q+ L V+ ++    V      ++ IL  C+
Sbjct: 94   ARRVFDDLVARDVVTWNSLSACYVNCGFP-QQGLNVFRKMGLNKVKANPLTVSSILPGCS 152

Query: 306  KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
             L     G E+H  +++ G   DV +  A +NFY KC  V  A  +F ++    D + WN
Sbjct: 153  DLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF-DLMPHRDVVTWN 211

Query: 366  EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
             +    +     +  + +FREM     K    T+  +L AC+ +     GK IHG+ LK 
Sbjct: 212  SLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKH 271

Query: 426  ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
             +  N+ V N L+++Y     +  A  VFD M   N+ +WNS+ S Y   G+     ++F
Sbjct: 272  GMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVF 331

Query: 486  NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
             +M  + ++PD +                                   ++S +L A ++L
Sbjct: 332  REMGLNGVKPDPM-----------------------------------AMSSILPACSQL 356

Query: 546  RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
            + LK G+  HG+ +++G+  D++V T+L+++Y    C++ AQ VFD M +RN+V WNSL 
Sbjct: 357  KDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLS 416

Query: 606  SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------------------------- 636
            S Y   G       +  +M    +KPDLV+                              
Sbjct: 417  SCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMV 476

Query: 637  ------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
                  N+L+S Y+     +EA V+   +     +  V +W  +++    N+ Y + L  
Sbjct: 477  EDVFVCNALLSLYAKCVCVREAQVVFDLIP----HREVASWNGILTAYFTNKEYEKGLYM 532

Query: 691  FIQMQQEDI-----------------------------------KPNSTTMSSLLQTCGG 715
            F QM ++++                                   KP+ TT+ S+L+ C  
Sbjct: 533  FSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSL 592

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
               L+ GKEIHC   ++    D      L+DMY+K G L  +R VF     K + SWN M
Sbjct: 593  SECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTM 652

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I    ++GNGKEA+ LF ++L +  +PD+ TFT +L+AC +S LVEEG + F+SMS D+ 
Sbjct: 653  IFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHL 712

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            + P  EHY+C+VD+  +AG L+EA+ FI+ MP +P A  W A L  CR++ ++E A+I++
Sbjct: 713  VEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISA 772

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            ++LF+++P  SANY  + N+L  +  W +  ++R  M E G+      SW  +   VH F
Sbjct: 773  KKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTF 832

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    +  + +IY  L  L +++K  GY PDT  V  DID+EEK + L +H+EKLA+ +
Sbjct: 833  VAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAF 892

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            G++    ++ IRV KN R+C DCH A KYMS V G  I +RD  RFHHF+ G CSC D W
Sbjct: 893  GILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 253/523 (48%), Gaps = 15/523 (2%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF-LYF 254
           C L+  +  + L S K+ H   +K G + N    V + + +  E       A+A F L  
Sbjct: 247 CILSACSDLQDLKSGKAIHGFALKHGMVENV--FVSNALVNLYESCLCVREAQAVFDLMP 304

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            R+   W+S    Y + G   Q+ L V+ E+   GV      ++ IL  C++L     G 
Sbjct: 305 HRNVITWNSLASCYVNCGFP-QKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGK 363

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            +H   +K G   DV +  AL+N Y  C  V  A  +F ++    + + WN +    +  
Sbjct: 364 TIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVF-DLMPHRNVVTWNSLSSCYVNC 422

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              +  + +FREM  +  K    T++ +L AC+ +     GK IHG+ ++  +  ++ VC
Sbjct: 423 GFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVC 482

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L+S+Y++   +  A  VFD +    ++SWN ++++Y      +    +F++MN   ++
Sbjct: 483 NALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            D ITW+ ++ G   +   +  + + R MQ++GF+P+ +++  +L+A +    L+ G+E 
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEI 602

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H Y+ R+  D+DL    +L+DMY K   L  ++ VFD M  +++ +WN++I      G+ 
Sbjct: 603 HCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFA---NGMH 659

Query: 615 VNAKKMLNQMEE---EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVT 670
            N K+ L+  E+     +KPD  ++  ++S  S     +E + I + M ++  + P    
Sbjct: 660 GNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEH 719

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +T ++    +     E+  F  +M  E   P +    + L  C
Sbjct: 720 YTCVVDIYSRAGCLEEAYGFIQRMPME---PTAIAWKAFLAGC 759



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/531 (24%), Positives = 241/531 (45%), Gaps = 68/531 (12%)

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           AIK++   +    K      + + +ACA      + KQ H    +  + S++S+ N  I 
Sbjct: 24  AIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIH 83

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            Y +   +E A RVFD +                                   +  D++T
Sbjct: 84  AYGKCKCVEGARRVFDDL-----------------------------------VARDVVT 108

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           WN L + +   G  Q  L + R M     + N  +VS +L   ++L+ LK G+E HG+++
Sbjct: 109 WNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVV 168

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           R+G+  D++V ++ ++ Y K  C++ AQ VFD M +R++V WNSL S Y   G       
Sbjct: 169 RHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLN 228

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMKNS------------ 662
           +  +M  + +KPD V+ + ++S  S       G++     + H M  +            
Sbjct: 229 VFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYE 288

Query: 663 ------------GIYP--NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                        + P  NV+TW SL S  +     ++ L  F +M    +KP+   MSS
Sbjct: 289 SCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSS 348

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           +L  C  L  L++GK IH   +K+G ++D +V T L+++Y+    ++ A+ VF    ++ 
Sbjct: 349 ILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRN 408

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
           + +WN +   +   G  ++ + +F E++  G +PD +T  ++L AC +   ++ G K   
Sbjct: 409 VVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG-KVIH 467

Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
             +  + ++  +   + ++ L  K   + EA      +P +  A+ W  +L
Sbjct: 468 GFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVAS-WNGIL 517



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 182/407 (44%), Gaps = 34/407 (8%)

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           HG     + +    ++ G +P+      V +A    R     ++ H    R G+  D+ +
Sbjct: 18  HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           G + +  Y K  C++ A+ VFD++  R++V WNSL + Y   G       +  +M   ++
Sbjct: 78  GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137

Query: 630 KPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMKNS---------------------- 662
           K + ++ +S++ G S       G+     V+ H M                         
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 663 --GIYP--NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
              + P  +VVTW SL S  +     ++ L  F +M  + +KP+  T+S +L  C  L  
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L++GK IH   LK+G +++ +V+  L+++Y     ++ A+ VF    ++ + +WN +   
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
           +   G  ++ + +F E+   G +PD +  +++L AC     ++ G K     +  + ++ 
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG-KTIHGFAVKHGMVE 376

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            +   + +V+L      + EA      MP + +   W + L SC ++
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNS-LSSCYVN 421


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/849 (31%), Positives = 445/849 (52%), Gaps = 70/849 (8%)

Query: 258  YADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
            +  WSS +  Y S  G  +  ++ +  +  +GV      L ++LK         LG +VH
Sbjct: 68   HVSWSSLVTAY-SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGAQVH 123

Query: 318  ASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
            A  +  GF  DV +  AL+  YG    ++ A ++F+E     + + WN ++   ++N++ 
Sbjct: 124  AMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQC 183

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
             +AI++F EM +S  +        ++ AC        G+Q+H  V++   + ++   N L
Sbjct: 184  GDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANAL 243

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
            + MY +  ++++A+ +F+ M D ++ SWN++IS                           
Sbjct: 244  VDMYMKMGRVDIASVIFEKMPDSDVVSWNALIS--------------------------- 276

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                C+L+GH         + LL  M+  G  PN  ++S +L+A +       GR+ HG+
Sbjct: 277  ---GCVLNGH-----DHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGF 328

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
            +++   D D Y+G  L+DMY KN  L +A++VFD M +R+++  N+LISG    G    A
Sbjct: 329  MIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEA 388

Query: 618  KKMLNQMEEEEIKPDLVSWNSLV-SGYSIWGQS----------KEALVIIHHMKNSGI-- 664
              +  ++ +E +  +  +  +++ S  S+   S          K   +   H+ N  I  
Sbjct: 389  LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDS 448

Query: 665  ------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
                                +++  TS+I+   Q ++   ++K F++M ++ ++P+   +
Sbjct: 449  YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
            SSLL  C  L   + GK++H   +K  F+ DA+    L+  Y+K G+++ A   F     
Sbjct: 509  SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            + + SW+ MI G A +G+GK A+ LF  +++ G  P+ IT T++L AC ++GLV+E  +Y
Sbjct: 569  RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F+SM   + I  T EHYSCM+DLLG+AG LD+A + + +MPF+ +A+IWGALLG+ R+H 
Sbjct: 629  FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHK 688

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
              E  ++A+ +LF LEP  S  + L+ N  A +  W +V ++R  M +  +K     SWI
Sbjct: 689  DPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWI 748

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            ++   VH F      HP T EIY +L  L   M K G+VP+      D+D  EK  +L  
Sbjct: 749  EVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSH 808

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            H+E+LA+ + L+ T   APIRV KN R+C DCH A K++S +  REI +RD  RFHHFR+
Sbjct: 809  HSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRD 868

Query: 1067 GECSCNDCW 1075
            G CSC D W
Sbjct: 869  GTCSCGDYW 877



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 6/223 (2%)

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P  V+W+SL++    N   R +++ F  M+ E +  N   +  +L+      L   G ++
Sbjct: 66  PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQV 122

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS-ANKTLASWNCMIMGFAIYGN 784
           H + +  GF  D +VA  L+ MY   G +  AR VF ++ + +   SWN ++  +     
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQ 182

Query: 785 GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
             +AI +F E++ +G QP    F+ ++ AC  S  +E G +   +M         +   +
Sbjct: 183 CGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAG-RQVHAMVVRMGYDKDVFTAN 241

Query: 845 CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            +VD+  K G +D A      MP   D   W AL+  C ++GH
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 283


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
            [Vitis vinifera]
          Length = 836

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 289/893 (32%), Positives = 467/893 (52%), Gaps = 99/893 (11%)

Query: 198  LNETNKFRC---LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFG-------DFTSAA 247
            LNE+   RC   L+ +K  H Q+ K     N  D + S +   +  G           A 
Sbjct: 28   LNES--LRCCKTLNQLKQLHCQITK-----NGLDQIPSTLTKLVNAGAEIASPESLDYAR 80

Query: 248  KAFFLYFSRSYAD-----WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILK 302
            KAF L+     +D      +S +  Y S  G  +E + ++  +   GV         +L 
Sbjct: 81   KAFELFKEDVRSDDALFMLNSLIRGYSS-AGLGREAILLYVRMLVLGVTPNHYTFPFVLS 139

Query: 303  LCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
             CTK+ AF  G++VH S++K G + DV ++  L++FY +C  ++  +K+F  +S+  + +
Sbjct: 140  GCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE-RNVV 198

Query: 363  LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
             W  +I    R ++ + A+ LF EM  +  +  S T+V ++ ACAK+     G+++  Y+
Sbjct: 199  SWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYI 258

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
             +  L+ N  + N L+ MY +   ++ A R+FD   D NL  +N+++S+Y   G    A 
Sbjct: 259  GELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREAL 318

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            ++ ++M     +PD +T   +LS                                 + A 
Sbjct: 319  AILDEMLQQGPRPDRVT---MLSA--------------------------------ISAS 343

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             +L  L YG+  HGY++RNGL+    +G  ++DMY+K    + A  VFD M N+ +V+WN
Sbjct: 344  AQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWN 403

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
            SL +G+   G   +A ++ NQ+ E     + V WN+++SG                    
Sbjct: 404  SLTAGFIRNGDVESAWEVFNQIPER----NAVFWNTMISG-------------------- 439

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                       L+  SL    + ++++ F +MQ E IK +  TM  +   CG LG  +  
Sbjct: 440  -----------LVQKSL----FEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELA 484

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            K +H    KNG   D  + T L+DM+++ G+ +SA +VF K   + +++W   I   A+ 
Sbjct: 485  KWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAME 544

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            GNG+ A  LF+++L  G +PD + F  +L AC + G VE+G   F S+  D+ I P IEH
Sbjct: 545  GNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEH 603

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            Y CMVDLLG+AG L EA+D I++MP +P+  +WG+LL +CR+H ++E A  A+ R+ +L 
Sbjct: 604  YGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELA 663

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P  +  + L+ N+ A + +W DV R+R ++ E GV+ V   S +Q++ ++H F++    H
Sbjct: 664  PQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESH 723

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P    I   L  +       G++PD   V  D+DE+EK  +L  H+EKLAI +GL+ T  
Sbjct: 724  PEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGR 783

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              PIRV+KN R+CSDCH+ AK  S++  REI +RD  RFH FR+G CSC D W
Sbjct: 784  SMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 169/367 (46%), Gaps = 34/367 (9%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
           C ++   K R L   +   A + ++G   N   MV +L+  Y++ G   +A + F     
Sbjct: 237 CVISACAKLRDLDMGERVCAYIGELGLKLNKV-MVNALVDMYMKCGAIDAAKRLFDECVD 295

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R+   +++ L +Y +  G  +E L +  E+  +G       +   +    +L+  + G  
Sbjct: 296 RNLVLYNTILSNY-ARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKV 354

Query: 316 VHASLIKRGFD---------FDVHLKC----------------------ALMNFYGKCRD 344
            H  +I+ G +          D+++KC                      +L   + +  D
Sbjct: 355 CHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGD 414

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           VESA ++F+++ +  + + WN +I   ++   +E+AI+LFREMQ    KA   T++ +  
Sbjct: 415 VESAWEVFNQIPE-RNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIAS 473

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           AC  +GA    K +H Y+ K+ +  ++ +   L+ M++R    + A +VF+ M + ++S+
Sbjct: 474 ACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSA 533

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           W + I +    G  + A  LFN+M    ++PD++ +  +L+     G  +  L +   M+
Sbjct: 534 WTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLME 593

Query: 525 SLGFRPN 531
             G  P 
Sbjct: 594 DHGISPQ 600



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 13/195 (6%)

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           Q+++ D     + ++  L+ C  L  L   K++HC   KNG  +     T L++  ++  
Sbjct: 15  QIKEADPMTKDSCLNESLRCCKTLNQL---KQLHCQITKNGLDQIPSTLTKLVNAGAEIA 71

Query: 753 NLKS------AREVFRKS--ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           + +S      A E+F++   ++  L   N +I G++  G G+EAILL+  +L  G  P+ 
Sbjct: 72  SPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNH 131

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            TF  +L+ C       EG +   S+     +   +   +C++    + G++D       
Sbjct: 132 YTFPFVLSGCTKIAAFCEGIQVHGSV-VKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFE 190

Query: 865 TMPFKPDATIWGALL 879
            M  + +   W +L+
Sbjct: 191 GMSER-NVVSWTSLI 204


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 933

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 285/899 (31%), Positives = 455/899 (50%), Gaps = 81/899 (9%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY--ESF 271
            HA + K G + +   +   LI  Y +  +F  A K            WS+ +  Y     
Sbjct: 79   HAHITKSG-LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGL 137

Query: 272  GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
            GG     L  + E+H  GV       + +LK C+ +    +G +VH  ++  GF+ DV +
Sbjct: 138  GGGA---LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
               L+  Y KC +   + +LF E+ +  + + WN +    ++ +    A+ LF EM  S 
Sbjct: 195  ANTLVVMYAKCDEFLDSKRLFDEIPE-RNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSG 253

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
             K    ++  M+ AC  +     GK IHGY++K   + +    N L+ MY++        
Sbjct: 254  IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAK-------- 305

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
                                   +G +  A S+F K+     QPDI++WN +++G   H 
Sbjct: 306  -----------------------VGDLADAISVFEKIK----QPDIVSWNAVIAGCVLHE 338

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
             ++  L LL  M+  G  PN  ++S  L+A   + L + GR+ H  +++  ++ DL+V  
Sbjct: 339  HHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSV 398

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI-- 629
             L+DMY K D L++A+  F+ +  ++++AWN++ISGY      + A  +  +M +E I  
Sbjct: 399  GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGF 458

Query: 630  ---------------------------------KPDLVSWNSLVSGYSIWGQSKEALVII 656
                                               D+   NSL+  Y      ++A  I 
Sbjct: 459  NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 518

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
                      ++V++TS+I+   Q     E+LK F++MQ  ++KP+    SSLL  C  L
Sbjct: 519  EECT----IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 574

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
               + GK++H   LK GF+ D +    L++MY+K G++  A   F +   + + SW+ MI
Sbjct: 575  SAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMI 634

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G A +G+G++A+ LF+++L+ G  P+ IT  ++L AC ++GLV E   YF+SM   +  
Sbjct: 635  GGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGF 694

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P  EHY+CM+DLLG+AG ++EA + +  MPF+ +A++WGALLG+ RIH  +E    A+ 
Sbjct: 695  KPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAE 754

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             LF LEP  S  + L+ N+ A + +WE+V  +R  M +  VK     SWI++   V+ F 
Sbjct: 755  MLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFL 814

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
                 H  + EIY +L  L   M K GYVP       D+++ EK  +L  H+EKLA+ +G
Sbjct: 815  VGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFG 874

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+ T   APIRV KN RVC DCHTA KY+  +  REI +RD  RFHHF++G CSC D W
Sbjct: 875  LIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/620 (28%), Positives = 296/620 (47%), Gaps = 71/620 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  C    +   G+++HA + K G   D  ++  L+N Y KCR+   A KL  E S  E
Sbjct: 62  LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESS--E 119

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            DL+ W+ +I    +N     A+  F EM     K    T   +L+AC+ V     GKQ+
Sbjct: 120 PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV 179

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           HG V+ S  E ++ V N L+ MY++ ++   + R+FD + + N+ SWN++ S Y  + + 
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFC 239

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
             A  LF                           Y+ VL+        G +PN  S+S +
Sbjct: 240 GEAVGLF---------------------------YEMVLS--------GIKPNEFSLSSM 264

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           + A T LR    G+  HGY+++ G D+D +   +L+DMY K   L +A  VF+ +K  +I
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDI 324

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEAL 653
           V+WN++I+G         A ++L QM+   I P++ + +S +      G    G+   + 
Sbjct: 325 VSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSS 384

Query: 654 VIIHHMKNS------------------------GIYP--NVVTWTSLISGSLQNENYRES 687
           ++   M++                          + P  +++ W ++ISG  Q     E+
Sbjct: 385 LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEA 444

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           L  F++M +E I  N TT+S++L++  GL ++   +++H L +K+GF  D YV   LID 
Sbjct: 445 LSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDS 504

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           Y K  +++ A  +F +     L S+  MI  +A YG G+EA+ LF E+ +   +PD    
Sbjct: 505 YGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVC 564

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
           ++LL AC N    E+G K        Y  +  I   + +V++  K G +D+A      + 
Sbjct: 565 SSLLNACANLSAFEQG-KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT 623

Query: 868 FKPDATIWGALLGSCRIHGH 887
            +   + W A++G    HGH
Sbjct: 624 ERGIVS-WSAMIGGLAQHGH 642



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 244/555 (43%), Gaps = 117/555 (21%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           K+L  C    +   G QIH ++ KS L  + S+ N LI++YS+      A ++ D   + 
Sbjct: 61  KLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEP 120

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           +L SW+++IS Y   G    A   F++M+                               
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMH------------------------------- 149

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
                LG + N  + S VL+A + ++ L+ G++ HG ++ +G + D++V  +L+ MY K 
Sbjct: 150 ----LLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--------- 631
           D   +++ +FD +  RN+V+WN+L S Y        A  +  +M    IKP         
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265

Query: 632 --------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
                                     D  S N+LV  Y+  G   +A+ +   +K     
Sbjct: 266 NACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ---- 321

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P++V+W ++I+G + +E++ ++L+   QM++  I PN  T+SS L+ C G+GL + G+++
Sbjct: 322 PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQL 381

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
           H   +K     D +V+ GL+DMYSK   L+ AR  F     K L +WN +I G++ Y   
Sbjct: 382 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 441

Query: 786 KEAILLFHEL-----------------------------------LETGFQPDAITFTAL 810
            EA+ LF E+                                   +++GF  D     +L
Sbjct: 442 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL 501

Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF---IRTMP 867
           + +      VE+  + F+  +     I  +  ++ M+    + G  +EA      ++ M 
Sbjct: 502 IDSYGKCSHVEDAERIFEECT-----IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 556

Query: 868 FKPDATIWGALLGSC 882
            KPD  +  +LL +C
Sbjct: 557 LKPDRFVCSSLLNAC 571



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 178/386 (46%), Gaps = 39/386 (10%)

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
           F P   S S +L      + L+ G + H +I ++GL  D  +   L+++Y K      A+
Sbjct: 52  FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYAR 111

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-- 645
           ++ D     ++V+W++LISGY   GL   A    ++M    +K +  +++S++   SI  
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171

Query: 646 ---WGQSKEALVIIHHMKNSGIYPN--------------------------VVTWTSLIS 676
               G+    +V++   +      N                          VV+W +L S
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
             +Q +   E++  F +M    IKPN  ++SS++  C GL     GK IH   +K G+  
Sbjct: 232 CYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
           D + A  L+DMY+K G+L  A  VF K     + SWN +I G  ++ + ++A+ L  ++ 
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEGWKYFDS---MSTDYNIIPTIEHYSCMVDLLGKA 853
            +G  P+  T ++ L AC   GL E G +   S   M  + ++  ++     +VD+  K 
Sbjct: 352 RSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG----LVDMYSKC 407

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALL 879
             L++A      +P K D   W A++
Sbjct: 408 DLLEDARMAFNLLPEK-DLIAWNAII 432


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 989

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 277/897 (30%), Positives = 458/897 (51%), Gaps = 77/897 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            HA++I  G   +S  +   LI  Y + G    A   F   F +    W + +      G 
Sbjct: 135  HAKIIHHG-FGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGR 193

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
            E + +L ++ ++H   VI    + + +L  CTK+  F LG ++H  ++K G   +  +  
Sbjct: 194  EDEAIL-LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCN 252

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            AL+  Y +  ++ +A ++FS++    D + +N +I    +    + A++LF +MQ    K
Sbjct: 253  ALVTLYSRWGNLIAAEQIFSKMHR-RDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMK 311

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                T+  +L ACA VGA ++GKQ+H YV+K  + S+L +   L+ +Y +   +E A   
Sbjct: 312  PDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEY 371

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F + +  N+  WN M+          VA+     ++ S        W             
Sbjct: 372  FLTTETENVVLWNVML----------VAYGQLGNLSESY-------W------------- 401

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
                 +   MQ  G  PN  +   +L+  T L  L  G + H  ++++G  +++YV + L
Sbjct: 402  -----IFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVL 456

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            +DMY K+  L  A+ +   ++  ++V+W ++I+GY    LF  A K+  +ME + I+ D 
Sbjct: 457  IDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDN 516

Query: 634  VSW-----------------------------------NSLVSGYSIWGQSKEALVIIHH 658
            + +                                   N+LVS Y+  G++++A +    
Sbjct: 517  IGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEK 576

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            +       + ++W +LISG  Q+ +  E+L+ F QM Q  ++ N  T  S +        
Sbjct: 577  IDAK----DNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTAN 632

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            ++ GK+IH + +K G+  +   +  LI +YSK G+++ A+  F +   K + SWN MI G
Sbjct: 633  IKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITG 692

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            ++ +G G EA+ LF E+ + G  P+ +TF  +L+AC + GLV EG  YF SMS ++ ++P
Sbjct: 693  YSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVP 752

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
              EHY C+VDLLG+A  L  A +FI  MP +PDA IW  LL +C +H ++E  E A+R L
Sbjct: 753  KPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHL 812

Query: 899  FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
             +LEP +SA Y L+ N+ A+S +W+  +R R  M + GVK     SWI++   +H F   
Sbjct: 813  LELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVG 872

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
               HP   +IY  +  L     ++GYV D   +  D+++E+K      H+EKLA+ +GL+
Sbjct: 873  DRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLL 932

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               +  PIRVIKN RVC+DCH   K++S +  R I +RD  RFHHF  G CSC D W
Sbjct: 933  SLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  233 bits (593), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 181/718 (25%), Positives = 329/718 (45%), Gaps = 82/718 (11%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L   K  HA++ K G  ++ +D++ S LI  YL  G+  +A K F    S + + W+  +
Sbjct: 26  LLDAKKLHARIFKSG--FDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVI 83

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA-FWLGVEVHASLIKRG 324
               +      ++L ++  +  + V         +L+ C+   A F +  ++HA +I  G
Sbjct: 84  SGLLA-KKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHG 142

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F     +   L++ Y K   V+ A  +F  +  L+D + W  +I    +N + + AI LF
Sbjct: 143 FGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF-LKDSVSWVAMISGLSQNGREDEAILLF 201

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            +M  S+          +L AC K+  F  G+Q+HG+++K  L S   VCN L+++YSR 
Sbjct: 202 CQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRW 261

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             L  A ++F  M   +  S+NS+IS     G+ D A  LF KM    ++PD +T   LL
Sbjct: 262 GNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLL 321

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           S   + G+              G++                     G++ H Y+++ G+ 
Sbjct: 322 SACASVGA--------------GYK---------------------GKQLHSYVIKMGMS 346

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            DL +  SL+D+YVK   ++ A E F   +  N+V WN ++  Y   G    +  +  QM
Sbjct: 347 SDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQM 406

Query: 625 EEEEIKPDLVSWNS-----------------------------------LVSGYSIWGQS 649
           + E + P+  ++ S                                   L+  Y+  G+ 
Sbjct: 407 QIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGEL 466

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
             A  I+  ++      +VV+WT++I+G  Q++ + E+LK F +M+ + I+ ++   SS 
Sbjct: 467 DTARGILQRLREE----DVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSA 522

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           +  C G+  L  G++IH     +G+ +D  +   L+ +Y++ G  + A   F K   K  
Sbjct: 523 ISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDN 582

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS 829
            SWN +I GFA  G+ +EA+ +F ++ + G + +  TF + ++A  N+  +++G K   +
Sbjct: 583 ISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQG-KQIHA 641

Query: 830 MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           M          E  + ++ L  K G +++A      MP K +   W A++     HG+
Sbjct: 642 MMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEK-NVVSWNAMITGYSQHGY 698



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 174/614 (28%), Positives = 281/614 (45%), Gaps = 80/614 (13%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA + K GFD +  L   L++ Y    +V++A KLF ++    +   WN++I   L  
Sbjct: 31  KLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPS-SNVSFWNKVISGLLAK 89

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESNLSV 433
           +     + LF  M   +      T   +L+AC+   A F   +QIH  ++     S+  V
Sbjct: 90  KLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLV 149

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
           CN LI +YS+N  ++LA  VF+ +   +  SW +MIS  +  G  D A  LF +M+ S +
Sbjct: 150 CNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAV 209

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            P    +                                   S VL A T++ L K G +
Sbjct: 210 IPTPYVF-----------------------------------SSVLSACTKIELFKLGEQ 234

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG+I++ GL  + +V  +L+ +Y +   L  A+++F  M  R+ +++NSLISG   +G 
Sbjct: 235 LHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF 294

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALVIIHHMKNSGIY--- 665
              A ++  +M+ + +KPD V+  SL+S     G    G+   + VI   M +  I    
Sbjct: 295 SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGS 354

Query: 666 -----------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                                   NVV W  ++    Q  N  ES   F+QMQ E + PN
Sbjct: 355 LLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPN 414

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
             T  S+L+TC  LG L  G++IH   +K+GF  + YV + LIDMY+K G L +AR + +
Sbjct: 415 QYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474

Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
           +   + + SW  MI G+  +    EA+ LF E+   G + D I F++ ++AC     + +
Sbjct: 475 RLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQ 534

Query: 823 GWK-----YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
           G +     Y    S D +I       + +V L  + G   +A+     +  K D   W A
Sbjct: 535 GQQIHAQSYISGYSEDLSI------GNALVSLYARCGRAQDAYLAFEKIDAK-DNISWNA 587

Query: 878 LLGSCRIHGHLEYA 891
           L+      GH E A
Sbjct: 588 LISGFAQSGHCEEA 601



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 123/539 (22%), Positives = 227/539 (42%), Gaps = 85/539 (15%)

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+    +A  +T + + + C   G+  + K++H  + KS  +    + + LI +Y  + +
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ A ++FD +   N+S WN +IS             LF+ M +  + PD          
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPD---------- 110

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                ++ +VL    G    G  P                  +   + H  I+ +G    
Sbjct: 111 ---ESTFASVLRACSG----GKAP-----------------FQVTEQIHAKIIHHGFGSS 146

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
             V   L+D+Y KN  +  A+ VF+ +  ++ V+W ++ISG    G    A  +  QM +
Sbjct: 147 PLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHK 206

Query: 627 EEIKPD--------------------------LVSW---------NSLVSGYSIWGQSKE 651
             + P                           +V W         N+LV+ YS WG    
Sbjct: 207 SAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIA 266

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           A  I   M       + +++ SLISG  Q      +L+ F +MQ + +KP+  T++SLL 
Sbjct: 267 AEQIFSKMHRR----DRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLS 322

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
            C  +G    GK++H   +K G   D  +   L+D+Y K  ++++A E F  +  + +  
Sbjct: 323 ACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVL 382

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM- 830
           WN M++ +   GN  E+  +F ++   G  P+  T+ ++L  C + G ++ G +    + 
Sbjct: 383 WNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVI 442

Query: 831 --STDYNIIPTIEHYSC--MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
                +N+      Y C  ++D+  K G LD A   ++ +  + D   W A++     H
Sbjct: 443 KSGFQFNV------YVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 1/198 (0%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M++  I+ N  T   L + C   G L + K++H    K+GF  +  + + LID+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           + +A ++F    +  ++ WN +I G        + + LF  ++     PD  TF ++L A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
           C       +  +   +    +    +    + ++DL  K G++D A   +    F  D+ 
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLA-KLVFERLFLKDSV 179

Query: 874 IWGALLGSCRIHGHLEYA 891
            W A++     +G  + A
Sbjct: 180 SWVAMISGLSQNGREDEA 197


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa
            Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 278/893 (31%), Positives = 457/893 (51%), Gaps = 73/893 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            HA ++K G + +       LI  Y +      A + F       +  WSS +  Y S  G
Sbjct: 27   HASLLKSGSLAS---FRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAY-SNNG 82

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              +  ++ +  +  +GV      L ++LK         LG +VHA  +  GF  DV +  
Sbjct: 83   LPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVFVAN 139

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            AL+  YG    ++ A ++F+E     + + WN ++   ++N++  +AI++F EM +S  +
Sbjct: 140  ALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                    ++ AC        G+Q+H  V++   + ++   N L+ MY +          
Sbjct: 200  PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK---------- 249

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
                                 +G VD+A  +F KM  S    D+++WN L+SG   +G  
Sbjct: 250  ---------------------MGRVDIASVIFEKMPDS----DVVSWNALISGCVLNGHD 284

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
               + LL  M+  G  PN  ++S +L+A +       GR+ HG++++   D D Y+G  L
Sbjct: 285  HRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            +DMY KN  L +A++VFD M +R+++  N+LISG    G    A  +  ++ +E +  + 
Sbjct: 345  VDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNR 404

Query: 634  VSWNSLV-SGYSIWGQS----------KEALVIIHHMKNSGI------------------ 664
             +  +++ S  S+   S          K   +   H+ N  I                  
Sbjct: 405  TTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEE 464

Query: 665  --YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                +++  TS+I+   Q ++   ++K F++M ++ ++P+   +SSLL  C  L   + G
Sbjct: 465  CSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            K++H   +K  F+ DA+    L+  Y+K G+++ A   F     + + SW+ MI G A +
Sbjct: 525  KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQH 584

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G+GK A+ LF  +++ G  P+ IT T++L AC ++GLV+E  +YF+SM   + I  T EH
Sbjct: 585  GHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEH 644

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            YSCM+DLLG+AG LD+A + + +MPF+ +A+IWGALLG+ R+H   E  ++A+ +LF LE
Sbjct: 645  YSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILE 704

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P  S  + L+ N  A +  W +V ++R  M +  +K     SWI++   VH F      H
Sbjct: 705  PEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSH 764

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P T EIY +L  L   M K G+VP+      D+D  EK  +L  H+E+LA+ + L+ T  
Sbjct: 765  PMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPP 824

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             APIRV KN R+C DCH A K++S +  REI +RD  RFHHFR+G CSC D W
Sbjct: 825  GAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic-like [Glycine max]
          Length = 820

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 274/815 (33%), Positives = 436/815 (53%), Gaps = 74/815 (9%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            +++LK C +     LG  +H  LI  G   D  L  +L+  Y KC D E+A  +F  +  
Sbjct: 43   SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102

Query: 358  LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAI---SRTIVKMLQACAKVGAFH 413
             + DL+ W+ II     N     A+  F  M   S   I         +L++C+    F 
Sbjct: 103  HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162

Query: 414  EGKQIHGYVLKSA-LESNLSVCNCLISMYSRNN-KLELATRVFDSMKDHNLSSWNSMISS 471
             G  I  ++LK+   +S++ V   LI M+++    ++ A  VFD M+  NL +W  MI+ 
Sbjct: 163  TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            Y+ LG +D A  LF ++  S   PD  T   LLS                          
Sbjct: 223  YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLS-------------------------- 256

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
                     A  EL     G++ H +++R+GL  D++VG +L+DMY K+  ++N++++F+
Sbjct: 257  ---------ACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFN 307

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---------- 641
             M + N+++W +LISGY        A K+   M    + P+  +++S++           
Sbjct: 308  TMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGI 367

Query: 642  GYSIWGQS-KEALVIIHHMKNSGI--------------------YPNVVTWTSLISGSLQ 680
            G  + GQ+ K  L  I+ + NS I                      N++++ +    + +
Sbjct: 368  GKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAK 427

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
              +  ES  F  +++   +  +  T + LL     +G +  G++IH L +K+GF  +  +
Sbjct: 428  ALDSDES--FNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCI 485

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
               LI MYSK GN ++A +VF     + + +W  +I GFA +G   +A+ LF+E+LE G 
Sbjct: 486  NNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGV 545

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ +T+ A+L+AC + GL++E WK+F+SM  +++I P +EHY+CMVDLLG++G L EA 
Sbjct: 546  KPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAI 605

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            +FI +MPF  DA +W   LGSCR+H + +  E A++++ + EP + A Y L+ NL A   
Sbjct: 606  EFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEG 665

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RW+DV  LR SM +  +     +SWI++D  VH F      HP   +IY EL  L  ++K
Sbjct: 666  RWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIK 725

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
             LGY+P+T  V  D+++E+K + L  H+EK+A+ Y L+ T    PIRV KN RVC DCHT
Sbjct: 726  NLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHT 785

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            A KY+S+V GREI +RD  RFHH ++G+CSCND W
Sbjct: 786  AIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 204/436 (46%), Gaps = 42/436 (9%)

Query: 242 DFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIIL 301
           D  SA   F     ++   W+  +  Y   G  + + ++++  L           LT +L
Sbjct: 197 DIQSARMVFDKMQHKNLVTWTLMITRYSQLG-LLDDAVDLFCRLLVSEYTPDKFTLTSLL 255

Query: 302 KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
             C +L  F LG ++H+ +I+ G   DV + C L++ Y K   VE++ K+F+ +  L  +
Sbjct: 256 SACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM--LHHN 313

Query: 362 LL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
           ++ W  +I   +++ + + AIKLF  M          T   +L+ACA +  F  GKQ+HG
Sbjct: 314 VMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
             +K  L +   V N LI+MY+R+  +E A + F+ + + NL S+N+  ++      +D 
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNT--AADANAKALDS 431

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
             S  +++  + +     T+ CLLSG    G      T+++G Q                
Sbjct: 432 DESFNHEVEHTGVGASPFTYACLLSGAACIG------TIVKGEQ---------------- 469

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
                         H  I+++G   +L +  +L+ MY K    + A +VF++M  RN++ 
Sbjct: 470 -------------IHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVIT 516

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           W S+ISG+   G    A ++  +M E  +KP+ V++ +++S  S  G   EA    + M 
Sbjct: 517 WTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMH 576

Query: 661 -NSGIYPNVVTWTSLI 675
            N  I P +  +  ++
Sbjct: 577 YNHSISPRMEHYACMV 592



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 21/270 (7%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS------- 263
           K  H Q IK+G +   + +  SLI  Y   G    A KAF + F ++   +++       
Sbjct: 369 KQLHGQTIKLG-LSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAK 427

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            L+  ESF  EV+            GV         +L     +     G ++HA ++K 
Sbjct: 428 ALDSDESFNHEVEH----------TGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKS 477

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           GF  ++ +  AL++ Y KC + E+A ++F+++    + + W  II    ++     A++L
Sbjct: 478 GFGTNLCINNALISMYSKCGNKEAALQVFNDMG-YRNVITWTSIISGFAKHGFATKALEL 536

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYS 442
           F EM     K    T + +L AC+ VG   E  K  +      ++   +    C++ +  
Sbjct: 537 FYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLG 596

Query: 443 RNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           R+  L  A    +SM  D +   W + + S
Sbjct: 597 RSGLLLEAIEFINSMPFDADALVWRTFLGS 626


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 848

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 283/809 (34%), Positives = 438/809 (54%), Gaps = 83/809 (10%)

Query: 304  CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
            CTK +   L   +HA L+  G      +   L+N Y    DV  +   F ++   +D   
Sbjct: 86   CTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQR-KDVYT 141

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
            WN +I   +RN  +  AI  F ++   +  +A   T   +L+AC  +    +G++IH +V
Sbjct: 142  WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV---DGRKIHCWV 198

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
             K   + ++ V   LI MYSR                                G+V +A 
Sbjct: 199  FKLGFQWDVFVAASLIHMYSR-------------------------------FGFVGIAR 227

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            SLF+ M       D+ +WN ++SG   +G+    L +L  M+  G   +  +V+ +L   
Sbjct: 228  SLFDDMPFR----DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVC 283

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             +L  +      H Y++++GL+++L+V  +L++MY K   L +AQ+VF  M  R++V+WN
Sbjct: 284  AQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWN 343

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK------------ 650
            S+I+ Y      V A+    +M+   ++PDL++   LVS  SI  QS+            
Sbjct: 344  SIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT---LVSLASIAAQSRDYKNSRSVHGFI 400

Query: 651  -------EALVI----------------IHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                   EA+VI                 H + N     +VV+W +LISG  QN    E+
Sbjct: 401  MRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEA 460

Query: 688  LKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            ++ +  M++  +IK N  T  S+L     +G LQ G  IH   +K     D +V T LID
Sbjct: 461  IEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLID 520

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            +Y K G L  A  +F +   ++   WN +I    I+G+G++A+ LF E+ + G +PD +T
Sbjct: 521  LYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVT 580

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F +LL+AC +SGLV+EG K+F  +  +Y I P+++HY CMVDLLG+AG+L+ A+DFI+ M
Sbjct: 581  FISLLSACSHSGLVDEG-KWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDM 639

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            P  PDA+IWGALLG+CRIHG++E  + AS RLF+++  N   Y L+ N+ A   +WE V+
Sbjct: 640  PLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVD 699

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            ++R    E G+K    WS I++++ V +F      HP   EIY EL  L ++MK LGY+P
Sbjct: 700  KVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIP 759

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            D   V QD++E+EK  +L SH+E+LAI +G++ T  ++ IR+ KN RVC DCH A K++S
Sbjct: 760  DYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFIS 819

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +  REI +RD  RFHHF+ G CSC D W
Sbjct: 820  RITEREIVVRDSKRFHHFKNGICSCGDYW 848



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 274/611 (44%), Gaps = 80/611 (13%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  HA ++  GKI  S+ +   L+  Y   GD + +   F     +    W+S +  Y  
Sbjct: 93  KRLHALLVVSGKI-QSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
             G  +E ++ + +L      F++   T   +LK C  L+    G ++H  + K GF +D
Sbjct: 152 -NGHFREAIDCFYQLL-LVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWD 206

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V +  +L++ Y +   V  A  LF ++    D   WN +I   ++N     A+ +  EM+
Sbjct: 207 VFVAASLIHMYSRFGFVGIARSLFDDMP-FRDMGSWNAMISGLIQNGNAAQALDVLDEMR 265

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                  S T+  +L  CA++G       IH YV+K  LE  L V N LI+MY++   L 
Sbjct: 266 LEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLG 325

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A +VF  M   ++ SWNS+I++Y        A   F KM  + ++PD++T   L S   
Sbjct: 326 DAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLAS--- 382

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDL 567
                                              + R  K  R  HG+I+R G L   +
Sbjct: 383 --------------------------------IAAQSRDYKNSRSVHGFIMRRGWLMEAV 410

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE- 626
            +G ++MDMY K   + +A +VF+ +  +++V+WN+LISGY   GL   A ++   MEE 
Sbjct: 411 VIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEEC 470

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV------------------ 668
            EIK +  +W S+++ Y+  G  ++ + I  H+  + ++ +V                  
Sbjct: 471 REIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVD 530

Query: 669 -------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                        V W ++IS    + +  ++LK F +MQ E +KP+  T  SLL  C  
Sbjct: 531 AMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSH 590

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSAREVFRKSANKTLAS-WN 773
            GL+  GK    L  + G IK +    G ++D+  ++G L+ A +  +       AS W 
Sbjct: 591 SGLVDEGKWFFHLMQEYG-IKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWG 649

Query: 774 CMIMGFAIYGN 784
            ++    I+GN
Sbjct: 650 ALLGACRIHGN 660



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 13/187 (6%)

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           ++  K      +SL  +C    L    K +H L + +G I+  +++  L+++Y+  G++ 
Sbjct: 69  RQPAKNEEIDFNSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVS 125

Query: 756 SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE-LLETGFQPDAITFTALLAAC 814
            +R  F +   K + +WN MI  +   G+ +EAI  F++ LL T FQ D  TF  +L AC
Sbjct: 126 LSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC 185

Query: 815 KN--SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
           +    G     W +      D  +  ++ H      +  + G++  A      MPF+ D 
Sbjct: 186 QTLVDGRKIHCWVFKLGFQWDVFVAASLIH------MYSRFGFVGIARSLFDDMPFR-DM 238

Query: 873 TIWGALL 879
             W A++
Sbjct: 239 GSWNAMI 245


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 278/820 (33%), Positives = 433/820 (52%), Gaps = 83/820 (10%)

Query: 297  LTIILKLCTKLM--------AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            L+ +L+LCT L+          +    VH  +IK G  F V+L   LMN Y K      A
Sbjct: 9    LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHA 68

Query: 349  NKLFSEV------------------SDLE------------DDLLWNEIIMVKLRNEKWE 378
             KLF E+                   D++            D + W  +I+      ++ 
Sbjct: 69   RKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYH 128

Query: 379  NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
             AI++  +M     +    T+  +L + A       GK++H +++K  L  N+SV N L+
Sbjct: 129  KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188

Query: 439  SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            +MY++     +A  VFD M   ++SSWN+MI+ +  +G +D+A + F +M     + DI+
Sbjct: 189  NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM----AERDIV 244

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            TWN ++SG    G     L +   M   SL   P+  +++ VL A   L  L  G++ H 
Sbjct: 245  TWNSMISGFNQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLCIGKQIHS 303

Query: 557  YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
            +I+  G D                                + +  N+LIS Y   G    
Sbjct: 304  HIVTTGFDI-------------------------------SGIVLNALISMYSRCGGVET 332

Query: 617  AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
            A++++ Q   +++K +   + +L+ GY   G   +A  I   +K+     +VV WT++I 
Sbjct: 333  ARRLIEQRGTKDLKIE--GFTALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIV 386

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G  Q+ +Y E++  F  M     +PNS T++++L     L  L +GK+IH   +K+G I 
Sbjct: 387  GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
               V+  LI MY+K+GN+ SA   F      +   SW  MI+  A +G+ +EA+ LF  +
Sbjct: 447  SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
            L  G +PD IT+  + +AC ++GLV +G +YFD M     IIPT+ HY+CMVDL G+AG 
Sbjct: 507  LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L EA +FI  MP +PD   WG+LL +CR+H +++  ++A+ RL  LEP NS  Y+ + NL
Sbjct: 567  LQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANL 626

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             +   +WE+  ++R SM +  VK    +SWI++   VHVF  E   HP   EIY  +  +
Sbjct: 627  YSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
              E+KK+GYVPDT  V  D++EE K ++L  H+EKLAI +GL+ T  +  +R++KN RVC
Sbjct: 687  WDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVC 746

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +DCHTA K++S + GREI +RD  RFHHF++G CSC D W
Sbjct: 747  NDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 236/514 (45%), Gaps = 47/514 (9%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + GD  S  + F     R    W++ +  Y++ G +  + + V G++  +G+      
Sbjct: 90  YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG-QYHKAIRVMGDMVKEGIEPTQFT 148

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC-------------- 342
           LT +L           G +VH+ ++K G   +V +  +L+N Y KC              
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208

Query: 343 -RDVESANKLFS---EVSDLE------------DDLLWNEIIMVKLRNEKWEN--AIKLF 384
            RD+ S N + +   +V  ++            D + WN   M+   N++  +  A+ +F
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS--MISGFNQRGYDLRALDIF 266

Query: 385 REMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
            +M   S  +  R T+  +L ACA +     GKQIH +++ +  + +  V N LISMYSR
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326

Query: 444 NNKLELATRVFD--SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
              +E A R+ +    KD  +  + +++  Y  LG ++ A ++F  +       D++ W 
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWT 382

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
            ++ G+  HGSY   + L R M   G RPN  +++ +L   + L  L +G++ HG  +++
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKM 620
           G  Y + V  +L+ MY K   + +A   FD ++  R+ V+W S+I      G    A ++
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSL 679
              M  E ++PD +++  + S  +  G   +       MK+   I P +  +  ++    
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +    +E+ +F  +M    I+P+  T  SLL  C
Sbjct: 563 RAGLLQEAQEFIEKMP---IEPDVVTWGSLLSAC 593



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 44/284 (15%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y++ GD   A   F     R    W++ +  YE  G    E + ++  + G G  
Sbjct: 352 ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG-SYGEAINLFRSMVGGGQR 410

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S  L  +L + + L +   G ++H S +K G  + V +  AL+  Y K  ++ SA++ 
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +    D + W  +I+   ++   E A++LF  M     +    T V +  AC   G 
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN-----LSSWN 466
            ++G+Q                                    FD MKD +     LS + 
Sbjct: 531 VNQGRQ-----------------------------------YFDMMKDVDKIIPTLSHYA 555

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            M+  +   G +  A     KM    I+PD++TW  LLS    H
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMP---IEPDVVTWGSLLSACRVH 596


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/740 (34%), Positives = 402/740 (54%), Gaps = 75/740 (10%)

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            RN++ + A+ LF  ++ S +     ++  +L+ C  +     GKQ+H   +K     ++S
Sbjct: 69   RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVS 128

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            V   L+ MY +   +E   RVFD M+  N                               
Sbjct: 129  VGTSLVDMYMKTESVEDGERVFDEMRVKN------------------------------- 157

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                +++W  LL+G+  +G  +  L L   MQ  G +PN  + + VL  +     ++ G 
Sbjct: 158  ----VVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGV 213

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H  ++++GLD  ++VG S+++MY K+  + +A+ VFD+M+NRN V+WNS+I+G+   G
Sbjct: 214  QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273

Query: 613  LFVNAKKMLNQMEEEEIKP-----------------------------------DLVSWN 637
            L + A ++  +M  E +K                                    DL    
Sbjct: 274  LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT 333

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            +L+  YS   +  +A  +   M       NVV+WT++ISG +QN     ++  F QM++E
Sbjct: 334  ALMVAYSKCSEIDDAFKLFCMMHG---VQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390

Query: 698  D-IKPNSTTMSSLLQTCGG-LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
            + ++PN  T SS+L  C      ++ GK+ H   +K+GF     V++ L+ MY+K GN++
Sbjct: 391  EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIE 450

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            SA EVF++  ++ L SWN MI G+A +G GK+++ +F E+     + D ITF  +++AC 
Sbjct: 451  SANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACT 510

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            ++GLV EG +YFD M  DY+I+PT+EHYSCMVDL  +AG L++A D I  MPF   ATIW
Sbjct: 511  HAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIW 570

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
              LL +CR+H +++  E+A+ +L  L+P +SA Y L+ N+ A +  W++  ++R  MD  
Sbjct: 571  RTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMK 630

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
             VK    +SWI++      F A    HP +  IY +L  L   +K  GY PDT+ V  D+
Sbjct: 631  KVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDV 690

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            +EE K  +L  H+E+LAI +GL+ T    PI+++KN RVC DCHT  K +S + GR+I +
Sbjct: 691  EEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVV 750

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHF+ G CSC D W
Sbjct: 751  RDSNRFHHFKGGSCSCGDYW 770



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 268/573 (46%), Gaps = 74/573 (12%)

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
           +E L ++  L   G       L+ +LK+C  L    +G +VH   IK GF  DV +  +L
Sbjct: 74  KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
           ++ Y K   VE   ++F E+  +++ + W  ++    +N   E A+KLF +MQ    K  
Sbjct: 134 VDMYMKTESVEDGERVFDEMR-VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPN 192

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
             T   +L   A  GA  +G Q+H  V+KS L+S + V N +++MYS++  +  A  VFD
Sbjct: 193 PFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFD 252

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
           SM++ N  SWNSMI+ +   G    A+ LF +M   R++                     
Sbjct: 253 SMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM---RLE--------------------- 288

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
                      G +   +  + V++    ++ + + ++ H  +++NG D+DL + T+LM 
Sbjct: 289 -----------GVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV 337

Query: 576 MYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE-IKPDL 633
            Y K   + +A ++F  M   +N+V+W ++ISGY   G    A  +  QM  EE ++P+ 
Sbjct: 338 AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNE 397

Query: 634 VSWNSLV----------------------SGYSIWGQSKEALVIIHHMKNS--------- 662
            +++S++                      SG+S       ALV ++  + +         
Sbjct: 398 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 457

Query: 663 -GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
             +  ++V+W S+ISG  Q+   ++SLK F +M+ ++++ +  T   ++  C   GL+  
Sbjct: 458 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNE 517

Query: 722 GKEIHCLCLKNGFIKDAYVA-TGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGF 779
           G+    L +K+  I       + ++D+YS++G L+ A ++  K      A+ W  ++   
Sbjct: 518 GQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAAC 577

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            ++ N +   L   +L+    QP       LL+
Sbjct: 578 RVHLNVQLGELAAEKLIS--LQPQDSAAYVLLS 608


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/746 (34%), Positives = 409/746 (54%), Gaps = 48/746 (6%)

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            +L++ + K   +  A  +F+E+ +  D + W  +++   R  ++  AIK   +M      
Sbjct: 103  SLLSMFAKSGRLADARGVFAEMPE-RDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                T+  +L +CA   A   G+++H +V+K  L S + V N +++MY +    E AT V
Sbjct: 162  PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD--IITWNCLLSGHFTHG 511
            F+ M   ++SSWN+M+S  T LG +D+A SLF  M      PD  I++WN +++G+  +G
Sbjct: 222  FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESM------PDRSIVSWNAMIAGYNQNG 275

Query: 512  SYQNVLTLL-RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                 L L  R +      P+  +++ VL A   L  ++ G++ H YILR  + Y+  V 
Sbjct: 276  LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
                                           N+LIS Y   G   NA+++++Q  E ++ 
Sbjct: 336  -------------------------------NALISTYAKSGSVENARRIMDQSMETDL- 363

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
             +++S+ +L+ GY   G  + A  +   M N     +VV WT++I G  QN    E++  
Sbjct: 364  -NVISFTALLEGYVKIGDMESAREMFGVMNNR----DVVAWTAMIVGYEQNGRNDEAIDL 418

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F  M     +PNS T++++L  C  L  L  GK+IHC  +++   + + V+  +I MY++
Sbjct: 419  FRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYAR 478

Query: 751  SGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            SG+   AR +F +    K   +W  MI+  A +G G+EA+ LF E+L  G +PD IT+  
Sbjct: 479  SGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVG 538

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L+AC ++G V EG +Y+D +  ++ I P + HY+CMVDLL +AG   EA +FIR MP +
Sbjct: 539  VLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVE 598

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            PDA  WG+LL +CR+H + E AE+A+ +L  ++P NS  Y+ + N+ +   RW D  R+ 
Sbjct: 599  PDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIW 658

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
             +  E  V+    +SW  I   +HVF A+   HP    +Y     +  E+K  G+VPD +
Sbjct: 659  KARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQ 718

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V  D+D+E K ++L  H+EKLAI +GL+ T  +  +RV+KN RVC+DCH A K +S V 
Sbjct: 719  SVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVT 778

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
             REI +RD  RFHHFR+G CSC D W
Sbjct: 779  DREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 237/499 (47%), Gaps = 18/499 (3%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN----NKLELATRVFD 455
            ++LQ C        G+ IH   +K+ L ++  +CN L+S Y         L  A R+FD
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 456 S--MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
              +   N+ +WNS++S +   G +  A  +F +M     + D ++W  ++ G    G +
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMP----ERDAVSWTVMVVGLNRAGRF 145

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              +  L  M + GF P   +++ VL +    +    GR+ H ++++ GL   + V  S+
Sbjct: 146 GEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSV 205

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           ++MY K    + A  VF+ M  R++ +WN+++S     G    A+ +   M +  I    
Sbjct: 206 LNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI---- 261

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           VSWN++++GY+  G   +AL +   M   S + P+  T TS++S      N R   +   
Sbjct: 262 VSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHA 321

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
            + + ++  NS   ++L+ T    G ++N + I    ++      ++  T L++ Y K G
Sbjct: 322 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF--TALLEGYVKIG 379

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           +++SARE+F    N+ + +W  MI+G+   G   EAI LF  ++  G +P++ T  A+L+
Sbjct: 380 DMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 439

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            C +   ++ G K     +    +  +    + ++ +  ++G    A      + ++ + 
Sbjct: 440 VCASLACLDYG-KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 498

Query: 873 TIWGALLGSCRIHGHLEYA 891
             W +++ +   HG  E A
Sbjct: 499 ITWTSMIVALAQHGQGEEA 517



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 151/631 (23%), Positives = 269/631 (42%), Gaps = 76/631 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF---LEDYESFGGEVQELLEVWGELHGK 288
           SL+  + + G    A   F     R    W+     L     FG  ++ LL+    +   
Sbjct: 103 SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD----MTAD 158

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G       LT +L  C    A  +G +VH+ ++K G    V +  +++N YGKC D E+A
Sbjct: 159 GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETA 218

Query: 349 NKLFSEVS--------------------DLEDDLL----------WNEIIMVKLRNEKWE 378
             +F  +                     DL + L           WN +I    +N    
Sbjct: 219 TTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDA 278

Query: 379 NAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            A+KLF  M   S+ A    TI  +L ACA +G    GKQ+H Y+L++ +  N  V N L
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338

Query: 438 ISMYSRNNKLELATRVFD-SMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
           IS Y+++  +E A R+ D SM+ D N+ S+ +++  Y  +G ++ A  +F  MN+     
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR---- 394

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D++ W  ++ G+  +G     + L R M + G  PN  +++ VL     L  L YG++ H
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLF 614
              +R+ L+    V  +++ MY ++     A+ +FD +   +  + W S+I      G  
Sbjct: 455 CRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTS 673
             A  +  +M    ++PD +++  ++S  S  G   E       +KN   I P +  +  
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC 574

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           ++    +   + E+ +F  +M    ++P++    SLL  C     +    E+  L  +  
Sbjct: 575 MVDLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSAC----RVHKNAELAELAAEKL 627

Query: 734 FIKD-----AYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-----SWNCMIMGFAIYG 783
              D     AY A  + ++YS  G    A  +++    K +      SW  +     ++G
Sbjct: 628 LSIDPNNSGAYSA--IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFG 685

Query: 784 NG------KEAIL-----LFHELLETGFQPD 803
                   ++A+      ++ E+   GF PD
Sbjct: 686 ADDVVHPQRDAVYAMAARMWEEIKGAGFVPD 716


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 871

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 284/883 (32%), Positives = 461/883 (52%), Gaps = 84/883 (9%)

Query: 231  KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG--EVQELLEVWGELHGK 288
            K +IF+       +  A +    F RS  D ++ L  +   G      +LL V G+    
Sbjct: 35   KDVIFNRASLRTVSDRADSI-TTFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWD-- 91

Query: 289  GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
                  R L  +L+LC    +   G EV   +   GF  D +L   L   Y  C D++ A
Sbjct: 92   ---IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEA 148

Query: 349  NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            +++F +V  +E  L WN ++    ++  +  +I LF++M  S  +  S T   + ++ + 
Sbjct: 149  SRVFDQVK-IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
            + + + G+Q+HGY+LKS      SV N L++ Y +N++                      
Sbjct: 208  LRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHR---------------------- 245

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                     VD A  +F++M     + D+I+WN +++G+ ++G  +  L++   M   G 
Sbjct: 246  ---------VDSARKVFDEMT----ERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGI 292

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
              + +++  V     + RL+  GR  H + ++     +     +L+DMY K   L +A+ 
Sbjct: 293  EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKV 352

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------- 635
            VF  M  R++V++ S+I+GY  +GL   A K+  +MEEE I PD+ +             
Sbjct: 353  VFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRL 412

Query: 636  ---------W-------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                     W             N+L+  Y+  G  +EA ++   M+      ++++W +
Sbjct: 413  LDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR----VKDIISWNT 468

Query: 674  LISGSLQNENYRESLKFF-IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            +I G  +N    E+L  F + + ++   P+  T++ +L  C  L     G+EIH   ++N
Sbjct: 469  VIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G+  D +VA  L+DMY+K G L  AR +F    +K L SW  MI G+ ++G GKEAI LF
Sbjct: 529  GYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALF 588

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            +++ + G +PD I+F +LL AC +SGLV+EGW++F+ M  +  I PT+EHY+C+VD+L +
Sbjct: 589  NQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
             G L +A+ FI  MP  PDATIWGALL  CRIH  ++ AE  + ++F+LEP N+  Y LM
Sbjct: 649  TGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLM 708

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + +WE+V+RLR  + + G++     SWI+I   V++F A  + +P T +I   L
Sbjct: 709  ANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFL 768

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              + + M + GY P T+    D +E EK + L  H+EKLA+  G++ +     IRV KN 
Sbjct: 769  RGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNL 828

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCH  AK+MS +  REI LRD  RFH F++G CSC   W
Sbjct: 829  RVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/822 (32%), Positives = 427/822 (51%), Gaps = 69/822 (8%)

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            +  +GV      L ++LK         LG +VHA  +  GF  DV +  AL+  YG    
Sbjct: 1    MRAEGVCCNEFALPVVLKCVPDAQ---LGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            ++ A ++F E     + + WN ++   ++N++  +AI++F EM +S  +        ++ 
Sbjct: 58   MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
            AC        G+Q+H  V++   E ++   N L+ MY +                     
Sbjct: 118  ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK--------------------- 156

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                      +G VD+A  +F KM  S    D+++WN L+SG   +G     + LL  M+
Sbjct: 157  ----------MGRVDIASVIFEKMPDS----DVVSWNALISGCVLNGHDHRAIELLLQMK 202

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            S G  PN   +S +L+A         GR+ HG++++   D D Y+G  L+DMY KN  L 
Sbjct: 203  SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 262

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV-SGY 643
            +A +VFD M +R+++ WN+LISG    G    A  +   + +E +  +  +  +++ S  
Sbjct: 263  DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 322

Query: 644  SIWGQS----------KEALVIIHHMKNSGI--------------------YPNVVTWTS 673
            S+   S          K   +   H+ N  I                      +++  TS
Sbjct: 323  SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTS 382

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I+   Q ++   ++K F++M ++ ++P+   +SSLL  C  L   + GK++H   +K  
Sbjct: 383  MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 442

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            F+ DA+    L+  Y+K G+++ A   F     + + SW+ MI G A +G+GK A+ LF 
Sbjct: 443  FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 502

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
             +++ G  P+ IT T++L AC ++GLV+E  +YF+SM   + I  T EHYSCM+DLLG+A
Sbjct: 503  RMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRA 562

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G LD+A + + +MPF+ +A++WGALLG+ R+H   E  ++A+ +LF LEP  S  + L+ 
Sbjct: 563  GKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 622

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N  A S  W +V ++R  M +  +K     SW+++   VH F      HP T EIY +L 
Sbjct: 623  NTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLD 682

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L   M K GY+P+      D+D  EK  +L  H+E+LA+ + L+ T   APIRV KN R
Sbjct: 683  ELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLR 742

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +C DCH A K++S +  REI +RD  RFHHFR+G CSC D W
Sbjct: 743  ICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 151/602 (25%), Positives = 267/602 (44%), Gaps = 82/602 (13%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFS-RSYADWSSFLEDYESF 271
           HA  +  G  + SD  V  +L+  Y  FG    A + F    S R+   W+  +  Y   
Sbjct: 30  HAMAMATG--FGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVK- 86

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
             +  + ++V+GE+   G+       + ++  CT       G +VHA +++ G++ DV  
Sbjct: 87  NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT 146

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             AL++ Y K   V+ A+ +F ++ D  D + WN +I   + N     AI+L  +M+ S 
Sbjct: 147 ANALVDMYVKMGRVDIASVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 205

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                  +  +L+ACA  GAF  G+QIHG+++K+  +S+  +   L+ MY++N+ L+ A 
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM 265

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           +VFD M   +L  WN++IS  +  G  D A+S+F                          
Sbjct: 266 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIF-------------------------- 299

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                     G++  G   N ++++ VL++   L      R+ H    + G  +D +V  
Sbjct: 300 ---------YGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVN 350

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC----------------FKGL-- 613
            L+D Y K  CL +A  VF+   + +I+A  S+I+                    KGL  
Sbjct: 351 GLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 410

Query: 614 -------FVNAKKMLNQMEE----------EEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
                   +NA   L+  E+           +   D  + N+LV  Y+  G  ++A +  
Sbjct: 411 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 470

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
             +   G    VV+W+++I G  Q+ + + +L+ F +M  E I PN  TM+S+L  C   
Sbjct: 471 SSLPERG----VVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHA 526

Query: 717 GLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNC 774
           GL+   K   + +    G  +     + +ID+  ++G L  A E+      +  AS W  
Sbjct: 527 GLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGA 586

Query: 775 MI 776
           ++
Sbjct: 587 LL 588



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 146/348 (41%), Gaps = 16/348 (4%)

Query: 158 NRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQM 217
           N H H+   +     S  L P   +      +C  +G   L            +  H  M
Sbjct: 188 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG-----------RQIHGFM 236

Query: 218 IKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQ 276
           IK     +SDD +   L+  Y +      A K F     R    W++ +    S GG   
Sbjct: 237 IKANA--DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC-SHGGRHD 293

Query: 277 ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALM 336
           E   ++  L  +G+      L  +LK    L A     +VHA   K GF FD H+   L+
Sbjct: 294 EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI 353

Query: 337 NFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS 396
           + Y KC  +  A ++F E S   D +    +I    + +  E AIKLF EM     +   
Sbjct: 354 DSYWKCSCLSDAIRVFEECSS-GDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 412

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
             +  +L ACA + A+ +GKQ+H +++K    S+    N L+  Y++   +E A   F S
Sbjct: 413 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 472

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           + +  + SW++MI      G+   A  LF +M    I P+ IT   +L
Sbjct: 473 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 520



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 5/276 (1%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRS 257
           L  T      S+ +  HA   K+G I+++  +V  LI  Y +    + A + F    S  
Sbjct: 318 LKSTASLEAASATRQVHALAEKIGFIFDAH-VVNGLIDSYWKCSCLSDAIRVFEECSSGD 376

Query: 258 YADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
               +S +    S     +  ++++ E+  KG+     +L+ +L  C  L A+  G +VH
Sbjct: 377 IIAVTSMITAL-SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 435

Query: 318 ASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
           A LIKR F  D     AL+  Y KC  +E A   FS + +    + W+ +I    ++   
Sbjct: 436 AHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE-RGVVSWSAMIGGLAQHGHG 494

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNC 436
           + A++LF  M          T+  +L AC   G   E K+    + +   ++      +C
Sbjct: 495 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 554

Query: 437 LISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           +I +  R  KL+ A  + +SM    N S W +++ +
Sbjct: 555 MIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 590


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 260/790 (32%), Positives = 435/790 (55%), Gaps = 53/790 (6%)

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRG---FDFDVHLK------CALMNFYGKCRDVES 347
            L +   LC  L+A++  V V     +     FD   + +       +L++ Y K   +  
Sbjct: 240  LLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPD 299

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A+ +F+E+ D  D + W  +I+   R+ ++ +A+K F +M          T+  +L +CA
Sbjct: 300  AHVVFAEMPD-RDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCA 358

Query: 408  KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
             + A   G+++H +V+K  L S + V N ++ MY +    E A  VF+ M+  ++SSWN 
Sbjct: 359  AMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNV 418

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL-RGMQSL 526
            M+S YT  G +++A S+F  M    ++  I++WN +++G+  +G     L    R + + 
Sbjct: 419  MVSLYTHQGRMELAVSMFENM----VERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSAS 474

Query: 527  GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
               P+  +V+ VL A   LR+LK G++ H YILR G+       + +M            
Sbjct: 475  SMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMP----CSSQIM------------ 518

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
                           N+LIS Y   G    A+++++Q    ++  +++S+ +L+ GY   
Sbjct: 519  ---------------NALISTYAKSGSVETARRIMDQAVVADL--NVISFTALLEGYVKL 561

Query: 647  GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
            G +K+A  I   M N     +V+ WT++I G  QN    E+++ F  M     +PNS T+
Sbjct: 562  GDTKQAREIFDIMNNR----DVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTL 617

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA- 765
            +++L  C  L  L  GK+IHC  +++   +   V+  +I +Y++SG++  AR VF +   
Sbjct: 618  AAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICW 677

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
             K   +W  MI+  A +G G++A++LF E++  G +PD IT+  +L+AC ++G V++G +
Sbjct: 678  RKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKR 737

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            Y++ M  ++ I+P + HY+CMVDL  +AG L EA +FI+ MP  PD  +WG+LL +CR+ 
Sbjct: 738  YYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVR 797

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
             + + AE+A+ +L  ++P NS  Y+ + N+ +   RW D  R+     + GVK    +SW
Sbjct: 798  KNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSW 857

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
              +   VHVF A+   HP    IY +   +  E+KK G+VPD   V  D+D+E K ++L 
Sbjct: 858  THVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLS 917

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+EKLAI +GL+ T  +  +R++KN RVC+DCHTA K++S    REI +RD  RFHHFR
Sbjct: 918  RHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFR 977

Query: 1066 EGECSCNDCW 1075
            +G CSC D W
Sbjct: 978  DGYCSCKDYW 987



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 147/628 (23%), Positives = 270/628 (42%), Gaps = 70/628 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G    A   F     R    W+  +       G   + ++ + ++  +G  
Sbjct: 286 SLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNR-SGRFWDAVKTFLDMVSEGFA 344

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                LT +L  C  + A  +G +VH  ++K G    V +  +++  YGKC D E+A  +
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404

Query: 352 FSE-------------------------VSDLED-----DLLWNEIIMVKLRNEKWENAI 381
           F                           VS  E+      + WN II    +N     A+
Sbjct: 405 FERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMAL 464

Query: 382 KLF-REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           K F R +  SS +  + T+  +L ACA +     GKQ+H Y+L++ +  +  + N LIS 
Sbjct: 465 KFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALIST 524

Query: 441 YSRNNKLELATRVFDS--MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           Y+++  +E A R+ D   + D N+ S+ +++  Y  LG    A  +F+ MN+     D+I
Sbjct: 525 YAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR----DVI 580

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            W  ++ G+  +G     + L R M  +G  PN  +++ VL A   L  L YG++ H   
Sbjct: 581 AWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKA 640

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNA 617
           +R+  +  + V  +++ +Y ++  +  A+ VFD +   +  + W S+I      GL   A
Sbjct: 641 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQA 700

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLIS 676
             +  +M    +KPD +++  ++S  +  G   +       M+N  GI P +  +  ++ 
Sbjct: 701 VVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVD 760

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC-----GGLGLLQNGKEIHCLCLK 731
              +     E+ +F   +Q+  + P++    SLL  C       L  L  GK +      
Sbjct: 761 LHARAGLLTEAHEF---IQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHN 817

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-----SWNCMIMGFAIYGNG- 785
           +G    AY A  L ++YS  G    A  +++   +K +      SW  +     ++G   
Sbjct: 818 SG----AYSA--LANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADD 871

Query: 786 ----------KEAILLFHELLETGFQPD 803
                     ++A  ++ E+ + GF PD
Sbjct: 872 VLHPQRDSIYRKAAEMWEEIKKAGFVPD 899



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 206/432 (47%), Gaps = 21/432 (4%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS----RNNKLELATRVFDS 456
           ++LQ C        G+ IH + +K+ L  +  +CN L++ Y+           A  +FD 
Sbjct: 214 RLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDD 273

Query: 457 MK--DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           +     N  +WNS++S Y   G +  A  +F +M       D ++W  ++ G    G + 
Sbjct: 274 IPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDR----DAVSWTIMIVGLNRSGRFW 329

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
           + +     M S GF P+  +++ VL +   +     GR+ H ++++ GL   + V  S++
Sbjct: 330 DAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVL 389

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            MY K    + A+ VF+ M+ R++ +WN ++S Y  +G    A  M   M E  I    V
Sbjct: 390 YMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----V 445

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           SWN++++GY+  G    AL     M   S + P+  T TS++S        +   +    
Sbjct: 446 SWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSY 505

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKS 751
           + +  +  +S  M++L+ T    G ++  + I    +    + D  V   T L++ Y K 
Sbjct: 506 ILRTGMPCSSQIMNALISTYAKSGSVETARRI----MDQAVVADLNVISFTALLEGYVKL 561

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G+ K ARE+F    N+ + +W  MI+G+   G   EA+ LF  ++  G +P++ T  A+L
Sbjct: 562 GDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVL 621

Query: 812 AACKNSGLVEEG 823
           +AC +   ++ G
Sbjct: 622 SACASLAYLDYG 633


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 766

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/742 (36%), Positives = 416/742 (56%), Gaps = 44/742 (5%)

Query: 340  GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
            G+C   +SA +LF+ +      + WN +I   L N+K+  A +LF +M        +R +
Sbjct: 63   GQC---DSALRLFNSMPR-RSSISWNAMISGCLSNDKFYLARQLFEKMP-------TRDL 111

Query: 400  VK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            V    M+  C +       +     +     E ++   N ++S Y++N  ++ A  +FD 
Sbjct: 112  VSWNVMISGCVRYRNLRAAR----LLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE 167

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M   N  SWN M+++Y   G ++ A  LF     S+   ++I+WNC++ G+      +N 
Sbjct: 168  MPCKNSISWNGMLAAYVQNGRIEDARRLF----ESKADWELISWNCMMGGYVK----RNR 219

Query: 517  LTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            L   RG+   +  R   S  +++        LL+  R      +R     D++  T+++ 
Sbjct: 220  LVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR-----DVFTWTAMVS 274

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--DL 633
             YV+N  L  A+ VFD M  +N V+WN++I+GY      V  K+M    E  E  P  ++
Sbjct: 275  GYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGY------VQCKRMDQARELFEAMPCQNV 328

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
             SWN++++GY+  G   +A      M       + ++W ++I+G  Q+    E+L  F++
Sbjct: 329  SSWNTMITGYAQNGDIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHLFVE 384

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            M+++  + N +T +S L TC  +  L+ GK++H   +K G     YV   L+ MY K GN
Sbjct: 385  MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGN 444

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            +  A  VF     K + SWN MI G+A +G GKEA++LF  + +TG  PD +T   +L+A
Sbjct: 445  IDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSA 504

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C ++GLV++G +YF SM+ DY I    +HY+CM+DLLG+AG LD+A + ++ MPF+PDA 
Sbjct: 505  CSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAA 564

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
             WGALLG+ RIHG+ E  E A++ +F++EP NS  Y L+ NL A S RW DV R+R  M 
Sbjct: 565  TWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMR 624

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            + GVK V  +SW+++   +H F+   + HP    IY  L  L  +MKK GYV  T+ V  
Sbjct: 625  DRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLH 684

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D++EEEK  +L  H+EKLA+ +G++   +  PIRVIKN RVC DCH A K++S + GR I
Sbjct: 685  DVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLI 744

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             LRD  RFHHF  G+CSC D W
Sbjct: 745  ILRDSHRFHHFNGGQCSCGDYW 766



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 109/242 (45%), Gaps = 4/242 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + GD   A   F     R    W++ +  Y    G  +E L ++ E+   G  
Sbjct: 333 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQ-SGYGEEALHLFVEMKRDGER 391

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                 T  L  C ++ A  LG +VH  ++K G +   ++  AL+  Y KC +++ A  +
Sbjct: 392 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + E  + WN +I    R+   + A+ LF  M+ +       T+V +L AC+  G 
Sbjct: 452 FEGIEEKE-VVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510

Query: 412 FHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G +  +       + +N     C+I +  R  +L+ A  +  +M  + + ++W +++
Sbjct: 511 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570

Query: 470 SS 471
            +
Sbjct: 571 GA 572


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Brachypodium distachyon]
          Length = 802

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/746 (34%), Positives = 414/746 (55%), Gaps = 48/746 (6%)

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            +L++ Y K   +  A  +F+E+ +  D + W  +++   R  ++  AIK+F +M      
Sbjct: 101  SLLSLYAKSGRLADARAVFAEMPE-RDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                T+  +L +CA   A   G+++H +V+K  L S + V N +++MY +    E A  V
Sbjct: 160  PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD--IITWNCLLSGHFTHG 511
            F+ M + ++SSWN+M+S    LG +D+A SLF  M      PD  I++WN +++G+  +G
Sbjct: 220  FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENM------PDRTIVSWNAVIAGYNQNG 273

Query: 512  SYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                 L     M S     P+  +++ VL A   L ++  G++ H YILR+ + Y   V 
Sbjct: 274  LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
             +L+ MY K+  ++                               NA+ ++ Q    ++ 
Sbjct: 334  NALISMYAKSGSVE-------------------------------NARGVMQQAVMADL- 361

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
             +++S+ +L+ GY   G  K A  +   M N     +VV WT++I G  QN +  E+++ 
Sbjct: 362  -NVISFTALLEGYVKLGDMKHAREMFDVMSNR----DVVAWTAMIVGYEQNGHNDEAMEL 416

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F  M +   +PNS T++++L  C  L  L+ GK+IHC  +++   + + V+  ++ MY++
Sbjct: 417  FRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYAR 476

Query: 751  SGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            SG+L  AR VF R    K   +W  MI+  A +G G++A+ LF E+L  G +PD ITF  
Sbjct: 477  SGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVG 536

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L+AC + G V+EG +YF  +   + I+P + HY+CMVDLL +AG   EA +FI+ MP +
Sbjct: 537  VLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVE 596

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            PDA  WG+LL +CR+H + + AE+A+ +L  ++P NS  Y+ + N+ +   RW D  ++ 
Sbjct: 597  PDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIW 656

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
                +  VK    +SW  I   VHVF A+   HP    +Y     +  ++KK G+VPD +
Sbjct: 657  KRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQ 716

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V  D+D+E K ++L  H+EKLAI +GL+ T  +  +R++KN RVC+DCHTA K++S V 
Sbjct: 717  SVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVA 776

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
             REI LRD  RFHHF++G CSC D W
Sbjct: 777  DREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 151/628 (24%), Positives = 271/628 (43%), Gaps = 70/628 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G    A   F     R    W+  +      G    E ++++ ++   G+ 
Sbjct: 101 SLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVG-RFGEAIKMFLDMVTDGLS 159

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                LT +L  C    A  +G +VH+ ++K G    V +  +++N YGKC D E+A  +
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219

Query: 352 FSEVS--------------------DLEDDLL----------WNEIIMVKLRNEKWENAI 381
           F  +                     DL   L           WN +I    +N     A+
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKAL 279

Query: 382 KLF-REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
             F R + +S+      TI  +L ACA +G    GKQ+H Y+L+S +     V N LISM
Sbjct: 280 WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISM 339

Query: 441 YSRNNKLELATRVFDS--MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           Y+++  +E A  V     M D N+ S+ +++  Y  LG +  A  +F+ M++     D++
Sbjct: 340 YAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR----DVV 395

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            W  ++ G+  +G     + L R M   G  PN  +V+ VL     L  L+YG++ H   
Sbjct: 396 AWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKA 455

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNA 617
           +R+  +    V  S++ MY ++  L  A+ VFD +   +  V W S+I      GL  +A
Sbjct: 456 IRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDA 515

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLIS 676
             +  +M    +KPD +++  ++S  +  G   E       +++  GI P +  +  ++ 
Sbjct: 516 VGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVD 575

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC-----GGLGLLQNGKEIHCLCLK 731
              +   + E+ +F   +QQ  ++P++    SLL  C       L  L   K +      
Sbjct: 576 LLARAGLFSEAQEF---IQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGN 632

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-----SWNCMIMGFAIYGNG- 785
           +G    AY A  L ++YS  G    A +++++  +K++      SW  +     ++G   
Sbjct: 633 SG----AYSA--LSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADD 686

Query: 786 ----------KEAILLFHELLETGFQPD 803
                     + A  ++ ++ + GF PD
Sbjct: 687 VLHPQRDTVYRTAAKMWDDIKKAGFVPD 714



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/541 (22%), Positives = 235/541 (43%), Gaps = 93/541 (17%)

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY-----SRNN 445
           +A + S    ++LQ C        G+ IH   +K+ L ++  +CN L+S Y         
Sbjct: 18  AAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGG 77

Query: 446 KLELATRVFDSMK--DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
               A R+FD +     N+ +WNS++S Y   G +  A ++F +M     + D ++W  +
Sbjct: 78  GFREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMP----ERDPVSWTVM 133

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           + G    G +   + +   M + G  P   +++ VL +         GR+ H ++++ GL
Sbjct: 134 VVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGL 193

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
              + V  S+++MY K    + A+ VF+ M  R++ +WN+++S     G    A  +   
Sbjct: 194 SSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFEN 253

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M +  I    VSWN++++GY+  G + +AL                 W            
Sbjct: 254 MPDRTI----VSWNAVIAGYNQNGLNAKAL-----------------W------------ 280

Query: 684 YRESLKFFIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
                 FF +M     + P+  T++S+L  C  LG++  GK++H   L++       V  
Sbjct: 281 ------FFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334

Query: 743 GLIDMYSKS---------------------------------GNLKSAREVFRKSANKTL 769
            LI MY+KS                                 G++K ARE+F   +N+ +
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDV 394

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG----WK 825
            +W  MI+G+   G+  EA+ LF  ++ +G +P++ T  A+L+ C +   +E G     K
Sbjct: 395 VAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCK 454

Query: 826 YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
              S+    + +      + +V +  ++G L  A      + ++ +   W +++ +   H
Sbjct: 455 AIRSLQEQSSSVS-----NSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQH 509

Query: 886 G 886
           G
Sbjct: 510 G 510



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/488 (21%), Positives = 200/488 (40%), Gaps = 76/488 (15%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL------------TIILKL 303
           R+   W++ +  Y   G            L+ K + F SR+L            T +L  
Sbjct: 257 RTIVSWNAVIAGYNQNG------------LNAKALWFFSRMLSYSTMAPDEFTITSVLSA 304

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE--VSDL--- 358
           C  L    +G +VHA +++    +   +  AL++ Y K   VE+A  +  +  ++DL   
Sbjct: 305 CANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVI 364

Query: 359 ---------------------------EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
                                       D + W  +I+   +N   + A++LFR M  S 
Sbjct: 365 SFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSG 424

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +  S T+  +L  CA +     GKQIH   ++S  E + SV N +++MY+R+  L  A 
Sbjct: 425 PEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWAR 484

Query: 452 RVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           RVFD +       +W SMI +    G  + A  LF +M    ++PD IT+  +LS     
Sbjct: 485 RVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHV 544

Query: 511 GSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           G         + +Q   G  P  S  + ++  +    L     E+  +I +  ++ D   
Sbjct: 545 GFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFS---EAQEFIQQMPVEPDAIA 601

Query: 570 GTSLMD---MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
             SL+    ++   D  + A E   ++   N  A+++L + Y   G + +A K+  + ++
Sbjct: 602 WGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKD 661

Query: 627 EEIKPDL-VSWNSLVSGYSIWGQS-----------KEALVIIHHMKNSGIYPNVVTWTSL 674
           + +K +   SW  + +   ++G             + A  +   +K +G  P++ +    
Sbjct: 662 KSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHD 721

Query: 675 ISGSLQNE 682
           +   L+ E
Sbjct: 722 VDDELKEE 729


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/744 (34%), Positives = 407/744 (54%), Gaps = 44/744 (5%)

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            +L++ + K   +  A  +F+E+ +  D + W  +++   R  ++  AIK   +M      
Sbjct: 103  SLLSMFAKSGRLADARGVFAEMPE-RDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                T+  +L +CA   A   G+++H +V+K  L S + V N +++MY +    E A+ V
Sbjct: 162  PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F+ M   ++SSWN+M+S  T LG +D+A SLF  M        I++WN +++G+  +G  
Sbjct: 222  FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGR----SIVSWNAMIAGYNQNGLD 277

Query: 514  QNVLTLL-RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
               L L  R +      P+  +++ VL A   L  ++ G++ H YILR  + Y+  V   
Sbjct: 278  AKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT-- 335

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
                                         N+LIS Y   G   NA+++++Q  E ++  +
Sbjct: 336  -----------------------------NALISTYAKSGSVENARRIMDQSMETDL--N 364

Query: 633  LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
            ++S+ +L+ GY   G  + A  +   M N     +VV WT++I G  QN    E++  F 
Sbjct: 365  VISFTALLEGYVKIGDMESAREMFGVMNNR----DVVAWTAMIVGYEQNGRNDEAIDLFR 420

Query: 693  QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
             M     +PNS T++++L  C  L  L  GK+IHC  +++   + + V+  +I MY++SG
Sbjct: 421  SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSG 480

Query: 753  NLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            +   AR +F +    K   +W  MI+  A +G G+EA+ LF E+L  G +PD IT+  +L
Sbjct: 481  SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVL 540

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            +AC ++G V EG +Y+D +  ++ I P + HY+CMVDLL +AG   EA +FIR MP +PD
Sbjct: 541  SACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPD 600

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A  WG+LL +CR+H + E AE+A+ +L  ++P NS  Y+ + N+ +   RW D  R+  +
Sbjct: 601  AIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKA 660

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
              E  V+    +SW  I   +HVF A+   HP    +Y     +  E+K  G+VPD + V
Sbjct: 661  RKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSV 720

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+D+E K ++L  H+EKLAI +GL+ T  +  +RV+KN RVC+DCH A K +S V  R
Sbjct: 721  LHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDR 780

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD  RFHHFR+G CSC D W
Sbjct: 781  EIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 236/499 (47%), Gaps = 18/499 (3%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN----NKLELATRVFD 455
            ++LQ C        G+ IH   +K+ L ++  +CN L+S Y         L  A R+FD
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 456 S--MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
              +   N+ +WNS++S +   G +  A  +F +M     + D ++W  ++ G    G +
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMP----ERDAVSWTVMVVGLNRAGRF 145

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              +  L  M + GF P   +++ VL +    +    GR+ H ++++ GL   + V  S+
Sbjct: 146 GEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSV 205

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           ++MY K    + A  VF+ M  R++ +WN+++S     G    A+ +   M    I    
Sbjct: 206 LNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSI---- 261

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           VSWN++++GY+  G   +AL +   M   S + P+  T TS++S      N R   +   
Sbjct: 262 VSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHA 321

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
            + + ++  NS   ++L+ T    G ++N + I    ++      ++  T L++ Y K G
Sbjct: 322 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF--TALLEGYVKIG 379

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           +++SARE+F    N+ + +W  MI+G+   G   EAI LF  ++  G +P++ T  A+L+
Sbjct: 380 DMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 439

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            C +   ++ G K     +    +  +    + ++ +  ++G    A      + ++ + 
Sbjct: 440 VCASLACLDYG-KQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 498

Query: 873 TIWGALLGSCRIHGHLEYA 891
             W +++ +   HG  E A
Sbjct: 499 ITWTSMIVALAQHGQGEEA 517



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 151/631 (23%), Positives = 270/631 (42%), Gaps = 76/631 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF---LEDYESFGGEVQELLEVWGELHGK 288
           SL+  + + G    A   F     R    W+     L     FG  ++ LL+    +   
Sbjct: 103 SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD----MTAD 158

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G       LT +L  C    A  +G +VH+ ++K G    V +  +++N YGKC D E+A
Sbjct: 159 GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETA 218

Query: 349 NKLFSEVS--------------------DLEDDLL----------WNEIIMVKLRNEKWE 378
           + +F  +                     DL + L           WN +I    +N    
Sbjct: 219 STVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDA 278

Query: 379 NAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            A+KLF  M   S+ A    TI  +L ACA +G    GKQ+H Y+L++ +  N  V N L
Sbjct: 279 KALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNAL 338

Query: 438 ISMYSRNNKLELATRVFD-SMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
           IS Y+++  +E A R+ D SM+ D N+ S+ +++  Y  +G ++ A  +F  MN+     
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR---- 394

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D++ W  ++ G+  +G     + L R M + G  PN  +++ VL     L  L YG++ H
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLF 614
              +R+ L+    V  +++ MY ++     A+ +FD +   +  + W S+I      G  
Sbjct: 455 CRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTS 673
             A  +  +M    ++PD +++  ++S  S  G   E       +KN   I P +  +  
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC 574

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           ++    +   + E+ +F  +M    ++P++    SLL  C     +    E+  L  +  
Sbjct: 575 MVDLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSAC----RVHKNAELAELAAEKL 627

Query: 734 FIKD-----AYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-----SWNCMIMGFAIYG 783
              D     AY A  + ++YS  G    A  +++    K +      SW  +     ++G
Sbjct: 628 LSIDPNNSGAYSA--IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFG 685

Query: 784 NG------KEAIL-----LFHELLETGFQPD 803
                   ++A+      ++ E+   GF PD
Sbjct: 686 ADDVVHPQRDAVYAMAARMWEEIKGAGFVPD 716


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 260/817 (31%), Positives = 421/817 (51%), Gaps = 75/817 (9%)

Query: 294  SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
            SR    + + C  L    LG +V   +I+ G   +++    L+  +  C ++  A + F 
Sbjct: 61   SRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFD 120

Query: 354  EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
             V + +  + WN II    +    + A  LFR+M   + +    T + +L AC+      
Sbjct: 121  SVEN-KTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
             GK+ H  V+K    S+  +   L+SMY +   ++ A +VFD +                
Sbjct: 180  LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGL---------------- 223

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                                + D+ T+N ++ G+   G  +    L   MQ  GF+PN  
Sbjct: 224  -------------------YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRI 264

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            S   +L   +    L +G+  H   +  GL  D+ V T+L+ MY+    ++ A+ VFD M
Sbjct: 265  SFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKM 324

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------------- 636
            K R++V+W  +I GY       +A  +   M+EE I+PD +++                 
Sbjct: 325  KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAR 384

Query: 637  ------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                               +LV  Y+  G  K+A  +   M       +VV+W+++I   
Sbjct: 385  EIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRR----DVVSWSAMIGAY 440

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            ++N    E+ + F  M++ +++P+  T  +LL  CG LG L  G EI+   +K   +   
Sbjct: 441  VENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHI 500

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
             V   LI+M  K G+++ AR +F     + + +WN MI G++++GN +EA+ LF  +L+ 
Sbjct: 501  PVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKE 560

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
             F+P+++TF  +L+AC  +G VEEG ++F  +     I+PT+E Y CMVDLLG+AG LDE
Sbjct: 561  RFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDE 620

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A   I  MP KP+++IW  LL +CRI+G+L+ AE A+ R    EP + A Y  + ++ A 
Sbjct: 621  AELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAA 680

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
            +  WE+V ++R  M+  GV+     +WI+++  +H F  E   HP  GEIY EL  L++ 
Sbjct: 681  AGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTA 740

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            +K+ GY+P T+ V  ++ E+EK + +  H+EKLAI YG++   S APIR+ KN RVC DC
Sbjct: 741  IKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDC 800

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H+A+K++S V GREI  RD +RFHHF+ G CSC D W
Sbjct: 801  HSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837



 Score =  166 bits (420), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 250/556 (44%), Gaps = 48/556 (8%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  HAQ+IK+G +  SD  +  +L+  Y++ G    A + F   + R  + ++  +  Y 
Sbjct: 182 KEFHAQVIKVGFV--SDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G+ ++  +++  +  +G          IL  C+   A   G  VHA  +  G   DV
Sbjct: 240 K-SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV 298

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  AL+  Y  C  +E A ++F ++  + D + W  +I     N   E+A  LF  MQ 
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKMK-VRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              +    T + ++ ACA        ++IH  V+++   ++L V   L+ MY++   ++ 
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VFD+M   ++ SW++MI +Y   G  + A+  F+ M  + ++PD++T+  LL+    
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLN---- 473

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                          A   L  L  G E +   ++  L   + V
Sbjct: 474 -------------------------------ACGHLGALDLGMEIYTQAIKADLVSHIPV 502

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           G +L++M VK+  ++ A+ +F+NM  R++V WN +I GY   G    A  + ++M +E  
Sbjct: 503 GNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERF 562

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
           +P+ V++  ++S  S  G  +E      ++ +  GI P +  +  ++    +     E+ 
Sbjct: 563 RPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAE 622

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
               +M    +KPNS+  S+LL  C   G L   +     CL +    D  V   L  MY
Sbjct: 623 LLINRMP---LKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSE-PYDGAVYVQLSHMY 678

Query: 749 SKSG---NLKSAREVF 761
           + +G   N+   R+V 
Sbjct: 679 AAAGMWENVAKVRKVM 694



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 2/190 (1%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +S T   L Q C  L     GK++    +++G   + Y    LI ++S  GN+  AR+ F
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
               NKT+ +WN +I G+A  G+ KEA  LF ++++   +P  ITF  +L AC +   ++
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            G K F +       +      + +V +  K G +D A      + +K D + +  ++G 
Sbjct: 180 LG-KEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGL-YKRDVSTFNVMIGG 237

Query: 882 CRIHGHLEYA 891
               G  E A
Sbjct: 238 YAKSGDGEKA 247


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/742 (34%), Positives = 405/742 (54%), Gaps = 48/742 (6%)

Query: 338  FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
             + K   +  A  +F+E+ +  D + W  +++   R  ++  AIK   +M          
Sbjct: 1    MFAKSGRLADARGVFAEMPE-RDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 59

Query: 398  TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            T+  +L +CA   A   G+++H +V+K  L S + V N +++MY +    E AT VF+ M
Sbjct: 60   TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD--IITWNCLLSGHFTHGSYQN 515
               ++SSWN+M+S  T LG +D+A SLF  M      PD  I++WN +++G+  +G    
Sbjct: 120  PVRSVSSWNAMVSLNTHLGRMDLAESLFESM------PDRSIVSWNAMIAGYNQNGLDAK 173

Query: 516  VLTLL-RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
             L L  R +      P+  +++ VL A   L  ++ G++ H YILR  + Y+  V     
Sbjct: 174  ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT---- 229

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
                                       N+LIS Y   G   NA+++++Q  E ++  +++
Sbjct: 230  ---------------------------NALISTYAKSGSVENARRIMDQSMETDL--NVI 260

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
            S+ +L+ GY   G  + A  +   M N     +VV WT++I G  QN    E++  F  M
Sbjct: 261  SFTALLEGYVKIGDMESAREMFGVMNNR----DVVAWTAMIVGYEQNGRNDEAIDLFRSM 316

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
                 +PNS T++++L  C  L  L  GK+IHC  +++   + + V+  +I MY++SG+ 
Sbjct: 317  ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 376

Query: 755  KSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
              AR +F +    K   +W  MI+  A +G G+EA+ LF E+L  G +PD IT+  +L+A
Sbjct: 377  PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 436

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C ++G V EG +Y+D +  ++ I P + HY+CMVDLL +AG   EA +FIR MP +PDA 
Sbjct: 437  CSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 496

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
             WG+LL +CR+H + E AE+A+ +L  ++P NS  Y+ + N+ +   RW D  R+  +  
Sbjct: 497  AWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARK 556

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            E  V+    +SW  I   +HVF A+   HP    +Y     +  E+K  G+VPD + V  
Sbjct: 557  EKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLH 616

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D+D+E K ++L  H+EKLAI +GL+ T  +  +RV+KN RVC+DCH A K +S V  REI
Sbjct: 617  DVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREI 676

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD  RFHHFR+G CSC D W
Sbjct: 677  IVRDATRFHHFRDGLCSCKDYW 698



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 149/626 (23%), Positives = 266/626 (42%), Gaps = 76/626 (12%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSF---LEDYESFGGEVQELLEVWGELHGKGVIFR 293
           + + G    A   F     R    W+     L     FG  ++ LL+    +   G    
Sbjct: 2   FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD----MTADGFTPT 57

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
              LT +L  C    A  +G +VH+ ++K G    V +  +++N YGKC D E+A  +F 
Sbjct: 58  QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 117

Query: 354 EVS--------------------DLEDDLL----------WNEIIMVKLRNEKWENAIKL 383
            +                     DL + L           WN +I    +N     A+KL
Sbjct: 118 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 177

Query: 384 FREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           F  M   S+ A    TI  +L ACA +G    GKQ+H Y+L++ +  N  V N LIS Y+
Sbjct: 178 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 237

Query: 443 RNNKLELATRVFD-SMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           ++  +E A R+ D SM+ D N+ S+ +++  Y  +G ++ A  +F  MN+     D++ W
Sbjct: 238 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR----DVVAW 293

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
             ++ G+  +G     + L R M + G  PN  +++ VL     L  L YG++ H   +R
Sbjct: 294 TAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIR 353

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKK 619
           + L+    V  +++ MY ++     A+ +FD +   +  + W S+I      G    A  
Sbjct: 354 SLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVG 413

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGS 678
           +  +M    ++PD +++  ++S  S  G   E       +KN   I P +  +  ++   
Sbjct: 414 LFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLL 473

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD- 737
            +   + E+ +F  +M    ++P++    SLL  C     +    E+  L  +     D 
Sbjct: 474 ARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSAC----RVHKNAELAELAAEKLLSIDP 526

Query: 738 ----AYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-----SWNCMIMGFAIYGNG--- 785
               AY A  + ++YS  G    A  +++    K +      SW  +     ++G     
Sbjct: 527 NNSGAYSA--IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVV 584

Query: 786 ---KEAIL-----LFHELLETGFQPD 803
              ++A+      ++ E+   GF PD
Sbjct: 585 HPQRDAVYAMAARMWEEIKGAGFVPD 610



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 36/302 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y++ GD  SA + F +  +R    W++ +  YE   G   E ++++  +   G  
Sbjct: 264 ALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQ-NGRNDEAIDLFRSMITCGPE 322

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S  L  +L +C  L     G ++H   I+   +    +  A++  Y +      A ++
Sbjct: 323 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRM 382

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F +V   ++ + W  +I+   ++ + E A+ LF EM  +  +    T V +L AC+  G 
Sbjct: 383 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 442

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
            +EGK+ +  +                      N+ ++A           +S +  M+  
Sbjct: 443 VNEGKRYYDQI---------------------KNEHQIAP---------EMSHYACMVDL 472

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
               G    A     +M    ++PD I W  LLS    H + +  L  L   + L   PN
Sbjct: 473 LARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSACRVHKNAE--LAELAAEKLLSIDPN 527

Query: 532 GS 533
            S
Sbjct: 528 NS 529


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 268/815 (32%), Positives = 440/815 (53%), Gaps = 72/815 (8%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            +I+LK C +   F LG  VH  L++ G + D  +   L++ Y KC D E+A  +F  + +
Sbjct: 48   SILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGN 107

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              D + W+ ++     N     AI  F +M              +++AC+       G+ 
Sbjct: 108  KRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEI 167

Query: 418  IHGYVLKSA-LESNLSVCNCLISMYSRNN-KLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            I+G+V+K+  LE+++ V   LI M+ + +  L  A +VFD M + NL             
Sbjct: 168  IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL------------- 214

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                  +TW  +++     G  ++ + L   M+  G+ P+  + 
Sbjct: 215  ----------------------VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTY 252

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDN 592
            S VL A TEL LL  G++ H  ++R GL  D+ VG SL+DMY K   +  + ++++VF+ 
Sbjct: 253  SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ 312

Query: 593  MKNRNIVAWNSLISGYCFKG-LFVNAKKMLNQMEEEEIKPDLVSWNSLV----------S 641
            M   N+++W ++I+ Y   G     A ++  +M    I+P+  S++S++          +
Sbjct: 313  MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 372

Query: 642  GYSIWGQS-KEALVIIHHMKNSGIY--------------------PNVVTWTSLISGSLQ 680
            G  ++  + K  +  ++ + NS I                      N+V++ +++ G  +
Sbjct: 373  GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 432

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            N    E+   F ++    I  ++ T +SLL     +G +  G++IH   LK G+  +  +
Sbjct: 433  NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 492

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
               LI MYS+ GN+++A +VF +  ++ + SW  MI GFA +G    A+ +FH++LETG 
Sbjct: 493  CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 552

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ IT+ A+L+AC + G++ EG K+F+SM  ++ I+P +EHY+CMVDLLG++G L EA 
Sbjct: 553  KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAM 612

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            +FI +MP   DA +W  LLG+CR+HG+ E    A+  + + EP + A Y L+ NL A + 
Sbjct: 613  EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAG 672

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            +W+DV ++R SM E  +      SWI+++  VH F      HP   +IY EL  L S++K
Sbjct: 673  QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 732

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            ++GY+PDT  V  DI+EE+K + L  H+EK+A+ +GL+ T    PIR+ KN RVC DCHT
Sbjct: 733  EMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHT 792

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            A KY+S+  GREI +RD  RFHH + G CSCND W
Sbjct: 793  AIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 228/478 (47%), Gaps = 45/478 (9%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           GD  SA K F     R+   W+  +  +   G   ++ ++++ ++   G +      + +
Sbjct: 197 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC-ARDAIDLFLDMELSGYVPDRFTYSSV 255

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR---DVESANKLFSEVSD 357
           L  CT+L    LG ++H+ +I+ G   DV + C+L++ Y KC     V+ + K+F ++ +
Sbjct: 256 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 315

Query: 358 LEDDLLWNEIIMVKLRN-EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             + + W  II   +++ E  + AI+LF +M     +    +   +L+AC  +   + G+
Sbjct: 316 -HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 374

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q++ Y +K  + S   V N LISMY+R+ ++E A + FD + + NL S+N+++  Y    
Sbjct: 375 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 434

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A+ LFN++  + I     T+  LLSG  + G+                        
Sbjct: 435 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGA------------------------ 470

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
                      +  G + HG +L+ G   +  +  +L+ MY +   ++ A +VF+ M++R
Sbjct: 471 -----------MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 519

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+++W S+I+G+   G    A +M ++M E   KP+ +++ +++S  S  G   E     
Sbjct: 520 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 579

Query: 657 HHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + M K  GI P +  +  ++    ++    E+++F   M    +  ++    +LL  C
Sbjct: 580 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGAC 634



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 160/344 (46%), Gaps = 38/344 (11%)

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G   +  + L  M      P+ ++ S++L++    R  + G+  H  ++++GL+ D  V 
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
            +L+ +Y K    + A+ +F+ M N R++V+W++++S +    +   A      M E   
Sbjct: 83  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142

Query: 630 KPDLVSWNSLVS---------------GYSIWGQSKEALVII------HHMKNSGIYP-- 666
            P+   + +++                G+ +     EA V +        +K SG     
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202

Query: 667 ----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
                     N+VTWT +I+   Q    R+++  F+ M+     P+  T SS+L  C  L
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK---SGNLKSAREVFRKSANKTLASWN 773
           GLL  GK++H   ++ G   D  V   L+DMY+K    G++  +R+VF +     + SW 
Sbjct: 263 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 322

Query: 774 CMIMGFAIYGN-GKEAILLFHELLETGFQPDAITFTALLAACKN 816
            +I  +   G   KEAI LF +++    +P+  +F+++L AC N
Sbjct: 323 AIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 53/298 (17%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M Q++  P+ TT S LL++C      Q GK +H   +++G   D+ V   LI +YSK G+
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94

Query: 754 LKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            ++AR +F    NK  L SW+ M+  FA      +AI  F ++LE GF P+   F A++ 
Sbjct: 95  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154

Query: 813 ACKN-------------------------------------SGLVEEGWKYFDSMSTDYN 835
           AC N                                     SG +   +K FD M  + N
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP-ERN 213

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGALLGSCRIHGHLEYAE 892
           ++     ++ M+    + G   +A D    M    + PD   + ++L +C   G L   +
Sbjct: 214 LVT----WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 269

Query: 893 IASRRLFK----LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
               R+ +    L+ C   +   M    A     +D  ++   M E    +V+ W+ I
Sbjct: 270 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE---HNVMSWTAI 324



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 134/296 (45%), Gaps = 7/296 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  Y   G    A KAF + F ++   +++ ++ Y     + +E   ++ E+   G+ 
Sbjct: 394 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGIG 452

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +     +L     + A   G ++H  L+K G+  +  +  AL++ Y +C ++E+A ++
Sbjct: 453 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 512

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+E+ D  + + W  +I    ++     A+++F +M  +  K    T V +L AC+ VG 
Sbjct: 513 FNEMED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 571

Query: 412 FHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             EG K  +    +  +   +    C++ +  R+  L  A    +SM    +   W +++
Sbjct: 572 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 631

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTHGSYQNVLTLLRGMQ 524
            +    G  ++       +     +PD      LLS  H + G +++V+ + + M+
Sbjct: 632 GACRVHGNTELGRHAAEMILEQ--EPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 685


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Vitis vinifera]
          Length = 852

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 278/840 (33%), Positives = 433/840 (51%), Gaps = 115/840 (13%)

Query: 316  VHASLIKRGFDFD-VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            +H  L+ +G   D  H+    + F    + +    +L      +     WN++I   +  
Sbjct: 48   IHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPSSHTV---FWWNQLIRRSVHL 104

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
               E+ ++L+R MQ    +    T   +L+AC ++ +F  G  +H  V  S  E N+ V 
Sbjct: 105  GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 164

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N L+SMY R    E A +VFD M++              G+G                  
Sbjct: 165  NGLVSMYGRCGAWENARQVFDEMRER-------------GVG------------------ 193

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
             D+++WN +++ +   G     + +   M + LG RP+  S+  VL A   +     G++
Sbjct: 194  -DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 252

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL--------- 604
             HGY LR+GL  D++VG +++DMY K   ++ A +VF+ MK +++V+WN++         
Sbjct: 253  VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 312

Query: 605  --------------------------ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
                                      I+GY  +GL   A  +  QM     +P++V+  S
Sbjct: 313  FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVS 372

Query: 639  LVSGYSIWG---QSKEA-------------------LVIIHHMKN--------------- 661
            L+SG ++ G     KE                    L++I+ + +               
Sbjct: 373  LLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMF 432

Query: 662  SGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNSTTMSSLLQTCGGL 716
              I P   +VVTWT LI G+ Q+    E+L+ F QM Q D  + PN+ T+S  L  C  L
Sbjct: 433  DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARL 492

Query: 717  GLLQNGKEIHCLCLKNGFIKDA-YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            G L+ G++IH   L+N F     +VA  LIDMYSKSG++ +AR VF     +   SW  +
Sbjct: 493  GALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSL 552

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            + G+ ++G G+EA+ +F+E+ + G  PD +TF  +L AC +SG+V++G  YF+ M+ D+ 
Sbjct: 553  MTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFG 612

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            ++P  EHY+CMVDLL +AG LDEA + IR MP KP   +W ALL +CR++ ++E  E A+
Sbjct: 613  VVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAA 672

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
             +L +LE  N  +Y L+ N+ A +  W+DV R+R+ M   G+K     SW+Q  +    F
Sbjct: 673  NQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATF 732

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    HP + +IY  L  L+  +K LGYVPD R    D+D+EEKG +L  H+EKLA+ Y
Sbjct: 733  FAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAY 792

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            G++ T   APIR+ KN R C DCH+A  Y+S++   EI +RD +RFHHF+ G CSC   W
Sbjct: 793  GILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852



 Score =  222 bits (566), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 279/582 (47%), Gaps = 66/582 (11%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G ++++L+++  +   G          +LK C ++ +F  G  VHA +   GF+++V + 
Sbjct: 105 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 164

Query: 333 CALMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
             L++ YG+C   E+A ++F E+ +  + D + WN I+   ++      A+K+F  M   
Sbjct: 165 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 224

Query: 391 -SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              +  + ++V +L ACA VGA+  GKQ+HGY L+S L  ++ V N ++ MY++   +E 
Sbjct: 225 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEE 284

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VF+ MK  ++ SWN+M++ Y+ +G  D A  LF K+   +I+ +++TW+ +++G+  
Sbjct: 285 ANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQ 344

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR-------NG 562
            G     L + R M+  G  PN  ++  +L        L +G+E+H + ++       N 
Sbjct: 345 RGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDEND 404

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGYCFKGLFVNAKKM 620
              DL V  +L+DMY K    + A+ +FD +  K+R++V W  LI G    G    A ++
Sbjct: 405 PGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALEL 464

Query: 621 LNQMEEEE--IKPD------------------------------------LVSWNSLVSG 642
            +QM + +  + P+                                    L   N L+  
Sbjct: 465 FSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDM 524

Query: 643 YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           YS  G    A V+  +M       N V+WTSL++G   +    E+L+ F +MQ+  + P+
Sbjct: 525 YSKSGDVDAARVVFDNMHQR----NGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPD 580

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG------LIDMYSKSGNLKS 756
             T   +L  C   G++  G         NG  KD  V  G      ++D+ S++G L  
Sbjct: 581 GVTFVVVLYACSHSGMVDQGINYF-----NGMNKDFGVVPGAEHYACMVDLLSRAGRLDE 635

Query: 757 AREVFRKSANK-TLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           A E+ R    K T A W  ++    +Y N +      ++LLE
Sbjct: 636 AMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLE 677


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 268/815 (32%), Positives = 440/815 (53%), Gaps = 72/815 (8%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            +I+LK C +   F LG  VH  L++ G + D  +   L++ Y KC D E+A  +F  + +
Sbjct: 30   SILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGN 89

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              D + W+ ++     N     AI  F +M              +++AC+       G+ 
Sbjct: 90   KRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEI 149

Query: 418  IHGYVLKSA-LESNLSVCNCLISMYSRNN-KLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            I+G+V+K+  LE+++ V   LI M+ + +  L  A +VFD M + NL             
Sbjct: 150  IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL------------- 196

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                  +TW  +++     G  ++ + L   M+  G+ P+  + 
Sbjct: 197  ----------------------VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTY 234

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDN 592
            S VL A TEL LL  G++ H  ++R GL  D+ VG SL+DMY K   +  + ++++VF+ 
Sbjct: 235  SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ 294

Query: 593  MKNRNIVAWNSLISGYCFKG-LFVNAKKMLNQMEEEEIKPDLVSWNSLV----------S 641
            M   N+++W ++I+ Y   G     A ++  +M    I+P+  S++S++          +
Sbjct: 295  MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 354

Query: 642  GYSIWGQS-KEALVIIHHMKNSGIY--------------------PNVVTWTSLISGSLQ 680
            G  ++  + K  +  ++ + NS I                      N+V++ +++ G  +
Sbjct: 355  GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            N    E+   F ++    I  ++ T +SLL     +G +  G++IH   LK G+  +  +
Sbjct: 415  NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 474

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
               LI MYS+ GN+++A +VF +  ++ + SW  MI GFA +G    A+ +FH++LETG 
Sbjct: 475  CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 534

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ IT+ A+L+AC + G++ EG K+F+SM  ++ I+P +EHY+CMVDLLG++G L EA 
Sbjct: 535  KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAM 594

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            +FI +MP   DA +W  LLG+CR+HG+ E    A+  + + EP + A Y L+ NL A + 
Sbjct: 595  EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAG 654

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            +W+DV ++R SM E  +      SWI+++  VH F      HP   +IY EL  L S++K
Sbjct: 655  QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 714

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            ++GY+PDT  V  DI+EE+K + L  H+EK+A+ +GL+ T    PIR+ KN RVC DCHT
Sbjct: 715  EMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHT 774

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            A KY+S+  GREI +RD  RFHH + G CSCND W
Sbjct: 775  AIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 228/478 (47%), Gaps = 45/478 (9%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           GD  SA K F     R+   W+  +  +   G   ++ ++++ ++   G +      + +
Sbjct: 179 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC-ARDAIDLFLDMELSGYVPDRFTYSSV 237

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR---DVESANKLFSEVSD 357
           L  CT+L    LG ++H+ +I+ G   DV + C+L++ Y KC     V+ + K+F ++ +
Sbjct: 238 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 297

Query: 358 LEDDLLWNEIIMVKLRN-EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             + + W  II   +++ E  + AI+LF +M     +    +   +L+AC  +   + G+
Sbjct: 298 -HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 356

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q++ Y +K  + S   V N LISMY+R+ ++E A + FD + + NL S+N+++  Y    
Sbjct: 357 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 416

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A+ LFN++  + I     T+  LLSG  + G+                        
Sbjct: 417 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGA------------------------ 452

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
                      +  G + HG +L+ G   +  +  +L+ MY +   ++ A +VF+ M++R
Sbjct: 453 -----------MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 501

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+++W S+I+G+   G    A +M ++M E   KP+ +++ +++S  S  G   E     
Sbjct: 502 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 561

Query: 657 HHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + M K  GI P +  +  ++    ++    E+++F   M    +  ++    +LL  C
Sbjct: 562 NSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGAC 616



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 160/344 (46%), Gaps = 38/344 (11%)

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G   +  + L  M      P+ ++ S++L++    R  + G+  H  ++++GL+ D  V 
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
            +L+ +Y K    + A+ +F+ M N R++V+W++++S +    +   A      M E   
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 630 KPDLVSWNSLVS---------------GYSIWGQSKEALVII------HHMKNSGIYP-- 666
            P+   + +++                G+ +     EA V +        +K SG     
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184

Query: 667 ----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
                     N+VTWT +I+   Q    R+++  F+ M+     P+  T SS+L  C  L
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK---SGNLKSAREVFRKSANKTLASWN 773
           GLL  GK++H   ++ G   D  V   L+DMY+K    G++  +R+VF +     + SW 
Sbjct: 245 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 304

Query: 774 CMIMGFAIYGN-GKEAILLFHELLETGFQPDAITFTALLAACKN 816
            +I  +   G   KEAI LF +++    +P+  +F+++L AC N
Sbjct: 305 AIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 53/298 (17%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M Q++  P+ TT S LL++C      Q GK +H   +++G   D+ V   LI +YSK G+
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 754 LKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            ++AR +F    NK  L SW+ M+  FA      +AI  F ++LE GF P+   F A++ 
Sbjct: 77  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136

Query: 813 ACKN-------------------------------------SGLVEEGWKYFDSMSTDYN 835
           AC N                                     SG +   +K FD M  + N
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP-ERN 195

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGALLGSCRIHGHLEYAE 892
           ++     ++ M+    + G   +A D    M    + PD   + ++L +C   G L   +
Sbjct: 196 LVT----WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 251

Query: 893 IASRRLFK----LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
               R+ +    L+ C   +   M    A     +D  ++   M E    +V+ W+ I
Sbjct: 252 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE---HNVMSWTAI 306



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 134/296 (45%), Gaps = 7/296 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  Y   G    A KAF + F ++   +++ ++ Y     + +E   ++ E+   G+ 
Sbjct: 376 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGIG 434

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +     +L     + A   G ++H  L+K G+  +  +  AL++ Y +C ++E+A ++
Sbjct: 435 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 494

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+E+ D  + + W  +I    ++     A+++F +M  +  K    T V +L AC+ VG 
Sbjct: 495 FNEMED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 553

Query: 412 FHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             EG K  +    +  +   +    C++ +  R+  L  A    +SM    +   W +++
Sbjct: 554 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 613

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTHGSYQNVLTLLRGMQ 524
            +    G  ++       +     +PD      LLS  H + G +++V+ + + M+
Sbjct: 614 GACRVHGNTELGRHAAEMILEQ--EPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 667


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 763

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/774 (34%), Positives = 420/774 (54%), Gaps = 56/774 (7%)

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFS 390
            +C   N Y + +   + +   S V   + D++ WN+ I   +RN   ++A+++F  M   
Sbjct: 16   RCLCTNNYYRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRR 75

Query: 391  SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
            S+ + +  I   L+  AK     +       +     E +L   N +++ Y RN +L  A
Sbjct: 76   SSVSYNAMISGYLRN-AKFSLARD-------LFDKMPERDLFSWNVMLTGYVRNRRLGEA 127

Query: 451  TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM----------------NSSRIQ 494
             ++FD M   ++ SWN+M+S Y   G+VD A  +FNKM                ++ R++
Sbjct: 128  HKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLK 187

Query: 495  P-----------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                        ++I+WNCL+ G+       +   L   M         + +S   Q V 
Sbjct: 188  EARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQ-VG 246

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            +L   K        +       D++  T+++  YV+N  +  A++ FD M  +N +++N+
Sbjct: 247  DLSQAKR-------LFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNA 299

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKP--DLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            +++GY      V  KKM+   E  E  P  ++ SWN++++GY   G   +A  +   M  
Sbjct: 300  MLAGY------VQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQ 353

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 + V+W ++ISG  QN +Y E+L  F++M+++    N +T S  L TC  +  L+ 
Sbjct: 354  R----DCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALEL 409

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            GK++H   +K GF    +V   L+ MY K G+   A +VF     K + SWN MI G+A 
Sbjct: 410  GKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYAR 469

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G G++A++LF  + + G +PD IT   +L+AC +SGL++ G +YF SM  DYN+ PT +
Sbjct: 470  HGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSK 529

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+CM+DLLG+AG L+EA + +R MPF P A  WGALLG+ RIHG+ E  E A+  +FK+
Sbjct: 530  HYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKM 589

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            EP NS  Y L+ NL A S RW DV ++R  M E GV+ V  +SW+++   +H FS     
Sbjct: 590  EPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCF 649

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
            HP    IY  L  L  +M++ GYV  T+ V  D++EEEK  +L  H+EKLA+ +G++   
Sbjct: 650  HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIP 709

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +  PIRV+KN RVC DCH A K++S + GR I LRD  RFHHF EG CSC D W
Sbjct: 710  AGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 10/275 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + GD + A + F     R    W++ +  Y    G V E  + + E+  K  I
Sbjct: 237 TMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQ-NGMVDEARKYFDEMPVKNEI 295

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             + +L   ++    ++A     E+  ++  R    ++     ++  YG+   +  A KL
Sbjct: 296 SYNAMLAGYVQYKKMVIA----GELFEAMPCR----NISSWNTMITGYGQNGGIAQARKL 347

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F ++    D + W  II    +N  +E A+ +F EM+     +   T    L  CA + A
Sbjct: 348 F-DMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAA 406

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              GKQ+HG V+K+  E+   V N L+ MY +    + A  VF+ +++ ++ SWN+MI+ 
Sbjct: 407 LELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAG 466

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           Y   G+   A  LF  M  + ++PD IT   +LS 
Sbjct: 467 YARHGFGRQALVLFESMKKAGVKPDEITMVGVLSA 501


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/817 (33%), Positives = 435/817 (53%), Gaps = 76/817 (9%)

Query: 295  RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
            R L  +L+LC    +   G EV   +   GF  D +L   L   Y  C D++ A+++F E
Sbjct: 95   RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154

Query: 355  VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
            V  +E  L WN ++    ++  +  +I LF++M  S  +  S T   + ++ + + + H 
Sbjct: 155  VK-IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            G+Q+HG++LKS      SV N L++ Y +N +                            
Sbjct: 214  GEQLHGFILKSGFGERNSVGNSLVAFYLKNQR---------------------------- 245

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
               VD A  +F++M     + D+I+WN +++G+ ++G  +  L++   M   G   + ++
Sbjct: 246  ---VDSARKVFDEMT----ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 298

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            +  V     + RL+  GR  H   ++     +     +L+DMY K   L +A+ VF  M 
Sbjct: 299  IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------------- 635
            +R++V++ S+I+GY  +GL   A K+  +MEEE I PD+ +                   
Sbjct: 359  DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418

Query: 636  ---W-------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
               W             N+L+  Y+  G  +EA ++   M+      ++++W ++I G  
Sbjct: 419  VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR----VKDIISWNTIIGGYS 474

Query: 680  QNENYRESLKFF-IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            +N    E+L  F + ++++   P+  T++ +L  C  L     G+EIH   ++NG+  D 
Sbjct: 475  KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            +VA  L+DMY+K G L  A  +F   A+K L SW  MI G+ ++G GKEAI LF+++ + 
Sbjct: 535  HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            G + D I+F +LL AC +SGLV+EGW++F+ M  +  I PT+EHY+C+VD+L + G L +
Sbjct: 595  GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A+ FI  MP  PDATIWGALL  CRIH  ++ AE  + ++F+LEP N+  Y LM N+ A 
Sbjct: 655  AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
            + +WE V+RLR  + + G++     SWI+I   V++F A  + +P T  I   L  + + 
Sbjct: 715  AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            M + GY P T+    D +E EK + L  H+EKLA+  G++ +     IRV KN RVC DC
Sbjct: 775  MIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDC 834

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H  AK+MS +  REI LRD  RFH F++G CSC   W
Sbjct: 835  HEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 235/527 (44%), Gaps = 47/527 (8%)

Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAA 247
            SC+S  F      +  R +   +  H  ++K G     + +  SL+  YL+     SA 
Sbjct: 198 FSCVSKSF------SSLRSVHGGEQLHGFILKSG-FGERNSVGNSLVAFYLKNQRVDSAR 250

Query: 248 KAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL 307
           K F     R    W+S +  Y S  G  ++ L V+ ++   G+      +  +   C   
Sbjct: 251 KVFDEMTERDVISWNSIINGYVS-NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 309

Query: 308 MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
               LG  VH+  +K  F  +      L++ Y KC D++SA  +F E+SD    + +  +
Sbjct: 310 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVSYTSM 368

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I    R      A+KLF EM+         T+  +L  CA+     EGK++H ++ ++ L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             ++ V N L+ MY++   ++ A  VF  M+  ++ SWN++I  Y+   Y + A SLFN 
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           +                                  ++   F P+  +V+ VL A   L  
Sbjct: 489 L----------------------------------LEEKRFSPDERTVACVLPACASLSA 514

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
              GRE HGYI+RNG   D +V  SL+DMY K   L  A  +FD++ ++++V+W  +I+G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYP 666
           Y   G    A  + NQM +  I+ D +S+ SL+   S  G   E     + M++   I P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            V  +  ++    +  +  ++ +F   M    I P++T   +LL  C
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMP---IPPDATIWGALLCGC 678



 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 153/619 (24%), Positives = 262/619 (42%), Gaps = 83/619 (13%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L   Y   GD   A++ F          W+  + +     G+    + ++ ++   GV  
Sbjct: 135 LSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK-SGDFSGSIGLFKKMMSSGVEM 193

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
            S   + + K  + L +   G ++H  ++K GF     +  +L+ FY K + V+SA K+F
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            E+++  D + WN II   + N   E  + +F +M  S  +    TIV +   CA     
Sbjct: 254 DEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 312

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G+ +H   +K+        CN L+ MYS+   L+ A  VF  M D ++ S+ SMI+ Y
Sbjct: 313 SLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY 372

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              G    A  LF +M    I PD+ T                                 
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYT--------------------------------- 399

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             V+ VL      RLL  G+  H +I  N L +D++V  +LMDMY K   +Q A+ VF  
Sbjct: 400 --VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457

Query: 593 MKNRNIVAWNSLISGYCFKGLFVN-AKKMLN-QMEEEEIKPDLVS--------------- 635
           M+ ++I++WN++I GY  K  + N A  + N  +EE+   PD  +               
Sbjct: 458 MRVKDIISWNTIIGGYS-KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516

Query: 636 --------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                                NSLV  Y+  G    AL++ H + +     ++V+WT +I
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCG----ALLLAHMLFDDIASKDLVSWTVMI 572

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
           +G   +   +E++  F QM+Q  I+ +  +  SLL  C   GL+  G     +      I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632

Query: 736 KDAYVATG-LIDMYSKSGNL-KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
           +        ++DM +++G+L K+ R +           W  ++ G  I+ + K A  +  
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692

Query: 794 ELLETGFQPDAITFTALLA 812
           ++ E   +P+   +  L+A
Sbjct: 693 KVFE--LEPENTGYYVLMA 709


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/797 (34%), Positives = 432/797 (54%), Gaps = 80/797 (10%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +HA L+  G    + +   L+N Y    DV  +   F ++   +D   WN +I   + N 
Sbjct: 138  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQ-KDVYAWNSMISAYVHNG 196

Query: 376  KWENAIKLFREMQF-SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             +  AI  F ++   S  +    T   +L+AC   G   +G++IH +  K   + N+ V 
Sbjct: 197  HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVA 253

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              LI MYSR                                G+  +A SLF+ M      
Sbjct: 254  ASLIHMYSR-------------------------------FGFTGIARSLFDDMPFR--- 279

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D+ +WN ++SG   +G+    L +L  M+  G + N  +V  +L    +L  +      
Sbjct: 280  -DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLI 338

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H Y++++GL++DL+V  +L++MY K   L++A++ F  M   ++V+WNS+I+ Y      
Sbjct: 339  HLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDP 398

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK-------------------EALVI 655
            V A     +M+    +PDL++   LVS  SI  QS+                   E +VI
Sbjct: 399  VTAHGFFVKMQLNGFQPDLLT---LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVI 455

Query: 656  IHHM--------------KNSGIYP--NVVTWTSLISGSLQNENYRESLKFFIQMQQ-ED 698
             + +              K   I P  +V++W +LI+G  QN    E+++ +  M++ ++
Sbjct: 456  GNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKE 515

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            I PN  T  S+L     +G LQ G +IH   +K     D +VAT LID+Y K G L  A 
Sbjct: 516  IIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 575

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             +F +   ++  +WN +I    I+G+ ++ + LF E+L+ G +PD +TF +LL+AC +SG
Sbjct: 576  SLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSG 635

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
             VEEG K+   +  +Y I P+++HY CMVDLLG+AGYL+ A+DFI+ MP +PDA+IWGAL
Sbjct: 636  FVEEG-KWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGAL 694

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            LG+CRIHG++E  + AS RLF+++  N   Y L+ N+ A   +WE V+++R    E G+K
Sbjct: 695  LGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK 754

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                WS I++++ V VF      HP   EIY EL  L ++MK LGY+PD   V QD++E+
Sbjct: 755  KTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEED 814

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            EK  +L SH+E+LAI +G++ T  ++PIR+ KN RVC DCH A K++S +  REI +RD 
Sbjct: 815  EKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDS 874

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFHHF++G CSC D W
Sbjct: 875  NRFHHFKDGICSCGDYW 891



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 180/698 (25%), Positives = 302/698 (43%), Gaps = 70/698 (10%)

Query: 147 HHFNTRTSINQNRHSHK-PNSITNSPTSLALPPTDTL-----AKQAQLSCISSGFCFLNE 200
           H F+T  ++   R  H    ++ +  TS  LPP         A ++     S G    NE
Sbjct: 59  HPFSTNLTLASARWRHILAPTLKSRYTSKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNE 118

Query: 201 TNKFRCL--SSVKSK-----HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLY 253
              F  L  SS K+      HA ++  GK+  S  +   L+  Y   GD + +   F   
Sbjct: 119 EIDFNFLFDSSTKTPFAKCLHALLVVAGKV-QSIFISTRLVNLYANLGDVSLSRCTFDQI 177

Query: 254 FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFW 311
             +    W+S +  Y    G   E +  + +L     I R    T   +LK C  L+   
Sbjct: 178 PQKDVYAWNSMISAY-VHNGHFHEAIGCFYQLLLVSEI-RPDFYTFPPVLKACGTLVD-- 233

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
            G ++H    K GF ++V +  +L++ Y +      A  LF ++    D   WN +I   
Sbjct: 234 -GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP-FRDMGSWNAMISGL 291

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           ++N     A+ +  EM+    K    T+V +L  C ++G       IH YV+K  LE +L
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N LI+MY++   LE A + F  M   ++ SWNS+I++Y        A   F KM  +
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
             QPD++T   L S                                    V + R  K  
Sbjct: 412 GFQPDLLTLVSLAS-----------------------------------IVAQSRDCKNS 436

Query: 552 RESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           R  HG+I+R G L  D+ +G +++DMY K   L +A +VF+ +  +++++WN+LI+GY  
Sbjct: 437 RSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQ 496

Query: 611 KGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
            GL   A ++   MEE +EI P+  +W S++  Y+  G  ++ + I   +  + ++ +V 
Sbjct: 497 NGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVF 556

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
             T LI    +     +++  F Q+ QE    +S T ++++   G  G  +   ++    
Sbjct: 557 VATCLIDVYGKCGRLVDAMSLFYQVPQE----SSVTWNAIISCHGIHGHAEKTLKLFGEM 612

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR----KSANKTLASWNCMIMGFAIYGNG 785
           L  G   D      L+   S SG ++  +  FR         +L  + CM+    + G  
Sbjct: 613 LDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMV---DLLGRA 669

Query: 786 KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               + +  + +   QPDA  + ALL AC+  G +E G
Sbjct: 670 GYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELG 707



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 10/161 (6%)

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            K +H L +  G ++  +++T L+++Y+  G++  +R  F +   K + +WN MI  +  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194

Query: 782 YGNGKEAILLFHE-LLETGFQPDAITFTALLAACKN--SGLVEEGWKYFDSMSTDYNIIP 838
            G+  EAI  F++ LL +  +PD  TF  +L AC     G     W +   +   +N+  
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAF--KLGFQWNVFV 252

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
                + ++ +  + G+   A      MPF+ D   W A++
Sbjct: 253 A----ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMI 288


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 290/885 (32%), Positives = 459/885 (51%), Gaps = 95/885 (10%)

Query: 244  TSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKL 303
             S A + F+  SRS   W   L   +     ++E +  + ++   G+   +     +LK 
Sbjct: 48   VSGAPSIFISQSRSPEWWIDLLRS-KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106

Query: 304  CTKLMAFWLGVEVHASLIKRGFDFD-VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
               L    LG ++HA + K G+  D V +   L+N Y KC D  +  K+F  +S+  + +
Sbjct: 107  VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-RNQV 165

Query: 363  LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEGKQIH 419
             WN +I      EKWE A++ FR M   + +  S T+V ++ AC+ +        GKQ+H
Sbjct: 166  SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             Y L+   E N  + N L++MY +  KL               +S   ++ S+ G     
Sbjct: 226  AYGLRKG-ELNSFIINTLVAMYGKLGKL---------------ASSKVLLGSFGG----- 264

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            D++TWN +LS    +      L  LR M   G  P+  ++S VL
Sbjct: 265  ---------------RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309

Query: 540  QAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
             A + L +L+ G+E H Y L+NG LD + +VG++L+DMY     + + + VFD M +R I
Sbjct: 310  PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369

Query: 599  VAWNSLISGYC-----------FKGLFVNAKKMLNQMEEEEIKP---------------- 631
              WN++I+GY            F G+  +A  + N      + P                
Sbjct: 370  GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429

Query: 632  ---------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                     D    N+L+  YS  G+   A+ I   M++     ++VTW ++I+G + +E
Sbjct: 430  FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSE 485

Query: 683  NYRESLKFFIQMQQED-----------IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            ++ ++L    +MQ  +           +KPNS T+ ++L +C  L  L  GKEIH   +K
Sbjct: 486  HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            N    D  V + L+DMY+K G L+ +R+VF +   K + +WN +IM + ++GNG+EAI L
Sbjct: 546  NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
               ++  G +P+ +TF ++ AAC +SG+V+EG + F  M  DY + P+ +HY+C+VDLLG
Sbjct: 606  LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG 665

Query: 852  KAGYLDEAWDFIRTMPFKPD-ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            +AG + EA+  +  MP   + A  W +LLG+ RIH +LE  EIA++ L +LEP  +++Y 
Sbjct: 666  RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ + +  W+    +R +M E GV+     SWI+    VH F A  + HP + ++  
Sbjct: 726  LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L   M+K GYVPDT CV  +++E+EK  +L  H+EKLAI +G++ T     IRV K
Sbjct: 786  YLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAK 845

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC+DCH A K++S +  REI LRD  RFH F+ G CSC D W
Sbjct: 846  NLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 201/448 (44%), Gaps = 32/448 (7%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L + K  HA  +K G +  +  +  +L+  Y       S  + F   F R    W++ + 
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y     + + LL   G     G++  S  +  ++  C +  AF     +H  ++KRG D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D  ++  LM+ Y +   ++ A ++F ++ D  D + WN +I   + +E  E+A+ L  +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDALLLLHK 496

Query: 387 MQ-----------FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
           MQ             S K  S T++ +L +CA + A  +GK+IH Y +K+ L ++++V +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+ MY++   L+++ +VFD +   N+ +WN +I +Y   G    A  L   M    ++P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           + +T+  + +     G     L +   M+   G  P+    + V+       L + GR  
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL-----LGRAGRIK 671

Query: 555 HGYILRNGLDYDL--------YVGTSLM--DMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             Y L N +  D          +G S +  ++ +     QN  ++  N+ +  ++  N  
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI- 730

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
              Y   GL+  A ++   M+E+ ++ +
Sbjct: 731 ---YSSAGLWDKATEVRRNMKEQGVRKE 755


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 290/885 (32%), Positives = 459/885 (51%), Gaps = 95/885 (10%)

Query: 244  TSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKL 303
             S A + F+  SRS   W   L   +     ++E +  + ++   G+   +     +LK 
Sbjct: 48   VSGAPSIFISQSRSPEWWIDLLRS-KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106

Query: 304  CTKLMAFWLGVEVHASLIKRGFDFD-VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
               L    LG ++HA + K G+  D V +   L+N Y KC D  +  K+F  +S+  + +
Sbjct: 107  VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-RNQV 165

Query: 363  LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEGKQIH 419
             WN +I      EKWE A++ FR M   + +  S T+V ++ AC+ +        GKQ+H
Sbjct: 166  SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             Y L+   E N  + N L++MY +  KL               +S   ++ S+ G     
Sbjct: 226  AYGLRKG-ELNSFIINTLVAMYGKLGKL---------------ASSKVLLGSFGG----- 264

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            D++TWN +LS    +      L  LR M   G  P+  ++S VL
Sbjct: 265  ---------------RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309

Query: 540  QAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
             A + L +L+ G+E H Y L+NG LD + +VG++L+DMY     + + + VFD M +R I
Sbjct: 310  PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369

Query: 599  VAWNSLISGYC-----------FKGLFVNAKKMLNQMEEEEIKP---------------- 631
              WN++I+GY            F G+  +A  + N      + P                
Sbjct: 370  GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429

Query: 632  ---------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                     D    N+L+  YS  G+   A+ I   M++     ++VTW ++I+G + +E
Sbjct: 430  FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSE 485

Query: 683  NYRESLKFFIQMQQED-----------IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            ++ ++L    +MQ  +           +KPNS T+ ++L +C  L  L  GKEIH   +K
Sbjct: 486  HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            N    D  V + L+DMY+K G L+ +R+VF +   K + +WN +IM + ++GNG+EAI L
Sbjct: 546  NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
               ++  G +P+ +TF ++ AAC +SG+V+EG + F  M  DY + P+ +HY+C+VDLLG
Sbjct: 606  LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG 665

Query: 852  KAGYLDEAWDFIRTMPFKPD-ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            +AG + EA+  +  MP   + A  W +LLG+ RIH +LE  EIA++ L +LEP  +++Y 
Sbjct: 666  RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ + +  W+    +R +M E GV+     SWI+    VH F A  + HP + ++  
Sbjct: 726  LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L   M+K GYVPDT CV  +++E+EK  +L  H+EKLAI +G++ T     IRV K
Sbjct: 786  YLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAK 845

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC+DCH A K++S +  REI LRD  RFH F+ G CSC D W
Sbjct: 846  NLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 201/448 (44%), Gaps = 32/448 (7%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L + K  HA  +K G +  +  +  +L+  Y       S  + F   F R    W++ + 
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y     + + LL   G     G++  S  +  ++  C +  AF     +H  ++KRG D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D  ++  LM+ Y +   ++ A ++F ++ D  D + WN +I   + +E  E+A+ L  +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDALLLLHK 496

Query: 387 MQ-----------FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
           MQ             S K  S T++ +L +CA + A  +GK+IH Y +K+ L ++++V +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+ MY++   L+++ +VFD +   N+ +WN +I +Y   G    A  L   M    ++P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           + +T+  + +     G     L +   M+   G  P+    + V+       L + GR  
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL-----LGRAGRIK 671

Query: 555 HGYILRNGLDYDL--------YVGTSLM--DMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             Y L N +  D          +G S +  ++ +     QN  ++  N+ +  ++  N  
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI- 730

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
              Y   GL+  A ++   M+E+ ++ +
Sbjct: 731 ---YSSAGLWDKATEVRRNMKEQGVRKE 755


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/811 (32%), Positives = 423/811 (52%), Gaps = 75/811 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +LK CT      LG +VH  ++  GFD D  +  +L+  Y KC     A  LF  + D  
Sbjct: 16   VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPD-R 74

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
              + WN +    + ++    A+ LF +M  S  +    ++  M+  C  +    +G++IH
Sbjct: 75   SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIH 134

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            GY++K   +S+    N L+ MY++                               +G ++
Sbjct: 135  GYLIKLGYDSDAFSANALVDMYAK-------------------------------VGILE 163

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A S+F+++     +PDI++WN +++G   H  +   L LLR M   G  PN  ++S  L
Sbjct: 164  DASSVFDEIA----KPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSAL 219

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            +A   + L + GR+ H  +++  +  D ++G  L+DMY K + + +A+ VF  M  R+++
Sbjct: 220  KACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMI 279

Query: 600  AWNSLISGYC----------------FKGLFVN---------------AKKMLNQMEEEE 628
            AWN++ISG+                  +G+  N               A  M  Q+    
Sbjct: 280  AWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALS 339

Query: 629  IKP----DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
            +K     D    NSL+  Y   G  ++A  +    + S I  ++V +TSL++   Q+   
Sbjct: 340  LKSGFEFDNYVVNSLIDTYGKCGHVEDATRVF---EESPIV-DLVLFTSLVTAYAQDGQG 395

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L+ +++MQ   IKP+S   SSLL  C  L   + GK++H   LK GF+ D +    L
Sbjct: 396  EEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSL 455

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            ++MY+K G+++ A   F +   + + SW+ MI G A +G GKEA+ LF ++L+ G  P+ 
Sbjct: 456  VNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNH 515

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            IT  ++L AC ++GLV E   YF+SM   + I P  EHY+CM+DLLG+AG L+ A + + 
Sbjct: 516  ITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVN 575

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MPF+ +A +WGALLG+ RIH +++  E A+  L  LEP  S  + L+ N+ A    W+ 
Sbjct: 576  KMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDK 635

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V R+R  M +  VK     SW+++   V+ F      H  + EIY +L  L   +KK GY
Sbjct: 636  VARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGY 695

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            VP       D++  EK ++L  H+EKLA+ +GL+ T   APIRV KN R+C DCHT  K+
Sbjct: 696  VPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKF 755

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S +  REI +RD  RFHHFREG CSC + W
Sbjct: 756  ISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 158/625 (25%), Positives = 280/625 (44%), Gaps = 107/625 (17%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H  ++  G  ++SD+ V  SL+  Y + G F  A   F     RS   W++    Y 
Sbjct: 30  KQVHGIVVVTG--FDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCY- 86

Query: 270 SFGGEVQELLEVWGELHGKGV-IFRSRILTII----------LKLCTKLMAFWLGVEVHA 318
                      V  ++HG+ V +F   +L+ I          + +CT L     G ++H 
Sbjct: 87  -----------VHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHG 135

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
            LIK G+D D     AL++ Y K   +E A+ +F E++   D + WN II   + +E   
Sbjct: 136 YLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK-PDIVSWNAIIAGCVLHEYHH 194

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A++L REM  S       T+   L+ACA +     G+Q+H  ++K  + S+  +   LI
Sbjct: 195 RALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLI 254

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MYS+ N ++ A  VF  M + ++ +WN++IS ++     + A SLF  M++        
Sbjct: 255 DMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHT-------- 306

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
                                    + +GF  N +++S VL+++  L+     R+ H   
Sbjct: 307 -------------------------EGIGF--NQTTLSTVLKSIAALQANYMCRQIHALS 339

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
           L++G ++D YV  SL+D Y K   +++A  VF+     ++V + SL++ Y   G    A 
Sbjct: 340 LKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEAL 399

Query: 619 KMLNQMEEEEIKP-----------------------------------DLVSWNSLVSGY 643
           ++  +M++  IKP                                   D+ + NSLV+ Y
Sbjct: 400 RLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMY 459

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
           +  G  ++A      +   GI    V+W+++I G  Q+   +E+L+ F QM +  + PN 
Sbjct: 460 AKCGSIEDASCAFSRIPVRGI----VSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNH 515

Query: 704 TTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREV 760
            T+ S+L  C   GL+   K   + + +  G   +++ Y    +ID+  ++G L++A E+
Sbjct: 516 ITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYAC--MIDLLGRAGKLEAAMEL 573

Query: 761 FRKSANKTLA-SWNCMIMGFAIYGN 784
             K   +  A  W  ++    I+ N
Sbjct: 574 VNKMPFQANALVWGALLGAARIHKN 598


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/744 (33%), Positives = 415/744 (55%), Gaps = 44/744 (5%)

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            +L++ Y K   +  A  +F+++ +  D + W  +++   R  ++ +A+K F +M      
Sbjct: 102  SLLSMYAKSGRLADARVVFAQMPE-RDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                 +  +L +CA   A   G+++H +V+K  L S + V N ++ MY +    E A  V
Sbjct: 161  PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F+ MK  + SSWN+M+S YT  G +D+A S+F  M     +  I++WN +++G+  +G  
Sbjct: 221  FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENME----ERSIVSWNAIIAGYNQNGLD 276

Query: 514  QNVLTLL-RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
               L    R + +    P+  +V+ VL A   LR+LK G++ H YILR G+ Y     + 
Sbjct: 277  DMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPY----SSQ 332

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            +M                           N+LIS Y   G    A++++++    ++  +
Sbjct: 333  IM---------------------------NALISTYAKSGSVETARRIMDKAVVADL--N 363

Query: 633  LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
            ++S+ +L+ GY   G +K+A  +   M N     +V+ WT++I G  QN    E+++ F 
Sbjct: 364  VISFTALLEGYVKLGDTKQAREVFDVMNNR----DVIAWTAMIVGYEQNGQNDEAMELFR 419

Query: 693  QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
             M +   +PNS T++++L  C  L  L  GK+IHC  +++   +   V+  +I +Y++SG
Sbjct: 420  SMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSG 479

Query: 753  NLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            ++  AR VF +    K   +W  MI+  A +G G++AI+LF E+L  G +PD +T+  + 
Sbjct: 480  SVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVF 539

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            +AC ++G +++G +Y++ M  ++ I+P + HY+CMVDLL +AG L EA +FI+ MP  PD
Sbjct: 540  SACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPD 599

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
              +WG+LL +CR+  + + AE+A+ +L  ++P NS  Y+ + N+ +   RW D  R+   
Sbjct: 600  TVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKL 659

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
              +  VK    +SW  +   VHVF A+   HP    I  +   +  E+KK G+VPD   V
Sbjct: 660  RKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSV 719

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+D+E K ++L  H+EKLAI +GL+ T  +  +R++KN RVC+DCHTA K++S V  R
Sbjct: 720  LHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDR 779

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD  RFHHFR+G CSC D W
Sbjct: 780  EIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 149/628 (23%), Positives = 270/628 (42%), Gaps = 70/628 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G    A   F     R    W+  +       G   + ++ + ++ G+G+ 
Sbjct: 102 SLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNR-AGRFWDAVKTFLDMVGEGLA 160

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
               +LT +L  C    A  +G +VH+ +IK G    V +  +++  YGKC D E+A  +
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220

Query: 352 FSEV----------------------------SDLEDDLL--WNEIIMVKLRNEKWENAI 381
           F  +                             ++E+  +  WN II    +N   + A+
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMAL 280

Query: 382 KLF-REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           K F R +  SS +    T+  +L ACA +     GKQ+H Y+L++ +  +  + N LIS 
Sbjct: 281 KFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALIST 340

Query: 441 YSRNNKLELATRVFDS--MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           Y+++  +E A R+ D   + D N+ S+ +++  Y  LG    A  +F+ MN+     D+I
Sbjct: 341 YAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR----DVI 396

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            W  ++ G+  +G     + L R M   G  PN  +++ VL A   L  L YG++ H   
Sbjct: 397 AWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRA 456

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNA 617
           +R+  +  + V  +++ +Y ++  +  A+ VFD +   +  V W S+I      GL   A
Sbjct: 457 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQA 516

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLIS 676
             +  +M    +KPD V++  + S  +  G   +       M N  GI P +  +  ++ 
Sbjct: 517 IVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVD 576

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC-----GGLGLLQNGKEIHCLCLK 731
              +     E+ +F   +Q+  + P++    SLL  C       L  L   K +      
Sbjct: 577 LLARAGLLTEAHEF---IQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDN 633

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-----SWNCMIMGFAIYGNG- 785
           +G    AY A  L ++YS  G    A  +++   +K +      SW  +     ++G   
Sbjct: 634 SG----AYSA--LANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADD 687

Query: 786 ----------KEAILLFHELLETGFQPD 803
                     K+A  ++ E+ + GF PD
Sbjct: 688 VLHPQRDAICKKAAEMWEEIKKAGFVPD 715



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 21/411 (5%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSR----NNKLELATRVFDSM--KDHNLSSWNSM 468
           G+ IH + +K+ L  +  +CN L+S Y+R          A R+FD +     N  +WNS+
Sbjct: 44  GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           +S Y   G +  A  +F +M     + D ++W  ++ G    G + + +     M   G 
Sbjct: 104 LSMYAKSGRLADARVVFAQMP----ERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGL 159

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            P+   ++ VL +         GR+ H ++++ GL   + V  S++ MY K    + A+ 
Sbjct: 160 APSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARA 219

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VF+ MK R+  +WN+++S Y  +G    A  M   MEE  I    VSWN++++GY+  G 
Sbjct: 220 VFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI----VSWNAIIAGYNQNGL 275

Query: 649 SKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
              AL     M   S + P+  T TS++S        +   +    + +  +  +S  M+
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSA 765
           +L+ T    G ++  + I    +    + D  V   T L++ Y K G+ K AREVF    
Sbjct: 336 ALISTYAKSGSVETARRI----MDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMN 391

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           N+ + +W  MI+G+   G   EA+ LF  ++ +G +P++ T  A+L+AC +
Sbjct: 392 NRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACAS 442


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 274/797 (34%), Positives = 428/797 (53%), Gaps = 80/797 (10%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +HA L+  G    + +   L+N Y    DV  +   F ++   +D   WN +I   + N 
Sbjct: 138  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQ-KDVYTWNSMISAYVHNG 196

Query: 376  KWENAIKLFREMQF-SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             +  AI  F ++   S  +    T   +L+AC   G   +G++IH +  K   + N+ V 
Sbjct: 197  HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVA 253

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              LI MYSR                                G+  +A SLF+ M      
Sbjct: 254  ASLIHMYSR-------------------------------FGFTGIARSLFDDMPFR--- 279

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D+ +WN ++SG   +G+    L +L  M+  G + N  +V  +L    +L  +      
Sbjct: 280  -DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLI 338

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H Y++++GL++DL+V  +L++MY K   L++A++ F  M   ++V+WNS+I+ Y      
Sbjct: 339  HLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDP 398

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK-------------------EALVI 655
            V A     +M+    +PDL++   LVS  SI  QS+                   E +VI
Sbjct: 399  VTAHGFFVKMQLNGFQPDLLT---LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVI 455

Query: 656  ----------------IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ-ED 698
                             H +    +  +V++W +LI+G  QN    E+++ +  M++ ++
Sbjct: 456  GNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKE 515

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            I PN  T  S+L     +G LQ G  IH   +K     D +VAT LID+Y K G L  A 
Sbjct: 516  IIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 575

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             +F +   ++  +WN +I    I+G+ ++ + LF E+L+ G +PD +TF +LL+AC +SG
Sbjct: 576  SLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSG 635

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
             VEEG K+   +  +Y I P+++HY CMVDLLG+AGYL+ A+ FI+ MP +PDA+IWGAL
Sbjct: 636  FVEEG-KWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGAL 694

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            LG+CRIHG++E  + AS RLF+++  N   Y L+ N+ A   +WE V+++R    E G+K
Sbjct: 695  LGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK 754

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                WS I++++ V VF      HP   EIY EL  L ++MK LGY+PD   V QD++E+
Sbjct: 755  KTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEED 814

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            EK  +L SH+E+LAI +G++ T  ++PIR+ KN RVC DCH A K++S +  REI +RD 
Sbjct: 815  EKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDS 874

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFHHF++G CSC D W
Sbjct: 875  NRFHHFKDGICSCGDYW 891



 Score =  182 bits (463), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 180/698 (25%), Positives = 301/698 (43%), Gaps = 70/698 (10%)

Query: 147 HHFNTRTSINQNRHSHK-PNSITNSPTSLALPPTDTL-----AKQAQLSCISSGFCFLNE 200
           H F+T  ++   R  H    ++ +  TS  LPP         A ++     S G    NE
Sbjct: 59  HPFSTNLTLASARWRHILAPTLKSRHTSKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNE 118

Query: 201 TNKFRCL--SSVKSK-----HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLY 253
              F  L  SS K+      HA ++  GK+  S  +   L+  Y   GD + +   F   
Sbjct: 119 EIDFNFLFDSSTKTPFAKCLHALLVVAGKV-QSIFISTRLVNLYANLGDVSLSRCTFDQI 177

Query: 254 FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFW 311
             +    W+S +  Y    G   E +  + +L     I R    T   +LK C  L+   
Sbjct: 178 PQKDVYTWNSMISAY-VHNGHFHEAIGCFYQLLLVSEI-RPDFYTFPPVLKACGTLVD-- 233

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
            G  +H    K GF ++V +  +L++ Y +      A  LF ++    D   WN +I   
Sbjct: 234 -GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP-FRDMGSWNAMISGL 291

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           ++N     A+ +  EM+    K    T+V +L  C ++G       IH YV+K  LE +L
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N LI+MY++   LE A + F  M   ++ SWNS+I++Y        A   F KM  +
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
             QPD++T   L S                                    V + R  K  
Sbjct: 412 GFQPDLLTLVSLAS-----------------------------------IVAQSRDCKNS 436

Query: 552 RESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           R  HG+I+R G L  D+ +G +++DMY K   L +A +VF+ +  +++++WN+LI+GY  
Sbjct: 437 RSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQ 496

Query: 611 KGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
            GL   A ++   MEE +EI P+  +W S++  Y+  G  ++ + I   +  + ++ +V 
Sbjct: 497 NGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVF 556

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
             T LI    +     +++  F Q+ QE    +S T ++++   G  G  +   ++    
Sbjct: 557 VATCLIDVYGKCGRLVDAMSLFYQVPQE----SSVTWNAIISCHGIHGHAEKTLKLFGEM 612

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR----KSANKTLASWNCMIMGFAIYGNG 785
           L  G   D      L+   S SG ++  +  FR         +L  + CM+    + G  
Sbjct: 613 LDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMV---DLLGRA 669

Query: 786 KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               + +  + +   QPDA  + ALL AC+  G +E G
Sbjct: 670 GYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELG 707



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 16/164 (9%)

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            K +H L +  G ++  +++T L+++Y+  G++  +R  F +   K + +WN MI  +  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194

Query: 782 YGNGKEAILLFHE-LLETGFQPDAITFTALLAACKNSGLVEEG-----WKYFDSMSTDYN 835
            G+  EAI  F++ LL +  +PD  TF  +L AC   G + +G     W +   +   +N
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAF--KLGFQWN 249

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           +       + ++ +  + G+   A      MPF+ D   W A++
Sbjct: 250 VFVA----ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMI 288


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/835 (31%), Positives = 434/835 (51%), Gaps = 76/835 (9%)

Query: 277  ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH-----ASLIKRGFDFDVHL 331
            +L E  G L   GV  RS     +L+LC+++ +   G   H     +SL + G D  +  
Sbjct: 76   DLEEALGLLGSDGVDDRS--YGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQ 133

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
            K  LM  Y KC D+E+A ++F E+  + D  +W  ++    +       + LFR+M    
Sbjct: 134  KLVLM--YLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCG 191

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
             +  + TI  +L+  A +G+  +G+ +HG + K    S  +V N L++ Y+++N+ + A 
Sbjct: 192  VRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAI 251

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             VFD M                                      D+I+WN ++SG  ++G
Sbjct: 252  LVFDGMP-----------------------------------HRDVISWNSMISGCTSNG 276

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
             Y   + L   M   G   + +++  VL A  EL LL  GR  HGY ++ G      +  
Sbjct: 277  LYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLAN 336

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
             L+DMY      ++  ++F NM  +N+V+W ++I+ Y   GL+     +  +M  E  +P
Sbjct: 337  VLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRP 396

Query: 632  DLVSWNSL---------------VSGYSIWGQSKEALVIIHHMK---------------- 660
            D+ +  S                V GY+I    ++ L + + +                 
Sbjct: 397  DIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIF 456

Query: 661  NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
            +  +  ++++W +LI G  +N    E+   F +M  + ++PN+ TM+ +L     L  L+
Sbjct: 457  DGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLE 515

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             G+E+H   L+ G+++D +VA  LIDMY K G L  AR +F + +NK L SW  M+ G+ 
Sbjct: 516  RGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYG 575

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
            ++G G++AI LF ++  +G  PDA +F+A+L AC +SGL +EGW++FD+M  ++ I P +
Sbjct: 576  MHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRL 635

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            +HY+CMVDLL   G L EA++FI +MP +PD++IW +LL  CRIH +++ AE  + R+F+
Sbjct: 636  KHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFE 695

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            LEP N+  Y L+ N+ A + RWE V +L++ +   G++     SWI+    VHVF A+  
Sbjct: 696  LEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNR 755

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP    I   L  +   M++ G+ P  +      D    G+ L  H+ KLA+ +G++  
Sbjct: 756  NHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNL 815

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                 IRV KN+RVCS CH AAK++S +  REI LRD  RFHHF +G CSC   W
Sbjct: 816  SEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 163/646 (25%), Positives = 284/646 (43%), Gaps = 74/646 (11%)

Query: 202 NKFRCLSSVKSKH--AQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYA 259
           ++ R L   K  H   +   +G+    + + + L+  YL+ GD  +A + F      S  
Sbjct: 102 SEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDV 161

Query: 260 D-WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
             W++ +  Y    G+++E + ++ ++H  GV   +  ++ +LK    L +   G  VH 
Sbjct: 162 RVWTALMSGYAK-AGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHG 220

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
            L K GF     +  ALM FY K    + A  +F  +    D + WN +I     N  ++
Sbjct: 221 LLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPH-RDVISWNSMISGCTSNGLYD 279

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            AI+LF  M     +  S T++ +L ACA++     G+ +HGY +K+   S  S+ N L+
Sbjct: 280 KAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLL 339

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MYS  +      ++F +M   N+ SW +MI+SYT  G  D    LF +M     +PDI 
Sbjct: 340 DMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIF 399

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
                                              +++  L A     LLK+G+  HGY 
Sbjct: 400 -----------------------------------AITSALHAFAGNELLKHGKSVHGYA 424

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA- 617
           +RNG++  L V  +LM+MYVK   ++ A+ +FD + ++++++WN+LI GY    L   A 
Sbjct: 425 IRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAF 484

Query: 618 ---KKMLNQMEEEEIK-----PDLVSWNSLVSGYSIWGQSKE------------------ 651
               +ML Q+    +      P   S +SL  G  +   +                    
Sbjct: 485 SLFTEMLLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYV 544

Query: 652 ---ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
              AL++   + +     N+++WT +++G   +   R+++  F QM+   I P++ + S+
Sbjct: 545 KCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSA 604

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA-TGLIDMYSKSGNLKSAREVFRKSANK 767
           +L  C   GL   G        K   I+      T ++D+   +GNLK A E       +
Sbjct: 605 ILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIE 664

Query: 768 TLAS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
             +S W  ++ G  I+ N K A  +   + E   +P+   +  LLA
Sbjct: 665 PDSSIWVSLLRGCRIHRNVKLAEEVAERVFE--LEPENTGYYVLLA 708


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 273/897 (30%), Positives = 455/897 (50%), Gaps = 77/897 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            HA++I  G +  S  +   LI  Y + G   SA K F    ++    W + +  +   G 
Sbjct: 135  HARIICHG-LLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGY 193

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
            E +E + ++ E+H  G+     + + +L  CTK+  F +G ++HA + K G   + ++  
Sbjct: 194  E-EEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCN 252

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            AL+  Y +  +  SA K+FS++   +D++ +N +I    +    + A++LF +M+    K
Sbjct: 253  ALVTLYSRMPNFVSAEKVFSKMQS-KDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK 311

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                T+  +L ACA  GA  +G+Q+H YV+K+ + S++ V   L+ +Y   + ++ A  +
Sbjct: 312  PDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F + +  N+  WN M+ ++  L  +  ++ +F                            
Sbjct: 372  FLTAQTENVVLWNVMLVAFGKLDNLSESFRIF---------------------------- 403

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
                   R MQ  G  PN  +   +L+  T +  L  G + H  +++ G  +++YV + L
Sbjct: 404  -------RQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVL 456

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            +DMY K+  L  A  +   +   ++V+W +LISGY    LF  A K   +M    I+ D 
Sbjct: 457  IDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDN 516

Query: 634  VSW-----------------------------------NSLVSGYSIWGQSKEALVIIHH 658
            + +                                   N+LVS Y+  G+ KEA +    
Sbjct: 517  IGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEK 576

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            +       + ++W  LISG  Q+    ++LK F QM +  ++ +  T  S +     +  
Sbjct: 577  IDAK----DSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIAN 632

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            ++ GK+IH + +K GF  D  V+  LI  Y+K G+++ AR  F +   K   SWN MI G
Sbjct: 633  IKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITG 692

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            ++ +G G EA+ LF ++ + G  P+ +TF  +L+AC + GLV +G  YF+SMS ++ ++P
Sbjct: 693  YSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVP 752

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
               HY+C+VDL+ +AG+L  A  FI  MP +PDATIW  LL +C +H ++E  E A++ L
Sbjct: 753  KPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHL 812

Query: 899  FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
             +LEP +SA Y L+ N+ A+S +W+  ++ R  M   GVK     SWI++   VH F   
Sbjct: 813  LELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVG 872

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
               HP   +IY  L  L  +  ++GY  D   +  D+++E+K   +  H+EKLAI +GL+
Sbjct: 873  DRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLL 932

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                  PI V+KN RVC DCH+  K++S +  R I +RD  RFHHF  G CSC D W
Sbjct: 933  SLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 175/721 (24%), Positives = 304/721 (42%), Gaps = 88/721 (12%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADW----S 262
           L   K  H +++K+G   N   +   L+  Y   GD     K F    +RS   W    S
Sbjct: 26  LVECKKLHGKILKLG-FGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIIS 84

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT-KLMAFWLGVEVHASLI 321
            F+E   S       +L+++  +  + V         +L+ C+   +      ++HA +I
Sbjct: 85  GFMEKKMS-----NRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARII 139

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
             G      +   L+  Y K   + SA K+F  +   +D + W  +I    +N   E AI
Sbjct: 140 CHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCT-KDSVSWVAMISGFSQNGYEEEAI 198

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            LF EM  +           +L  C K+  F  G+Q+H  V K        VCN L+++Y
Sbjct: 199 HLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLY 258

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           SR      A +VF  M+  +  S+NS+IS     G+ D A  LF KM    ++PD +T  
Sbjct: 259 SRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVA 318

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
            LLS   ++G+                                   L  G + H Y+++ 
Sbjct: 319 SLLSACASNGA-----------------------------------LCKGEQLHSYVIKA 343

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
           G+  D+ V  +L+D+YV    ++ A E+F   +  N+V WN ++  +        + ++ 
Sbjct: 344 GISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIF 403

Query: 622 NQMEEEEIKPDLVSWNS-----------------------------------LVSGYSIW 646
            QM+ + + P+  ++ S                                   L+  Y+  
Sbjct: 404 RQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKH 463

Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
           G+   A VI+  +       +VV+WT+LISG  Q+  + E+LK F +M    I+ ++   
Sbjct: 464 GKLDTAHVILRTLTED----DVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           SS +  C G+  L  G++IH     +G+ +D  +   L+ +Y++ G +K A   F K   
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
           K   SWN +I GFA  G  ++A+ +F ++     +    TF + ++A  N   +++G K 
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQG-KQ 638

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
             +M         IE  + ++    K G +++A      MP K D + W A++     HG
Sbjct: 639 IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVS-WNAMITGYSQHG 697

Query: 887 H 887
           +
Sbjct: 698 Y 698



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 162/642 (25%), Positives = 286/642 (44%), Gaps = 82/642 (12%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +G+    +    +L LC    +     ++H  ++K GF  +  L   L++ Y    D++ 
Sbjct: 4   RGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDG 63

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
             K+F ++ +      W++II   +  +     + LF  M   +      +   +L+AC+
Sbjct: 64  VVKVFEDMPN-RSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACS 122

Query: 408 --KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
             ++G     +QIH  ++   L  +  + N LI +Y++N  +  A +VFD++   +  SW
Sbjct: 123 GHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSW 181

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            +MIS ++  GY + A  LF +M+++ I P    ++ +LSG                   
Sbjct: 182 VAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSG------------------- 222

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
                            T+++L   G + H  + + G   + YV  +L+ +Y +     +
Sbjct: 223 ----------------CTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVS 266

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---- 641
           A++VF  M++++ V++NSLISG   +G    A ++  +M+ + +KPD V+  SL+S    
Sbjct: 267 AEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACAS 326

Query: 642 -GYSIWGQSKEALVI--------------------------IHHMKNSGIYPNVVTWTSL 674
            G    G+   + VI                           H M  +    NVV W  +
Sbjct: 327 NGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVM 386

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           +    + +N  ES + F QMQ + + PN  T  S+L+TC  +G L  G++IH   +K GF
Sbjct: 387 LVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGF 446

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
             + YV + LIDMY+K G L +A  + R      + SW  +I G+A +    EA+  F E
Sbjct: 447 QFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKE 506

Query: 795 LLETGFQPDAITFTALLAACK-----NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
           +L  G Q D I F++ ++AC      N G       Y    S D +I       + +V L
Sbjct: 507 MLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSI------GNALVSL 560

Query: 850 LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             + G + EA+     +  K D+  W  L+      G+ E A
Sbjct: 561 YARCGRIKEAYLEFEKIDAK-DSISWNGLISGFAQSGYCEDA 601



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 58/121 (47%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M+   I  N  T   LL  C   G L   K++H   LK GF  ++ +   L+D+Y   G+
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           L    +VF    N+++ SW+ +I GF         + LF  ++E    P  I+F ++L A
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 814 C 814
           C
Sbjct: 121 C 121


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 280/829 (33%), Positives = 438/829 (52%), Gaps = 94/829 (11%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFD-VHLKCALMNFYGKCRDVESANKLFSEVSDL 358
            +LK    L    LG ++HA + K G+  D V +   L+N Y KC D  +  K+F  +S+ 
Sbjct: 16   LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE- 74

Query: 359  EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEG 415
             + + WN +I      EKWE A++ FR M   + +  S T+V ++ AC+ +        G
Sbjct: 75   RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 134

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            KQ+H Y L+   E N  + N L++MY +  KL               +S   ++ S+ G 
Sbjct: 135  KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKL---------------ASSKVLLGSFGG- 177

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                D++TWN +LS    +      L  LR M   G  P+  ++
Sbjct: 178  -------------------RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 218

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            S VL A + L +L+ G+E H Y L+NG LD + +VG++L+DMY     + + + VFD M 
Sbjct: 219  SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 278

Query: 595  NRNIVAWNSLISGYC-----------FKGLFVNAKKMLNQMEEEEIKP------------ 631
            +R I  WN++I+GY            F G+  +A  + N      + P            
Sbjct: 279  DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 338

Query: 632  -------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                         D    N+L+  YS  G+   A+ I   M++     ++VTW ++I+G 
Sbjct: 339  AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR----DLVTWNTMITGY 394

Query: 679  LQNENYRESLKFFIQMQQED-----------IKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            + +E++ ++L    +MQ  +           +KPNS T+ ++L +C  L  L  GKEIH 
Sbjct: 395  VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 454

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              +KN    D  V + L+DMY+K G L+ +R+VF +   K + +WN +IM + ++GNG+E
Sbjct: 455  YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQE 514

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            AI L   ++  G +P+ +TF ++ AAC +SG+V+EG + F  M  DY + P+ +HY+C+V
Sbjct: 515  AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 574

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPD-ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            DLLG+AG + EA+  +  MP   + A  W +LLG+ RIH +LE  EIA++ L +LEP  +
Sbjct: 575  DLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVA 634

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            ++Y L+ N+ + +  W+    +R +M E GV+     SWI+    VH F A  + HP + 
Sbjct: 635  SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 694

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
            ++   L  L   M+K GYVPDT CV  +++E+EK  +L  H+EKLAI +G++ T     I
Sbjct: 695  KLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTII 754

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RV KN RVC+DCH A K++S +  REI LRD  RFH F+ G CSC D W
Sbjct: 755  RVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 201/448 (44%), Gaps = 32/448 (7%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L + K  HA  +K G +  +  +  +L+  Y       S  + F   F R    W++ + 
Sbjct: 231 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 290

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y     + + LL   G     G++  S  +  ++  C +  AF     +H  ++KRG D
Sbjct: 291 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D  ++  LM+ Y +   ++ A ++F ++ D  D + WN +I   + +E  E+A+ L  +
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDALLLLHK 409

Query: 387 MQ-----------FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
           MQ             S K  S T++ +L +CA + A  +GK+IH Y +K+ L ++++V +
Sbjct: 410 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 469

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+ MY++   L+++ +VFD +   N+ +WN +I +Y   G    A  L   M    ++P
Sbjct: 470 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 529

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           + +T+  + +     G     L +   M+   G  P+    + V+       L + GR  
Sbjct: 530 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL-----LGRAGRIK 584

Query: 555 HGYILRNGLDYDL--------YVGTSLM--DMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             Y L N +  D          +G S +  ++ +     QN  ++  N+ +  ++  N  
Sbjct: 585 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI- 643

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
              Y   GL+  A ++   M+E+ ++ +
Sbjct: 644 ---YSSAGLWDKATEVRRNMKEQGVRKE 668



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 1/124 (0%)

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSA 757
           IKP++    +LL+    L  ++ GK+IH    K G+  D+  VA  L+++Y K G+  + 
Sbjct: 6   IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            +VF + + +   SWN +I     +   + A+  F  +L+   +P + T  +++ AC N 
Sbjct: 66  YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125

Query: 818 GLVE 821
            + E
Sbjct: 126 PMPE 129


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/738 (34%), Positives = 401/738 (54%), Gaps = 75/738 (10%)

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            ++   ++A+  F  M+  S + +      +L+ C        GK+IHG V+ S    NL 
Sbjct: 7    KSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLF 66

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
                +++MY++  ++  A  +FD M +                                 
Sbjct: 67   AMTGVVNMYAKCRQINDAYNMFDRMPER-------------------------------- 94

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
               D++ WN ++SG+  +G  +  L L+  M   G RP+  ++  +L AV + RLL+ G 
Sbjct: 95   ---DLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGM 151

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
              HGY+LR G +  + V T+L+DMY K   +  A+ +FD M +R +V+WNS+I GY   G
Sbjct: 152  AVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSG 211

Query: 613  LFVNAKKMLNQMEEEEIKP-----------------------------------DLVSWN 637
                A  +  +M +E ++P                                   D+   N
Sbjct: 212  DAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMN 271

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            SL+S YS   +   A  I  +++N      +V+W ++I G  QN    E+L  F +MQ  
Sbjct: 272  SLISMYSKCKRVDIAADIFKNLRNK----TLVSWNAMILGYAQNGCVNEALNAFCEMQSR 327

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            +IKP+S TM S++     L + +  K IH L ++    K+ +V T L+DMY+K G + +A
Sbjct: 328  NIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTA 387

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            R++F     + + +WN MI G+  +G GK ++ LF E+ +   +P+ ITF   L+AC +S
Sbjct: 388  RKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHS 447

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLVEEG  +F+SM  DY I PT++HY  MVDLLG+AG L++AWDFI+ MP KP  T++GA
Sbjct: 448  GLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGA 507

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            +LG+C+IH +++  E A+  +FKL P +   + L+ N+ A ++ W  V ++R  M++ G+
Sbjct: 508  MLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGL 567

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            +     S ++I   VH F +    HP + +IY  L  LV E++  GYVPDT  ++ D+++
Sbjct: 568  QKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSIH-DVED 626

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            + K ++L +H+EKLAI +GL+ T +  PI + KN RVC DCH A KY+SLV GREI +RD
Sbjct: 627  DVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 686

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFH F++G CSC D W
Sbjct: 687  MHRFHLFKDGVCSCGDYW 704



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 236/504 (46%), Gaps = 42/504 (8%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  H  +I  G  WN   M   ++  Y +      A   F     R    W++ +  Y  
Sbjct: 50  KEIHGSVITSGFSWNLFAMT-GVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQ 108

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
            G     L+ V   +  +G    S  +  IL          +G+ VH  +++ GF+  V+
Sbjct: 109 NGFAKVALMLVL-RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVN 167

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  AL++ Y KC  V  A  +F  + D    + WN +I   +++   E A+ +F++M   
Sbjct: 168 VSTALVDMYSKCGSVSIARVIFDGM-DHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDE 226

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             +  + T++  L ACA +G    GK +H  V +  L+S++SV N LISMYS+  ++++A
Sbjct: 227 GVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIA 286

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             +F ++++  L SWN+MI  Y   G V+ A + F +M S  I+PD  T           
Sbjct: 287 ADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTM---------- 336

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                                   VSV+  A+ EL + +  +  HG ++R  LD +++V 
Sbjct: 337 ------------------------VSVI-PALAELSIPRQAKWIHGLVIRRFLDKNVFVM 371

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T+L+DMY K   +  A+++FD M  R+++ WN++I GY   GL   + ++  +M++  IK
Sbjct: 372 TALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIK 431

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLK 689
           P+ +++   +S  S  G  +E L     MK   GI P +  + +++    +     ++  
Sbjct: 432 PNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWD 491

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
           F   +Q+  IKP  T   ++L  C
Sbjct: 492 F---IQKMPIKPGITVYGAMLGAC 512



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 187/419 (44%), Gaps = 41/419 (9%)

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           +L G+    S  + L+    M+    RP   + + +L+   +   LK G+E HG ++ +G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
             ++L+  T +++MY K   + +A  +FD M  R++V WN++ISGY   G    A  ++ 
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 623 QMEEEEIKPDLVSW-----------------------------------NSLVSGYSIWG 647
           +M EE  +PD ++                                     +LV  YS  G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
               A VI   M     +  VV+W S+I G +Q+ +   ++  F +M  E ++P + T+ 
Sbjct: 181 SVSIARVIFDGMD----HRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVM 236

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
             L  C  LG L+ GK +H L  +     D  V   LI MYSK   +  A ++F+   NK
Sbjct: 237 GALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNK 296

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
           TL SWN MI+G+A  G   EA+  F E+     +PD+ T  +++ A     +  +  K+ 
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQA-KWI 355

Query: 828 DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
             +     +   +   + +VD+  K G +  A      M  +   T W A++     HG
Sbjct: 356 HGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVIT-WNAMIDGYGTHG 413


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/689 (35%), Positives = 395/689 (57%), Gaps = 10/689 (1%)

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKL 447
            +S   A S +  ++L  C +     + K++  ++ L     ++  + N L+ +Y+++  L
Sbjct: 15   YSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNL 74

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
              A  +FD M   ++ SWN+M+S+Y+  G V+   ++F++M+      D +++N +++G 
Sbjct: 75   SDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVH----DAVSYNTVIAGF 130

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              +G     L     MQ  GF     +   VL A ++L  +K G++ HG I+   L   +
Sbjct: 131  SGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESV 190

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +V  +L +MY K   L  A+ +FD M N+N+V+WNS+ISGY   G      K+  +M+  
Sbjct: 191  FVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSS 250

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
             + PD V+ ++++S Y   G   EA      +K      + V WT+++ G  QN    ++
Sbjct: 251  GLMPDQVTISNILSAYFQCGYIDEACKTFREIKEK----DKVCWTTMMVGCAQNGKEEDA 306

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            L  F +M  E+++P++ T+SS++ +C  L  L  G+ +H   +  G   D  V++ L+DM
Sbjct: 307  LLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDM 366

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            YSK G    A  VF++   + + SWN MI+G+A  G   EA+ L+ E+L    +PD ITF
Sbjct: 367  YSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITF 426

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
              +L+AC ++GLVE G  YF S+S  + + PT +HYSCM++LLG+AGY+D+A D I++M 
Sbjct: 427  VGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMT 486

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
            F+P+  IW  LL  CRI+  +   E+A+R LF+L+P N+  Y ++ N+ A   RW+DV  
Sbjct: 487  FEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAA 546

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            +R  M    +K    +SWI+ID  VH F AE   H  T +IY EL  L+ ++++ G+ PD
Sbjct: 547  VRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPD 606

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTRVCSDCHTAAKYMS 1046
            T  V  D+ EEEK   +  H+EKLA+ + L+K    R PIR++KN RVC DCH   K++S
Sbjct: 607  TNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVS 666

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +  R I LRD  RFHHF EG CSC D W
Sbjct: 667  KIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 238/522 (45%), Gaps = 59/522 (11%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A+++ Y K  +VE    +F ++S + D + +N +I     N     A++ F  MQ    +
Sbjct: 94  AMLSAYSKSGNVEDLRAVFDQMS-VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFE 152

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           +   T V +L AC+++     GKQIHG ++ ++L  ++ V N L +MY++   L+ A  +
Sbjct: 153 STDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWL 212

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT-------------- 499
           FD M + N+ SWNSMIS Y   G  +    LF +M SS + PD +T              
Sbjct: 213 FDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYI 272

Query: 500 -----------------WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
                            W  ++ G   +G  ++ L L R M     RP+  ++S V+ + 
Sbjct: 273 DEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSC 332

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             L  L  G+  HG  +  G+D+DL V ++L+DMY K     +A  VF  M  RN+++WN
Sbjct: 333 ARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWN 392

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KN 661
           S+I GY   G  + A  +  +M  E +KPD +++  ++S     G  +      + + K 
Sbjct: 393 SMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKI 452

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
            G+ P    ++ +I+  L    Y +     I+      +PN    S+LL  C     + N
Sbjct: 453 HGMNPTFDHYSCMIN-LLGRAGYMDKAVDLIKSMT--FEPNCLIWSTLLSVCRINCDVNN 509

Query: 722 GKEIHCLCLKNGFIKDAYVATGLI---DMYSKSGNLK---SAREVFRKSANKTLASWNCM 775
           G+    +  ++ F  D + A   I   ++Y+  G  K   + R + + +  K  A+++ +
Sbjct: 510 GE----MAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWI 565

Query: 776 IMGFAIYG--------NGKEAIL-----LFHELLETGFQPDA 804
            +   ++         +  E I      L  +L E+GF PD 
Sbjct: 566 EIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDT 607



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 102/519 (19%), Positives = 201/519 (38%), Gaps = 98/519 (18%)

Query: 226 SDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
           +D  +++ + H Y + G+ + A   F     R    W++ L  Y S  G V++L  V+ +
Sbjct: 56  TDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAY-SKSGNVEDLRAVFDQ 114

Query: 285 LHGKGVIFRSRIL-------------------------------TIILKLCTKLMAFWLG 313
           +     +  + ++                                 +L  C++L+    G
Sbjct: 115 MSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRG 174

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            ++H  ++       V +  AL N Y KC  ++ A  LF  + + ++ + WN +I   L+
Sbjct: 175 KQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVN-KNVVSWNSMISGYLQ 233

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N + E   KLF EMQ S       TI  +L A  + G   E  +      +   E +   
Sbjct: 234 NGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACK----TFREIKEKDKVC 289

Query: 434 CNCLISMYSRNNKLELATRVFDSM------------------------------------ 457
              ++   ++N K E A  +F  M                                    
Sbjct: 290 WTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAV 349

Query: 458 ---KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
               DH+L   ++++  Y+  G    AW +F +M    +  ++I+WN ++ G+  +G   
Sbjct: 350 IFGVDHDLLVSSALVDMYSKCGETADAWIVFKRM----LTRNVISWNSMILGYAQNGKDL 405

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR----NGLDYDLYVG 570
             L L   M     +P+  +   VL A     L++ G+   GY       +G++      
Sbjct: 406 EALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQ---GYFYSISKIHGMNPTFDHY 462

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVN----AKKMLNQME 625
           + ++++  +   +  A ++  +M    N + W++L+S  C     VN    A + L +++
Sbjct: 463 SCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS-VCRINCDVNNGEMAARHLFELD 521

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
                P ++    L + Y+  G+ K+   +   MKN+ I
Sbjct: 522 PHNAGPYIM----LSNIYAACGRWKDVAAVRSLMKNNKI 556


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 273/871 (31%), Positives = 446/871 (51%), Gaps = 80/871 (9%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            HA +I    I + +   + L F  L   +   A +            W++ LE+    G 
Sbjct: 55   HAHLITANLIHDPEITSQVLAF-LLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGC 113

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              QE+LE +  +  +GV+        ++  C K     LG EVH  ++K GF  +  L  
Sbjct: 114  P-QEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNN 172

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
             LM  Y KC  ++   +LF +++   D + WN +I   +    +  A+ LF EM  S   
Sbjct: 173  NLMGLYSKCGKLKEVCQLFEKMTH-RDVISWNTMISCYVLKGMYREALDLFDEMLVSGVL 231

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE----L 449
                T+V ++  CAK+     GK++H Y++ + L    S+ NCL+ MYS+  K++    L
Sbjct: 232  PDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGL 291

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
             +R  +S  D  L  W +++S Y     +D A  LF+KMN    +  +++W  ++SG+  
Sbjct: 292  LSRCDESEVDVVL--WTTLVSGYVKSNKIDKARQLFDKMN----ERSLVSWTTMMSGYVQ 345

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
             G Y   L L + M+     P+  ++  VL A   L     GR  H +I+  G+  D ++
Sbjct: 346  GGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFL 405

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
            G +L+D+Y K   L  A   F+ +  ++  +WNS++ G+C  G    A+   N++ E+  
Sbjct: 406  GNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEK-- 463

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                                                 ++V+W ++++  ++++ + ES +
Sbjct: 464  -------------------------------------DIVSWNTMVNAYVKHDLFNESFE 486

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F +MQ  ++KP+ TT+ SLL +C  +G L +G  ++    KN    DA + T LIDMY 
Sbjct: 487  IFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYG 546

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G ++ A E+F +   K +  W  M+  +A+ G   EAI L+ E+ E G +PD +TF A
Sbjct: 547  KCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIA 606

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            LLAAC + GLV+EG+KYF+ + + YNIIPTI HY CMVDLLG+ G+L+E   FI  MP +
Sbjct: 607  LLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIE 666

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            PD +IW +L+ +CR H ++E AE A ++L +++P N+  + L+ N+ A + RW+DV ++R
Sbjct: 667  PDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVR 726

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              + E GV     ++ I+ + +VH F A                +LVS         D  
Sbjct: 727  TKLHETGVPKQPGFTMIEQNGVVHEFVAS---------------NLVS--------ADIL 763

Query: 990  CVYQDID-----EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            C+ QDI+     ++E       H+E+LA+ +GL+  +  +PIRV+ + R+C DCH+  K 
Sbjct: 764  CMLQDIERRLLVKQELSDTTSQHSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKL 823

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S    REI +RD  RFH F +G CSC D W
Sbjct: 824  ISQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/747 (34%), Positives = 403/747 (53%), Gaps = 59/747 (7%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D L WN+ I   +RN   ++A+ +F  M   S+ + +     M+    +   F+  + + 
Sbjct: 48   DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYN----AMISGYLRNSKFNLARNL- 102

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
                    E +L   N +++ Y RN +L  A R+FD M + ++ SWNS++S Y   GYVD
Sbjct: 103  ---FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVD 159

Query: 480  VAWSLFNKM----------------NSSRIQP-----------DIITWNCLLSGHFTHGS 512
             A  +F+ M                ++ RI+            D+I+WNCL+ G      
Sbjct: 160  EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVS--VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
              +   L   M      P   ++S   ++    +   L   R     +       D++  
Sbjct: 220  LGDARWLFDKM------PVRDAISWNTMISGYAQGGGLSQARR----LFDESPTRDVFTW 269

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            T+++  YV+N  L  A+  FD M  +N V++N++I+GY      V  KKM    E  E  
Sbjct: 270  TAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGY------VQTKKMDIARELFESM 323

Query: 631  P--DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
            P  ++ SWN++++GY   G   +A      M       + V+W ++I+G  Q+ +Y E+L
Sbjct: 324  PCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR----DCVSWAAIIAGYAQSGHYEEAL 379

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
              F++++Q+    N  T    L TC  +  L+ GK+IH   +K G+    +V   L+ MY
Sbjct: 380  NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
             K G++  A + F     K + SWN M+ G+A +G G++A+ +F  +   G +PD IT  
Sbjct: 440  FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
             +L+AC ++GL++ G +YF SM+ DY +IPT +HY+CM+DLLG+AG L+EA D IR MPF
Sbjct: 500  GVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            +P A  WGALLG+ RIHG+ E  E A+  +FK+EP NS  Y L+ NL A S RW D +++
Sbjct: 560  QPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKM 619

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R  M ++GV+ V  +SW+++   +H FS     HP    IY  L  L  +M++ GYV  T
Sbjct: 620  RSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLT 679

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
            + V  D++EEEK  +L  H+EKLA+ +G++      PIRV+KN RVC DCH+A K++S +
Sbjct: 680  KLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKI 739

Query: 1049 RGREIFLRDGARFHHFREGECSCNDCW 1075
             GR I LRD  RFHHF EG CSC D W
Sbjct: 740  VGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 189/431 (43%), Gaps = 23/431 (5%)

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           A + F L   +    W+S L  Y    G V E  EV+  +  K  I  + +L   +    
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYAQ-NGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGR 188

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
                   +E    L +   D+D+     LM  + + + +  A  LF ++  + D + WN
Sbjct: 189 --------IEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMP-VRDAISWN 239

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I    +      A +LF E    S      T   M+    + G   E K         
Sbjct: 240 TMISGYAQGGGLSQARRLFDE----SPTRDVFTWTAMVSGYVQNGMLDEAKTF----FDE 291

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
             E N    N +I+ Y +  K+++A  +F+SM   N+SSWN+MI+ Y  +G +  A   F
Sbjct: 292 MPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
           + M     Q D ++W  +++G+   G Y+  L +   ++  G   N ++    L    ++
Sbjct: 352 DMMP----QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
             L+ G++ HG  ++ G     +VG +L+ MY K   +  A + F+ ++ +++V+WN+++
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGI 664
           +GY   G    A  +   M+   +KPD ++   ++S  S  G         + M K+ G+
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 665 YPNVVTWTSLI 675
            P    +T +I
Sbjct: 528 IPTSKHYTCMI 538



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/539 (22%), Positives = 224/539 (41%), Gaps = 88/539 (16%)

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
           +KD ++  WN  IS++   G+ D A  +FN M     +   +++N ++SG+  +  +   
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMP----RRSSVSYNAMISGYLRNSKFNLA 99

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
             L   M      P     S  +     +R  + G     + L    + D+    SL+  
Sbjct: 100 RNLFDQM------PERDLFSWNVMLTGYVRNCRLGDARRLFDLMP--EKDVVSWNSLLSG 151

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY-------------------------CFK 611
           Y +N  +  A+EVFDNM  +N ++WN L++ Y                         C  
Sbjct: 152 YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLM 211

Query: 612 GLFVNAKKMLNQMEEEEIKP--DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
           G FV  KK+ +     +  P  D +SWN+++SGY+  G   +A  +           +V 
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR----DVF 267

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           TWT+++SG +QN    E+  FF +M +++    +  ++  +QT           +I    
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT--------KKMDIAREL 319

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            ++   ++      +I  Y + G++  AR+ F     +   SW  +I G+A  G+ +EA+
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379

Query: 790 LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-----------------------Y 826
            +F E+ + G   +  TF   L+ C +   +E G +                       Y
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439

Query: 827 FDSMSTDY--NIIPTIEH-----YSCMVDLLGKAGYLDEA---WDFIRTMPFKPDATIWG 876
           F   S D   +    IE      ++ M+    + G+  +A   ++ ++T   KPD     
Sbjct: 440 FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499

Query: 877 ALLGSCRIHGHLEYAE---IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
            +L +C   G L+       +  + + + P  S +Y  M++LL  + R E+ + L  +M
Sbjct: 500 GVLSACSHTGLLDRGTEYFYSMTKDYGVIP-TSKHYTCMIDLLGRAGRLEEAQDLIRNM 557



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 126/262 (48%), Gaps = 61/262 (23%)

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            +GL++ G +YF  M+ +Y++ PT +HY+CM+DLLG+   L+E                 G
Sbjct: 777  TGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE-----------------G 819

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            ALLG+ RIHG+ E  E A++  FK+ P NS                  + ++R    +VG
Sbjct: 820  ALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMR----DVG 858

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP--DTRCVYQD 994
            V+ V  +SW ++   +H FS                  L  E + +G++   D +   ++
Sbjct: 859  VQKVPGYSWFEVQNKIHTFSVG--------------LFLSRERENIGFLEELDLKMRERE 904

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN-TRVCSDCHTAAKYMSLVRGREI 1053
             ++E   K L   +E LA   G++      P RV+K    VC DC +A K+MS + GR I
Sbjct: 905  EEKERTLKYL---SENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLI 961

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             LRD    H F E  CSC + W
Sbjct: 962  TLRDS---HRFNESICSCGEYW 980



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 176/408 (43%), Gaps = 74/408 (18%)

Query: 489 NSSRIQ-PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           N  R++ PDI+ WN  +S H  +G   + L +   M      P  SSVS        LR 
Sbjct: 40  NKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTM------PRRSSVSYNAMISGYLRN 93

Query: 548 LKYGRESHGYILRNGLDY----DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            K+       + RN  D     DL+    ++  YV+N  L +A+ +FD M  +++V+WNS
Sbjct: 94  SKFN------LARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS 147

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           L+SGY   G    A+++ + M E+    + +SWN L++ Y   G+ +EA ++     +  
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDW- 202

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              ++++W  L+ G ++ +   ++   F +M                             
Sbjct: 203 ---DLISWNCLMGGFVRKKKLGDARWLFDKMP---------------------------- 231

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
                      ++DA     +I  Y++ G L  AR +F +S  + + +W  M+ G+   G
Sbjct: 232 -----------VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNG 280

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
              EA   F E+ E     + +++ A++A    +  ++   + F+SM         I  +
Sbjct: 281 MLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCR-----NISSW 331

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           + M+   G+ G + +A  F   MP + D   W A++      GH E A
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYEEA 378



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 4/242 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + GD   A K F +   R    W++ +  Y    G  +E L ++ E+   G  
Sbjct: 333 TMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ-SGHYEEALNMFVEIKQDGES 391

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                    L  C  + A  LG ++H   +K G+     +  AL+  Y KC  ++ AN  
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDT 451

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + +D + WN ++    R+     A+ +F  M+ +  K    T+V +L AC+  G 
Sbjct: 452 FEGIEE-KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL 510

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
              G +    + K   +        C+I +  R  +LE A  +  +M      +SW +++
Sbjct: 511 LDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570

Query: 470 SS 471
            +
Sbjct: 571 GA 572


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/725 (35%), Positives = 403/725 (55%), Gaps = 29/725 (4%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            ENA++L    + S  +  ++T   +LQ CA + +F +GK++H  +  +++  + ++   L
Sbjct: 83   ENAMELICMCKKSELE--TKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKL 140

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP-- 495
            +S Y+    L+   RVFD+M+  N+  WN M+S Y  +G    +  LF  M    I+   
Sbjct: 141  VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 496  --------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                          D+I+WN ++SG+ ++G  +  L + + M  LG   + +++  VL  
Sbjct: 201  PESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 260

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                  L  G+  H   +++  +  +    +L+DMY K   L  A  VF+ M  RN+V+W
Sbjct: 261  CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
             S+I+GY   G    A K+L QME+E +K D+V+  S++   +  G       +  ++K 
Sbjct: 321  TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI----------KPNSTTMSSLLQ 711
            + +  N+    +L+    +  +   +   F  M  +DI          KP+S TM+ +L 
Sbjct: 381  NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLP 440

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             C  L  L+ GKEIH   L+NG+  D +VA  L+D+Y K G L  AR +F    +K L S
Sbjct: 441  ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            W  MI G+ ++G G EAI  F+E+ + G +PD ++F ++L AC +SGL+E+GW++F  M 
Sbjct: 501  WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             D+NI P +EHY+CMVDLL + G L +A++FI T+P  PDATIWGALL  CR +  +E A
Sbjct: 561  NDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELA 620

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E  + R+F+LEP NS  Y L+ N+ A + +WE+V+RLR  + + G++     SWI+I   
Sbjct: 621  EKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGK 680

Query: 952  VHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
            V++F S   + HP +  I   L  +  +MK+ G+ P T+    + DE +K   L  H+EK
Sbjct: 681  VNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEK 740

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA+ +GL+    R  IRV KN RVC DCH  AK+MS    REI LRD  RFHHF++G CS
Sbjct: 741  LAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCS 800

Query: 1071 CNDCW 1075
            C   W
Sbjct: 801  CRGFW 805



 Score =  176 bits (447), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 226/500 (45%), Gaps = 62/500 (12%)

Query: 215 AQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
           ++  K+G    S  + K ++   +E     SA + F     R    W+S +  Y S  G 
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVS-NGL 231

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            +  L ++ ++   G+      +  +L  C       LG  VH+  IK  F+  ++    
Sbjct: 232 TERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNT 291

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ Y KC D++ A ++F ++ +  + + W  +I    R+ + + AIKL ++M+    K 
Sbjct: 292 LLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKL 350

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               I  +L ACA+ G+   GK +H Y+  + +ESNL VCN L+ MY++   +E A  VF
Sbjct: 351 DVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVF 410

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            +M   ++ SWN+MI                       ++PD  T  C            
Sbjct: 411 STMVVKDIISWNTMI---------------------GELKPDSRTMAC------------ 437

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                                  VL A   L  L+ G+E HGYILRNG   D +V  +L+
Sbjct: 438 -----------------------VLPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           D+YVK   L  A+ +FD + ++++V+W  +I+GY   G    A    N+M +  I+PD V
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           S+ S++   S  G  ++     + MKN   I P +  +  ++    +  N  ++ +F   
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEF--- 591

Query: 694 MQQEDIKPNSTTMSSLLQTC 713
           ++   I P++T   +LL  C
Sbjct: 592 IETLPIAPDATIWGALLCGC 611


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/851 (30%), Positives = 442/851 (51%), Gaps = 68/851 (7%)

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            R    W++ ++   +  G   + + ++ E+  +G++     L   LK C+  MA  LG +
Sbjct: 176  RDVVSWTALIQGLVA-EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +HA   K G   D+ +  AL++ Y KC ++E A+K+F  + + ++D+ WN ++    +  
Sbjct: 235  MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPE-QNDVTWNVLLNGYAQRG 293

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
                 +KLF  M     K    T+  +L+ CA      +G+ IH  ++K   E N  +  
Sbjct: 294  DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             L+ MYS+      A  VF ++K  ++  W+++I+     G  + +  LF+         
Sbjct: 354  GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH--------- 404

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                                   L+R   +L   PN  ++  +L A T    L+YG+  H
Sbjct: 405  -----------------------LMRLGDTL---PNQYTICSLLSAATNTGNLQYGQSIH 438

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
              + + G + D+ V  +L+ MY+KN C+ +  +++++M +R++++WN+ +SG    G++ 
Sbjct: 439  ACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYD 498

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIHHMKNSGI------ 664
                +   M EE   P++ ++ S++   S      +G+   A +I + + ++        
Sbjct: 499  RPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALI 558

Query: 665  --------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                  ++ TWT +I+   Q     ++L +F QMQQE +KPN  
Sbjct: 559  DMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEF 618

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T++  L  C  L  L+ G+++H +  K+G + D +V + L+DMY+K G ++ A  +F   
Sbjct: 619  TLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL 678

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              +   +WN +I G+A  G G +A+  F  +L+ G  PD +TFT +L+AC + GLVEEG 
Sbjct: 679  IRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGK 738

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            ++F+SM  D+ I PT++H +CMVD+LG+ G  DE  DFI+ M    +A IW  +LG+ ++
Sbjct: 739  EHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKM 798

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H +L   E A+ +LF+L+P   ++Y L+ N+ A   RW+DV+R+R  M   GVK     S
Sbjct: 799  HNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCS 858

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            W++ +  VH F +    HP   EI+ +L  L  E+  + YVP T  V  ++ E EK + L
Sbjct: 859  WVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENL 918

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+E+LA+ + L+ T S   IR+ KN R+C DCH   K++S +  +EI +RD  RFHHF
Sbjct: 919  RFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHF 978

Query: 1065 REGECSCNDCW 1075
            + G CSCND W
Sbjct: 979  KNGACSCNDFW 989



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 156/631 (24%), Positives = 276/631 (43%), Gaps = 69/631 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C    +  +   +H  ++K   + D HL  +L+N Y KCR    A  + +++ D  
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD-R 176

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + W  +I   +      ++I LF+EMQ         T+   L+AC+   A   GKQ+H
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
               K  L  +L V + L+ +Y++  ++ELA+++F  M + N                  
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQN------------------ 278

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                             +TWN LL+G+   G    VL L   M  L  + N  +++ VL
Sbjct: 279 -----------------DVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVL 321

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
           +     + LK G+  H  I++ G + + ++G  L+DMY K     +A  VF  +K  +IV
Sbjct: 322 KGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIV 381

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALV 654
            W++LI+    +G    + K+ + M   +  P+  +  SL+S     G   +GQS  A V
Sbjct: 382 VWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACV 441

Query: 655 ---------------IIHHMKNSGIYP-----------NVVTWTSLISGSLQNENYRESL 688
                          +  +MKN  ++            ++++W + +SG      Y   L
Sbjct: 442 WKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPL 501

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
             F  M +E   PN  T  S+L +C  L  +  G+++H   +KN    + +V T LIDMY
Sbjct: 502 TIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMY 561

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
           +K   L+ A   F + + + L +W  +I  +A    G++A+  F ++ + G +P+  T  
Sbjct: 562 AKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLA 621

Query: 809 ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
             L+ C +   +E G +   SM      +  +   S +VD+  K G ++EA      +  
Sbjct: 622 GCLSGCSSLASLEGG-QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-I 679

Query: 869 KPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
           + D   W  ++     +G    A  A R + 
Sbjct: 680 RRDTIAWNTIICGYAQNGQGNKALTAFRMML 710



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 216/508 (42%), Gaps = 83/508 (16%)

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           S+K   +    ML+ CA   +    K IHG ++K  +  +  +   L+++Y++      A
Sbjct: 107 SSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYA 166

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             V   M D ++ SW ++I      G+ + +  LF +                       
Sbjct: 167 RLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE----------------------- 203

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                       MQ+ G  PN  +++  L+A +    L  G++ H    + GL  DL+VG
Sbjct: 204 ------------MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVG 251

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           ++L+D+Y K   ++ A ++F  M  +N V WN L++GY  +G      K+   M E ++K
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311

Query: 631 PDLVSWNSLVSG-----------------------------------YSIWGQSKEALVI 655
            +  +  +++ G                                   YS  G + +A+ +
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGV 371

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
              +K     P++V W++LI+   Q     ES+K F  M+  D  PN  T+ SLL     
Sbjct: 372 FKTIKK----PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            G LQ G+ IH    K GF  D  V+  L+ MY K+G +    +++    ++ L SWN  
Sbjct: 428 TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAY 487

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY----FDSMS 831
           + G    G     + +F+ +LE GF P+  TF ++L +C     V  G +       +  
Sbjct: 488 LSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL 547

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
            D N + T      ++D+  K  YL++A
Sbjct: 548 DDNNFVCT-----ALIDMYAKCMYLEDA 570



 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 203/479 (42%), Gaps = 74/479 (15%)

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           S +L+     R L   +  HG I+++ ++ D ++  SL+++Y K      A+ V   M +
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------------ 631
           R++V+W +LI G   +G   ++  +  +M+ E I P                        
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 632 -----------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                      DL   ++LV  Y+  G+ + A  +   M       N VTW  L++G  Q
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQ----NDVTWNVLLNGYAQ 291

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
             +    LK F  M + D+K N  T++++L+ C     L+ G+ IH L +K G+  + ++
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             GL+DMYSK G    A  VF+      +  W+ +I      G  +E+I LFH +     
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411

Query: 801 QPDAITFTALLAACKNSGLVEEG-------WKY-FDSMSTDYNIIPTI-----------E 841
            P+  T  +LL+A  N+G ++ G       WKY F++     N + T+           +
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTK 471

Query: 842 HYSCMV--DLLGKAGYLDEAWD---FIRTMP---------FKPDATIWGALLGSCRIHGH 887
            Y  MV  DL+    YL    D   + R +          F P+   + ++LGSC     
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFD 531

Query: 888 LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
           + Y       + K    +  N+ +   L+ M  +   +E    + + + V+ +  W+ I
Sbjct: 532 VHYGRQVHAHIIK-NQLDDNNF-VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVI 588



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 5/297 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           +S HA + K G  + +D  V  +L+  Y++ G      K +     R    W+++L    
Sbjct: 435 QSIHACVWKYG--FETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
             G      L ++  +  +G I        IL  C+ L     G +VHA +IK   D + 
Sbjct: 493 DCG-MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN 551

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  AL++ Y KC  +E A+  F+ +S + D   W  II    +  + E A+  FR+MQ 
Sbjct: 552 FVCTALIDMYAKCMYLEDADVAFNRLS-VRDLFTWTVIITNYAQTNQGEKALNYFRQMQQ 610

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              K    T+   L  C+ + +   G+Q+H  V KS   S++ V + L+ MY++   +E 
Sbjct: 611 EGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           A  +F+++   +  +WN++I  Y   G  + A + F  M    I PD +T+  +LS 
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 691 FIQMQQEDIKPNSTT---------MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
           F   + ED K N             SS+L+ C     L   K IH L +K+    D+++ 
Sbjct: 91  FEHQKTEDAKGNQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLW 150

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             L+++Y+K      AR V  K  ++ + SW  +I G    G   ++I LF E+   G  
Sbjct: 151 VSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM 210

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
           P+  T    L AC     ++ G K   + +    ++  +   S +VDL  K G ++ A  
Sbjct: 211 PNEFTLATGLKACSLCMALDLG-KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASK 269

Query: 862 FIRTMPFKPDATIWGALL 879
               MP + D T W  LL
Sbjct: 270 MFIGMPEQNDVT-WNVLL 286


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/747 (34%), Positives = 403/747 (53%), Gaps = 59/747 (7%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D L WN+ I   +RN   ++A+ +F  M   S+ + +     M+    +   F+  + + 
Sbjct: 48   DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYN----AMISGYLRNSKFNLARNL- 102

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
                    E +L   N +++ Y RN +L  A R+FD M + ++ SWNS++S Y   GYVD
Sbjct: 103  ---FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVD 159

Query: 480  VAWSLFNKM----------------NSSRIQP-----------DIITWNCLLSGHFTHGS 512
             A  +F+ M                ++ RI+            D+I+WNCL+ G      
Sbjct: 160  EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVS--VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
              +   L   M      P   ++S   ++    +   L   R     +       D++  
Sbjct: 220  LGDARWLFDKM------PVRDAISWNTMISGYAQGGGLSQARR----LFDESPTRDVFTW 269

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            T+++  YV+N  L  A+  FD M  +N V++N++I+GY      V  KKM    E  E  
Sbjct: 270  TAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGY------VQTKKMDIARELFESM 323

Query: 631  P--DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
            P  ++ SWN++++GY   G   +A      M       + V+W ++I+G  Q+ +Y E+L
Sbjct: 324  PCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR----DCVSWAAIIAGYAQSGHYEEAL 379

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
              F++++Q+    N  T    L TC  +  L+ GK+IH   +K G+    +V   L+ MY
Sbjct: 380  NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
             K G++  A + F     K + SWN M+ G+A +G G++A+ +F  +   G +PD IT  
Sbjct: 440  FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
             +L+AC ++GL++ G +YF SM+ DY +IPT +HY+CM+DLLG+AG L+EA D IR MPF
Sbjct: 500  GVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            +P A  WGALLG+ RIHG+ E  E A+  +FK+EP NS  Y L+ NL A S RW D +++
Sbjct: 560  QPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKM 619

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R  M ++GV+ V  +SW+++   +H FS     HP    IY  L  L  +M++ GYV  T
Sbjct: 620  RSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLT 679

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
            + V  D++EEEK  +L  H+EKLA+ +G++      PIRV+KN RVC DCH+A K++S +
Sbjct: 680  KLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKI 739

Query: 1049 RGREIFLRDGARFHHFREGECSCNDCW 1075
             GR I LRD  RFHHF EG CSC D W
Sbjct: 740  VGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  129 bits (325), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 189/431 (43%), Gaps = 23/431 (5%)

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           A + F L   +    W+S L  Y    G V E  EV+  +  K  I  + +L   +    
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYAQ-NGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGR 188

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
                   +E    L +   D+D+     LM  + + + +  A  LF ++  + D + WN
Sbjct: 189 --------IEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMP-VRDAISWN 239

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I    +      A +LF E    S      T   M+    + G   E K         
Sbjct: 240 TMISGYAQGGGLSQARRLFDE----SPTRDVFTWTAMVSGYVQNGMLDEAKTF----FDE 291

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
             E N    N +I+ Y +  K+++A  +F+SM   N+SSWN+MI+ Y  +G +  A   F
Sbjct: 292 MPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
           + M     Q D ++W  +++G+   G Y+  L +   ++  G   N ++    L    ++
Sbjct: 352 DMMP----QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
             L+ G++ HG  ++ G     +VG +L+ MY K   +  A + F+ ++ +++V+WN+++
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGI 664
           +GY   G    A  +   M+   +KPD ++   ++S  S  G         + M K+ G+
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 665 YPNVVTWTSLI 675
            P    +T +I
Sbjct: 528 IPTSKHYTCMI 538



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/457 (23%), Positives = 192/457 (42%), Gaps = 53/457 (11%)

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
           +KD ++  WN  IS++   G+ D A  +FN M     +   +++N ++SG+  +  +   
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMP----RRSSVSYNAMISGYLRNSKFNLA 99

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
             L   M      P     S  +     +R  + G     + L    + D+    SL+  
Sbjct: 100 RNLFDQM------PERDLFSWNVMLTGYVRNCRLGDARRLFDLMP--EKDVVSWNSLLSG 151

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY-------------------------CFK 611
           Y +N  +  A+EVFDNM  +N ++WN L++ Y                         C  
Sbjct: 152 YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLM 211

Query: 612 GLFVNAKKMLNQMEEEEIKP--DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
           G FV  KK+ +     +  P  D +SWN+++SGY+  G   +A  +           +V 
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR----DVF 267

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           TWT+++SG +QN    E+  FF +M +++    +  ++  +QT           +I    
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT--------KKMDIAREL 319

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            ++   ++      +I  Y + G++  AR+ F     +   SW  +I G+A  G+ +EA+
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379

Query: 790 LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
            +F E+ + G   +  TF   L+ C +   +E G K     +            + ++ +
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELG-KQIHGQAVKMGYGTGCFVGNALLAM 438

Query: 850 LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
             K G +DEA D    +  K D   W  +L     HG
Sbjct: 439 YFKCGSIDEANDTFEGIEEK-DVVSWNTMLAGYARHG 474



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 176/408 (43%), Gaps = 74/408 (18%)

Query: 489 NSSRIQ-PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           N  R++ PDI+ WN  +S H  +G   + L +   M      P  SSVS        LR 
Sbjct: 40  NKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTM------PRRSSVSYNAMISGYLRN 93

Query: 548 LKYGRESHGYILRNGLDY----DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            K+       + RN  D     DL+    ++  YV+N  L +A+ +FD M  +++V+WNS
Sbjct: 94  SKFN------LARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS 147

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           L+SGY   G    A+++ + M E+    + +SWN L++ Y   G+ +EA ++     +  
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDW- 202

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              ++++W  L+ G ++ +   ++   F +M                             
Sbjct: 203 ---DLISWNCLMGGFVRKKKLGDARWLFDKMP---------------------------- 231

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
                      ++DA     +I  Y++ G L  AR +F +S  + + +W  M+ G+   G
Sbjct: 232 -----------VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNG 280

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
              EA   F E+ E     + +++ A++A    +  ++   + F+SM         I  +
Sbjct: 281 MLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPC-----RNISSW 331

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           + M+   G+ G + +A  F   MP + D   W A++      GH E A
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYEEA 378



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 4/242 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + GD   A K F +   R    W++ +  Y    G  +E L ++ E+   G  
Sbjct: 333 TMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ-SGHYEEALNMFVEIKQDGES 391

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                    L  C  + A  LG ++H   +K G+     +  AL+  Y KC  ++ AN  
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDT 451

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + +D + WN ++    R+     A+ +F  M+ +  K    T+V +L AC+  G 
Sbjct: 452 FEGIEE-KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL 510

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
              G +    + K   +        C+I +  R  +LE A  +  +M      +SW +++
Sbjct: 511 LDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570

Query: 470 SS 471
            +
Sbjct: 571 GA 572


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 821

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/814 (31%), Positives = 435/814 (53%), Gaps = 81/814 (9%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL-KCALMNFYGKCRDVESANKLFSEVS 356
             ++L+LCT +       ++   +IK G  ++ HL +  L++ + K   +  A ++F  + 
Sbjct: 53   AVLLELCTSMKELH---QIIPLVIKNGL-YNEHLFQTKLVSLFSKYGSINEAARVFEPID 108

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            D + D L++ ++    +N   E A+     M++   K +      +L+ C        GK
Sbjct: 109  D-KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGK 167

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +IHG ++ ++  +N+     +++MY++  +                              
Sbjct: 168  EIHGQLITNSFAANVFAMTGVVNMYAKCRQ------------------------------ 197

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             +D A+ +F++M     + D+++WN +++G   +G  +  L L+  MQ  G RP+  ++ 
Sbjct: 198  -IDDAYKMFDRMP----ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             VL A  ++ LL  G+  HGY +R G    + + T+L DMY K   ++ A+ +FD M  +
Sbjct: 253  TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------------- 631
             +V+WNS++ GY   G    A  +  +M EE I P                         
Sbjct: 313  TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372

Query: 632  ----------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                      D+   NSL+S YS   +   A  I +++         V+W ++I G  QN
Sbjct: 373  KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR----THVSWNAMILGYAQN 428

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                E+L  F +M+   +KP+S TM S++     L + ++ K IH L +++   K+ +V 
Sbjct: 429  GRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT 488

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            T L+DMYSK G +  AR++F   +++ + +WN MI G+  +G G+ A+ LF ++ +   +
Sbjct: 489  TALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVE 548

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+ IT+ ++++AC +SGLV+EG ++F SM  DY + P+++HY  MVDLLG+AG + EAWD
Sbjct: 549  PNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWD 608

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            FI  MP  P  T++GA+LG+C+IH ++E  E A+++LF+L P     + L+ N+ A +++
Sbjct: 609  FIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSK 668

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            W  V  +R +M++ G+K     S +++   VH F +    HP +  IY  L  LV E+K 
Sbjct: 669  WSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKA 728

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
             GYVPDT  +  D++++ + ++L SH+EKLAI +GL+ T     I V KN RVC DCH A
Sbjct: 729  AGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNA 787

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KY+SLV GREI +RD  RFHHF+ G CSC D W
Sbjct: 788  TKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 218/484 (45%), Gaps = 71/484 (14%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            T +LK+C        G E+H  LI   F  +V     ++N Y KCR ++ A K+F  + 
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP 209

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D + WN II    +N   + A++L   MQ    +  S T+V +L A A VG    GK
Sbjct: 210 E-RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGK 268

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            IHGY +++     +++   L  MYS+   +E A  +FD M    + SWNSM+  Y   G
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328

Query: 477 YVDVAWSLFNKMNSSRIQPDIIT----------WNCLLSGHFTH--------GSYQNVLT 518
             + A ++F KM    I P  +T             L  G F H        GS  +V+ 
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMN 388

Query: 519 LLRGMQS---------------------------LGF---------------------RP 530
            L  M S                           LG+                     +P
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKP 448

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           +  ++  V+ A+ EL + ++ +  HG I+R+ LD +++V T+L+DMY K   +  A+++F
Sbjct: 449 DSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLF 508

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
           D + +R+++ WN++I GY   GL   A  + ++M++  ++P+ +++ S++S  S  G   
Sbjct: 509 DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVD 568

Query: 651 EALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           E L     MK   G+ P++  + +++    +    +E+  F   M    I P  T   ++
Sbjct: 569 EGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP---ISPGITVYGAM 625

Query: 710 LQTC 713
           L  C
Sbjct: 626 LGAC 629


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/651 (38%), Positives = 379/651 (58%), Gaps = 26/651 (3%)

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            E ++   N ++S Y++N  ++ A  +FD M   N  SWN M+++Y   G ++ A  LF  
Sbjct: 58   ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF-- 115

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELR 546
               S+   ++I+WNC++ G+      +N L   RG+   +  R   S  +++        
Sbjct: 116  --ESKADWELISWNCMMGGYVK----RNRLVDARGIFDRMPERDEVSWNTMISGYAQNGE 169

Query: 547  LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            LL+  R      +R     D++  T+++  YV+N  L  A+ VFD M  +N V+WN++I+
Sbjct: 170  LLEAQRLFEESPVR-----DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIA 224

Query: 607  GYCFKGLFVNAKKMLNQMEEEEIKP--DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
            GY      V  K+M    E  E  P  ++ SWN++++GY+  G   +A      M     
Sbjct: 225  GY------VQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQR-- 276

Query: 665  YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
              + ++W ++I+G  Q+    E+L  F++M+++  + N +T +S L TC  +  L+ GK+
Sbjct: 277  --DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQ 334

Query: 725  IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            +H   +K G     YV   L+ MY K GN+  A  VF     K + SWN MI G+A +G 
Sbjct: 335  VHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGF 394

Query: 785  GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
            GKEA++LF  + +TG  PD +T   +L+AC ++GLV++G +YF SM+ DY I    +HY+
Sbjct: 395  GKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYT 454

Query: 845  CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
            CM+DLLG+AG LD+A + ++ MPF+PDA  WGALLG+ RIHG+ E  E A++ +F++EP 
Sbjct: 455  CMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPD 514

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            NS  Y L+ NL A S RW DV R+R  M + GVK V  +SW+++   +H F+   + HP 
Sbjct: 515  NSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPE 574

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
               IY  L  L  +MKK GYV  T+ V  D++EEEK  +L  H+EKLA+ +G++   +  
Sbjct: 575  RDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGR 634

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            PIRVIKN RVC DCH A K++S + GR I LRD  RFHHF  G+CSC D W
Sbjct: 635  PIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 217/491 (44%), Gaps = 63/491 (12%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R    W++ L  Y    G V+E  E++ E+  K  I  + +L   ++           +E
Sbjct: 59  RDVVSWNAMLSGYAQ-NGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGR--------IE 109

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
               L +   D+++     +M  Y K   +  A  +F  + +  D++ WN +I    +N 
Sbjct: 110 DARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPE-RDEVSWNTMISGYAQNG 168

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
           +   A +LF E   S  + +  T   M+    + G   E ++    V     E N    N
Sbjct: 169 ELLEAQRLFEE---SPVRDVF-TWTAMVSGYVQNGMLDEARR----VFDGMPEKNSVSWN 220

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            +I+ Y +  +++ A  +F++M   N+SSWN+MI+ Y   G +  A + F++M     Q 
Sbjct: 221 AIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMP----QR 276

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D I+W  +++G+   G  +  L L   M+  G R N S+ +  L    E+  L+ G++ H
Sbjct: 277 DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVH 336

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
           G +++ GL+   YVG +L+ MY K   + +A  VF+ ++ + +V+WN++I+GY   G   
Sbjct: 337 GRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGK 396

Query: 616 NAKKMLNQMEEEEIKPDLVS--------------------WNSLVSGYSIWGQSKEALVI 655
            A  +   M++  I PD V+                    + S+   Y I   SK    +
Sbjct: 397 EALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCM 456

Query: 656 I-------------HHMKNSGIYPNVVTWTSLISGSLQNENY---RESLKFFIQMQQEDI 699
           I             + MKN    P+  TW +L+  S  + N     ++ K   +M+    
Sbjct: 457 IDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME---- 512

Query: 700 KPNSTTMSSLL 710
            P+++ M  LL
Sbjct: 513 -PDNSGMYVLL 522



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 45/284 (15%)

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME------------ 625
           V+   L+ A+ +FD M  R++V+WN+++SGY   G    AK++ ++M             
Sbjct: 41  VRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLA 100

Query: 626 ---------------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                          E +   +L+SWN ++ GY    +  +A  I   M       + V+
Sbjct: 101 AYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER----DEVS 156

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLC 729
           W ++ISG  QN    E+ + F +    D+   +  +S  +Q     G+L   + +   + 
Sbjct: 157 WNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQN----GMLDEARRVFDGMP 212

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            KN    +A +A      Y +   +  ARE+F     + ++SWN MI G+A  G+  +A 
Sbjct: 213 EKNSVSWNAIIAG-----YVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQAR 267

Query: 790 LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             F  +     Q D+I++ A++A    SG  EE    F  M  D
Sbjct: 268 NFFDRMP----QRDSISWAAIIAGYAQSGYGEEALHLFVEMKRD 307



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 109/242 (45%), Gaps = 4/242 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + GD   A   F     R    W++ +  Y    G  +E L ++ E+   G  
Sbjct: 252 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQ-SGYGEEALHLFVEMKRDGER 310

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                 T  L  C ++ A  LG +VH  ++K G +   ++  AL+  Y KC +++ A  +
Sbjct: 311 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + E  + WN +I    R+   + A+ LF  M+ +       T+V +L AC+  G 
Sbjct: 371 FEGIEEKE-VVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 429

Query: 412 FHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G +  +       + +N     C+I +  R  +L+ A  +  +M  + + ++W +++
Sbjct: 430 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489

Query: 470 SS 471
            +
Sbjct: 490 GA 491


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/725 (35%), Positives = 403/725 (55%), Gaps = 29/725 (4%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            ENA++L    Q S  +  ++T   +LQ CA + +F +GK++H  +  +++  + ++   L
Sbjct: 83   ENAMELICMCQKSELE--TKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKL 140

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP-- 495
            +S Y+    L+   RVFD+M+  N+  WN M+S Y  +G    +  LF  M    I+   
Sbjct: 141  VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 496  --------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                          D+I+WN ++SG+ ++G  +  L + + M  LG   + +++  VL  
Sbjct: 201  PESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 260

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                  L  G+  H   +++  +  +    +L+DMY K   L  A  VF+ M  RN+V+W
Sbjct: 261  CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
             S+I+GY   G    A K+L QME+E +K D+V+  S++   +  G       +  ++K 
Sbjct: 321  TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI----------KPNSTTMSSLLQ 711
            + +  N+    +L+    +  +   +   F  M  +DI          KP+S TM+ +L 
Sbjct: 381  NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLP 440

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             C  L  L+ GKEIH   L+NG+  D +VA  L+D+Y K G L  AR +F    +K L S
Sbjct: 441  ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            W  MI G+ ++G G EAI  F+E+ + G +PD ++F ++L AC +SGL+E+GW++F  M 
Sbjct: 501  WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 560

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             D+NI P +EHY+CMVDLL + G L +A++F+ T+P  PDATIWGALL  CR +  +E A
Sbjct: 561  NDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELA 620

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E  + R+F+LEP N+  Y L+ N+ A + +WE+V+RLR  + + G++     SWI+I   
Sbjct: 621  EKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGK 680

Query: 952  VHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
            V++F S   + HP +  I   L  +  +MK+ G+ P T+    + DE +K   L  H+EK
Sbjct: 681  VNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEK 740

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA+ +GL+    R  IRV KN RVC DCH  AK+MS    REI LRD  RFHHF++G CS
Sbjct: 741  LAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCS 800

Query: 1071 CNDCW 1075
            C   W
Sbjct: 801  CRGFW 805



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 226/500 (45%), Gaps = 62/500 (12%)

Query: 215 AQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
           ++  K+G    S  + K ++   +E     SA + F     R    W+S +  Y S  G 
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVS-NGL 231

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            +  L ++ ++   G+      +  +L  C       LG  VH+  IK  F+  ++    
Sbjct: 232 TERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNT 291

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ Y KC D++ A ++F ++ +  + + W  +I    R+ + + AIKL ++M+    K 
Sbjct: 292 LLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKL 350

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               I  +L ACA+ G+   GK +H Y+  + +ESNL VCN L+ MY++   +E A  VF
Sbjct: 351 DVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVF 410

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            +M   ++ SWN+MI                       ++PD  T  C            
Sbjct: 411 STMVVKDIISWNTMI---------------------GELKPDSRTMAC------------ 437

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                                  VL A   L  L+ G+E HGYILRNG   D +V  +L+
Sbjct: 438 -----------------------VLPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           D+YVK   L  A+ +FD + ++++V+W  +I+GY   G    A    N+M +  I+PD V
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           S+ S++   S  G  ++     + MKN   I P +  +  ++    +  N  ++ +F   
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEF--- 591

Query: 694 MQQEDIKPNSTTMSSLLQTC 713
           M+   I P++T   +LL  C
Sbjct: 592 METLPIAPDATIWGALLCGC 611


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 273/912 (29%), Positives = 460/912 (50%), Gaps = 93/912 (10%)

Query: 207  LSSVKSKHAQMIKMG-----KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADW 261
            L+  K+ H Q+IK G      +WNS      L+  Y + G    A K F     R    W
Sbjct: 144  LNEGKAIHGQVIKSGINPDSHLWNS------LVNVYAKCGSANYACKVFGEIPERDVVSW 197

Query: 262  SSFLEDY--ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHAS 319
            ++ +  +  E +G     L   + E+  +GV          LK C+  +    G +VHA 
Sbjct: 198  TALITGFVAEGYGSGAVNL---FCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAE 254

Query: 320  LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
             IK G   D+ +  AL++ Y KC ++  A ++F  +   ++ + WN ++    +    E 
Sbjct: 255  AIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPK-QNAVSWNALLNGFAQMGDAEK 313

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
             + LF  M  S       T+  +L+ CA  G    G+ +H   ++   E +  +  CL+ 
Sbjct: 314  VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            MYS+      A +VF  ++D                                   PD+++
Sbjct: 374  MYSKCGLAGDALKVFVRIED-----------------------------------PDVVS 398

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
            W+ +++     G  +    + + M+  G  PN  +++ ++ A T+L  L YG   H  + 
Sbjct: 399  WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVC 458

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY-----CFKGLF 614
            + G +YD  V  +L+ MY+K   +Q+   VF+   NR++++WN+L+SG+     C  GL 
Sbjct: 459  KYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGL- 517

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMK--------- 660
                ++ NQM  E   P++ ++ S++   S       G+   A ++ + +          
Sbjct: 518  ----RIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTAL 573

Query: 661  -----------------NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                             N  I  ++  WT +++G  Q+    +++K FIQMQ+E +KPN 
Sbjct: 574  VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNE 633

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             T++S L  C  +  L +G+++H + +K G   D +VA+ L+DMY+K G ++ A  VF  
Sbjct: 634  FTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDG 693

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              ++   SWN +I G++ +G G +A+  F  +L+ G  PD +TF  +L+AC + GL+EEG
Sbjct: 694  LVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEG 753

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             K+F+S+S  Y I PTIEHY+CMVD+LG+AG   E   FI  M    +  IW  +LG+C+
Sbjct: 754  KKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACK 813

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG++E+ E A+ +LF+LEP   +NY L+ N+ A    W+DV  +R  M   GVK     
Sbjct: 814  MHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGC 873

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            SW++++  VHVF +    HP   EI+ +L  L  ++  +GY P+T  V  ++ + EK ++
Sbjct: 874  SWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQEL 933

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+E+LA+ + L+ T +R  IR+ KN R+C DCH   K +S +  +E+ +RD   FHH
Sbjct: 934  LFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHH 993

Query: 1064 FREGECSCNDCW 1075
            F+ G CSC + W
Sbjct: 994  FKNGSCSCQNFW 1005



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 171/706 (24%), Positives = 309/706 (43%), Gaps = 77/706 (10%)

Query: 218 IKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQE 277
           I++  +  + D ++S    +  FGD  +        F ++ +  SS      + G ++ E
Sbjct: 50  IRLKSLSCALDAIESNPTGHWAFGDAQNLPVRLQDGFQKTPSKLSSPNRPNSTPGNKIPE 109

Query: 278 LLE---VWG--ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            +E   +W   +   KG   R R  + +L+ C        G  +H  +IK G + D HL 
Sbjct: 110 TVEKKRIWRGLDFDSKG---RLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLW 166

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L+N Y KC     A K+F E+ +  D + W  +I   +       A+ LF EM+    
Sbjct: 167 NSLVNVYAKCGSANYACKVFGEIPE-RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGV 225

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +A   T    L+AC+       GKQ+H   +K    S+L V + L+ +Y++  ++ LA R
Sbjct: 226 EANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAER 285

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VF  M   N  SWN++++ +  +G  +   +LF +M  S I     T + +L G    G+
Sbjct: 286 VFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGN 345

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                              L+ G+  H   +R G + D ++   
Sbjct: 346 -----------------------------------LRAGQIVHSLAIRIGCELDEFISCC 370

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+DMY K     +A +VF  +++ ++V+W+++I+    KG    A ++  +M    + P+
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430

Query: 633 LVSWNSLVS-----GYSIWGQSKEALV---------------IIHHMKNSGIYP------ 666
             +  SLVS     G   +G+S  A V               +  +MK   +        
Sbjct: 431 QFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE 490

Query: 667 -----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                ++++W +L+SG   NE     L+ F QM  E   PN  T  S+L++C  L  +  
Sbjct: 491 ATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 550

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           GK++H   +KN    + +V T L+DMY+K+  L+ A  +F +   + L +W  ++ G+A 
Sbjct: 551 GKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 610

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            G G++A+  F ++   G +P+  T  + L+ C     ++ G +   SM+        + 
Sbjct: 611 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMF 669

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
             S +VD+  K G +++A + +       D   W  ++     HG 
Sbjct: 670 VASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQHGQ 714



 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 138/290 (47%), Gaps = 13/290 (4%)

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
           KG     K +  Q+ +  I PD   WNSLV+ Y+  G +  A  +   +       +VV+
Sbjct: 141 KGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER----DVVS 196

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           WT+LI+G +       ++  F +M++E ++ N  T ++ L+ C     L+ GK++H   +
Sbjct: 197 WTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAI 256

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
           K G   D +V + L+D+Y+K G +  A  VF     +   SWN ++ GFA  G+ ++ + 
Sbjct: 257 KVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLN 316

Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY--SCMVD 848
           LF  +  +       T + +L  C NSG +  G +   S++    I   ++ +   C+VD
Sbjct: 317 LFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG-QIVHSLAI--RIGCELDEFISCCLVD 373

Query: 849 LLGKAGYLDEAWD-FIRTMPFKPDATIWGALLGSCRIHGH-LEYAEIASR 896
           +  K G   +A   F+R     PD   W A++      G   E AE+  R
Sbjct: 374 MYSKCGLAGDALKVFVRIE--DPDVVSWSAIITCLDQKGQSREAAEVFKR 421


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/728 (34%), Positives = 395/728 (54%), Gaps = 54/728 (7%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            RT   +LQ CA + +  +G++IH  +  + +E +  + + L+ MY     L    R+FD 
Sbjct: 102  RTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP--------------DIITWNC 502
            + +  +  WN +++ Y  +G    + SLF +M    I+               D+I+WN 
Sbjct: 162  VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221

Query: 503  LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
            ++SG+ ++G  +  L L   M  LG   + +++  V+   +   +L  GR  HGY ++  
Sbjct: 222  MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281

Query: 563  LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
               +L +   L+DMY K+  L +A +VF+ M  R++V+W S+I+GY  +GL   + ++ +
Sbjct: 282  FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341

Query: 623  QMEEEEIKPDLVSW-----------------------------------NSLVSGYSIWG 647
            +ME+E I PD+ +                                    N+L+  Y+  G
Sbjct: 342  EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401

Query: 648  QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
               +A  +   M+      ++V+W ++I G  +N    E+L  F++MQ    KPNS TM+
Sbjct: 402  SMGDAHSVFSEMQ----VKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMA 456

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
             +L  C  L  L+ G+EIH   L+NGF  D +VA  L+DMY K G L  AR +F     K
Sbjct: 457  CILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEK 516

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             L SW  MI G+ ++G G EAI  F+E+  +G +PD ++F ++L AC +SGL++EGW +F
Sbjct: 517  DLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF 576

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            + M  +  I P  EHY+C+VDLL +AG L +A+ FI+ MP +PDATIWGALL  CRI+  
Sbjct: 577  NMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHD 636

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            ++ AE  +  +F+LEP N+  Y L+ N+ A + +WE+V++LR  +   G++     SWI+
Sbjct: 637  VKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIE 696

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            I   VH+F    + HP   +I   L    + MK+ G+ P  R      D+ EK   L  H
Sbjct: 697  IKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGH 756

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EK+A+ +G++       +RV KN RVC DCH  AK+MS +  R+I LRD  RFHHF++G
Sbjct: 757  SEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDG 816

Query: 1068 ECSCNDCW 1075
             CSC   W
Sbjct: 817  SCSCRGHW 824



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 150/600 (25%), Positives = 251/600 (41%), Gaps = 121/600 (20%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD---------VHLKCA----------- 334
           R    +L+LC  L +   G  +H+ +     + D         +++ C            
Sbjct: 102 RTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161

Query: 335 -----------LMNFYGK------------------CRDVESANKLFSEVSDLEDDLLWN 365
                      LMN Y K                   R VESA KLF E+ D  D + WN
Sbjct: 162 VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGD-RDVISWN 220

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I   + N   E  + LF +M          T+V ++  C+  G    G+ +HGY +K+
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA 280

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
           +    L++ NCL+ MYS++  L  A +VF++M + ++ SW SMI+ Y   G  D++  LF
Sbjct: 281 SFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLF 340

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
           ++M    I PDI T                                   ++ +L A    
Sbjct: 341 HEMEKEGISPDIFT-----------------------------------ITTILHACACT 365

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
            LL+ G++ H YI  N +  DL+V  +LMDMY K   + +A  VF  M+ ++IV+WN++I
Sbjct: 366 GLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMI 425

Query: 606 SGYCFKGLFVNAKKMLNQMEEEE---------IKPDLVSWNSLVSGYSIWGQS-KEALVI 655
            GY    L   A  +  +M+            I P   S  +L  G  I G   +    +
Sbjct: 426 GGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSL 485

Query: 656 IHHMKNS------------------GIYP--NVVTWTSLISGSLQNENYRESLKFFIQMQ 695
             H+ N+                   + P  ++V+WT +I+G   +    E++  F +M+
Sbjct: 486 DRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMR 545

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI--KDAYVATGLIDMYSKSGN 753
              I+P+  +  S+L  C   GLL  G     +   N  I  K  + A  ++D+ +++GN
Sbjct: 546 NSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYAC-IVDLLARAGN 604

Query: 754 LKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           L  A +  +    +  A+ W  ++ G  IY + K A  +   + E   +P+   +  LLA
Sbjct: 605 LSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE--LEPENTGYYVLLA 662



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 140/272 (51%), Gaps = 3/272 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L+  Y + G+  SA + F     RS   W+S +  Y   G     +  ++ E+  +G+  
Sbjct: 292 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV-RLFHEMEKEGISP 350

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               +T IL  C        G +VH  + +     D+ +  ALM+ Y KC  +  A+ +F
Sbjct: 351 DIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVF 410

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
           SE+  ++D + WN +I    +N     A+ LF EMQ++S K  S T+  +L ACA + A 
Sbjct: 411 SEMQ-VKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAAL 468

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G++IHG++L++    +  V N L+ MY +   L LA  +FD + + +L SW  MI+ Y
Sbjct: 469 ERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY 528

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
              GY   A + FN+M +S I+PD +++  +L
Sbjct: 529 GMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 560



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 5/254 (1%)

Query: 218 IKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQE 277
           IK  K+ +   +  +L+  Y + G    A   F     +    W++ +  Y S      E
Sbjct: 378 IKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGY-SKNSLPNE 436

Query: 278 LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
            L ++ E+        S  +  IL  C  L A   G E+H  +++ GF  D H+  AL++
Sbjct: 437 ALNLFVEMQYNSKP-NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVD 495

Query: 338 FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
            Y KC  +  A  LF  + + +D + W  +I     +     AI  F EM+ S  +    
Sbjct: 496 MYLKCGALGLARLLFDMIPE-KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEV 554

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDS 456
           + + +L AC+  G   EG      +  +  +E       C++ + +R   L  A +    
Sbjct: 555 SFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKM 614

Query: 457 MK-DHNLSSWNSMI 469
           M  + + + W +++
Sbjct: 615 MPIEPDATIWGALL 628


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 886

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/829 (33%), Positives = 432/829 (52%), Gaps = 94/829 (11%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFD-VHLKCALMNFYGKCRDVESANKLFSEVSDL 358
            +LK    L    LG ++HA + K G+  D V +   L+N Y KC D  +  K+F  +S+ 
Sbjct: 99   LLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE- 157

Query: 359  EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEG 415
             + + WN +I      EKWE A++ FR M     +  S T+V +  AC+          G
Sbjct: 158  RNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMG 217

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            KQ+H Y L+   E N  + N L++MY +  KL               +S   ++ S+ G 
Sbjct: 218  KQVHAYGLRKG-ELNSFIINTLVAMYGKMGKL---------------ASSKVLLGSFEG- 260

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                D++TWN +LS    +  +   L  LR M   G  P+G ++
Sbjct: 261  -------------------RDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTI 301

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            S VL A + L +L+ G+E H Y L+NG LD + +VG++L+DMY     + +   VFD M 
Sbjct: 302  SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMF 361

Query: 595  NRNIVAWNSLISGYC-----------------FKGLFVNAKKMLNQME------------ 625
            +R I  WN++I+GY                    GL  N+  M   +             
Sbjct: 362  DRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKE 421

Query: 626  -------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                   +  +  D    N+L+  YS  G+   A  I   M++     ++VTW ++I+G 
Sbjct: 422  AIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDR----DLVTWNTIITGY 477

Query: 679  LQNENYRESLKFFIQMQ-----------QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            + +E + ++L    +MQ           +  +KPNS T+ ++L +C  L  L  GKEIH 
Sbjct: 478  VFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 537

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              +KN    D  V + L+DMY+K G L+ +R+VF +   + + +WN ++M + ++GN ++
Sbjct: 538  YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQD 597

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            AI +   ++  G +P+ +TF ++ AAC +SG+V EG K F +M  DY + P+ +HY+C+V
Sbjct: 598  AIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVV 657

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPD-ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            DLLG+AG + EA+  I  +P   D A  W +LLG+CRIH +LE  EIA++ L +LEP  +
Sbjct: 658  DLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVA 717

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            ++Y L+ N+ + +  W     +R +M   GV+     SWI+    VH F A  + HP + 
Sbjct: 718  SHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 777

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
            ++   L  L   M+K GY+PDT CV  +++E+EK  +L  H+EKLAI +G++ T     I
Sbjct: 778  KLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTII 837

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RV KN RVC+DCH A K++S V  REI LRD  RFHHF+ G CSC D W
Sbjct: 838  RVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 134/575 (23%), Positives = 253/575 (44%), Gaps = 84/575 (14%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W +++  K+R+     A+  + +M     K  +     +L+A A +     GKQIH +V 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 424 KSALE-SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
           K      +++V N L+++Y +        +VFD + + N  SWNS+ISS       ++A 
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
             F  M    ++P   T   L+S      ++                P G          
Sbjct: 181 EAFRCMLDEDVEPSSFT---LVSVALACSNFP--------------MPEG---------- 213

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
                L  G++ H Y LR G + + ++  +L+ MY K   L +++ +  + + R++V WN
Sbjct: 214 -----LLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWN 267

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS---IWGQSKEALVIIHHM 659
           +++S  C    F+ A + L +M  E ++PD  + +S++   S   +    KE  +  + +
Sbjct: 268 TVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKE--LHAYAL 325

Query: 660 KNSGIYPN-------------------------------VVTWTSLISGSLQNENYRESL 688
           KN  +  N                               +  W ++I+G  QNE   E+L
Sbjct: 326 KNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEAL 385

Query: 689 KFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
             FI+M++   +  NSTTM+ ++  C   G     + IH   +K G  +D +V   L+DM
Sbjct: 386 LLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDM 445

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH--ELLE-------- 797
           YS+ G +  A+ +F K  ++ L +WN +I G+      ++A+L+ H  ++LE        
Sbjct: 446 YSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERAS 505

Query: 798 -TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
               +P++IT   +L +C     + +G K   + +   N+   +   S +VD+  K G L
Sbjct: 506 RVSLKPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 564

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             +      +P + +   W  ++ +  +HG+ + A
Sbjct: 565 QMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQDA 598



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 151/655 (23%), Positives = 284/655 (43%), Gaps = 96/655 (14%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  HA + K G   +S  +  +L+  Y + GDF +  K F     R+   W+S +    S
Sbjct: 113 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 172

Query: 271 FGGEVQEL-LEVWGELHGKGVIFRSRILTIILKLCTKLM---AFWLGVEVHASLIKRGFD 326
           F  E  E+ LE +  +  + V   S  L  +   C+         +G +VHA  +++G +
Sbjct: 173 F--EKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-E 229

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            +  +   L+  YGK   + S+  L        D + WN ++    +NE++  A++  RE
Sbjct: 230 LNSFIINTLVAMYGKMGKLASSKVLLGSFEG-RDLVTWNTVLSSLCQNEQFLEALEYLRE 288

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNN 445
           M     +    TI  +L AC+ +     GK++H Y LK+ +L+ N  V + L+ MY    
Sbjct: 289 MVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 348

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
           ++    RVFD M D  +  WN+MI+ Y    Y + A  LF +M                 
Sbjct: 349 QVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEME---------------- 392

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
                             +S G   N ++++ V+ A             HG++++ GLD 
Sbjct: 393 ------------------ESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDR 434

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           D +V  +LMDMY +   +  A+ +F  M++R++V WN++I+GY F     +A  ML++M+
Sbjct: 435 DRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQ 494

Query: 626 EEE-----------IKPDLVSWNSLV---SGYSIWGQSKE--ALVIIHHMKNS------- 662
             E           +KP+ ++  +++   +  S   + KE  A  I +++          
Sbjct: 495 ILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 554

Query: 663 -GIYP------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             +Y                   NV+TW  ++     + N ++++     M  + +KPN 
Sbjct: 555 VDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNE 614

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK---DAYVATGLIDMYSKSGNLKSAREV 760
            T  S+   C   G++  G +I     K+  ++   D Y    ++D+  ++G +K A ++
Sbjct: 615 VTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYAC--VVDLLGRAGRVKEAYQL 672

Query: 761 FR---KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
                ++ +K   +W+ ++    I+ N +   +    L++   +P+  +   LLA
Sbjct: 673 INLIPRNFDKA-GAWSSLLGACRIHNNLEIGEIAAQNLIQ--LEPNVASHYVLLA 724



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 169/367 (46%), Gaps = 18/367 (4%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L + K  HA  +K G +  +  +  +L+  Y       S  + F   F R    W++ + 
Sbjct: 314 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMIT 373

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y     + + LL         G++  S  +  ++  C +  AF     +H  ++KRG D
Sbjct: 374 GYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLD 433

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D  ++ ALM+ Y +   ++ A ++F ++ D  D + WN II   + +E+ E+A+ +  +
Sbjct: 434 RDRFVQNALMDMYSRLGKIDIAKRIFGKMED-RDLVTWNTIITGYVFSERHEDALLMLHK 492

Query: 387 MQFSSAKAISR-----------TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
           MQ    KA  R           T++ +L +CA + A  +GK+IH Y +K+ L ++++V +
Sbjct: 493 MQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 552

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+ MY++   L+++ +VFD +   N+ +WN ++ +Y   G    A  +   M    ++P
Sbjct: 553 ALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKP 612

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           + +T+  + +     G     L +   M +  G  P+    + V+       L + GR  
Sbjct: 613 NEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDL-----LGRAGRVK 667

Query: 555 HGYILRN 561
             Y L N
Sbjct: 668 EAYQLIN 674


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/840 (32%), Positives = 429/840 (51%), Gaps = 115/840 (13%)

Query: 316  VHASLIKRGFDFD-VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
             H  L+ +G   D  H+    + F    + +    +L      +     WN++I   +  
Sbjct: 67   THQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPSSHTV---FWWNQLIRRSVHL 123

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
               E+ ++L+R MQ    +    T   +L+AC ++ +F  G  +H  V  S  E N+ V 
Sbjct: 124  GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 183

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N L+SMY R    E A +VFD M++              G+G                  
Sbjct: 184  NGLVSMYGRCGAWENARQVFDEMRER-------------GVG------------------ 212

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
             D+++WN +++ +   G     + +   M + LG RP+  S+  VL A   +     G++
Sbjct: 213  -DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 271

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR----------------- 596
             HGY LR+GL  D++VG +++DMY K   ++ A +VF+ MK +                 
Sbjct: 272  VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 331

Query: 597  ------------------NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
                              N+V W+++I+GY  +GL   A  +  QM     +P++V+  S
Sbjct: 332  FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVS 391

Query: 639  LVSGYSIWG---QSKEA-------------------LVIIHHMKN--------------- 661
            L+SG +  G     KE                    L++I+ + +               
Sbjct: 392  LLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMF 451

Query: 662  SGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNSTTMSSLLQTCGGL 716
              I P   +VVTWT LI G+ Q+    E+L+ F QM Q D  + PN+ T+S  L  C  L
Sbjct: 452  DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARL 511

Query: 717  GLLQNGKEIHCLCLKNGFIKDA-YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            G L+ G++IH   L+N F     +VA  LIDMYSKSG++ +AR VF     +   SW  +
Sbjct: 512  GALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSL 571

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            + G+ ++G G+EA+ +F+E+ +    PD +TF  +L AC +SG+V++G  YF+ M+ D+ 
Sbjct: 572  MTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFG 631

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            ++P  EHY+CMVDLL +AG LDEA + IR MP KP   +W ALL +CR++ ++E  E A+
Sbjct: 632  VVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAA 691

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
             +L +LE  N  +Y L+ N+ A +  W+DV R+R+ M   G+K     SW+Q  +    F
Sbjct: 692  NQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATF 751

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    HP + +IY  L  L+  +K LGYVPD R    D+D+EEKG +L  H+EKLA+ Y
Sbjct: 752  FAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAY 811

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            G++ T   APIR+ KN R C DCH+A  Y+S++   EI +RD +RFHHF+ G CSC   W
Sbjct: 812  GILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871



 Score =  222 bits (566), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 174/654 (26%), Positives = 304/654 (46%), Gaps = 77/654 (11%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF----LYFSRSYAD 260
           + L+S +  H Q++  G   +       +I  YL F    S AKA      L+ S     
Sbjct: 59  KSLASAELTHQQLLVQGLPHDP----THIISMYLTF---NSPAKALSVLRRLHPSSHTVF 111

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W + L       G ++++L+++  +   G          +LK C ++ +F  G  VHA +
Sbjct: 112 WWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVV 171

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWE 378
              GF+++V +   L++ YG+C   E+A ++F E+ +  + D + WN I+   ++     
Sbjct: 172 FASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSI 231

Query: 379 NAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            A+K+F  M      +  + ++V +L ACA VGA+  GKQ+HGY L+S L  ++ V N +
Sbjct: 232 RAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAV 291

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           + MY++   +E A +VF+ MK  ++ SWN+M++ Y+ +G  D A  LF K+   +I+ ++
Sbjct: 292 VDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNV 351

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
           +TW+ +++G+   G     L + R M   G  PN  ++  +L        L +G+E+H +
Sbjct: 352 VTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCH 411

Query: 558 ILR-------NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGY 608
            ++       N    DL V  +L+DMY K    + A+ +FD +  K+R++V W  LI G 
Sbjct: 412 AIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGN 471

Query: 609 CFKGLFVNAKKMLNQMEEEE--IKPD---------------------------------- 632
              G    A ++ +QM + +  + P+                                  
Sbjct: 472 AQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFES 531

Query: 633 --LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
             L   N L+  YS  G    A V+  +M       N V+WTSL++G   +    E+L+ 
Sbjct: 532 AMLFVANCLIDMYSKSGDVDAARVVFDNMHQR----NGVSWTSLMTGYGMHGRGEEALQI 587

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG------L 744
           F +MQ+  + P+  T   +L  C   G++  G         NG  KD  V  G      +
Sbjct: 588 FYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYF-----NGMNKDFGVVPGAEHYACM 642

Query: 745 IDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           +D+ S++G L  A E+ R    K T A W  ++    +Y N +      ++LLE
Sbjct: 643 VDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLE 696


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/730 (35%), Positives = 402/730 (55%), Gaps = 39/730 (5%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            ENA++L    Q S  +  ++T   +LQ CA   +  +GK++H  +  + +  +  +   L
Sbjct: 83   ENAMELVCMCQKSELE--TKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKL 140

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP-- 495
            +S+Y+    L+   RVFD+M+  N+  WN M+S Y  +G    +  LF  M    I+   
Sbjct: 141  VSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 496  --------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                          D+I+WN ++SG+ ++G  +  L + + M  LG   + +++  VL  
Sbjct: 201  PESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVG 260

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                  L  G+  H   +++  +  +    +L+DMY K   L  A  VF+ M  RN+V+W
Sbjct: 261  CANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
             S+I+GY   G    A ++L QME+E +K D+V+  S++   +  G       +  ++K 
Sbjct: 321  TSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKA 380

Query: 662  SGIYPNVVTWTSLIS-----GSLQNENYRESLKFFIQMQQEDI----------KPNSTTM 706
            + +  N+    +L+      GS+   N       F  M  +DI          KP+S TM
Sbjct: 381  NNMESNLFVCNALMDMYTKCGSMDGAN-----SVFSTMVVKDIISWNTMIGELKPDSRTM 435

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
            + +L  C  L  L+ GKEIH   L+NG+  D +VA  L+D+Y K G L  AR +F    +
Sbjct: 436  ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            K L SW  MI G+ ++G G EAI  F+E+ + G +PD ++F ++L AC +SGL+E+GW++
Sbjct: 496  KDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F  M  D+NI P +EHY+CMVDLL + G L +A++FI T+P  PDATIWGALL  CRI+ 
Sbjct: 556  FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYH 615

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
             +E AE  + R+F+LEP N+  Y L+ N+ A + +WE+V+R+R  + + G++     SWI
Sbjct: 616  DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWI 675

Query: 947  QIDQIVHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            +I   V++F S   + HP + +I   L  +  +MK+ GY P T+    + DE +K   L 
Sbjct: 676  EIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALC 735

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+EKLA+ +GL+    R  +RV KN RVC DCH  AK+MS    REI LRD  RFHHF+
Sbjct: 736  GHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFK 795

Query: 1066 EGECSCNDCW 1075
             G CSC   W
Sbjct: 796  NGYCSCRGFW 805



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 227/500 (45%), Gaps = 62/500 (12%)

Query: 215 AQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
           ++  K+G    S  + K ++   +E     SA++ F     R    W+S +  Y S  G 
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVS-NGL 231

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            +  LE++ ++   G+      +  +L  C       LG  VH+  IK  F+  ++    
Sbjct: 232 TERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNT 291

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ Y KC D++ A ++F ++ +  + + W  +I    R+ + + AI+L ++M+    K 
Sbjct: 292 LLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKL 350

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
                  +L ACA+ G+   GK +H Y+  + +ESNL VCN L+ MY++   ++ A  VF
Sbjct: 351 DVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVF 410

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            +M   ++ SWN+MI                       ++PD  T  C            
Sbjct: 411 STMVVKDIISWNTMI---------------------GELKPDSRTMAC------------ 437

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                                  +L A   L  L+ G+E HGYILRNG   D +V  +L+
Sbjct: 438 -----------------------ILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           D+YVK   L  A+ +FD + ++++V+W  +ISGY   G    A    N+M +  I+PD V
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           S+ S++   S  G  ++     + MKN   I P +  +  ++    +  N  ++ +F   
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEF--- 591

Query: 694 MQQEDIKPNSTTMSSLLQTC 713
           ++   I P++T   +LL  C
Sbjct: 592 IETLPIAPDATIWGALLCGC 611


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/843 (33%), Positives = 431/843 (51%), Gaps = 110/843 (13%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGF--DFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            +LK    +    LG ++HA + K G      V +  +L+N YGKC D+ +A ++F ++ D
Sbjct: 336  VLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPD 395

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV-GAFHEGK 416
              D + WN +I    R E+WE ++ LFR M   +    S T+V +  AC+ V G    GK
Sbjct: 396  -RDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGK 454

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            Q+H Y L                   RN  L   T              N++++ Y  LG
Sbjct: 455  QVHAYTL-------------------RNGDLRTYTN-------------NALVTMYARLG 482

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             V+ A +LF   +      D+++WN ++S    +  ++  L  +  M   G RP+G +++
Sbjct: 483  RVNDAKALFGVFDGK----DLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLA 538

Query: 537  VVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
             VL A ++L  L+ GRE H Y LRNG L  + +VGT+L+DMY      +  + VFD +  
Sbjct: 539  SVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVR 598

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKPDLVSW------------------ 636
            R +  WN+L++GY        A ++  +M  E E  P+  ++                  
Sbjct: 599  RTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEG 658

Query: 637  -----------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                             N+L+  YS  G+ + +  I   M       ++V+W ++I+G +
Sbjct: 659  IHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKR----DIVSWNTMITGCI 714

Query: 680  QNENYRESLKFFIQMQQ-------------ED-----IKPNSTTMSSLLQTCGGLGLLQN 721
                Y ++L    +MQ+             ED      KPNS T+ ++L  C  L  L  
Sbjct: 715  VCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGK 774

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            GKEIH   +K     D  V + L+DMY+K G L  A  VF +   + + +WN +IM + +
Sbjct: 775  GKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGM 834

Query: 782  YGNGKEAILLFHELLETG------FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            +G G+EA+ LF  +   G       +P+ +T+ A+ AAC +SG+V+EG   F +M   + 
Sbjct: 835  HGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHG 894

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF---KPDATIWGALLGSCRIHGHLEYAE 892
            + P  +HY+C+VDLLG++G + EA++ I TMP    K DA  W +LLG+CRIH  +E+ E
Sbjct: 895  VEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDA--WSSLLGACRIHQSVEFGE 952

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
            IA++ LF LEP  +++Y LM N+ + +  W+    +R  M E+GV+     SWI+    V
Sbjct: 953  IAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEV 1012

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            H F +  A HP + E++  L  L   M+K GYVPD  CV  ++D+EEK  +L  H+E+LA
Sbjct: 1013 HKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLA 1072

Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
            I +GL+ T     IRV KN RVC+DCH A K +S +  REI LRD  RFHHF  G CSC 
Sbjct: 1073 IAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCG 1132

Query: 1073 DCW 1075
            D W
Sbjct: 1133 DYW 1135



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/581 (24%), Positives = 254/581 (43%), Gaps = 90/581 (15%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W +++  +  +  + +AI  +  M  + A   +     +L+A A V     GKQIH +V 
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357

Query: 424 K--SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           K   A  S+++V N L++MY +   L  A +VFD + D +  SWNSMI++       +++
Sbjct: 358 KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             LF  M S  + P            FT  S  +  + +RG                   
Sbjct: 418 LHLFRLMLSENVDPT----------SFTLVSVAHACSHVRGG------------------ 449

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                 ++ G++ H Y LRNG D   Y   +L+ MY +   + +A+ +F     +++V+W
Sbjct: 450 ------VRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSW 502

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI-IHHMK 660
           N++IS       F  A   +  M  + ++PD V+  S++   S   + +    I  + ++
Sbjct: 503 NTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALR 562

Query: 661 NSGIYPN-------------------------------VVTWTSLISGSLQNENYRESLK 689
           N  +  N                               V  W +L++G  +NE   ++L+
Sbjct: 563 NGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALR 622

Query: 690 FFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
            F++M  E +  PN+TT +S+L  C    +  + + IH   +K GF KD YV   L+DMY
Sbjct: 623 LFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMY 682

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL----ETG----- 799
           S+ G ++ ++ +F +   + + SWN MI G  + G   +A+ L HE+     E G     
Sbjct: 683 SRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFV 742

Query: 800 ---------FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
                    F+P+++T   +L  C     + +G K   + +    +   +   S +VD+ 
Sbjct: 743 DYEDDGGVPFKPNSVTLMTVLPGCAALAALGKG-KEIHAYAVKQKLAMDVAVGSALVDMY 801

Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            K G L+ A      MP + +   W  L+ +  +HG  E A
Sbjct: 802 AKCGCLNLASRVFDQMPIR-NVITWNVLIMAYGMHGKGEEA 841



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 124/257 (48%), Gaps = 23/257 (8%)

Query: 289 GVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           GV F+   +T+  +L  C  L A   G E+HA  +K+    DV +  AL++ Y KC  + 
Sbjct: 749 GVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLN 808

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF--SSAKAISR----TIV 400
            A+++F ++  + + + WN +IM    + K E A++LFR M     S + + R    T +
Sbjct: 809 LASRVFDQMP-IRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYI 867

Query: 401 KMLQACAKVGAFHEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            +  AC+  G   EG  + H       +E       CL+ +  R+ +++ A  + ++M  
Sbjct: 868 AIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPS 927

Query: 460 --HNLSSWNSMISSYTGLGYVDVAWSL-FNKMNSSR---IQPDIITWNCLLSGHFTH-GS 512
             + + +W+S+      LG   +  S+ F ++ +     ++P++ +   L+S  ++  G 
Sbjct: 928 NLNKVDAWSSL------LGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGL 981

Query: 513 YQNVLTLLRGMQSLGFR 529
           +   L + + M+ +G R
Sbjct: 982 WDQALGVRKKMKEMGVR 998


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/822 (31%), Positives = 435/822 (52%), Gaps = 86/822 (10%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            ++ LK C +  +F +G  VH  L +     D     +L++ Y KC   E A  +F  +  
Sbjct: 70   SLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGS 129

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              D + W+ ++     N     A+  F +M  +             +AC+       G  
Sbjct: 130  SRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDS 189

Query: 418  IHGYVLKSA-LESNLSVCNCLISMYSRN-NKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            I G+V+K+  L+S++ V   LI M+ +    L  A +VF+ M + N  +W  MI+     
Sbjct: 190  IFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            GY   A  LF +M              +LSG                     + P+  ++
Sbjct: 250  GYAGEAIDLFLEM--------------ILSG---------------------YEPDRFTL 274

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDN 592
            S V+ A   + LL  G++ H   +R+GL  D  VG  L++MY K   +  +  A+++FD 
Sbjct: 275  SGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ 334

Query: 593  MKNRNIVAWNSLISGYC------------FKGLFVN--------------------AKKM 620
            + + N+ +W ++I+GY             F+G+ +                     A ++
Sbjct: 335  ILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRI 394

Query: 621  LNQMEEEEIKPDLVS----WNSLVSGYSIWGQ---SKEALVIIHHMKNSGIYPNVVTWTS 673
              Q+    +K    S     NSL+S Y+  G+   +++A  I+          N++++ +
Sbjct: 395  GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFE-------KNLISYNT 447

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I    +N N  E+L+ F +++ + +  ++ T +SLL     +G +  G++IH   +K+G
Sbjct: 448  VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSG 507

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
               +  V   LI MYS+ GN++SA +VF    ++ + SW  +I GFA +G   +A+ LFH
Sbjct: 508  LKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFH 567

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            ++LE G +P+ +T+ A+L+AC + GLV EGWK+F SM T++ +IP +EHY+CMVD+LG++
Sbjct: 568  KMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRS 627

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L EA  FI +MP+K DA +W   LG+CR+HG+LE  + A++ + + EP + A Y L+ 
Sbjct: 628  GSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLS 687

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            NL A +++W++V  +R +M E  +      SW++++  VH F      HP   EIY EL 
Sbjct: 688  NLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQ 747

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
            +L  ++KKLGYVP+   V  D++EE+K K+L  H+EK+A+ +GL+ T    PIRV KN R
Sbjct: 748  NLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLR 807

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +C DCH+A KY+S+  GREI +RD  RFHH ++G CSCN+ W
Sbjct: 808  ICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 225/488 (46%), Gaps = 45/488 (9%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           GD  SA K F     R+   W+  +     FG    E ++++ E+   G       L+ +
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFG-YAGEAIDLFLEMILSGYEPDRFTLSGV 277

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR---DVESANKLFSEVSD 357
           +  C  +    LG ++H+  I+ G   D  + C L+N Y KC     + +A K+F ++ D
Sbjct: 278 ISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILD 337

Query: 358 LEDDLLWNEIIMVKLRNEKW-ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             +   W  +I   ++   + E A+ LFR M  +       T    L+ACA + A   G+
Sbjct: 338 -HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+  + +K    S   V N LISMY+R+ +++ A + FD + + NL S+N++I +Y    
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  LFN++    +     T+  LLSG  + G+                        
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT------------------------ 492

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
                      +  G + H  ++++GL  +  V  +L+ MY +   +++A +VF++M++R
Sbjct: 493 -----------IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDR 541

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+++W S+I+G+   G    A ++ ++M EE ++P+LV++ +++S  S  G   E     
Sbjct: 542 NVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHF 601

Query: 657 HHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
             M    G+ P +  +  ++    ++ +  E+++F   M     K ++    + L  C  
Sbjct: 602 KSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMP---YKADALVWRTFLGACRV 658

Query: 716 LGLLQNGK 723
            G L+ GK
Sbjct: 659 HGNLELGK 666



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 215/494 (43%), Gaps = 73/494 (14%)

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           ++ ++ N +   AI     M    +    +T    L+ C +  +F  G  +H  + +S L
Sbjct: 38  LIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDL 97

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
           + +    N LIS+YS+  + E AT +F  M    +L SW++M+S +             N
Sbjct: 98  QLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFAN-----------N 146

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            M                        ++ +LT +  +++ G+ PN    +   +A +   
Sbjct: 147 NMG-----------------------FRALLTFVDMIEN-GYYPNEYCFAAATRACSTAE 182

Query: 547 LLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDC-LQNAQEVFDNMKNRNIVAWNSL 604
            +  G    G++++ G L  D+ VG  L+DM+VK    L +A +VF+ M  RN V W  +
Sbjct: 183 FVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLM 242

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHM 659
           I+     G    A  +  +M     +PD  + + ++S  +     + GQ   +  I H +
Sbjct: 243 ITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302

Query: 660 K-----------------------------NSGIYPNVVTWTSLISGSLQNENY-RESLK 689
                                         +  +  NV +WT++I+G +Q   Y  E+L 
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            F  M    + PN  T SS L+ C  L  L+ G+++    +K GF     VA  LI MY+
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA 422

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           +SG +  AR+ F     K L S+N +I  +A   N +EA+ LF+E+ + G    A TF +
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482

Query: 810 LLAACKNSGLVEEG 823
           LL+   + G + +G
Sbjct: 483 LLSGAASIGTIGKG 496



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 3/230 (1%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  SLI  Y   G    A KAF + F ++   +++ ++ Y       +E LE++ E+  +
Sbjct: 413 VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK-NLNSEEALELFNEIEDQ 471

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G+   +     +L     +     G ++HA +IK G   +  +  AL++ Y +C ++ESA
Sbjct: 472 GMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESA 531

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            ++F ++ D  + + W  II    ++     A++LF +M     +    T + +L AC+ 
Sbjct: 532 FQVFEDMED-RNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSH 590

Query: 409 VGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           VG  +EG K       +  +   +    C++ +  R+  L  A +  +SM
Sbjct: 591 VGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSM 640



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 89/217 (41%), Gaps = 3/217 (1%)

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
           + N    T  +   + N    +++     M  +   P+  T S  L+ C        G  
Sbjct: 28  FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR-KSANKTLASWNCMIMGFAIYG 783
           +H    ++    D+     LI +YSK G  + A  +F+   +++ L SW+ M+  FA   
Sbjct: 88  VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNN 147

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            G  A+L F +++E G+ P+   F A   AC  +  V  G   F  +     +   +   
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVG 207

Query: 844 SCMVDLLGKA-GYLDEAWDFIRTMPFKPDATIWGALL 879
             ++D+  K  G L  A+     MP + +A  W  ++
Sbjct: 208 CGLIDMFVKGRGDLVSAFKVFEKMP-ERNAVTWTLMI 243


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 290/933 (31%), Positives = 444/933 (47%), Gaps = 126/933 (13%)

Query: 233  LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY--ESFGGEVQELLEVWGELHGKGV 290
            LI  YL FGD   A   F     RS + W+     +  E   G V  L      +  K V
Sbjct: 103  LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFR---RMLTKNV 159

Query: 291  IFRSRILTIILKLCT-KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
             F  RI  ++L+ C+   ++F    ++HA  I  GF+    +   L++ Y K   + SA 
Sbjct: 160  EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219

Query: 350  KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            K+F  +    D + W  +I    +N   E A+ LF ++              +L AC KV
Sbjct: 220  KVFENLK-ARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKV 264

Query: 410  GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
              F  GKQ+HG VLK    S   VCN L+++YSR+  L  A ++F  M   +  S+NS+I
Sbjct: 265  EFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLI 324

Query: 470  SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN-------------- 515
            S     GY++ A +LF KMN    +PD +T   LLS   + G+  N              
Sbjct: 325  SGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMT 384

Query: 516  -------------------------------------VLTLLRGMQSLGFRPNGSSVSVV 538
                                                    +   MQ  G  PN  +   +
Sbjct: 385  SDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSI 444

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
            L+  T L     G + H  +L+ G  +++YV + L+DMY K+  L +A ++F  +K  ++
Sbjct: 445  LKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDV 504

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW---------------------- 636
            V+W ++I+GY     F  A  +  +M+++ IK D + +                      
Sbjct: 505  VSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQ 564

Query: 637  -------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYP-NVVTWTSLISGSLQNE 682
                         N+LVS Y+  G+ +EA           IY  + V+W SL+SG  Q+ 
Sbjct: 565  SCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQ-----IYAKDNVSWNSLVSGFAQSG 619

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
             + E+L  F QM +  ++ NS T  S +     +  ++ GK+IH +  K G+  +  V+ 
Sbjct: 620  YFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSN 679

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             LI +Y+K G +                SWN MI G++ +G G EA+ LF ++ +    P
Sbjct: 680  ALITLYAKCGTIDDI-------------SWNSMITGYSQHGCGFEALKLFEDMKQLDVLP 726

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + +TF  +L+AC + GLV+EG  YF SMS  +N++P  EHY+C+VDLLG++G L  A  F
Sbjct: 727  NHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRF 786

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            +  MP +PDA +W  LL +C +H +++  E A+  L +LEP +SA Y L+ N+ A+S +W
Sbjct: 787  VEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKW 846

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            +  +R R  M + GVK     SW+++D  VH F A    HP    IY  L  L     + 
Sbjct: 847  DCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAEN 906

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVP    +  D +  +K    + H+E+LAI +GL+   S  P+ V KN RVC DCH   
Sbjct: 907  GYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWI 966

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K++S +  R I +RD  RFHHF+ G CSC D W
Sbjct: 967  KHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 47/328 (14%)

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            Y G  L+D Y+    L  A  VFD M  R++  WN + + +  + L      +  +M  
Sbjct: 97  FYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLT 156

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIH---------------------HMKNS--- 662
           + ++ D   +  ++ G S    S   +  IH                     + KN    
Sbjct: 157 KNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLS 216

Query: 663 ---GIYPNV-----VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
               ++ N+     V+W ++ISG  QN    E++  F Q+              +L  C 
Sbjct: 217 SAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACT 262

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
            +   + GK++H L LK GF  + YV   L+ +YS+SGNL SA ++F   + +   S+N 
Sbjct: 263 KVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNS 322

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
           +I G A  G    A+ LF ++     +PD +T  +LL+AC + G +  G K F S +   
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG-KQFHSYAIKA 381

Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            +   I     ++DL  K   +  A +F
Sbjct: 382 GMTSDIVVEGSLLDLYVKCSDIKTAHEF 409


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 270/898 (30%), Positives = 450/898 (50%), Gaps = 79/898 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            HA  +  G    +D ++ +L+   Y + G    A + F    SR +  W + L  Y    
Sbjct: 66   HATSVVRG--LGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ-R 122

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G  +E   ++ ++H   VI    +L+ +L  CTK   F  G  +HA + K+ F  +  + 
Sbjct: 123  GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             AL+  Y      + A ++F ++    D + +N +I    +    E A+++F EMQ S  
Sbjct: 183  NALIALYLGFGSFKLAERVFCDML-FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +    T+  +L ACA VG   +GKQ+H Y+LK+ +  +      L+ +Y +   +E A  
Sbjct: 242  RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            +F+     N+  WN M+ +Y  +  +  ++ +F +M                        
Sbjct: 302  IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQM------------------------ 337

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                       Q+ G  PN  +   +L+  T    ++ G + H   ++NG + D+YV   
Sbjct: 338  -----------QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+DMY K  CL  A+++ + ++ R++V+W S+I+GY        A     +M++  + PD
Sbjct: 387  LIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446

Query: 633  LVS-----------------------------------WNSLVSGYSIWGQSKEALVIIH 657
             +                                    WN+LV+ Y+  G+S+EA  +  
Sbjct: 447  NIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFR 506

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
             +     + + +TW  LISG  Q+  Y ++L  F++M Q   K N  T  S +     L 
Sbjct: 507  EID----HKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLA 562

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             ++ GK++H   +K G   +  VA  LI +Y K G+++ A+ +F + + +   SWN +I 
Sbjct: 563  DIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIIT 622

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
              + +G G EA+ LF ++ + G +P+ +TF  +LAAC + GLVEEG  YF SMS  Y + 
Sbjct: 623  SCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLN 682

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P  +HY+C+VD+LG+AG LD A  F+  MP   +A IW  LL +C++H ++E  E+A++ 
Sbjct: 683  PIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKH 742

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L +LEP +SA+Y L+ N  A++ +W + +++R  M + G++     SWI++   VH F  
Sbjct: 743  LLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFV 802

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
                HP + +IY  L  L   + K+GY  +   ++ + ++E+K      H+EKLA+ +GL
Sbjct: 803  GDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGL 862

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            M      P+RVIKN RVC DCH+  K+ S V  REI LRD  RFHHF  G CSC D W
Sbjct: 863  MTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 148/622 (23%), Positives = 285/622 (45%), Gaps = 70/622 (11%)

Query: 297 LTIILKLCTKLMAFW-LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           LT  L+ C      W L +E+HA+ + RG   D  +   L++ Y K   V  A ++F E+
Sbjct: 45  LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
           S   D + W  ++    +    + A +L+ +M +++       +  +L AC K   F +G
Sbjct: 105 SS-RDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQG 163

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           + IH  V K A  S   V N LI++Y      +LA RVF  M   +  ++N++IS +   
Sbjct: 164 RMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQC 223

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G+ + A  +F++M  S ++PD +T                                   V
Sbjct: 224 GHGECALQIFDEMQLSGLRPDCVT-----------------------------------V 248

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           + +L A   +  L+ G++ H Y+L+ G+ +D     SL+D+YVK   ++ A ++F+    
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDR 308

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV-----SGYSIWGQSK 650
            N+V WN ++  Y        + ++  QM+   I P+  ++  ++     +G    G+  
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQI 368

Query: 651 EALVIIH----HMKNSGIY----------------------PNVVTWTSLISGSLQNENY 684
            +L I +     M  SG+                        +VV+WTS+I+G +Q++  
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFC 428

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
            E+L  F +MQ   + P++  ++S    C G+  ++ G +IH     +G+  D  +   L
Sbjct: 429 EEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTL 488

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           +++Y++ G  + A  +FR+  +K   +WN +I GF      ++A+++F ++ + G + + 
Sbjct: 489 VNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNV 548

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            TF + ++A  N   +++G K     +         E  + ++ L GK G +++A     
Sbjct: 549 FTFISAISALANLADIKQG-KQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFS 607

Query: 865 TMPFKPDATIWGALLGSCRIHG 886
            M  + + + W  ++ SC  HG
Sbjct: 608 EMSLRNEVS-WNTIITSCSQHG 628



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 702 NSTTMSSLLQTCGGLG-----LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            S  ++  LQ C G G     +L    EIH   +  G   D  +   LID+Y+K+G +  
Sbjct: 41  GSADLTCALQACRGRGNRWPLVL----EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQ 96

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           AR+VF++ +++   SW  M+ G+A  G GKEA  L+ ++  T   P     +++L+AC  
Sbjct: 97  ARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK 156

Query: 817 SGLVEEG 823
             L  +G
Sbjct: 157 GKLFAQG 163


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 821

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/814 (31%), Positives = 433/814 (53%), Gaps = 81/814 (9%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL-KCALMNFYGKCRDVESANKLFSEVS 356
             ++L+LCT +       ++   +IK G  ++ HL +  L++ + K   +  A ++F  + 
Sbjct: 53   AVLLELCTSMKELH---QIIPLVIKNGL-YNEHLFQTKLVSLFSKYGSINEAARVFEPID 108

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            D + D L++ ++    +N   E A+     M++   K +      +L+ C        GK
Sbjct: 109  D-KLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGK 167

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +IHG ++ ++  +N+     +++MY++  +                              
Sbjct: 168  EIHGQLITNSFAANVFAMTGVVNMYAKCRQ------------------------------ 197

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             +D A+ +F++M     + D+++WN +++G   +G  +  L L+  MQ  G RP+  ++ 
Sbjct: 198  -IDDAYKMFDRMP----ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             VL A  ++ LL  G+  HGY +R G    + + T+L DMY K   ++ A+ +FD M  +
Sbjct: 253  TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------------- 631
             +V+WNS++ GY   G    A  +  +M EE I P                         
Sbjct: 313  TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372

Query: 632  ----------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                      D+   NSL+S YS   +   A  I +++         V+W ++I G  QN
Sbjct: 373  KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR----THVSWNAMILGYAQN 428

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                E+L  F +M+   +KP+S TM S++     L + ++ K IH L +++   K+ +V 
Sbjct: 429  GRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT 488

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            T L+DMYSK G +  AR++F   +++ + +WN MI G+  +G G+ A+ LF ++ +   +
Sbjct: 489  TALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVE 548

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+ IT+ ++++AC +SGLV+EG ++F SM  DY + P+++HY  MVDLLG+AG + EAWD
Sbjct: 549  PNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWD 608

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            FI  MP  P  T++GA  G+C+IH ++E  E A+++LF+L P     + L+ N+ A +++
Sbjct: 609  FIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSK 668

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            W  V  +R +M++ G+K     S +++   VH F +    HP +  IY  L  LV E+K 
Sbjct: 669  WSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKA 728

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
             GYVPDT  +  D++++ + ++L SH+EKLAI +GL+ T     I V KN RVC DCH A
Sbjct: 729  AGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNA 787

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KY+SLV GREI +RD  RFHHF+ G CSC D W
Sbjct: 788  TKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 216/484 (44%), Gaps = 71/484 (14%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            T +LK+C        G E+H  LI   F  +V     ++N Y KCR ++ A K+F  + 
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP 209

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D + WN II    +N   + A++L   MQ    +  S T+V +L A A VG    GK
Sbjct: 210 E-RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGK 268

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            IHGY +++     +++   L  MYS+   +E A  +FD M    + SWNSM+  Y   G
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328

Query: 477 YVDVAWSLFNKMNSSRIQPDIIT----------WNCLLSGHFTH--------GSYQNVLT 518
             + A ++F KM    I P  +T             L  G F H        GS  +V+ 
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMN 388

Query: 519 LLRGMQS---------------------------LGF---------------------RP 530
            L  M S                           LG+                     +P
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKP 448

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           +  ++  V+ A+ EL + ++ +  HG I+R+ LD +++V T+L+DMY K   +  A+++F
Sbjct: 449 DSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLF 508

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
           D + +R+++ WN++I GY   GL   A  + ++M++  ++P+ +++ S++S  S  G   
Sbjct: 509 DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVD 568

Query: 651 EALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           E L     MK   G+ P++  + +++    +    +E+  F   M    I P  T   + 
Sbjct: 569 EGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP---ISPGITVYGAX 625

Query: 710 LQTC 713
              C
Sbjct: 626 XGAC 629


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Cucumis sativus]
          Length = 797

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/825 (33%), Positives = 422/825 (51%), Gaps = 95/825 (11%)

Query: 301  LKLC--TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS-- 356
            L LC    L ++ L   VH  +I  GF    H+   L++ Y K  D   A KLF E+   
Sbjct: 18   LNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQP 77

Query: 357  ------------------------------DLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
                                          D+ D + +N +I          +AI+LFR 
Sbjct: 78   DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFHEGKQ---IHGYVLKSALESNLSVCNCLISMYSR 443
            M++++ +    T   +L A   +  F++ +Q   +HG V+K  +E   +V N L+S+Y +
Sbjct: 138  MRWANFQPDDFTFASVLSASTLI--FYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVK 195

Query: 444  ---------NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
                     ++ +  A ++FD M   N   W ++I+ Y   G +  A  + + M     Q
Sbjct: 196  CASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTE---Q 252

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P I  WN ++SG+  HG +++ LTL R M+ LG + + S+ + V+ A  +      G++ 
Sbjct: 253  PGI-AWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQV 311

Query: 555  HGYILRNGL----DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            H YIL+N L    D+ L VG +L+ +Y K   +  A+++F  M  +              
Sbjct: 312  HAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-------------- 357

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                                 D+++WN+L+SGY   G+ +EA      M       N++T
Sbjct: 358  ---------------------DIITWNTLLSGYVNAGRMEEAKSFFAQMPEK----NLLT 392

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            WT +ISG  QN    ++LK F QM+ +  +PN    +  +  C  LG L+NG+++H   +
Sbjct: 393  WTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIV 452

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
              G      V   +I MY++ G +++AR +F         SWN MI     +G+G +AI 
Sbjct: 453  HLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIE 512

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            L+ ++L+ G  PD  TF  +L+AC ++GLVEEG +YF+SM  +Y I P  +HY+ M+DL 
Sbjct: 513  LYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLF 572

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
             +AG   +A + I +MPF+  A IW ALL  CR HG+++    A+ +LFKL P +   Y 
Sbjct: 573  CRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYV 632

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A   RW DV R R  M + GVK     SW +++  VHVF  +   HP    IY 
Sbjct: 633  LLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYN 692

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L  EMKK+GY+PDT+ V  D++ E K   L +H+EKLA+ +GLMK    A +RV K
Sbjct: 693  YLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFK 752

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R+C DCH A K+MS V GREI +RDG RFHHF+ GECSC + W
Sbjct: 753  NLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/329 (20%), Positives = 131/329 (39%), Gaps = 49/329 (14%)

Query: 189 SCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV---KSLIFHYLEFGDFTS 245
           +C   GF  L            K  HA ++K     + D ++    +LI  Y ++G    
Sbjct: 298 ACADGGFFLLG-----------KQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDG 346

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI-------------F 292
           A K F+    +    W++ L  Y +  G ++E    + ++  K ++             F
Sbjct: 347 ARKIFYEMPVKDIITWNTLLSGYVN-AGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGF 405

Query: 293 RSRILTII--LKL----------------CTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
             + L +   +KL                C+ L A   G ++HA ++  G D  + +  A
Sbjct: 406 GEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNA 465

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           ++  Y +C  VE+A  +F  +    D + WN +I    ++     AI+L+ +M       
Sbjct: 466 MITMYARCGIVEAARTMFLTMP-FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILP 524

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRV 453
             RT + +L AC+  G   EG +    +L++  +         +I ++ R  K   A  V
Sbjct: 525 DRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNV 584

Query: 454 FDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
            DSM  +     W ++++     G +D+ 
Sbjct: 585 IDSMPFEARAPIWEALLAGCRTHGNMDLG 613


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/898 (30%), Positives = 454/898 (50%), Gaps = 79/898 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            HA+ I  G     D +  +L+   Y + G    A + F    +R    W + L  Y +  
Sbjct: 65   HAKAITCG--LGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGY-ARN 121

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G  +E + ++ ++H  GV+    +L+ +L  CTK   F  G  VHA + K+G   +  + 
Sbjct: 122  GLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVG 181

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             AL+  Y +   +  A ++FSE+    D + +N +I    +    E+A+++F EM+ S  
Sbjct: 182  NALIALYLRFGSLSLAERVFSEMPYC-DRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                 TI  +L ACA +G  ++GKQ+H Y+LK+ +  +  +   L+ +Y +   +  A  
Sbjct: 241  TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            +F S    N+  WN M+ +Y  +  +  ++ LF +M ++                     
Sbjct: 301  IFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAA--------------------- 339

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                          G RPN  +   +L+  T    +  G + H   ++ G + D+YV   
Sbjct: 340  --------------GVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGV 385

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+DMY K   L  A+ + + ++ +++V+W S+I+GY        A +    M+   I PD
Sbjct: 386  LIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPD 445

Query: 633  LVS-----------------------------------WNSLVSGYSIWGQSKEALVIIH 657
             +                                    WN+LV+ Y+  G+SKEA  +  
Sbjct: 446  NIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFE 505

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
             ++    + + +TW  ++SG  Q+  Y E+L+ FI+M Q  +K N  T  S +     L 
Sbjct: 506  AIE----HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLA 561

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             ++ GK+IH   +K G   +  VA  LI +Y K G+++ A+  F + + +   SWN +I 
Sbjct: 562  DIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIIT 621

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
              + +G G EA+ LF ++ + G +P+ +TF  +LAAC + GLVEEG  YF SMS+++ I 
Sbjct: 622  SCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIH 681

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P  +HY+C+VD+LG+AG LD A  F+  MP   +A +W  LL +CR+H ++E  E+A++ 
Sbjct: 682  PRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKY 741

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L +LEP +SA+Y L+ N  A++ +W   + +R  M + GV+     SWI++  +VH F  
Sbjct: 742  LLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFV 801

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
                HP   +IY  L  L   + K+GY+     ++ + ++E+K      H+EKLA+ +GL
Sbjct: 802  GDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGL 861

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            M      P+RVIKN RVC+DCHT  K+ S V GREI LRD  RFHHF  G CSC D W
Sbjct: 862  MSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  201 bits (510), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 155/622 (24%), Positives = 274/622 (44%), Gaps = 78/622 (12%)

Query: 301 LKLCTKLMAFWLGVEV-HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           L+ C   +  W  V V HA  I  G   D      L++ Y K   V+ A ++F ++S   
Sbjct: 48  LRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLS-AR 106

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D++ W  ++    RN   E A+ L+ +M  S        +  +L AC K   F +G+ +H
Sbjct: 107 DNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVH 166

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             V K    S   V N LI++Y R   L LA RVF  M   +  ++N++IS +   G  +
Sbjct: 167 AQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGE 226

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  +F +M  S   PD +T                                   ++ +L
Sbjct: 227 SALEIFEEMRLSGWTPDCVT-----------------------------------IASLL 251

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A   +  L  G++ H Y+L+ G+  D  +  SL+D+YVK   +  A E+F +    N+V
Sbjct: 252 AACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVV 311

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL-------------------- 639
            WN ++  Y        +  +  QM    ++P+  ++  L                    
Sbjct: 312 LWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLS 371

Query: 640 ----------VSG-----YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                     VSG     YS +G   +A  I+  ++      +VV+WTS+I+G +Q+E  
Sbjct: 372 IKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK----DVVSWTSMIAGYVQHEFC 427

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
           +E+L+ F  MQ   I P++  ++S +  C G+  ++ G++IH     +G+  D  +   L
Sbjct: 428 KEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNAL 487

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           +++Y++ G  K A  +F    +K   +WN M+ GFA  G  +EA+ +F ++ + G + + 
Sbjct: 488 VNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNV 547

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            TF + ++A  N   +++G K   +           E  + ++ L GK G +++A     
Sbjct: 548 FTFVSSISASANLADIKQG-KQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFF 606

Query: 865 TMPFKPDATIWGALLGSCRIHG 886
            M  +   + W  ++ SC  HG
Sbjct: 607 EMSERNHVS-WNTIITSCSQHG 627



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC-GGLGLLQNGKEIHCLCLKNG 733
           ++G L +E+  + L  F    ++     S   +  L+ C G +        IH   +  G
Sbjct: 13  LTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCG 72

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
             +D      LID+Y+K G ++ AR VF + + +   SW  M+ G+A  G G+EA+ L+H
Sbjct: 73  LGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYH 132

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEG 823
           ++  +G  P     +++L+AC  + L E+G
Sbjct: 133 QMHCSGVVPTPYVLSSVLSACTKAALFEQG 162


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein At3g03580-like
            [Cucumis sativus]
          Length = 895

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/811 (31%), Positives = 428/811 (52%), Gaps = 77/811 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            ++  C +++   LG  VH   ++ GF+ D+++  AL++ Y +  D+++A  +F E+S+  
Sbjct: 127  VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN-R 185

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D + WN +I     N  WE+A+ ++ + + +       T+  +L AC  + A  EG  +H
Sbjct: 186  DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVH 245

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G + K  +  ++ + N L+SMY +  +L  A RVF  M                      
Sbjct: 246  GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMA--------------------- 284

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            D +TWN ++ G+   G ++  + L   M   GF P+  S++  +
Sbjct: 285  --------------VKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            +A  +   L+ G+  H Y++ +G + D      L+DMY K   L  AQEVFD  K ++ V
Sbjct: 330  RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------------------- 636
             WNSLI+GY   G +    +    M+ E  KPD V++                       
Sbjct: 390  TWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDV 448

Query: 637  ------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                        NSL+  Y+  G+  + L +  +M       ++++W ++I+ S+  ++ 
Sbjct: 449  IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH----DIISWNTVIASSVHFDDC 504

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
                +   +M+ E + P+  T+  +L  C  L + + GKEIH    K+GF  +  +   L
Sbjct: 505  TVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNAL 564

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            I+MYSK G+L++  +VF+    K + +W  +I  F +YG GK+A+  F ++  +G  PD+
Sbjct: 565  IEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDS 624

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            + F A + AC +SG+V+EG ++FD M TDYN+ P +EHY+C+VDLL ++G L +A +FI 
Sbjct: 625  VAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFIL 684

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            +MP KPDA++WGALL +CR  G+   A+  S+++ +L   ++  Y L+ N+ A   +W+ 
Sbjct: 685  SMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQ 744

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V+ +R+SM   G+K     SWI+I + V+VF           ++   L +LV  M K GY
Sbjct: 745  VKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGY 804

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            V D +    D++E++K  +L  H+E+LAI +GL+ TK  +P+ V+KN RVC DCHT  KY
Sbjct: 805  VADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKY 864

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++ +  REI +RD  RFH F++G CSC D W
Sbjct: 865  ITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/608 (24%), Positives = 256/608 (42%), Gaps = 80/608 (13%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VH+ +I  G    V     L++ Y + +D  S+  +F  +S   +  LWN II     N 
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +  A+  + EM+    +  + T   ++ +CA++     G  +H + ++   ES+L + N
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            LI MYSR   L+ A  VF+ M + +  SWNS+IS Y   G+ + A  +++K   + + P
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D  T                                   +S VL A   L  +K G   H
Sbjct: 221 DCFT-----------------------------------MSSVLLACGSLMAVKEGVAVH 245

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
           G I + G+  D+ +G  L+ MY K + L+ A+ VF  M  ++ V WN++I GY   G   
Sbjct: 246 GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHE 305

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV------- 668
            + K+   M +  + PD++S  S +      G  +    +  ++  SG   +        
Sbjct: 306 ASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILI 364

Query: 669 ------------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                   VTW SLI+G  Q+  Y+E L+ F  M+ E  KP+S 
Sbjct: 365 DMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSV 423

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T   LL     L  +  G+ IHC  +K GF  +  +   L+D+Y+K G +    +VF   
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC-----KNSGL 819
           +   + SWN +I     + +      + +E+   G  PD  T   +L  C     +  G 
Sbjct: 484 SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
              G+ +     ++  I       + ++++  K G L+      + M  K D   W AL+
Sbjct: 544 EIHGYIFKSGFESNVPI------GNALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALI 596

Query: 880 GSCRIHGH 887
            +  ++G 
Sbjct: 597 SAFGMYGE 604



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 152/623 (24%), Positives = 268/623 (43%), Gaps = 85/623 (13%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H   ++MG  + SD  +  +LI  Y  F D  +A   F    +R    W+S +  Y S  
Sbjct: 144 HEHAMEMG--FESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCS-N 200

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  ++ L+++ +    G++     ++ +L  C  LMA   GV VH  + K G   DV + 
Sbjct: 201 GFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIG 260

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L++ Y K   +  A ++FS+++ ++D + WN +I    +  + E ++KLF +M     
Sbjct: 261 NGLLSMYFKFERLREARRVFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV 319

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
             +  +I   ++AC + G    GK +H Y++ S  E +   CN LI MY++   L  A  
Sbjct: 320 PDM-LSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQE 378

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VFD+ K  +  +WNS+I+ YT  GY       F  M   R +PD +T+  LLS       
Sbjct: 379 VFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLS------- 430

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                         ++L  +  GR  H  +++ G + +L +G S
Sbjct: 431 ----------------------------IFSQLADINQGRGIHCDVIKFGFEAELIIGNS 462

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+D+Y K   + +  +VF  M   +I++WN++I+            +M+N+M  E + PD
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPD 522

Query: 633 LVS-----------------------------------WNSLVSGYSIWGQSKEALVIIH 657
             +                                    N+L+  YS  G  +  + +  
Sbjct: 523 EATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFK 582

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
           +MK      +VVTWT+LIS        +++LK F  M+   + P+S    + +  C   G
Sbjct: 583 YMKEK----DVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSG 638

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNC 774
           +++ G       +K  +  +  +     ++D+ ++SG L  A E       K  AS W  
Sbjct: 639 MVKEGLRFFDR-MKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGA 697

Query: 775 MIMGFAIYGNGKEAILLFHELLE 797
           ++      GN   A  +  ++LE
Sbjct: 698 LLSACRARGNTNIAQRVSKKILE 720



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/331 (21%), Positives = 146/331 (44%), Gaps = 10/331 (3%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  +IK G  + ++ ++  SL+  Y + G+     K F    +     W++ +     F 
Sbjct: 445 HCDVIKFG--FEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFD 502

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            +     ++  E+  +G++     +  IL +C+ L     G E+H  + K GF+ +V + 
Sbjct: 503 -DCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIG 561

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  Y KC  +E+  K+F  + + +D + W  +I       + + A+K F++M+ S  
Sbjct: 562 NALIEMYSKCGSLENCIKVFKYMKE-KDVVTWTALISAFGMYGEGKKALKAFQDMELSGV 620

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELAT 451
              S   +  + AC+  G   EG +    +     LE  +    C++ + +R+  L  A 
Sbjct: 621 LPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAE 680

Query: 452 RVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-T 509
               SM    + S W +++S+    G  ++A  +  K+    +  D   +  L+S  + T
Sbjct: 681 EFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKI--LELNSDDTGYYVLVSNIYAT 738

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            G +  V T+   M++ G +    S  + +Q
Sbjct: 739 LGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQ 769



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 1/109 (0%)

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SA 765
           SSLL+T          + +H L + +G       +  LI  Y++  +  S+  VFR  S 
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
              +  WN +I      G   +A+  + E+ E   QPDA TF +++ +C
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSC 131


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/811 (32%), Positives = 420/811 (51%), Gaps = 76/811 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+LC +  +   G  VH+ +I  G   D  L   L+  Y  C D+    K+F ++ + +
Sbjct: 375  VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMN-D 433

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
               LWN ++    +   +  ++ LF++MQ         T   +L+  A +G   E K++H
Sbjct: 434  KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            GYVLK    SN +V N                               S+I++Y   G V+
Sbjct: 494  GYVLKLGFGSNTAVVN-------------------------------SLIAAYFKFGGVE 522

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A +LF++++    +PD+++WN +++G   +G   N L +   M  LG   + +++  VL
Sbjct: 523  SAHNLFDELS----EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL 578

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A   +  L  GR  HG+ ++     ++    +L+DMY K   L  A EVF  M +  IV
Sbjct: 579  VAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIV 638

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------------------ 635
            +W S I+ Y  +GL+ +A  + ++M+ + ++PD+ +                        
Sbjct: 639  SWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 698

Query: 636  -----------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                        N+L++ Y+  G  +EA ++   +       ++V+W ++I G  QN   
Sbjct: 699  IKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP----VKDIVSWNTMIGGYSQNSLP 754

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L+ F+ MQ++  KP+  TM+ +L  C GL  L  G+EIH   L+ G+  D +VA  L
Sbjct: 755  NEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 813

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMY+K G L  A+ +F     K L SW  MI G+ ++G G EAI  F+E+   G +PD 
Sbjct: 814  VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 873

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
             +F+ +L AC +SGL+ EGWK+F+SM  +  + P +EHY+C+VDLL + G L +A+ FI 
Sbjct: 874  SSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIE 933

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            +MP KPD TIWG LL  CRIH  ++ AE  +  +F+LEP N+  Y ++ N+ A + +WE+
Sbjct: 934  SMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEE 993

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V++LR  M + G K     SWI++    ++F A  + HP    I   L  L  +M+   Y
Sbjct: 994  VKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDY 1053

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
                R V  + D+ EK  +   H+EK A+ +G++       +RV KN RVC DCH   K+
Sbjct: 1054 FSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKF 1113

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            MS    REI LRD  RFHHF++G CSC D +
Sbjct: 1114 MSKTTKREIVLRDSNRFHHFKDGLCSCRDAF 1144



 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 153/641 (23%), Positives = 279/641 (43%), Gaps = 74/641 (11%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           + L   K  H+ +I  G I   + +   L+F Y+  GD     K F    +     W+  
Sbjct: 383 KSLEDGKRVHSVIISNG-ISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLL 441

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           + +Y    G  +E + ++ ++   GV+      T +LK    L        VH  ++K G
Sbjct: 442 MSEYAKI-GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 500

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F  +  +  +L+  Y K   VESA+ LF E+S+  D + WN +I   + N    N +++F
Sbjct: 501 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE-PDVVSWNSMINGCVVNGFSGNGLEIF 559

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            +M     +    T+V +L A A +G    G+ +HG+ +K+     +   N L+ MYS+ 
Sbjct: 560 IQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC 619

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             L  AT VF  M D  + SW S I++Y   G    A  LF++M S  ++PDI T     
Sbjct: 620 GNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT----- 674

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
                                         V+ ++ A      L  GR+ H Y+++NG+ 
Sbjct: 675 ------------------------------VTSIVHACACSSSLDKGRDVHSYVIKNGMG 704

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            +L V  +L++MY K   ++ A+ VF  +  ++IV+WN++I GY    L   A ++   M
Sbjct: 705 SNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM 764

Query: 625 EEEEIKPDLVSWNSLV---SGYSIWGQSKE----------------ALVIIHHMKNSGIY 665
            +++ KPD ++   ++   +G +   + +E                A  ++      G+ 
Sbjct: 765 -QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLL 823

Query: 666 ------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                        ++++WT +I+G   +    E++  F +M+   I+P+ ++ S +L  C
Sbjct: 824 VLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNAC 883

Query: 714 GGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS- 771
              GLL  G K  + +  + G          ++D+ ++ GNL  A +       K   + 
Sbjct: 884 SHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTI 943

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           W  ++ G  I+ + K A  +   + E   +PD   +  +LA
Sbjct: 944 WGVLLSGCRIHHDVKLAEKVAEHIFE--LEPDNTRYYVVLA 982



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 186/401 (46%), Gaps = 35/401 (8%)

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G  +N + LL   +S     N  S   VLQ   E + L+ G+  H  I+ NG+  D  +G
Sbjct: 350 GDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALG 407

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
             L+ MYV    L   +++FD + N  +  WN L+S Y   G F  +  +  +M++  + 
Sbjct: 408 AKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV 467

Query: 631 PDLVSWNSLVSGYSIWGQSKE-----------------ALV---IIHHMKNSGI------ 664
            +  ++  ++  ++  G+ KE                 A+V   I  + K  G+      
Sbjct: 468 GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNL 527

Query: 665 -----YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
                 P+VV+W S+I+G + N      L+ FIQM    ++ + TT+ S+L     +G L
Sbjct: 528 FDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNL 587

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             G+ +H   +K  F ++   +  L+DMYSK GNL  A EVF K  + T+ SW   I  +
Sbjct: 588 SLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAY 647

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
              G   +AI LF E+   G +PD  T T+++ AC  S  +++G +   S      +   
Sbjct: 648 VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG-RDVHSYVIKNGMGSN 706

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           +   + ++++  K G ++EA      +P K D   W  ++G
Sbjct: 707 LPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIG 746



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 146/330 (44%), Gaps = 13/330 (3%)

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
            L   +  H+ +IK G + ++  +  +LI  Y + G    A   F     +    W++ + 
Sbjct: 688  LDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746

Query: 267  DYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRG 324
             Y S      E LE++ ++  +   F+   +T+  +L  C  L A   G E+H  +++RG
Sbjct: 747  GY-SQNSLPNEALELFLDMQKQ---FKPDDITMACVLPACAGLAALDKGREIHGHILRRG 802

Query: 325  FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            +  D+H+ CAL++ Y KC  +  A  LF  +   +D + W  +I     +     AI  F
Sbjct: 803  YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPK-KDLISWTVMIAGYGMHGFGNEAISTF 861

Query: 385  REMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSR 443
             EM+ +  +    +   +L AC+  G  +EG K  +    +  +E  L    C++ + +R
Sbjct: 862  NEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 921

Query: 444  NNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
               L  A +  +SM    + + W  ++S       V +A  +   +    ++PD   +  
Sbjct: 922  MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI--FELEPDNTRYYV 979

Query: 503  LLSGHFTHGS-YQNVLTLLRGMQSLGFRPN 531
            +L+  +     ++ V  L + MQ  GF+ N
Sbjct: 980  VLANVYAEAEKWEEVKKLRKRMQKRGFKQN 1009



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 14/209 (6%)

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
           + R +++   + +  ++  NS    S+LQ C     L++GK +H + + NG   D  +  
Sbjct: 351 DLRNAIELLTKSKSYELGLNS--YCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGA 408

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+ MY   G+L   R++F K  N  +  WN ++  +A  GN +E++ LF ++ + G   
Sbjct: 409 KLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG 468

Query: 803 DAITFTALLAACKNSGLVEE-----GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
           +  TFT +L      G V+E     G+       ++  ++ +      ++    K G ++
Sbjct: 469 NCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNS------LIAAYFKFGGVE 522

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            A +    +  +PD   W +++  C ++G
Sbjct: 523 SAHNLFDELS-EPDVVSWNSMINGCVVNG 550


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/887 (30%), Positives = 447/887 (50%), Gaps = 77/887 (8%)

Query: 225  NSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
             +D ++ +L+   Y + G    A + F    SR +  W + L  Y    G  +E   ++ 
Sbjct: 75   GADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ-SGLGKEAFRLYS 133

Query: 284  ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            ++H   VI    +L+ +L  CTK   F  G  +HA + K+ F  +  +  AL+  Y    
Sbjct: 134  QMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFG 193

Query: 344  DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
              + A ++F ++    D + +N +I    +    E A+++F EMQ S  +    T+  +L
Sbjct: 194  SFKLAERVFCDML-FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
             ACA VG   +GKQ+H Y+LK+ +  +      L+ +Y +   +E A  +F+     N+ 
Sbjct: 253  AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVV 312

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
             WN M+ +Y  +  +  ++ +F +M                                   
Sbjct: 313  LWNLMLVAYGQISDLAKSFEIFGQM----------------------------------- 337

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            Q+ G  PN  +   +L+  T    ++ G + H   ++NG + D+YV   L+DMY K  CL
Sbjct: 338  QATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCL 397

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS-------- 635
              A+++ + ++ R++V+W S+I+GY        A     +M++  + PD +         
Sbjct: 398  DKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASAC 457

Query: 636  ---------------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
                                       WN+LV+ Y+  G+S+EA  +   ++    + + 
Sbjct: 458  AGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE----HKDE 513

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            +TW  LISG  Q+  Y+++L  F++M Q   K N  T  S +     L  ++ GK++H  
Sbjct: 514  ITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGR 573

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             +K G   +  VA  LI +Y K G+++ A+ +F + + +   SWN +I   + +G G EA
Sbjct: 574  AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            + LF ++ + G +P+ +TF  +LAAC + GLVEEG  YF SMS  Y + P  +HY+C+VD
Sbjct: 634  LDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVD 693

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            +LG+AG LD A  F+  MP   +A IW  LL +C++H ++E  E+A++ L +LEP +SA+
Sbjct: 694  ILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSAS 753

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y L+ N  A++ +W + +++R  M + G++     SWI++   VH F      HP + +I
Sbjct: 754  YVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQI 813

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y  L  L   + K+GY  +   ++ + ++E+K      H+EKLA+ +GLM      P+RV
Sbjct: 814  YKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRV 873

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IKN RVC DCH+  K  S V  REI LRD  RFHHF  G CSC D W
Sbjct: 874  IKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 149/626 (23%), Positives = 283/626 (45%), Gaps = 78/626 (12%)

Query: 297 LTIILKLCTKLMAFW-LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           LT  L+ C      W L +E+HA+ + RG   D  +   L++ Y K   V  A ++F E+
Sbjct: 45  LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
           S   D + W  ++    ++   + A +L+ +M +++       +  +L AC K   F +G
Sbjct: 105 SS-RDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQG 163

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           + IH  V K A  S   V N LI++Y      +LA RVF  M   +  ++N++IS +   
Sbjct: 164 RMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQC 223

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G+ + A  +F++M  S ++PD +T                                   V
Sbjct: 224 GHGECALQIFDEMQLSGLRPDCVT-----------------------------------V 248

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           + +L A   +  L+ G++ H Y+L+ G+ +D     SL+D+YVK   ++ A ++F+    
Sbjct: 249 ASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDR 308

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------------ 631
            N+V WN ++  Y        + ++  QM+   I P                        
Sbjct: 309 TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQI 368

Query: 632 -----------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                      D+     L+  YS +G   +A  I+  ++      +VV+WTS+I+G +Q
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKR----DVVSWTSMIAGYVQ 424

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           ++   E+L  F +MQ   + P++  ++S    C G+  ++ G +IH     +G+  D  +
Sbjct: 425 HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI 484

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
              L+++Y++ G  + A  +FR+  +K   +WN +I GF      K+A+++F ++ + G 
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGA 544

Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
           + +  TF + ++A  N   +++G K     +         E  + ++ L GK G +++A 
Sbjct: 545 KYNVFTFISAISALANLADIKQG-KQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAK 603

Query: 861 DFIRTMPFKPDATIWGALLGSCRIHG 886
                M  + + + W  ++ SC  HG
Sbjct: 604 MIFSEMSLRNEVS-WNTIITSCSQHG 628



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 170/374 (45%), Gaps = 41/374 (10%)

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           E H   +  GL  D  +G  L+D+Y KN  +  A++VF  + +R+ V+W +++SGY   G
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123

Query: 613 LFVNAKKMLNQMEEEEIKP-----------------------------------DLVSWN 637
           L   A ++ +QM    + P                                   +    N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           +L++ Y  +G  K A  +   M    ++ + VT+ +LISG  Q  +   +L+ F +MQ  
Sbjct: 184 ALIALYLGFGSFKLAERVFCDM----LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLS 239

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            ++P+  T++SLL  C  +G LQ GK++H   LK G   D      L+D+Y K G++++A
Sbjct: 240 GLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETA 299

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            ++F       +  WN M++ +    +  ++  +F ++  TG  P+  T+  +L  C  +
Sbjct: 300 HDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCT 359

Query: 818 GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
           G +E G +   S+S        +     ++D+  K G LD+A   +  +  K D   W +
Sbjct: 360 GQIELG-EQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE-KRDVVSWTS 417

Query: 878 LLGSCRIHGHLEYA 891
           ++     H   E A
Sbjct: 418 MIAGYVQHDFCEEA 431



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 702 NSTTMSSLLQTCGGLG-----LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            S  ++  LQ C G G     +L    EIH   +  G   D  +   LID+Y+K+G +  
Sbjct: 41  GSADLTCALQACRGRGNRWPLVL----EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQ 96

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           AR+VF++ +++   SW  M+ G+A  G GKEA  L+ ++  T   P     +++L+AC  
Sbjct: 97  ARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK 156

Query: 817 SGLVEEG 823
             L  +G
Sbjct: 157 GKLFAQG 163


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 280/840 (33%), Positives = 434/840 (51%), Gaps = 105/840 (12%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDF--DVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            +LK    +   +LG ++HA + K G+     V +   L+N YGKC  +  A K+F  +++
Sbjct: 16   VLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITE 75

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA---KVGAFHE 414
              D + WN II    R E+WE AIK FR M     +  S T+V M  AC+   K      
Sbjct: 76   -RDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWL 134

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            GKQIHG   +       S  N L++MY++  +L+ A  +    +D +L +WNSMISS++ 
Sbjct: 135  GKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFS- 192

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                                               +  +   L  LR M   G +P+G +
Sbjct: 193  ----------------------------------QNERFMEALMFLRLMVLEGVKPDGVT 218

Query: 535  VSVVLQAVTELRLLKYGRESHGYILR-NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
             + VL A + L LL+ G+E H Y LR + +  + +VG++L+DMY     +++ + VFD++
Sbjct: 219  FASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSV 278

Query: 594  KNRNIVAWNSLISGY-----------------CFKGLFVNAKKM------------LNQM 624
             +R I  WN++I+GY                    GL+ NA  M            +++ 
Sbjct: 279  LDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRK 338

Query: 625  E-------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
            E       +  ++ +    N+L+  YS  G  K +  I   M++     ++V+W ++I+ 
Sbjct: 339  EGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR----DIVSWNTIITS 394

Query: 678  SLQNENYRESLKFFIQMQ----------------QEDIKPNSTTMSSLLQTCGGLGLLQN 721
             +      ++L    +MQ                Q   KPNS T+ ++L  C  L  L  
Sbjct: 395  YVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAK 454

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            GKEIH   ++N       V + L+DMY+K G L  AR VF +   + + +WN +IM + +
Sbjct: 455  GKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGM 514

Query: 782  YGNGKEAILLFHELLETG-----FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
            +G GKE++ LF +++  G      +P  +TF AL A+C +SG+V+EG   F  M  ++ I
Sbjct: 515  HGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGI 574

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT-IWGALLGSCRIHGHLEYAEIAS 895
             P  +HY+C+VDL+G+AG ++EA+  + TMP   D    W +LLG+CRI+ ++E  EIA+
Sbjct: 575  EPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAA 634

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
              L +L+P  +++Y L+ N+ + +  W+    LR  M  +GVK     SWI+    VH F
Sbjct: 635  ENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKF 694

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    HP + +++  L  L   +KK GYVPDT CV  DIDEEEK  +L  H+EKLAI +
Sbjct: 695  LAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAF 754

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            G++ T     IRV KN RVC+DCHTA+K++S +  REI LRD  RFHHF++G CSC D W
Sbjct: 755  GILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 216/452 (47%), Gaps = 47/452 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY---ESFGGEVQEL-LEVWGELHG 287
           +L+  Y + G    A     L+  R    W+S +  +   E F   +  L L V   +  
Sbjct: 155 ALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKP 214

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHA------SLIKRGFDFDVHLKCALMNFYGK 341
            GV F S     +L  C+ L     G E+HA       +I+  F     +  AL++ Y  
Sbjct: 215 DGVTFAS-----VLPACSHLDLLRTGKEIHAYALRTDDVIENSF-----VGSALVDMYCN 264

Query: 342 CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIV 400
           C  VES   +F  V D +  L WN +I    ++E  E A+ LF EM+ ++   + + T+ 
Sbjct: 265 CGQVESGRLVFDSVLDRKIGL-WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMS 323

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            ++ A  +       + IHGYV+K  LE+N  + N LI MYSR   ++ + R+FDSM+D 
Sbjct: 324 SIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR 383

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           ++ SWN++I+SY   G    A  L ++M   RI+ +  T++         G Y +     
Sbjct: 384 DIVSWNTIITSYVICGRSSDALLLLHEMQ--RIE-EKSTYD---------GDYND----- 426

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
              + + F+PN  ++  VL     L  L  G+E H Y +RN L   + VG++L+DMY K 
Sbjct: 427 --EKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKC 484

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-----EIKPDLVS 635
            CL  A+ VFD M  RN++ WN +I  Y   G    + ++   M  E     E+KP  V+
Sbjct: 485 GCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVT 544

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNS-GIYP 666
           + +L +  S  G   E L + H MKN  GI P
Sbjct: 545 FIALFASCSHSGMVDEGLSLFHKMKNEHGIEP 576



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAR 758
           P++    ++L+   G+  L  GK+IH    K G+       +   L++MY K G L  A 
Sbjct: 8   PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAY 67

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           +VF +   +   SWN +I     +   + AI  F  +L  GF+P + T  ++  AC N
Sbjct: 68  KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSN 125


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/730 (35%), Positives = 403/730 (55%), Gaps = 39/730 (5%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            ENA++L    Q S  +  ++T   +LQ CA + +  +GK++H  +  +++  + ++   L
Sbjct: 83   ENAMELVCMCQKSELE--TKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKL 140

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP-- 495
            +S Y+    L+   RVFD+M+  N+  WN M+S Y  +G    +  LF  M    I+   
Sbjct: 141  VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 496  --------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                          D+I+WN ++SG+ ++G  +  L + + M  LG   + +++  VL  
Sbjct: 201  PESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 260

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                  L  G+  H   +++  +  +    +L+DMY K   L  A  VF+ M  RN+V+W
Sbjct: 261  CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
             S+I+GY   G    A  +L QME+E +K D+V+  S++   +  G       +  ++K 
Sbjct: 321  TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 662  SGIYPNVVTWTSLIS-----GSLQNENYRESLKFFIQMQQEDI----------KPNSTTM 706
            + +  N+    +L+      GS++  N       F  M  +DI          KP+S TM
Sbjct: 381  NNMASNLFVCNALMDMYAKCGSMEGAN-----SVFSTMVVKDIISWNTMVGELKPDSRTM 435

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
            + +L  C  L  L+ GKEIH   L+NG+  D +VA  L+D+Y K G L  AR +F    +
Sbjct: 436  ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            K L SW  MI G+ ++G G EAI  F+E+ + G +PD ++F ++L AC +SGL+E+GW++
Sbjct: 496  KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F  M  D+NI P +EHY+CMVDLL + G L +A+ FI T+P  PDATIWGALL  CRI+ 
Sbjct: 556  FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYH 615

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
             +E AE  + R+F+LEP N+  Y L+ N+ A + + E+V+R+R  + + G++     SWI
Sbjct: 616  DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWI 675

Query: 947  QIDQIVHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            +I   V++F S   + HP + +I   L  +  +MK+ GY P T+    + DE +K   L 
Sbjct: 676  EIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALC 735

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+EKLA+ +GL+    R  IRV KN RVC DCH  AK+MS    REI LRD  RFHHF+
Sbjct: 736  GHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFK 795

Query: 1066 EGECSCNDCW 1075
            +G CSC   W
Sbjct: 796  DGYCSCRGFW 805



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 224/500 (44%), Gaps = 62/500 (12%)

Query: 215 AQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
           ++  K+G    S  + K ++   +E     SA++ F     R    W+S +  Y S  G 
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVS-NGL 231

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            +  L ++ ++   G+      +  +L  C       LG  VH+  IK  F+  ++    
Sbjct: 232 TERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNT 291

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ Y KC D++ A ++F ++ +  + + W  +I    R+   + AI L ++M+    K 
Sbjct: 292 LLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKL 350

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               I  +L ACA+ G+   GK +H Y+  + + SNL VCN L+ MY++   +E A  VF
Sbjct: 351 DVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVF 410

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            +M   ++ SWN+M+                       ++PD  T  C            
Sbjct: 411 STMVVKDIISWNTMV---------------------GELKPDSRTMAC------------ 437

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                                  +L A   L  L+ G+E HGYILRNG   D +V  +L+
Sbjct: 438 -----------------------ILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           D+YVK   L  A+ +FD + ++++V+W  +I+GY   G    A    N+M +  I+PD V
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           S+ S++   S  G  ++     + MKN   I P +  +  ++    +  N  ++ KF   
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKF--- 591

Query: 694 MQQEDIKPNSTTMSSLLQTC 713
           ++   I P++T   +LL  C
Sbjct: 592 IETLPIAPDATIWGALLCGC 611


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/811 (32%), Positives = 422/811 (52%), Gaps = 76/811 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+LC +  +   G  VH+ +I  G   D  L   L+  Y  C D+    K+F ++ + +
Sbjct: 100  VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMN-D 158

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
               LWN ++    +   +  ++ LF++MQ         T   +L+  A +G   E K++H
Sbjct: 159  KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            GYVLK    SN +V N                               S+I++Y   G V+
Sbjct: 219  GYVLKLGFGSNTAVVN-------------------------------SLIAAYFKFGGVE 247

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A +LF++++    +PD+++WN +++G   +G   N L +   M  LG   + +++  VL
Sbjct: 248  SAHNLFDELS----EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL 303

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A   +  L  GR  HG+ ++     ++    +L+DMY K   L  A EVF  M +  IV
Sbjct: 304  VACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIV 363

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------------------ 635
            +W S+I+ Y  +GL+ +A  + ++M+ + ++PD+ +                        
Sbjct: 364  SWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 423

Query: 636  -----------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                        N+L++ Y+  G  +EA ++   +       ++V+W ++I G  QN   
Sbjct: 424  IKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP----VKDIVSWNTMIGGYSQNLLP 479

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L+ F+ MQ++  KP+  TM+ +L  C GL  L  G+EIH   L+ G+  D +VA  L
Sbjct: 480  NEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 538

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMY+K G L  A+ +F     K L SW  MI G+ ++G G EAI  F+E+   G +PD 
Sbjct: 539  VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 598

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
             +F+A+L AC +SGL+ EGWK+F+SM  +  + P +EHY+C+VDLL + G L +A+ FI 
Sbjct: 599  SSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIE 658

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            +MP KPD TIWG LL  CRIH  ++ AE  +  +F+LEP N+  Y ++ N+ A + +WE+
Sbjct: 659  SMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEE 718

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V++LR  M + G K     SWI++    ++F A  + HP   +I   L  L  +M+   Y
Sbjct: 719  VKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDY 778

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
                R V  + D+ EK  +   H+EK A+ +G++       +RV KN RVC DCH   K+
Sbjct: 779  SSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKF 838

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            MS     EI LRD  RFHHF++G CSC D +
Sbjct: 839  MSKTTKMEIVLRDSNRFHHFKDGLCSCRDAF 869



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 154/641 (24%), Positives = 282/641 (43%), Gaps = 74/641 (11%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           + L   K  H+ +I  G I   + +   L+F Y+  GD     K F    +     W+  
Sbjct: 108 KSLEDGKRVHSVIISNG-ISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLL 166

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           + +Y    G  +E + ++ ++   GV+      T +LK    L        VH  ++K G
Sbjct: 167 MSEYAKI-GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 225

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F  +  +  +L+  Y K   VESA+ LF E+S+  D + WN +I   + N    N +++F
Sbjct: 226 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE-PDVVSWNSMINGCVVNGFSGNGLEIF 284

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            +M     +    T+V +L ACA +G    G+ +HG+ +K+     +   N L+ MYS+ 
Sbjct: 285 IQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC 344

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             L  AT VF  M D  + SW S+I++Y   G    A  LF++M S  ++PDI T     
Sbjct: 345 GNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT----- 399

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
                                         V+ ++ A      L  GR+ H Y+++NG+ 
Sbjct: 400 ------------------------------VTSIVHACACSSSLDKGRDVHSYVIKNGMG 429

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            +L V  +L++MY K   ++ A+ VF  +  ++IV+WN++I GY    L   A ++   M
Sbjct: 430 SNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM 489

Query: 625 EEEEIKPDLVSWNSLV---SGYSIWGQSKE----------------ALVIIHHMKNSGIY 665
            +++ KPD ++   ++   +G +   + +E                A  ++      G+ 
Sbjct: 490 -QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLL 548

Query: 666 ------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                        ++++WT +I+G   +    E++  F +M+   I+P+ ++ S++L  C
Sbjct: 549 VLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNAC 608

Query: 714 GGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS- 771
              GLL  G K  + +  + G          ++D+ ++ GNL  A +       K   + 
Sbjct: 609 SHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTI 668

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           W  ++ G  I+ + K A  +   + E   +PD   +  +LA
Sbjct: 669 WGVLLSGCRIHHDVKLAEKVAEHIFE--LEPDNTRYYVVLA 707



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 188/401 (46%), Gaps = 35/401 (8%)

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G  +N + LL   +S     N  S   VLQ   E + L+ G+  H  I+ NG+  D  +G
Sbjct: 75  GDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALG 132

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
             L+ MYV    L   +++FD + N  +  WN L+S Y   G F  +  +  +M++  + 
Sbjct: 133 AKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVV 192

Query: 631 PDLVSWNSLVSGYSIWGQSKE-----------------ALV---IIHHMKNSGI------ 664
            +  ++  ++  ++  G+ KE                 A+V   I  + K  G+      
Sbjct: 193 GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNL 252

Query: 665 -----YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
                 P+VV+W S+I+G + N      L+ FIQM    ++ + TT+ S+L  C  +G L
Sbjct: 253 FDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNL 312

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             G+ +H   +K  F ++   +  L+DMYSK GNL  A EVF K  + T+ SW  +I  +
Sbjct: 313 SLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAY 372

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
              G   +AI LF E+   G +PD  T T+++ AC  S  +++G +   S      +   
Sbjct: 373 VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG-RDVHSYVIKNGMGSN 431

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           +   + ++++  K G ++EA      +P K D   W  ++G
Sbjct: 432 LPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIG 471



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 146/330 (44%), Gaps = 13/330 (3%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L   +  H+ +IK G + ++  +  +LI  Y + G    A   F     +    W++ + 
Sbjct: 413 LDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRG 324
            Y S      E LE++ ++  +   F+   +T+  +L  C  L A   G E+H  +++RG
Sbjct: 472 GY-SQNLLPNEALELFLDMQKQ---FKPDDITMACVLPACAGLAALDKGREIHGHILRRG 527

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           +  D+H+ CAL++ Y KC  +  A  LF  +   +D + W  +I     +     AI  F
Sbjct: 528 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPK-KDLISWTVMIAGYGMHGFGNEAISTF 586

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSR 443
            EM+ +  +    +   +L AC+  G  +EG K  +    +  +E  L    C++ + +R
Sbjct: 587 NEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 646

Query: 444 NNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
              L  A +  +SM    + + W  ++S       V +A  +   +    ++PD   +  
Sbjct: 647 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI--FELEPDNTRYYV 704

Query: 503 LLSGHFTHGS-YQNVLTLLRGMQSLGFRPN 531
           +L+  +     ++ V  L + MQ  GF+ N
Sbjct: 705 VLANVYAEAEKWEEVKKLRKRMQKRGFKQN 734



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 14/209 (6%)

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
           + R +++   + +  ++  NS    S+LQ C     L++GK +H + + NG   D  +  
Sbjct: 76  DLRNAIELLTKSKSYELGLNS--YCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGA 133

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+ MY   G+L   R++F K  N  +  WN ++  +A  GN +E++ LF ++ + G   
Sbjct: 134 KLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG 193

Query: 803 DAITFTALLAACKNSGLVEE-----GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
           +  TFT +L      G V+E     G+       ++  ++ +      ++    K G ++
Sbjct: 194 NCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNS------LIAAYFKFGGVE 247

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            A +    +  +PD   W +++  C ++G
Sbjct: 248 SAHNLFDELS-EPDVVSWNSMINGCVVNG 275


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
            [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/747 (33%), Positives = 399/747 (53%), Gaps = 72/747 (9%)

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            HL    +  Y    D++ A  LF ++    D   W  +I    ++ +   AI+ + + + 
Sbjct: 12   HLALKFIKVYSNSGDLQRARHLFDKIPQ-PDLPTWTILISALTKHGRSLEAIQYYNDFRH 70

Query: 390  SSAKAISRTIV-KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
             +     + ++  + +ACA +      K++H   ++    S++ + N LI MY +    E
Sbjct: 71   KNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSE 130

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A  VF+ M                                      D+I+W  + S + 
Sbjct: 131  GARLVFEGMPFR-----------------------------------DVISWTSMASCYV 155

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
              G  +  L   R M   G RPN  +VS +L A T+L+ LK GRE HG+++RNG+  +++
Sbjct: 156  NCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVF 215

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            V ++L++MY     ++ AQ VFD+M  R                                
Sbjct: 216  VSSALVNMYASCLSIRQAQLVFDSMSRR-------------------------------- 243

Query: 629  IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
               D VSWN L++ Y +  + ++ L +   M + G+  N  +W ++I G +QN    ++L
Sbjct: 244  ---DTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKAL 300

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
            +   +MQ    KPN  T++S+L  C  L  L+ GK+IH    ++ F +D    T L+ MY
Sbjct: 301  EVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMY 360

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
            +K G+L+ +R VF     +   SWN MI+  +++GNG+EA+LLF E++++G +P+++TFT
Sbjct: 361  AKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFT 420

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
             +L+ C +S LV+EG   FDSMS D+++ P  +H+SCMVD+L +AG L+EA++FI+ MP 
Sbjct: 421  GVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPI 480

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            +P A  WGALLG CR++ ++E   IA+ RLF++E  N  NY L+ N+L  +  W +    
Sbjct: 481  EPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASET 540

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R  M + GV      SWIQ+   VH F      +  + EIY  L ++  +M+  GY+P+T
Sbjct: 541  RKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNT 600

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
              V QD+D+EEK +VL +H+EKLA+ +G++     + IRV KN R+C DCH A K+M+ +
Sbjct: 601  DFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKI 660

Query: 1049 RGREIFLRDGARFHHFREGECSCNDCW 1075
             G +I +RD  RFHHFR+G CSC D W
Sbjct: 661  VGVKIIVRDSLRFHHFRDGLCSCQDFW 687



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 226/479 (47%), Gaps = 7/479 (1%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y   GD   A   F          W+  +      G  + E ++ + +   K  +   ++
Sbjct: 21  YSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSL-EAIQYYNDFRHKNCVEPDKL 79

Query: 297 LTI-ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           L + + K C  L        VH   I+ GF  DV L  AL++ YGKCR  E A  +F E 
Sbjct: 80  LLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF-EG 138

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
               D + W  +    +       A+  FR+M  +  +  S T+  +L AC  +     G
Sbjct: 139 MPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSG 198

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +++HG+V+++ +  N+ V + L++MY+    +  A  VFDSM   +  SWN +I++Y   
Sbjct: 199 REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLN 258

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
              +   S+F +M S  +  +  +WN ++ G   +G  +  L +L  MQ+ GF+PN  ++
Sbjct: 259 KECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITI 318

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           + VL A T L  L+ G++ HGYI R+    DL   T+L+ MY K   L+ ++ VF  M  
Sbjct: 319 TSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTK 378

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
           R+ V+WN++I      G    A  +  +M +  ++P+ V++  ++SG S      E L+I
Sbjct: 379 RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLI 438

Query: 656 IHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
              M ++  + P+    + ++    +     E+ +F  +M    I+P +    +LL  C
Sbjct: 439 FDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMP---IEPTAGAWGALLGGC 494


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/688 (34%), Positives = 396/688 (57%), Gaps = 10/688 (1%)

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC-NCLISMYSRNNKLE 448
            S + A S    +++  C +    ++ K++  ++     +   S   N L+ +Y++  KL 
Sbjct: 16   SRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLR 75

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A  +FD M   ++ SWN+++S+Y   G +    + F++M       D +++N  ++G  
Sbjct: 76   DAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFR----DSVSYNTTIAGFS 131

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             +   Q  L L + MQ  GF P   ++  +L A  +L  L+YG++ HG I+      +++
Sbjct: 132  GNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVF 191

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            +  +L DMY K   ++ A+ +FD +  +N+V+WN +ISGY   G       +L+QM    
Sbjct: 192  IWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSG 251

Query: 629  IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
              PD V+ +++++ Y   G+  EA  +    K      ++V WT+++ G  +N    ++L
Sbjct: 252  HMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEK----DIVCWTAMMVGYAKNGREEDAL 307

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
              F +M  E I+P+S T+SS++ +C  L  L +G+ +H   +  G   +  V++ LIDMY
Sbjct: 308  LLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMY 367

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
            SK G +  AR VF     + + SWN MI+G A  G+ K+A+ LF  +L+  F+PD +TF 
Sbjct: 368  SKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFI 427

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
             +L+AC +   +E+G +YFDS++  + + PT++HY+CMV+LLG+ G +++A   I+ M  
Sbjct: 428  GILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAH 487

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
             PD  IW  LL  C   G +  AE+A+R LF+L+P  +  Y ++ N+ A   RW+DV  +
Sbjct: 488  DPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASV 547

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R+ M    VK    +SWI+ID  VH F++E   HP + +IY +L  L+ ++++ G+ P+T
Sbjct: 548  RNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNT 607

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR-APIRVIKNTRVCSDCHTAAKYMSL 1047
              V  D+ E+EK K +  H+EKLA+ +GL+K  +  +PIR+IKN R+C+DCH   K+ S 
Sbjct: 608  NLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASR 667

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            + GR+I LRD  RFHHF  G+CSCND W
Sbjct: 668  IIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 214/481 (44%), Gaps = 52/481 (10%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL++ Y K   +++    F  +    D + +N  I     N   + +++LF+ MQ    +
Sbjct: 94  ALLSAYAKSGSIQNLKATFDRMP-FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               TIV +L A A++     GKQIHG ++      N+ + N L  MY++  ++E A  +
Sbjct: 153 PTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP------------------ 495
           FD +   NL SWN MIS Y   G  +    L ++M  S   P                  
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRV 272

Query: 496 -------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
                        DI+ W  ++ G+  +G  ++ L L   M      P+  ++S V+ + 
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            +L  L +G+  HG  +  GL+ +L V ++L+DMY K   + +A+ VF+ M  RN+V+WN
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--YSIW-GQSKEALVIIHHM 659
           ++I G    G   +A ++   M +++ KPD V++  ++S   +  W  Q +E    I   
Sbjct: 393 AMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSI--T 450

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
              G+ P +  +  +++   +     +++     M  +   P+    S+LL  C   G +
Sbjct: 451 NQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHD---PDFLIWSTLLSICSTKGDI 507

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLI---DMYSKSGNLK---SAREVFRKSANKTLA--S 771
            N +    +  ++ F  D  +A   I   +MY+  G  K   S R + +    K  A  S
Sbjct: 508 VNAE----VAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFS 563

Query: 772 W 772
           W
Sbjct: 564 W 564



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 125/604 (20%), Positives = 239/604 (39%), Gaps = 108/604 (17%)

Query: 185 QAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDF 243
           Q  L C+ +     NE N+ + L S    H           +D  + + + H Y +FG  
Sbjct: 27  QLVLECVRT-----NEINQAKRLQSHMEHHL-------FQPTDSFLHNQLLHLYAKFGKL 74

Query: 244 TSAAKAFFLYFSRSYADWSSFLEDYES----------------------------FGGEV 275
             A   F     R    W++ L  Y                              F G  
Sbjct: 75  RDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNS 134

Query: 276 --QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
             QE LE++  +  +G       +  IL    +L     G ++H S+I R F  +V +  
Sbjct: 135 CPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWN 194

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL + Y KC ++E A  LF  ++  ++ + WN +I    +N + E  I L  +M+ S   
Sbjct: 195 ALTDMYAKCGEIEQARWLFDCLTK-KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHM 253

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T+  ++ A  + G   E ++    V     E ++     ++  Y++N + E A  +
Sbjct: 254 PDQVTMSTIIAAYCQCGRVDEARR----VFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309

Query: 454 FDSM---------------------------------------KDHNLSSWNSMISSYTG 474
           F+ M                                        ++NL   +++I  Y+ 
Sbjct: 310 FNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            G++D A S+FN M +     ++++WN ++ G   +G  ++ L L   M    F+P+  +
Sbjct: 370 CGFIDDARSVFNLMPTR----NVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVT 425

Query: 535 VSVVLQAVTELRLLKYGRESHGYIL-RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
              +L A      ++ G+E    I  ++G+   L     ++++  +   ++ A  +  NM
Sbjct: 426 FIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNM 485

Query: 594 K-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL-VSWNSLVSGYSIWGQSKE 651
             + + + W++L+S    KG  VNA+     +   E+ P + V +  L + Y+  G+ K+
Sbjct: 486 AHDPDFLIWSTLLSICSTKGDIVNAEVAARHL--FELDPTIAVPYIMLSNMYASMGRWKD 543

Query: 652 ALVIIHHMKNSGIYP-----------NVVTWTSLISGSLQNENYRESLKFFI-QMQQEDI 699
              + + MK+  +              V  +TS      ++E+  E L   I ++Q+E  
Sbjct: 544 VASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGF 603

Query: 700 KPNS 703
            PN+
Sbjct: 604 TPNT 607


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 790

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 272/815 (33%), Positives = 413/815 (50%), Gaps = 83/815 (10%)

Query: 301  LKLCTKL--MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD- 357
            L+LC  L   +  L   VH ++I  GF    H+   L++ Y K  +++ A +LF E+S+ 
Sbjct: 19   LRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEP 78

Query: 358  -------------------------------LEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
                                           + D +++N +I     N    +AI LF +
Sbjct: 79   DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 387  MQFSSAKAISRTIVKMLQACA-KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR-- 443
            M+    K    T   +L   A  V    +  Q H   LKS      SV N L+S+YSR  
Sbjct: 139  MKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCA 198

Query: 444  --NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
               + L  A +VFD + + +  SW +M++ Y   G  D+   L   M+ +     ++ +N
Sbjct: 199  SSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENM---KLVAYN 255

Query: 502  CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
             ++SG+   G YQ  L ++R M S G   +  +   V++A    RLL+ G++ H Y+LR 
Sbjct: 256  AMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR 315

Query: 562  GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
              D+  +   SL+ +Y K      A+ +F+ M  +                         
Sbjct: 316  E-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK------------------------- 349

Query: 622  NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                      DLVSWN+L+SGY   G   EA +I   MK      N+++W  +ISG  +N
Sbjct: 350  ----------DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILSWMIMISGLAEN 395

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                E LK F  M++E  +P     S  +++C  LG   NG++ H   +K GF       
Sbjct: 396  GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAG 455

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
              LI MY+K G ++ A++VFR        SWN +I     +G+G EA+ ++ E+L+ G +
Sbjct: 456  NALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIR 515

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            PD ITF  +L AC ++GLV++G KYF+SM T Y I P  +HY+ ++DLL ++G   EA  
Sbjct: 516  PDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAES 575

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
             I ++PFKP A IW ALL  CR+HG++E   IA+ +LF L P +   Y L+ N+ A + +
Sbjct: 576  IIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQ 635

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            WE+V R+R  M + GVK  +  SWI+++  VH F  +   HP    +Y  L  L  EM++
Sbjct: 636  WEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRR 695

Query: 982  LGYVPDTRCVYQDIDEE-EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            LGYVPDT  V  D++ +  K  +L +H+EK+A+ +GLMK      IR+ KN R C DCH 
Sbjct: 696  LGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHN 755

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              +++S V  R+I LRD  RFHHFR GECSC + W
Sbjct: 756  FFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 242/509 (47%), Gaps = 33/509 (6%)

Query: 393 KAISRTIVKMLQACAKV--GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           +AI+      L+ C  +   +    + +HG ++    + +  + N LI +Y ++++L+ A
Sbjct: 9   RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYA 68

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            ++FD + + +  +  +M+S Y   G + +A S+F +   S    D + +N +++G   +
Sbjct: 69  RQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVS--MRDTVMYNAMITGFSHN 126

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT-----ELRLLKYGRESHGYILRNGLDY 565
               + + L   M+  GF+P+  + + VL  +      E + +++    H   L++G  Y
Sbjct: 127 NDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQF----HAAALKSGAGY 182

Query: 566 DLYVGTSLMDMYVK----NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
              V  +L+ +Y +       L +A++VFD++  ++  +W ++++GY   G F   K++L
Sbjct: 183 VTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELL 242

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
             M+E      LV++N+++SGY   G  +EAL ++  M +SGI  +  T+ S+I      
Sbjct: 243 KGMDE---NMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANA 299

Query: 682 E--NYRESLKFFIQMQQEDIKPN-STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
                 + +  ++ +++ED   +   ++ +L   CG        + I     +    KD 
Sbjct: 300 RLLQLGKQVHAYV-LRREDFSFHFDNSLVTLYYKCGK---FNEARAI----FEKMPAKDL 351

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
                L+  Y  SG++  A+ +F++   K + SW  MI G A  G G+E + LF  +   
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
           GF+P    F+  + +C   G    G + F +         ++   + ++ +  K G ++E
Sbjct: 412 GFEPCDYAFSGAIKSCAVLGAYCNGQQ-FHAQLVKIGFDSSLSAGNALITMYAKCGVVEE 470

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           A    RTMP   D+  W AL+ +   HGH
Sbjct: 471 AQQVFRTMPCL-DSVSWNALIAALGQHGH 498



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 178/439 (40%), Gaps = 78/439 (17%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  QE LE+   +   G+         +++ C       LG +VHA +++R  DF  H  
Sbjct: 265 GLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFD 323

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII--------------MVKLRNEK-- 376
            +L+  Y KC     A  +F ++   +D + WN ++              + K   EK  
Sbjct: 324 NSLVTLYYKCGKFNEARAIFEKMP-AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382

Query: 377 --W-------------ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
             W             E  +KLF  M+    +         +++CA +GA+  G+Q H  
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQ 442

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           ++K   +S+LS  N LI+MY++   +E A +VF +M   +  SWN++I++    G+   A
Sbjct: 443 LVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEA 502

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             ++ +M    I+PD IT+                LT+L      G    G      ++ 
Sbjct: 503 VDVYEEMLKKGIRPDRITF----------------LTVLTACSHAGLVDQGRKYFNSMET 546

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA- 600
           V              Y +  G D+       L+D+  ++     A+ + +++  +     
Sbjct: 547 V--------------YRIPPGADH----YARLIDLLCRSGKFSEAESIIESLPFKPTAEI 588

Query: 601 WNSLISGYCFKG----LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           W +L+SG    G      + A K+   + E +      ++  L + Y+  GQ +E   + 
Sbjct: 589 WEALLSGCRVHGNMELGIIAADKLFGLIPEHD-----GTYMLLSNMYAATGQWEEVARVR 643

Query: 657 HHMKNSGIYPNVV-TWTSL 674
             M++ G+   V  +W  +
Sbjct: 644 KLMRDRGVKKEVACSWIEM 662


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 274/907 (30%), Positives = 454/907 (50%), Gaps = 80/907 (8%)

Query: 204  FRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
            F C+  +   HA+ I  G   NS  +   LI  Y + G   SA K F     R    W +
Sbjct: 186  FHCVEKI---HARTITHG-YENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVA 241

Query: 264  FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
             L      G E + +L ++ ++H  GV     I + +L  CTK+  + +G ++H  ++K+
Sbjct: 242  MLSGLSQSGCEEEAVL-LFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQ 300

Query: 324  GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
            GF  + ++  AL+  Y +  +   A ++F+ +    D++ +N +I    +    + A++L
Sbjct: 301  GFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQ-RDEVSYNSLISGLSQQGYSDKALEL 359

Query: 384  FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
            F++M     K    T+  +L AC+ VGA   GKQ H Y +K+ + S++ +   L+ +Y +
Sbjct: 360  FKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVK 419

Query: 444  NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
             + ++ A   F S +  N+  WN M+          VA+ L + +N S            
Sbjct: 420  CSDIKTAHEFFLSTETENVVLWNVML----------VAYGLLDNLNES------------ 457

Query: 504  LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
                           +   MQ  G  PN  +   +L+  + LR +  G + H  +L+ G 
Sbjct: 458  -------------FKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGF 504

Query: 564  DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             +++YV + L+DMY K   L +A ++F  +K +++V+W ++I+GY     F  A  +  +
Sbjct: 505  QFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKE 564

Query: 624  MEEEEIKPDLVSW-----------------------------------NSLVSGYSIWGQ 648
            M+++ I  D + +                                   N+LVS Y+  G+
Sbjct: 565  MQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGK 624

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             ++A      +       + ++W SLISG  Q+ +  E+L  F QM +   + NS T   
Sbjct: 625  VRDAYFAFDKI----FSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGP 680

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
             +     +  ++ GK+IH + +K G   +  V+  LI +Y+K GN+  A   F +   K 
Sbjct: 681  AVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKN 740

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
              SWN M+ G++ +G+G +A+ LF ++ + G  P+ +TF  +L+AC + GLV+EG KYF 
Sbjct: 741  EISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQ 800

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            SM   + ++P  EHY+C+VDLLG++G L  A  F+  MP +PDA +   LL +C +H ++
Sbjct: 801  SMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNI 860

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
            +  E A+  L +LEP +SA Y L+ N+ A++ +W   +R R  M + GVK     SWI++
Sbjct: 861  DIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEV 920

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
            +  VH F A    HP   +IY  L  L     + GY+P T  +  D +  +KG   + H+
Sbjct: 921  NNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHS 980

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            EKLAI +GL+   S  PI V KN RVC DCH   KY+S +  R I +RD  RFHHF+ G 
Sbjct: 981  EKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGI 1040

Query: 1069 CSCNDCW 1075
            CSC D W
Sbjct: 1041 CSCKDYW 1047



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 183/645 (28%), Positives = 289/645 (44%), Gaps = 88/645 (13%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +GV   S+    +L  C     F  G ++H  ++K GF  +V L   LM+ Y    D++ 
Sbjct: 62  RGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDG 121

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  +F E+  +     WN+++   +  +     + LFR M     K   RT   +L+ C 
Sbjct: 122 AVTVFDEMP-VRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG 180

Query: 408 KVGA-FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
                FH  ++IH   +    E++L VCN LI +Y +N  L  A +VFD ++  +  SW 
Sbjct: 181 GGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWV 240

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           +M+S  +  G  + A  LF +M++S                                   
Sbjct: 241 AMLSGLSQSGCEEEAVLLFCQMHTS----------------------------------- 265

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
           G  P     S VL A T++   K G + HG +L+ G   + YV  +L+ +Y +      A
Sbjct: 266 GVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPA 325

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG---- 642
           ++VF+ M  R+ V++NSLISG   +G    A ++  +M  + +KPD V+  SL+S     
Sbjct: 326 EQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSV 385

Query: 643 -----------YSI-WGQSK----EALVIIHHMKNSGI-----------YPNVVTWTSLI 675
                      Y+I  G S     E  ++  ++K S I             NVV W  ++
Sbjct: 386 GALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVML 445

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
                 +N  ES K F QMQ E I+PN  T  S+L+TC  L  +  G++IH   LK GF 
Sbjct: 446 VAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQ 505

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
            + YV++ LIDMY+K G L  A ++FR+   K + SW  MI G+A +    EA+ LF E+
Sbjct: 506 FNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEM 565

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWK---------YFDSMSTDYNIIPTIEHYSCM 846
            + G   D I F + ++AC     + +G +         Y D +S            + +
Sbjct: 566 QDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVG----------NAL 615

Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           V L  + G + +A+ F     F  D   W +L+      GH E A
Sbjct: 616 VSLYARCGKVRDAY-FAFDKIFSKDNISWNSLISGFAQSGHCEEA 659



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 237/544 (43%), Gaps = 69/544 (12%)

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           +E   N I     M+    +A S+T + +L  C   G F +G ++HG +LK    + + +
Sbjct: 46  DEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVL 105

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
           C  L+ +Y     L+ A  VFD M    LS WN ++  +           LF +M   ++
Sbjct: 106 CERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKV 165

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           +PD  T+  +L G                              V    V ++        
Sbjct: 166 KPDERTYAGVLRG-------------------------CGGGDVPFHCVEKI-------- 192

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H   + +G +  L+V   L+D+Y KN  L +A++VFD ++ R+ V+W +++SG    G 
Sbjct: 193 -HARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGC 251

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVS---------------------GYSIWGQSKEA 652
              A  +  QM    + P    ++S++S                     G+S+      A
Sbjct: 252 EEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNA 311

Query: 653 LVIIH----------HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           LV ++           + N+ +  + V++ SLISG  Q     ++L+ F +M  + +KP+
Sbjct: 312 LVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPD 371

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
             T++SLL  C  +G L  GK+ H   +K G   D  +   L+D+Y K  ++K+A E F 
Sbjct: 372 CVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFL 431

Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            +  + +  WN M++ + +  N  E+  +F ++   G +P+  T+ ++L  C +   V+ 
Sbjct: 432 STETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDL 491

Query: 823 GWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
           G + +   + T +     +   S ++D+  K G LD A    R +  K D   W A++  
Sbjct: 492 GEQIHTQVLKTGFQFNVYVS--SVLIDMYAKLGKLDHALKIFRRLKEK-DVVSWTAMIAG 548

Query: 882 CRIH 885
              H
Sbjct: 549 YAQH 552



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 1/208 (0%)

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
           T+L      +E     + F   M++  ++ NS T   LL  C   G   +G ++H   LK
Sbjct: 37  TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            GF  +  +   L+D+Y   G+L  A  VF +   + L+ WN ++  F         + L
Sbjct: 97  MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156

Query: 792 FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
           F  +L+   +PD  T+  +L  C    +     +   + +  +    ++   + ++DL  
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYF 216

Query: 852 KAGYLDEAWDFIRTMPFKPDATIWGALL 879
           K G+L+ A      +  K D+  W A+L
Sbjct: 217 KNGFLNSAKKVFDGLQ-KRDSVSWVAML 243


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At1g68930-like [Cucumis
            sativus]
          Length = 695

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/688 (34%), Positives = 395/688 (57%), Gaps = 10/688 (1%)

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC-NCLISMYSRNNKLE 448
            S + A S    +++  C +    ++ K++  ++     +   S   N L+ +Y++  KL 
Sbjct: 16   SRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLR 75

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A  +FD M   +  SWN+++S+Y   G +    + F++M       D +++N  ++G  
Sbjct: 76   DAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFR----DSVSYNTTIAGFS 131

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             +   Q  L L + MQ  GF P   ++  +L A  +L  L+YG++ HG I+      +++
Sbjct: 132  GNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVF 191

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            +  +L DMY K   ++ A+ +FD +  +N+V+WN +ISGY   G       +L+QM    
Sbjct: 192  IWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSG 251

Query: 629  IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
              PD V+ +++++ Y   G+  EA  +    K      ++V WT+++ G  +N    ++L
Sbjct: 252  HMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEK----DIVCWTAMMVGYAKNGREEDAL 307

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
              F +M  E I+P+S T+SS++ +C  L  L +G+ +H   +  G   +  V++ LIDMY
Sbjct: 308  LLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMY 367

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
            SK G +  AR VF     + + SWN MI+G A  G+ K+A+ LF  +L+  F+PD +TF 
Sbjct: 368  SKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFI 427

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
             +L+AC +   +E+G +YFDS+S  + + PT++HY+CMV+LLG+ G +++A   I+ M  
Sbjct: 428  GILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAH 487

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
             PD  IW  LL  C   G +  AE+A+R LF+L+P  +  Y ++ N+ A   RW+DV  +
Sbjct: 488  DPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASV 547

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R+ M    VK    +SWI+ID  VH F++E   HP + +IY +L  L+ ++++ G+ P+T
Sbjct: 548  RNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNT 607

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR-APIRVIKNTRVCSDCHTAAKYMSL 1047
              V  D+ E+EK K +  H+EKLA+ +GL+K  +  +PIR+IKN R+C+DCH   K+ S 
Sbjct: 608  NLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASR 667

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            + GR+I LRD  RFHHF  G+CSCND W
Sbjct: 668  IIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 215/481 (44%), Gaps = 52/481 (10%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL++ Y K   +++    F  +    D + +N  I     N   + +++LF+ MQ    +
Sbjct: 94  ALLSAYAKSGSIQNLKATFDRMP-FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               TIV +L A A++     GKQIHG ++      N+ + N L  MY++  ++E A  +
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP------------------ 495
           FD +   NL SWN MIS Y   G  +    L ++M  S   P                  
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRV 272

Query: 496 -------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
                        DI+ W  ++ G+  +G  ++ L L   M      P+  ++S V+ + 
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            +L  L +G+  HG  +  GL+ +L V ++L+DMY K   + +A+ VF+ M  RN+V+WN
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--YSIW-GQSKEALVIIHHM 659
           ++I G    G   +A ++   M +++ KPD V++  ++S   +  W  Q +E    I + 
Sbjct: 393 AMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQ 452

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
              G+ P +  +  +++   +     +++     M  +   P+    S+LL  C   G +
Sbjct: 453 H--GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHD---PDFLIWSTLLSICSTKGDI 507

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLI---DMYSKSGNLK---SAREVFRKSANKTLA--S 771
            N +    +  ++ F  D  +A   I   +MY+  G  K   S R + +    K  A  S
Sbjct: 508 VNAE----VAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFS 563

Query: 772 W 772
           W
Sbjct: 564 W 564



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 125/604 (20%), Positives = 240/604 (39%), Gaps = 108/604 (17%)

Query: 185 QAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDF 243
           Q  L C+ +     NE N+ + L S    H           +D  + + + H Y +FG  
Sbjct: 27  QLVLECVRT-----NEINQAKRLQSHMEHHL-------FQPTDSFLHNQLLHLYAKFGKL 74

Query: 244 TSAAKAFFLYFSRSYADWSSFLEDYES----------------------------FGGEV 275
             A   F     R    W++ L  Y                              F G  
Sbjct: 75  RDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNS 134

Query: 276 --QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
             QE LE++  +  +G       +  IL    +L+    G ++H S+I R F  +V +  
Sbjct: 135 CPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWN 194

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL + Y KC ++E A  LF  ++  ++ + WN +I    +N + E  I L  +M+ S   
Sbjct: 195 ALTDMYAKCGEIEQARWLFDCLTK-KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHM 253

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T+  ++ A  + G   E ++    V     E ++     ++  Y++N + E A  +
Sbjct: 254 PDQVTMSTIIAAYCQCGRVDEARR----VFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309

Query: 454 FDSM---------------------------------------KDHNLSSWNSMISSYTG 474
           F+ M                                        ++NL   +++I  Y+ 
Sbjct: 310 FNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            G++D A S+FN M +     ++++WN ++ G   +G  ++ L L   M    F+P+  +
Sbjct: 370 CGFIDDARSVFNLMPTR----NVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVT 425

Query: 535 VSVVLQAVTELRLLKYGRESHGYIL-RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
              +L A      ++ G+E    I  ++G+   L     ++++  +   ++ A  +  NM
Sbjct: 426 FIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNM 485

Query: 594 K-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL-VSWNSLVSGYSIWGQSKE 651
             + + + W++L+S    KG  VNA+     +   E+ P + V +  L + Y+  G+ K+
Sbjct: 486 AHDPDFLIWSTLLSICSTKGDIVNAEVAARHL--FELDPTIAVPYIMLSNMYASMGRWKD 543

Query: 652 ALVIIHHMKNSGIYP-----------NVVTWTSLISGSLQNENYRESLKFFI-QMQQEDI 699
              + + MK+  +              V  +TS      ++E+  E L   I ++Q+E  
Sbjct: 544 VASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGF 603

Query: 700 KPNS 703
            PN+
Sbjct: 604 TPNT 607


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
          Length = 755

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 361/645 (55%), Gaps = 28/645 (4%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N +IS ++ +  + LA   FD   + +  SWN M+++Y   G V+ A  LFN    SR +
Sbjct: 135  NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTE 190

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D+I+WN L+SG+   G       L   M      P    VS        + +  Y R  
Sbjct: 191  WDVISWNALMSGYVQWGKMSEARELFDRM------PGRDVVS------WNIMVSGYARRG 238

Query: 555  HGYILRNGLD----YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
                 R   D     D++  T+++  Y +N  L+ A+ VFD M  RN V+WN++++ Y  
Sbjct: 239  DMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ 298

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
            + +   AK++ N M    +     SWN++++GY+  G  +EA  +   M       + V+
Sbjct: 299  RRMMDEAKELFNMMPCRNV----ASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVS 350

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W ++++   Q     E+L+ FI+M +     N +  + +L TC  +  L+ G ++H   +
Sbjct: 351  WAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI 410

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            + G+    +V   L+ MY K GN++ AR  F +   + + SWN MI G+A +G GKEA+ 
Sbjct: 411  RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 470

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            +F  +  T  +PD IT   +LAAC +SGLVE+G  YF SM  D+ +    EHY+CM+DLL
Sbjct: 471  IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 530

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG L EA D ++ MPF+PD+T+WGALLG+ RIH + E    A+ ++F+LEP N+  Y 
Sbjct: 531  GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 590

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A S +W D  ++R  M+E GVK V  +SWI++   VH FSA    HP   +IY 
Sbjct: 591  LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYA 650

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L   MKK GYV  T  V  D++EEEK  +L  H+EKLA+ YG++      PIRVIK
Sbjct: 651  FLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIK 710

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH A KY+S + GR I LRD  RFHHFR G CSC D W
Sbjct: 711  NLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 203/451 (45%), Gaps = 24/451 (5%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           VE    L     ++DV    ALM+ Y +   +  A +LF  +    D + WN ++    R
Sbjct: 178 VEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPG-RDVVSWNIMVSGYAR 236

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                 A +LF             T   ++   A+ G   E ++    V  +  E N   
Sbjct: 237 RGDMVEARRLFDAAPVRDVF----TWTAVVSGYAQNGMLEEARR----VFDAMPERNAVS 288

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N +++ Y +   ++ A  +F+ M   N++SWN+M++ Y   G ++ A ++F+ M     
Sbjct: 289 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP---- 344

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           Q D ++W  +L+ +   G  +  L L   M   G   N S+ + VL    ++  L+ G +
Sbjct: 345 QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 404

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG ++R G     +VG +L+ MY K   +++A+  F+ M+ R++V+WN++I+GY   G 
Sbjct: 405 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 464

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A ++ + M     KPD ++   +++  S  G  ++ +   + M +  G+      +T
Sbjct: 465 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT 524

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            +I    +     E+      M+    +P+ST   +LL    G   +    E+     + 
Sbjct: 525 CMIDLLGRAGRLAEAHDL---MKDMPFEPDSTMWGALL----GASRIHRNPELGRSAAEK 577

Query: 733 GF---IKDAYVATGLIDMYSKSGNLKSAREV 760
            F    ++A +   L ++Y+ SG  + AR++
Sbjct: 578 IFELEPENAGMYVLLSNIYASSGKWRDARKM 608



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 14/248 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + G    A   F     +    W++ L  Y S GG  +E L+++ E+   G  
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY-SQGGCSEETLQLFIEMGRCGEW 380

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L  C  + A   G+++H  LI+ G+     +  AL+  Y KC ++E A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+ +  D + WN +I    R+   + A+++F  M+ +S K    T+V +L AC+  G 
Sbjct: 441 FEEMEE-RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499

Query: 412 FHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +G        H + + +  E       C+I +  R  +L  A    D MKD      +
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEH----YTCMIDLLGRAGRLAEA---HDLMKDMPFEPDS 552

Query: 467 SMISSYTG 474
           +M  +  G
Sbjct: 553 TMWGALLG 560


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/822 (31%), Positives = 431/822 (52%), Gaps = 86/822 (10%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            ++ LK C +  +F +G  VH  L +     D     +L++ Y KC   E A  +F  +  
Sbjct: 70   SLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGS 129

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              D + W+ ++     N     A+  F +M  +             +AC+       G  
Sbjct: 130  SRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDS 189

Query: 418  IHGYVLKSA-LESNLSVCNCLISMYSRN-NKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            I G+V+K+  L+S++ V   LI M+ +    L  A +VF+ M + N  +W  MI+     
Sbjct: 190  IFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            GY   A  LF  M  S                                   G+ P+  ++
Sbjct: 250  GYAGEAIDLFLDMIFS-----------------------------------GYEPDRFTL 274

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDN 592
            S V+ A   + LL  G++ H   +R+GL  D  VG  L++MY K   +  +  A+++FD 
Sbjct: 275  SGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ 334

Query: 593  MKNRNIVAWNSLISGYC------------FKGLFVN--------------------AKKM 620
            + + N+ +W ++I+GY             F+G+ +                     A ++
Sbjct: 335  ILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRI 394

Query: 621  LNQMEEEEIKPDLVS----WNSLVSGYSIWGQ---SKEALVIIHHMKNSGIYPNVVTWTS 673
              Q+    +K    S     NSL+S Y+  G+   +++A  I+          N++++ +
Sbjct: 395  GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFE-------KNLISYNT 447

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I    +N N  E+L+ F +++ + +  ++ T +SLL     +G +  G++IH   +K+G
Sbjct: 448  VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSG 507

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
               +  V   LI MYS+ GN++SA +VF    ++ + SW  +I GFA +G   +A+ LFH
Sbjct: 508  LKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFH 567

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            ++LE G +P+ +T+ A+L+AC + GLV EGWK+F SM T++ +IP +EHY+C+VD+LG++
Sbjct: 568  KMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRS 627

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L EA  FI +MP+K DA +W   LG+CR+HG+LE  + A++ + + EP + A Y L+ 
Sbjct: 628  GSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLS 687

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            NL A  ++W++V  +R +M E  +      SW++++  VH F      HP   EIY EL 
Sbjct: 688  NLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQ 747

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
            +L  ++KKLGYVP+   V  D++EE+K K+L  H+EK+A+ +GL+ T    PIRV KN R
Sbjct: 748  NLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLR 807

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +C DCH+A KY+S+  GREI +RD  RFHH ++G CSCN+ W
Sbjct: 808  ICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 224/488 (45%), Gaps = 45/488 (9%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           GD  SA K F     R+   W+  +     FG    E ++++ ++   G       L+ +
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFG-YAGEAIDLFLDMIFSGYEPDRFTLSGV 277

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR---DVESANKLFSEVSD 357
           +  C  +    LG ++H+  I+ G   D  + C L+N Y KC     + +A K+F ++ D
Sbjct: 278 ISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILD 337

Query: 358 LEDDLLWNEIIMVKLRNEKW-ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             +   W  +I   ++   + E A+ LFR M  +       T    L+ACA + A   G+
Sbjct: 338 -HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+  + +K    S   V N LISMY+R+ +++ A + FD + + NL S+N++I +Y    
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  LFN++    +     T+  LLSG  + G+                        
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT------------------------ 492

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
                      +  G + H  ++++GL  +  V  +L+ MY +   +++A +VF++M++R
Sbjct: 493 -----------IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDR 541

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+++W S+I+G+   G    A ++ ++M EE ++P+ V++ +++S  S  G   E     
Sbjct: 542 NVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHF 601

Query: 657 HHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
             M    G+ P +  +  ++    ++ +  E+++F   M     K ++    + L  C  
Sbjct: 602 KSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPY---KADALVWRTFLGACRV 658

Query: 716 LGLLQNGK 723
            G L+ GK
Sbjct: 659 HGNLELGK 666



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 214/494 (43%), Gaps = 73/494 (14%)

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           ++ ++ N +   AI     M    +    +T    L+ C +  +F  G  +H  + +S L
Sbjct: 38  LIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDL 97

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
           + +    N LIS+YS+  + E AT +F  M    +L SW++M+S +             N
Sbjct: 98  QLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFAN-----------N 146

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            M                        ++ +LT +  +++ G+ PN    +   +A +   
Sbjct: 147 NMG-----------------------FRALLTFVDMIEN-GYYPNEYCFAAATRACSTAE 182

Query: 547 LLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDC-LQNAQEVFDNMKNRNIVAWNSL 604
            +  G    G++++ G L  D+ VG  L+DM+VK    L +A +VF+ M  RN V W  +
Sbjct: 183 FVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLM 242

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHM 659
           I+     G    A  +   M     +PD  + + ++S  +     + GQ   +  I H +
Sbjct: 243 ITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302

Query: 660 K-----------------------------NSGIYPNVVTWTSLISGSLQNENY-RESLK 689
                                         +  +  NV +WT++I+G +Q   Y  E+L 
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALD 362

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            F  M    + PN  T SS L+ C  L  L+ G+++    +K GF     VA  LI MY+
Sbjct: 363 LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYA 422

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           +SG +  AR+ F     K L S+N +I  +A   N +EA+ LF+E+ + G    A TF +
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482

Query: 810 LLAACKNSGLVEEG 823
           LL+   + G + +G
Sbjct: 483 LLSGAASIGTIGKG 496



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 3/230 (1%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  SLI  Y   G    A KAF + F ++   +++ ++ Y       +E LE++ E+  +
Sbjct: 413 VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK-NLNSEEALELFNEIEDQ 471

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G+   +     +L     +     G ++HA +IK G   +  +  AL++ Y +C ++ESA
Sbjct: 472 GMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESA 531

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            ++F ++ D  + + W  II    ++     A++LF +M     +    T + +L AC+ 
Sbjct: 532 FQVFEDMED-RNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSH 590

Query: 409 VGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           VG  +EG K       +  +   +    C++ +  R+  L  A +  +SM
Sbjct: 591 VGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSM 640



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 3/217 (1%)

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
           + N    T  +   + N    +++     M  +   P+  T S  L+ C        G  
Sbjct: 28  FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR-KSANKTLASWNCMIMGFAIYG 783
           +H    ++    D+     LI +YSK G  + A  +FR   +++ L SW+ M+  FA   
Sbjct: 88  VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNN 147

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            G  A+L F +++E G+ P+   F A   AC  +  V  G   F  +     +   +   
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVG 207

Query: 844 SCMVDLLGKA-GYLDEAWDFIRTMPFKPDATIWGALL 879
             ++D+  K  G L  A+     MP + +A  W  ++
Sbjct: 208 CGLIDMFVKGRGDLVSAFKVFEKMP-ERNAVTWTLMI 243


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/863 (30%), Positives = 440/863 (50%), Gaps = 72/863 (8%)

Query: 245  SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
            SA + F       +  WSS +  Y S     ++ L  +  +    V     +L ++LK C
Sbjct: 55   SARRVFDEIPDPCHVSWSSLVTAY-SNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-C 112

Query: 305  TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
                 F  G ++HA  +  G   D+ +  AL+  YG    V+ A  +F E     + + W
Sbjct: 113  APDAGF--GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSW 170

Query: 365  NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            N ++   ++N++  +A+K+F EM +   +        ++ AC        G+++H  V++
Sbjct: 171  NGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIR 230

Query: 425  SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
            +  + ++   N L+ MYS+                               LG + +A  +
Sbjct: 231  TGYDKDVFTANALVDMYSK-------------------------------LGDIRMAAVV 259

Query: 485  FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
            F K+     + D+++WN  +SG   HG  Q+ L LL  M+S G  PN  ++S +L+A   
Sbjct: 260  FGKVP----ETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315

Query: 545  LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
                  GR+ HG++++   D D Y+   L+DMY K+  L +A++VFD +  R++V WN+L
Sbjct: 316  SGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNAL 375

Query: 605  ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV-SGYSIWGQS----------KEAL 653
            ISG         A  +  +M +E    +  +  +++ S  S+   S          K   
Sbjct: 376  ISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGF 435

Query: 654  VIIHHMKNS---------------------GIYPNVVTWTSLISGSLQNENYRESLKFFI 692
            +   H+ N                      G Y +++ +TS+I+   Q ++  +++K F+
Sbjct: 436  LSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSY-DIIAFTSMITALSQCDHGEDAIKLFM 494

Query: 693  QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
            +M ++ + P+   +SSLL  C  L   + GK++H   +K  F+ D +    L+  Y+K G
Sbjct: 495  EMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCG 554

Query: 753  NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            +++ A   F     K + SW+ MI G A +G+GK A+ +FH +++    P+ IT T++L 
Sbjct: 555  SIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLC 614

Query: 813  ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            AC ++GLV+E  +YF+SM   + I  T EHY+CM+DLLG+AG LD+A + + +MPF+ +A
Sbjct: 615  ACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNA 674

Query: 873  TIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
             +WGALL + R+H   E   +A+ +LF LEP  S  + L+ N  A +  W+DV ++R  M
Sbjct: 675  AVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLM 734

Query: 933  DEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVY 992
             +  VK     SW+++   VH F      HP   +IY +L  L   M K GYVP+     
Sbjct: 735  KDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDL 794

Query: 993  QDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGRE 1052
             D+D+ EK  +L  H+E+LA+ + L+ T + APIRV KN R+C DCH A K++S +  RE
Sbjct: 795  HDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSRE 854

Query: 1053 IFLRDGARFHHFREGECSCNDCW 1075
            I +RD  RFHHFR+G CSC D W
Sbjct: 855  IIIRDINRFHHFRDGACSCRDYW 877



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 174/679 (25%), Positives = 303/679 (44%), Gaps = 83/679 (12%)

Query: 295 RILTIILKLCTKLMA---FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
           R L  I  L T+  A      G  +HA L+K G  F V  +  L++FY KCR   SA ++
Sbjct: 2   RSLETIGPLLTRYAATQSLLQGAHIHAHLLKSGL-FAV-FRNHLLSFYSKCRLPGSARRV 59

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+ D    + W+ ++     N    +A+  FR M+  S +  +  ++ ++  CA    
Sbjct: 60  FDEIPD-PCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRC-NEFVLPVVLKCAPDAG 117

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS 470
           F  G Q+H   + + L  ++ V N L++MY     ++ A  VFD    + N  SWN ++S
Sbjct: 118 F--GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMS 175

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
           +Y        A  +F +M           W                          G +P
Sbjct: 176 AYVKNDRCSHAVKVFGEM----------VWG-------------------------GVQP 200

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           N    S V+ A T  R L+ GR+ H  ++R G D D++   +L+DMY K   ++ A  VF
Sbjct: 201 NEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVF 260

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL----------- 639
             +   ++V+WN+ ISG    G   +A ++L QM+   + P++ + +S+           
Sbjct: 261 GKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFN 320

Query: 640 ----VSGYSIWGQSKE----ALVIIHHMKNSGIYP------------NVVTWTSLISGSL 679
               + G+ +   +      A  ++      G+              ++V W +LISG  
Sbjct: 321 LGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCS 380

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
               + E+L  F +M++E    N TT++++L++   L  + + +++H L  K GF+ D++
Sbjct: 381 HGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSH 440

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
           V  GLID Y K   L  A  VF K  +  + ++  MI   +   +G++AI LF E+L  G
Sbjct: 441 VVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 500

Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             PD    ++LL AC +    E+G K   +       +  +   + +V    K G +++A
Sbjct: 501 LDPDPFVLSSLLNACASLSAYEQG-KQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDA 559

Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
                 +P K     W A++G    HGH + A     R+  ++   S N+  M ++L   
Sbjct: 560 DLAFSGLPEK-GVVSWSAMIGGLAQHGHGKRALDVFHRM--VDEHISPNHITMTSVLCAC 616

Query: 920 NRW---EDVERLRHSMDEV 935
           N     ++ +R  +SM E+
Sbjct: 617 NHAGLVDEAKRYFNSMKEM 635



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 203/469 (43%), Gaps = 41/469 (8%)

Query: 194 GF-CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFF 251
           GF C +N     R L + +  HA +I+ G  ++ D     +L+  Y + GD   AA  F 
Sbjct: 204 GFSCVVNACTGSRDLEAGRKVHAMVIRTG--YDKDVFTANALVDMYSKLGDIRMAAVVFG 261

Query: 252 LYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFW 311
                    W++F+       G  Q  LE+  ++   G++     L+ ILK C    AF 
Sbjct: 262 KVPETDVVSWNAFISGC-VLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFN 320

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG ++H  ++K   D D ++   L++ Y K   ++ A K+F  +    D +LWN +I   
Sbjct: 321 LGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQ-RDLVLWNALISGC 379

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
               +   A+ LF  M+         T+  +L++ A + A  + +Q+H    K    S+ 
Sbjct: 380 SHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDS 439

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N LI  Y + + L  A RVF+    +++ ++ SMI++ +   + + A  LF +M   
Sbjct: 440 HVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRK 499

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
            + PD                                      +S +L A   L   + G
Sbjct: 500 GLDPDPFV-----------------------------------LSSLLNACASLSAYEQG 524

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           ++ H ++++     D++ G +L+  Y K   +++A   F  +  + +V+W+++I G    
Sbjct: 525 KQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQH 584

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           G    A  + ++M +E I P+ ++  S++   +  G   EA    + MK
Sbjct: 585 GHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMK 633


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/847 (29%), Positives = 439/847 (51%), Gaps = 68/847 (8%)

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            R    W++ ++   +  G   + + ++ E+  +G++     L   LK C+  MA  LG +
Sbjct: 176  RDVVSWTALIQGLVA-EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +HA   K G   D+ +  AL++ Y KC ++E A+K+F  + + ++D+ WN ++    +  
Sbjct: 235  MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPE-QNDVTWNVLLNGYAQRG 293

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
                 +KLF  M     K    T+  +L+ CA      +G+ IH  ++K   E N  +  
Sbjct: 294  DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             L+ MYS+      A  VF ++K  ++  W+++I+     G  + +  LF+         
Sbjct: 354  GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH--------- 404

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                                   L+R   +L   PN  ++  +L A T    L+YG+  H
Sbjct: 405  -----------------------LMRLGDTL---PNQYTICSLLSAATNTGNLQYGQSIH 438

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
              + + G + D+ V  +L+ MY+KN C+ +  +++++M +R++++WN+ +SG    G++ 
Sbjct: 439  ACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYD 498

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIHHMKNSGI------ 664
                +   M EE   P++ ++ S++   S      +G+   A +I + + ++        
Sbjct: 499  RPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALI 558

Query: 665  --------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                  ++ TWT +I+   Q     ++L +F QMQQE +KPN  
Sbjct: 559  DMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEF 618

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T++  L  C  L  L+ G+++H +  K+G + D +V + L+DMY+K G ++ A  +F   
Sbjct: 619  TLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL 678

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              +   +WN +I G+A  G G +A+  F  +L+ G  PD +TFT +L+AC + GLVEEG 
Sbjct: 679  IRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGK 738

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            ++F+SM  D+ I PT++H +CMVD+LG+ G  DE  DFI+ M    +A IW  +LG+ ++
Sbjct: 739  EHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKM 798

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H +L   E A+ +LF+L+P   ++Y L+ N+ A   RW+DV+R+R  M   GVK     S
Sbjct: 799  HNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCS 858

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            W++ +  VH F +    HP   EI+ +L  L  E+  + YVP T  V  ++ E EK + L
Sbjct: 859  WVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENL 918

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+E+LA+ + L+ T S   IR+ KN R+C DCH   K++S +  +EI +RD  RFHHF
Sbjct: 919  RFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHF 978

Query: 1065 REGECSC 1071
            + G CSC
Sbjct: 979  KNGACSC 985



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 156/631 (24%), Positives = 276/631 (43%), Gaps = 69/631 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C    +  +   +H  ++K   + D HL  +L+N Y KCR    A  + +++ D  
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD-R 176

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + W  +I   +      ++I LF+EMQ         T+   L+AC+   A   GKQ+H
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
               K  L  +L V + L+ +Y++  ++ELA+++F  M + N                  
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQN------------------ 278

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                             +TWN LL+G+   G    VL L   M  L  + N  +++ VL
Sbjct: 279 -----------------DVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVL 321

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
           +     + LK G+  H  I++ G + + ++G  L+DMY K     +A  VF  +K  +IV
Sbjct: 322 KGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIV 381

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALV 654
            W++LI+    +G    + K+ + M   +  P+  +  SL+S     G   +GQS  A V
Sbjct: 382 VWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACV 441

Query: 655 ---------------IIHHMKNSGIYP-----------NVVTWTSLISGSLQNENYRESL 688
                          +  +MKN  ++            ++++W + +SG      Y   L
Sbjct: 442 WKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPL 501

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
             F  M +E   PN  T  S+L +C  L  +  G+++H   +KN    + +V T LIDMY
Sbjct: 502 TIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMY 561

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
           +K   L+ A   F + + + L +W  +I  +A    G++A+  F ++ + G +P+  T  
Sbjct: 562 AKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLA 621

Query: 809 ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
             L+ C +   + EG +   SM      +  +   S +VD+  K G ++EA      +  
Sbjct: 622 GCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-I 679

Query: 869 KPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
           + D   W  ++     +G    A  A R + 
Sbjct: 680 RRDTIAWNTIICGYAQNGQGNKALTAFRMML 710



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 216/508 (42%), Gaps = 83/508 (16%)

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           S+K   +    ML+ CA   +    K IHG ++K  +  +  +   L+++Y++      A
Sbjct: 107 SSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYA 166

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             V   M D ++ SW ++I      G+ + +  LF +                       
Sbjct: 167 RLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE----------------------- 203

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                       MQ+ G  PN  +++  L+A +    L  G++ H    + GL  DL+VG
Sbjct: 204 ------------MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVG 251

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           ++L+D+Y K   ++ A ++F  M  +N V WN L++GY  +G      K+   M E ++K
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311

Query: 631 PDLVSWNSLVSG-----------------------------------YSIWGQSKEALVI 655
            +  +  +++ G                                   YS  G + +A+ +
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGV 371

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
              +K     P++V W++LI+   Q     ES+K F  M+  D  PN  T+ SLL     
Sbjct: 372 FKTIKK----PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            G LQ G+ IH    K GF  D  V+  L+ MY K+G +    +++    ++ L SWN  
Sbjct: 428 TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAY 487

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY----FDSMS 831
           + G    G     + +F+ +LE GF P+  TF ++L +C     V  G +       +  
Sbjct: 488 LSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL 547

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
            D N + T      ++D+  K  YL++A
Sbjct: 548 DDNNFVCT-----ALIDMYAKCMYLEDA 570



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 203/479 (42%), Gaps = 74/479 (15%)

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           S +L+     R L   +  HG I+++ ++ D ++  SL+++Y K      A+ V   M +
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------------ 631
           R++V+W +LI G   +G   ++  +  +M+ E I P                        
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 632 -----------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                      DL   ++LV  Y+  G+ + A  +   M       N VTW  L++G  Q
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQ----NDVTWNVLLNGYAQ 291

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
             +    LK F  M + D+K N  T++++L+ C     L+ G+ IH L +K G+  + ++
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             GL+DMYSK G    A  VF+      +  W+ +I      G  +E+I LFH +     
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411

Query: 801 QPDAITFTALLAACKNSGLVEEG-------WKY-FDSMSTDYNIIPTI-----------E 841
            P+  T  +LL+A  N+G ++ G       WKY F++     N + T+           +
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTK 471

Query: 842 HYSCMV--DLLGKAGYLDEAWD---FIRTMP---------FKPDATIWGALLGSCRIHGH 887
            Y  MV  DL+    YL    D   + R +          F P+   + ++LGSC     
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFD 531

Query: 888 LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
           + Y       + K    +  N+ +   L+ M  +   +E    + + + V+ +  W+ I
Sbjct: 532 VHYGRQVHAHIIK-NQLDDNNF-VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVI 588



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 5/297 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           +S HA + K G  + +D  V  +L+  Y++ G      K +     R    W+++L    
Sbjct: 435 QSIHACVWKYG--FETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
             G      L ++  +  +G I        IL  C+ L     G +VHA +IK   D + 
Sbjct: 493 DCG-MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN 551

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  AL++ Y KC  +E A+  F+ +S + D   W  II    +  + E A+  FR+MQ 
Sbjct: 552 FVCTALIDMYAKCMYLEDADVAFNRLS-VRDLFTWTVIITNYAQTNQGEKALNYFRQMQQ 610

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              K    T+   L  C+ + +   G+Q+H  V KS   S++ V + L+ MY++   +E 
Sbjct: 611 EGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           A  +F+++   +  +WN++I  Y   G  + A + F  M    I PD +T+  +LS 
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 691 FIQMQQEDIKPNSTT---------MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
           F   + ED K N             SS+L+ C     L   K IH L +K+    D+++ 
Sbjct: 91  FEHQKTEDAKGNQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLW 150

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             L+++Y+K      AR V  K  ++ + SW  +I G    G   ++I LF E+   G  
Sbjct: 151 VSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM 210

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
           P+  T    L AC     ++ G K   + +    ++  +   S +VDL  K G ++ A  
Sbjct: 211 PNEFTLATGLKACSLCMALDLG-KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASK 269

Query: 862 FIRTMPFKPDATIWGALL 879
               MP + D T W  LL
Sbjct: 270 MFIGMPEQNDVT-WNVLL 286


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/798 (33%), Positives = 423/798 (53%), Gaps = 84/798 (10%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            ++HA L+  G   ++ L   L+N Y    D+  +   F  +   ++   WN II   +R 
Sbjct: 40   KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK-KNIFSWNSIISAYVRF 98

Query: 375  EKWENAI----KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             K+  A+    +LF        +    T   +L+AC    +  +GK++H  V K   E +
Sbjct: 99   GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDD 155

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
            + V   L+ +YSR                                G +DVA  +F  M  
Sbjct: 156  VFVAASLVHLYSR-------------------------------YGVLDVAHKVFVDMPV 184

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                 D+ +WN ++SG   +G+    L +L  M+  G + +  +V+ +L    +   +  
Sbjct: 185  K----DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY-- 608
            G   H ++L++GLD D++V  +L++MY K   LQ+AQ VFD M+ R++V+WNS+I+ Y  
Sbjct: 241  GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300

Query: 609  ---------CFKGL-----------FVNAKKMLNQMEEEEIK--------------PDLV 634
                      FKG+            V+   + +Q+ ++ I                D+V
Sbjct: 301  NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
              N+LV+ Y+  G    A  +   +       + ++W +L++G  QN    E++  +  M
Sbjct: 361  IGNALVNMYAKLGYMNCAHTVFDQLPRK----DTISWNTLVTGYTQNGLASEAIDAYNMM 416

Query: 695  QQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            ++  D  PN  T  S++     +G LQ G +IH   +KN    D +VAT LID+Y K G 
Sbjct: 417  EECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            L+ A  +F +    T   WN +I    I+G G+EA+ LF ++L    + D ITF +LL+A
Sbjct: 477  LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C +SGLV+EG K FD M  +Y I P+++HY CMVDLLG+AGYL++A++ +R MP +PDA+
Sbjct: 537  CSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            IWGALL +C+I+G+ E   +AS RL +++  N   Y L+ N+ A + +WE V ++R    
Sbjct: 597  IWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLAR 656

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            + G++    WS + +     VF      HP   EIY EL  L ++MK LGYVPD   VYQ
Sbjct: 657  DRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQ 716

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            DI+E+EK ++L SH+E+LAI +G++ T  R+PIR+ KN RVC DCH A KY+S +  REI
Sbjct: 717  DIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREI 776

Query: 1054 FLRDGARFHHFREGECSC 1071
             +RD  RFHHF++G CSC
Sbjct: 777  VVRDSNRFHHFKDGICSC 794



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 171/663 (25%), Positives = 291/663 (43%), Gaps = 97/663 (14%)

Query: 179 TDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS--LIFH 236
           T +L K A  + + +    +N T K          HA ++  GK   S ++V S  LI  
Sbjct: 16  TTSLHKDADFNALFNSCVNVNATKKL---------HALLLVFGK---SQNIVLSTKLINL 63

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE------VQELLEVWGELHGKGV 290
           Y+  GD + +   F     ++   W+S +  Y  FG        V +L  + G  H +  
Sbjct: 64  YVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPD 123

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
            +       ILK C  L+    G +VH  + K GF+ DV +  +L++ Y +   ++ A+K
Sbjct: 124 FY---TFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHK 177

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F ++  ++D   WN +I    +N     A+ +   M+    K  + T+  +L  CA+  
Sbjct: 178 VFVDMP-VKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSD 236

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
               G  IH +VLK  L+S++ V N LI+MYS+  +L+ A  VFD M+  +L SWNS+I+
Sbjct: 237 DVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
           +Y        A   F  M    I+PD++T   L S                         
Sbjct: 297 AYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS------------------------- 331

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                  +   +++ R+    R   G+++R   LD D+ +G +L++MY K   +  A  V
Sbjct: 332 -------IFSQLSDQRI---SRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTV 381

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQ 648
           FD +  ++ ++WN+L++GY   GL   A    N MEE  +  P+  +W S++  YS  G 
Sbjct: 382 FDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGA 441

Query: 649 SKEALVIIHHMKNSGIYPNV-------------------------------VTWTSLISG 677
            ++ + I   +  + +Y +V                               V W ++I+ 
Sbjct: 442 LQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS 501

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              +    E+L+ F  M  E +K +  T  SLL  C   GL+  G++   +  K   IK 
Sbjct: 502 LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKP 561

Query: 738 AYVATG-LIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHEL 795
           +    G ++D+  ++G L+ A E+ R    +  AS W  ++    IYGN +   L    L
Sbjct: 562 SLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRL 621

Query: 796 LET 798
           LE 
Sbjct: 622 LEV 624


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/823 (31%), Positives = 424/823 (51%), Gaps = 80/823 (9%)

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            R+   W++ +  Y   G   + L+  W  ++ +G+         +L  C+ L     G E
Sbjct: 73   RNVVSWNAMIAAYAQNGHSTEALVLYW-RMNLQGLGTDHVTFVSVLGACSSLAQ---GRE 128

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +H  +   G D    L  AL+  Y +   V  A ++F  +    D+  WN +I+   ++ 
Sbjct: 129  IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ-TRDETSWNAVILAHSQSG 187

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             W  A+++F+EM+    K  S T + ++   +      EG++IH  ++ +  +S+L V  
Sbjct: 188  DWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVAT 246

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             LI+MY +      A  VFD MK                                   + 
Sbjct: 247  ALINMYGKCGSSHEAREVFDKMK-----------------------------------KR 271

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D+++WN ++  +  +G +   L L + +   GF+   ++   +L A + ++ L  GR  H
Sbjct: 272  DMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVH 331

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
             +IL  GLD ++ V T+L++MY K   L+ A++VF+ MKNR                   
Sbjct: 332  SHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR------------------- 372

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                            D V+W++L+  Y+  G  K+A          G   + + W ++I
Sbjct: 373  ----------------DAVAWSTLIGAYASNGYGKDARKARKVFDRLG-SRDTICWNAMI 415

Query: 676  SGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            +  +QN     ++K F +M     +KP++ T  ++L+ C  LG L   K +H    ++  
Sbjct: 416  TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL 475

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              +  V   LI+MY++ G+L+ A  +F  +  KT+ SW  M+  F+ YG   EA+ LF E
Sbjct: 476  ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQE 535

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +   G +PD +T+T++L  C + G +E+GW+YF  M+  + + PT +H++ MVDLLG++G
Sbjct: 536  MDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSG 595

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             L +A + + +MPF+PD   W   L +CRIHG LE  E A+ R+++L+P ++A Y  M N
Sbjct: 596  RLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSN 655

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A    WE V  +R  M+E G+K +   S+I++D  +H FS+ G  HP T EI  EL  
Sbjct: 656  IYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTR 715

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTR 1033
            L   M+  GYVPDT+ V  D+ E EK  +LL H+EK+AI +GL+ ++ S  PIRV+KN R
Sbjct: 716  LHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLR 775

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHF-REGECSCNDCW 1075
            VCSDCHTA K+++ + GR+I LRD  RFH F  +G+CSC D W
Sbjct: 776  VCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  182 bits (462), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 214/416 (51%), Gaps = 11/416 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  +L+  Y  FG    A + F    +R    W++ +  + S  G+    L ++ E+   
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH-SQSGDWSGALRIFKEMKCD 202

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
                +  + +I    T  +    G ++HA ++  GFD D+ +  AL+N YGKC     A
Sbjct: 203 MKPNSTTYINVISGFSTPEV-LPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEA 261

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            ++F ++    D + WN +I   ++N  +  A++L++++     K    T V +L AC+ 
Sbjct: 262 REVFDKMKK-RDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSS 320

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           V A  +G+ +H ++L+  L+S ++V   L++MY++   LE A +VF++MK+ +  +W+++
Sbjct: 321 VKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTL 380

Query: 469 ISSYTGLGY---VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ- 524
           I +Y   GY      A  +F+++ S     D I WN +++ +  +G     + + R M  
Sbjct: 381 IGAYASNGYGKDARKARKVFDRLGSR----DTICWNAMITTYVQNGCAVAAMKIFREMTG 436

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
           + G +P+  +   VL+A   L  L   +  H  I  + L+ ++ V  +L++MY +   L+
Sbjct: 437 AAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE 496

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
            A+ +F   K + +V+W ++++ +   G +  A  +  +M+ E +KPD V++ S++
Sbjct: 497 EAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSIL 552



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 200/416 (48%), Gaps = 33/416 (7%)

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           +P+  +   VL + +    +  GR  H  I  +  + D  VG +L+ MY K D L +A+ 
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 589 VFDNM--KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           VF++M  + RN+V+WN++I+ Y   G    A  +  +M  + +  D V++ S++   S  
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 647 GQSKE------------------ALVIIH----------HMKNSGIYPNVVTWTSLISGS 678
            Q +E                  ALV ++           M  S    +  +W ++I   
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH 183

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            Q+ ++  +L+ F +M+  D+KPNSTT  +++       +L  G++IH   + NGF  D 
Sbjct: 184 SQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDL 242

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            VAT LI+MY K G+   AREVF K   + + SWN MI  +   G+  EA+ L+ +L   
Sbjct: 243 VVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDME 302

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
           GF+    TF ++L AC +   + +G +   S   +  +   +   + +V++  K G L+E
Sbjct: 303 GFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGSLEE 361

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
           A      M  + DA  W  L+G+   +G+ + A  A +   +L   ++  +N M+ 
Sbjct: 362 ARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMIT 416



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/378 (17%), Positives = 148/378 (39%), Gaps = 57/378 (15%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L   +  + L+  +  H+ +++ G + +   +  +L+  Y + G    A K F    +R
Sbjct: 314 ILGACSSVKALAQGRLVHSHILERG-LDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR 372

Query: 257 SYADWSSFLEDYES--FGGEVQELLEVWGELHGKGVIFRSRILTI--------------- 299
               WS+ +  Y S  +G + ++  +V+  L  +  I  + ++T                
Sbjct: 373 DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFR 432

Query: 300 -----------------ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
                            +L+ C  L        +HA + +   + +V +   L+N Y +C
Sbjct: 433 EMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARC 492

Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
             +E A +LF+   + +  + W  ++    +  ++  A+ LF+EM     K    T   +
Sbjct: 493 GSLEEAERLFAAAKE-KTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSI 551

Query: 403 LQACAKVGAFHEG-------KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           L  C   G+  +G        ++HG      L         ++ +  R+ +L  A  + +
Sbjct: 552 LFVCTHGGSLEQGWRYFTDMAELHG------LAPTADHFAAMVDLLGRSGRLFDAKELLE 605

Query: 456 SMK-DHNLSSWNSMISS---YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           SM  + +  +W + +++   +  L   + A     +++ S   P I   N     +  HG
Sbjct: 606 SMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNI----YAAHG 661

Query: 512 SYQNVLTLLRGMQSLGFR 529
            ++ V ++ + M+  G +
Sbjct: 662 MWEKVASVRKKMEERGLK 679


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Cucumis sativus]
          Length = 776

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/738 (34%), Positives = 408/738 (55%), Gaps = 37/738 (5%)

Query: 340  GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
            G+C   ESA  +F+ +      + +N +I   L N K++ A K+F +M       IS  +
Sbjct: 74   GQC---ESALSVFNGMRR-RSTVTYNAMISGYLSNNKFDCARKVFEKM--PDRDLISWNV 127

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
              ML    K G     + +         E ++   N ++S +++N  +E A ++FD M  
Sbjct: 128  --MLSGYVKNGNLSAARAL----FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLV 181

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             N  SWN ++S+Y   G ++ A  LF+    S++  +I++WNCL+ G+       +  +L
Sbjct: 182  KNEISWNGLLSAYVQNGRIEDARRLFD----SKMDWEIVSWNCLMGGYVRKKRLDDARSL 237

Query: 520  LRGMQSLGFRPNGSSVS--VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
               M      P    +S  +++    +  LL   R     +       D++  T+++  +
Sbjct: 238  FDRM------PVRDKISWNIMITGYAQNGLLSEARR----LFEELPIRDVFAWTAMVSGF 287

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            V+N  L  A  +F+ M  +N V+WN++I+GY        A+++ +QM       +  SWN
Sbjct: 288  VQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR----NTSSWN 343

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            ++V+GY+  G   +A ++   M       + ++W ++ISG  Q+    E+L  FI+M+++
Sbjct: 344  TMVTGYAQCGNIDQAKILFDEMPQR----DCISWAAMISGYAQSGQSEEALHLFIKMKRD 399

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
                N + ++  L +C  +  L+ GK++H   +K GF         L+ MY K G+++ A
Sbjct: 400  GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEA 459

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             +VF     K + SWN MI G+A +G GKEA+ LF E ++   +PD +T   +L+AC ++
Sbjct: 460  FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHT 518

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLV++G +YF+SM  +Y I    +HY+CM+DLLG+AG LDEA + +++MPF PDA  WGA
Sbjct: 519  GLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGA 578

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+ RIHG  E  E A+ ++F++EP NS  Y L+ NL A S RW +V  +R  M + GV
Sbjct: 579  LLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGV 638

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            K V  +SW++I    H+F+     HP    IY  L  L  E+KK G+V  T+ V  D++E
Sbjct: 639  KKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEE 698

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            EEK  +L  H+EKLA+ +G++      PIRVIKN RVC DCH A K++S +  R+I +RD
Sbjct: 699  EEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRD 758

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFHHF EG CSC D W
Sbjct: 759  SNRFHHFSEGSCSCGDYW 776



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 136/563 (24%), Positives = 240/563 (42%), Gaps = 49/563 (8%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  YL    F  A K F     R    W+  L  Y    G +     ++ ++  K V+
Sbjct: 96  AMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVK-NGNLSAARALFNQMPEKDVV 154

Query: 292 -------------FRSRILTIILKLCTKLMAFWLG----------VEVHASLIKRGFDFD 328
                        F      I  ++  K    W G          +E    L     D++
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE 214

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           +     LM  Y + + ++ A  LF  +  + D + WN +I    +N     A +LF E+ 
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEARRLFEELP 273

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                A +  +   +Q     G   E  +I     +   E N    N +I+ Y ++ ++E
Sbjct: 274 IRDVFAWTAMVSGFVQN----GMLDEATRI----FEEMPEKNEVSWNAMIAGYVQSQQIE 325

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A  +FD M   N SSWN+M++ Y   G +D A  LF++M     Q D I+W  ++SG+ 
Sbjct: 326 KARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMP----QRDCISWAAMISGYA 381

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             G  +  L L   M+  G   N S+++  L +  E+  L+ G++ HG +++ G      
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            G +L+ MY K   ++ A +VF+++  ++IV+WN++I+GY   G    A  +   M +  
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMT 500

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRES 687
           IKPD V+   ++S  S  G   + +   + M +N GI  N   +T +I    +     E+
Sbjct: 501 IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF---IKDAYVATGL 744
           L     M+     P++ T  +LL    G   +    E+     +  F     ++ +   L
Sbjct: 561 LNL---MKSMPFYPDAATWGALL----GASRIHGDTELGEKAAEKVFEMEPDNSGMYVLL 613

Query: 745 IDMYSKSGNLKSAREVFRKSANK 767
            ++Y+ SG  +  RE+  K  +K
Sbjct: 614 SNLYAASGRWREVREMRSKMRDK 636



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 170/376 (45%), Gaps = 51/376 (13%)

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
           +S+ +  DI+ WN  +S +   G  ++ L++  GM+           +V   A+    L 
Sbjct: 52  DSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS--------TVTYNAMISGYLS 103

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
               +    +     D DL     ++  YVKN  L  A+ +F+ M  +++V+WN+++SG+
Sbjct: 104 NNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
              G    A+K+ +QM    +  + +SWN L+S Y   G+ ++A      + +S +   +
Sbjct: 164 AQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA----RRLFDSKMDWEI 215

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HC 727
           V+W  L+ G ++ +   ++   F +M   D    +  ++   Q     GLL   + +   
Sbjct: 216 VSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN----GLLSEARRLFEE 271

Query: 728 LCLKNGF----IKDAYVATGLIDM----------------------YSKSGNLKSAREVF 761
           L +++ F    +   +V  G++D                       Y +S  ++ ARE+F
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            +  ++  +SWN M+ G+A  GN  +A +LF E+     Q D I++ A+++    SG  E
Sbjct: 332 DQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMP----QRDCISWAAMISGYAQSGQSE 387

Query: 822 EGWKYFDSMSTDYNII 837
           E    F  M  D  I+
Sbjct: 388 EALHLFIKMKRDGGIL 403



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 176/403 (43%), Gaps = 75/403 (18%)

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           +D D+      +  Y++    ++A  VF+ M+ R+ V +N++ISGY     F  A+K+  
Sbjct: 56  VDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFE 115

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
           +M +     DL+SWN ++SGY   G    A  + + M       +VV+W +++SG  QN 
Sbjct: 116 KMPDR----DLISWNVMLSGYVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNG 167

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              E+ K F QM                                        +K+     
Sbjct: 168 FVEEARKIFDQM---------------------------------------LVKNEISWN 188

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
           GL+  Y ++G ++ AR +F    +  + SWNC++ G+       +A  LF  +       
Sbjct: 189 GLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR---- 244

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D I++  ++     +GL+ E  + F+ +      I  +  ++ MV    + G LDEA   
Sbjct: 245 DKISWNIMITGYAQNGLLSEARRLFEELP-----IRDVFAWTAMVSGFVQNGMLDEATRI 299

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEI-ASRRLFKLEPC-NSANYNLMMNLLAMSN 920
              MP K + + W A+     I G+++  +I  +R LF   P  N++++N M+   A   
Sbjct: 300 FEEMPEKNEVS-WNAM-----IAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCG 353

Query: 921 RWEDVERLRHSMDEVGVKSVLVWSWI--------QIDQIVHVF 955
              ++++ +   DE+  +  + W+ +        Q ++ +H+F
Sbjct: 354 ---NIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLF 393



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 137/301 (45%), Gaps = 8/301 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + G+   A   F     R    W++ +  Y    G+ +E L ++ ++   G I
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQ-SGQSEEALHLFIKMKRDGGI 402

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L   L  C ++ A  LG ++H  L+K GF        AL+  YGKC  +E A  +
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F ++++ +D + WN +I    R+   + A+ LF  M+  + K    T+V +L AC+  G 
Sbjct: 463 FEDITE-KDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVGVLSACSHTGL 520

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH-NLSSWNSMI 469
             +G +    + ++  + +N     C+I +  R  +L+ A  +  SM  + + ++W +++
Sbjct: 521 VDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGF 528
            +    G  ++      K+    ++PD      LLS  +   G ++ V  +   M+  G 
Sbjct: 581 GASRIHGDTELGEKAAEKV--FEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGV 638

Query: 529 R 529
           +
Sbjct: 639 K 639


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/780 (34%), Positives = 418/780 (53%), Gaps = 91/780 (11%)

Query: 309  AFWLGVEVHASLIKRGFDFDVHLKCALMNFY---GKCRDVESANKLFSEVSDLEDDLLWN 365
            +F  G+++HA  I  G    +     L++F+   G    ++ +  LFS++ D  +  +WN
Sbjct: 21   SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI-DCPNLFMWN 79

Query: 366  EIIMVKLRNEKWENAIKLFREMQFSSAKAISR----TIVKMLQACAKVGAFHEGKQIHGY 421
             +I    R++    AI L+  M    AK I+     T   +L +CA++ +   G ++H +
Sbjct: 80   TMIRGYSRSDNPREAIVLYMSM---IAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 136

Query: 422  VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            ++K   ES+L V N LI +YS    L LA  +FD     +L S+N+MI  Y  +   + A
Sbjct: 137  IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 196

Query: 482  WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
              LF +M +S I PD  T+  L S          V ++L         PN          
Sbjct: 197  LCLFGEMQNSGILPDEFTFVALFS----------VCSVLN-------EPN---------- 229

Query: 542  VTELRLLKYGRESHGYILRN--GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM-KNRNI 598
                     G++ H  + +N   +D ++ + ++++DMY K   +  A+ VF  M  +++ 
Sbjct: 230  --------VGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSA 281

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
             AW+S++ GY   G    A+K+ N M E     D++SW +++SGYS  GQ  EAL +   
Sbjct: 282  AAWSSMVCGYARCGEINVARKLFNHMHER----DVISWTAMISGYSQAGQCSEALELFKE 337

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            M+  GI P+ VT  +++S                                    C  LG 
Sbjct: 338  MEALGIKPDEVTLVAVLS-----------------------------------ACARLGA 362

Query: 719  LQNGKEIHCLCLKNG-FIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN--KTLASWNCM 775
               GK ++   ++NG F ++  +   ++DMY+K G++ SA E+FR+     KT   +N M
Sbjct: 363  FDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSM 422

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I G A +G G+ AI +F EL+ TG +PD +TF  +L AC +SGL+EEG K F+SM   Y 
Sbjct: 423  IAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYG 482

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P +EHY CMVDLLG+ G L+EA+D ++ MPF+ ++ IW ALL +CR HG+++  EIA 
Sbjct: 483  IKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAG 542

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            ++L ++E  + A Y L+ N+LA +N+WE+  ++R  M++ G++    WS+I++   +H F
Sbjct: 543  QKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRF 602

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    HP   EI   L  +   +K  GYVP+T  V  DIDEEEK  V+  H+EKLA+ +
Sbjct: 603  VASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAF 662

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GLM       IR++KN R+C+DCH A K +S + GREI +RD  RFHHFR G CSC D W
Sbjct: 663  GLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 231/473 (48%), Gaps = 21/473 (4%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHAS 319
           W++ +  Y S     +E + ++  +  KG+   +      +L  C +L +   G EVH+ 
Sbjct: 78  WNTMIRGY-SRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 136

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           +IK GF+ D+ ++ AL++ Y    ++  A  LF E S + D + +N +I       + E+
Sbjct: 137 IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE-SLVRDLVSYNTMIKGYAEVNQPES 195

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS--ALESNLSVCNCL 437
           A+ LF EMQ S       T V +   C+ +   + GKQIH  V K+  +++SN+ + + +
Sbjct: 196 ALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAI 255

Query: 438 ISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           + MY++   + +A RVF +M    + ++W+SM+  Y   G ++VA  LFN M+    + D
Sbjct: 256 VDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMH----ERD 311

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG-RESH 555
           +I+W  ++SG+   G     L L + M++LG +P+  ++  VL A   L     G R  H
Sbjct: 312 VISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYH 371

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF----DNMKNRNIVAWNSLISGYCFK 611
            YI     + +  +  ++MDMY K   + +A E+F     NMK   +  +NS+I+G    
Sbjct: 372 QYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFV--FNSMIAGLAQH 429

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVT 670
           GL   A  +  ++    +KPD V++  ++      G  +E   +   M N+ GI P +  
Sbjct: 430 GLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEH 489

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           +  ++    +     E+      +Q+   + NS    +LL  C   G ++ G+
Sbjct: 490 YGCMVDLLGRYGCLEEAYDL---VQKMPFEANSVIWRALLSACRTHGNVKIGE 539


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 361/645 (55%), Gaps = 28/645 (4%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N +IS ++ +  + LA   FD   + +  SWN M+++Y   G V+ A  LFN    SR +
Sbjct: 10   NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTE 65

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D+I+WN L+SG+   G       L   M      P    VS        + +  Y R  
Sbjct: 66   WDVISWNALMSGYVQWGKMSEARELFDRM------PGRDVVS------WNIMVSGYARRG 113

Query: 555  HGYILRNGLD----YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
                 R   D     D++  T+++  Y +N  L+ A+ VFD M  RN V+WN++++ Y  
Sbjct: 114  DMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ 173

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
            + +   AK++ N M    +     SWN++++GY+  G  +EA  +   M       + V+
Sbjct: 174  RRMMDEAKELFNMMPCRNV----ASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVS 225

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W ++++   Q     E+L+ FI+M +     N +  + +L TC  +  L+ G ++H   +
Sbjct: 226  WAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI 285

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            + G+    +V   L+ MY K GN++ AR  F +   + + SWN MI G+A +G GKEA+ 
Sbjct: 286  RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 345

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            +F  +  T  +PD IT   +LAAC +SGLVE+G  YF SM  D+ +    EHY+CM+DLL
Sbjct: 346  IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 405

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG L EA D ++ MPF+PD+T+WGALLG+ RIH + E    A+ ++F+LEP N+  Y 
Sbjct: 406  GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 465

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A S +W D  ++R  M+E GVK V  +SWI++   VH FSA    HP   +IY 
Sbjct: 466  LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYA 525

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L   MKK GYV  T  V  D++EEEK  +L  H+EKLA+ YG++      PIRVIK
Sbjct: 526  FLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIK 585

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH A KY+S + GR I LRD  RFHHFR G CSC D W
Sbjct: 586  NLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 203/451 (45%), Gaps = 24/451 (5%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           VE    L     ++DV    ALM+ Y +   +  A +LF  +    D + WN ++    R
Sbjct: 53  VEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPG-RDVVSWNIMVSGYAR 111

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                 A +LF             T   ++   A+ G   E ++    V  +  E N   
Sbjct: 112 RGDMVEARRLFDAAPVRDVF----TWTAVVSGYAQNGMLEEARR----VFDAMPERNAVS 163

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N +++ Y +   ++ A  +F+ M   N++SWN+M++ Y   G ++ A ++F+ M     
Sbjct: 164 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP---- 219

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           Q D ++W  +L+ +   G  +  L L   M   G   N S+ + VL    ++  L+ G +
Sbjct: 220 QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 279

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG ++R G     +VG +L+ MY K   +++A+  F+ M+ R++V+WN++I+GY   G 
Sbjct: 280 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 339

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A ++ + M     KPD ++   +++  S  G  ++ +   + M +  G+      +T
Sbjct: 340 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT 399

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            +I    +     E+      M+    +P+ST   +LL    G   +    E+     + 
Sbjct: 400 CMIDLLGRAGRLAEAHDL---MKDMPFEPDSTMWGALL----GASRIHRNPELGRSAAEK 452

Query: 733 GF---IKDAYVATGLIDMYSKSGNLKSAREV 760
            F    ++A +   L ++Y+ SG  + AR++
Sbjct: 453 IFELEPENAGMYVLLSNIYASSGKWRDARKM 483



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 14/248 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + G    A   F     +    W++ L  Y S GG  +E L+++ E+   G  
Sbjct: 197 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY-SQGGCSEETLQLFIEMGRCGEW 255

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L  C  + A   G+++H  LI+ G+     +  AL+  Y KC ++E A   
Sbjct: 256 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 315

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+ +  D + WN +I    R+   + A+++F  M+ +S K    T+V +L AC+  G 
Sbjct: 316 FEEMEE-RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 374

Query: 412 FHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +G        H + + +  E       C+I +  R  +L  A    D MKD      +
Sbjct: 375 VEKGISYFYSMHHDFGVTAKPEHY----TCMIDLLGRAGRLAEA---HDLMKDMPFEPDS 427

Query: 467 SMISSYTG 474
           +M  +  G
Sbjct: 428 TMWGALLG 435



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 15/180 (8%)

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
           ++D+     +I  ++  G +  AR  F  +  K   SWN M+  +   G  +EA  LF+ 
Sbjct: 3   VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 62

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
             E     D I++ AL++     G + E  + FD M         +  ++ MV    + G
Sbjct: 63  RTEW----DVISWNALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIMVSGYARRG 113

Query: 855 YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP-CNSANYNLMM 913
            + EA       P + D   W A++     +G LE A    RR+F   P  N+ ++N M+
Sbjct: 114 DMVEARRLFDAAPVR-DVFTWTAVVSGYAQNGMLEEA----RRVFDAMPERNAVSWNAMV 168


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/902 (30%), Positives = 463/902 (51%), Gaps = 79/902 (8%)

Query: 210  VKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
            VK  H++    G  ++S  +V +L+   Y + G   SA K F     +    W + +   
Sbjct: 179  VKQVHSRTFYYG--FDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 269  ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
               G E +E + ++ ++H   +     +L+ +L   TK+  F LG ++H  +IK GF  +
Sbjct: 237  SQNGLE-EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295

Query: 329  VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
             ++   L+  Y + R + SA ++FS ++   D + +N +I   ++    + A++LF +MQ
Sbjct: 296  TYVCNGLVALYSRSRKLISAERIFSTMNS-RDGVSYNSLISGLVQQGFSDRALELFTKMQ 354

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                K    T+  +L ACA VGA H+G Q+H + +K+ + +++ +   L+ +YS+   +E
Sbjct: 355  RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVE 414

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A + F + +  N+  WN M+          VA+   + ++ S                 
Sbjct: 415  TAHKFFLTTETENIVLWNVML----------VAYGQLDNLSDS----------------- 447

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                      + R MQ  G  PN  +   +L+  T L  L  G + H ++++ G   ++Y
Sbjct: 448  --------FEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVY 499

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            V + L+DMY K   L  A  +   +   ++V+W ++I+GY    +F  A ++  +ME   
Sbjct: 500  VCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRG 559

Query: 629  IKPDLVSW-----------------------------------NSLVSGYSIWGQSKEAL 653
            I+ D + +                                   N+L+S Y+  G+ +EA 
Sbjct: 560  IQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAY 619

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +    + +     N ++W SL+SG  Q+  + E+L+ F++M + + + N  T  S +   
Sbjct: 620  LAFEKIGD----KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAA 675

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              L  ++ G++IH + LK G+  +  V+  LI +Y+KSG++  A   F   + + + SWN
Sbjct: 676  ASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWN 735

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             MI G++ +G G EA+ LF E+   G  P+ +TF  +L+AC + GLV+EG  YF+SM   
Sbjct: 736  AMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKI 795

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            ++++P  EHY C+VDLLG+AG LD A ++I+ MP   DA IW  LL +C IH ++E  E 
Sbjct: 796  HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A+  L +LEP +SA Y L+ N+ A+S +W   +  R  M + GVK     SWI++   VH
Sbjct: 856  AAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVH 915

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             F A    HP T +IY  + HL     ++GYV D+  +  + ++ +K  +   H+EKLAI
Sbjct: 916  AFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAI 975

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +GL+   +  PIRV+KN RVC+DCH   KY+S +  R I +RD  RFHHF  G CSC D
Sbjct: 976  AFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKD 1035

Query: 1074 CW 1075
             W
Sbjct: 1036 FW 1037



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 179/733 (24%), Positives = 322/733 (43%), Gaps = 91/733 (12%)

Query: 190 CISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKA 249
           C++SG  F  ET +  C  S      + +          ++ SL+ +Y   GD   A K 
Sbjct: 68  CLTSGSLF--ETMRLHCRISKSGFDGEPL----------LIDSLVDNYFRHGDQHGAVKV 115

Query: 250 FFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT-KLM 308
           F    +RS   W+  +  + +     Q +  ++  +  +G+         +LK C    +
Sbjct: 116 FDENSNRSVFSWNKMIHVFVAQKSNFQ-VFCLFRRMLAEGITPNGYTFAGVLKACVGGDI 174

Query: 309 AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
           AF    +VH+     GFD    +   L++ Y K   +ESA K+F+ +  ++D + W  +I
Sbjct: 175 AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC-MKDIVTWVAMI 233

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
               +N   E AI LF +M  S        +  +L A  K+  F  G+Q+H  V+K    
Sbjct: 234 SGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFH 293

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           S   VCN L+++YSR+ KL  A R+F +M   +  S+NS+IS     G+ D A  LF KM
Sbjct: 294 SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM 353

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
               ++PD IT                                   V+ +L A   +  L
Sbjct: 354 QRDCLKPDCIT-----------------------------------VASLLSACASVGAL 378

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
             G + H + ++ G+  D+ +  SL+D+Y K   ++ A + F   +  NIV WN ++  Y
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAY 438

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNS------------------------------ 638
                  ++ ++  QM+ E + P+  ++ S                              
Sbjct: 439 GQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV 498

Query: 639 -----LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
                L+  Y+ +GQ   AL I+  +       +VV+WT++I+G +Q++ + E+L+ F +
Sbjct: 499 YVCSVLIDMYAKYGQLALALRILRRLPED----DVVSWTAMIAGYVQHDMFSEALQLFEE 554

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M+   I+ ++   +S +  C G+  L+ G++IH      GF  D  +   LI +Y++ G 
Sbjct: 555 MEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGR 614

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           ++ A   F K  +K   SWN ++ G A  G  +EA+ +F  +L T  + +  T+ + ++A
Sbjct: 615 IQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISA 674

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
             +   +++G +   SM          E  + ++ L  K+G + +AW     M  + +  
Sbjct: 675 AASLANIKQG-QQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVI 732

Query: 874 IWGALLGSCRIHG 886
            W A++     HG
Sbjct: 733 SWNAMITGYSQHG 745



 Score =  209 bits (531), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 167/639 (26%), Positives = 288/639 (45%), Gaps = 76/639 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C    + +  + +H  + K GFD +  L  +L++ Y +  D   A K+F E S+  
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSN-R 122

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEGK 416
               WN++I V +  +       LFR M          T   +L+AC  VG   AF+  K
Sbjct: 123 SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC--VGGDIAFNYVK 180

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+H        +S+  V N LI +YS+N  +E A +VF+ +   ++ +W +MIS  +  G
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNG 240

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  LF  M++S I P                                       +S
Sbjct: 241 LEEEAILLFCDMHASEIFPTPYV-----------------------------------LS 265

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL A T+++L + G + H  +++ G   + YV   L+ +Y ++  L +A+ +F  M +R
Sbjct: 266 SVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSR 325

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           + V++NSLISG   +G    A ++  +M+ + +KPD ++  SL+S  +  G   + + + 
Sbjct: 326 DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLH 385

Query: 657 HHMKNSGIYP-------------------------------NVVTWTSLISGSLQNENYR 685
            H   +G+                                 N+V W  ++    Q +N  
Sbjct: 386 SHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLS 445

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           +S + F QMQ E + PN  T  S+L+TC  LG L  G++IH   +K GF  + YV + LI
Sbjct: 446 DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLI 505

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
           DMY+K G L  A  + R+     + SW  MI G+  +    EA+ LF E+   G Q D I
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNI 565

Query: 806 TFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            F + ++AC     + +G + +  S +  +    +I   + ++ L  + G + EA+    
Sbjct: 566 GFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN--NALISLYARCGRIQEAYLAFE 623

Query: 865 TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +  K + + W +L+      G+ E A     R+ + E 
Sbjct: 624 KIGDKNNIS-WNSLVSGLAQSGYFEEALQVFVRMLRTEA 661



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/533 (23%), Positives = 230/533 (43%), Gaps = 71/533 (13%)

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           I+L   M+    ++  +  + +L+ C   G+  E  ++H  + KS  +    + + L+  
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y R+     A +VFD   + ++ SWN MI  +                  S  Q      
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVA--------------QKSNFQ------ 142

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL-LKYGRESHGYIL 559
                          V  L R M + G  PNG + + VL+A     +   Y ++ H    
Sbjct: 143 ---------------VFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTF 187

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
             G D    V   L+D+Y KN  +++A++VF+ +  ++IV W ++ISG    GL   A  
Sbjct: 188 YYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAIL 247

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYS----------------IWGQSKE-----ALVIIHH 658
           +   M   EI P     +S++S  +                 WG   E      LV ++ 
Sbjct: 248 LFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYS 307

Query: 659 MKNSGIYP----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                I            + V++ SLISG +Q      +L+ F +MQ++ +KP+  T++S
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVAS 367

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           LL  C  +G L  G ++H   +K G   D  +   L+D+YSK  ++++A + F  +  + 
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETEN 427

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YF 827
           +  WN M++ +    N  ++  +F ++   G  P+  T+ ++L  C + G +  G + + 
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHT 487

Query: 828 DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
             + T + +   +   S ++D+  K G L  A   +R +P + D   W A++ 
Sbjct: 488 HVIKTGFQL--NVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIA 537



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 1/198 (0%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M++  ++ N      LL+ C   G L     +HC   K+GF  +  +   L+D Y + G+
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
              A +VF +++N+++ SWN MI  F    +  +   LF  +L  G  P+  TF  +L A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
           C    +     K   S +  Y    +    + ++DL  K GY++ A      +  K D  
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK-DIV 227

Query: 874 IWGALLGSCRIHGHLEYA 891
            W A++     +G  E A
Sbjct: 228 TWVAMISGLSQNGLEEEA 245


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/815 (33%), Positives = 414/815 (50%), Gaps = 83/815 (10%)

Query: 301  LKLCTKL--MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD- 357
            L+LC  L   +  L   VH ++I  GF    H+   L++ Y K  ++  A +LF E+S+ 
Sbjct: 19   LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78

Query: 358  -------------------------------LEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
                                           + D +++N +I     N    +AI LF +
Sbjct: 79   DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFH-EGKQIHGYVLKSALESNLSVCNCLISMYSR-- 443
            M+    K  + T   +L   A V     +  Q H   LKS      SV N L+S+YS+  
Sbjct: 139  MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198

Query: 444  --NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
               + L  A +VFD + + +  SW +M++ Y   GY D+   L   M+ +     ++ +N
Sbjct: 199  SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNM---KLVAYN 255

Query: 502  CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
             ++SG+   G YQ  L ++R M S G   +  +   V++A     LL+ G++ H Y+LR 
Sbjct: 256  AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315

Query: 562  GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
              D+  +   SL+ +Y K                             C  G F  A+ + 
Sbjct: 316  E-DFSFHFDNSLVSLYYK-----------------------------C--GKFDEARAIF 343

Query: 622  NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
             +M  +    DLVSWN+L+SGY   G   EA +I   MK      N+++W  +ISG  +N
Sbjct: 344  EKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILSWMIMISGLAEN 395

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                E LK F  M++E  +P     S  +++C  LG   NG++ H   LK GF       
Sbjct: 396  GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG 455

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
              LI MY+K G ++ AR+VFR        SWN +I     +G+G EA+ ++ E+L+ G +
Sbjct: 456  NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            PD IT   +L AC ++GLV++G KYFDSM T Y I P  +HY+ ++DLL ++G   +A  
Sbjct: 516  PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES 575

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
             I ++PFKP A IW ALL  CR+HG++E   IA+ +LF L P +   Y L+ N+ A + +
Sbjct: 576  VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQ 635

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            WE+V R+R  M + GVK  +  SWI+++  VH F  +   HP    +Y  L  L  EM++
Sbjct: 636  WEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRR 695

Query: 982  LGYVPDTRCVYQDIDEE-EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            LGYVPDT  V  D++ +  K  +L +H+EK+A+ +GLMK      IR+ KN R C DCH 
Sbjct: 696  LGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHN 755

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              +++S V  R+I LRD  RFHHFR GECSC + W
Sbjct: 756  FFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 236/542 (43%), Gaps = 99/542 (18%)

Query: 393 KAISRTIVKMLQACAKV--GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           +AI+      L+ C  +   +    + +HG ++    +    + N LI +Y ++++L  A
Sbjct: 9   RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYA 68

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            ++FD + + +  +  +M+S Y   G + +A  +F K  +     D + +N +++G   +
Sbjct: 69  RQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEK--APVCMRDTVMYNAMITGFSHN 126

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT-----ELRLLKYGRESHGYILRNGLDY 565
               + + L   M+  GF+P+  + + VL  +      E + +++    H   L++G  Y
Sbjct: 127 NDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF----HAAALKSGAGY 182

Query: 566 DLYVGTSLMDMYVK----NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
              V  +L+ +Y K       L +A++VFD +  ++  +W ++++GY   G F   +++L
Sbjct: 183 ITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELL 242

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
             M++      LV++N+++SGY   G  +EAL ++  M +SGI  +  T+ S+I      
Sbjct: 243 EGMDD---NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVI------ 293

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                                        + C   GLLQ GK++H   L+       +  
Sbjct: 294 -----------------------------RACATAGLLQLGKQVHAYVLRREDFS-FHFD 323

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             L+ +Y K G    AR +F K   K L SWN ++ G+   G+  EA L+F E+ E    
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK--- 380

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMS------TDYNIIPTIEHYSC---------- 845
            + +++  +++    +G  EEG K F  M        DY     I+  SC          
Sbjct: 381 -NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK--SCAVLGAYCNGQ 437

Query: 846 --------------------MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
                               ++ +  K G ++EA    RTMP   D+  W AL+ +   H
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQH 496

Query: 886 GH 887
           GH
Sbjct: 497 GH 498



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 181/439 (41%), Gaps = 78/439 (17%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  QE LE+   +   G+         +++ C       LG +VHA +++R  DF  H  
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFD 323

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII--------------MVKLRNEK-- 376
            +L++ Y KC   + A  +F ++   +D + WN ++              + K   EK  
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382

Query: 377 --W-------------ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
             W             E  +KLF  M+    +         +++CA +GA+  G+Q H  
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           +LK   +S+LS  N LI+MY++   +E A +VF +M   +  SWN++I++    G+   A
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             ++ +M    I+PD IT                +LT+L      G    G      ++ 
Sbjct: 503 VDVYEEMLKKGIRPDRIT----------------LLTVLTACSHAGLVDQGRKYFDSMET 546

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA- 600
           V              Y +  G D+       L+D+  ++    +A+ V +++  +     
Sbjct: 547 V--------------YRIPPGADH----YARLIDLLCRSGKFSDAESVIESLPFKPTAEI 588

Query: 601 WNSLISGYCFKG----LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           W +L+SG    G      + A K+   + E +      ++  L + ++  GQ +E   + 
Sbjct: 589 WEALLSGCRVHGNMELGIIAADKLFGLIPEHD-----GTYMLLSNMHAATGQWEEVARVR 643

Query: 657 HHMKNSGIYPNVV-TWTSL 674
             M++ G+   V  +W  +
Sbjct: 644 KLMRDRGVKKEVACSWIEM 662


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/902 (30%), Positives = 462/902 (51%), Gaps = 79/902 (8%)

Query: 210  VKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
            VK  H++    G  ++S  +V +L+   Y + G   SA K F     +    W + +   
Sbjct: 179  VKQVHSRTFYYG--FDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 269  ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
               G E +E + ++ ++H   +     +L+ +L   TK+  F LG ++H  +IK GF  +
Sbjct: 237  SQNGLE-EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295

Query: 329  VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
             ++   L+  Y + R + SA ++FS ++   D + +N +I   ++    + A++LF +MQ
Sbjct: 296  TYVCNGLVALYSRSRKLISAERIFSTMNS-RDGVSYNSLISGLVQQGFSDRALELFTKMQ 354

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                K    T+  +L ACA VGA H+G Q+H + +K+ + +++ +   L+ +YS+   +E
Sbjct: 355  RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVE 414

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A + F   +  N+  WN M+          VA+   + ++ S                 
Sbjct: 415  TAHKFFLXTETENIVLWNVML----------VAYGQLDNLSDS----------------- 447

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                      + R MQ  G  PN  +   +L+  T L  L  G + H ++++ G   ++Y
Sbjct: 448  --------FEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVY 499

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            V + L+DMY K   L  A  +   +   ++V+W ++I+GY    +F  A ++  +ME   
Sbjct: 500  VCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRG 559

Query: 629  IKPDLVSW-----------------------------------NSLVSGYSIWGQSKEAL 653
            I+ D + +                                   N+L+S Y+  G+ +EA 
Sbjct: 560  IQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAY 619

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +    + +     N ++W SL+SG  Q+  + E+L+ F++M + + + N  T  S +   
Sbjct: 620  LAFEKIGD----KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAA 675

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              L  ++ G++IH + LK G+  +  V+  LI +Y+KSG++  A   F   + + + SWN
Sbjct: 676  ASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWN 735

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             MI G++ +G G EA+ LF E+   G  P+ +TF  +L+AC + GLV+EG  YF+SM   
Sbjct: 736  AMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKI 795

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            ++++P  EHY C+VDLLG+AG LD A ++I+ MP   DA IW  LL +C IH ++E  E 
Sbjct: 796  HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A+  L +LEP +SA Y L+ N+ A+S +W   +  R  M + GVK     SWI++   VH
Sbjct: 856  AAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVH 915

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             F A    HP T +IY  + HL     ++GYV D+  +  + ++ +K  +   H+EKLAI
Sbjct: 916  AFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAI 975

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +GL+   +  PIRV+KN RVC+DCH   KY+S +  R I +RD  RFHHF  G CSC D
Sbjct: 976  AFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKD 1035

Query: 1074 CW 1075
             W
Sbjct: 1036 FW 1037



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 179/733 (24%), Positives = 322/733 (43%), Gaps = 91/733 (12%)

Query: 190 CISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKA 249
           C++SG  F  ET +  C  S      + +          ++ SL+ +Y   GD   A K 
Sbjct: 68  CLTSGSLF--ETMRLHCRISKSGFDGEPL----------LIDSLVDNYFRHGDQHGAVKV 115

Query: 250 FFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT-KLM 308
           F    +RS   W+  +  + +     Q +  ++  +  +G+         +LK C    +
Sbjct: 116 FDENSNRSVFSWNKMIHVFVAQKSNFQ-VFCLFRRMLAEGITPNGYTFAGVLKACVGGDI 174

Query: 309 AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
           AF    +VH+     GFD    +   L++ Y K   +ESA K+F+ +  ++D + W  +I
Sbjct: 175 AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC-MKDIVTWVAMI 233

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
               +N   E AI LF +M  S        +  +L A  K+  F  G+Q+H  V+K    
Sbjct: 234 SGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFH 293

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           S   VCN L+++YSR+ KL  A R+F +M   +  S+NS+IS     G+ D A  LF KM
Sbjct: 294 SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM 353

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
               ++PD IT                                   V+ +L A   +  L
Sbjct: 354 QRDCLKPDCIT-----------------------------------VASLLSACASVGAL 378

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
             G + H + ++ G+  D+ +  SL+D+Y K   ++ A + F   +  NIV WN ++  Y
Sbjct: 379 HKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAY 438

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNS------------------------------ 638
                  ++ ++  QM+ E + P+  ++ S                              
Sbjct: 439 GQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV 498

Query: 639 -----LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
                L+  Y+ +GQ   AL I+  +       +VV+WT++I+G +Q++ + E+L+ F +
Sbjct: 499 YVCSVLIDMYAKYGQLALALRILRRLPED----DVVSWTAMIAGYVQHDMFSEALQLFEE 554

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M+   I+ ++   +S +  C G+  L+ G++IH      GF  D  +   LI +Y++ G 
Sbjct: 555 MEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGR 614

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           ++ A   F K  +K   SWN ++ G A  G  +EA+ +F  +L T  + +  T+ + ++A
Sbjct: 615 IQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISA 674

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
             +   +++G +   SM          E  + ++ L  K+G + +AW     M  + +  
Sbjct: 675 AASLANIKQG-QQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVI 732

Query: 874 IWGALLGSCRIHG 886
            W A++     HG
Sbjct: 733 SWNAMITGYSQHG 745



 Score =  209 bits (531), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 167/639 (26%), Positives = 288/639 (45%), Gaps = 76/639 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C    + +  + +H  + K GFD +  L  +L++ Y +  D   A K+F E S+  
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSN-R 122

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEGK 416
               WN++I V +  +       LFR M          T   +L+AC  VG   AF+  K
Sbjct: 123 SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC--VGGDIAFNYVK 180

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+H        +S+  V N LI +YS+N  +E A +VF+ +   ++ +W +MIS  +  G
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNG 240

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  LF  M++S I P                                       +S
Sbjct: 241 LEEEAILLFCDMHASEIFPTPYV-----------------------------------LS 265

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL A T+++L + G + H  +++ G   + YV   L+ +Y ++  L +A+ +F  M +R
Sbjct: 266 SVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSR 325

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           + V++NSLISG   +G    A ++  +M+ + +KPD ++  SL+S  +  G   + + + 
Sbjct: 326 DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLH 385

Query: 657 HHMKNSGIYP-------------------------------NVVTWTSLISGSLQNENYR 685
            H   +G+                                 N+V W  ++    Q +N  
Sbjct: 386 SHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLS 445

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           +S + F QMQ E + PN  T  S+L+TC  LG L  G++IH   +K GF  + YV + LI
Sbjct: 446 DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLI 505

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
           DMY+K G L  A  + R+     + SW  MI G+  +    EA+ LF E+   G Q D I
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNI 565

Query: 806 TFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            F + ++AC     + +G + +  S +  +    +I   + ++ L  + G + EA+    
Sbjct: 566 GFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN--NALISLYARCGRIQEAYLAFE 623

Query: 865 TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +  K + + W +L+      G+ E A     R+ + E 
Sbjct: 624 KIGDKNNIS-WNSLVSGLAQSGYFEEALQVFVRMLRTEA 661



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/533 (23%), Positives = 230/533 (43%), Gaps = 71/533 (13%)

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           I+L   M+    ++  +  + +L+ C   G+  E  ++H  + KS  +    + + L+  
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y R+     A +VFD   + ++ SWN MI  +                  S  Q      
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVA--------------QKSNFQ------ 142

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL-LKYGRESHGYIL 559
                          V  L R M + G  PNG + + VL+A     +   Y ++ H    
Sbjct: 143 ---------------VFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTF 187

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
             G D    V   L+D+Y KN  +++A++VF+ +  ++IV W ++ISG    GL   A  
Sbjct: 188 YYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAIL 247

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYS----------------IWGQSKE-----ALVIIHH 658
           +   M   EI P     +S++S  +                 WG   E      LV ++ 
Sbjct: 248 LFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYS 307

Query: 659 MKNSGIYP----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                I            + V++ SLISG +Q      +L+ F +MQ++ +KP+  T++S
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVAS 367

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           LL  C  +G L  G ++H   +K G   D  +   L+D+YSK  ++++A + F  +  + 
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETEN 427

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YF 827
           +  WN M++ +    N  ++  +F ++   G  P+  T+ ++L  C + G +  G + + 
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHT 487

Query: 828 DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
             + T + +   +   S ++D+  K G L  A   +R +P + D   W A++ 
Sbjct: 488 HVIKTGFQL--NVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIA 537



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 1/198 (0%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M++  ++ N      LL+ C   G L     +HC   K+GF  +  +   L+D Y + G+
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
              A +VF +++N+++ SWN MI  F    +  +   LF  +L  G  P+  TF  +L A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
           C    +     K   S +  Y    +    + ++DL  K GY++ A      +  K D  
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK-DIV 227

Query: 874 IWGALLGSCRIHGHLEYA 891
            W A++     +G  E A
Sbjct: 228 TWVAMISGLSQNGLEEEA 245


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/645 (38%), Positives = 360/645 (55%), Gaps = 28/645 (4%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N +IS ++ +  + LA   FD   + +  SWN M+++Y   G V+ A  LFN    SR +
Sbjct: 135  NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTE 190

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D I+WN L+SG+   G       L   M      P    VS        + +  Y R  
Sbjct: 191  WDAISWNALMSGYVQWGKMSEARELFDRM------PGRDVVS------WNIMVSGYARRG 238

Query: 555  HGYILRNGLD----YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
                 R   D     D++  T+++  Y +N  L+ A+ VFD M  RN V+WN++++ Y  
Sbjct: 239  DMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ 298

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
            + +   AK++ N M    +     SWN++++GY+  G  +EA  +   M       + V+
Sbjct: 299  RRMMDEAKELFNMMPCRNV----ASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVS 350

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W ++++   Q     E+L+ FI+M +     N +  + +L TC  +  L+ G ++H   +
Sbjct: 351  WAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI 410

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            + G+    +V   L+ MY K GN++ AR  F +   + + SWN MI G+A +G GKEA+ 
Sbjct: 411  RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 470

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            +F  +  T  +PD IT   +LAAC +SGLVE+G  YF SM  D+ +    EHY+CM+DLL
Sbjct: 471  IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 530

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG L EA D ++ MPF+PD+T+WGALLG+ RIH + E    A+ ++F+LEP N+  Y 
Sbjct: 531  GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 590

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A S +W D  ++R  M+E GVK V  +SWI++   VH FSA    HP   +IY 
Sbjct: 591  LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYA 650

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L   MKK GYV  T  V  D++EEEK  +L  H+EKLA+ YG++      PIRVIK
Sbjct: 651  FLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIK 710

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH A KY+S + GR I LRD  RFHHFR G CSC D W
Sbjct: 711  NLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 196/431 (45%), Gaps = 24/431 (5%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           ALM+ Y +   +  A +LF  +    D + WN ++    R      A +LF         
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPG-RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T   ++   A+ G   E ++    V  +  E N    N +++ Y +   ++ A  +
Sbjct: 257 ----TWTAVVSGYAQNGMLEEARR----VFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F+ M   N++SWN+M++ Y   G ++ A ++F+ M     Q D ++W  +L+ +   G  
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP----QKDAVSWAAMLAAYSQGGCS 364

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
           +  L L   M   G   N S+ + VL    ++  L+ G + HG ++R G     +VG +L
Sbjct: 365 EETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           + MY K   +++A+  F+ M+ R++V+WN++I+GY   G    A ++ + M     KPD 
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 484

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           ++   +++  S  G  ++ +   + M +  G+      +T +I    +     E+     
Sbjct: 485 ITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL-- 542

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF---IKDAYVATGLIDMYS 749
            M+    +P+ST   +LL    G   +    E+     +  F    ++A +   L ++Y+
Sbjct: 543 -MKDMPFEPDSTMWGALL----GASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYA 597

Query: 750 KSGNLKSAREV 760
            SG  + AR++
Sbjct: 598 SSGKWRDARKM 608



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 14/248 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + G    A   F     +    W++ L  Y S GG  +E L+++ E+   G  
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY-SQGGCSEETLQLFIEMGRCGEW 380

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L  C  + A   G+++H  LI+ G+     +  AL+  Y KC ++E A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+ +  D + WN +I    R+   + A+++F  M+ +S K    T+V +L AC+  G 
Sbjct: 441 FEEMEE-RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499

Query: 412 FHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +G        H + + +  E       C+I +  R  +L  A    D MKD      +
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEH----YTCMIDLLGRAGRLAEA---HDLMKDMPFEPDS 552

Query: 467 SMISSYTG 474
           +M  +  G
Sbjct: 553 TMWGALLG 560


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/823 (31%), Positives = 425/823 (51%), Gaps = 80/823 (9%)

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            R+   W++ +  Y   G   + L+  W  ++ +G+         +L  C+ L     G E
Sbjct: 73   RNVVSWNAMIAAYAQNGHSTEALVLYW-RMNLQGLGTDHVTFVSVLGACSSLAQ---GRE 128

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +H  +   G D    L  AL+  Y +   V  A ++F  +    D+  WN +I+   ++ 
Sbjct: 129  IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ-TRDETSWNAVILAHSQSG 187

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             W  A+++F+EM+    K  S T + ++   +      EG++IH  ++ +  +++L V  
Sbjct: 188  DWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVAT 246

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             LI+MY +      A  VFD MK                                   + 
Sbjct: 247  ALINMYGKCGSSHEAREVFDKMK-----------------------------------KR 271

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D+++WN ++  +  +G +   L L + +   GF+   ++   +L A + ++ L  GR  H
Sbjct: 272  DMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVH 331

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
             +IL  GLD ++ V T+L++MY K   L+ A++VF+ MKNR                   
Sbjct: 332  SHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR------------------- 372

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                            D V+W++L+  Y+  G  K+A          G   + ++W ++I
Sbjct: 373  ----------------DAVAWSTLIGAYASNGYGKDARKARKVFDRLG-SRDTISWNAMI 415

Query: 676  SGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            +  +QN     ++K F +M     +KP++ T  ++L+ C  LG L   K +H    ++  
Sbjct: 416  TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL 475

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              +  V   LI+MY++ G+L+ A  +F  +  KT+ SW  M+  F+ YG   EA+ LF E
Sbjct: 476  ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQE 535

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +   G +PD +T+T++L  C + G +E+GW+YF  M+  + + PT +H++ MVDLLG++G
Sbjct: 536  MDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSG 595

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             L +A + + +MPF+PD   W   L +CRIHG LE  E A+ R+++L+P ++A Y  M N
Sbjct: 596  RLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSN 655

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A    WE V  +R  M+E G+K +   S+I++D  +H FS+ G  HP T EI  EL  
Sbjct: 656  IYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTR 715

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTR 1033
            L   M+  GYVPDT+ V  D+ E EK  +LL H+EK+AI +GL+ ++ S  PIRV+KN R
Sbjct: 716  LHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLR 775

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHF-REGECSCNDCW 1075
            VCSDCHTA K+++ + GR+I +RD  RFH F  +G+CSC D W
Sbjct: 776  VCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 214/416 (51%), Gaps = 11/416 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  +L+  Y  FG    A + F    +R    W++ +  + S  G+    L ++ E+   
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH-SQSGDWSGALRIFKEMKCD 202

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
                +  + +I    T  +    G ++HA ++  GFD D+ +  AL+N YGKC     A
Sbjct: 203 VKPNSTTYINVISGFSTPEV-LPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEA 261

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            ++F ++    D + WN +I   + N  +  A++L++++     K    T V +L AC+ 
Sbjct: 262 REVFDKMKK-RDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSS 320

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           V A  +G+ +H ++L+  L+S ++V   L++MY++   LE A +VF++MK+ +  +W+++
Sbjct: 321 VKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTL 380

Query: 469 ISSYTGLGY---VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ- 524
           I +Y   GY      A  +F+++ S     D I+WN +++ +  +G     + + R M  
Sbjct: 381 IGAYASNGYGKDARKARKVFDRLGSR----DTISWNAMITTYVQNGCAVAAMKIFREMTG 436

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
           + G +P+  +   VL+A   L  L   +  H  I  + L+ ++ V  +L++MY +   L+
Sbjct: 437 AAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE 496

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
            A+ +F   K + +V+W ++++ +   G +  A  +  +M+ E +KPD V++ S++
Sbjct: 497 EAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSIL 552



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 202/416 (48%), Gaps = 33/416 (7%)

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           +P+  +   VL + +    +  GR  H  I  +  + D  VG +L+ MY K D L +A+ 
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 589 VFDNM--KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           VF++M  + RN+V+WN++I+ Y   G    A  +  +M  + +  D V++ S++   S  
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 647 GQSKE------------------ALVIIH----------HMKNSGIYPNVVTWTSLISGS 678
            Q +E                  ALV ++           M  S    +  +W ++I   
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH 183

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            Q+ ++  +L+ F +M+  D+KPNSTT  +++       +L  G++IH   + NGF  D 
Sbjct: 184 SQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDL 242

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            VAT LI+MY K G+   AREVF K   + + SWN MI  + + G+  EA+ L+ +L   
Sbjct: 243 VVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDME 302

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
           GF+    TF ++L AC +   + +G +   S   +  +   +   + +V++  K G L+E
Sbjct: 303 GFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGSLEE 361

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
           A      M  + DA  W  L+G+   +G+ + A  A +   +L   ++ ++N M+ 
Sbjct: 362 ARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMIT 416



 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 191/470 (40%), Gaps = 106/470 (22%)

Query: 214 HAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA+++  G  +++D +V + LI  Y + G    A + F     R    W+  +  Y    
Sbjct: 230 HAEIVANG--FDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY-VLN 286

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+  E LE++ +L  +G          IL  C+ + A   G  VH+ +++RG D +V + 
Sbjct: 287 GDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVA 346

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLE--------------------------------- 359
            AL+N Y KC  +E A K+F+ + + +                                 
Sbjct: 347 TALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR 406

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFHEGKQI 418
           D + WN +I   ++N     A+K+FREM  ++  K  + T + +L+ACA +G   E K +
Sbjct: 407 DTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKAL 466

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H  + +S LESN+ V N LI+MY+R   LE A R+F + K+                   
Sbjct: 467 HAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKT----------------- 509

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                             +++W  +++    +G Y   L L + M   G +P+  + + +
Sbjct: 510 ------------------VVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSI 551

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           L   T           HG  L  G  Y     T + +++       +   + D +     
Sbjct: 552 LFVCT-----------HGGSLEQGWRY----FTDMAELHALAPTADHFAAMVDLLGR--- 593

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
                        G   +AK++L  M  E   PD V+W + ++   I G+
Sbjct: 594 ------------SGRLFDAKELLESMPFE---PDPVAWMTFLTACRIHGK 628


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Cucumis sativus]
          Length = 855

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/793 (32%), Positives = 412/793 (51%), Gaps = 113/793 (14%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN +I   ++    ++ +  + +MQ         T   +L+AC ++ +   G  +H  V 
Sbjct: 95   WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             + L SN+ +CN +++MY R                                G +D A  
Sbjct: 155  ANGLGSNVFICNSIVAMYGR-------------------------------CGALDDAHQ 183

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ---SLGFRPNGSSVSVVLQ 540
            +F+++   +I+ DI++WN +L+ +   G  +  L +   M    SL  RP+  ++  +L 
Sbjct: 184  MFDEVLERKIE-DIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILP 242

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
            A   +  L++G++ HG+ +RNGL  D++VG +L+ MY K   +  A +VF+ +K +++V+
Sbjct: 243  ACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVS 302

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEEEI------------------------------- 629
            WN++++GY   G F +A  +   M+EE+I                               
Sbjct: 303  WNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQ 362

Query: 630  ----KPDLVSWNSLVSG---------------YSI-------WGQSKEALVIIHHMKN-- 661
                +P++V+  SL+SG               Y I       W   ++ L++++ + +  
Sbjct: 363  LYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMY 422

Query: 662  ----------------SGIYPNVVTWTSLISGSLQNENYRESLKFFIQM--QQEDIKPNS 703
                             G   NVVTWT +I G  Q+    ++LK F Q+  Q+  +KPN+
Sbjct: 423  AKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNA 482

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA-YVATGLIDMYSKSGNLKSAREVFR 762
             T+S  L  C  LG L+ G+++H   L+N    +  YV   LIDMYSKSG++ +AR VF 
Sbjct: 483  FTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFD 542

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
                + + SW  ++ G+ ++G G+EA+ LF ++ + GF  D ITF  +L AC +SG+V++
Sbjct: 543  NMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQ 602

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G  YF  M   + I P  EHY+CMVDLLG+AG L+EA + I+ M  +P A +W ALL + 
Sbjct: 603  GMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSAS 662

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIH ++E  E A+ +L +L   N  +Y L+ NL A + RW+DV R+R  M   G++    
Sbjct: 663  RIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPG 722

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             SWIQ  +    F      HP + +IY  L  L+  +K +GYVP T     D+D+EEKG 
Sbjct: 723  CSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGD 782

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            +L  H+EKLA+ YG++ T    PIR+ KN R+C DCH+A  Y+S++   EI LRD +RFH
Sbjct: 783  LLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFH 842

Query: 1063 HFREGECSCNDCW 1075
            HF++G CSC   W
Sbjct: 843  HFKKGSCSCRSYW 855



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 269/559 (48%), Gaps = 58/559 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD-- 357
           +LK C ++ +   G  VHA +   G   +V +  +++  YG+C  ++ A+++F EV +  
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK 192

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKL-FREMQFSSAK--AISRTIVKMLQACAKVGAFHE 414
           +ED + WN I+   ++  +   A+++ FR     S K    + T+V +L ACA V A   
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQH 252

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           GKQ+HG+ +++ L  ++ V N L+SMY++ +K+  A +VF+ +K  ++ SWN+M++ Y+ 
Sbjct: 253 GKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQ 312

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
           +G  D A SLF  M    I+ D+ITW+ +++G+   G     L + R MQ  G  PN  +
Sbjct: 313 IGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVT 372

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDY-------DLYVGTSLMDMYVKNDCLQNAQ 587
           ++ +L     +  L YG+++H Y+++N L+        DL V   L+DMY K    + A+
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432

Query: 588 EVFDNM--KNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEIKPD----------- 632
            +FD++  K++N+V W  +I GY   G   +A K+  Q+  ++  +KP+           
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492

Query: 633 -------------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                    L   N L+  YS  G    A  +  +MK      N
Sbjct: 493 ARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMK----LRN 548

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK-EIH 726
           VV+WTSL++G   +    E+L  F QMQ+     +  T   +L  C   G++  G    H
Sbjct: 549 VVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFH 608

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNG 785
            +    G    A     ++D+  ++G L  A E+ +  S   T   W  ++    I+ N 
Sbjct: 609 DMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANI 668

Query: 786 KEAILLFHELLETGFQPDA 804
           +       +L E G + D 
Sbjct: 669 ELGEYAASKLTELGAENDG 687


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 286/921 (31%), Positives = 456/921 (49%), Gaps = 87/921 (9%)

Query: 196  CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
            C L   +    L+  +  H  + K+G +  +  +  +LI  Y   G    AA+ F     
Sbjct: 209  CVLKCVSSLGSLTEGEVIHGLLEKLG-LGQACAVANALIAVYSRCGRMEDAARVFDSMHP 267

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            R    W+S +    S G      ++++ ++  +G    S  +  +L  C  L    +G  
Sbjct: 268  RDAISWNSMIGGCFSNGWH-GTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKA 326

Query: 316  VHASLIKRGFDF----------DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
            VH   +K G  +          D  L   L+  Y KC D+ SA ++F  +S   +  +WN
Sbjct: 327  VHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWN 386

Query: 366  EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
             I+    +  ++E ++ LF +M           I  +L+    +    +G   HGY++K 
Sbjct: 387  LIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKL 446

Query: 426  ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
               +  +VCN LIS Y+++N +  A  VF+ M   +  SWNS+IS  +            
Sbjct: 447  GFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSS----------- 495

Query: 486  NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
            N +NS  I+  I  W        T G   + +TLL                 VL A  + 
Sbjct: 496  NGLNSEAIELFIRMW--------TQGQELDSVTLLS----------------VLPACAQS 531

Query: 546  RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
            R    GR  HGY ++ GL  +  +  +L+DMY      Q+  ++F +M  +N+V+W ++I
Sbjct: 532  RYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMI 591

Query: 606  SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------VSGYSIW-GQS 649
            + Y   GLF     +L +M  + I+PD+ +  S                V GY+I  G  
Sbjct: 592  TSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGME 651

Query: 650  K-------------------EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
            K                   EA +I   + N     +V++W +LI G  +N    ES   
Sbjct: 652  KLLPVANALMEMYVKCRNVEEARLIFDRVTNK----DVISWNTLIGGYSRNNFPNESFSL 707

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F  M  +  +PN+ TM+ +L     +  L+ G+EIH   L+ GF++D+Y +  L+DMY K
Sbjct: 708  FSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVK 766

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             G L  AR +F +   K L SW  MI G+ ++G GK AI LF ++  +G +PDA +F+A+
Sbjct: 767  CGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAI 826

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L AC +SGL  EG ++F +M  +Y I P ++HY+C+VDLL + G L EA +FI +MP +P
Sbjct: 827  LYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEP 886

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            D++IW +LL  CRIH +++ AE  + ++FKLEP N+  Y L+ N+ A + RWE V++L++
Sbjct: 887  DSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKN 946

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
             +   G++    +SWI++   VHVF A+   HP    I   L  +   M++ G+ P  + 
Sbjct: 947  KIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKY 1006

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
                 D+    + L  H+ KLA+ +G++      PIRV KN++VCS CH AAK++S +  
Sbjct: 1007 ALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCN 1066

Query: 1051 REIFLRDGARFHHFREGECSC 1071
            REI LRD +RFH F  G CSC
Sbjct: 1067 REIILRDSSRFHRFEGGRCSC 1087



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 289/627 (46%), Gaps = 62/627 (9%)

Query: 231 KSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHG 287
           K L+  YL+ GD    A+  F       AD   W+S +  Y    G+ QE + ++ ++  
Sbjct: 140 KRLVLAYLKCGDL-GEARTVFDGMPPQAADVRVWTSLMSAYAK-AGDFQEAVSLFRQMQC 197

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
            GV   +  ++ +LK  + L +   G  +H  L K G      +  AL+  Y +C  +E 
Sbjct: 198 CGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMED 257

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A ++F  +    D + WN +I     N     A+ LF +M     +  S T++ +L ACA
Sbjct: 258 AARVFDSMHP-RDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACA 316

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +G    GK +HGY +KS L   L                     V   + D  L S   
Sbjct: 317 GLGYGLIGKAVHGYSVKSGLLWGLD-------------------SVQSGIDDAALGS--K 355

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           ++  Y   G +  A  +F+ M+S   + ++  WN ++ G+   G ++  L+L   M  LG
Sbjct: 356 LVFMYVKCGDMASARRVFDAMSS---KGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELG 412

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             P+  ++S +L+ +T L   + G  +HGYI++ G      V  +L+  Y K++ + +A 
Sbjct: 413 IAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAV 472

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------ 635
            VF+ M  ++ ++WNS+ISG    GL   A ++  +M  +  + D V+            
Sbjct: 473 LVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSR 532

Query: 636 -W--NSLVSGYSI----WGQSKEALVIIHHMKNSGIY------------PNVVTWTSLIS 676
            W    +V GYS+     G++  A  ++    N   +             NVV+WT++I+
Sbjct: 533 YWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMIT 592

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
             ++   + +      +M  + I+P+   ++S L    G   L+ GK +H   ++NG  K
Sbjct: 593 SYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEK 652

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
              VA  L++MY K  N++ AR +F +  NK + SWN +I G++      E+  LF ++L
Sbjct: 653 LLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML 712

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEG 823
              F+P+A+T T +L A  +   +E G
Sbjct: 713 -LQFRPNAVTMTCILPAAASISSLERG 738


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/711 (35%), Positives = 378/711 (53%), Gaps = 74/711 (10%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            V++L+ C K       KQ+H  ++KS +E N  V N L+ +Y    +L+ A  VFD++  
Sbjct: 32   VEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDAL-- 89

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
                                             ++    +WN +++G+  H   ++ + L
Sbjct: 90   ---------------------------------VKKSGASWNAMIAGYVEHKHAEDAMRL 116

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             R M   G +PN  +  ++L+A   L  LK+G+E H  I   GL+ D+ VGT+L+ MY K
Sbjct: 117  FREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGK 176

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--- 636
               +  A+ +FDN+ N +I++W  +I  Y   G    A +++ QME+E  KP+ +++   
Sbjct: 177  CGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSI 236

Query: 637  --------------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGI 664
                                             +LV  Y+  G   +A V+   MK    
Sbjct: 237  LNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMK---- 292

Query: 665  YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
              +VV+W  +I    ++    E+   F+QMQ E  KP++    S+L  C   G L+  K+
Sbjct: 293  VRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKK 352

Query: 725  IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            IH   L +G   D  V T L+ MYSKSG++  AR VF +   + + SWN MI G A +G 
Sbjct: 353  IHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGL 412

Query: 785  GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
            G++A+ +F  +   G +PD +TF A+L+AC ++GLV+EG   + +M+  Y I P + H +
Sbjct: 413  GQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCN 472

Query: 845  CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
            CMVDLLG+AG L EA  FI  M   PD   WGALLGSCR +G++E  E+ ++   KL+P 
Sbjct: 473  CMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPK 532

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            N+A Y L+ N+ A + +W+ V  +R  M E G++     SWI++D  +H F    + HP 
Sbjct: 533  NAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPE 592

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
              EI      ++ ++K  GY+PDTR V ++ + ++K   + SH+EKLAIVYGLM T    
Sbjct: 593  CKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGN 652

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            PIRV KN RVC+DCH A K +S V GREI +RD  RFHHF++G CSC D W
Sbjct: 653  PIRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 267/581 (45%), Gaps = 53/581 (9%)

Query: 181 TLAKQAQLSCISSGFCF---LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHY 237
            L  + Q   I+  F +   L    K + L + K  H  +IK  ++  +  ++ +L+  Y
Sbjct: 15  VLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIK-SRMEQNAHVMNNLLHVY 73

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           +E G    A   F     +S A W++ +  Y       ++ + ++ E+  +GV   +   
Sbjct: 74  IECGRLQEARCVFDALVKKSGASWNAMIAGYVEHK-HAEDAMRLFREMCHEGVQPNAGTY 132

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            IILK C  L A   G EVHA +   G + DV +  AL+  YGKC  +  A ++F  + +
Sbjct: 133 MIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMN 192

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
             D + W  +I    ++   + A +L  +M+    K  + T V +L ACA  GA    K+
Sbjct: 193 -HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKR 251

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +H + L + LE ++ V   L+ MY+++  ++ A  VFD MK  ++ SWN MI ++   G 
Sbjct: 252 VHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGR 311

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
              A+ LF +M +   +PD I +                L++L    S G          
Sbjct: 312 GHEAYDLFLQMQTEGCKPDAIMF----------------LSILNACASAG---------- 345

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
                     L++ ++ H + L +GL+ D+ VGT+L+ MY K+  + +A+ VFD MK RN
Sbjct: 346 ---------ALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRN 396

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           +V+WN++ISG    GL  +A ++  +M    +KPD V++ +++S  S  G   E      
Sbjct: 397 VVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYL 456

Query: 658 HMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            M    GI P+V     ++    +     E+  F   M    + P+  T  +LL +C   
Sbjct: 457 AMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMA---VDPDEATWGALLGSCRTY 513

Query: 717 GLLQNG----KEIHCLCLKNG----FIKDAYVATGLIDMYS 749
           G ++ G    KE   L  KN      + + Y   G  DM S
Sbjct: 514 GNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVS 554



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 245/547 (44%), Gaps = 77/547 (14%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +G+I  S +   +LK C K        +VH  +IK   + + H+   L++ Y +C  ++ 
Sbjct: 22  RGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQE 81

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  +F  +   +    WN +I   + ++  E+A++LFREM     +  + T + +L+ACA
Sbjct: 82  ARCVFDALVK-KSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACA 140

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            + A   GK++H  +    LES++ V   L+ MY +   +  A R+FD++ +H++ SW  
Sbjct: 141 SLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTV 200

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           MI +Y   G    A+ L  +M     +P+ IT+  +L+   + G+               
Sbjct: 201 MIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGA--------------- 245

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
                               LK+ +  H + L  GL+ D+ VGT+L+ MY K+  + +A+
Sbjct: 246 --------------------LKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDAR 285

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV------------- 634
            VFD MK R++V+WN +I  +   G    A  +  QM+ E  KPD +             
Sbjct: 286 VVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAG 345

Query: 635 --SW--------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
              W                     +LV  YS  G   +A V+   MK      NVV+W 
Sbjct: 346 ALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMK----VRNVVSWN 401

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH-CLCLK 731
           ++ISG  Q+   +++L+ F +M    +KP+  T  ++L  C   GL+  G+  +  +   
Sbjct: 402 AMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQV 461

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAIL 790
            G   D      ++D+  ++G L  A+      A +   A+W  ++     YGN +   L
Sbjct: 462 YGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGEL 521

Query: 791 LFHELLE 797
           +  E L+
Sbjct: 522 VAKERLK 528



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 145/341 (42%), Gaps = 58/341 (17%)

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           E++   +   Q  +  +S     +L+ C     L   K++H   +K+   ++A+V   L+
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            +Y + G L+ AR VF     K+ ASWN MI G+  + + ++A+ LF E+   G QP+A 
Sbjct: 71  HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130

Query: 806 TFTALLAACKN-----------------------------------SGLVEEGWKYFDSM 830
           T+  +L AC +                                    G + E  + FD++
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190

Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGALLGSCRIHGH 887
             +++II     ++ M+    ++G   EA+  +  M    FKP+A  + ++L +C   G 
Sbjct: 191 -MNHDIIS----WTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGA 245

Query: 888 LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
           L++ +   R    L+     +  +   L+ M  +   ++  R   D + V+ V+ W    
Sbjct: 246 LKWVKRVHR--HALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSW---- 299

Query: 948 IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            + ++  F+  G  H        E Y L  +M+  G  PD 
Sbjct: 300 -NVMIGAFAEHGRGH--------EAYDLFLQMQTEGCKPDA 331


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Cucumis sativus]
          Length = 776

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/738 (34%), Positives = 407/738 (55%), Gaps = 37/738 (5%)

Query: 340  GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
            G+C   ESA  +F+ +      + +N +I   L N K++ A K+F +M       IS  +
Sbjct: 74   GQC---ESALSVFNGMRR-RSTVTYNAMISGYLSNNKFDCARKVFEKM--PDRDLISWNV 127

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
              ML    K G     + +         E ++   N ++S +++N  +E A ++FD M  
Sbjct: 128  --MLSGYVKNGNLSAARAL----FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLV 181

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             N  SWN ++S+Y   G ++ A  LF+    S++  +I++WNCL+ G+       +  +L
Sbjct: 182  KNEISWNGLLSAYVQNGRIEDARRLFD----SKMDWEIVSWNCLMGGYVRKKRLDDARSL 237

Query: 520  LRGMQSLGFRPNGSSVS--VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
               M      P    +S  +++    +  LL   R     +       D++  T+++  +
Sbjct: 238  FDRM------PVRDKISWNIMITGYAQNGLLSEARR----LFEELPIRDVFAWTAMVSGF 287

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            V+N  L  A  +F+ M  +N V+WN++I+GY        A+++ +QM       +  SWN
Sbjct: 288  VQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR----NTSSWN 343

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            ++V+GY+  G   +A ++   M       + ++W ++ISG  Q+    E+L  FI+M+++
Sbjct: 344  TMVTGYAQCGNIDQAKILFDEMPQR----DCISWAAMISGYAQSGQSEEALHLFIKMKRD 399

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
                N + ++  L +C  +  L+ GK++H   +K GF         L+ MY K G+++ A
Sbjct: 400  GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEA 459

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             +VF     K + SWN MI G+A +G GKEA+ LF E ++   +PD +T   +L+AC ++
Sbjct: 460  FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHT 518

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            G V++G +YF+SM  +Y I    +HY+CM+DLLG+AG LDEA + +++MPF PDA  WGA
Sbjct: 519  GFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGA 578

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+ RIHG  E  E A+ ++F++EP NS  Y L+ NL A S RW +V  +R  M + GV
Sbjct: 579  LLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGV 638

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            K V  +SW++I    H+F+     HP    IY  L  L  E+KK G+V  T+ V  D++E
Sbjct: 639  KKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEE 698

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            EEK  +L  H+EKLA+ +G++      PIRVIKN RVC DCH A K++S +  R+I +RD
Sbjct: 699  EEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRD 758

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFHHF EG CSC D W
Sbjct: 759  SNRFHHFSEGSCSCGDYW 776



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 136/563 (24%), Positives = 240/563 (42%), Gaps = 49/563 (8%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  YL    F  A K F     R    W+  L  Y    G +     ++ ++  K V+
Sbjct: 96  AMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVK-NGNLSAARALFNQMPEKDVV 154

Query: 292 -------------FRSRILTIILKLCTKLMAFWLG----------VEVHASLIKRGFDFD 328
                        F      I  ++  K    W G          +E    L     D++
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWE 214

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           +     LM  Y + + ++ A  LF  +  + D + WN +I    +N     A +LF E+ 
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEARRLFEELP 273

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                A +  +   +Q     G   E  +I     +   E N    N +I+ Y ++ ++E
Sbjct: 274 IRDVFAWTAMVSGFVQN----GMLDEATRI----FEEMPEKNEVSWNAMIAGYVQSQQIE 325

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A  +FD M   N SSWN+M++ Y   G +D A  LF++M     Q D I+W  ++SG+ 
Sbjct: 326 KARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMP----QRDCISWAAMISGYA 381

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             G  +  L L   M+  G   N S+++  L +  E+  L+ G++ HG +++ G      
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            G +L+ MY K   ++ A +VF+++  ++IV+WN++I+GY   G    A  +   M +  
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMT 500

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRES 687
           IKPD V+   ++S  S  G   + +   + M +N GI  N   +T +I    +     E+
Sbjct: 501 IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF---IKDAYVATGL 744
           L     M+     P++ T  +LL    G   +    E+     +  F     ++ +   L
Sbjct: 561 LNL---MKSMPFYPDAATWGALL----GASRIHGDTELGEKAAEKVFEMEPDNSGMYVLL 613

Query: 745 IDMYSKSGNLKSAREVFRKSANK 767
            ++Y+ SG  +  RE+  K  +K
Sbjct: 614 SNLYAASGRWREVREMRSKMRDK 636



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 170/376 (45%), Gaps = 51/376 (13%)

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
           +S+ +  DI+ WN  +S +   G  ++ L++  GM+           +V   A+    L 
Sbjct: 52  DSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS--------TVTYNAMISGYLS 103

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
               +    +     D DL     ++  YVKN  L  A+ +F+ M  +++V+WN+++SG+
Sbjct: 104 NNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
              G    A+K+ +QM    +  + +SWN L+S Y   G+ ++A      + +S +   +
Sbjct: 164 AQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA----RRLFDSKMDWEI 215

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HC 727
           V+W  L+ G ++ +   ++   F +M   D    +  ++   Q     GLL   + +   
Sbjct: 216 VSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN----GLLSEARRLFEE 271

Query: 728 LCLKNGF----IKDAYVATGLIDM----------------------YSKSGNLKSAREVF 761
           L +++ F    +   +V  G++D                       Y +S  ++ ARE+F
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            +  ++  +SWN M+ G+A  GN  +A +LF E+     Q D I++ A+++    SG  E
Sbjct: 332 DQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMP----QRDCISWAAMISGYAQSGQSE 387

Query: 822 EGWKYFDSMSTDYNII 837
           E    F  M  D  I+
Sbjct: 388 EALHLFIKMKRDGGIL 403



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 176/403 (43%), Gaps = 75/403 (18%)

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           +D D+      +  Y++    ++A  VF+ M+ R+ V +N++ISGY     F  A+K+  
Sbjct: 56  VDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFE 115

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
           +M +     DL+SWN ++SGY   G    A  + + M       +VV+W +++SG  QN 
Sbjct: 116 KMPDR----DLISWNVMLSGYVKNGNLSAARALFNQMPEK----DVVSWNAMLSGFAQNG 167

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              E+ K F QM                                        +K+     
Sbjct: 168 FVEEARKIFDQM---------------------------------------LVKNEISWN 188

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
           GL+  Y ++G ++ AR +F    +  + SWNC++ G+       +A  LF  +       
Sbjct: 189 GLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR---- 244

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D I++  ++     +GL+ E  + F+ +      I  +  ++ MV    + G LDEA   
Sbjct: 245 DKISWNIMITGYAQNGLLSEARRLFEELP-----IRDVFAWTAMVSGFVQNGMLDEATRI 299

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEI-ASRRLFKLEPC-NSANYNLMMNLLAMSN 920
              MP K + + W A+     I G+++  +I  +R LF   P  N++++N M+   A   
Sbjct: 300 FEEMPEKNEVS-WNAM-----IAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCG 353

Query: 921 RWEDVERLRHSMDEVGVKSVLVWSWI--------QIDQIVHVF 955
              ++++ +   DE+  +  + W+ +        Q ++ +H+F
Sbjct: 354 ---NIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLF 393



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 137/301 (45%), Gaps = 8/301 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + G+   A   F     R    W++ +  Y    G+ +E L ++ ++   G I
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQ-SGQSEEALHLFIKMKRDGGI 402

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L   L  C ++ A  LG ++H  L+K GF        AL+  YGKC  +E A  +
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F ++++ +D + WN +I    R+   + A+ LF  M+  + K    T+V +L AC+  G 
Sbjct: 463 FEDITE-KDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVGVLSACSHTGF 520

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH-NLSSWNSMI 469
             +G +    + ++  + +N     C+I +  R  +L+ A  +  SM  + + ++W +++
Sbjct: 521 VDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGF 528
            +    G  ++      K+    ++PD      LLS  +   G ++ V  +   M+  G 
Sbjct: 581 GASRIHGDTELGEKAAEKV--FEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGV 638

Query: 529 R 529
           +
Sbjct: 639 K 639


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 693

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/703 (35%), Positives = 404/703 (57%), Gaps = 16/703 (2%)

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS-V 433
            +K   AI L      +S    +R ++     CA+   F + K++  ++  +  +   S +
Sbjct: 5    QKLHQAIDLLYSHGLASFDDYTRLVLH----CARANDFIQAKRLQSHMELNLFQPKDSFI 60

Query: 434  CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
             N L+ +Y++  KL  A  VFD+M   ++ SWN+++S+Y  +G V+    +F++M     
Sbjct: 61   HNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR-- 118

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
              D +++N L++   ++G     L +L  MQ  GF+P   S    LQA ++L  L++G++
Sbjct: 119  --DSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQ 176

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             HG I+   L  + +V  ++ DMY K   +  A+ +FD M ++N+V+WN +ISGY   G 
Sbjct: 177  IHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGN 236

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                  + N+M+   +KPDLV+ +++++ Y   G+  +A  +   +       + + WT+
Sbjct: 237  PNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKK----DEICWTT 292

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I G  QN    ++   F  M + ++KP+S T+SS++ +C  L  L +G+ +H   +  G
Sbjct: 293  MIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMG 352

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
                  V++ L+DMY K G    AR +F     + + +WN MI+G+A  G   EA+ L+ 
Sbjct: 353  IDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYE 412

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
             + +  F+PD ITF  +L+AC N+ +V+EG KYFDS+S ++ I PT++HY+CM+ LLG++
Sbjct: 413  RMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSIS-EHGIAPTLDHYACMITLLGRS 471

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G +D+A D I+ MP +P+  IW  LL  C   G L+ AE+A+  LF+L+P N+  Y ++ 
Sbjct: 472  GSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIMLS 530

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            NL A   RW+DV  +R  M E   K    +SW+++   VH F +E   HP  G+IY EL 
Sbjct: 531  NLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELN 590

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM-KTKSRAPIRVIKNT 1032
             L+S ++++GY PDT  V  ++ EEEK + +  H+EKLA+ + L+ K    APIR+IKN 
Sbjct: 591  RLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNI 650

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCH   K+ S+   R I +RD  RFHHF  G+CSCND W
Sbjct: 651  RVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 200/427 (46%), Gaps = 36/427 (8%)

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           DV+    L++ Y K   VE+ + +F ++    D + +N +I     N     A+K+   M
Sbjct: 88  DVYSWNTLLSAYAKMGMVENLHVVFDQMP-YRDSVSYNTLIACFASNGHSGKALKVLVRM 146

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
           Q    +    + V  LQAC+++     GKQIHG ++ + L  N  V N +  MY++   +
Sbjct: 147 QEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDI 206

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT-------- 499
           + A  +FD M D N+ SWN MIS Y  +G  +    LFN+M  S ++PD++T        
Sbjct: 207 DKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAY 266

Query: 500 -----------------------WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                                  W  ++ G+  +G  ++   L   M     +P+  ++S
Sbjct: 267 FRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTIS 326

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            ++ +  +L  L +G+  HG ++  G+D  + V ++L+DMY K     +A+ +F+ M  R
Sbjct: 327 SMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR 386

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N++ WN++I GY   G  + A  +  +M++E  KPD +++  ++S        KE     
Sbjct: 387 NVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYF 446

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
             +   GI P +  +  +I+   ++ +  +++     M  E   PN    S+LL  C   
Sbjct: 447 DSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHE---PNYRIWSTLLSVCAK- 502

Query: 717 GLLQNGK 723
           G L+N +
Sbjct: 503 GDLKNAE 509



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 109/242 (45%), Gaps = 3/242 (1%)

Query: 230 VKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
           V +++  Y   G    A   F     +    W++ +  Y   G E ++   ++G++  + 
Sbjct: 259 VSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGRE-EDAWMLFGDMLRRN 317

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
           V   S  ++ ++  C KL + + G  VH  ++  G D  + +  AL++ Y KC     A 
Sbjct: 318 VKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDAR 377

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            +F E   + + + WN +I+   +N +   A+ L+  MQ  + K  + T V +L AC   
Sbjct: 378 VIF-ETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINA 436

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
               EG++    + +  +   L    C+I++  R+  ++ A  +   M  + N   W+++
Sbjct: 437 DMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTL 496

Query: 469 IS 470
           +S
Sbjct: 497 LS 498


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 265/781 (33%), Positives = 420/781 (53%), Gaps = 47/781 (6%)

Query: 336  MNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            +N Y KC+    A KL  + S  E DL+ W+ +I   ++N + E A+  + EM    AK 
Sbjct: 89   VNLYSKCQCFRVARKLVIDSS--EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKG 146

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL--------ESNLS-VCNCLISMYSRNN 445
               T   +L+ C+       GKQIH   L + +        E +LS V N    +   N 
Sbjct: 147  NEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENY 206

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
             +++   +     D +  S N+++  Y   G  + A ++F ++     +PDI++WN +++
Sbjct: 207  GMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP----KPDIVSWNAVIA 262

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            G   H      L LL  M S    P+  ++S  L+A   + L+K GR+ H  +++  ++ 
Sbjct: 263  GCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEP 322

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            D +VG  L+DMY K   LQ+A+ VFD M  ++++ WNS+ISGY   G  + A  +   M 
Sbjct: 323  DSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMY 382

Query: 626  EEEIKPDLVSWNSLV---------------------SGYSIWGQSKEALV--------II 656
            +E ++ +  + ++++                     SGY   G    +L+        + 
Sbjct: 383  KEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLE 442

Query: 657  HHMKNSGIYP--NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
               K   + P  ++V +TS+I+   Q     E+LK +++MQ  DIKP++   SSL   C 
Sbjct: 443  DAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACA 502

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             L   + GK+IH   LK G + D +    L++MY+K G++  A  +F + + + + SW+ 
Sbjct: 503  NLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSA 562

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MI G A +G+G++A+ LF+++L+ G  P+ IT  ++L+AC ++GLV E  ++F  M   +
Sbjct: 563  MIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLF 622

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             I PT EHY+CMVD+LG+ G LDEA   ++ MPF+  A +WGALLG+ RIH ++E    A
Sbjct: 623  GITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHA 682

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            +  L  LEP  S  + L+ N+ A +  W++V ++R SM    VK     SWI++   V+ 
Sbjct: 683  AEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYT 742

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP + EIY +L  L   +   GYVP       D+++ EK ++L  H+EKLA+ 
Sbjct: 743  FIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVA 802

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +GL+ T   APIRV KN RVC DCHTA K++S V  REI +RD  RFHHFR+G CSC D 
Sbjct: 803  FGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDY 862

Query: 1075 W 1075
            W
Sbjct: 863  W 863



 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 231/525 (44%), Gaps = 77/525 (14%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L+ +L  C  L     G++VH  LIK G+D D     AL++ Y K    E+A  +F E+ 
Sbjct: 191 LSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP 250

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
              D + WN +I   + +EK + A+KL  +M          T+   L+ACA +G    G+
Sbjct: 251 K-PDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGR 309

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+H  ++K  +E +  V   LI MYS+   L+ A  VFD M   ++  WNS+IS Y+  G
Sbjct: 310 QLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCG 369

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
           Y   A SLF  M    ++             F   +   +L    G Q+ GF     ++S
Sbjct: 370 YDIEAMSLFTNMYKEGLE-------------FNQTTLSTILKSTAGSQANGFCEQVHTIS 416

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
           +                      ++G  YD YV  SL+D Y K   L++A +VF+     
Sbjct: 417 I----------------------KSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAE 454

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------------- 631
           ++VA+ S+I+ Y   GL   A KM  +M++ +IKP                         
Sbjct: 455 DLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIH 514

Query: 632 ----------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                     D+ + NSLV+ Y+  G   +A  I + +   GI    V+W+++I G  Q+
Sbjct: 515 VHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGI----VSWSAMIGGLAQH 570

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK-NGFIKDAYV 740
            + R++L+ F QM +  I PN  T+ S+L  C   GL+   +    L  K  G       
Sbjct: 571 GHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEH 630

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGN 784
              ++D+  + G L  A  + ++     + A W  ++    I+ N
Sbjct: 631 YACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKN 675



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 5/294 (1%)

Query: 214 HAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H+ ++KM      D  V   LI  Y + G    A   F L   +    W+S +  Y + G
Sbjct: 312 HSALMKMD--MEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCG 369

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            ++ E + ++  ++ +G+ F    L+ ILK      A     +VH   IK G+ +D ++ 
Sbjct: 370 YDI-EAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVA 428

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L++ YGKC  +E A K+F EV   ED + +  +I    +    E A+K++  MQ    
Sbjct: 429 NSLLDSYGKCCLLEDAAKVF-EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDI 487

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           K  +     +  ACA + A+ +GKQIH +VLK  L S++   N L++MY++   ++ A+ 
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASC 547

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +F+ +    + SW++MI      G+   A  LF +M  + I P+ IT   +LS 
Sbjct: 548 IFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSA 601



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 106/229 (46%), Gaps = 6/229 (2%)

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFG-GEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
           AAK F +  +     ++S +  Y  +G GE  E L+++  +  + +   + I + +   C
Sbjct: 444 AAKVFEVCPAEDLVAYTSMITAYSQYGLGE--EALKMYLRMQDRDIKPDAFIFSSLFNAC 501

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
             L A+  G ++H  ++K G   DV    +L+N Y KC  ++ A+ +F+E+S     + W
Sbjct: 502 ANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEIS-WRGIVSW 560

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           + +I    ++     A++LF +M  +       T+V +L AC   G   E ++  G + K
Sbjct: 561 SAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEK 620

Query: 425 S-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
              +        C++ +  R  +L+ A  +   M    + + W +++ +
Sbjct: 621 LFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGA 669


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 266/818 (32%), Positives = 433/818 (52%), Gaps = 74/818 (9%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            +++LK C +     LG  +H  L       D  L  +L+  Y K  D  +A  +F  + +
Sbjct: 56   SLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMEN 115

Query: 358  LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEG 415
             + D++ ++ II     N     A+++F ++        +      +++AC K G F  G
Sbjct: 116  SKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTG 175

Query: 416  KQIHGYVLKSA-LESNLSVCNCLISMYSRN---NKLELATRVFDSMKDHNLSSWNSMISS 471
              + G+VLK+   +S++ V   LI M+ +      LE A +VFD M++ N+ +W  MI+ 
Sbjct: 176  LCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITR 235

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                GY D A  LF +M                                  + S G+ P+
Sbjct: 236  LAQYGYNDEAIDLFLEM----------------------------------LVSSGYVPD 261

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +++ ++    E++ L  G+E H +++R+GL  DL VG SL+DMY K   +Q A++VFD
Sbjct: 262  RFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFD 321

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKML---NQMEEEEIKPDLVSWNSLVS------- 641
             M+  N+++W +L++GY   G     + M    N + +  + P+  +++ ++        
Sbjct: 322  GMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPD 381

Query: 642  ---GYSIWGQS-KEALVIIHHMKNS--GIYP------------------NVVTWTSLISG 677
               G  + GQ+ K  L  I  + N    +Y                   N+V+ T +   
Sbjct: 382  FDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDT 441

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
            ++++ N         +++      +S T +SLL     +G +  G++IH + +K GF  D
Sbjct: 442  NVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTD 501

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
              V   LI MYSK GN ++A +VF    +  + +W  +I GFA +G   +A+ LF+ +LE
Sbjct: 502  LSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLE 561

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
            TG +P+ +T+ A+L+AC + GL++E WK+F SM  ++ I+P +EHY+CMVDLLG++G L 
Sbjct: 562  TGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLS 621

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA +FI +MPF  DA +W   LGSCR+H + +  E A++ + + EP + A Y L+ NL A
Sbjct: 622  EAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYA 681

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
               RWEDV  +R +M +  +      SWI+++  VH F      HP   +IY +L  L  
Sbjct: 682  TEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELAL 741

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            ++K +GYVP+T  V  D+++E+K + L  H+EKLA+ + L+ T +  PIRV KN RVC D
Sbjct: 742  KIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGD 801

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CHTA KY+S+V GREI +RD  RFHH ++G CSCND W
Sbjct: 802  CHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 211/460 (45%), Gaps = 42/460 (9%)

Query: 240 FGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE-LHGKGVIFRSRILT 298
             D  SA K F     ++   W+  +     +G    E ++++ E L   G +     LT
Sbjct: 208 LADLESARKVFDKMREKNVVTWTLMITRLAQYGYN-DEAIDLFLEMLVSSGYVPDRFTLT 266

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
            ++ +C ++    LG E+H+ +I+ G   D+ + C+L++ Y KC  V+ A K+F  + + 
Sbjct: 267 GLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE- 325

Query: 359 EDDLLWNEIIMVKLRNEKW--ENAIKLFREMQFSSAKAIS-RTIVKMLQACAKVGAFHEG 415
            + + W  ++   +R        A+++F  M      A +  T   +L+ACA +  F  G
Sbjct: 326 HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG 385

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +Q+HG  +K  L +   V N L+S+Y+++ ++E A + FD + + NL             
Sbjct: 386 EQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNL------------- 432

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
               V+ ++ +  N                  F   S Q+   L R ++ +G   +  + 
Sbjct: 433 ----VSETVVDDTNVK---------------DFNLNSEQD---LDREVEYVGSGVSSFTY 470

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           + +L     +  +  G + H  +++ G   DL V  +L+ MY K    + A +VF++M++
Sbjct: 471 ASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMED 530

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            N++ W S+I+G+   G    A ++   M E  +KP+ V++ +++S  S  G   EA   
Sbjct: 531 CNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKH 590

Query: 656 IHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
              M+ N GI P +  +  ++    ++    E+++F   M
Sbjct: 591 FTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSM 630


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 809

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/791 (32%), Positives = 421/791 (53%), Gaps = 76/791 (9%)

Query: 320  LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            + K G   +   +  L++ + +   V+ A ++F  + D + ++L+  ++    +    + 
Sbjct: 60   IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPI-DKKLNVLYYTMLKGFAKVSDLDK 118

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            A+K F  M+    + +      +L+ C        GK+IHG ++KS    +L     L +
Sbjct: 119  ALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            MY++  ++  A +VFD M +                                    D+++
Sbjct: 179  MYAKCRQVHEARKVFDRMPER-----------------------------------DLVS 203

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
            WN +++G+  +G  +  L ++  M     +P+  ++  VL AV+ LRL++ G+E HGY +
Sbjct: 204  WNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAM 263

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            R G D  + + T+L+DMY K   L+ A+ +FD M  RN+V+WNS+I  Y        A  
Sbjct: 264  RAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMV 323

Query: 620  MLNQMEEEEIKPDLVSW-----------------------------------NSLVSGYS 644
            +  +M +E +KP  VS                                    NSL+S Y 
Sbjct: 324  IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYC 383

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
               +   A  +   +++  I    V+W ++I G  QN    E+L +F QMQ   +KP++ 
Sbjct: 384  KCKEVDTAASMFGKLQSRTI----VSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTF 439

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T  S++     L +  + K IH + ++N   K+ +V T L+DMY+K G +  AR +F   
Sbjct: 440  TYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
            + + + +WN MI G+  +G GK A+ LF E+ +   +P+ +TF ++++AC +SGLVE G 
Sbjct: 500  SERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGL 559

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            K F  M  +Y+I P+++HY  MVDLLG+AG L+EAWDFI  MP KP   ++GA+LG+C+I
Sbjct: 560  KCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H ++ +AE  + RLF+L P +   + L+ N+   ++ WE V ++R SM   G++     S
Sbjct: 620  HKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
             ++I   VH F +    HP++ +IY  L  L+ ++K+ GYVPDT  +   ++++ K ++L
Sbjct: 680  MVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLL 738

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
             SH+EKLAI +GL+ T +   I V KN RVC+DCH A KY+SLV GREI +RD  RFHHF
Sbjct: 739  SSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHF 798

Query: 1065 REGECSCNDCW 1075
            + G CSC D W
Sbjct: 799  KNGACSCGDYW 809



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 214/484 (44%), Gaps = 71/484 (14%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            T +LK+C       +G E+H  L+K GF  D+     L N Y KCR V  A K+F  + 
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMP 197

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D + WN I+    +N     A+++   M   + K    TIV +L A + +     GK
Sbjct: 198 E-RDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGK 256

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IHGY +++  +S +++   L+ MY++   L+ A  +FD M + N+ SWNSMI +Y    
Sbjct: 257 EIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNE 316

Query: 477 YVDVAWSLFNKMNSSRIQP-DIITWNCLLS---------GHFTH---------------- 510
               A  +F KM    ++P D+     L +         G F H                
Sbjct: 317 NPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVN 376

Query: 511 -------------------GSYQNVLTLLRGMQSLGFRPNGSSVSV-------------- 537
                              G  Q+   +      LGF  NG  +                
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKP 436

Query: 538 -------VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
                  V+ A+ EL +  + +  HG ++RN LD +++V T+L+DMY K   +  A+ +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
           D M  R++  WN++I GY   G+   A ++  +M++  I+P+ V++ S++S  S  G  +
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVE 556

Query: 651 EALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
             L   H MK N  I P++  + +++    +     E+  F +QM    +KP      ++
Sbjct: 557 AGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMP---VKPAVNVYGAM 613

Query: 710 LQTC 713
           L  C
Sbjct: 614 LGAC 617



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 11/227 (4%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +V SLI  Y +  +  +AA  F    SR+   W++ +  +   G  + E L  + ++  +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPI-EALNYFSQMQAR 432

Query: 289 GV----IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            V         ++T I +L     A W    +H  +++   D +V +  AL++ Y KC  
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKW----IHGVVMRNCLDKNVFVTTALVDMYAKCGA 488

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           +  A  +F  +S+      WN +I     +   + A++LF EMQ  + +    T + ++ 
Sbjct: 489 IMIARLIFDMMSE-RHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVIS 547

Query: 405 ACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           AC+  G    G K  H      ++E ++     ++ +  R  +L  A
Sbjct: 548 ACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEA 594



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           LL+ C  L  L   + I  L  KNG  ++    T L+ ++ + G++  A  VF     K 
Sbjct: 43  LLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKL 99

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +  M+ GFA   +  +A+  F  + +   +P    FT LL  C +   +  G
Sbjct: 100 NVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVG 154


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/753 (33%), Positives = 413/753 (54%), Gaps = 72/753 (9%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D + W+ +I     NEK   AI  F +M              + +AC+       GK I 
Sbjct: 6    DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65

Query: 420  GYVLKSA-LESNLSVCNCLISMYSRNN-KLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            G++LK+   ES++ V   LI M+ + N  LE A +VFD M D N                
Sbjct: 66   GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRN---------------- 109

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
                               ++TW  +++     G  ++ + L   M   G+ P+  ++S 
Sbjct: 110  -------------------VVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSG 150

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDNMK 594
            V+ A  E+ LL  GR+ H  ++++GLD D+ VG SL+DMY K   +  + +A++VFD M 
Sbjct: 151  VVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMP 210

Query: 595  NRNIVAWNSLISGYCFKG-LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS----IW-GQ 648
              N+++W ++I+GY   G     A ++  +M + ++KP+  +++S++   +    IW G+
Sbjct: 211  VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGE 270

Query: 649  SKEALVI------IHHMKNSGIY--------------------PNVVTWTSLISGSLQNE 682
               ALV+      I+ + NS I                      N+V++ ++++   ++ 
Sbjct: 271  QVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSL 330

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
            N  E+ + F +++      N+ T +SLL     +G +  G++IH   LK+GF  + ++  
Sbjct: 331  NSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICN 390

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             LI MYS+ GN+++A +VF +  +  + SW  MI GFA +G    A+  FH++LE G  P
Sbjct: 391  ALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSP 450

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + +T+ A+L+AC + GL+ EG K+F SM  ++ I+P +EHY+C+VDLLG++G+L+EA + 
Sbjct: 451  NEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMEL 510

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            + +MPFK DA +    LG+CR+HG+++  + A+  + + +P + A Y L+ NL A + +W
Sbjct: 511  VNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQW 570

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            E+V  +R  M E  +      SWI+++  VH F      HP   EIY EL  L  ++K+L
Sbjct: 571  EEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKEL 630

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GY+P T  V  D++EE+K + L  H+EK+A+ YG + T +  PIRV KN RVC DCHTA 
Sbjct: 631  GYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAF 690

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KY S+VR +EI LRD  RFHHF++G CSCND W
Sbjct: 691  KYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 248/534 (46%), Gaps = 46/534 (8%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           GD  SA K F     R+   W+  +  ++  G   ++ ++++ ++   G +     L+ +
Sbjct: 93  GDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFS-RDAVDLFLDMVLSGYVPDRFTLSGV 151

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC---RDVESANKLFSEVSD 357
           +  C ++    LG + H  ++K G D DV + C+L++ Y KC     V+ A K+F  +  
Sbjct: 152 VSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMP- 210

Query: 358 LEDDLLWNEIIMVKLRNEKWE-NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           + + + W  II   +++   +  AI+LF EM     K    T   +L+ACA +     G+
Sbjct: 211 VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGE 270

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q++  V+K  L S   V N LISMYSR   +E A + FD + + NL S+N+++++Y    
Sbjct: 271 QVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSL 330

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A+ LFN++  +    +  T+  LLSG                          SS+ 
Sbjct: 331 NSEEAFELFNEIEGAGTGVNAFTFASLLSG-------------------------ASSIG 365

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            + +          G + H  IL++G   +L++  +L+ MY +   ++ A +VF+ M + 
Sbjct: 366 AIGK----------GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDG 415

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+++W S+I+G+   G    A +  ++M E  + P+ V++ +++S  S  G   E L   
Sbjct: 416 NVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHF 475

Query: 657 HHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
             MK   GI P +  +  ++    ++ +  E+++    M     K ++  + + L  C  
Sbjct: 476 KSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMP---FKADALVLRTFLGACRV 532

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            G +  GK    + L+     D      L ++++ +G  +   E+ +K   + L
Sbjct: 533 HGNMDLGKHAAEMILEQD-PHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNL 585



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 124/246 (50%), Gaps = 6/246 (2%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY-ESFG 272
           +A ++KM ++ + + +  SLI  Y   G+  +A KAF + F ++   +++ +  Y +S  
Sbjct: 273 YALVVKM-RLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN 331

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            E  E  E++ E+ G G    +     +L   + + A   G ++H+ ++K GF  ++H+ 
Sbjct: 332 SE--EAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHIC 389

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y +C ++E+A ++F+E+ D  + + W  +I    ++     A++ F +M  +  
Sbjct: 390 NALISMYSRCGNIEAAFQVFNEMGD-GNVISWTSMITGFAKHGFATRALETFHKMLEAGV 448

Query: 393 KAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                T + +L AC+ VG   EG K      ++  +   +    C++ +  R+  LE A 
Sbjct: 449 SPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAM 508

Query: 452 RVFDSM 457
            + +SM
Sbjct: 509 ELVNSM 514



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 85/224 (37%), Gaps = 52/224 (23%)

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN---------- 816
           + L SW+ +I  +A      EAI  F ++LE GF P+   FT +  AC N          
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 817 ---------------------------SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
                                      +G +E  +K FD M  D N++     ++ M+  
Sbjct: 65  FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP-DRNVVT----WTLMITR 119

Query: 850 LGKAGYLDEAWDFIRTM---PFKPDATIWGALLGSCRIHGHL----EYAEIASRRLFKLE 902
             + G+  +A D    M    + PD      ++ +C   G L    ++  +  +    L+
Sbjct: 120 FQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLD 179

Query: 903 PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            C   +   ++++ A       V+  R   D + V +V+ W+ I
Sbjct: 180 VCVGCS---LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAI 220


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 268/864 (31%), Positives = 444/864 (51%), Gaps = 72/864 (8%)

Query: 245  SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
            SA + F       +  WSS +  Y S     +E L  +  +  +GV      L I+LK  
Sbjct: 55   SARRVFDETPDPCHVSWSSLVTAY-SNNALPREALAAFRAMRARGVRCNEFALPIVLKCA 113

Query: 305  TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
                   LGV+VHA  +  G   D+ +  AL+  YG    V+ A ++F E +   + + W
Sbjct: 114  PDA---GLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSW 170

Query: 365  NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            N ++   ++N++  +A++LF EM +S  +        ++ AC        G+++H  V++
Sbjct: 171  NGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVR 230

Query: 425  SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
            +  + ++   N L+ MYS+                               LG + +A  +
Sbjct: 231  TGYDKDVFTANALVDMYSK-------------------------------LGDIHMAALV 259

Query: 485  FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
            F K+  +    D+++WN  +SG   HG  Q+ L LL  M+S G  PN  ++S +L+A   
Sbjct: 260  FGKVPKT----DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315

Query: 545  LRLLKYG--RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
                 +   R+ HG++++   D D Y+G +L+DMY K   L +A++VF+ +  ++++ WN
Sbjct: 316  AGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWN 375

Query: 603  SLISGYCFKG-------LFVNAKKMLNQMEEEEIKPDLVSWNSL--VSGYSIWGQSKEAL 653
            +LISG    G       LF   +K  + +    +   L S  SL  +S  +      E +
Sbjct: 376  ALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKI 435

Query: 654  VIIH--HMKNSGI--------------------YPNVVTWTSLISGSLQNENYRESLKFF 691
              +   H+ N  I                      N++ +TS+I+   Q ++  +++K F
Sbjct: 436  GFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLF 495

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
            ++M ++ ++P+   +SSLL  C  L   + GK++H   +K  F+ D +    L+  Y+K 
Sbjct: 496  MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKC 555

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G+++ A   F    +K + SW+ MI G A +G+GK A+ +F  +++    P+ IT T++L
Sbjct: 556  GSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL 615

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             AC ++GLV+E   YF SM   + I  T EHYSCM+DLLG+AG LD+A + + +MPF+ +
Sbjct: 616  CACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEAN 675

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A +WGALL + R+H   E  ++A+ +LF LEP  S  + L+ N  A +  W++V ++R  
Sbjct: 676  AAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKL 735

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M +  VK     SW+++   VH F      HP   +IY +L  L   M K GYVP+    
Sbjct: 736  MKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVD 795

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+D+ EK  +L  H+E+LA+ + L+ T + APIRV KN R+C DCH A K++S +  R
Sbjct: 796  LHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSR 855

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD  RFHHF +G CSC D W
Sbjct: 856  EIIIRDINRFHHFSDGACSCGDYW 879



 Score =  216 bits (551), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 175/700 (25%), Positives = 302/700 (43%), Gaps = 124/700 (17%)

Query: 309 AFWLGVEVHASLIKRGFDFDVH-LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
           + +LG  +HA L+K G    +H  +  L++FY KCR   SA ++F E  D    + W+ +
Sbjct: 19  SLFLGAHIHAHLLKSGL---LHAFRNHLLSFYSKCRLPGSARRVFDETPD-PCHVSWSSL 74

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           +     N     A+  FR M+    +     +  +L+     G    G Q+H   + + L
Sbjct: 75  VTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQVHAVAVSTGL 131

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFD-SMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
             ++ V N L++MY     ++ A RVFD + +D N  SWN M+S++        A  LF 
Sbjct: 132 SGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFG 191

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
           +M           W+                         G RPN    S V+ A T  R
Sbjct: 192 EM----------VWS-------------------------GVRPNEFGFSCVVNACTGSR 216

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L+ GR+ H  ++R G D D++   +L+DMY K   +  A  VF  +   ++V+WN+ IS
Sbjct: 217 DLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFIS 276

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS---------------------------- 638
           G    G   +A ++L QM+   + P++ + +S                            
Sbjct: 277 GCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACA 336

Query: 639 ---------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                    LV  Y+ +G   +A  +   +       +++ W +LISG      + ESL 
Sbjct: 337 DSDDYIGVALVDMYAKYGLLDDARKVFEWIPRK----DLLLWNALISGCSHGGCHGESLS 392

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            F +M++E    N TT++++L++   L  + +  ++H L  K GF+ D++V  GLID Y 
Sbjct: 393 LFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYW 452

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           K   L+ A +VF + ++  + ++  MI   +   +G++AI LF E+L  G +PD    ++
Sbjct: 453 KCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSS 512

Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           LL AC +    E+G K   +       +  +   + +V    K G +++A      +P K
Sbjct: 513 LLNACASLSAYEQG-KQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDK 571

Query: 870 PDATIWGALLGSCRIHGHLEYAEIASRRLF--KLEP-----------CNSA--------- 907
                W A++G    HGH + A    RR+   ++ P           CN A         
Sbjct: 572 -GVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGY 630

Query: 908 ---------------NYNLMMNLLAMSNRWEDVERLRHSM 932
                          +Y+ M++LL  + + +D   L +SM
Sbjct: 631 FSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 670



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 133/577 (23%), Positives = 232/577 (40%), Gaps = 135/577 (23%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           +I  +L   A   +   G  IH ++LKS L       N L+S YS+      A RVFD  
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAFR--NHLLSFYSKCRLPGSARRVFDET 63

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            D                                   P  ++W+ L++ +  +   +  L
Sbjct: 64  PD-----------------------------------PCHVSWSSLVTAYSNNALPREAL 88

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
              R M++ G R N  ++ +VL+   +  L   G + H   +  GL  D++V  +L+ MY
Sbjct: 89  AAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQVHAVAVSTGLSGDIFVANALVAMY 145

Query: 578 VKNDCLQNAQEVFDN-MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP----- 631
                +  A+ VFD   ++RN V+WN ++S +       +A ++  +M    ++P     
Sbjct: 146 GGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGF 205

Query: 632 ------------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
                                         D+ + N+LV  YS  G    A ++   +  
Sbjct: 206 SCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPK 265

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ--TCGGLGLL 719
           +    +VV+W + ISG + + + + +L+  +QM+   + PN  T+SS+L+     G G  
Sbjct: 266 T----DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAF 321

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             G++IH   +K     D Y+   L+DMY+K G L  AR+VF     K L  WN +I G 
Sbjct: 322 ALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGC 381

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN----------------------- 816
           +  G   E++ LF  + + G   +  T  A+L +  +                       
Sbjct: 382 SHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDS 441

Query: 817 ---SGLVEEGW---------KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
              +GL++  W         K F+  S+D NII     ++ M+  L +  + ++A     
Sbjct: 442 HVVNGLIDSYWKCNCLRYANKVFEEHSSD-NIIA----FTSMITALSQCDHGEDAIKLFM 496

Query: 865 TM---PFKPDATIWGALLGSC----------RIHGHL 888
            M     +PD  +  +LL +C          ++H HL
Sbjct: 497 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHL 533



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 198/463 (42%), Gaps = 43/463 (9%)

Query: 194 GF-CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFF 251
           GF C +N     R L + +  HA +++ G  ++ D     +L+  Y + GD   AA  F 
Sbjct: 204 GFSCVVNACTGSRDLEAGRKVHAMVVRTG--YDKDVFTANALVDMYSKLGDIHMAALVFG 261

Query: 252 LYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFW 311
                    W++F+       G  Q  LE+  ++   G++     L+ ILK C    A  
Sbjct: 262 KVPKTDVVSWNAFISGC-VLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGA 320

Query: 312 LGV--EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
             +  ++H  +IK   D D ++  AL++ Y K   ++ A K+F  +   +D LLWN +I 
Sbjct: 321 FALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPR-KDLLLWNALIS 379

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
                     ++ LF  M+   +     T+  +L++ A + A  +  Q+H    K    S
Sbjct: 380 GCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLS 439

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           +  V N LI  Y + N L  A +VF+     N+ ++ SMI   T L   D          
Sbjct: 440 DSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMI---TALSQCD---------- 486

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                               HG  ++ + L   M   G  P+   +S +L A   L   +
Sbjct: 487 --------------------HG--EDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 524

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G++ H ++++     D++ G +L+  Y K   +++A   F  + ++ +V+W+++I G  
Sbjct: 525 QGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLA 584

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
             G    A  +  +M +E I P+ ++  S++   +  G   EA
Sbjct: 585 QHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEA 627


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 276/918 (30%), Positives = 459/918 (50%), Gaps = 92/918 (10%)

Query: 204  FRCLSSVKSK------HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRS 257
             +C++S+ S       H  + K+G +  +  +  +LI  Y   G    A + F    +R 
Sbjct: 205  LKCIASLGSITEGEVIHGLLEKLG-LGEACAVANALIALYSRCGCMEDAMQVFDSMHARD 263

Query: 258  YADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
               W+S +  Y S G      ++++ ++  +G    S  +  +L  C +L    +G  VH
Sbjct: 264  AISWNSTISGYFSNGWH-DRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVH 322

Query: 318  ASLIKRGFDFDVH---------LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
               +K G  +D+          L   L+  Y KC D+ SA ++F  +    +  +WN I+
Sbjct: 323  GYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIM 382

Query: 369  MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
                +  ++E ++ LF +M           +  +L+    +    +G   HGY++K    
Sbjct: 383  GGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFG 442

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            +  +VCN LIS Y+++N                                +D A  +F++M
Sbjct: 443  TQCAVCNALISFYAKSN-------------------------------MIDNAVLVFDRM 471

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                   D I+WN ++SG  ++G     + L   M   G   + +++  VL A       
Sbjct: 472  P----HQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYW 527

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
              GR  HGY ++ GL  +  +  +L+DMY       +  ++F NM  +N+V+W ++I+ Y
Sbjct: 528  FVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSY 587

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY----------SIWGQS--------- 649
               GLF     +L +M  + IKPD+ +  S++ G+          S+ G +         
Sbjct: 588  TRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLL 647

Query: 650  ----------------KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
                            +EA ++  H+ N     ++++W +LI G  +N    ES   F  
Sbjct: 648  PVANALMEMYVNCRNMEEARLVFDHVTNK----DIISWNTLIGGYSRNNFANESFSLFSD 703

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            M  +  KPN+ TM+ +L     +  L+ G+EIH   L+ GF++D+Y +  L+DMY K G 
Sbjct: 704  MLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGA 762

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            L  AR +F +   K L SW  MI G+ ++G GK+A+ LF ++  +G +PD  +F+A+L A
Sbjct: 763  LLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYA 822

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C +SGL  EGWK+F++M  +Y I P ++HY+C+VDLL   G L EA++FI +MP +PD++
Sbjct: 823  CCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSS 882

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            IW +LL  CRIH  ++ AE  + R+FKLEP N+  Y L+ N+ A + RWE V++L++ + 
Sbjct: 883  IWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIG 942

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
              G++     SWI++   VHVF A+   HP    I   L H+   M++ G+ P  +    
Sbjct: 943  GRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLM 1002

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
              ++    + L  H+ KLA+ +G++      PIRV KN++VCS CH AAK++S +  REI
Sbjct: 1003 GANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREI 1062

Query: 1054 FLRDGARFHHFREGECSC 1071
             LRD +RFHHF  G CSC
Sbjct: 1063 ILRDSSRFHHFEGGRCSC 1080



 Score =  193 bits (490), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 258/587 (43%), Gaps = 92/587 (15%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH-- 330
           G++   L + G   G GV    R    +++LC +  +       HA L++ G    +   
Sbjct: 77  GDLAAALRLLGSDGGVGV----RSYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSV 131

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSD-LEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           L   L+  Y KC D+  A  +F E+   + D  +W  ++    +   ++  + LFR+MQ 
Sbjct: 132 LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                 +  +  +L+  A +G+  EG+ IHG + K  L    +V N LI++YSR   +E 
Sbjct: 192 CGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMED 251

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VFDSM   +  SWNS IS Y   G+ D A  LF+KM S   +   +T          
Sbjct: 252 AMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVT---------- 301

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL-- 567
                 VL++L     LGF   G  V                   HGY +++GL +DL  
Sbjct: 302 ------VLSVLPACAELGFELVGKVV-------------------HGYSMKSGLLWDLES 336

Query: 568 -------YVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKK 619
                   +G+ L+ MYVK   + +A+ VFD M ++ N+  WN ++ GY     F  +  
Sbjct: 337 VQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLL 396

Query: 620 MLNQMEEEEIKPD--------------------LVS---------------WNSLVSGYS 644
           +  QM E  I PD                    LV+                N+L+S Y+
Sbjct: 397 LFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYA 456

Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                  A+++   M     + + ++W S+ISG   N    E+++ F++M  +  + +ST
Sbjct: 457 KSNMIDNAVLVFDRMP----HQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDST 512

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T+ S+L  C        G+ +H   +K G I +  +A  L+DMYS   +  S  ++FR  
Sbjct: 513 TLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNM 572

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           A K + SW  MI  +   G   +   L  E++  G +PD    T++L
Sbjct: 573 AQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVL 619


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/762 (32%), Positives = 409/762 (53%), Gaps = 67/762 (8%)

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            +E A +LF  + + ++ + WN ++    +    +  +KLF +M+    K    T+  +L+
Sbjct: 1    MELAERLFFGMPE-KNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLK 59

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
             CA  G+  EGK +H   L+S  E +  +   L+ MYS+   +  A +VF  +++ ++ +
Sbjct: 60   GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
            W++MI+     G+   A  LF+ M                                    
Sbjct: 120  WSAMITGLDQQGHGQEAAELFHLMRRK--------------------------------- 146

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
              G RPN  ++S ++   T +  L+YG+  HG I + G + D  V   L+ MY+K+ C++
Sbjct: 147  --GARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVE 204

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV-SGY 643
            +  +VF+ M N ++V+WN+L+SG+          ++  QM  E  KP++ ++ S++ S  
Sbjct: 205  DGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCS 264

Query: 644  SIWGQSKEALVIIHHMKNSG------------------------------IYPNVVTWTS 673
            S+        V  H +KNS                               +  ++ +WT 
Sbjct: 265  SLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTV 324

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +ISG  Q +   +++K+F QMQ+E IKPN  T++S L  C  +  L+NG+++H + +K G
Sbjct: 325  IISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAG 384

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
               D +V + L+D+Y K G ++ A  +F+   ++ + SWN +I G++ +G G++A+  F 
Sbjct: 385  HFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFR 444

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
             +L  G  PD  TF  +L+AC   GLVEEG K FDSMS  Y I P+IEHY+CMVD+LG+A
Sbjct: 445  MMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRA 504

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G  +E   FI  M   P + IW  +LG+C++HG++++ E A+++LF++EP   ++Y L+ 
Sbjct: 505  GKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLS 564

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A   RW+DV  +R  M   G+K     SW+++D  VHVF ++   HP   EIY +L 
Sbjct: 565  NIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLD 624

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L   +  +GYVP T  V  ++  +EK + L  H+E+LA+ + L+ T +  PIR+ KN R
Sbjct: 625  KLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLR 684

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +C DCH   K +S +  +EI +RD  RFHHF+ G CSC D W
Sbjct: 685  ICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 278/920 (30%), Positives = 454/920 (49%), Gaps = 92/920 (10%)

Query: 197  FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
             L      R LS  +  HA+++ +G     +++   L+  YL+        + F     R
Sbjct: 35   LLRAAGDDRLLSQGRRIHARIVSLGL---EEELGNHLLRLYLKCESLGDVEEVFSRLEVR 91

Query: 257  SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
              A W++ +  Y   G + +  + ++  +  +GV   +     +LK C +L     G  +
Sbjct: 92   DEASWTTIITAYTEHG-QAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150

Query: 317  HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNE 375
            HA +++ G +    L   L++ YG C  V SA  LF     +E DL+ WN  I    ++ 
Sbjct: 151  HAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFER---MERDLVSWNAAIAANAQSG 207

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
              + A++LF+ MQ    +    T+V  L  CAK+    + + IH  V +S LE  L V  
Sbjct: 208  DLDMALELFQRMQLEGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVST 264

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             L S Y+R                               LG++D A  +F++      + 
Sbjct: 265  ALASAYAR-------------------------------LGHLDQAKEVFDRA----AER 289

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D+++WN +L  +  HG       L   M   G  P  S V++V  A T    L++GR  H
Sbjct: 290  DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPP--SKVTLV-NASTGCSSLRFGRMIH 346

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
               L  GLD D+ +G +L+DMY +    + A+ +F+ +   N V+WN++I+G   KG   
Sbjct: 347  ACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMK 405

Query: 616  NAKKMLNQMEEEEIKPDLVSW--------------------------------------- 636
             A ++  +M+ E + P   ++                                       
Sbjct: 406  RALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG 465

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             ++V  Y+  G   EA            + +VV+W ++IS   Q+ + + +L FF +M  
Sbjct: 466  TAVVKMYASCGAIDEAAASFQRGAMEDRH-DVVSWNAIISSLSQHGHGKRALGFFRRMDL 524

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
              + PN  T  ++L  C G   L  G  +H     +G   + +VAT L  MY + G+L+S
Sbjct: 525  HGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLES 584

Query: 757  AREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            ARE+F K A  + +  +N MI  ++  G   EA+ LF  + + G +PD  +F ++L+AC 
Sbjct: 585  AREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACS 644

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + GL +EGW+ F SM   Y I P+ +HY+C VD+LG+AG+L +A + IR M  KP   +W
Sbjct: 645  HGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVW 704

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
              LLG+CR +  ++   +A+  + +L+P + + Y ++ N+LA + +W++   +R  M+  
Sbjct: 705  KTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESR 764

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            G++     SWI+I   VH F A    HP + EIY EL  L +E++++GYVPDTR V + +
Sbjct: 765  GLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKV 824

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            DE EK ++L  H+E+LAI  G+M + S   +RV+KN RVC DCH A K++S +  +EI +
Sbjct: 825  DEAEKERLLCQHSERLAIALGVM-SSSTDTVRVMKNLRVCEDCHNATKFISKIVNKEIVV 883

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHF +G CSC D W
Sbjct: 884  RDTHRFHHFVDGSCSCGDYW 903



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/531 (24%), Positives = 225/531 (42%), Gaps = 85/531 (16%)

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           +V++L+A        +G++IH  ++   LE  L   N L+ +Y +   L     VF  ++
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLE 89

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
             + +SW ++I++YT                                    HG  +  + 
Sbjct: 90  VRDEASWTTIITAYT-----------------------------------EHGQAKRAIW 114

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           +   MQ  G R +  +   VL+A   L  L  GR  H +I+ +GL+    +   L+ +Y 
Sbjct: 115 MFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYG 174

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
              C+ +A  +F+ M+ R++V+WN+ I+     G    A ++  +M+ E ++P  ++   
Sbjct: 175 SCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARIT--- 230

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYP-------------------------------N 667
           LV   S+  + ++A  I   ++ SG+                                 +
Sbjct: 231 LVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERD 290

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           VV+W +++    Q+ +  E+   F +M  E I P+  T   L+    G   L+ G+ IH 
Sbjct: 291 VVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT---LVNASTGCSSLRFGRMIHA 347

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
             L+ G  +D  +   L+DMY++ G+ + AR +F       + SWN MI G +  G  K 
Sbjct: 348 CALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAV-SWNTMIAGSSQKGQMKR 406

Query: 788 AILLFHELLETGFQPDAITFTALLAAC----KNSGLVEEGWKYFDSM-STDYNIIPTIEH 842
           A+ LF  +   G  P   T+  LL A     + +  + EG K    + S  Y   P I  
Sbjct: 407 ALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG- 465

Query: 843 YSCMVDLLGKAGYLDEAW-DFIR-TMPFKPDATIWGALLGSCRIHGHLEYA 891
            + +V +    G +DEA   F R  M  + D   W A++ S   HGH + A
Sbjct: 466 -TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRA 515


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/650 (36%), Positives = 363/650 (55%), Gaps = 51/650 (7%)

Query: 426  ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
            A E +    N +++ Y RN +++ A  +FDS  + +  SWN++++ Y     ++ A  +F
Sbjct: 226  APEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMF 285

Query: 486  NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
            NKM     Q D+++WN ++SG+   G       L                      V  +
Sbjct: 286  NKMP----QRDVVSWNTMVSGYARRGDMAEARRLF--------------------DVAPI 321

Query: 546  RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
            R                   D++  T+++  Y +N  L+ A+ VFD M ++N V+WN+++
Sbjct: 322  R-------------------DVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMM 362

Query: 606  SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
            + Y  + +   AK++ + M    +     SWN++++GY+  G   EA  I   M      
Sbjct: 363  AAYVQRRMMEEAKELFDAMPCRNV----ASWNTMLTGYAQAGMLDEARAIFGMMPQK--- 415

Query: 666  PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             + V+W ++++   Q     E+L+ F +M +     N +  + +L TC  +  L+ G ++
Sbjct: 416  -DAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 474

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            H   +K G+    +V   L+ MY K G+++ A   F +   + + SWN MI G+A +G G
Sbjct: 475  HSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFG 534

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            KEA+ +F  + +T  +PD IT   +LAAC +SGLVE+G  YF SM  D+ +    EHY+C
Sbjct: 535  KEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTC 594

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            M+DLLG+AG LDEA + ++ MPF+PD+T+WGALLG+ RIH + E    A+ ++F+LEP N
Sbjct: 595  MIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPEN 654

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            +  Y L+ N+ A S +W DV+++RH M E GVK V  +SWI++   VH FS   + HP  
Sbjct: 655  AGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPER 714

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
             +IY  L  L   MKK GYV  T  V  D++EEEK  +L  H+EKLA+ YG++K     P
Sbjct: 715  EDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRP 774

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IRVIKN RVC DCHTA K +S + GR I LRD  RFHHFR+G CSC D W
Sbjct: 775  IRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 17/378 (4%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           ALM  Y +   +E A K+F+++    D + WN ++    R      A +LF         
Sbjct: 267 ALMAGYVQRSQIEEAQKMFNKMPQ-RDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVF 325

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T   ++   A+ G   E K+    V  +  + N    N +++ Y +   +E A  +
Sbjct: 326 ----TWTAIVSGYAQNGMLEEAKR----VFDAMPDKNAVSWNAMMAAYVQRRMMEEAKEL 377

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           FD+M   N++SWN+M++ Y   G +D A ++F  M     Q D ++W  +L+ +   G  
Sbjct: 378 FDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMP----QKDAVSWAAMLAAYSQIGFS 433

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
           +  L L + M   G   N S+ + VL    ++  L+ G + H  +++ G     +VG +L
Sbjct: 434 EETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNAL 493

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           + MY K   ++ A   F+ M+ R++V+WN++I+GY   G    A ++ + M +   KPD 
Sbjct: 494 LAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDD 553

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           ++   +++  S  G  ++ +   + M ++ G+      +T +I    +     E++    
Sbjct: 554 ITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMK 613

Query: 693 QMQQEDIKPNSTTMSSLL 710
            M  E   P+ST   +LL
Sbjct: 614 DMPFE---PDSTMWGALL 628



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 4/242 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + G    A   F +   +    W++ L  Y   G   +E L+++ E+   G  
Sbjct: 391 TMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFS-EETLQLFKEMGRCGEW 449

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L  C  + A   G+++H+ LIK G+     +  AL+  Y KC  +E A+  
Sbjct: 450 VNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSA 509

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+ +  D + WN +I    R+   + A+++F  M+ +S K    T+V +L AC+  G 
Sbjct: 510 FEEMEE-RDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGL 568

Query: 412 FHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G    +       + +      C+I +  R  +L+ A  +   M  + + + W +++
Sbjct: 569 VEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL 628

Query: 470 SS 471
            +
Sbjct: 629 GA 630



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 32/318 (10%)

Query: 630 KPDL--VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
           KPD+  +  N  ++ +   G+  +A  +   M       +  T+ ++++G   N    ++
Sbjct: 102 KPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRR----STSTYNTMLAGYAANGRLPQA 157

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           L FF  +     +P+S + ++LL     LG+  +  ++  L      +KD+     +I  
Sbjct: 158 LSFFRSIP----RPDSFSYNTLLHA---LGVSSSLADVRAL-FDEMPVKDSVSYNVMISS 209

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           ++  G +  AR  F  +  K   SWN M+  +   G  +EA     EL ++  + DAI++
Sbjct: 210 HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEA----RELFDSRTEWDAISW 265

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
            AL+A       +EE  K F+ M         +  ++ MV    + G + EA       P
Sbjct: 266 NALMAGYVQRSQIEEAQKMFNKMPQR-----DVVSWNTMVSGYARRGDMAEARRLFDVAP 320

Query: 868 FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP-CNSANYNLMMNLLAMSNRWEDVE 926
            + D   W A++     +G LE A    +R+F   P  N+ ++N MM         E+ +
Sbjct: 321 IR-DVFTWTAIVSGYAQNGMLEEA----KRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAK 375

Query: 927 RLRHSMDEVGVKSVLVWS 944
            L    D +  ++V  W+
Sbjct: 376 EL---FDAMPCRNVASWN 390


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Vitis vinifera]
          Length = 677

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/647 (38%), Positives = 370/647 (57%), Gaps = 20/647 (3%)

Query: 437  LISMYSRNNKLELATRVFDSMKDHNLSS----WNSMISSYTGLGYVDVAWSLFNKMNSSR 492
             I +   +N L    ++   +  HNL S       +ISS   L  +D A S+F   +   
Sbjct: 43   FIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD--- 99

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
              P++  +N L+ G   +  ++  ++    M  L  RP+  ++  VL++V  L  +  GR
Sbjct: 100  -HPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGR 158

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN----IVAWNSLISGY 608
              HG +++ GL++D +V  SL+DMYVK   L    ++FD    RN    I+ WN LI+G 
Sbjct: 159  CLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGC 218

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
            C  G    A  +   M E        SWNSL++G+   G    A  +   M       NV
Sbjct: 219  CKVGDLSKAASLFEAMPERNAG----SWNSLINGFVRNGDLDRARELFVQMPEK----NV 270

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            V+WT++I+G  QN ++ ++L  F +M +E ++PN  T+ S L  C  +G LQ G+ IH  
Sbjct: 271  VSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNY 330

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
               NGF  +  + T L+DMY+K GN+KSA  VF ++  K L +W+ MI G+AI+G   +A
Sbjct: 331  LSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQA 390

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +  F ++   G  PD + F A+L AC +SG V++G  +F+SM  DY+I PT++HY+ +VD
Sbjct: 391  LQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVD 450

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG LDEA  FI++MP  PD  IWGAL  +CR H ++E AE+ + +L +LEP +  +
Sbjct: 451  LLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGS 510

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y  + N+ A   RWEDVER+R  M   GV+    WS+I+++  VH F A    H    EI
Sbjct: 511  YVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEI 570

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
              +L  + +  K+ GY+P+T  V  +I+EEEK   L SH+EKLA+ +GL+ T   + IR+
Sbjct: 571  SLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRI 630

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +KN RVC DCH+  KY S +  REI LRD  RFHHF++G CSC D W
Sbjct: 631  VKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 176/393 (44%), Gaps = 43/393 (10%)

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D  +  ++N +I     N ++E ++  F  M   S +    T+  +L++ A +     G+
Sbjct: 99  DHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGR 158

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD--------------------- 455
            +HG V+K  LE +  V   L+ MY +  +L    ++FD                     
Sbjct: 159 CLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGC 218

Query: 456 --------------SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
                         +M + N  SWNS+I+ +   G +D A  LF +M     + ++++W 
Sbjct: 219 CKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMP----EKNVVSWT 274

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
            +++G   +G ++  L++   M   G RPN  +V   L A T++  L+ G   H Y+  N
Sbjct: 275 TMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSN 334

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
           G   +  +GT+L+DMY K   +++A  VF   K ++++ W+ +I G+   G F  A +  
Sbjct: 335 GFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCF 394

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQ 680
            +M+   I PD V + ++++  S  G   + L     M+ +  I P +  +T ++    +
Sbjct: 395 VKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGR 454

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                E+L F   +Q   I P+     +L   C
Sbjct: 455 AGRLDEALSF---IQSMPINPDFVIWGALFCAC 484



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 1/191 (0%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +L+N + +  D++ A +LF ++ + ++ + W  +I    +N   E A+ +F  M     +
Sbjct: 244 SLINGFVRNGDLDRARELFVQMPE-KNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVR 302

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T+V  L AC K+GA   G++IH Y+  +  + N  +   L+ MY++   ++ A+RV
Sbjct: 303 PNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRV 362

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F   K  +L +W+ MI  +   G  D A   F KM S+ I PD + +  +L+     G+ 
Sbjct: 363 FVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNV 422

Query: 514 QNVLTLLRGMQ 524
              L     M+
Sbjct: 423 DQGLNFFESMR 433



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 7/229 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  ++  GD   A + F     ++   W++ +  +   G   + L   W  L  +GV 
Sbjct: 244 SLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLE-EGV- 301

Query: 292 FRSRILTIILKL--CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
            R   LT++  L  CTK+ A  +G  +H  L   GF  +  +  AL++ Y KC +++SA+
Sbjct: 302 -RPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSAS 360

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           ++F E    +D L W+ +I     +  ++ A++ F +M+ +         + +L AC+  
Sbjct: 361 RVFVETKG-KDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHS 419

Query: 410 GAFHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           G   +G        L  ++E  +     ++ +  R  +L+ A     SM
Sbjct: 420 GNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSM 468


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Vitis vinifera]
          Length = 805

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 263/795 (33%), Positives = 407/795 (51%), Gaps = 75/795 (9%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
             HA +I      D  +   L+  Y   R +E+A  +F +       LL N ++   L++ 
Sbjct: 51   THAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQ-PKGLLCNAMLCGYLQSG 109

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            ++   ++LF  M+  + +  S +    L+ACA    +  G +I    ++  +E N  V +
Sbjct: 110  RYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGS 169

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             +IS   +  K+  A RVFD M +                                    
Sbjct: 170  SMISFLVKFGKIGEAQRVFDGMPN-----------------------------------K 194

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D++ WN ++ G+   G +     L   M   G +P+  +++ ++QA   +  LK G+  H
Sbjct: 195  DVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMH 254

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            GY+L  GL  D+ V TS +DMY K   +++A+ VF  M  RN+V+WN++ISG    GL  
Sbjct: 255  GYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVG 314

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSG--------------------------------- 642
             +  + +++       DL +  SL+ G                                 
Sbjct: 315  ESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVD 374

Query: 643  -YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             YS  G  K+A  + + MK+     NV+TWT+++ G  QN +  ++L+ F QMQ+E I  
Sbjct: 375  LYSKCGSLKQATFVFNRMKDR----NVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAA 430

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            NS T  SL+ +C  LG L+ G+ IH    + GF  D    T L+DMY+K G +  A  +F
Sbjct: 431  NSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIF 490

Query: 762  -RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
               S +K +  WN MI G+ ++G+G +A+ ++H+++E G +P+  TF +LL+AC +S LV
Sbjct: 491  SHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLV 550

Query: 821  EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            E+G   F+SM  D+NI P  +HY+C+VDLL +AG  +EA   I  MPF+P   +  ALL 
Sbjct: 551  EQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLS 610

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
             CR H ++      S +L  L+  N   Y ++ N+ A + RW+ V+ +R  M   G+K  
Sbjct: 611  GCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKT 670

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
              +S ++    VH F A    HP   EIY  L  L S ++  GYVPDT CV +D+DEE K
Sbjct: 671  PGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMK 730

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
             ++L  H+E+LAI +GL+ T + + IR+ KN RVC DCHT  KY+S +  REI +RD  R
Sbjct: 731  VRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANR 790

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF  GECSC D W
Sbjct: 791  FHHFSNGECSCGDYW 805



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 181/740 (24%), Positives = 314/740 (42%), Gaps = 126/740 (17%)

Query: 167 ITNSPTSLALPPTDTLAKQAQLSCISSGF-CFLNETNKFRCLSSVKSKHAQMIKMGKIWN 225
           I N P S   P  D   +  QL  I   F   L E++K   L  VKS HAQ+I      +
Sbjct: 8   IANKPFSTCNPLKD--GQFNQLPTIIHNFLSLLRESSK--NLIWVKSTHAQIIT--NSLS 61

Query: 226 SDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
           +D  V + L+  Y +     +A   F  +F       ++ L  Y    G  +E LE++G 
Sbjct: 62  TDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQ-SGRYRETLELFGL 120

Query: 285 LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           +  + +   S   T  LK C   + + +G+E+ +S +++G + +  +  ++++F  K   
Sbjct: 121 MRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGK 180

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           +  A ++F  + + +D + WN II   ++   ++ A +LF EM  S  K    T+  ++Q
Sbjct: 181 IGEAQRVFDGMPN-KDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQ 239

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           AC  +G    GK +HGYVL   L +++ V    + MYS+   +E A  VF  M   NL S
Sbjct: 240 ACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVS 299

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           WN+MIS     G V  ++ LF+++  S    D+ T                         
Sbjct: 300 WNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTT------------------------- 334

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
                     +  +LQ  ++   L  G+  HG  +R+  + +L + T+++D+Y K   L+
Sbjct: 335 ----------IVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLK 383

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            A  VF+ MK+RN++ W +++ G    G   +A ++  QM+EE I  + V++ SLV   +
Sbjct: 384 QATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCA 443

Query: 645 IWGQSKEALVIIHHMKNSG--------------------------------IYPNVVTWT 672
             G  K    I  H+   G                                I  +VV W 
Sbjct: 444 HLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWN 503

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           S+I+G   + +  +++  + +M +E +KPN TT  SLL  C    L++ G     + L N
Sbjct: 504 SMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQG-----ISLFN 558

Query: 733 GFIKDAYVA------TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
              +D  +         L+D+ S++G  + A+ +  K                       
Sbjct: 559 SMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMP--------------------- 597

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
                        FQP      ALL+ C+    +  G +  D +     + P I  Y  +
Sbjct: 598 -------------FQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGI--YIML 642

Query: 847 VDLLGKAGYLDEAWDFIRTM 866
            ++  +A   D+  D+IR +
Sbjct: 643 SNIYAEARRWDKV-DYIRGL 661


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Vitis vinifera]
          Length = 705

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/728 (33%), Positives = 383/728 (52%), Gaps = 66/728 (9%)

Query: 379  NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            N    FRE+    A+  + T+  +++AC  +     G+ IH  V K  L+ +  VC  L+
Sbjct: 13   NCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALV 72

Query: 439  SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
             MY +  ++E A  +FD M++                                    D++
Sbjct: 73   DMYVKCREIEDARFLFDKMQER-----------------------------------DLV 97

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            TW  ++ G+   G     L L   M+  G  P+  ++  V+ A  +L  +   R    YI
Sbjct: 98   TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 157

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
             R     D+ +GT+++DMY K  C+++A+E+FD M+ +N+++W+++I+ Y + G    A 
Sbjct: 158  QRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 217

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI-------------- 664
             +   M    + PD ++  SL+   S     +   +I H +   G+              
Sbjct: 218  DLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMY 277

Query: 665  ---------------YP--NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                            P  ++VTWT +I G  +  N  ESL  F +M++E + P+   M 
Sbjct: 278  GKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMV 337

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            +++  C  LG +   + I     +  F  D  + T +IDM++K G ++SARE+F +   K
Sbjct: 338  TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 397

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             + SW+ MI  +  +G G++A+ LF  +L +G  P+ IT  +LL AC ++GLVEEG ++F
Sbjct: 398  NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 457

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
              M  DY++   ++HY+C+VDLLG+AG LDEA   I +M  + D  +WGA LG+CR H  
Sbjct: 458  SLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 517

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            +  AE A+  L +L+P N  +Y L+ N+ A + RWEDV + R  M +  +K +  W+WI+
Sbjct: 518  VVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIE 577

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +D   H FS     HP + EIY  L  L ++++ +GYVPDT  V  D+DEE K  +L SH
Sbjct: 578  VDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSH 637

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLAI +GL+ T    PIR+IKN RVC DCHT  K +S + GR I +RD  RFHHF+EG
Sbjct: 638  SEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEG 697

Query: 1068 ECSCNDCW 1075
             CSC D W
Sbjct: 698  ACSCGDYW 705



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 194/416 (46%), Gaps = 33/416 (7%)

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++ G    G Y N     R +   G RP+  ++  V++A  +L+ L+ GR  H  + + G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           LD D +V  +L+DMYVK   +++A+ +FD M+ R++V W  +I GY   G    +  +  
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY----------------- 665
           +M EE + PD V+  ++V   +  G   +A +I  +++                      
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 666 --------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
                          NV++W+++I+    +   R++L  F  M    + P+  T++SLL 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
            C  L  LQ G+ IH +  K G   D +V   L+DMY K   ++ AR +F K   + L +
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
           W  MI G+A  GN  E+++LF ++ E G  PD +    ++ AC   G + +     D + 
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
                +  I   + M+D+  K G ++ A +    M  K +   W A++ +   HG 
Sbjct: 361 RKKFQLDVILG-TAMIDMHAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYHGQ 414



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 225/493 (45%), Gaps = 68/493 (13%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +++ C  L    +G  +H  + K G D D  +  AL++ Y KCR++E A  LF ++ 
Sbjct: 33  LPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQ 92

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D + W  +I       K   ++ LF +M+          +V ++ ACAK+GA H+ +
Sbjct: 93  E-RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 151

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            I  Y+ +   + ++ +   +I MY++                                G
Sbjct: 152 IIDDYIQRKKFQLDVILGTAMIDMYAK-------------------------------CG 180

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
            V+ A  +F++M     + ++I+W+ +++ +  HG  +  L L R M S G  P+  +++
Sbjct: 181 CVESAREIFDRME----EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLA 236

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +L A ++L+ L+ GR  H  + + GLD D +V  +L+DMY K   +++A+ +FD M  R
Sbjct: 237 SLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER 296

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           ++V W  +I GY   G    +  + ++M EE + PD V+  ++V   +  G   +A  I 
Sbjct: 297 DLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTID 356

Query: 657 HHMKNSGIY-------------------------------PNVVTWTSLISGSLQNENYR 685
            +++                                     NV++W+++I+    +   R
Sbjct: 357 DYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 416

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK-DAYVATGL 744
           ++L  F  M +  I PN  T+ SLL  C   GL++ G     L  ++  ++ D    T +
Sbjct: 417 KALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV 476

Query: 745 IDMYSKSGNLKSA 757
           +D+  ++G L  A
Sbjct: 477 VDLLGRAGRLDEA 489



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 212/490 (43%), Gaps = 78/490 (15%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y++  +   A   F     R    W+  +  Y   G +  E L ++ ++  +GV+
Sbjct: 70  ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECG-KANESLVLFEKMREEGVV 128

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  ++  C KL A      +   + ++ F  DV L  A+++ Y KC  VESA ++
Sbjct: 129 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 188

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + ++ + W+ +I     + +   A+ LFR M  S       T+  +L AC+ +  
Sbjct: 189 FDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKN 247

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+ IH  V K  L+ +  VC  L+ MY +  ++E A  +FD M + +L +W  MI  
Sbjct: 248 LQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGG 307

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y   G  + +  LF+KM    + PD +                                 
Sbjct: 308 YAECGNANESLVLFDKMREEGVVPDKV--------------------------------- 334

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
            + V+VV  A  +L  +   R    YI R     D+ +GT+++DM+ K  C+++A+E+FD
Sbjct: 335 -AMVTVVF-ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 392

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
            M+ +N+++W+++I+ Y                                 GY   GQ ++
Sbjct: 393 RMEEKNVISWSAMIAAY---------------------------------GYH--GQGRK 417

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-----DIKPNSTTM 706
           AL +   M  SGI PN +T  SL+          E L+FF  M ++     D+K + T +
Sbjct: 418 ALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVK-HYTCV 476

Query: 707 SSLLQTCGGL 716
             LL   G L
Sbjct: 477 VDLLGRAGRL 486


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/811 (33%), Positives = 411/811 (50%), Gaps = 75/811 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            IL+LC +      G  VH+ +   G   +  L   L+  Y  C  +    ++F  +    
Sbjct: 457  ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDN 516

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
               LWN ++    +   +  +I LF++MQ       S T   +L+  A +G   E K+IH
Sbjct: 517  KVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIH 576

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G V K    S  +V N LI+ Y ++                               G VD
Sbjct: 577  GCVYKLGFGSYNTVVNSLIATYFKS-------------------------------GEVD 605

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A  LF+++       D+++WN ++SG   +G   + L     M  L    + +++   +
Sbjct: 606  SAHKLFDELGDR----DVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSV 661

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A   +  L  GR  HG  ++     ++    +L+DMY K   L +A + F+ M  + +V
Sbjct: 662  AACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVV 721

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------------------- 636
            +W SLI+ Y  +GL+ +A ++  +ME + + PD+ S                        
Sbjct: 722  SWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYI 781

Query: 637  ------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                        N+L+  Y+  G  +EA ++   +       ++V+W ++I G  +N   
Sbjct: 782  RKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIP----VKDIVSWNTMIGGYSKNSLP 837

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+LK F +MQ+E  +P+  TM+ LL  CG L  L+ G+ IH   L+NG+  + +VA  L
Sbjct: 838  NEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANAL 896

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            IDMY K G+L  AR +F     K L +W  MI G  ++G G EAI  F ++   G +PD 
Sbjct: 897  IDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDE 956

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            ITFT++L AC +SGL+ EGW +F+SM ++ N+ P +EHY+CMVDLL + G L +A++ I 
Sbjct: 957  ITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIE 1016

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            TMP KPDATIWGALL  CRIH  +E AE  +  +F+LEP N+  Y L+ N+ A + +WE+
Sbjct: 1017 TMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEE 1076

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V++LR  + + G+K     SWI++      F +    HP    I+  L +L  +MK  G+
Sbjct: 1077 VKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGH 1136

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             P  R    +  + EK   L  H+EKLA+ +G++   S   IRV KN RVC DCH  AK+
Sbjct: 1137 SPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKF 1196

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            MS    REI LRD  RFHHF++G CSC D W
Sbjct: 1197 MSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227



 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 163/647 (25%), Positives = 275/647 (42%), Gaps = 85/647 (13%)

Query: 205  RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYA-DWSS 263
            +CL   K  H+ +I    I     +   L+F Y+  G      + F    S +    W+ 
Sbjct: 465  KCLQEGKMVHS-VISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNL 523

Query: 264  FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
             + +Y   G + +E + ++ ++   G+   S   + ILK    L        +H  + K 
Sbjct: 524  MMSEYAKIG-DYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKL 582

Query: 324  GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
            GF     +  +L+  Y K  +V+SA+KLF E+ D  D + WN +I   + N    +A++ 
Sbjct: 583  GFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGD-RDVVSWNSMISGCVMNGFSHSALEF 641

Query: 384  FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
            F +M          T+V  + ACA VG+   G+ +HG  +K+     +   N L+ MYS+
Sbjct: 642  FVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSK 701

Query: 444  NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
               L  A + F+ M    + SW S+I++Y   G  D A  LF +M S  + PD+      
Sbjct: 702  CGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVY----- 756

Query: 504  LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
                                          S++ VL A      L  GR+ H YI +N +
Sbjct: 757  ------------------------------SMTSVLHACACGNSLDKGRDVHNYIRKNNM 786

Query: 564  DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
               L V  +LMDMY K   ++ A  VF  +  ++IV+WN++I GY    L   A K+  +
Sbjct: 787  ALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAE 846

Query: 624  MEEEEIKPDLVSWNSLV---------------------SGYSIWGQSKEALV-------- 654
            M++E  +PD ++   L+                     +GYS       AL+        
Sbjct: 847  MQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGS 905

Query: 655  IIHHMKNSGIYP--NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
            ++H      + P  +++TWT +ISG   +    E++  F +M+   IKP+  T +S+L  
Sbjct: 906  LVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYA 965

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL------IDMYSKSGNLKSAREVFRKSAN 766
            C   GLL  G         N  I +  +   L      +D+ +++GNL  A  +      
Sbjct: 966  CSHSGLLNEGWGFF-----NSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPI 1020

Query: 767  KTLAS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            K  A+ W  ++ G  I+ + + A  +   + E   +PD   +  LLA
Sbjct: 1021 KPDATIWGALLCGCRIHHDVELAEKVAEHVFE--LEPDNAGYYVLLA 1065



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 231/541 (42%), Gaps = 74/541 (13%)

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
           NA++L R  Q S     + +   +LQ CA+     EGK +H  +  + +     +   L+
Sbjct: 436 NAVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLV 493

Query: 439 SMYSRNNKLELATRVFDS-MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
            MY     L    R+FD  + D+ +  WN M+S Y  +                      
Sbjct: 494 FMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKI---------------------- 531

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                        G Y+  + L + MQ LG   N  + S +L+    L  +   +  HG 
Sbjct: 532 -------------GDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGC 578

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           + + G      V  SL+  Y K+  + +A ++FD + +R++V+WNS+ISG    G   +A
Sbjct: 579 VYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSA 638

Query: 618 KKMLNQMEEEEIKPDLVSW----------NSLVSGYSIWGQSKEALVIIHHMKNSGIY-- 665
            +   QM    +  DL +            SL  G ++ GQ  +A      M N+ +   
Sbjct: 639 LEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDM 698

Query: 666 -------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
                                VV+WTSLI+  ++   Y ++++ F +M+ + + P+  +M
Sbjct: 699 YSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSM 758

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           +S+L  C     L  G+++H    KN       V+  L+DMY+K G+++ A  VF +   
Sbjct: 759 TSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPV 818

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
           K + SWN MI G++      EA+ LF E+ +   +PD IT   LL AC +   +E G   
Sbjct: 819 KDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGI 877

Query: 827 FDS-MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
               +   Y+    +   + ++D+  K G L  A      +P K D   W  ++  C +H
Sbjct: 878 HGCILRNGYS--SELHVANALIDMYVKCGSLVHARLLFDMIPEK-DLITWTVMISGCGMH 934

Query: 886 G 886
           G
Sbjct: 935 G 935



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 224/527 (42%), Gaps = 49/527 (9%)

Query: 188  LSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAA 247
             SCI   F  L    +       K  H  + K+G   + + +V SLI  Y + G+  SA 
Sbjct: 556  FSCILKCFATLGRVGE------CKRIHGCVYKLG-FGSYNTVVNSLIATYFKSGEVDSAH 608

Query: 248  KAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL 307
            K F     R    W+S +       G     LE + ++    V      L   +  C  +
Sbjct: 609  KLFDELGDRDVVSWNSMISGC-VMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANV 667

Query: 308  MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
             +  LG  +H   +K  F  +V     L++ Y KC ++  A + F ++   +  + W  +
Sbjct: 668  GSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQ-KTVVSWTSL 726

Query: 368  IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
            I   +R   +++AI+LF EM+         ++  +L ACA   +  +G+ +H Y+ K+ +
Sbjct: 727  IAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNM 786

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
               L V N L+ MY++   +E A  VF  +                              
Sbjct: 787  ALCLPVSNALMDMYAKCGSMEEAYLVFSQIP----------------------------- 817

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
                    DI++WN ++ G+  +      L L   MQ    RP+G +++ +L A   L  
Sbjct: 818  ------VKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAA 870

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L+ GR  HG ILRNG   +L+V  +L+DMYVK   L +A+ +FD +  ++++ W  +ISG
Sbjct: 871  LEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISG 930

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYP 666
                GL   A     +M    IKPD +++ S++   S  G   E     + M     + P
Sbjct: 931  CGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEP 990

Query: 667  NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +  +  ++    +  N  ++      M    IKP++T   +LL  C
Sbjct: 991  KLEHYACMVDLLARTGNLSKAYNLIETMP---IKPDATIWGALLCGC 1034


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 818

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/814 (31%), Positives = 440/814 (54%), Gaps = 82/814 (10%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL-KCALMNFYGKCRDVESANKLFSEVS 356
             ++L+ CT     +   ++   +IK GF ++ HL +  +++ + K      A ++F  V 
Sbjct: 51   VVLLENCTSKKELY---QILPFIIKNGF-YNEHLFQTKVISLFCKFGSNSEAARVFEHV- 105

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            +L+ D+L++ ++    +N    +A+  F  M     + +      +LQ C +     +G+
Sbjct: 106  ELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGR 165

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +IHG ++ +  ESNL V   ++S+Y++  +                              
Sbjct: 166  EIHGLIITNGFESNLFVMTAVMSLYAKCRQ------------------------------ 195

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             +D A+ +F +M       D+++W  L++G+  +G  +  L L+  MQ  G +P+  ++ 
Sbjct: 196  -IDNAYKMFERMQ----HKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLV 250

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             +L AV +++ L+ GR  HGY  R+G +  + V  +L+DMY K    + A+ VF  M+++
Sbjct: 251  SILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSK 310

Query: 597  NIVAWNSLISGYCFKG----LFVNAKKMLNQ----------------------------- 623
             +V+WN++I G    G     F    KML++                             
Sbjct: 311  TVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVH 370

Query: 624  --MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
              +++ ++  ++   NSL+S YS   +   A  I ++++ +      VTW ++I G  QN
Sbjct: 371  KLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-----VTWNAMILGYAQN 425

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
               +E+L  F  MQ + IK +  T+  ++       + +  K IH L ++     + +V+
Sbjct: 426  GCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVS 485

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            T L+DMY+K G +K+AR++F     + + +WN MI G+  +G GKE + LF+E+ +   +
Sbjct: 486  TALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVK 545

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+ ITF ++++AC +SG VEEG   F SM  DY + PT++HYS MVDLLG+AG LD+AW+
Sbjct: 546  PNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWN 605

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            FI+ MP KP  ++ GA+LG+C+IH ++E  E A+++LFKL+P     + L+ N+ A ++ 
Sbjct: 606  FIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSM 665

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            W+ V ++R +M++ G+      SW+++   +H F +    HP + +IY  L  L  E+K 
Sbjct: 666  WDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKA 725

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
             GYVPD   ++ D++E+ K ++L SH+E+LAI +GL+ T     + + KN RVC DCH  
Sbjct: 726  AGYVPDPDSIH-DVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDT 784

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KY+SLV GREI +RD  RFHHF+ G CSC D W
Sbjct: 785  TKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 225/478 (47%), Gaps = 42/478 (8%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y +     +A K F     +    W++ +  Y    G  +  L++  ++   G    S  
Sbjct: 190 YAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQ-NGHAKRALQLVLQMQEAGQKPDSVT 248

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  IL     + A  +G  +H    + GF+  V++  AL++ Y KC     A  +F  + 
Sbjct: 249 LVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMR 308

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             +  + WN +I    +N + E A   F +M          T++ +L ACA +G    G 
Sbjct: 309 S-KTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW 367

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H  + K  L+SN+SV N LISMYS+  ++++A  +F++++  N+ +WN+MI  Y   G
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNG 426

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
            V  A +LF  M S  I+ D  T    L G                              
Sbjct: 427 CVKEALNLFCMMQSQGIKLDCFT----LVG------------------------------ 452

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            V+ A+ +  + +  +  HG  +R  +D +++V T+L+DMY K   ++ A+++FD M+ R
Sbjct: 453 -VITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQER 511

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           +++ WN++I GY   G+      + N+M++  +KP+ +++ S++S  S  G  +E L++ 
Sbjct: 512 HVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLF 571

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             M+    + P +  +++++    +     ++  F   +Q+  IKP  + + ++L  C
Sbjct: 572 KSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNF---IQEMPIKPGISVLGAMLGAC 626



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 145/297 (48%), Gaps = 3/297 (1%)

Query: 228 DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           ++  +L+  Y + G    A   F    S++   W++ + D  +  GE +E    + ++  
Sbjct: 282 NVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMI-DGCAQNGESEEAFATFLKMLD 340

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +G +     +  +L  C  L     G  VH  L K   D +V +  +L++ Y KC+ V+ 
Sbjct: 341 EGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDI 400

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  +F+ +   + ++ WN +I+   +N   + A+ LF  MQ    K    T+V ++ A A
Sbjct: 401 AASIFNNLE--KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALA 458

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
                 + K IHG  +++ +++N+ V   L+ MY++   ++ A ++FD M++ ++ +WN+
Sbjct: 459 DFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNA 518

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           MI  Y   G       LFN+M    ++P+ IT+  ++S     G  +  L L + MQ
Sbjct: 519 MIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQ 575


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 810

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/817 (33%), Positives = 414/817 (50%), Gaps = 84/817 (10%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            ++K CT  +   LG  +H  +IK G   DV +  AL+  YGK   V++A K+F  +  + 
Sbjct: 37   VIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMP-VR 95

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR--TIVKMLQACAKVGAFHEGKQ 417
            + + WN II     N   ++   +  EM       +    T+V +L  CA+      G +
Sbjct: 96   NLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIR 155

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            IHG  +K  L  ++ V N L+ MYS+                                GY
Sbjct: 156  IHGLAVKLGLSEDVRVNNSLVDMYSK-------------------------------CGY 184

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVS 536
            +  A  LF+K N    + + ++WN ++ G  T G       L R MQ       N  +V 
Sbjct: 185  LTEAQMLFDKNN----RKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVL 240

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             +L A  E+  L+  +E HGY +R+G  YD  V    +  Y K   L  A+ VF +M+ +
Sbjct: 241  NILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK 300

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLN---QMEEEEIKPDLVSWNSLV------------- 640
             + +WN+LI G    G   + +K LN   QM    + PD  +  SL+             
Sbjct: 301  TVNSWNALIGGCAQNG---DPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGK 357

Query: 641  ----------------------SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                                  S Y   G+S  A ++   M+      + V+W ++ISG 
Sbjct: 358  EVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEK----SSVSWNAMISGY 413

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
             QN    ++L  F ++  +  +P+   + S+L  C     L+ GKE HC  LK   ++D 
Sbjct: 414  SQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDV 473

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            +VA   IDMY+KSG +K +R VF    NK LASWN +I  + ++G+G+E+I LF  + + 
Sbjct: 474  FVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKV 533

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            G  PD  TF  +L  C ++GLVEEG KYF+ M   + I P +EHY+C++D+LG+AG LD+
Sbjct: 534  GQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDD 593

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A   +  MP +PD+ +W +LL  CR  G LE  +I + +L +LEP N  NY  + NL A 
Sbjct: 594  ALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAG 653

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
            S RW+DV R+R  + ++G++     SWI++   VH F A     P + E+      L  +
Sbjct: 654  SGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKK 713

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            M K+GY P+T  V  D+DEE+K + L  H+EKLAI +GL+ T     +R+ KN R+C DC
Sbjct: 714  MCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDC 773

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H A+K+MS V GREI +RD  RFHHF++G CSC D W
Sbjct: 774  HNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 154/324 (47%), Gaps = 42/324 (12%)

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
           F  +  +   V++A T       G   HG +++ GL  D++VG +L+ MY K   +  A 
Sbjct: 27  FNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAV 86

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEIKPDLVSW--------- 636
           +VF  M  RN+V+WNS+ISG+   G   +   ML +M   EE + PD+ +          
Sbjct: 87  KVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAR 146

Query: 637 --------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                                     NSLV  YS  G   EA ++    KN+    N V+
Sbjct: 147 EVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD--KNN--RKNAVS 202

Query: 671 WTSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           W ++I G        E+   F +MQ QEDI+ N  T+ ++L  C  +  L++ KE+H   
Sbjct: 203 WNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYS 262

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
           +++GF  D  VA G +  Y+K G L  A  VF     KT+ SWN +I G A  G+ ++A+
Sbjct: 263 IRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKAL 322

Query: 790 LLFHELLETGFQPDAITFTALLAA 813
            L+ ++  +G  PD  T  +LL A
Sbjct: 323 NLYIQMTYSGLVPDWFTIGSLLLA 346



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 214/460 (46%), Gaps = 24/460 (5%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L S+K  H   I+ G  +  D++V +  +  Y + G    A + F+   +++   W++ +
Sbjct: 252 LRSLKELHGYSIRHG--FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALI 309

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
                  G+ ++ L ++ ++   G++     +  +L     L +   G EVH  +++ G 
Sbjct: 310 GGCAQ-NGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGL 368

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           + D  +  +L++ Y  C +  SA  LF  + + +  + WN +I    +N   E+A+ LFR
Sbjct: 369 EIDSFIGISLLSLYIHCGESSSARLLFDGMEE-KSSVSWNAMISGYSQNGLPEDALILFR 427

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           ++     +     +V +L AC++  A   GK+ H Y LK+ L  ++ V    I MY+++ 
Sbjct: 428 KLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSG 487

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            ++ +  VFD +K+ +L+SWN++I++Y   G  + +  LF +M      PD  T+  +L+
Sbjct: 488 CIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILT 547

Query: 506 GHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL- 563
                G  +  L     MQ+  G  P     + V+       L + GR      L + + 
Sbjct: 548 VCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDM-----LGRAGRLDDALRLVHEMP 602

Query: 564 -DYDLYVGTSLMDMYVKNDCLQNAQEVFD---NMKNRNIVAWNSLISGYCFKGLFVNAKK 619
              D  V +SL+        L+  Q V +    ++ +N+  + SL + Y   G + + ++
Sbjct: 603 EQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRR 662

Query: 620 MLNQMEEEEIKPDL-VSW-------NSLVSGYSIWGQSKE 651
           +   +++  ++ D   SW       +S V+G ++  QSKE
Sbjct: 663 VRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKE 702



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 5/212 (2%)

Query: 680 QNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
           +NE Y +++  F+++  + +   ++ T   +++ C G      G+ IH + +K G + D 
Sbjct: 7   RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-- 796
           +V   LI MY K G + +A +VF     + L SWN +I GF+  G  K+   +  E++  
Sbjct: 67  FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
           E G  PD  T   +L  C     V+ G +    ++    +   +   + +VD+  K GYL
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIR-IHGLAVKLGLSEDVRVNNSLVDMYSKCGYL 185

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            EA   +     + +A  W  ++G     G++
Sbjct: 186 TEA-QMLFDKNNRKNAVSWNTMIGGLCTKGYI 216


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Vitis vinifera]
          Length = 881

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 270/818 (33%), Positives = 410/818 (50%), Gaps = 79/818 (9%)

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            L  ++K C  L+   LG  +H    K     DV +  AL+  YGKC  VE A K+F  + 
Sbjct: 104  LPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP 163

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR--TIVKMLQACAKVGAFHE 414
            +  + + WN II     N   + +   FREM       +    T+V +L  CA      +
Sbjct: 164  E-RNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEK 222

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            G  +HG  +K  L   L V N LI MYS+                               
Sbjct: 223  GMAVHGLAVKLGLNEELMVNNSLIDMYSKCR----------------------------- 253

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
              ++  A  LF+K +    + +I++WN ++ G+           LL+ MQ+   +     
Sbjct: 254  --FLSEAQLLFDKND----KKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADE 307

Query: 535  VSV--VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             ++  VL    E   L+  +E HGY  R+GL  +  V  + +  Y +   L +++ VFD 
Sbjct: 308  FTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDL 367

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV------------ 640
            M  + + +WN+L+ GY        A  +  QM +  + PD  +  SL+            
Sbjct: 368  MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 427

Query: 641  -----------------------SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                                   S Y   G+   A V+   M+    + ++V+W  +I+G
Sbjct: 428  EEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGME----HRSLVSWNVMIAG 483

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              QN    E++  F QM  + I+P    +  +   C  L  L+ GKE+HC  LK    +D
Sbjct: 484  YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTED 543

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             +V++ +IDMY+K G +  ++ +F +   K +ASWN +I G+ I+G GKEA+ LF ++L 
Sbjct: 544  IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLR 603

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G +PD  TFT +L AC ++GLVE+G +YF+ M   +NI P +EHY+C+VD+LG+AG +D
Sbjct: 604  LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRID 663

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            +A   I  MP  PD+ IW +LL SCRIHG+L   E  + +L +LEP    NY L+ NL A
Sbjct: 664  DALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 723

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             S +W+DV R+R  M ++G++     SWI++   VH F       P   E+      L  
Sbjct: 724  GSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEV 783

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            ++  +GY PDT  V  D++EE+K  +L  H+EKLAI +GL+ T    P+RV KN R+C D
Sbjct: 784  KISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGD 843

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH AAK++S V  R+I +RD  RFHHFR+G CSC D W
Sbjct: 844  CHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 161/614 (26%), Positives = 268/614 (43%), Gaps = 87/614 (14%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H    KM  +  SD  V  +LI  Y + G    A K F     R+   W+S +  + S  
Sbjct: 124 HGMATKMDLV--SDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGF-SEN 180

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
           G +QE    + E+      F   + T++  L +C        G+ VH   +K G + ++ 
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELM 240

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  +L++ Y KCR +  A  LF + +D ++ + WN +I    R E       L ++MQ  
Sbjct: 241 VNNSLIDMYSKCRFLSEAQLLFDK-NDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTE 299

Query: 391 SAK--AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            AK  A   TI+ +L  C +       K++HGY  +  L+SN  V N  I+ Y+R   L 
Sbjct: 300 DAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALC 359

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            + RVFD M    +SSWN+++  Y        A  L+ +M  S + PD   W       F
Sbjct: 360 SSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPD---W-------F 409

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
           T GS                         +L A + ++ L YG E HG+ LRNGL  D +
Sbjct: 410 TIGS-------------------------LLLACSRMKSLHYGEEIHGFALRNGLAVDPF 444

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           +G SL+ +Y+       AQ +FD M++R++V+WN +I+GY   GL   A  +  QM  + 
Sbjct: 445 IGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG 504

Query: 629 IKP-----------------------------------DLVSWNSLVSGYSIWGQSKEAL 653
           I+P                                   D+   +S++  Y+  G    + 
Sbjct: 505 IQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQ 564

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            I   ++      +V +W  +I+G   +   +E+L+ F +M +  +KP+  T + +L  C
Sbjct: 565 RIFDRLREK----DVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMAC 620

Query: 714 GGLGLLQNGKEI--HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLA 770
              GL+++G E     L L N   K  +  T ++DM  ++G +  A R +     +    
Sbjct: 621 SHAGLVEDGLEYFNQMLNLHNIEPKLEHY-TCVVDMLGRAGRIDDALRLIEEMPGDPDSR 679

Query: 771 SWNCMIMGFAIYGN 784
            W+ ++    I+GN
Sbjct: 680 IWSSLLSSCRIHGN 693



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 202/454 (44%), Gaps = 80/454 (17%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC-LISMYSRNNKLELATRVFDSMKDH 460
           +LQAC +      G+++H  V  S    N  V N  +I+MYS       +  VFD ++  
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNS-SRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
           NL  WN+++S+YT     + A S+F+++ S +  +PD  T  C                 
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPC----------------- 106

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
                             V++A   L  L  G+  HG   +  L  D++VG +L+ MY K
Sbjct: 107 ------------------VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 148

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEIKPDLVSW- 636
              ++ A +VF++M  RN+V+WNS+I G+   G    +     +M   EE   PD+ +  
Sbjct: 149 CGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLV 208

Query: 637 ----------------------------------NSLVSGYSIWGQSKEALVIIHHMKNS 662
                                             NSL+  YS      EA ++    KN 
Sbjct: 209 TVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFD--KND 266

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNSTTMSSLLQTCGGLGLLQ 720
               N+V+W S+I G  + E+   +     +MQ ED  +K +  T+ ++L  C     LQ
Sbjct: 267 --KKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQ 324

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
           + KE+H    ++G   +  VA   I  Y++ G L S+  VF     KT++SWN ++ G+A
Sbjct: 325 SLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYA 384

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
              + ++A+ L+ ++ ++G  PD  T  +LL AC
Sbjct: 385 QNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/480 (22%), Positives = 217/480 (45%), Gaps = 47/480 (9%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L S+K  H    + G + +++ +  + I  Y   G   S+ + F L  +++ + W++ L 
Sbjct: 323 LQSLKELHGYSWRHG-LQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLC 381

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y     + ++ L+++ ++   G+      +  +L  C+++ +   G E+H   ++ G  
Sbjct: 382 GYAQ-NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLA 440

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D  +  +L++ Y  C    +A  LF  +      + WN +I    +N   + AI LFR+
Sbjct: 441 VDPFIGISLLSLYICCGKPFAAQVLFDGMEH-RSLVSWNVMIAGYSQNGLPDEAINLFRQ 499

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M     +     I+ +  AC+++ A   GK++H + LK+ L  ++ V + +I MY++   
Sbjct: 500 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 559

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           + L+ R+FD +++ +++SWN +I+ Y   G    A  LF KM                  
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM------------------ 601

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR-NGLDY 565
                        LR    LG +P+  + + +L A +   L++ G E    +L  + ++ 
Sbjct: 602 -------------LR----LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEP 644

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQ- 623
            L   T ++DM  +   + +A  + + M  + +   W+SL+S     G     +K+ N+ 
Sbjct: 645 KLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKL 704

Query: 624 MEEEEIKPD-LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV-VTWTSLISGSLQN 681
           +E E  KP+  V  ++L +G   W   +    +   MK+ G+  +   +W   + G + N
Sbjct: 705 LELEPEKPENYVLISNLFAGSGKWDDVRR---VRGRMKDIGLQKDAGCSWIE-VGGKVHN 760



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 9/252 (3%)

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           D V    +++ YS+ G   ++ ++   ++      N+  W +++S   +NE + +++  F
Sbjct: 33  DFVLNTRIITMYSMCGSPSDSRMVFDKLRRK----NLFQWNAIVSAYTRNELFEDAMSIF 88

Query: 692 IQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            ++    + KP++ T+  +++ C GL  L  G+ IH +  K   + D +V   LI MY K
Sbjct: 89  SELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 148

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL--ETGFQPDAITFT 808
            G ++ A +VF     + L SWN +I GF+  G  +E+   F E+L  E  F PD  T  
Sbjct: 149 CGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLV 208

Query: 809 ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            +L  C     +E+G      ++    +   +   + ++D+  K  +L EA   +     
Sbjct: 209 TVLPVCAGEEDIEKGMAVH-GLAVKLGLNEELMVNNSLIDMYSKCRFLSEA-QLLFDKND 266

Query: 869 KPDATIWGALLG 880
           K +   W +++G
Sbjct: 267 KKNIVSWNSMIG 278



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 6/225 (2%)

Query: 706 MSSLLQTCGGLGLLQNGKEIH-CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           M  LLQ CG    ++ G+ +H  +     F  D  + T +I MYS  G+   +R VF K 
Sbjct: 1   MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEG 823
             K L  WN ++  +      ++A+ +F EL+  T  +PD  T   ++ AC  +GL++ G
Sbjct: 61  RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLG 118

Query: 824 W-KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
             +    M+T  +++  +   + ++ + GK G ++EA      MP + +   W +++   
Sbjct: 119 LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSIICGF 177

Query: 883 RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
             +G L+ +  A R +   E     +   ++ +L +    ED+E+
Sbjct: 178 SENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEK 222


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Glycine max]
          Length = 741

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/746 (33%), Positives = 388/746 (52%), Gaps = 71/746 (9%)

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            HL   L+       D   A +LF  +   +       I     R    E AI+L+  ++ 
Sbjct: 67   HLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNE-AIRLYASLRA 125

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               K  +   + + +AC   G     K++H   ++  + S+  + N LI  Y +   +E 
Sbjct: 126  RGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEG 185

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A RVFD +   ++ SW SM S Y   G   +  ++F +M           WN        
Sbjct: 186  ARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMG----------WN-------- 227

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                             G +PN  ++S +L A +EL+ LK GR  HG+ +R+G+  +++V
Sbjct: 228  -----------------GVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFV 270

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             ++L+ +Y +   ++ A+ VFD M +R                                 
Sbjct: 271  CSALVSLYARCLSVKQARLVFDLMPHR--------------------------------- 297

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
              D+VSWN +++ Y    +  + L +   M + G+  +  TW ++I G ++N    ++++
Sbjct: 298  --DVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVE 355

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
               +MQ    KPN  T+SS L  C  L  L+ GKE+HC   ++  I D    T L+ MY+
Sbjct: 356  MLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYA 415

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G+L  +R VF     K + +WN MI+  A++GNG+E +LLF  +L++G +P+++TFT 
Sbjct: 416  KCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTG 475

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L+ C +S LVEEG + F+SM  D+ + P   HY+CMVD+  +AG L EA++FI+ MP +
Sbjct: 476  VLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPME 535

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            P A+ WGALLG+CR++ ++E A+I++ +LF++EP N  NY  + N+L  +  W +    R
Sbjct: 536  PTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEAR 595

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              M E G+      SW+Q+   VH F      +  + +IY  L  L  +MK  GY PDT 
Sbjct: 596  ILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTD 655

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V QDID+EEK + L SH+EKLA+ +G++    ++ IRV KN R+C DCH A KY+S V 
Sbjct: 656  YVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVV 715

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
            G  I +RD  RFHHFR G CSC D W
Sbjct: 716  GVTIIVRDSLRFHHFRNGNCSCQDLW 741



 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 237/477 (49%), Gaps = 6/477 (1%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           L  GDF  A + F           S+ +  + + G    E + ++  L  +G+   + + 
Sbjct: 77  LNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLP-NEAIRLYASLRARGIKPHNSVF 135

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
             + K C          EVH   I+ G   D  L  AL++ YGKC+ VE A ++F ++  
Sbjct: 136 LTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLV- 194

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
           ++D + W  +    +        + +F EM ++  K  S T+  +L AC+++     G+ 
Sbjct: 195 VKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRA 254

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IHG+ ++  +  N+ VC+ L+S+Y+R   ++ A  VFD M   ++ SWN ++++Y     
Sbjct: 255 IHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNRE 314

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            D   +LF++M+S  ++ D  TWN ++ G   +G  +  + +LR MQ+LGF+PN  ++S 
Sbjct: 315 YDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISS 374

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            L A + L  L+ G+E H Y+ R+ L  DL   T+L+ MY K   L  ++ VFD +  ++
Sbjct: 375 FLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKD 434

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           +VAWN++I      G       +   M +  IKP+ V++  ++SG S     +E L I +
Sbjct: 435 VVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFN 494

Query: 658 HM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            M ++  + P+   +  ++    +     E+ +F  +M  E   P ++   +LL  C
Sbjct: 495 SMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPME---PTASAWGALLGAC 548


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 267/852 (31%), Positives = 426/852 (50%), Gaps = 107/852 (12%)

Query: 261  WSSFLEDY--ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
            WS+ +  Y     GG     L  + E+H  GV       + +LK C+ +    +G +VH 
Sbjct: 125  WSALISGYAQNGLGGGA---LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181

Query: 319  SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
             ++  GF+ DV +   L+  Y KC +   + +LF E+ +  + + WN +    ++ +   
Sbjct: 182  VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE-RNVVSWNALFSCYVQXDFCG 240

Query: 379  NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
             A+ LF EM  S  K    ++  M+ AC  +     GK IHGY++K   + +    N L+
Sbjct: 241  EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300

Query: 439  SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
             MY++                               +G +  A S+F K+     QPDI+
Sbjct: 301  DMYAK-------------------------------VGDLADAISVFEKIK----QPDIV 325

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            +WN +++G   H  ++  L LL  M+                           R+ H  +
Sbjct: 326  SWNAVIAGCVLHEHHEQALELLGQMK---------------------------RQLHSSL 358

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            ++  ++ DL+V   L+DMY K D L++A+  F+ +  ++++AWN++ISGY      + A 
Sbjct: 359  MKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEAL 418

Query: 619  KMLNQMEEEEI-----------------------------------KPDLVSWNSLVSGY 643
             +  +M +E I                                     D+   NSL+  Y
Sbjct: 419  SLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSY 478

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                  ++A  I           ++V++TS+I+   Q     E+LK F++MQ  ++KP+ 
Sbjct: 479  GKCSHVEDAERIFEECT----IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 534

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
               SSLL  C  L   + GK++H   LK GF+ D +    L++MY+K G++  A   F +
Sbjct: 535  FVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 594

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               + + SW+ MI G A +G+G++A+ LF+++L+ G  P+ IT  ++L AC ++GLV E 
Sbjct: 595  LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEA 654

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
              YF+SM   +   P  EHY+CM+DLLG+AG ++EA + +  MPF+ +A++WGALLG+ R
Sbjct: 655  KLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAAR 714

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            IH  +E    A+  LF LEP  S  + L+ N+ A + +WE+V  +R  M +  VK     
Sbjct: 715  IHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGM 774

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            SWI++   V+ F      H  + EIY +L  L   M K GYVP       D+++ EK  +
Sbjct: 775  SWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELL 834

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLA+ +GL+ T   APIRV KN RVC DCHTA KY+  +  REI +RD  RFHH
Sbjct: 835  LYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHH 894

Query: 1064 FREGECSCNDCW 1075
            F++G CSC D W
Sbjct: 895  FKDGSCSCGDYW 906



 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 175/597 (29%), Positives = 291/597 (48%), Gaps = 52/597 (8%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  C    +   G+++HA + K G   D  ++  L+N Y KCR    A KL  E S  E
Sbjct: 62  LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESS--E 119

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            DL+ W+ +I    +N     A+  F EM     K    T   +L+AC+ V     GKQ+
Sbjct: 120 PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV 179

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           HG V+ S  E ++ V N L+ MY++ ++   + R+FD + + N+ SWN++ S Y    + 
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFC 239

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
             A  LF                           Y+ VL+        G +PN  S+S +
Sbjct: 240 GEAVGLF---------------------------YEMVLS--------GIKPNEFSLSSM 264

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           + A T LR    G+  HGY+++ G D+D +   +L+DMY K   L +A  VF+ +K  +I
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDI 324

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEE--------EIKPDLVSWNSLVSGYSIWGQSK 650
           V+WN++I+G         A ++L QM+ +        +++ DL     LV  YS     +
Sbjct: 325 VSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 384

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           +A +  + +       +++ W ++ISG  Q     E+L  F++M +E I  N TT+S++L
Sbjct: 385 DARMAFNLLPEK----DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTIL 440

Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
           ++  GL ++   +++H L +K+GF  D YV   LID Y K  +++ A  +F +     L 
Sbjct: 441 KSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLV 500

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
           S+  MI  +A YG G+EA+ LF E+ +   +PD    ++LL AC N    E+G K     
Sbjct: 501 SFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG-KQLHVH 559

Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
              Y  +  I   + +V++  K G +D+A      +  +   + W A++G    HGH
Sbjct: 560 ILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGGLAQHGH 615



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 126/555 (22%), Positives = 227/555 (40%), Gaps = 144/555 (25%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           K+L  C    +   G QIH ++ KS L  + S+ N LI++YS+      A ++ D   + 
Sbjct: 61  KLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEP 120

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           +L SW+++IS Y   G    A   F++M+                               
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMH------------------------------- 149

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
                LG + N  + S VL+A + ++ L+ G++ HG ++ +G + D++V  +L+ MY K 
Sbjct: 150 ----LLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--------- 631
           D   +++ +FD +  RN+V+WN+L S Y        A  +  +M    IKP         
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265

Query: 632 --------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
                                     D  S N+LV  Y+  G   +A+ +   +K     
Sbjct: 266 NACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ---- 321

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P++V+W ++I+G + +E++ ++L+   QM+                           +++
Sbjct: 322 PDIVSWNAVIAGCVLHEHHEQALELLGQMK---------------------------RQL 354

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
           H   +K     D +V+ GL+DMYSK   L+ AR  F     K L +WN +I G++ Y   
Sbjct: 355 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 414

Query: 786 KEAILLFHEL-----------------------------------LETGFQPDAITFTAL 810
            EA+ LF E+                                   +++GF  D     +L
Sbjct: 415 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL 474

Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF---IRTMP 867
           + +      VE+  + F+  +     I  +  ++ M+    + G  +EA      ++ M 
Sbjct: 475 IDSYGKCSHVEDAERIFEECT-----IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 529

Query: 868 FKPDATIWGALLGSC 882
            KPD  +  +LL +C
Sbjct: 530 LKPDRFVCSSLLNAC 544



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 163/340 (47%), Gaps = 9/340 (2%)

Query: 196 CFLNETNK--FRCLSSVKSK-HAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFF 251
           C L+E ++     L  +K + H+ ++KM     SD  V   L+  Y +      A  AF 
Sbjct: 334 CVLHEHHEQALELLGQMKRQLHSSLMKMD--MESDLFVSVGLVDMYSKCDLLEDARMAFN 391

Query: 252 LYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFW 311
           L   +    W++ +  Y  +  E  E L ++ E+H +G+ F    L+ ILK    L    
Sbjct: 392 LLPEKDLIAWNAIISGYSQYW-EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 450

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           +  +VH   +K GF  D+++  +L++ YGKC  VE A ++F E + + D + +  +I   
Sbjct: 451 VCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT-IGDLVSFTSMITAY 509

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            +  + E A+KLF EMQ    K        +L ACA + AF +GKQ+H ++LK     ++
Sbjct: 510 AQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDI 569

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
              N L++MY++   ++ A R F  + +  + SW++MI      G+   A  LFN+M   
Sbjct: 570 FAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKE 629

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRP 530
            + P+ IT   +L      G           M+ L GF+P
Sbjct: 630 GVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKP 669



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 31/299 (10%)

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
           F P   S S +L      + L+ G + H +I ++GL  D  +   L+++Y K      A+
Sbjct: 52  FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYAR 111

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-- 645
           ++ D     ++V+W++LISGY   GL   A    ++M    +K +  +++S++   SI  
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171

Query: 646 ---WGQSKEALVIIHHMKNSGIYP--------------------------NVVTWTSLIS 676
               G+    +V++   +                                NVV+W +L S
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
             +Q +   E++  F +M    IKPN  ++SS++  C GL     GK IH   +K G+  
Sbjct: 232 CYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           D + A  L+DMY+K G+L  A  VF K     + SWN +I G  ++ + ++A+ L  ++
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 64/121 (52%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           + + +  P S + S LL  C     L+ G +IH    K+G   D  +   LI++YSK   
Sbjct: 47  IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRX 106

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
              AR++  +S+   L SW+ +I G+A  G G  A++ FHE+   G + +  TF+++L A
Sbjct: 107 FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKA 166

Query: 814 C 814
           C
Sbjct: 167 C 167


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 266/768 (34%), Positives = 393/768 (51%), Gaps = 80/768 (10%)

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A ++F  +    D   +N +I        +  AI L+R M +        T   +L+AC+
Sbjct: 52   ARQVFDRIP-APDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACS 110

Query: 408  KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
             +     G+ IH +     L ++L V   LI +Y R  +   A  VF  M          
Sbjct: 111  ALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP--------- 161

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
                                        D++ WN +L+G+  HG Y + +  L  MQ  G
Sbjct: 162  --------------------------MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRG 195

Query: 528  -FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD---LYVGTSLMDMYVKNDCL 583
              RPN S++  +L  + +   L  G   H Y LR  LD +   + +GT+L+DMY K   L
Sbjct: 196  GLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHL 255

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYC-----------FKGLFVNAKKMLNQ--------- 623
              A  VF  M  RN V W++LI G+            FK + V     L+          
Sbjct: 256  VYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRV 315

Query: 624  ----------------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                            + +  I  DL + NSL+S Y+  G   EA ++   +       +
Sbjct: 316  CASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA----IKD 371

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
             +++ +L+SG +QN    E+   F +MQ  +++P+  TM SL+  C  L  LQ+G+  H 
Sbjct: 372  TISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHG 431

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              +  G   +  +   LIDMY+K G +  +R+VF K   + + SWN MI G+ I+G GKE
Sbjct: 432  SVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKE 491

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A  LF  +   GF+PD +TF  L+AAC +SGLV EG  +FD+M+  Y I+P +EHY CMV
Sbjct: 492  ATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMV 551

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLL + G+LDEA+ FI++MP K D  +WGALLG+CRIH +++  +  SR + KL P  + 
Sbjct: 552  DLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTG 611

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            N+ L+ N+ + + R+++   +R      G K     SWI+I+  +H F      HP + +
Sbjct: 612  NFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPD 671

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY EL +++ ++KKLGY  DT  V QD++EEEK K LL H+EKLAI +G++       I 
Sbjct: 672  IYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIF 731

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V KN RVC DCHTA KYM+LVR R I +RD  RFHHF+ G+CSC D W
Sbjct: 732  VTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 124/537 (23%), Positives = 226/537 (42%), Gaps = 85/537 (15%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C+ L     G  +HA     G   D+ +  AL++ Y +C     A  +F+++  + 
Sbjct: 105 VLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP-MR 163

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFHEGKQI 418
           D + WN ++     +  + +AI    +MQ     +  + T+V +L   A+ GA  +G  +
Sbjct: 164 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSV 223

Query: 419 HGYVLKSALESN---LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           H Y L++ L+ N   + +   L+ MY++   L  A RVF  M   N  +W+++I  +   
Sbjct: 224 HAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLC 283

Query: 476 GYVDVAWSLFNKM------------------------------------NSSRIQPDIIT 499
             +  A++LF  M                                      S I  D+  
Sbjct: 284 DRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTA 343

Query: 500 WNCLLS-------------------------------GHFTHGSYQNVLTLLRGMQSLGF 528
            N LLS                               G+  +G  +    + + MQ+   
Sbjct: 344 GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           +P+ +++  ++ A + L  L++GR SHG ++  GL  +  +  SL+DMY K   +  +++
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VFD M  R+IV+WN++I+GY   GL   A  +   M+ +  +PD V++  L++  S  G 
Sbjct: 464 VFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGL 523

Query: 649 SKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             E       M +  GI P +  +  ++    +     E+ +F   +Q   +K +     
Sbjct: 524 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQF---IQSMPLKADVRVWG 580

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG----LIDMYSKSGNLKSAREV 760
           +LL  C     +  GK++  +  K G        TG    L +++S +G    A EV
Sbjct: 581 ALLGACRIHKNIDLGKQVSRMIQKLG-----PEGTGNFVLLSNIFSAAGRFDEAAEV 632



 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 177/377 (46%), Gaps = 31/377 (8%)

Query: 143 HSIYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETN 202
           H +YHH        Q+R   +PN+     T ++L P   LA+   L        F   + 
Sbjct: 178 HGMYHHAIAHLLDMQDRGGLRPNA----STLVSLLPL--LAQHGAL--------FQGTSV 223

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
              CL +   ++ + + +G          +L+  Y +      A + F     R+   WS
Sbjct: 224 HAYCLRAYLDQNEEQVLIGT---------ALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLI 321
           + +  +      + E   ++ ++  +G+ F S   +   L++C  L    +G ++HA L 
Sbjct: 275 ALIGGF-VLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLA 333

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           K G   D+    +L++ Y K   +  A  LF E++ ++D + +  ++   ++N K E A 
Sbjct: 334 KSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA-IKDTISYGALLSGYVQNGKAEEAF 392

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            +F++MQ  + +    T+V ++ AC+ + A   G+  HG V+   L    S+CN LI MY
Sbjct: 393 LVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMY 452

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           ++  +++L+ +VFD M   ++ SWN+MI+ Y   G    A +LF  M +   +PD +T+ 
Sbjct: 453 AKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFI 512

Query: 502 CLL-----SGHFTHGSY 513
           CL+     SG  T G +
Sbjct: 513 CLIAACSHSGLVTEGKH 529


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 267/794 (33%), Positives = 420/794 (52%), Gaps = 84/794 (10%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            ++HA L+  G   ++ L   L+N Y    D+  +   F  +   ++   WN II   +R 
Sbjct: 40   KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK-KNIFSWNSIISAYVRF 98

Query: 375  EKWENAI----KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             K+  A+    +LF        +    T   +L+AC    +  +GK++H  V K   E +
Sbjct: 99   GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDD 155

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
            + V   L+ +YSR                                G +DVA  +F  M  
Sbjct: 156  VFVAASLVHLYSR-------------------------------YGVLDVAHKVFVDMPV 184

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                 D+ +WN ++SG   +G+    L +L  M+  G + +  +V+ +L    +   +  
Sbjct: 185  K----DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY-- 608
            G   H ++L++GLD D++V  +L++MY K   LQ+AQ VFD M+ R++V+WNS+I+ Y  
Sbjct: 241  GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300

Query: 609  ---------CFKGL-----------FVNAKKMLNQMEEEEIK--------------PDLV 634
                      FKG+            V+   + +Q+ ++ I                D+V
Sbjct: 301  NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
              N+LV+ Y+  G    A  +   +       + ++W +L++G  QN    E++  +  M
Sbjct: 361  IGNALVNMYAKLGYMNCAHTVFDQLPRK----DTISWNTLVTGYTQNGLASEAIDAYNMM 416

Query: 695  QQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            ++  D  PN  T  S++     +G LQ G +IH   +KN    D +VAT LID+Y K G 
Sbjct: 417  EECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            L+ A  +F +    T   WN +I    I+G G+EA+ LF ++L    + D ITF +LL+A
Sbjct: 477  LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C +SGLV+EG K FD M  +Y I P+++HY CMVDLLG+AGYL++A++ +R MP +PDA+
Sbjct: 537  CSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            IWGALL +C+I+G+ E   +AS RL +++  N   Y L+ N+ A + +WE V ++R    
Sbjct: 597  IWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLAR 656

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            + G++    WS + +     VF      HP   EIY EL  L ++MK LGYVPD   VYQ
Sbjct: 657  DRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQ 716

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            DI+E+EK ++L SH+E+LAI +G++ T  R+PIR+ KN RVC DCH A KY+S +  REI
Sbjct: 717  DIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREI 776

Query: 1054 FLRDGARFHHFREG 1067
             +RD  RFHHF++G
Sbjct: 777  VVRDSNRFHHFKDG 790



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 171/663 (25%), Positives = 291/663 (43%), Gaps = 97/663 (14%)

Query: 179 TDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS--LIFH 236
           T +L K A  + + +    +N T K          HA ++  GK   S ++V S  LI  
Sbjct: 16  TTSLHKDADFNALFNSCVNVNATKKL---------HALLLVFGK---SQNIVLSTKLINL 63

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE------VQELLEVWGELHGKGV 290
           Y+  GD + +   F     ++   W+S +  Y  FG        V +L  + G  H +  
Sbjct: 64  YVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPD 123

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
            +       ILK C  L+    G +VH  + K GF+ DV +  +L++ Y +   ++ A+K
Sbjct: 124 FY---TFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHK 177

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F ++  ++D   WN +I    +N     A+ +   M+    K  + T+  +L  CA+  
Sbjct: 178 VFVDMP-VKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSD 236

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
               G  IH +VLK  L+S++ V N LI+MYS+  +L+ A  VFD M+  +L SWNS+I+
Sbjct: 237 DVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
           +Y        A   F  M    I+PD++T   L S                         
Sbjct: 297 AYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS------------------------- 331

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                  +   +++ R+    R   G+++R   LD D+ +G +L++MY K   +  A  V
Sbjct: 332 -------IFSQLSDQRI---SRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTV 381

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQ 648
           FD +  ++ ++WN+L++GY   GL   A    N MEE  +  P+  +W S++  YS  G 
Sbjct: 382 FDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGA 441

Query: 649 SKEALVIIHHMKNSGIYPNV-------------------------------VTWTSLISG 677
            ++ + I   +  + +Y +V                               V W ++I+ 
Sbjct: 442 LQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS 501

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              +    E+L+ F  M  E +K +  T  SLL  C   GL+  G++   +  K   IK 
Sbjct: 502 LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKP 561

Query: 738 AYVATG-LIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHEL 795
           +    G ++D+  ++G L+ A E+ R    +  AS W  ++    IYGN +   L    L
Sbjct: 562 SLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRL 621

Query: 796 LET 798
           LE 
Sbjct: 622 LEV 624


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 294/953 (30%), Positives = 477/953 (50%), Gaps = 100/953 (10%)

Query: 211  KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFL--YFSRSYADWSSFLED 267
            K  HA ++  G   N D  V  +LI  Y + G   SA K F +     R    +++ L  
Sbjct: 33   KRTHAVIVTSG--LNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90

Query: 268  YESFGGEVQELLEVWGELHGKGVIFRSRILTI------ILKLCTKLMAFWLGVEVHASLI 321
            Y +  GE+ ++ +     H   ++ +S +LT       + KLC    +      +    +
Sbjct: 91   Y-AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV 149

Query: 322  KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
            K G  +DV +  AL+N Y K + +  A  LF  +  + D +LWN ++   +     +  +
Sbjct: 150  KIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP-VRDVVLWNVMMKAYVEMGAGDEVL 208

Query: 382  KLFREMQFSSAKAISRTIVKMLQACAKVGAF-HEGKQIHGYVLKSAL---ESNLSVCN-- 435
             LF     S  +    ++  +L    K   F  E +Q+  Y  K  +   +S+++V N  
Sbjct: 209  GLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKT 268

Query: 436  ---------------------------------CLISMYSRNNKLELATRVFDSMK---- 458
                                              ++S+ +  N LEL  ++  ++     
Sbjct: 269  LSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGW 328

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
            D  +S  NS I+ Y   G V+ A  +F +M     + D+I+WN ++SG    G  +  L 
Sbjct: 329  DQFVSVANSAINMYVKAGSVNYARRMFGQMK----EVDLISWNTVISGCARSGLEECSLR 384

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTELR-LLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
            L   +   G  P+  +++ VL+A + L      GR+ H   L+ G+  D +V T+L+D+Y
Sbjct: 385  LFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVY 444

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
             K   ++ A+ +F N    ++ +WN+++ G+     +  A ++ + M E   K D +++ 
Sbjct: 445  SKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA 504

Query: 638  S-------------------------------LVSG----YSIWGQSKEALVIIHHMKNS 662
            +                               ++SG    Y   G+ K A  + + + + 
Sbjct: 505  NAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPS- 563

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               P+ V WT++ISG ++N    ++L  + QM+   ++P+  T ++L++ C  L  L+ G
Sbjct: 564  ---PDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQG 620

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            K+IH   +K     D +V T L+DMY+K GN++ A  +FR+   +++A WN MI+G A +
Sbjct: 621  KQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQH 680

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            GN +EA+  F+E+   G  PD +TF  +L+AC +SGL  + +K FDSM   Y + P IEH
Sbjct: 681  GNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEH 740

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            YSC+VD L +AG++ EA   + +MPF+  AT++  LL +CR+ G  E  E  + +LF ++
Sbjct: 741  YSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMD 800

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P +SA Y L+ N+ A +N+WE+    R+ M  V VK    +SWI +   VH+F A    H
Sbjct: 801  PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSH 860

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
              T  IY ++ +++  +K+ GYVPDT     DI+EE+K   L  H+EKLAI YGLMKT  
Sbjct: 861  EETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPP 920

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               +RVIKN RVC DCH A KY+S V  REI LRD  RFHHFR G CSC D W
Sbjct: 921  STTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  226 bits (576), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 163/663 (24%), Positives = 294/663 (44%), Gaps = 90/663 (13%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMV 370
           LG   HA ++  G + D ++   L+  Y KC  + SA KLF      + DL+ +N I+  
Sbjct: 31  LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90

Query: 371 KLRN------EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
                     EK   A  +FR ++ S       T+  + + C   G+    + + GY +K
Sbjct: 91  YAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
             L+ ++ V   L+++Y++  ++  A  +FD M   ++  WN M+ +Y  +G  D    L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210

Query: 485 FNKMNSSRIQPDIIT---------------------------------------WNCLLS 505
           F+  + S ++PD ++                                       WN  LS
Sbjct: 211 FSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLS 270

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            +   G     +   R M       +  +  V+L  V  L  L+ G++ HG ++R G D 
Sbjct: 271 SYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQ 330

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            + V  S ++MYVK   +  A+ +F  MK  ++++WN++ISG    GL   + ++   + 
Sbjct: 331 FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLL 390

Query: 626 EEEIKPDLVSWNS------------------------------------LVSGYSIWGQS 649
              + PD  +  S                                    L+  YS  G+ 
Sbjct: 391 RSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKM 450

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           +EA ++ H+        ++ +W +++ G   ++NYRE+L+ F  M +   K +  T ++ 
Sbjct: 451 EEAELLFHNQDGF----DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANA 506

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            +  G L  LQ GK+IH + +K  F  D +V +G++DMY K G +KSAR+VF +  +   
Sbjct: 507 AKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD 566

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFD 828
            +W  +I G    G  ++A+  +H++   G QPD  TF  L+ AC     +E+G + + +
Sbjct: 567 VAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHAN 626

Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            M  +    P +   + +VD+  K G +++A+   R M  +  A +W A++     HG+ 
Sbjct: 627 IMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNAMIVGLAQHGNA 683

Query: 889 EYA 891
           E A
Sbjct: 684 EEA 686



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 9/266 (3%)

Query: 197 FLNETNKFRCLSSV---KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFL 252
           F N      CL  +   K  HA +IKM   ++ D  V S I   YL+ G+  SA K F  
Sbjct: 503 FANAAKAAGCLVRLQQGKQIHAVVIKMR--FHYDLFVISGILDMYLKCGEMKSARKVFNQ 560

Query: 253 YFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWL 312
             S     W++ +      G E Q L   + ++   GV         ++K C+ L A   
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALF-TYHQMRLAGVQPDEYTFATLVKACSLLTALEQ 619

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++HA+++K    FD  +  +L++ Y KC ++E A  LF  + +     LWN +I+   
Sbjct: 620 GKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM-NTRSVALWNAMIVGLA 678

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNL 431
           ++   E A+  F EM+         T + +L AC+  G   +  +    + K+  +E  +
Sbjct: 679 QHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEI 738

Query: 432 SVCNCLISMYSRNNKLELATRVFDSM 457
              +CL+   SR   ++ A +V  SM
Sbjct: 739 EHYSCLVDALSRAGHIQEAEKVVSSM 764



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 77/396 (19%), Positives = 159/396 (40%), Gaps = 59/396 (14%)

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD--NM 593
           S++  A+ +  L+  G+ +H  I+ +GL+ D YV  +L+ MY K   L +A+++FD    
Sbjct: 18  SILRHAIADSDLI-LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKK------MLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            +R++V +N++++ Y   G   + +K      +   + +  +     + + L     ++G
Sbjct: 77  SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN-----ENYRESLKFFIQMQQEDIKPN 702
               +  +  +    G+      W   ++G+L N     +  RE+   F +M   D+   
Sbjct: 137 SPSASEALQGYAVKIGL-----QWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLW 191

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
           +  M + ++   G  +L      H    ++G   D      ++    K    +   E  R
Sbjct: 192 NVMMKAYVEMGAGDEVLGLFSAFH----RSGLRPDCVSVRTILMGVGKKTVFERELEQVR 247

Query: 763 KSANK--------TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
             A K         +  WN  +  +   G G EA+  F +++++    D++T+  +L+  
Sbjct: 248 AYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVV 307

Query: 815 K-----------NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
                       +  +V  GW  F S++            +  +++  KAG ++ A    
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVA------------NSAINMYVKAGSVNYARRMF 355

Query: 864 RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
             M  + D   W  ++  C   G     E  S RLF
Sbjct: 356 GQMK-EVDLISWNTVISGCARSG----LEECSLRLF 386


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/730 (33%), Positives = 387/730 (53%), Gaps = 72/730 (9%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            A  LFR M+    KA   T+  +L+ C+ +G    G+ IHG+V+K+  E N+ V   L+ 
Sbjct: 146  AFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVD 205

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            MY++   +  A  +F  ++                          F++ N        + 
Sbjct: 206  MYAKCKCVSEAEFLFKGLE--------------------------FDRKNH-------VL 232

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
            W  +++G+  +G     +   R M + G   N  +   +L A + +    +G + HG+I+
Sbjct: 233  WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            ++G   ++YV ++L+DMY K   L+NA+ + + M++ ++V+WNSL+ G+   GL   A +
Sbjct: 293  KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352

Query: 620  MLNQMEEEEIKPD----------------------------------LVSWNSLVSGYSI 645
            +   M    +K D                                  LVS N+LV  Y+ 
Sbjct: 353  LFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVS-NALVDMYAK 411

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G    A  +   M    +  +V++WTSL++G  QN ++ ESLK F  M+   + P+   
Sbjct: 412  TGDMDCAYTVFEKM----LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFI 467

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
            ++S+L  C  L LL+ GK++H   +K+G      V   L+ MY+K G L  A  +F    
Sbjct: 468  VASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQ 527

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
             K + +W  +I+G+A  G G+ ++  +  ++ +G +PD ITF  LL AC ++GLV+EG K
Sbjct: 528  VKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRK 587

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            YF  M+  Y I P  EHY+CM+DL G++G LDEA   +  M  KPDAT+W +LL +CR+H
Sbjct: 588  YFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVH 647

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
             +LE AE A+  LF+LEP N+  Y ++ N+ + S +W DV ++R  M   G+      SW
Sbjct: 648  ENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSW 707

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            ++I+  V+ F ++   HP   EIY ++  ++  +K+ GYVPD      D+D+E K   L 
Sbjct: 708  LEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLA 767

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+EKLA+ +GL+     APIR+ KN RVC DCH+A KY+S V  R I LRD   FHHFR
Sbjct: 768  YHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFR 827

Query: 1066 EGECSCNDCW 1075
            EGECSC D W
Sbjct: 828  EGECSCGDYW 837



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 252/543 (46%), Gaps = 59/543 (10%)

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
           W N I   R +Q       S  ++       K  AF   + IH     +A   ++   N 
Sbjct: 15  WLNKITDERTVQQVIMHKFSSKVLSFPHNPCKFMAFL--RSIH--TTTAASYESIYQTNQ 70

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           L++  S++ ++  A ++FD M   +  SWN+MISSY  +G +  A  LF+  +       
Sbjct: 71  LLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITW 130

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
                  +SG+   G       L R M+  G++ +  ++  VL+  + L L++ G   HG
Sbjct: 131 SSI----ISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHG 186

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK--NRNIVAWNSLISGYCFKGLF 614
           ++++NG + +++V T L+DMY K  C+  A+ +F  ++   +N V W ++++GY   G  
Sbjct: 187 FVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDG 246

Query: 615 VNAKKMLNQMEEEEIK------PDLVS-----------------------------WNSL 639
             A +    M  + ++      P +++                              ++L
Sbjct: 247 YKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSAL 306

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           V  Y+  G  K A  ++  M++     +VV+W SL+ G +++    E+L+ F  M   ++
Sbjct: 307 VDMYAKCGDLKNAKNMLETMEDD----DVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNM 362

Query: 700 KPNSTTMSSLLQTC--GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
           K +  T  S+L  C  G +    N K +H L +K GF     V+  L+DMY+K+G++  A
Sbjct: 363 KIDDYTFPSVLNCCVVGSI----NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             VF K   K + SW  ++ G+A   + +E++ +F ++  TG  PD     ++L+AC   
Sbjct: 419 YTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAEL 478

Query: 818 GLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            L+E G + + D + +      ++  Y+ +V +  K G LD+A     +M  K D   W 
Sbjct: 479 TLLEFGKQVHLDFIKSGLRWSQSV--YNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWT 535

Query: 877 ALL 879
           A++
Sbjct: 536 AII 538



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 149/597 (24%), Positives = 260/597 (43%), Gaps = 92/597 (15%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y+  G    A + F     +S   WSS +  Y  FG +V E  +++  +  +G  
Sbjct: 101 TMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKV-EAFDLFRSMRLEGWK 159

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  +L++C+ L     G  +H  ++K GF+ +V +   L++ Y KC+ V  A  L
Sbjct: 160 ASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFL 219

Query: 352 FSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           F  +  D ++ +LW  ++    +N     A++ FR M     +    T   +L AC+ V 
Sbjct: 220 FKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVL 279

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A   G+Q+HG+++KS   SN+ V + L+ MY++   L+ A  + ++M+D ++ SWNS++ 
Sbjct: 280 ARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMV 339

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITW----NCLLSGHFTHGSYQNVLTLLRGMQSL 526
            +   G  + A  LF  M+   ++ D  T+    NC + G                    
Sbjct: 340 GFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI------------------ 381

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
               N  SV                   HG I++ G +    V  +L+DMY K   +  A
Sbjct: 382 ----NPKSV-------------------HGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--LVS--------- 635
             VF+ M  +++++W SL++GY        + K+   M    + PD  +V+         
Sbjct: 419 YTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAEL 478

Query: 636 ------------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
                                   +NSLV+ Y+  G   +A  I   M+      +V+TW
Sbjct: 479 TLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQ----VKDVITW 534

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
           T++I G  QN   R SLKF+  M     +P+  T   LL  C   GL+  G++      K
Sbjct: 535 TAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNK 594

Query: 732 NGFIK---DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN 784
              IK   + Y    +ID++ +SG L  A+++  +   K  A+ W  ++    ++ N
Sbjct: 595 VYGIKPGPEHYAC--MIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHEN 649


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 267/761 (35%), Positives = 406/761 (53%), Gaps = 69/761 (9%)

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKL-RNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            A KLF    D  D ++WN+ +   L R E WE A+  F +M  S       T V ML   
Sbjct: 887  ATKLFMYDDDGSDVIVWNKALSRFLQRGEAWE-AVDCFVDMINSRVACDGLTFVVMLTVV 945

Query: 407  AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
            A +     GKQIHG V++S L+  +SV NCLI+MY +                       
Sbjct: 946  AGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVK----------------------- 982

Query: 467  SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
                     G V  A S+F +MN    + D+I+WN ++SG    G  +  + +   +   
Sbjct: 983  --------AGSVSRARSVFGQMN----EVDLISWNTMISGCTLSGLEECSVGMFVHLLRD 1030

Query: 527  GFRPNGSSVSVVLQAVTELRLLKY-GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
               P+  +V+ VL+A + L    Y   + H   ++ G+  D +V T+L+D+Y K   ++ 
Sbjct: 1031 SLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEE 1090

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---LVSWNSLVSG 642
            A+ +F N    ++ +WN+++ GY   G F  A ++   M+E   + D   LV+      G
Sbjct: 1091 AEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGG 1150

Query: 643  YSIWGQSKE--ALVI-----IHHMKNSGIY---------------------PNVVTWTSL 674
                 Q K+  A+V+     +     SG+                      P+ V WT++
Sbjct: 1151 LVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTM 1210

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            ISG ++N     +L  + QM+   ++P+  T ++L++ C  L  L+ G++IH   +K   
Sbjct: 1211 ISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNC 1270

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              D +V T L+DMY+K GN++ AR +F+++  + +ASWN MI+G A +GN KEA+  F  
Sbjct: 1271 AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKY 1330

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +   G  PD +TF  +L+AC +SGLV E ++ F SM  +Y I P IEHYSC+VD L +AG
Sbjct: 1331 MKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAG 1390

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             ++EA   I +MPF+  A+++  LL +CR+    E  +  + +L  LEP +SA Y L+ N
Sbjct: 1391 RIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSN 1450

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A +N+WE+V   R+ M +V VK    +SW+ +   VH+F A    H  T  IY ++ +
Sbjct: 1451 VYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEY 1510

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            ++  +++ GYVPDT     D++EE+K   L  H+EKLAI YGLMKT     +RVIKN RV
Sbjct: 1511 IMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRV 1570

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH+A KY+S V  REI LRD  RFHHFR G CSC D W
Sbjct: 1571 CGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 128/560 (22%), Positives = 241/560 (43%), Gaps = 74/560 (13%)

Query: 238  LEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRS 294
            LE   F + A   F+Y     +D   W+  L  +    GE  E ++ + ++    V    
Sbjct: 878  LELKQFKAYATKLFMY-DDDGSDVIVWNKALSRFLQ-RGEAWEAVDCFVDMINSRVACDG 935

Query: 295  RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
                ++L +   L    LG ++H  +++ G D  V +   L+N Y K   V  A  +F +
Sbjct: 936  LTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQ 995

Query: 355  VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV-GAFH 413
            ++++ D + WN +I     +   E ++ +F  +   S      T+  +L+AC+ + G ++
Sbjct: 996  MNEV-DLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYY 1054

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
               QIH   +K+ +  +  V   LI +YS+  K+E A  +F +    +L+SWN++     
Sbjct: 1055 LATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAI----- 1109

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                                          + G+   G +   L L   MQ  G R +  
Sbjct: 1110 ------------------------------MHGYIVSGDFPKALRLYILMQESGERSDQI 1139

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            ++    +A   L  LK G++ H  +++ G + DL+V + ++DMY+K   +++A+ VF  +
Sbjct: 1140 TLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEI 1199

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
             + + VAW ++ISG    G   +A    +QM   +++PD  ++ +LV   S+    ++  
Sbjct: 1200 PSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGR 1259

Query: 654  VIIHHMK--NSGIYPNVVT-----------------------------WTSLISGSLQNE 682
             I  ++   N    P V+T                             W ++I G  Q+ 
Sbjct: 1260 QIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHG 1319

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVA 741
            N +E+L+FF  M+   + P+  T   +L  C   GL+    E      KN G   +    
Sbjct: 1320 NAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHY 1379

Query: 742  TGLIDMYSKSGNLKSAREVF 761
            + L+D  S++G ++ A +V 
Sbjct: 1380 SCLVDALSRAGRIEEAEKVI 1399



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 212/494 (42%), Gaps = 74/494 (14%)

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            GK+ H  +L S    +  V N LI+MY++   L  A ++FD+  D N             
Sbjct: 675  GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN------------- 721

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN----VLTLLRGMQSLGFRP 530
                                 D++TWN +LS    H    +    +  LLR       R 
Sbjct: 722  --------------------RDLVTWNAILSALAAHADKSHDGFHLFRLLR-------RS 754

Query: 531  NGSSVSVVLQAVTELRLLKYGRES----HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
              S+    L  V ++ LL     +    HGY ++ GL +D++V  +L+++Y K   ++ A
Sbjct: 755  VVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREA 814

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
            + +FD M  R++V WN ++  Y    L   A  + ++      +PD V+  +L    S  
Sbjct: 815  RVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL----SRV 870

Query: 647  GQSKEALVIIHHMKNSGIY--------PNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
             + K+ ++ +   K              +V+ W   +S  LQ     E++  F+ M    
Sbjct: 871  VKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            +  +  T   +L    GL  L+ GK+IH + +++G  +   V   LI+MY K+G++  AR
Sbjct: 931  VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             VF +     L SWN MI G  + G  + ++ +F  LL     PD  T  ++L AC +  
Sbjct: 991  SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL- 1049

Query: 819  LVEEGWKYFDSM----STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
               EG  Y  +     +    ++      + ++D+  K G ++EA +F+       D   
Sbjct: 1050 ---EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEA-EFLFVNQDGFDLAS 1105

Query: 875  WGALLGSCRIHGHL 888
            W A++     HG++
Sbjct: 1106 WNAIM-----HGYI 1114



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 161/336 (47%), Gaps = 14/336 (4%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            HA  +K G + +S  +  +LI  Y + G    A   F        A W++ +  Y    G
Sbjct: 1060 HACAMKAGVVLDSF-VSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGY-IVSG 1117

Query: 274  EVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
            +  + L ++  +   G   RS  +T++   K    L+    G ++HA ++KRGF+ D+ +
Sbjct: 1118 DFPKALRLYILMQESGE--RSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFV 1175

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
               +++ Y KC ++ESA ++FSE+    DD+ W  +I   + N + E+A+  + +M+ S 
Sbjct: 1176 TSGVLDMYLKCGEMESARRVFSEIPS-PDDVAWTTMISGCVENGQEEHALFTYHQMRLSK 1234

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
             +    T   +++AC+ + A  +G+QIH  ++K     +  V   L+ MY++   +E A 
Sbjct: 1235 VQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDAR 1294

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             +F       ++SWN+MI      G    A   F  M S  + PD +T+  +LS     G
Sbjct: 1295 GLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSG 1354

Query: 512  ----SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                +Y+N  ++    ++ G  P     S ++ A++
Sbjct: 1355 LVSEAYENFYSM---QKNYGIEPEIEHYSCLVDALS 1387



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 76/390 (19%), Positives = 144/390 (36%), Gaps = 74/390 (18%)

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK- 594
            S++ QA+    L   G+ +H  IL +G   D +V  +L+ MY K   L +A+++FD    
Sbjct: 661  SILRQAIAASDL-SLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPD 719

Query: 595  -NRNIVAWNSLISGYCFKG--------LFVNAKKMLNQMEEEEIKPDL------------ 633
             NR++V WN+++S              LF   ++ +       + P              
Sbjct: 720  TNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS 779

Query: 634  -----------VSWNSLVSG-----YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                       + W+  V+G     Y+ +G  +EA V+   M       +VV W  ++  
Sbjct: 780  ESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA----VRDVVLWNVMMKA 835

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF-IK 736
             +      E++  F +  +   +P+  T+ +L +                 C KN   +K
Sbjct: 836  YVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVK--------------CKKNILELK 881

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
                    + MY   G+               +  WN  +  F   G   EA+  F +++
Sbjct: 882  QFKAYATKLFMYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMI 927

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
             +    D +TF  +L        +E G K    +     +   +   +C++++  KAG +
Sbjct: 928  NSRVACDGLTFVVMLTVVAGLNCLELG-KQIHGIVMRSGLDQVVSVGNCLINMYVKAGSV 986

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
              A      M  + D   W  ++  C + G
Sbjct: 987  SRARSVFGQMN-EVDLISWNTMISGCTLSG 1015


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/813 (31%), Positives = 431/813 (53%), Gaps = 79/813 (9%)

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
             ++L+ C+ L       ++   + K G   +   +  L++ + +   V+ A ++F  + D
Sbjct: 41   ALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI-D 96

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
             + ++L++ ++    +    + A++ F  M++   + +      +L+ C        GK+
Sbjct: 97   SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            IHG ++KS    +L     L +MY++  ++  A +VFD M +                  
Sbjct: 157  IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----------------- 199

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
                              D+++WN +++G+  +G  +  L +++ M     +P+  ++  
Sbjct: 200  ------------------DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            VL AV+ LRL+  G+E HGY +R+G D  + + T+L+DMY K   L+ A+++FD M  RN
Sbjct: 242  VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--------------------- 636
            +V+WNS+I  Y        A  +  +M +E +KP  VS                      
Sbjct: 302  VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361

Query: 637  --------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                          NSL+S Y    +   A  +   +++      +V+W ++I G  QN 
Sbjct: 362  LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNG 417

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               ++L +F QM+   +KP++ T  S++     L +  + K IH + +++   K+ +V T
Sbjct: 418  RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             L+DMY+K G +  AR +F   + + + +WN MI G+  +G GK A+ LF E+ +   +P
Sbjct: 478  ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + +TF ++++AC +SGLVE G K F  M  +Y+I  +++HY  MVDLLG+AG L+EAWDF
Sbjct: 538  NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 597

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MP KP   ++GA+LG+C+IH ++ +AE A+ RLF+L P +   + L+ N+   ++ W
Sbjct: 598  IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 657

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            E V ++R SM   G++     S ++I   VH F +    HP + +IY  L  L+  +K+ 
Sbjct: 658  EKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA 717

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVPDT  V   ++ + K ++L +H+EKLAI +GL+ T +   I V KN RVC+DCH A 
Sbjct: 718  GYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNAT 776

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KY+SLV GREI +RD  RFHHF+ G CSC D W
Sbjct: 777  KYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 13/228 (5%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +V SLI  Y +  +  +AA  F    SR+   W++ +  +   G  + + L  + ++  +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI-DALNYFSQMRSR 432

Query: 289 GV----IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            V         ++T I +L     A W    +H  +++   D +V +  AL++ Y KC  
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKW----IHGVVMRSCLDKNVFVTTALVDMYAKCGA 488

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           +  A  +F  +S+      WN +I     +   + A++LF EMQ  + K    T + ++ 
Sbjct: 489 IMIARLIFDMMSE-RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547

Query: 405 ACAKVGAFHEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELA 450
           AC+  G    G +   Y++K   ++E ++     ++ +  R  +L  A
Sbjct: 548 ACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Cucumis sativus]
          Length = 878

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/829 (30%), Positives = 420/829 (50%), Gaps = 65/829 (7%)

Query: 276  QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
            +E L ++ +LH  G+      L+  LK+C  L    +G +VH   +K GF  DV +  +L
Sbjct: 86   REALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSL 145

Query: 336  MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
            ++ Y K  D E    +F E+  +++ + W  ++    RN   +  I L  +MQ       
Sbjct: 146  VDMYMKTEDFEDGRGIFDEMG-IKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPN 204

Query: 396  SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
              T   +L A A       G Q+H  ++K+  E    VCN LI MY ++  +  A  VFD
Sbjct: 205  GFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFD 264

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            SM                                   +  D +TWN ++ G+   G Y  
Sbjct: 265  SM-----------------------------------VVRDSVTWNIMIGGYAAIGFYLE 289

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
               +   M+  G + + +     L+  ++ R L + ++ H  +++NG ++   + T+LM 
Sbjct: 290  GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349

Query: 576  MYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
             Y K   +  A ++F       N+V W ++I G+        A  +  QM  E ++P+  
Sbjct: 350  TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHF 409

Query: 635  SWNSLVSGY--SIWGQSKEALVIIHHMKNSGIYP-------------------------N 667
            +++++++G   S+  Q    ++  ++ K   +                           +
Sbjct: 410  TYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG-LGLLQNGKEIH 726
            +V W+++++G  Q  +  ++++ FIQ+ +E +KPN  T SS++  C      +++GK+IH
Sbjct: 470  IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               +K+G      V++ L+ MYSK GN++SA +VF +   + + SWN MI G+  +G+ K
Sbjct: 530  ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            +A+ +F  +   G   D +TF  +L AC ++GLVEEG KYF+ M  DY+I   IEHYSCM
Sbjct: 590  KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCM 649

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VDL  +AG  D+A D I  MPF    TIW  LL +CR+H +LE  ++A+ +L  L+P ++
Sbjct: 650  VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
              Y L+ N+ A++  WE+   +R  MDE  VK     SWI+I   +  F A    HP + 
Sbjct: 710  VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSD 769

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
             +Y +L  L  ++K +GY PDT  V+ D++EE K  +L  H+E+LAI YGL+     API
Sbjct: 770  LVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPI 829

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++ KN R+C DCH   + +SL+  R + +RD  RFHHF+ G CSC   W
Sbjct: 830  QIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 144/576 (25%), Positives = 260/576 (45%), Gaps = 73/576 (12%)

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A++LF E + L+D   +N ++    RN     A+ LF+++  S       T+   L+ C 
Sbjct: 57  AHQLFDE-TPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +     G+Q+H   LKS    ++SV   L+ MY +    E    +FD M   N+ SW S
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           ++S Y   G  D    L N+M                                   Q  G
Sbjct: 176 LLSGYARNGLNDEVIHLINQM-----------------------------------QMEG 200

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             PNG + + VL A+ +  +++ G + H  I++NG ++  +V  +L+ MY+K++ + +A+
Sbjct: 201 VNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAE 260

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV------- 640
            VFD+M  R+ V WN +I GY   G ++   +M ++M    +K     + + +       
Sbjct: 261 AVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQR 320

Query: 641 --------------SGYSIWGQSKEALVIIHHMKNS-----------GIYPNVVTWTSLI 675
                         +GY      + AL++ +   +S               NVVTWT++I
Sbjct: 321 ELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMI 380

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            G +QN N  +++  F QM +E ++PN  T S++L       L Q    +H   +K  + 
Sbjct: 381 GGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQ----LHAQIIKAYYE 436

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           K   VAT L+D Y K+GN+  +  VF     K + +W+ M+ G A   + ++A+ +F +L
Sbjct: 437 KVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQL 496

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           ++ G +P+  TF++++ AC +S    E  K   + +        +   S ++ +  K G 
Sbjct: 497 VKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGN 556

Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           ++ A + + T   + D   W +++     HG  + A
Sbjct: 557 IESA-EKVFTRQEERDIVSWNSMITGYGQHGDAKKA 591



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 140/637 (21%), Positives = 279/637 (43%), Gaps = 88/637 (13%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H Q +K G + +   +  SL+  Y++  DF      F     ++   W+S L  Y +  G
Sbjct: 127 HCQSLKSGFLEDVS-VGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGY-ARNG 184

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              E++ +  ++  +GV         +L           GV+VHA ++K GF+F   +  
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCN 244

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL+  Y K   V  A  +F  +  + D + WN +I        +    ++F  M+ +  K
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMV-VRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303

Query: 394 AISRTIV-KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +SRT+    L+ C++    +  KQ+H  V+K+  E    +   L+  YS+ + ++ A +
Sbjct: 304 -LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362

Query: 453 VFDSMKD--HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           +F SM D  HN+ +W +MI  +      + A  LF +M+   ++P+  T++ +L+G    
Sbjct: 363 LF-SMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG---- 417

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                             +P+               LL    + H  I++   +    V 
Sbjct: 418 ------------------KPSS--------------LLS---QLHAQIIKAYYEKVPSVA 442

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T+L+D YVK   +  +  VF ++  ++IVAW+++++G         A ++  Q+ +E +K
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVK 502

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIH---------------------HMKNSGIYP--- 666
           P+  +++S+++  S    + E    IH                     + K   I     
Sbjct: 503 PNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEK 562

Query: 667 --------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                   ++V+W S+I+G  Q+ + +++L+ F  MQ + +  +  T   +L  C   GL
Sbjct: 563 VFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGL 622

Query: 719 LQNGKEIHCLCLKNGFI-KDAYVATGLIDMYSKSGNLKSAREVFRK---SANKTLASWNC 774
           ++ G++   + +K+  I K     + ++D+YS++G    A ++       A+ T+  W  
Sbjct: 623 VEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTI--WRT 680

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQP-DAITFTAL 810
           ++    ++ N +   L   +L+    QP DA+ +  L
Sbjct: 681 LLAACRVHRNLELGKLAAEKLVS--LQPNDAVGYVLL 715


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/783 (33%), Positives = 429/783 (54%), Gaps = 38/783 (4%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS-RSYADWSS 263
           R L + +  HA+++K G  +  ++ V++ +  +    DF   A   F     R+   W++
Sbjct: 93  RALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAA 152

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +   +   G  ++ L  + E+   GV   + +L  +LK C  L    LG  VH  ++K 
Sbjct: 153 IV-GLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKM 211

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           GF   V +  +L++ YGKC  +E A K+F  + + ++ + WN +I+  ++N   + AI +
Sbjct: 212 GFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVE-KNVVTWNSMIVGYVQNGLNQEAIDV 270

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F +M+    +    T+   L A A + A  EGKQ H   + ++L+               
Sbjct: 271 FYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLD--------------- 315

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
                          D+ L S  S+I+ Y+ +G ++ A  +F++M    ++ D++TWN L
Sbjct: 316 --------------LDNILGS--SIINFYSKVGLIEDAELVFSRM----LEKDVVTWNLL 355

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           +S +  H      L +   M+S   R +  ++S +L A      +K G+E H Y +R  L
Sbjct: 356 ISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNL 415

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           + D+ V  S++DMY K + + +A++VFD+   R++V WN+L++ Y   GL   A K+  Q
Sbjct: 416 ESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQ 475

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M+ + + P+++SWNS++ G+   GQ  EA  +   M++ G  PN++TWT+LISG  Q+  
Sbjct: 476 MQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGF 535

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
             E++ FF +MQ+  I+P+  +++S+L  C  +  L  G+ IH    ++ F     VAT 
Sbjct: 536 GYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS 595

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           L+DMY+K G++  A++VF   ++K L  +N MI  +A++G   EA+ LF  L + G +PD
Sbjct: 596 LVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPD 655

Query: 804 AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
           +ITFT++L+AC ++GLV EG   F  M + +N+ P +EHY C+V LL + G LDEA   I
Sbjct: 656 SITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLI 715

Query: 864 RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
            TMPF+PDA I G+LL +CR H  +E  E  S+ LFKLEP NS NY  + N  A + RW 
Sbjct: 716 LTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWV 775

Query: 924 DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
           +V  +R  M   G++     SWIQ    ++VF A    HP T EIY  L  L+SEM+ +G
Sbjct: 776 EVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMG 835

Query: 984 YVP 986
           YVP
Sbjct: 836 YVP 838



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 253/549 (46%), Gaps = 73/549 (13%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESN 430
           ++   + ++ L  EM+F   +       ++LQ C    A H G+QIH  +LK+      N
Sbjct: 56  KDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKN 115

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
             V   L+  Y++ +  E+A R+F  ++  N+ SW +++     +G+ + A   F +M  
Sbjct: 116 EYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQE 175

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
           + + PD    N +L                         PN      VL+A   L+L+  
Sbjct: 176 NGVFPD----NFVL-------------------------PN------VLKACGSLQLIGL 200

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           G+  HGY+L+ G    ++V +SL+DMY K   L++A++VFD+M  +N+V WNS+I GY  
Sbjct: 201 GKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQ 260

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMKNSGIY 665
            GL   A  +   M  E I+P  V+  S +S  +     I G+   A+ I++ +    I 
Sbjct: 261 NGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNIL 320

Query: 666 --------------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
                                      +VVTW  LIS  +Q+    ++L     M+ E++
Sbjct: 321 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENL 380

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           + +S T+SS+L        ++ GKE HC C++     D  VA  +IDMY+K   +  AR+
Sbjct: 381 RFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARK 440

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VF  +  + L  WN ++  +A  G   EA+ LF+++      P+ I++ +++     +G 
Sbjct: 441 VFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQ 500

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPD-ATIW 875
           V E    F  M +     P +  ++ ++  L ++G+  EA  F + M     +P  A+I 
Sbjct: 501 VNEAKDMFSQMQS-LGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASIT 559

Query: 876 GALLGSCRI 884
             LL    I
Sbjct: 560 SVLLACTDI 568



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 164/650 (25%), Positives = 281/650 (43%), Gaps = 106/650 (16%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG--FDFDVH 330
           G +QE + +  E+  +       I   +L+ C    A   G ++HA ++K G  F  + +
Sbjct: 58  GHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEY 117

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           ++  L+ FY KC   E A +LF  +  + +   W  I+ ++ R    E+A+  F EMQ +
Sbjct: 118 VETKLVVFYAKCDFPEVAVRLFHRLR-VRNVFSWAAIVGLQCRMGFSEDALLGFIEMQEN 176

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                +  +  +L+AC  +     GK +HGYVLK    + + V + L+ MY +   LE A
Sbjct: 177 GVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDA 236

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            +VFDSM + N+ +WNSMI  Y   G    A  +F  M    I+P  +T           
Sbjct: 237 RKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVT----------- 285

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                                   V+  L A   L  L  G++ H   + N LD D  +G
Sbjct: 286 ------------------------VASFLSASANLDALIEGKQGHAIAILNSLDLDNILG 321

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           +S+++ Y K   +++A+ VF  M  +++V WN LIS Y        A  M + M  E ++
Sbjct: 322 SSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLR 381

Query: 631 PDLVSWNSLVSGYSI-----WGQSKEALVIIHHMKNSGIYPN------------------ 667
            D V+ +S++S  ++      G+      I  ++++  +  N                  
Sbjct: 382 FDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKV 441

Query: 668 --------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
                   +V W +L++   Q     E+LK F QMQ + + PN  + +S++     LG L
Sbjct: 442 FDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI-----LGFL 496

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
           +NG+           + +A       DM+S+  +L              L +W  +I G 
Sbjct: 497 RNGQ-----------VNEAK------DMFSQMQSL---------GFQPNLITWTTLISGL 530

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW--KYFDSMSTDYNII 837
           A  G G EAIL F ++ E G +P   + T++L AC +   +   W  +      T +   
Sbjct: 531 AQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTD---IPSLWYGRAIHGFITRHEFC 587

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            ++   + +VD+  K G +DEA      M  K +  I+ A++ +  +HG 
Sbjct: 588 LSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK-ELPIYNAMISAYALHGQ 636



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG- 733
           IS   ++ + +ES+    +M+ ED +        LLQ C     L  G++IH   LKNG 
Sbjct: 51  ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110

Query: 734 -FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            F K+ YV T L+  Y+K    + A  +F +   + + SW  ++      G  ++A+L F
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 170

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            E+ E G  PD      +L AC +  L+  G K              +   S +VD+ GK
Sbjct: 171 IEMQENGVFPDNFVLPNVLKACGSLQLIGLG-KGVHGYVLKMGFGACVFVSSSLVDMYGK 229

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALL 879
            G L++A     +M  + +   W +++
Sbjct: 230 CGVLEDARKVFDSM-VEKNVVTWNSMI 255


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 750

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/665 (35%), Positives = 369/665 (55%), Gaps = 37/665 (5%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N +++ Y+RN +L  A  +FDSM + ++ SWN+M+S Y   G+VD A  +F++M      
Sbjct: 99   NLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP----H 154

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRG------------MQSLGFRPNGSSVSVVLQAV 542
             + I+WN LL+ +   G  +    L               M     R        +   +
Sbjct: 155  KNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQI 214

Query: 543  TELRLLKYGRESHGYILRNGLDY-----------DLYVGTSLMDMYVKNDCLQNAQEVFD 591
                L+ +     GY     L             D++  T+++  YV++  L  A+ VFD
Sbjct: 215  PVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFD 274

Query: 592  NMKNRNIVAWNSLISGYC-FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
             M  +  +++N +I+GY  +K +      M  ++ EE   P++ SWN ++SGY   G   
Sbjct: 275  EMPQKREMSYNVMIAGYAQYKRM-----DMGRELFEEMPFPNIGSWNIMISGYCQNGDLA 329

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            +A  +   M       + V+W ++I+G  QN  Y E++   ++M+++    N +T    L
Sbjct: 330  QARNLFDMMPQR----DSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCAL 385

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              C  +  L+ GK++H   ++ G+ K   V   L+ MY K G +  A +VF+   +K + 
Sbjct: 386  SACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIV 445

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            SWN M+ G+A +G G++A+ +F  ++  G +PD IT   +L+AC ++GL + G +YF SM
Sbjct: 446  SWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSM 505

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
            + DY I P  +HY+CM+DLLG+AG L+EA + IR MPF+PDA  WGALLG+ RIHG++E 
Sbjct: 506  NKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMEL 565

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             E A+  +FK+EP NS  Y L+ NL A S RW DV ++R  M ++GV+    +SW+++  
Sbjct: 566  GEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQN 625

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             +H F+     HP  G IY  L  L  +MK  GYV  T+ V  D++EEEK  +L  H+EK
Sbjct: 626  KIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEK 685

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA+ +G++   S  PIRV+KN RVC DCH A K++S + GR I +RD  R+HHF EG CS
Sbjct: 686  LAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICS 745

Query: 1071 CNDCW 1075
            C D W
Sbjct: 746  CRDYW 750



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 17/391 (4%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           LM  Y K   +  A +LF ++  + D + WN +I    ++     A +LF E   S  + 
Sbjct: 194 LMGGYVKRNMLGDARQLFDQIP-VRDLISWNTMISGYAQDGDLSQARRLFEE---SPVRD 249

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
           +  T   M+ A  + G   E ++    V     +      N +I+ Y++  ++++   +F
Sbjct: 250 VF-TWTAMVYAYVQDGMLDEARR----VFDEMPQKREMSYNVMIAGYAQYKRMDMGRELF 304

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           + M   N+ SWN MIS Y   G +  A +LF+ M     Q D ++W  +++G+  +G Y+
Sbjct: 305 EEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMP----QRDSVSWAAIIAGYAQNGLYE 360

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
             + +L  M+  G   N S+    L A  ++  L+ G++ HG ++R G +    VG +L+
Sbjct: 361 EAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALV 420

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            MY K  C+  A +VF  +++++IV+WN++++GY   G    A  +   M    +KPD +
Sbjct: 421 GMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEI 480

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           +   ++S  S  G +       H M K+ GI PN   +  +I    +     E+      
Sbjct: 481 TMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRN 540

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
           M  E   P++ T  +LL      G ++ G++
Sbjct: 541 MPFE---PDAATWGALLGASRIHGNMELGEQ 568



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 158/382 (41%), Gaps = 78/382 (20%)

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           DL+    ++  Y +N  L++A+ +FD+M  +++V+WN+++SGY   G    A+ + ++M 
Sbjct: 94  DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
            +    + +SWN L++ Y   G+ +EA  +     +      +++   L+ G ++     
Sbjct: 154 HK----NSISWNGLLAAYVRSGRLEEARRLFESKSDW----ELISCNCLMGGYVKRNMLG 205

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           ++ + F Q+   D+   +T +S   Q     G L   + +     +   ++D +  T ++
Sbjct: 206 DARQLFDQIPVRDLISWNTMISGYAQD----GDLSQARRL----FEESPVRDVFTWTAMV 257

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL---------- 795
             Y + G L  AR VF +   K   S+N MI G+A Y        LF E+          
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNI 317

Query: 796 LETGF-----------------QPDAITFTALLAACKNSGLVEEGWKYFDSMSTD----- 833
           + +G+                 Q D++++ A++A    +GL EE       M  D     
Sbjct: 318 MISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLN 377

Query: 834 ------------------------YNIIPTIEHYSCMVD--LLG---KAGYLDEAWDFIR 864
                                     ++ T     C+V   L+G   K G +DEA+D  +
Sbjct: 378 RSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQ 437

Query: 865 TMPFKPDATIWGALLGSCRIHG 886
            +  K D   W  +L     HG
Sbjct: 438 GVQHK-DIVSWNTMLAGYARHG 458



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 4/241 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y + GD   A   F +   R    W++ +  Y    G  +E + +  E+   G   
Sbjct: 318 MISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQ-NGLYEEAMNMLVEMKRDGESL 376

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
                   L  C  + A  LG +VH  +++ G++    +  AL+  Y KC  ++ A  +F
Sbjct: 377 NRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVF 436

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             V   +D + WN ++    R+     A+ +F  M  +  K    T+V +L AC+  G  
Sbjct: 437 QGVQH-KDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLT 495

Query: 413 HEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS 470
             G +  H       +  N     C+I +  R   LE A  +  +M  + + ++W +++ 
Sbjct: 496 DRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLG 555

Query: 471 S 471
           +
Sbjct: 556 A 556



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 21/229 (9%)

Query: 719 LQNGKEIHCLCLKNGF-IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
           ++NG     LC+ +   ++++     +I  Y ++     AR++F K  +K L SWN M+ 
Sbjct: 44  MRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLT 103

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
           G+A     ++A +LF  + E     D +++ A+L+    SG V+E    FD M    +I 
Sbjct: 104 GYARNRRLRDARMLFDSMPEK----DVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSI- 158

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA-SR 896
                ++ ++    ++G L+EA    R    K D   W  +  +C + G+++   +  +R
Sbjct: 159 ----SWNGLLAAYVRSGRLEEA---RRLFESKSD---WELISCNCLMGGYVKRNMLGDAR 208

Query: 897 RLFKLEPCNS-ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
           +LF   P     ++N M++  A      D+ + R   +E  V+ V  W+
Sbjct: 209 QLFDQIPVRDLISWNTMISGYAQDG---DLSQARRLFEESPVRDVFTWT 254



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 57/273 (20%)

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
           P  V     +S +   G    AL +   M       N V++ ++ISG L+N  +  +   
Sbjct: 31  PHTVKCTKAISTHMRNGHCDLALCVFDAMP----LRNSVSYNAMISGYLRNAKFSLARDL 86

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
           F +M                                         KD +    ++  Y++
Sbjct: 87  FDKMPH---------------------------------------KDLFSWNLMLTGYAR 107

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
           +  L+ AR +F     K + SWN M+ G+   G+  EA  +F  +       ++I++  L
Sbjct: 108 NRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP----HKNSISWNGL 163

Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
           LAA   SG +EE  + F+S S D+ +I      +C++    K   L +A      +P + 
Sbjct: 164 LAAYVRSGRLEEARRLFESKS-DWELISC----NCLMGGYVKRNMLGDARQLFDQIPVR- 217

Query: 871 DATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
           D   W  ++      G L  A    RRLF+  P
Sbjct: 218 DLISWNTMISGYAQDGDLSQA----RRLFEESP 246


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 290/913 (31%), Positives = 459/913 (50%), Gaps = 88/913 (9%)

Query: 170  SPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDM 229
            SP  LA   T   +   Q  C  +    L      + +  +K  H  + K G + N    
Sbjct: 11   SPMVLATTTTTKPSLLNQSKCTKATPSSLKNC---KTIDELKMFHRSLTKQG-LDNDVST 66

Query: 230  VKSLIFHYLEFG--DFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGE 284
            +  L+    E G  +  S AK  F   S SY     ++S +  Y S  G   E + ++  
Sbjct: 67   ITKLVARSCELGTRESLSFAKEVF-ENSESYGTCFMYNSLIRGYAS-SGLCNEAILLFLR 124

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            +   G+          L  C K  A   G+++H  ++K G+  D+ ++ +L++FY +C +
Sbjct: 125  MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL-FREMQFSSAKAISRTIVKML 403
            ++SA K+F E+S+  + + W  +I    R +  ++A+ L FR ++       S T+V ++
Sbjct: 185  LDSARKVFDEMSE-RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
             ACAK+     G++++ ++  S +E N  + + L+ MY + N +++A R+FD     NL 
Sbjct: 244  SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
              N+M S+Y   G    A  +FN M  S ++PD I+   +LS                  
Sbjct: 304  LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS---MLSA----------------- 343

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                           + + ++LR + +G+  HGY+LRNG +    +  +L+DMY+K    
Sbjct: 344  ---------------ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
              A  +FD M N+ +V WNS+++GY   G    A +    M E+ I    VSWN+++SG 
Sbjct: 389  DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISG- 443

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPN 702
                                          L+ GSL    + E+++ F  MQ QE +  +
Sbjct: 444  ------------------------------LVQGSL----FEEAIEVFCSMQSQEGVNAD 469

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              TM S+   CG LG L   K I+    KNG   D  + T L+DM+S+ G+ +SA  +F 
Sbjct: 470  GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
               N+ +++W   I   A+ GN + AI LF +++E G +PD + F   L AC + GLV++
Sbjct: 530  SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQ 589

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G + F SM   + + P   HY CMVDLLG+AG L+EA   I  MP +P+  IW +LL +C
Sbjct: 590  GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            R+ G++E A  A+ ++  L P  + +Y L+ N+ A + RW D+ ++R SM E G++    
Sbjct: 650  RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             S IQI    H F++    HP    I   L  +      LG+VPD   V  D+DE+EK  
Sbjct: 710  TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIF 769

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            +L  H+EKLA+ YGL+ +     IR++KN RVCSDCH+ AK+ S V  REI LRD  RFH
Sbjct: 770  MLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFH 829

Query: 1063 HFREGECSCNDCW 1075
            + R+G+CSC D W
Sbjct: 830  YIRQGKCSCGDFW 842


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/817 (32%), Positives = 411/817 (50%), Gaps = 102/817 (12%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC---RDVESANKLFSEVS 356
            +++ C    +F  G  +H  +I  G++ D +L   ++  Y +     D+  A KLF E+ 
Sbjct: 77   LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP 136

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            +  +   WN +I+   R + +  A  +F  M        + T    L+ C  + +   GK
Sbjct: 137  E-RNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 195

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            Q+H  ++    + +  V N LI MY++ +  E   +VFD M + N               
Sbjct: 196  QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQ-------------- 241

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL--GFRPNGSS 534
                                 +TWN ++S     G + + L L   MQ    G +P+  +
Sbjct: 242  ---------------------VTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFT 280

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
             + +L      R    GR+ H +++R  +  ++ V T L+ MY +   L  A+E+F+ M 
Sbjct: 281  FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 340

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY-----SIWGQS 649
             RN  +WNS+I GY   G    A ++  QM+   IKPD  S +S++S       S  G+ 
Sbjct: 341  ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRE 400

Query: 650  KEALVIIHHMKNSGIYP----------------------------NVVTWTSLISGSLQN 681
                ++ + M+  GI                              N   W S+++G    
Sbjct: 401  LHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANK 460

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
               +ES   F++M + DI+ +  TM ++               ++ L L+          
Sbjct: 461  GLKKESFNHFLEMLESDIEYDVLTMVTI---------------VNLLVLE---------- 495

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            T L+DMYSK G +  AR VF     K + SWN MI G++ +G  KEA++L+ E+ + G  
Sbjct: 496  TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY 555

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+ +TF A+L+AC ++GLVEEG + F SM  DYNI    EHY+CMVDLLG+AG L++A +
Sbjct: 556  PNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKE 615

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            F+  MP +P+ + WGALLG+CR+H  ++   +A++RLF+L+P N   Y +M N+ A + R
Sbjct: 616  FVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGR 675

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            W++VE +R  M   GVK     SWI+I+  + +F A    HP T EIY  L HL  + K 
Sbjct: 676  WKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKG 735

Query: 982  LGYVPDTRCVYQ---DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            LGY+PDT  + Q   DI EEE+ + LL H+E+LA+  GL+    ++ IRV KN R+C DC
Sbjct: 736  LGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDC 795

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            HTA K++S + GR I  RD  RFHHF  G+CSC D W
Sbjct: 796  HTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832



 Score =  142 bits (359), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 184/390 (47%), Gaps = 54/390 (13%)

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN---AQEVFDN 592
           S ++Q   +    + G+  H  ++ NG + D Y+ T ++ +Y ++ CL +   A+++F+ 
Sbjct: 75  SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEE 134

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW---------------- 636
           M  RN+ AWN++I  Y     ++ A  + ++M +  + PD  ++                
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGG 194

Query: 637 -------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                              N+L+  Y+     +  L +   M       N VTW S+IS 
Sbjct: 195 KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER----NQVTWNSIISA 250

Query: 678 SLQNENYRESLKFFIQMQQED--IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
             Q  ++ ++L  F++MQ+ +  I+P+  T ++LL  C        G++IH   ++    
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 310

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           K+  V T L+ MYS+ G L  A+E+F + A +   SWN MI G+   G  +EA+ LF ++
Sbjct: 311 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 370

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS----CMVDLLG 851
              G +PD  + +++L++C +    ++G +       ++ +  T+E        +VD+  
Sbjct: 371 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELH-----NFIVRNTMEEEGILQVVLVDMYA 425

Query: 852 KAGYLDEAWD-FIRTMPFKPDATIWGALLG 880
           K G +D AW  + +T+    +  +W ++L 
Sbjct: 426 KCGSMDYAWKVYDQTIKKDRNTALWNSILA 455



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/528 (21%), Positives = 227/528 (42%), Gaps = 66/528 (12%)

Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
            R     K  H+++I  G  +  D  V  +LI  Y +  D  S  K F     R+   W+
Sbjct: 188 LRSRDGGKQVHSKLIACG--FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWN 245

Query: 263 SFLEDYESFGGEVQEL-LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           S +     FG     L L +  +    G+       T +L LC        G ++HA LI
Sbjct: 246 SIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 305

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           +     ++ ++  L++ Y +C  +  A ++F+ +++  +   WN +I    +N + + A+
Sbjct: 306 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE-RNAYSWNSMIEGYQQNGETQEAL 364

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
           +LF++MQ +  K    ++  ML +C  +    +G+++H +++++ +E    +   L+ MY
Sbjct: 365 RLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMY 424

Query: 442 SRNNKLELATRVFDSM--KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           ++   ++ A +V+D    KD N + WNS+++ Y   G    +++ F +M  S I+ D++T
Sbjct: 425 AKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT 484

Query: 500 -----------------------------------------WNCLLSGHFTHGSYQNVLT 518
                                                    WN ++SG+  HG  +  L 
Sbjct: 485 MVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALI 544

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG----TSLM 574
           L   M   G  PN  +   +L A +   L++ G      +     DY++       T ++
Sbjct: 545 LYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE---DYNIEAKAEHYTCMV 601

Query: 575 DMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYC--FKGLFVN--AKKMLNQMEEEEI 629
           D+  +   L++A+E  + M     +  W +L+ G C   K + +   A + L +++ +  
Sbjct: 602 DLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL-GACRVHKDMDMGRLAAQRLFELDPQNP 660

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV-VTWTSLIS 676
            P ++  N     Y+  G+ KE   I   MK  G+  +  V+W  + S
Sbjct: 661 GPYVIMSNI----YAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINS 704



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 3/116 (2%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS---AR 758
           N    SSL+Q C      Q GK IH   + NG+  DAY+ T ++ +Y++SG L     AR
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           ++F +   + L +WN MI+ +A   +  EA  +F  +L+ G  PD  TF + L  C
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVC 185


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/734 (33%), Positives = 401/734 (54%), Gaps = 95/734 (12%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +LQ  + V +  + KQ+H  +L+++L S  S+ + ++S+YS  N L  +  +F+S+    
Sbjct: 11   LLQNPSSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPS-- 67

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                             P  + W  ++  + +HG + + L+   
Sbjct: 68   --------------------------------PPTTLAWKSIIRCYTSHGLFLHSLSFFI 95

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M + G  P+ +    VL++ T ++ L++G   HG I+R G+ +DLY   +LM+MY K  
Sbjct: 96   QMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFW 155

Query: 582  CLQNA-----------------------------QEVFDNMKNRNIVAWNSLISGYCFKG 612
             L+                               ++VF+ M  R+IV+WN++ISG    G
Sbjct: 156  SLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNG 215

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSL---------------VSGYSIW-GQSKEALV-- 654
            +  +A  M+ +M   +++PD  + +S+               + GY+I  G   +  +  
Sbjct: 216  MHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGS 275

Query: 655  --IIHHMKNSGIYPNV-----------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
              I  + K + +  +            ++W S+I+G +QN  + E LKFF QM    IKP
Sbjct: 276  SLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKP 335

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            N  + SS++  C  L  L  GK++H   +++ F  + ++A+ L+DMY+K GN+++AR +F
Sbjct: 336  NHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIF 395

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             K     + SW  MIMG+A++G+  +AI LF  +   G +P+ + F A+L AC ++GLV+
Sbjct: 396  DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 455

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            E WKYF+SM+ DY IIP +EHY+ + DLLG+ G L+EA++FI  M  +P  ++W  LL +
Sbjct: 456  EAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CR+H ++E AE  S++LF ++P N   Y L+ N+ + + RW+D  +LR +M + G+K   
Sbjct: 516  CRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKP 575

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SWI+I   VH F A    HP    I   L  L+ +M++ GYV DT  V  D++EE+K 
Sbjct: 576  ACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKR 635

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
             +L SH+E+LAI +G++ T +   IRV KN RVC DCHTA K++S + GREI +RD +RF
Sbjct: 636  YLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRF 695

Query: 1062 HHFREGECSCNDCW 1075
            HHF++G+CSC D W
Sbjct: 696  HHFKDGKCSCGDFW 709



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 240/534 (44%), Gaps = 79/534 (14%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W S +  Y S G  +  L   + ++   G      +   +LK CT +     G  VH  +
Sbjct: 74  WKSIIRCYTSHGLFLHSL-SFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCI 132

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESAN---KLFSE--VSDL----------------- 358
           I+ G  FD++   ALMN Y K   +E  N   K+F E   SD+                 
Sbjct: 133 IRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKV 192

Query: 359 ------EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
                  D + WN +I    +N   E+A+ + REM  +  +  S T+  +L   A+    
Sbjct: 193 FEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNL 252

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            +GK+IHGY +++  ++++ + + LI MY++  +++ + RVF  +  H+  SWNS+I+  
Sbjct: 253 LKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGC 312

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              G  D     F +M  ++I                                   +PN 
Sbjct: 313 VQNGMFDEGLKFFQQMLIAKI-----------------------------------KPNH 337

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            S S ++ A   L  L  G++ HGYI+R+  D ++++ ++L+DMY K   ++ A+ +FD 
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDK 397

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           M+  ++V+W ++I GY   G   +A  +  +ME E +KP+ V++ ++++  S  G   EA
Sbjct: 398 MELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEA 457

Query: 653 LVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
               + M ++  I P +  + ++     +     E+ +F   M    I+P  +  S+LL 
Sbjct: 458 WKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH---IEPTGSVWSTLLA 514

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKD-----AYVATGLIDMYSKSGNLKSAREV 760
            C     +    E+     K  F  D     AYV   L ++YS +G  K AR++
Sbjct: 515 ACR----VHKNIELAEKVSKKLFTVDPQNIGAYVL--LSNIYSAAGRWKDARKL 562



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 230/515 (44%), Gaps = 64/515 (12%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +++        L   +++ Y     +  +  +F+ +      L W  II     +
Sbjct: 26  QLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             + +++  F +M  S           +L++C  +     G+ +HG +++  +  +L  C
Sbjct: 85  GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144

Query: 435 NCLISMYSRNNKLELAT---RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           N L++MYS+   LE      +VFD  K  ++ S     S Y  LG +   + +  K    
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYY--LGSLRKVFEMMPKR--- 199

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               DI++WN ++SG+  +G +++ L ++R M +   RP+  ++S VL    E   L  G
Sbjct: 200 ----DIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKG 255

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           +E HGY +RNG D D+++G+SL+DMY K   + ++  VF  +   + ++WNS+I+G    
Sbjct: 256 KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 315

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNS--------------------------------- 638
           G+F    K   QM   +IKP+ VS++S                                 
Sbjct: 316 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA 375

Query: 639 --LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             LV  Y+  G  + A  I   M+   +Y ++V+WT++I G   + +  +++  F +M+ 
Sbjct: 376 SALVDMYAKCGNIRTARWIFDKME---LY-DMVSWTAMIMGYALHGHAYDAISLFKRMEV 431

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL------IDMYSK 750
           E +KPN     ++L  C   GL+    +       N   +D  +  GL       D+  +
Sbjct: 432 EGVKPNYVAFMAVLTACSHAGLVDEAWKYF-----NSMTQDYRIIPGLEHYAAVADLLGR 486

Query: 751 SGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGN 784
            G L+ A E         T + W+ ++    ++ N
Sbjct: 487 VGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKN 521



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 132/262 (50%), Gaps = 2/262 (0%)

Query: 245 SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
           S  K F +   R    W++ +      G     L+ V  E+    +   S  L+ +L + 
Sbjct: 188 SLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV-REMGNADLRPDSFTLSSVLPIF 246

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
            + +    G E+H   I+ G+D DV +  +L++ Y KC  V+ + ++F  +    D + W
Sbjct: 247 AEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQ-HDGISW 305

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N II   ++N  ++  +K F++M  +  K    +   ++ ACA +   H GKQ+HGY+++
Sbjct: 306 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           S  + N+ + + L+ MY++   +  A  +FD M+ +++ SW +MI  Y   G+   A SL
Sbjct: 366 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 425

Query: 485 FNKMNSSRIQPDIITWNCLLSG 506
           F +M    ++P+ + +  +L+ 
Sbjct: 426 FKRMEVEGVKPNYVAFMAVLTA 447


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/733 (33%), Positives = 392/733 (53%), Gaps = 67/733 (9%)

Query: 406  CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            C +     + K++H  ++KS       + N LI+ YS+   +  A  VFD M   N  SW
Sbjct: 15   CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            N+M+S+Y+  G +     +F+ M +     D ++WN L+SG+  +GS    +     M  
Sbjct: 75   NTMLSAYSKSGDLSTMQEIFSIMPNR----DGVSWNSLISGYVCYGSVVEAVKTYNSMMK 130

Query: 526  LG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
             G    N  + S +L  V+    +  GR+ HG I++ G    ++VG+SL+DMY K   + 
Sbjct: 131  DGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVS 190

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN---------------------- 622
             A +VFD ++ RN+V +N++I+G    G+  ++K++ +                      
Sbjct: 191  VASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGL 250

Query: 623  ---------QMEEEEIKPDLVSWNSLVS---GYSIWGQSKEA-LVIIHHMKNSGIY---- 665
                      M +E +  D  ++ S+++   G     + KE   +II    N  ++    
Sbjct: 251  EAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSA 310

Query: 666  -----------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                                    NVV+WT+++ G  QN    E+++ F  MQ+  I+P+
Sbjct: 311  LVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPD 370

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              T+ S++ +C  L  L+ G + HC  L +G I    V+  LI +Y K G+++ + ++F 
Sbjct: 371  DFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            + + +   SW  ++ G+A +G   E I LF  +L  G +PDA+TF A+L+AC  +GLVE 
Sbjct: 431  EMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVER 490

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G +YF+SM  D+ IIP  +HY+CM+DL G+AG L+EA +FI  MPF PD+  W  LL SC
Sbjct: 491  GQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSC 550

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            R++G+ E  + A+  L +L+P N A Y L+ ++ A   +W +V +LR  M E G +    
Sbjct: 551  RLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPG 610

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
            +SWI+    V++FSA+    P + +IY EL  L  +M + GYVPD   V  D+++ EK K
Sbjct: 611  FSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMK 670

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            +L  H+EKLAI +GL+      PIRV+KN RVC DCH A KY+S +  REI +RD  RFH
Sbjct: 671  MLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFH 730

Query: 1063 HFREGECSCNDCW 1075
             F++G CSC D W
Sbjct: 731  LFKDGTCSCGDFW 743



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 248/515 (48%), Gaps = 41/515 (7%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           +++ Y K  D+ +  ++FS + +  D + WN +I   +       A+K +  M       
Sbjct: 77  MLSAYSKSGDLSTMQEIFSIMPN-RDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLN 135

Query: 395 ISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           ++R T   ML   +  G    G+QIHG ++K    + + V + L+ MY++   + +A++V
Sbjct: 136 LNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQV 195

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           FD +++ N+  +N+MI+     G V  +  LF+ M     + D I+W  +++G   +G  
Sbjct: 196 FDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMK----ERDSISWTTMITGLIQNGLE 251

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              + L R M+  G   +  +   VL A   LR LK G+E H  I+R+G +++++VG++L
Sbjct: 252 AEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           +DMY K   ++ A+ VF  M N+N+V+W +++ GY   G    A ++   M+   I+PD 
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371

Query: 634 VSWNS---------------------LVSGYSIWGQSKEALVIIH----------HMKNS 662
            +  S                     LVSG   +     AL+ ++           + + 
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDE 431

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
             + + V+WT+L+SG  Q     E++  F +M  + +KP++ T  ++L  C   GL++ G
Sbjct: 432 MSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERG 491

Query: 723 KEIHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFA 780
           ++     LK+ G I  +   T +ID++ ++G L+ A+    K   +     W  ++    
Sbjct: 492 QQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCR 551

Query: 781 IYGNGKEAILLFHELLETGFQPDA--ITFTALLAA 813
           +YGN +        LLE   Q  A  I  +++ AA
Sbjct: 552 LYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAA 586



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 226/524 (43%), Gaps = 71/524 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + GD ++  + F +  +R    W+S +  Y  +G  V E ++ +  +   GV+
Sbjct: 76  TMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYG-SVVEAVKTYNSMMKDGVL 134

Query: 292 FRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
             +RI  + +L L +      LG ++H  ++K GF   V +  +L++ Y K   V  A++
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 351 LFSEVSDL------------------------------EDDLLWNEIIMVKLRNEKWENA 380
           +F EV +                                D + W  +I   ++N     A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           + LFR+M+         T   +L AC  + A  EGK+IH  +++S    N+ V + L+ M
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y +   +  A  VF  M + N+ SW +M+  Y   G+ + A  +F  M  + I+PD    
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPD---- 370

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                  FT GS                         V+ +   L  L+ G + H   L 
Sbjct: 371 ------DFTLGS-------------------------VISSCANLASLEEGAQFHCQALV 399

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
           +GL   + V  +L+ +Y K   ++++ ++FD M  R+ V+W +L+SGY   G       +
Sbjct: 400 SGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDL 459

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSL 679
             +M  + +KPD V++ +++S  S  G  +        M K+ GI P    +T +I    
Sbjct: 460 FERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFG 519

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           +     E+  F  +M      P+S   ++LL +C   G  + GK
Sbjct: 520 RAGRLEEAKNFINKMP---FSPDSIGWATLLSSCRLYGNEEIGK 560



 Score =  116 bits (290), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 138/278 (49%), Gaps = 2/278 (0%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           M  ++I   L  G    + + F     R    W++ +      G E  E ++++ ++  +
Sbjct: 206 MYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA-EAMDLFRDMRQE 264

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G+         +L  C  L A   G E+H  +I+ G++ +V +  AL++ Y KCR V  A
Sbjct: 265 GMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYA 324

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F  +++ ++ + W  +++   +N   E A+++F +MQ +  +    T+  ++ +CA 
Sbjct: 325 EAVFKRMAN-KNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + +  EG Q H   L S L S ++V N LI++Y +   +E + ++FD M   +  SW ++
Sbjct: 384 LASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTAL 443

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +S Y   G  +    LF +M    ++PD +T+  +LS 
Sbjct: 444 VSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSA 481


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/671 (36%), Positives = 373/671 (55%), Gaps = 37/671 (5%)

Query: 437  LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP- 495
            L+S Y+    L+   RVFD+M+  N+  WN M+S Y  +G    +  LF  M    I+  
Sbjct: 2    LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 496  ---------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
                           D+I+WN ++SG+ ++G  +  L + + M  LG   + +++  VL 
Sbjct: 62   RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
               +   L  G+  H   +++  +  +    +L+DMY K   L  A  VF+ M  RN+V+
Sbjct: 122  GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
            W S+I+GY   G    A  +L QME+E +K D+V+  S++   +  G       +  ++K
Sbjct: 182  WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241

Query: 661  NSGIYPNVVTWTSLIS-----GSLQNENYRESLKFFIQMQQEDI----------KPNSTT 705
             + +  N+    +L+      GS++  N       F  M  +DI          KP+S T
Sbjct: 242  ANNMASNLFVCNALMDMYAKCGSMEGAN-----SVFSTMVVKDIISWNTMVGELKPDSRT 296

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
            M+ +L  C  L  L+ GKEIH   L+NG+  D +VA  L+D+Y K G L  AR +F    
Sbjct: 297  MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 356

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
            +K L SW  MI G+ ++G G EAI  F+E+ + G +PD ++F ++L AC +SGL+E+GW+
Sbjct: 357  SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            +F  M  D+NI P +EHY+CMVDLL + G L +A+ FI T+P  PDATIWGALL  CRI+
Sbjct: 417  FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
              +E AE  + R+F+LEP N+  Y L+ N+ A + +WE+V+R+R  + + G++     SW
Sbjct: 477  HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSW 536

Query: 946  IQIDQIVHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            I+I   V++F S   + HP + +I   L  +  +MK+ GY P T+    + DE +K   L
Sbjct: 537  IEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMAL 596

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+EKLA+ +GL+    R  IRV KN RVC DCH  AK+MS    REI LRD  RFHHF
Sbjct: 597  CGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHF 656

Query: 1065 REGECSCNDCW 1075
            ++G CSC   W
Sbjct: 657  KDGYCSCRGFW 667



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 225/500 (45%), Gaps = 62/500 (12%)

Query: 215 AQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
           ++  K+G    S  + K ++   +E     SA++ F     R    W+S +  Y S  G 
Sbjct: 35  SEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVS-NGL 93

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            +  L ++ ++   G+      +  +L  C K     LG  VH+  IK  F+  ++    
Sbjct: 94  TERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNT 153

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ Y KC D++ A ++F ++ +  + + W  +I    R+   + AI L ++M+    K 
Sbjct: 154 LLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKL 212

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               I  +L ACA+ G+   GK +H Y+  + + SNL VCN L+ MY++   +E A  VF
Sbjct: 213 DVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVF 272

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            +M   ++ SWN+M+                       ++PD  T  C            
Sbjct: 273 STMVVKDIISWNTMV---------------------GELKPDSRTMAC------------ 299

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                                  +L A   L  L+ G+E HGYILRNG   D +V  +L+
Sbjct: 300 -----------------------ILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 336

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           D+YVK   L  A+ +FD + ++++V+W  +I+GY   G    A    N+M +  I+PD V
Sbjct: 337 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 396

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           S+ S++   S  G  ++     + MKN   I P +  +  ++    +  N  ++ KF   
Sbjct: 397 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKF--- 453

Query: 694 MQQEDIKPNSTTMSSLLQTC 713
           ++   I P++T   +LL  C
Sbjct: 454 IETLPIAPDATIWGALLCGC 473


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33990;
            AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/816 (32%), Positives = 421/816 (51%), Gaps = 92/816 (11%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            + + CT L +      +HA L+      +V +   L+N Y    +V  A   F  + +  
Sbjct: 60   LFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQN-R 115

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS-RTIVKMLQACAKVGAFHEGKQI 418
            D   WN +I    R       I+ F     SS      RT   +L+AC  V    +G +I
Sbjct: 116  DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKI 172

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            H   LK     ++ V   LI +YSR   +  A  +FD M   ++ S              
Sbjct: 173  HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-------------- 218

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                                 WN ++SG+   G+ +  LTL  G++++       SV+VV
Sbjct: 219  ---------------------WNAMISGYCQSGNAKEALTLSNGLRAM------DSVTVV 251

Query: 539  --LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
              L A TE      G   H Y +++GL+ +L+V   L+D+Y +   L++ Q+VFD M  R
Sbjct: 252  SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS--------------------- 635
            ++++WNS+I  Y      + A  +  +M    I+PD ++                     
Sbjct: 312  DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371

Query: 636  -------W--------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                   W        N++V  Y+  G    A  + + + N+    +V++W ++ISG  Q
Sbjct: 372  GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT----DVISWNTIISGYAQ 427

Query: 681  NENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
            N    E+++ +  M++E +I  N  T  S+L  C   G L+ G ++H   LKNG   D +
Sbjct: 428  NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 487

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            V T L DMY K G L+ A  +F +        WN +I     +G+G++A++LF E+L+ G
Sbjct: 488  VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             +PD ITF  LL+AC +SGLV+EG   F+ M TDY I P+++HY CMVD+ G+AG L+ A
Sbjct: 548  VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
              FI++M  +PDA+IWGALL +CR+HG+++  +IAS  LF++EP +   + L+ N+ A +
Sbjct: 608  LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 667

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
             +WE V+ +R      G++    WS +++D  V VF      HP   E+Y EL  L +++
Sbjct: 668  GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 727

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
            K +GYVPD R V QD++++EK  +L+SH+E+LAI + L+ T ++  IR+ KN RVC DCH
Sbjct: 728  KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 787

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +  K++S +  REI +RD  RFHHF+ G CSC D W
Sbjct: 788  SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 166/644 (25%), Positives = 287/644 (44%), Gaps = 87/644 (13%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L S K  HA+++   +I N     K L+  Y   G+   A   F    +R    W+  + 
Sbjct: 67  LQSAKCLHARLVVSKQIQNVCISAK-LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y   G   + +      +   G+    R    +LK C  ++    G ++H   +K GF 
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM 182

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL--- 383
           +DV++  +L++ Y + + V +A  LF E+  + D   WN +I    ++   + A+ L   
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMP-VRDMGSWNAMISGYCQSGNAKEALTLSNG 241

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
            R M        S T+V +L AC + G F+ G  IH Y +K  LES L V N LI +Y+ 
Sbjct: 242 LRAMD-------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
             +L    +VFD M   +L SWNS+I +Y        A SLF +M  SRIQPD       
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD------- 347

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG- 562
                        LTL+             S++ +L  + ++R     R   G+ LR G 
Sbjct: 348 ------------CLTLI-------------SLASILSQLGDIRAC---RSVQGFTLRKGW 379

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
              D+ +G +++ MY K   + +A+ VF+ + N ++++WN++ISGY   G    A +M N
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439

Query: 623 QMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV------------- 668
            MEEE EI  +  +W S++   S  G  ++ + +   +  +G+Y +V             
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499

Query: 669 ------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
                             V W +LI+    + +  +++  F +M  E +KP+  T  +LL
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559

Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSAREVFRKSANKTL 769
             C   GL+  G+    +   +  I  +    G ++DMY ++G L++A +  +  + +  
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619

Query: 770 AS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           AS W  ++    ++GN     +    L E   +P+ + +  LL+
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEV--EPEHVGYHVLLS 661


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 270/813 (33%), Positives = 421/813 (51%), Gaps = 85/813 (10%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            + + CT L +      +HA L+      +V +   L+N Y    +V  A   F  + +  
Sbjct: 60   LFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHN-R 115

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFHEGKQI 418
            D   WN +I    R       I+ F     SS  +   RT   +L+AC  V    +G +I
Sbjct: 116  DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKI 172

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            H   LK     ++ V   LI +Y R   +  A  +FD M   ++ S              
Sbjct: 173  HCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGS-------------- 218

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                                 WN ++SG+   G+ +  LTL  G++++       SV+VV
Sbjct: 219  ---------------------WNAMISGYCQSGNAKEALTLSDGLRAM------DSVTVV 251

Query: 539  --LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
              L A TE      G   H Y +++GL+ +L+V   L+D+Y +   L++ Q+VFD M  R
Sbjct: 252  SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVR 311

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA---- 652
            ++++WNS+I  Y      + A  +  +M    I+PD ++  SL S  S  G+ +      
Sbjct: 312  DLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQ 371

Query: 653  -----------------LVIIHHMKNSGI---------YPN--VVTWTSLISGSLQNENY 684
                              V++ + K   +          PN  V++W ++ISG  QN   
Sbjct: 372  GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFA 431

Query: 685  RESLKFFIQMQQE--DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
             E+++ +  M++E  +I  N  T  S+L  C   G L+ G ++H   LKNG   D +V T
Sbjct: 432  SEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGT 491

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             L DMY K G L  A  +F +        WN +I     +G+G++A++LF E+L+ G +P
Sbjct: 492  SLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 551

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D ITF  LL+AC +SGLV+EG   F+ M TDY I P+++HY CMVDL G+AG L+ A +F
Sbjct: 552  DHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNF 611

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I++MP +PDA+IWGALL +CR+HG+++  +IAS  LF++EP +   + L+ N+ A + +W
Sbjct: 612  IKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 671

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            E V+ +R      G++    WS +++D  V VF      HP   E+Y EL  L  ++K +
Sbjct: 672  EGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMV 731

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVPD R V QD++++EK  +L+SH+E+LA+ + L+ T ++  IR+ KN RVC DCH+  
Sbjct: 732  GYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVT 791

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K++S +  REI +RD  RFHHF+ G CSC D W
Sbjct: 792  KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 169/630 (26%), Positives = 275/630 (43%), Gaps = 69/630 (10%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L S K  HA+++    I N     K L+  Y   G+   A   F    +R    W+  + 
Sbjct: 67  LQSAKCLHARLVVSNAIQNVCISAK-LVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125

Query: 267 DY--ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
            Y    +  EV     ++  +   G+    R    +LK C  +     G ++H   +K G
Sbjct: 126 GYGRAGYSSEVIRCFSLF--MLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFG 180

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL- 383
           F +DV++  +L++ Y +   V +A  LF E+    D   WN +I    ++   + A+ L 
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPT-RDMGSWNAMISGYCQSGNAKEALTLS 239

Query: 384 --FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
              R M        S T+V +L AC + G F+ G  IH Y +K  LES L V N LI +Y
Sbjct: 240 DGLRAMD-------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           +    L+   +VFD M   +L SWNS+I +Y        A  LF +M  SRIQPD     
Sbjct: 293 AEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPD----- 347

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
                          LTL+             S++ +L  + E+R     R   G+ LR 
Sbjct: 348 --------------CLTLI-------------SLASILSQLGEIRAC---RSVQGFTLRK 377

Query: 562 G-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
           G    D+ +G +++ MY K   + +A+ VF+ + N+++++WN++ISGY   G    A +M
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEM 437

Query: 621 LNQMEEE--EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
            N MEEE  EI  +  +W S++   S  G  ++ + +   +  +G+Y +V   TSL    
Sbjct: 438 YNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMY 497

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            +     ++L  F Q+     + NS   ++L+   G  G  +    +    L  G   D 
Sbjct: 498 GKCGRLDDALSLFYQIP----RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 553

Query: 739 YVATGLIDMYSKSGNLKSAREVFRK-----SANKTLASWNCMIMGFAIYGNGKEAILLFH 793
                L+   S SG +      F           +L  + CM+    +YG   +  +  +
Sbjct: 554 ITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMV---DLYGRAGQLEIALN 610

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEG 823
            +     QPDA  + ALL+AC+  G V+ G
Sbjct: 611 FIKSMPLQPDASIWGALLSACRVHGNVDLG 640


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 285/922 (30%), Positives = 466/922 (50%), Gaps = 90/922 (9%)

Query: 162  HKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMG 221
            H    I  +PTS+ALP  + L    +     +G        K + ++ +K  H+Q+ K G
Sbjct: 6    HLSTLIPATPTSVALPNQNELKILTKHRSSPTG-----SFKKCKTMTELKQLHSQITKNG 60

Query: 222  KIWNSDDMVKSLIFHYLEFGDFTS---AAKAFFLYFSR-----SYADWSSFLEDYESFGG 273
             + +    + +LI    E G F S   A KA  L+        ++  +SS +  + + G 
Sbjct: 61   -LNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGL 119

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              + ++ V+ +L   G +  +     +L  CTK  A   G +VH +++K GF+ D+ ++ 
Sbjct: 120  GYKAIV-VFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVEN 178

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            +L++FYG+C +++   ++F ++S+  + + W  +I    +   ++ A+ LF EM     +
Sbjct: 179  SLIHFYGECGEIDCMRRVFDKMSE-RNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIR 237

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
              S T+V ++ ACAK+     G+Q               VC C+        +LEL    
Sbjct: 238  PNSVTMVGVISACAKLQDLQLGEQ---------------VCTCI-------GELELEV-- 273

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
                   N    N+++  Y   G +D A  +F++     +  +++ +N ++S +   G  
Sbjct: 274  -------NALMVNALVDMYMKCGAIDKARKIFDEC----VDKNLVLYNTIMSNYVRQGLA 322

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            + VL +L  M   G RP+  ++   + A +EL  +  G+  HGY+LRNGL+    V  ++
Sbjct: 323  REVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAI 382

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            ++MY+K    + A  VFD M N+                                     
Sbjct: 383  INMYMKCGKQEMACRVFDRMLNKT-----------------------------------R 407

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
            VSWNSL++G+   G  + A  I   M +S    ++V+W ++I   +Q   ++E+++ F  
Sbjct: 408  VSWNSLIAGFVRNGDMESAWKIFSAMPDS----DLVSWNTMIGALVQESMFKEAIELFRV 463

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            MQ E I  +  TM  +   CG LG L   K IH    K     D ++ T L+DM+++ G+
Sbjct: 464  MQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGD 523

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
             +SA +VF K   + +++W   I   A+ GNG  AI LF E+L+ G +PD + F ALL A
Sbjct: 524  PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTA 583

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
              + GLVE+GW  F SM   Y I P   HY CMVDLLG+AG L EA   I +M  +P+  
Sbjct: 584  LSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDV 643

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            IWG+LL +CR+H +++ A  A+ R+ +L+P  +  + L+ N+ A + RW+DV ++R  + 
Sbjct: 644  IWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLK 703

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            E G   +   S I+I+  +  F+     HP    I   L  +   ++ +GYVPD   V  
Sbjct: 704  EKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLL 763

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D++E+EK  +L  H+EKLAI + L+ T    PIRV KN R+CSDCH+ AK +S    REI
Sbjct: 764  DVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREI 823

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD  RFH F++G CSC D W
Sbjct: 824  IVRDNNRFHFFQQGFCSCGDYW 845


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/829 (30%), Positives = 419/829 (50%), Gaps = 65/829 (7%)

Query: 276  QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
            +E L ++ +LH  G+      L+  LK+C  L    +G +VH   +K GF  DV +  +L
Sbjct: 86   REALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSL 145

Query: 336  MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
            ++ Y K  D E    +F E+  +++ + W  ++    RN   +  I L  +MQ       
Sbjct: 146  VDMYMKTEDFEDGRGIFDEMG-IKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPN 204

Query: 396  SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
              T   +L A A       G Q+H  ++K+  E    VCN LI MY ++  +  A  VFD
Sbjct: 205  GFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFD 264

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            SM                                   +  D +TWN ++ G+   G Y  
Sbjct: 265  SM-----------------------------------VVRDSVTWNIMIGGYAAIGFYLE 289

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
               +   M+  G + + +     L+  ++ R L + ++ H  +++NG ++   + T+LM 
Sbjct: 290  GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349

Query: 576  MYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
             Y K   +  A ++F       N+V W ++I G+        A  +  QM  E ++P+  
Sbjct: 350  TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHF 409

Query: 635  SWNSLVSGY--SIWGQSKEALVIIHHMKNSGIYP-------------------------N 667
            +++++++G   S+  Q    ++  ++ K   +                           +
Sbjct: 410  TYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG-LGLLQNGKEIH 726
            +V W+++++G  Q  +  ++++ FIQ+ +E +KPN  T SS++  C      +++GK+IH
Sbjct: 470  IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               +K+G      V++ L+ MYSK GN++SA +VF +   + + SWN MI G+  +G+ K
Sbjct: 530  ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            +A+ +F  +   G   D +TF  +L AC ++GLVEEG KYF+ M  DY+I    EHYSCM
Sbjct: 590  KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCM 649

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VDL  +AG  D+A D I  MPF    TIW  LL +CR+H +LE  ++A+ +L  L+P ++
Sbjct: 650  VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
              Y L+ N+ A++  WE+   +R  MDE  VK     SWI+I   +  F A    HP + 
Sbjct: 710  VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSD 769

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
             +Y +L  L  ++K +GY PDT  V+ D++EE K  +L  H+E+LAI YGL+     API
Sbjct: 770  LVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPI 829

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++ KN R+C DCH   + +SL+  R + +RD  RFHHF+ G CSC   W
Sbjct: 830  QIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 144/576 (25%), Positives = 261/576 (45%), Gaps = 73/576 (12%)

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A++LF E + L+D   +N ++    RN     A+ LF+++  S       T+   L+ C 
Sbjct: 57  AHQLFDE-TPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +     G+Q+H   LKS    ++SV   L+ MY +    E    +FD M   N+ SW S
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           ++S Y   G  D    L N+M                                   Q  G
Sbjct: 176 LLSGYARNGLNDEVIHLINQM-----------------------------------QMEG 200

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             PNG + + VL A+ +  +++ G + H  I++NG ++  +V  +L+ MY+K++ + +A+
Sbjct: 201 VNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAE 260

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV------- 640
            VFD+M  R+ V WN +I GY   G ++   +M ++M    +K     + + +       
Sbjct: 261 AVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQR 320

Query: 641 --------------SGYSIWGQSKEALVIIHHMKNS-----------GIYPNVVTWTSLI 675
                         +GY      + AL++ +   +S               NVVTWT++I
Sbjct: 321 ELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMI 380

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            G +QN N ++++  F QM +E ++PN  T S++L       L Q    +H   +K  + 
Sbjct: 381 GGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQ----LHAQIIKAYYE 436

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           K   VAT L+D Y K+GN+  +  VF     K + +W+ M+ G A   + ++A+ +F +L
Sbjct: 437 KVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQL 496

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           ++ G +P+  TF++++ AC +S    E  K   + +        +   S ++ +  K G 
Sbjct: 497 VKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGN 556

Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           ++ A + + T   + D   W +++     HG  + A
Sbjct: 557 IESA-EKVFTRQEERDIVSWNSMITGYGQHGDAKKA 591



 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 140/637 (21%), Positives = 279/637 (43%), Gaps = 88/637 (13%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H Q +K G + +   +  SL+  Y++  DF      F     ++   W+S L  Y +  G
Sbjct: 127 HCQSLKSGFLEDVS-VGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGY-ARNG 184

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              E++ +  ++  +GV         +L           GV+VHA ++K GF+F   +  
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCN 244

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL+  Y K   V  A  +F  +  + D + WN +I        +    ++F  M+ +  K
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMV-VRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303

Query: 394 AISRTIV-KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +SRT+    L+ C++    +  KQ+H  V+K+  E    +   L+  YS+ + ++ A +
Sbjct: 304 -LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362

Query: 453 VFDSMKD--HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           +F SM D  HN+ +W +MI  +        A  LF +M+   ++P+  T++ +L+G    
Sbjct: 363 LF-SMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG---- 417

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                             +P+    S++ Q              H  I++   +    V 
Sbjct: 418 ------------------KPS----SLLSQL-------------HAQIIKAYYEKVPSVA 442

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T+L+D YVK   +  +  VF ++  ++IVAW+++++G         A ++  Q+ +E +K
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVK 502

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIH---------------------HMKNSGIYP--- 666
           P+  +++S+++  S    + E    IH                     + K   I     
Sbjct: 503 PNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEK 562

Query: 667 --------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                   ++V+W S+I+G  Q+ + +++L+ F  MQ + +  +  T   +L  C   GL
Sbjct: 563 VFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGL 622

Query: 719 LQNGKEIHCLCLKNGFI-KDAYVATGLIDMYSKSGNLKSAREVFRK---SANKTLASWNC 774
           ++ G++   + +K+  I K     + ++D+YS++G    A ++       A+ T+  W  
Sbjct: 623 VEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTI--WRT 680

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQP-DAITFTAL 810
           ++    ++ N +   L   +L+    QP DA+ +  L
Sbjct: 681 LLAACRVHRNLELGKLAAEKLVS--LQPNDAVGYVLL 715


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 274/883 (31%), Positives = 436/883 (49%), Gaps = 70/883 (7%)

Query: 226  SDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
            SD  V + I H Y  +G  + + K F     R+   W+S +  Y S  GE +E+++++  
Sbjct: 92   SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY-SDKGEPEEVIDIYKG 150

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            + G+GV      +++++  C  L    LG ++   ++K G +  + ++ +L++  G   +
Sbjct: 151  MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            V+ AN +F ++S+  D + WN I     +N   E + ++F  M+    +  S T+  +L 
Sbjct: 211  VDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
                V     G+ IHG V+K   +S + VCN L+ MY+   +   A  VF  M       
Sbjct: 270  VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP------ 323

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                                           D+I+WN L++     G   + L LL  M 
Sbjct: 324  -----------------------------TKDLISWNSLMASFVNDGRSLDALGLLCSMI 354

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            S G   N  + +  L A       + GR  HG ++ +GL Y+  +G +L+ MY K   + 
Sbjct: 355  SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
             ++ V   M  R++VAWN+LI GY        A      M  E +  + ++  S++S   
Sbjct: 415  ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 474

Query: 645  IWGQSKEALVIIH------------HMKNSGIY--------------------PNVVTWT 672
            + G   E    +H            H+KNS I                      N++TW 
Sbjct: 475  LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 534

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            ++++ +  + +  E LK   +M+   +  +  + S  L     L +L+ G+++H L +K 
Sbjct: 535  AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 594

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF  D+++     DMYSK G +    ++   S N++L SWN +I     +G  +E    F
Sbjct: 595  GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 654

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            HE+LE G +P  +TF +LL AC + GLV++G  Y+D ++ D+ + P IEH  C++DLLG+
Sbjct: 655  HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 714

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            +G L EA  FI  MP KP+  +W +LL SC+IHG+L+    A+  L KLEP + + Y L 
Sbjct: 715  SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 774

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + RWEDVE +R  M    +K     SW+++   V  F      HP T EIY +L
Sbjct: 775  SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 834

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              +   +K+ GYV DT    QD DEE+K   L +H+E+LA+ Y LM T   + +R+ KN 
Sbjct: 835  EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 894

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+CSDCH+  K++S V GR I LRD  RFHHF  G CSC D W
Sbjct: 895  RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 184/765 (24%), Positives = 341/765 (44%), Gaps = 119/765 (15%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y +FG    A   F +   R+   W++ +      G  + E +E + ++   G+   S +
Sbjct: 2   YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYL-EGMEFFRKMCDLGIKPSSFV 60

Query: 297 LTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           +  ++  C +  + F  GV+VH  + K G   DV++  A+++ YG    V  + K+F E+
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            D  + + W  +++      + E  I +++ M+         ++  ++ +C  +     G
Sbjct: 121 PD-RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +QI G V+KS LES L+V N LISM      ++ A  +FD M + +  SWNS+ ++Y   
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G+++ ++ +F+ M   R   ++                                 N ++V
Sbjct: 240 GHIEESFRIFSLMR--RFHDEV---------------------------------NSTTV 264

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           S +L  +  +   K+GR  HG +++ G D  + V  +L+ MY        A  VF  M  
Sbjct: 265 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 324

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQM-------------------------EEEEIK 630
           +++++WNSL++ +   G  ++A  +L  M                         E+  I 
Sbjct: 325 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384

Query: 631 PDLVS----------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
             LV            N+LVS Y   G+  E+  ++  M       +VV W +LI G  +
Sbjct: 385 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR----DVVAWNALIGGYAE 440

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG-LLQNGKEIHCLCLKNGFIKDAY 739
           +E+  ++L  F  M+ E +  N  T+ S+L  C   G LL+ GK +H   +  GF  D +
Sbjct: 441 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 500

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
           V   LI MY+K G+L S++++F    N+ + +WN M+   A +G+G+E + L  ++   G
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560

Query: 800 FQPDAITFTALLAACKNSGLVEEGWKY---------------FDSMSTDYN--------- 835
              D  +F+  L+A     ++EEG +                F++ +  Y+         
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 620

Query: 836 -IIP-----TIEHYSCMVDLLGKAGYLDE---AWDFIRTMPFKPDATIWGALLGSCRIHG 886
            ++P     ++  ++ ++  LG+ GY +E    +  +  M  KP    + +LL +C  HG
Sbjct: 621 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS-HG 679

Query: 887 -----HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
                 L Y ++ +R  F LEP    +   +++LL  S R  + E
Sbjct: 680 GLVDKGLAYYDMIARD-FGLEPA-IEHCICVIDLLGRSGRLAEAE 722



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 210/477 (44%), Gaps = 77/477 (16%)

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY++  +++ A  +FD M   N  SWN+M+S     G V V                   
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMS-----GIVRV------------------- 36

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL-RLLKYGRESHGYI 558
                      G Y   +   R M  LG +P+   ++ ++ A      + + G + HG++
Sbjct: 37  -----------GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG------ 612
            ++GL  D+YV T+++ +Y     +  +++VF+ M +RN+V+W SL+ GY  KG      
Sbjct: 86  AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 145

Query: 613 -------------------LFVNA----------KKMLNQMEEEEIKPDLVSWNSLVSGY 643
                              L +++          ++++ Q+ +  ++  L   NSL+S  
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 205

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
              G    A  I   M       + ++W S+ +   QN +  ES + F  M++   + NS
Sbjct: 206 GSMGNVDYANYIFDQMSER----DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 261

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
           TT+S+LL   G +   + G+ IH L +K GF     V   L+ MY+ +G    A  VF++
Sbjct: 262 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 321

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              K L SWN ++  F   G   +A+ L   ++ +G   + +TFT+ LAAC      E+G
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            +    +     +       + +V + GK G + E+   +  MP + D   W AL+G
Sbjct: 382 -RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 436


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/617 (38%), Positives = 356/617 (57%), Gaps = 39/617 (6%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            QP+I  WN ++ G  ++  + + +     M+S GF PN  +   VL+A   L  L+ G +
Sbjct: 74   QPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVK 133

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             H  +++ G D D++V TSL+ +Y K   L++A +VFD++ ++N+V+W ++ISGY   G 
Sbjct: 134  IHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGK 193

Query: 614  FVNAKKMLNQMEEEEIKPDLVS------------------W-----------------NS 638
            F  A  M  ++ E  + PD  +                  W                  S
Sbjct: 194  FREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTS 253

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            LV  Y+  G  ++A  +   M       ++V+W ++I G   N   +E++  F+QMQ+E+
Sbjct: 254  LVDMYAKCGNMEKARSVFDGMPEK----DIVSWGAMIQGYALNGLPKEAIDLFLQMQREN 309

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            +KP+  T+  +L  C  LG L+ G+ +  L  +N F+ +  + T LID+Y+K G++  A 
Sbjct: 310  VKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAW 369

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            EVF+    K    WN +I G A+ G  K +  LF ++ + G +PD  TF  LL  C ++G
Sbjct: 370  EVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAG 429

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            LV+EG +YF+SM   +++ P+IEHY CMVDLLG+AG LDEA   IR MP + +A +WGAL
Sbjct: 430  LVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGAL 489

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            LG+CRIH   + AE+A ++L +LEP NS NY L+ N+ + + +W++  ++R SM+E  ++
Sbjct: 490  LGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQ 549

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                 SWI++D IVH F      HP + +IY +L  L  +MK  GYVP T  V  DI+EE
Sbjct: 550  KPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEE 609

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            EK   L  H+EKLAI +GL+     A IRV+KN RVC DCH A K +S + GREI +RD 
Sbjct: 610  EKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDN 669

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFH FREG CSCND W
Sbjct: 670  NRFHCFREGSCSCNDYW 686



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 36/377 (9%)

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
            + +E +G +  +G +  +     +LK C +L+   LGV++H  ++K GFD DV +K +L
Sbjct: 94  DDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSL 153

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
           +  Y KC  +E A+K+F ++ D ++ + W  II   +   K+  AI +FR +   +    
Sbjct: 154 VCLYAKCGYLEDAHKVFDDIPD-KNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPD 212

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           S TIV++L AC ++G  + G+ IH  +++  +  N+ V   L+ MY++   +E A  VFD
Sbjct: 213 SFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFD 272

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            M + ++ SW +MI  Y   G    A  LF +M    ++PD  T                
Sbjct: 273 GMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYT---------------- 316

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
                              V  VL A   L  L+ G    G + RN   Y+  +GT+L+D
Sbjct: 317 -------------------VVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALID 357

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           +Y K   +  A EVF  MK ++ V WN++ISG    G    +  +  Q+E+  IKPD  +
Sbjct: 358 LYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNT 417

Query: 636 WNSLVSGYSIWGQSKEA 652
           +  L+ G +  G   E 
Sbjct: 418 FIGLLCGCTHAGLVDEG 434



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 122/232 (52%), Gaps = 6/232 (2%)

Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
           + H +K     PN+  W ++I G + N+ + ++++F+  M+ E   PN+ T   +L+ C 
Sbjct: 68  LFHQIKQ----PNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACA 123

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
            L  LQ G +IH L +K GF  D +V T L+ +Y+K G L+ A +VF    +K + SW  
Sbjct: 124 RLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTA 183

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
           +I G+   G  +EAI +F  LLE    PD+ T   +L+AC   G +  G ++      + 
Sbjct: 184 IISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG-EWIHKCIMEM 242

Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            ++  +   + +VD+  K G +++A      MP K D   WGA++    ++G
Sbjct: 243 GMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEK-DIVSWGAMIQGYALNG 293


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/802 (32%), Positives = 400/802 (49%), Gaps = 124/802 (15%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN +I   ++  + ++AI +   M  +  +    T+  +L+AC ++ ++  G   HG + 
Sbjct: 130  WNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLIC 189

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             +  ESN+ +CN L++MYSR   LE A+ +FD +    +                     
Sbjct: 190  CNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID-------------------- 229

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM------QSLGFRPNGSSVSV 537
                        D+I+WN ++S H    +    L L   M      +    R +  S+  
Sbjct: 230  ------------DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD------ 591
            +L A   L+ +   +E HG  +RNG   D++VG +L+D Y K   ++NA +VF+      
Sbjct: 278  ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337

Query: 592  -------------------------NMKNRNI----VAWNSLISGYCFKGLFVNAKKMLN 622
                                     NM+  NI    V W ++I+GY  +G    A  +  
Sbjct: 338  VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397

Query: 623  QM--------------------------EEEEIKP-------------------DLVSWN 637
            QM                          +  EI                     DL+ +N
Sbjct: 398  QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            +L+  YS     K A  I   +       NVVTWT +I G  Q  +  ++LK F++M  E
Sbjct: 458  ALIDMYSKCRSFKAARSIFDDIPLE--ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 515

Query: 698  D--IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA--YVATGLIDMYSKSGN 753
               + PN+ T+S +L  C  L  ++ GK+IH   L++   + +  +VA  LIDMYSK G+
Sbjct: 516  PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 575

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            + +AR VF   + K+  SW  M+ G+ ++G G EA+ +F ++ + GF PD ITF  +L A
Sbjct: 576  VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 635

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C + G+V++G  YFDSMS DY + P  EHY+C +DLL ++G LD+AW  ++ MP +P A 
Sbjct: 636  CSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAV 695

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            +W ALL +CR+H ++E AE A  +L ++   N  +Y L+ N+ A + RW+DV R+RH M 
Sbjct: 696  VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 755

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            + G+K     SW+Q  +    F      HP + +IY  L  L+  +K +GYVP+T     
Sbjct: 756  KSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 815

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D+DEEEK  +L+ H+EKLA+ YGL+ T    PIR+ KN RVC DCH+A  Y+S +   EI
Sbjct: 816  DVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEI 875

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD +RFHHF+ G CSC   W
Sbjct: 876  VVRDPSRFHHFKNGSCSCGGYW 897



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 254/565 (44%), Gaps = 57/565 (10%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +LK C +L ++  G   H  +   GF+ +V +  AL+  Y +C  +E A+ +F E++
Sbjct: 165 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 224

Query: 357 D--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQF------SSAKAISRTIVKMLQACAK 408
              ++D + WN I+   +++     A+ LF +M        ++ ++   +IV +L AC  
Sbjct: 225 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 284

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A  + K++HG  +++    ++ V N LI  Y++   +E A +VF+ M+  ++ SWN+M
Sbjct: 285 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 344

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           ++ Y+  G  + A+ LF  M    I  D++TW  +++G+   G     L L R M   G 
Sbjct: 345 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 404

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRN----------GLDYDLYVGTSLMDMYV 578
            PN  ++  VL A   L     G E H Y L+N          G D DL V  +L+DMY 
Sbjct: 405 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 464

Query: 579 KNDCLQNAQEVFDN--MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE--IKPDLV 634
           K    + A+ +FD+  ++ RN+V W  +I G+   G   +A K+  +M  E   + P+  
Sbjct: 465 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 524

Query: 635 SWNSLVSGYSIW-----GQSKEALVIIHHMKNSGIY------------------------ 665
           + + ++   +       G+   A V+ HH   S  Y                        
Sbjct: 525 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 584

Query: 666 ----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                + ++WTS+++G   +    E+L  F +M++    P+  T   +L  C   G++  
Sbjct: 585 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 644

Query: 722 G-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWNCMIMGF 779
           G      +    G    A      ID+ ++SG L  A R V       T   W  ++   
Sbjct: 645 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 704

Query: 780 AIYGNGKEAILLFHELLETGFQPDA 804
            ++ N + A    ++L+E   + D 
Sbjct: 705 RVHSNVELAEHALNKLVEMNAENDG 729



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 214/510 (41%), Gaps = 97/510 (19%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +++SY   G  D A  +  ++  S      + WN L+  H   G   + + +   M   G
Sbjct: 102 VVASYLACGATDYALLVLERVTPS----PAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            RP+  ++  VL+A  EL   + G   HG I  NG + ++++  +L+ MY +   L+ A 
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217

Query: 588 EVFDNMKNR---NIVAWNSLISGYCFKGLFVNAKKMLNQM-------------------- 624
            +FD +  R   ++++WNS++S +        A  + ++M                    
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277

Query: 625 ------------EEEEIK---------PDLVSWNSLVSGYSIWGQSKEALVIIH------ 657
                       + +E+          PD+   N+L+  Y+  G  + A+ + +      
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337

Query: 658 -------------------------HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
                                    +M+   I  +VVTWT++I+G  Q     E+L  F 
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN----------GFIKDAYVAT 742
           QM      PN  T+ S+L  C  LG    G EIH   LKN          G  +D  V  
Sbjct: 398 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457

Query: 743 GLIDMYSKSGNLKSAREVFRKSA--NKTLASWNCMIMGFAIYGNGKEAILLFHELLET-- 798
            LIDMYSK  + K+AR +F       + + +W  MI G A YG+  +A+ LF E++    
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY--SCMVDLLGKAGYL 856
           G  P+A T + +L AC +   +  G K   +    ++   +  ++  +C++D+  K G +
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIG-KQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 576

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           D A     +M  K  A  W +++    +HG
Sbjct: 577 DTARHVFDSMSQK-SAISWTSMMTGYGMHG 605



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 206/481 (42%), Gaps = 89/481 (18%)

Query: 285 LHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
           +H K    RS I++I  IL  C  L A     EVH + I+ G   DV +  AL++ Y KC
Sbjct: 261 VHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKC 320

Query: 343 RDVESANKLFSEVSDLEDDLLWNEII------------MVKLRNEKWEN----------- 379
             +E+A K+F+ + + +D + WN ++                +N + EN           
Sbjct: 321 GLMENAVKVFN-MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAV 379

Query: 380 ------------AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
                       A+ LFR+M FS +     TI+ +L ACA +GAF +G +IH Y LK+ L
Sbjct: 380 IAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCL 439

Query: 428 ----------ESNLSVCNCLISMYSRNNKLELATRVFDS--MKDHNLSSWNSMISSYTGL 475
                     + +L V N LI MYS+    + A  +FD   +++ N+ +W  MI  +   
Sbjct: 440 LTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQY 499

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G  + A  LF +M S                                 +  G  PN  ++
Sbjct: 500 GDSNDALKLFVEMIS---------------------------------EPYGVAPNAYTI 526

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGL--DYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           S +L A   L  ++ G++ H Y+LR+        +V   L+DMY K   +  A+ VFD+M
Sbjct: 527 SCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 586

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
             ++ ++W S+++GY   G    A  + ++M +    PD +++  ++   S  G   + L
Sbjct: 587 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL 646

Query: 654 VIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                M  + G+ P    +   I    ++    ++ +    M  E   P +    +LL  
Sbjct: 647 SYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPME---PTAVVWVALLSA 703

Query: 713 C 713
           C
Sbjct: 704 C 704



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 174/421 (41%), Gaps = 54/421 (12%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  Y   G    E L ++ ++   G +     +  +L  C  L AF  G E+HA  
Sbjct: 376 WTAVIAGYSQRGCS-HEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYS 434

Query: 321 IKR----------GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIM 369
           +K           G D D+ +  AL++ Y KCR  ++A  +F ++   E +++ W  +I 
Sbjct: 435 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 494

Query: 370 VKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
              +     +A+KLF EM  +       + TI  +L ACA + A   GKQIH YVL+   
Sbjct: 495 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHR 554

Query: 428 --ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
              S   V NCLI MYS+   ++ A  VFDSM   +  SW SM++ Y   G    A  +F
Sbjct: 555 YESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 614

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAVTE 544
           +KM  +   PD IT+  +L      G     L+    M +  G  P     +  +     
Sbjct: 615 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAI----- 669

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNS 603
                                         D+  ++  L  A     +M      V W +
Sbjct: 670 ------------------------------DLLARSGRLDKAWRTVKDMPMEPTAVVWVA 699

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           L+S          A+  LN++ E   + D  S+  + + Y+  G+ K+   I H MK SG
Sbjct: 700 LLSACRVHSNVELAEHALNKLVEMNAEND-GSYTLISNIYATAGRWKDVARIRHLMKKSG 758

Query: 664 I 664
           I
Sbjct: 759 I 759


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/802 (32%), Positives = 400/802 (49%), Gaps = 124/802 (15%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN +I   ++  + ++AI +   M  +  +    T+  +L+AC ++ ++  G   HG + 
Sbjct: 123  WNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLIC 182

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             +  ESN+ +CN L++MYSR   LE A+ +FD +    +                     
Sbjct: 183  CNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID-------------------- 222

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM------QSLGFRPNGSSVSV 537
                        D+I+WN ++S H    +    L L   M      +    R +  S+  
Sbjct: 223  ------------DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD------ 591
            +L A   L+ +   +E HG  +RNG   D++VG +L+D Y K   ++NA +VF+      
Sbjct: 271  ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330

Query: 592  -------------------------NMKNRNI----VAWNSLISGYCFKGLFVNAKKMLN 622
                                     NM+  NI    V W ++I+GY  +G    A  +  
Sbjct: 331  VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390

Query: 623  QM--------------------------EEEEIKP-------------------DLVSWN 637
            QM                          +  EI                     DL+ +N
Sbjct: 391  QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            +L+  YS     K A  I   +       NVVTWT +I G  Q  +  ++LK F++M  E
Sbjct: 451  ALIDMYSKCRSFKAARSIFDDIPLE--ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 508

Query: 698  D--IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA--YVATGLIDMYSKSGN 753
               + PN+ T+S +L  C  L  ++ GK+IH   L++   + +  +VA  LIDMYSK G+
Sbjct: 509  PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 568

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            + +AR VF   + K+  SW  M+ G+ ++G G EA+ +F ++ + GF PD ITF  +L A
Sbjct: 569  VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 628

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C + G+V++G  YFDSMS DY + P  EHY+C +DLL ++G LD+AW  ++ MP +P A 
Sbjct: 629  CSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAV 688

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            +W ALL +CR+H ++E AE A  +L ++   N  +Y L+ N+ A + RW+DV R+RH M 
Sbjct: 689  VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 748

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            + G+K     SW+Q  +    F      HP + +IY  L  L+  +K +GYVP+T     
Sbjct: 749  KSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 808

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D+DEEEK  +L+ H+EKLA+ YGL+ T    PIR+ KN RVC DCH+A  Y+S +   EI
Sbjct: 809  DVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEI 868

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD +RFHHF+ G CSC   W
Sbjct: 869  VVRDPSRFHHFKNGSCSCGGYW 890



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 254/565 (44%), Gaps = 57/565 (10%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +LK C +L ++  G   H  +   GF+ +V +  AL+  Y +C  +E A+ +F E++
Sbjct: 158 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 217

Query: 357 D--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQF------SSAKAISRTIVKMLQACAK 408
              ++D + WN I+   +++     A+ LF +M        ++ ++   +IV +L AC  
Sbjct: 218 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 277

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A  + K++HG  +++    ++ V N LI  Y++   +E A +VF+ M+  ++ SWN+M
Sbjct: 278 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 337

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           ++ Y+  G  + A+ LF  M    I  D++TW  +++G+   G     L L R M   G 
Sbjct: 338 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 397

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRN----------GLDYDLYVGTSLMDMYV 578
            PN  ++  VL A   L     G E H Y L+N          G D DL V  +L+DMY 
Sbjct: 398 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 457

Query: 579 KNDCLQNAQEVFDN--MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE--IKPDLV 634
           K    + A+ +FD+  ++ RN+V W  +I G+   G   +A K+  +M  E   + P+  
Sbjct: 458 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 517

Query: 635 SWNSLVSGYSIW-----GQSKEALVIIHHMKNSGIY------------------------ 665
           + + ++   +       G+   A V+ HH   S  Y                        
Sbjct: 518 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 577

Query: 666 ----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                + ++WTS+++G   +    E+L  F +M++    P+  T   +L  C   G++  
Sbjct: 578 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 637

Query: 722 G-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWNCMIMGF 779
           G      +    G    A      ID+ ++SG L  A R V       T   W  ++   
Sbjct: 638 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 697

Query: 780 AIYGNGKEAILLFHELLETGFQPDA 804
            ++ N + A    ++L+E   + D 
Sbjct: 698 RVHSNVELAEHALNKLVEMNAENDG 722



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 214/510 (41%), Gaps = 97/510 (19%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +++SY   G  D A  +  ++  S      + WN L+  H   G   + + +   M   G
Sbjct: 95  VVASYLACGATDYALLVLERVTPS----PAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            RP+  ++  VL+A  EL   + G   HG I  NG + ++++  +L+ MY +   L+ A 
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210

Query: 588 EVFDNMKNR---NIVAWNSLISGYCFKGLFVNAKKMLNQM-------------------- 624
            +FD +  R   ++++WNS++S +        A  + ++M                    
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270

Query: 625 ------------EEEEIK---------PDLVSWNSLVSGYSIWGQSKEALVIIH------ 657
                       + +E+          PD+   N+L+  Y+  G  + A+ + +      
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330

Query: 658 -------------------------HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
                                    +M+   I  +VVTWT++I+G  Q     E+L  F 
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN----------GFIKDAYVAT 742
           QM      PN  T+ S+L  C  LG    G EIH   LKN          G  +D  V  
Sbjct: 391 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450

Query: 743 GLIDMYSKSGNLKSAREVFRKSA--NKTLASWNCMIMGFAIYGNGKEAILLFHELLET-- 798
            LIDMYSK  + K+AR +F       + + +W  MI G A YG+  +A+ LF E++    
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY--SCMVDLLGKAGYL 856
           G  P+A T + +L AC +   +  G K   +    ++   +  ++  +C++D+  K G +
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIG-KQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 569

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           D A     +M  K  A  W +++    +HG
Sbjct: 570 DTARHVFDSMSQK-SAISWTSMMTGYGMHG 598



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 206/481 (42%), Gaps = 89/481 (18%)

Query: 285 LHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
           +H K    RS I++I  IL  C  L A     EVH + I+ G   DV +  AL++ Y KC
Sbjct: 254 VHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKC 313

Query: 343 RDVESANKLFSEVSDLEDDLLWNEII------------MVKLRNEKWEN----------- 379
             +E+A K+F+ + + +D + WN ++                +N + EN           
Sbjct: 314 GLMENAVKVFN-MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAV 372

Query: 380 ------------AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
                       A+ LFR+M FS +     TI+ +L ACA +GAF +G +IH Y LK+ L
Sbjct: 373 IAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCL 432

Query: 428 ----------ESNLSVCNCLISMYSRNNKLELATRVFDS--MKDHNLSSWNSMISSYTGL 475
                     + +L V N LI MYS+    + A  +FD   +++ N+ +W  MI  +   
Sbjct: 433 LTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQY 492

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G  + A  LF +M S                                 +  G  PN  ++
Sbjct: 493 GDSNDALKLFVEMIS---------------------------------EPYGVAPNAYTI 519

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGL--DYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           S +L A   L  ++ G++ H Y+LR+        +V   L+DMY K   +  A+ VFD+M
Sbjct: 520 SCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 579

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
             ++ ++W S+++GY   G    A  + ++M +    PD +++  ++   S  G   + L
Sbjct: 580 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL 639

Query: 654 VIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                M  + G+ P    +   I    ++    ++ +    M  E   P +    +LL  
Sbjct: 640 SYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPME---PTAVVWVALLSA 696

Query: 713 C 713
           C
Sbjct: 697 C 697



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 174/421 (41%), Gaps = 54/421 (12%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  Y   G    E L ++ ++   G +     +  +L  C  L AF  G E+HA  
Sbjct: 369 WTAVIAGYSQRGCS-HEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYS 427

Query: 321 IKR----------GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIM 369
           +K           G D D+ +  AL++ Y KCR  ++A  +F ++   E +++ W  +I 
Sbjct: 428 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 487

Query: 370 VKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
              +     +A+KLF EM  +       + TI  +L ACA + A   GKQIH YVL+   
Sbjct: 488 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHR 547

Query: 428 --ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
              S   V NCLI MYS+   ++ A  VFDSM   +  SW SM++ Y   G    A  +F
Sbjct: 548 YESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 607

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAVTE 544
           +KM  +   PD IT+  +L      G     L+    M +  G  P     +  +     
Sbjct: 608 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAI----- 662

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNS 603
                                         D+  ++  L  A     +M      V W +
Sbjct: 663 ------------------------------DLLARSGRLDKAWRTVKDMPMEPTAVVWVA 692

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           L+S          A+  LN++ E   + D  S+  + + Y+  G+ K+   I H MK SG
Sbjct: 693 LLSACRVHSNVELAEHALNKLVEMNAEND-GSYTLISNIYATAGRWKDVARIRHLMKKSG 751

Query: 664 I 664
           I
Sbjct: 752 I 752


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/760 (33%), Positives = 408/760 (53%), Gaps = 76/760 (10%)

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F EV  +E  L WN ++    ++  +  +I LF++M  S  +  S T   + ++ + + +
Sbjct: 1    FDEVK-IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 59

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
             H G+Q+HG++LKS      SV N L++ Y +N +                         
Sbjct: 60   VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR------------------------- 94

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                  VD A  +F++M     + D+I+WN +++G+ ++G  +  L++   M   G   +
Sbjct: 95   ------VDSARKVFDEMT----ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 144

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             +++  V     + RL+  GR  H   ++     +     +L+DMY K   L +A+ VF 
Sbjct: 145  LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 204

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS---------------- 635
             M +R++V++ S+I+GY  +GL   A K+  +MEEE I PD+ +                
Sbjct: 205  EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 264

Query: 636  ------W-------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                  W             N+L+  Y+  G  +EA ++   M+      ++++W ++I 
Sbjct: 265  GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR----VKDIISWNTIIG 320

Query: 677  GSLQNENYRESLKFF-IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            G  +N    E+L  F + ++++   P+  T++ +L  C  L     G+EIH   ++NG+ 
Sbjct: 321  GYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF 380

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             D +VA  L+DMY+K G L  A  +F   A+K L SW  MI G+ ++G GKEAI LF+++
Sbjct: 381  SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 440

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
             + G + D I+F +LL AC +SGLV+EGW++F+ M  +  I PT+EHY+C+VD+L + G 
Sbjct: 441  RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGD 500

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L +A+ FI  MP  PDATIWGALL  CRIH  ++ AE  + ++F+LEP N+  Y LM N+
Sbjct: 501  LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 560

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A + +WE V+RLR  + + G++     SWI+I   V++F A  + +P T  I   L  +
Sbjct: 561  YAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 620

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
             + M + GY P T+    D +E EK + L  H+EKLA+  G++ +     IRV KN RVC
Sbjct: 621  RARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVC 680

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH  AK+MS +  REI LRD  RFH F++G CSC   W
Sbjct: 681  GDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 235/527 (44%), Gaps = 47/527 (8%)

Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAA 247
            SC+S  F      +  R +   +  H  ++K G     + +  SL+  YL+     SA 
Sbjct: 47  FSCVSKSF------SSLRSVHGGEQLHGFILKSG-FGERNSVGNSLVAFYLKNQRVDSAR 99

Query: 248 KAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL 307
           K F     R    W+S +  Y S  G  ++ L V+ ++   G+      +  +   C   
Sbjct: 100 KVFDEMTERDVISWNSIINGYVS-NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 158

Query: 308 MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
               LG  VH+  +K  F  +      L++ Y KC D++SA  +F E+SD    + +  +
Sbjct: 159 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVSYTSM 217

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I    R      A+KLF EM+         T+  +L  CA+     EGK++H ++ ++ L
Sbjct: 218 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 277

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             ++ V N L+ MY++   ++ A  VF  M+  ++ SWN++I  Y+   Y + A SLFN 
Sbjct: 278 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 337

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           +                                  ++   F P+  +V+ VL A   L  
Sbjct: 338 L----------------------------------LEEKRFSPDERTVACVLPACASLSA 363

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
              GRE HGYI+RNG   D +V  SL+DMY K   L  A  +FD++ ++++V+W  +I+G
Sbjct: 364 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 423

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYP 666
           Y   G    A  + NQM +  I+ D +S+ SL+   S  G   E     + M++   I P
Sbjct: 424 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 483

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            V  +  ++    +  +  ++ +F   M    I P++T   +LL  C
Sbjct: 484 TVEHYACIVDMLARTGDLIKAYRFIENMP---IPPDATIWGALLCGC 527



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 250/579 (43%), Gaps = 82/579 (14%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+    + ++ ++   GV   S   + + K  + L +   G ++H  ++K GF     + 
Sbjct: 23  GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 82

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L+ FY K + V+SA K+F E+++  D + WN II   + N   E  + +F +M  S  
Sbjct: 83  NSLVAFYLKNQRVDSARKVFDEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 141

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +    TIV +   CA       G+ +H   +K+        CN L+ MYS+   L+ A  
Sbjct: 142 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 201

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VF  M D ++ S+ SMI+ Y   G    A  LF +M    I PD+ T             
Sbjct: 202 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT------------- 248

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                 V+ VL      RLL  G+  H +I  N L +D++V  +
Sbjct: 249 ----------------------VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 286

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN-AKKMLN-QMEEEEIK 630
           LMDMY K   +Q A+ VF  M+ ++I++WN++I GY  K  + N A  + N  +EE+   
Sbjct: 287 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS-KNCYANEALSLFNLLLEEKRFS 345

Query: 631 PDLVS-----------------------------------WNSLVSGYSIWGQSKEALVI 655
           PD  +                                    NSLV  Y+  G    AL++
Sbjct: 346 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG----ALLL 401

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
            H + +     ++V+WT +I+G   +   +E++  F QM+Q  I+ +  +  SLL  C  
Sbjct: 402 AHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSH 461

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNL-KSAREVFRKSANKTLASWN 773
            GL+  G     +      I+        ++DM +++G+L K+ R +           W 
Sbjct: 462 SGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWG 521

Query: 774 CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            ++ G  I+ + K A  +  ++ E   +P+   +  L+A
Sbjct: 522 ALLCGCRIHHDVKLAEKVAEKVFE--LEPENTGYYVLMA 558


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Brachypodium distachyon]
          Length = 747

 Score =  451 bits (1160), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/645 (36%), Positives = 365/645 (56%), Gaps = 39/645 (6%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
             S++ +Y   G +  A+ +F++M+    + D+  WN +LSG   +      + L   M  
Sbjct: 107  GSLVHAYLRFGRISEAYKVFDEMS----ERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
             G   +  +VS VL     L         H Y +++GLD +L+V  +L+D+Y K   L+ 
Sbjct: 163  EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
            AQ VF  M+ R++V WNS+ISG   +G    A KM   M    + PD+++  SL S  + 
Sbjct: 223  AQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282

Query: 646  WGQSKEA--------------------------------LVIIHHMKNSGIYPNVVTWTS 673
             G  + A                                +     M +S    + V+W +
Sbjct: 283  GGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNT 342

Query: 674  LISGSLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            LI+G +QN    E+++ +  MQ+ E +K    T  S+L     LG LQ G  +H L +K 
Sbjct: 343  LITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI 402

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G   D YV T LID+Y+K G L  A  +F K   ++   WN +I G  ++G+G EA+ LF
Sbjct: 403  GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLF 462

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
              + + G +PD +TF +LLAAC ++GLV++G  +FD M   Y+I+P  +HY+CM D+LG+
Sbjct: 463  SRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGR 522

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG LDEA++FI+ MP KPD+ +WGALLG+CRIHG++E  ++AS+ LF+L+P N   Y LM
Sbjct: 523  AGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLM 582

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA--EGAPHPATGEIYF 970
             N+ A   +W+ V+ +R  +    ++    WS I++ + V+VF +  +  PHP   EI  
Sbjct: 583  SNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQA 642

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            EL  L+++++ +GYV D   V QD++++EK  +L +H+E+LAI +G++ T SR P+ + K
Sbjct: 643  ELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYK 702

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH A KY+S +  REI +RD  RFHHF++G CSC D W
Sbjct: 703  NLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 158/625 (25%), Positives = 274/625 (43%), Gaps = 59/625 (9%)

Query: 165 NSITNSPTSLALPPTDTLAKQAQLSCI----SSGFCFLNETNKFRCLSSVKSKHAQMIKM 220
           N++  + +  ALP       +  LSC       GF F +        +S    HA  +++
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAAQLHACALRL 96

Query: 221 GKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLE 280
           G +  S     SL+  YL FG  + A K F     R    W++ L           E + 
Sbjct: 97  GLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGL-CRNARAAEAVG 155

Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
           ++G + G+GV   +  ++ +L +C  L    L + +H   +K G D ++ +  AL++ YG
Sbjct: 156 LFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYG 215

Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV 400
           K   +E A  +F  + +  D + WN II    +  +   A+K+F+ M+ S       T+V
Sbjct: 216 KLGMLEEAQCVFHGM-ECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLV 274

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            +  A A+ G     K +H YV++   +  ++   N ++ MY++ + +E A R+FDSM  
Sbjct: 275 SLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPV 334

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            +  SWN++I+ Y   G  + A   +  M                               
Sbjct: 335 QDSVSWNTLITGYMQNGLANEAVERYGHMQKH---------------------------- 366

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             G++++     G+ VS VL A + L  L+ G   H   ++ GL+ D+YVGT L+D+Y K
Sbjct: 367 -EGLKAI----QGTFVS-VLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAK 420

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
              L  A  +F+ M  R+   WN++ISG    G    A  + ++M++E IKPD V++ SL
Sbjct: 421 CGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSL 480

Query: 640 VSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           ++  S  G   +       M+ +  I P    +  +     +     E+  F   +Q   
Sbjct: 481 LAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNF---IQNMP 537

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA-----YVATGLIDMYSKSG- 752
           IKP+S    +LL  C   G ++ GK    +  +N F  D      YV   + +MY+K G 
Sbjct: 538 IKPDSAVWGALLGACRIHGNVEMGK----VASQNLFELDPENVGYYVL--MSNMYAKVGK 591

Query: 753 --NLKSAREVFRKSANKTLASWNCM 775
              +   R + R+   +    W+ +
Sbjct: 592 WDGVDEVRSLVRRQNLQKTPGWSSI 616



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 221/538 (41%), Gaps = 82/538 (15%)

Query: 315 EVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           ++HA  ++ G     V    +L++ Y +   +  A K+F E+S+  D   WN ++    R
Sbjct: 88  QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSE-RDVPAWNAMLSGLCR 146

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N +   A+ LF  M        + T+  +L  C  +G       +H Y +K  L+  L V
Sbjct: 147 NARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFV 206

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
           CN LI +Y +   LE A  VF  M+  +L +WNS+IS     G    A  +F  M  S +
Sbjct: 207 CNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGV 266

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            PD++T   L S     G  ++  +L                                  
Sbjct: 267 SPDVLTLVSLASAIAQGGDGRSAKSL---------------------------------- 292

Query: 554 SHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            H Y++R G D  D+  G +++DMY K   ++ AQ +FD+M  ++ V+WN+LI+GY   G
Sbjct: 293 -HCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNG 351

Query: 613 LFVNAKKMLNQMEEEE------------------------------------IKPDLVSW 636
           L   A +    M++ E                                    +  D+   
Sbjct: 352 LANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVG 411

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             L+  Y+  G+  EA+++   M      P    W ++ISG   + +  E+L  F +MQQ
Sbjct: 412 TCLIDLYAKCGKLAEAMLLFEKMPRRSTGP----WNAIISGLGVHGHGAEALTLFSRMQQ 467

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           E IKP+  T  SLL  C   GL+  G+     + +    +  A     + DM  ++G L 
Sbjct: 468 EGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLD 527

Query: 756 SAREVFRKSANKT-LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            A    +    K   A W  ++    I+GN +   +    L E    P+ + +  L++
Sbjct: 528 EAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFE--LDPENVGYYVLMS 583



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 141/340 (41%), Gaps = 20/340 (5%)

Query: 209 SVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           S KS H  +++ G  W+ DD++   +++  Y +  +  +A + F     +    W++ + 
Sbjct: 288 SAKSLHCYVMRRG--WDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLIT 345

Query: 267 DYESFGGEVQELLEVWGELHG-KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
            Y    G   E +E +G +   +G+         +L   + L A   G+ +HA  IK G 
Sbjct: 346 GYMQ-NGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGL 404

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           + DV++   L++ Y KC  +  A  LF ++        WN II     +     A+ LF 
Sbjct: 405 NVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTG-PWNAIISGLGVHGHGAEALTLFS 463

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN---CLISMYS 442
            MQ    K    T V +L AC+  G   +G+    + +       + +     C+  M  
Sbjct: 464 RMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSF--FDVMQVTYDIVPIAKHYACMADMLG 521

Query: 443 RNNKLELATRVFDSMKDHNLSS-WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           R  +L+ A     +M     S+ W +++ +    G V++        N   + P+ + + 
Sbjct: 522 RAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGK--VASQNLFELDPENVGYY 579

Query: 502 CLLSGHFTH----GSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            L+S  +           V +L+R  Q+L   P  SS+ V
Sbjct: 580 VLMSNMYAKVGKWDGVDEVRSLVR-RQNLQKTPGWSSIEV 618


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Brachypodium distachyon]
          Length = 874

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/843 (31%), Positives = 437/843 (51%), Gaps = 75/843 (8%)

Query: 267  DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            DY   G    E L+ + ++H  G + +   ++ +LK+C  +     G ++H   +K GFD
Sbjct: 73   DYGRRGKGRGEALDHFVDVHRCGRV-QGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFD 131

Query: 327  -FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
              +V +  AL++ Y KC  VE    +F  +    + + W  ++   ++     + + LF 
Sbjct: 132  RAEVGVGTALVDMYMKCGGVEDGRVVFEGMPK-RNVVTWTSLLTGYVQGRACSDVMALFF 190

Query: 386  EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
             M+         T   +L A A  GA   G+++H   +K    S + VCN LI+MYS+  
Sbjct: 191  RMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSK-- 248

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
                                          G V+ A ++F +M +     D+++WN L++
Sbjct: 249  -----------------------------CGLVEEAKAVFRQMETR----DMVSWNTLMA 275

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            G   +      L L    ++   + + S+ S V++    L+ L   R+ H  +L++G   
Sbjct: 276  GLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHS 335

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            D  V T++MD Y K   L +A  +F  M  ++N+V+W ++I G         A  + ++M
Sbjct: 336  DGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRM 395

Query: 625  EEEEIKPDLVSWNS-------------------------------LVSGYSIWGQSKEAL 653
             E+ +KP+  ++++                               L++ YS  G ++EAL
Sbjct: 396  REDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEAL 455

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             I   +     + +VV W++++S   Q  +   +   FI+M  + +KPN  T+SS +  C
Sbjct: 456  SIFKMID----HKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDAC 511

Query: 714  GG-LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
                  +  G++ H + +K  +     V + L+ MY++ G++ SAR VF +  ++ L SW
Sbjct: 512  ASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSW 571

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            N MI G+A +G  KEA+  F ++   G + D  TF A++  C ++GLV+EG +YFDSM  
Sbjct: 572  NSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVM 631

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
            D+NI PT+EHYSCMVDL  +AG LDE  + I  MPF   A +W  LLG+CR+H ++E  +
Sbjct: 632  DHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGK 691

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
            +A+++L  LEP +SA Y L+ N+ A + RW++ + +R  MD   VK     SWIQI   V
Sbjct: 692  LAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKV 751

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            H F A    HP + +IY +L  + + +K+ GY P+T  V  DI EE+K  +L+ H+E+LA
Sbjct: 752  HSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLA 811

Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
            + +GL+ T  R P++++KN RVC DCH   K +SL+  REI +RD +RFHHF  G CSC 
Sbjct: 812  LAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCG 871

Query: 1073 DCW 1075
            D W
Sbjct: 872  DFW 874



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 5/246 (2%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HAQ+IK     ++  +  +L+  Y + G+   A   F +   +    WS+ L  Y S  G
Sbjct: 423 HAQIIKT-NYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCY-SQAG 480

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHLK 332
           +      V+ ++  +G+      ++  +  C    A    G + HA  IK  +   + + 
Sbjct: 481 DCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVG 540

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  Y +   ++SA  +F   +D  D + WN +I    ++   + A+  FR+M+    
Sbjct: 541 SALVTMYARKGSIDSARIVFERQTD-RDLVSWNSMISGYAQHGYSKEALDTFRQMETVGI 599

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
           +    T + ++  C   G   EG+Q     V+   +   +   +C++ +YSR  KL+   
Sbjct: 600 EMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETM 659

Query: 452 RVFDSM 457
            + + M
Sbjct: 660 NLIEGM 665


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 278/920 (30%), Positives = 448/920 (48%), Gaps = 92/920 (10%)

Query: 197  FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
             L      R LS  +  HA+++ +G     +++   L+  YL+        + F     R
Sbjct: 35   LLRAAGDDRLLSQGRRIHARIVSLGL---EEELGNHLLRLYLKCESLGDVEEVFSRLEVR 91

Query: 257  SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
              A W++ +  Y   G + +  + ++  +  +GV   +     +LK C +L     G  +
Sbjct: 92   DEASWTTIITAYTEHG-QAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150

Query: 317  HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNE 375
            HA +++ G      L   L++ YG C  V SA  LF +   +E DL+ WN  I    ++ 
Sbjct: 151  HAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEK---MERDLVSWNAAIAANAQSG 207

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
                A++LF+ MQ    +    T+V  L  CA +    + + IH  V +S LE  L V  
Sbjct: 208  DLGIALELFQRMQLEGVRPARITLVIALTVCATI---RQAQAIHFIVRESGLEQTLVVST 264

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             L S Y+R   L  A  VFD   +                                    
Sbjct: 265  ALASAYARLGHLYQAKEVFDRAAER----------------------------------- 289

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D+++WN +L  +  HG       L   M   G  P  S V++V  A T    L++GR  H
Sbjct: 290  DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISP--SKVTLV-NASTGCSSLRFGRMIH 346

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            G  L  GLD D+ +G +L+DMY +    + A+ +F  +   N V+WN++I+G   KG   
Sbjct: 347  GCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMK 405

Query: 616  NAKKMLNQMEEEEIKPDLVSW--------------------------------------- 636
             A ++  +M+ E + P   ++                                       
Sbjct: 406  RAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG 465

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             ++V  Y+  G   EA            + +VV+W ++IS   Q+ + + +L FF +M  
Sbjct: 466  TAVVKMYASCGAIDEAAASFQRGAMEDRH-DVVSWNAIISSLSQHGHGKRALGFFRRMDL 524

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
              + PN  T  ++L  C G   L  G+ +H     +G   + +VAT L  MY + G+L+S
Sbjct: 525  HGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLES 584

Query: 757  AREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            ARE+F K A  + +  +N MI  ++  G   EA+ LF  + + G +PD  +F ++L+AC 
Sbjct: 585  AREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACS 644

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + GL +EGW+ F SM   Y I P+ +HY+C VD+LG+AG+L +A + IR M  KP   +W
Sbjct: 645  HGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVW 704

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
              LLG+CR +  ++   +A+  + +L+P + + Y ++ N+LA + +W++   +R  M+  
Sbjct: 705  KTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESR 764

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            G++     SWI+I   VH F A    HP + EIY EL  L +E++++GYVPDTR V + +
Sbjct: 765  GLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKV 824

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            DE EK ++L  H+E+LAI  G+M + S   +RV+KN RVC DCH A K++S +  +EI +
Sbjct: 825  DEAEKERLLCQHSERLAIALGVM-SSSTDTVRVMKNLRVCEDCHNATKFISKIVNKEIVV 883

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHF +G CSC D W
Sbjct: 884  RDTHRFHHFVDGSCSCGDYW 903



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 223/527 (42%), Gaps = 85/527 (16%)

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           +V++L+A        +G++IH  ++   LE  L   N L+ +Y +   L     VF  ++
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLE 89

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
             + +SW ++I++YT                                    HG  +  + 
Sbjct: 90  VRDEASWTTIITAYT-----------------------------------EHGQAKRAIG 114

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           +   MQ  G R +  +   VL+A   L  L  GR  H +I+ +GL     +   L+ +Y 
Sbjct: 115 MFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYG 174

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
              C+ +A  +F+ M+ R++V+WN+ I+     G    A ++  +M+ E ++P  ++   
Sbjct: 175 SCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARIT--- 230

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYP-------------------------------N 667
           LV   ++    ++A  I   ++ SG+                                 +
Sbjct: 231 LVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERD 290

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           VV+W +++    Q+ +  E+   F +M  E I P+  T   L+    G   L+ G+ IH 
Sbjct: 291 VVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT---LVNASTGCSSLRFGRMIHG 347

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
             L+ G  +D  +   L+DMY++ G+ + AR +F++     + SWN MI G +  G  K 
Sbjct: 348 CALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNAV-SWNTMIAGSSQKGQMKR 406

Query: 788 AILLFHELLETGFQPDAITFTALLAAC----KNSGLVEEGWKYFDSM-STDYNIIPTIEH 842
           A+ LF  +   G  P   T+  LL A     + +  + EG K    + S  Y   P I  
Sbjct: 407 AVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG- 465

Query: 843 YSCMVDLLGKAGYLDEAW-DFIR-TMPFKPDATIWGALLGSCRIHGH 887
            + +V +    G +DEA   F R  M  + D   W A++ S   HGH
Sbjct: 466 -TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH 511


>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/806 (33%), Positives = 431/806 (53%), Gaps = 56/806 (6%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGF--DFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            +L+ C    +  LG ++HA +   G   + +  ++  L++ Y KC  +  A K+F E+ +
Sbjct: 91   LLQSCIDQGSAELGRKLHARI---GLLEEMNPFVETKLVSMYAKCGSLGEARKVFGEMRE 147

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              +   W+ +I    R + W   ++ F  M           + K+LQAC   G    GK 
Sbjct: 148  -RNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKL 206

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            IH  V++  +  N+ V N ++++Y++  +L  A R F++M   +  SWNS+I+ Y   G 
Sbjct: 207  IHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGE 266

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL----------- 526
            ++ +  LF KM    I+P ++TWN L++ +   G   + + L++ M+S            
Sbjct: 267  LEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTS 326

Query: 527  ------------------------GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
                                    G  PNG +V+  + A   L+ LK G E H   ++ G
Sbjct: 327  MISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIG 386

Query: 563  LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
               DL VG SL+DMY K+  L++A+ VFD +  +++  WNS+I GYC  G    A  +  
Sbjct: 387  CVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFI 446

Query: 623  QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG-IYPNVVTWTSLISGSLQN 681
            +M E ++ P++V+WN+++SGY   G   +A+ + H M+  G I  +  +W SLI+G LQN
Sbjct: 447  KMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQN 506

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
             +  ++L  F QMQ   I+PNS TM S+L  C  L   +  KEIH   L+     +  VA
Sbjct: 507  GHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVA 566

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
              LID Y+KSGN+  A+ +F+  ++K + SWN +I G+ ++G    A+ LF ++ + G +
Sbjct: 567  NCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVK 626

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P   TF +++ A   SG+V++G + F SM  DY I+P +EH+S M+DLLG++G L EA +
Sbjct: 627  PSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIE 686

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            FI  M  +PD+ IW ALL + +IHG++  A  A   L +LEP N + +  ++ + A+S +
Sbjct: 687  FIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGK 746

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH-LVSEMK 980
            +EDV +LR S      K  L  SWI+   IVH F A+    P     YF+  H  +  + 
Sbjct: 747  FEDVSKLRKSEKRSETKQPLGCSWIEAKNIVHTFVADDRSRP-----YFDFLHSWIENVA 801

Query: 981  KLGYVPDT--RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP--IRVIKNTRVCS 1036
            +    PD   R   ++ ++EE G V   H+EKLA+ + L+   S AP  +R++KN R+C 
Sbjct: 802  RKVKAPDQHDRLFIEEEEKEEIGGV---HSEKLALAFALIDP-SCAPRSVRIVKNLRMCG 857

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFH 1062
            DCH  AK++S++   EI+L D    H
Sbjct: 858  DCHGTAKFLSMLYSCEIYLSDSKCLH 883



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/513 (28%), Positives = 258/513 (50%), Gaps = 39/513 (7%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +N +  +AI     +    +     T +++LQ+C   G+   G+++H  +     E N  
Sbjct: 62  KNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHARI-GLLEEMNPF 120

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V   L+SMY++   L  A +VF  M++ NL +W++MI +Y                  SR
Sbjct: 121 VETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAY------------------SR 162

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            Q     W  ++   F              M   G  P+   +  +LQA       + G+
Sbjct: 163 EQ----MWREVVQHFFF-------------MMEDGIVPDEFLLPKILQACGNCGDAETGK 205

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H  ++R G+++++ V  S++ +Y K   L  A+  F+NM  R+ V+WNS+I+GYC KG
Sbjct: 206 LIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKG 265

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
               + ++  +M+EE I+P LV+WN L++ YS  G+  +A+ ++  M++  I P+V TWT
Sbjct: 266 ELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWT 325

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           S+ISG  QN    ++L+ F +M    I+PN  T++S +  C  L  L+ G E+H + +K 
Sbjct: 326 SMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKI 385

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
           G ++D  V   LIDMYSKSG L+ AR VF     K + +WN MI G+   G   +A  LF
Sbjct: 386 GCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLF 445

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            ++ E+   P+ +T+ A+++    +G  ++    F  M  D  I      ++ ++    +
Sbjct: 446 IKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQ 505

Query: 853 AGYLDEAWDFIRTMP---FKPDATIWGALLGSC 882
            G+ ++A    R M     +P++    ++L +C
Sbjct: 506 NGHKNKALGIFRQMQSFCIRPNSVTMLSILPAC 538



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 128/305 (41%), Gaps = 71/305 (23%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +  +       Q L E++ E+   G+      +T  +  C  L A   G+E+H+  
Sbjct: 324 WTSMISGFAQNNRRSQAL-ELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVA 382

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV------------------------- 355
           +K G   D+ +  +L++ Y K  ++E A ++F  +                         
Sbjct: 383 VKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAY 442

Query: 356 --------SDLEDDLL-WNEIIMVKLRNEKWENAIKLF---------------------- 384
                   SD+  +++ WN +I   ++N   + A+ LF                      
Sbjct: 443 DLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAG 502

Query: 385 --------------REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
                         R+MQ    +  S T++ +L ACA + A  + K+IHG +L+  L S 
Sbjct: 503 YLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSE 562

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           LSV NCLI  Y+++  +  A  +F  +   ++ SWNS+I+ Y   G  D A  LF++M  
Sbjct: 563 LSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTK 622

Query: 491 SRIQP 495
             ++P
Sbjct: 623 MGVKP 627


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 263/783 (33%), Positives = 429/783 (54%), Gaps = 38/783 (4%)

Query: 205  RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS-RSYADWSS 263
            R L + +  HA+++K G  +  ++ V++ +  +    DF   A   F     R+   W++
Sbjct: 1188 RALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAA 1247

Query: 264  FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
             +   +   G  ++ L  + E+   GV   + +L  +LK C  L    LG  VH  ++K 
Sbjct: 1248 IV-GLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKM 1306

Query: 324  GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
            GF   V +  +L++ YGKC  +E A K+F  + + ++ + WN +I+  ++N   + AI +
Sbjct: 1307 GFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVE-KNVVTWNSMIVGYVQNGLNQEAIDV 1365

Query: 384  FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
            F +M+    +    T+   L A A + A  EGKQ H   + ++L+               
Sbjct: 1366 FYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLD--------------- 1410

Query: 444  NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
                           D+ L S  S+I+ Y+ +G ++ A  +F++M    ++ D++TWN L
Sbjct: 1411 --------------LDNILGS--SIINFYSKVGLIEDAELVFSRM----LEKDVVTWNLL 1450

Query: 504  LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
            +S +  H      L +   M+S   R +  ++S +L A      +K G+E H Y +R  L
Sbjct: 1451 ISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNL 1510

Query: 564  DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
            + D+ V  S++DMY K + + +A++VFD+   R++V WN+L++ Y   GL   A K+  Q
Sbjct: 1511 ESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQ 1570

Query: 624  MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            M+ + + P+++SWNS++ G+   GQ  EA  +   M++ G  PN++TWT+LISG  Q+  
Sbjct: 1571 MQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGF 1630

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              E++ FF +MQ+  I+P+  +++S+L  C  +  L  G+ IH    ++ F     VAT 
Sbjct: 1631 GYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS 1690

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            L+DMY+K G++  A++VF   ++K L  +N MI  +A++G   EA+ LF  L + G +PD
Sbjct: 1691 LVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPD 1750

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
            +ITFT++L+AC ++GLV EG   F  M + +N+ P +EHY C+V LL + G LDEA   I
Sbjct: 1751 SITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLI 1810

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
             TMPF+PDA I G+LL +CR H  +E  E  S+ LFKLEP NS NY  + N  A + RW 
Sbjct: 1811 LTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWV 1870

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            +V  +R  M   G++     SWIQ    ++VF A    HP T EIY  L  L+SEM+ +G
Sbjct: 1871 EVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMG 1930

Query: 984  YVP 986
            YVP
Sbjct: 1931 YVP 1933



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 243/522 (46%), Gaps = 69/522 (13%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESNLSVCN 435
            + ++ L  EM+F   +       ++LQ C    A H G+QIH  +LK+      N  V  
Sbjct: 1156 QESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVET 1215

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             L+  Y++ +  E+A R+F  ++  N+ SW +++     +G+ + A   F +M  + + P
Sbjct: 1216 KLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFP 1275

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D    N +L                         PN      VL+A   L+L+  G+  H
Sbjct: 1276 D----NFVL-------------------------PN------VLKACGSLQLIGLGKGVH 1300

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            GY+L+ G    ++V +SL+DMY K   L++A++VFD+M  +N+V WNS+I GY   GL  
Sbjct: 1301 GYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQ 1360

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMKNSGIY----- 665
             A  +   M  E I+P  V+  S +S  +     I G+   A+ I++ +    I      
Sbjct: 1361 EAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSII 1420

Query: 666  ---------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                  +VVTW  LIS  +Q+    ++L     M+ E+++ +S 
Sbjct: 1421 NFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSV 1480

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T+SS+L        ++ GKE HC C++     D  VA  +IDMY+K   +  AR+VF  +
Sbjct: 1481 TLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDST 1540

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              + L  WN ++  +A  G   EA+ LF+++      P+ I++ +++     +G V E  
Sbjct: 1541 TERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAK 1600

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
              F  M +     P +  ++ ++  L ++G+  EA  F + M
Sbjct: 1601 DMFSQMQS-LGFQPNLITWTTLISGLAQSGFGYEAILFFQKM 1641



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 165/648 (25%), Positives = 285/648 (43%), Gaps = 102/648 (15%)

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG--FDFDVH 330
            G +QE + +  E+  +       I   +L+ C    A   G ++HA ++K G  F  + +
Sbjct: 1153 GHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEY 1212

Query: 331  LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
            ++  L+ FY KC   E A +LF  +  + +   W  I+ ++ R    E+A+  F EMQ +
Sbjct: 1213 VETKLVVFYAKCDFPEVAVRLFHRLR-VRNVFSWAAIVGLQCRMGFSEDALLGFIEMQEN 1271

Query: 391  SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                 +  +  +L+AC  +     GK +HGYVLK    + + V + L+ MY +   LE A
Sbjct: 1272 GVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDA 1331

Query: 451  TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             +VFDSM + N+ +WNSMI     +GYV       N +N                     
Sbjct: 1332 RKVFDSMVEKNVVTWNSMI-----VGYVQ------NGLN--------------------- 1359

Query: 511  GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
               Q  + +   M+  G  P   +V+  L A   L  L  G++ H   + N LD D  +G
Sbjct: 1360 ---QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILG 1416

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            +S+++ Y K   +++A+ VF  M  +++V WN LIS Y        A  M + M  E ++
Sbjct: 1417 SSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLR 1476

Query: 631  PDLVSWNSLVSGYSI-----WGQSKEALVIIHHMKNSGIYPN------------------ 667
             D V+ +S++S  ++      G+      I  ++++  +  N                  
Sbjct: 1477 FDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKV 1536

Query: 668  --------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
                    +V W +L++   Q     E+LK F QMQ + + PN  + +S++     LG L
Sbjct: 1537 FDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI-----LGFL 1591

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
            +NG+           + +A       DM+S+  +L              L +W  +I G 
Sbjct: 1592 RNGQ-----------VNEAK------DMFSQMQSL---------GFQPNLITWTTLISGL 1625

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A  G G EAIL F ++ E G +P   + T++L AC +   +  G +      T +    +
Sbjct: 1626 AQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYG-RAIHGFITRHEFCLS 1684

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            +   + +VD+  K G +DEA      M  K +  I+ A++ +  +HG 
Sbjct: 1685 VPVATSLVDMYAKCGSIDEAKKVFHMMSSK-ELPIYNAMISAYALHGQ 1731


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
            [Vitis vinifera]
          Length = 799

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 273/814 (33%), Positives = 410/814 (50%), Gaps = 89/814 (10%)

Query: 308  MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD---------- 357
            M++ +   VHA +I  GF    ++   L++ Y K  D+ SA+ LF E+            
Sbjct: 29   MSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLI 88

Query: 358  ----------------------LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
                                  + D + +N +I     N     AI+LFR++  +  +  
Sbjct: 89   AAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPD 148

Query: 396  SRTIVKMLQACAK-VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR---------NN 445
            + T   +L A A  V    + +QIH  V+KS      SV N L+S++ +         ++
Sbjct: 149  NFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSS 208

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
             +  A ++FD M + +  SW +MI+ Y   G +D A    + M     +  ++ WN ++S
Sbjct: 209  LMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMT----EKLVVAWNAMIS 264

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN---- 561
            G+  HG +   L + R M  LG + +  + + VL A        +G++ H YILR     
Sbjct: 265  GYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRP 324

Query: 562  GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
             LD+ L V  +L  +Y K   +  A++VF+ M  +                         
Sbjct: 325  SLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK------------------------- 359

Query: 622  NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                      DLVSWN+++SGY   G+  EA      M       N++TWT +ISG  QN
Sbjct: 360  ----------DLVSWNAILSGYVNAGRIDEAKSFFEEMPER----NLLTWTVMISGLAQN 405

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                ESLK F +M+ E  +P     +  +  C  L  L +G+++H   ++ GF       
Sbjct: 406  GFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAG 465

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
              LI MY+K G +++A  +F         SWN MI     +G+G +A+ LF  +L+    
Sbjct: 466  NALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDIL 525

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            PD ITF  +L+ C ++GLVEEG +YF SMS  Y I P  +HY+ M+DLL +AG   EA D
Sbjct: 526  PDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKD 585

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
             I TMP +P   IW ALL  CRIHG+++    A+ RLF+L P +   Y L+ N+ A   R
Sbjct: 586  MIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGR 645

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            W+DV ++R  M + GVK     SWI+++  VHVF  +   HP    +Y  L  L  +M+K
Sbjct: 646  WDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRK 705

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
            LGY+PDT+ V  D++ E+K  VL +H+EKLA+ +GL+K    A +RV KN R+C DCH A
Sbjct: 706  LGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNA 765

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             K+MS V  REI +RDG RFHHF+ GECSC + W
Sbjct: 766  FKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/517 (20%), Positives = 238/517 (46%), Gaps = 34/517 (6%)

Query: 390 SSAKAISRTIVKMLQACAKVG--AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
           ++ + ++      LQ C      ++   + +H +++ S  +    + N LI +Y +++ L
Sbjct: 7   ANVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDL 66

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
             A  +FD ++  ++ +  ++I++++  G  ++A  +F    +     D + +N +++G+
Sbjct: 67  VSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIF--FATPLGIRDTVCYNAMITGY 124

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL-RLLKYGRESHGYILRNGLDYD 566
             +      + L R +   GFRP+  + + VL A+  +    K  ++ H  ++++G  + 
Sbjct: 125 SHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFV 184

Query: 567 LYVGTSLMDMYVK---------NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
             V  +L+ ++VK         +  +  A+++FD M  R+ ++W ++I+GY   G    A
Sbjct: 185 TSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAA 244

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
           ++ L+ M E+ +    V+WN+++SGY   G   EAL +   M   GI  +  T+TS++S 
Sbjct: 245 RQFLDGMTEKLV----VAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSA 300

Query: 678 SLQNENYRESLKFFIQMQQEDIKPN-------STTMSSLLQTCGGLGLLQNGKEIHCLCL 730
                 +    +    + + + +P+       +  +++L   CG    +   +++     
Sbjct: 301 CANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGK---VDEARQV----F 353

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
               +KD      ++  Y  +G +  A+  F +   + L +W  MI G A  G G+E++ 
Sbjct: 354 NQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLK 413

Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
           LF+ +   GF+P    F   + AC     +  G +   +         ++   + ++ + 
Sbjct: 414 LFNRMKSEGFEPCDYAFAGAIIACAWLAALMHG-RQLHAQLVRLGFDSSLSAGNALITMY 472

Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            K G ++ A     TMP+  D+  W A++ +   HGH
Sbjct: 473 AKCGVVEAAHCLFLTMPYL-DSVSWNAMIAALGQHGH 508



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 35/308 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y+  G+  +A +       +    W++ +  Y   G  + E LE++ +++  G+ 
Sbjct: 230 TMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFL-EALEMFRKMYLLGIQ 288

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKR----GFDFDVHLKCALMNFYGKCRDVES 347
           +     T +L  C     F  G +VHA +++       DF + +  AL   Y KC  V+ 
Sbjct: 289 WDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDE 348

Query: 348 ANKLFSE--VSDL---------------------------EDDLL-WNEIIMVKLRNEKW 377
           A ++F++  V DL                           E +LL W  +I    +N   
Sbjct: 349 ARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFG 408

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           E ++KLF  M+    +         + ACA + A   G+Q+H  +++   +S+LS  N L
Sbjct: 409 EESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNAL 468

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           I+MY++   +E A  +F +M   +  SWN+MI++    G+   A  LF  M    I PD 
Sbjct: 469 ITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDR 528

Query: 498 ITWNCLLS 505
           IT+  +LS
Sbjct: 529 ITFLTVLS 536



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 16/243 (6%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C  L A   G ++HA L++ GFD  +    AL+  Y KC  VE+A+ LF  +  L D + 
Sbjct: 437 CAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL-DSVS 495

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           WN +I    ++     A++LF  M          T + +L  C+  G   EG   H Y  
Sbjct: 496 WNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEG---HRYF- 551

Query: 424 KSALESNLSVCNC------LISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLG 476
             ++     +C        +I +  R  K   A  + ++M  +     W ++++     G
Sbjct: 552 -KSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHG 610

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR--PNGSS 534
            +D+      ++     Q D  T+  L + + T G + +V  + + M+  G +  P  S 
Sbjct: 611 NMDLGIQAAERLFELMPQHD-GTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSW 669

Query: 535 VSV 537
           + V
Sbjct: 670 IEV 672


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Glycine max]
          Length = 824

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 268/817 (32%), Positives = 431/817 (52%), Gaps = 84/817 (10%)

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              ++ + CT +    +  ++HA L+  G   DV L   L+  Y    D+  ++  F  + 
Sbjct: 54   FNLVFRSCTNIN---VAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEG 415
              ++   WN ++   +R  ++ +++    E+   S  +    T   +L+AC  +    +G
Sbjct: 111  R-KNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLA---DG 166

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            +++H +VLK   E ++ V   LI +YSR                                
Sbjct: 167  EKMHCWVLKMGFEHDVYVAASLIHLYSR-------------------------------F 195

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G V+VA  +F  M       D+ +WN ++SG   +G+    L +L  M++   + +  +V
Sbjct: 196  GAVEVAHKVFVDMPVR----DVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTV 251

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            S +L    +   +  G   H Y++++GL+ D++V  +L++MY K   LQ+AQ VFD M+ 
Sbjct: 252  SSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEV 311

Query: 596  RNIVAWNSLISGY----------------CFKGL------FVNAKKMLNQMEEEEI---- 629
            R++V+WNS+I+ Y                 F G+       V+   +  Q+ +  I    
Sbjct: 312  RDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAV 371

Query: 630  ----------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                      + D+V  N+LV+ Y+  G    A  +   + +     +V++W +LI+G  
Sbjct: 372  HGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR----DVISWNTLITGYA 427

Query: 680  QNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            QN    E++  +  M++   I PN  T  S+L     +G LQ G +IH   +KN    D 
Sbjct: 428  QNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDV 487

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            +VAT LIDMY K G L+ A  +F +   +T   WN +I    I+G+G++A+ LF ++   
Sbjct: 488  FVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRAD 547

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            G + D ITF +LL+AC +SGLV+E    FD+M  +Y I P ++HY CMVDL G+AGYL++
Sbjct: 548  GVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEK 607

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A++ +  MP + DA+IWG LL +CRIHG+ E    AS RL +++  N   Y L+ N+ A 
Sbjct: 608  AYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYAN 667

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
              +WE   ++R    + G++    WS + +  +V VF A    HP   EIY EL  L ++
Sbjct: 668  VGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAK 727

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            MK LGYVPD   V QD++E+EK ++L SH+E+LAIV+G++ T  ++PIR+ KN RVC DC
Sbjct: 728  MKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDC 787

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H A KY+S +  REI +RD  RFHHF++G CSC D W
Sbjct: 788  HNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 230/516 (44%), Gaps = 52/516 (10%)

Query: 206 CLSSVKSK--HAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
           CLS    +  H  ++KMG  +  D  V  SLI  Y  FG    A K F     R    W+
Sbjct: 160 CLSLADGEKMHCWVLKMG--FEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWN 217

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIK 322
           + +  +    G V E L V   +  + V   +  ++ +L +C +      GV VH  +IK
Sbjct: 218 AMISGFCQ-NGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK 276

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFS--EVSDLEDDLLWNEIIMVKLRNEKWENA 380
            G + DV +  AL+N Y K   ++ A ++F   EV DL   + WN II    +N+    A
Sbjct: 277 HGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDL---VSWNSIIAAYEQNDDPVTA 333

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLIS 439
           +  F+EM F   +    T+V +     ++     G+ +HG+V++   LE ++ + N L++
Sbjct: 334 LGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVN 393

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR-IQPDII 498
           MY++   ++ A  VF+ +   ++ SWN++I+ Y   G    A   +N M   R I P+  
Sbjct: 394 MYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQG 453

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
           TW  +L       +Y +V  L +GM+                              HG +
Sbjct: 454 TWVSILP------AYSHVGALQQGMK-----------------------------IHGRL 478

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
           ++N L  D++V T L+DMY K   L++A  +F  +     V WN++IS     G    A 
Sbjct: 479 IKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKAL 538

Query: 619 KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISG 677
           ++   M  + +K D +++ SL+S  S  G   EA      M K   I PN+  +  ++  
Sbjct: 539 QLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVD- 597

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                 Y E  K +  +    I+ +++   +LL  C
Sbjct: 598 LFGRAGYLE--KAYNLVSNMPIQADASIWGTLLAAC 631


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 808

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/757 (33%), Positives = 397/757 (52%), Gaps = 75/757 (9%)

Query: 350  KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            ++F  + +  +  +WN ++   +++   E A+ L++ M  ++    + T   ++QACA  
Sbjct: 96   QIFDRIEN-SNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVR 154

Query: 410  GAFHEGKQIHGYVLKSALESNLSVCNCLISMYS--------------------------- 442
                 GK+IH +VLK   +S++ V N LI+MY+                           
Sbjct: 155  LLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 214

Query: 443  ----RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
                +   +E A  +FD M   N+ + NSMI     +G V  AW LFN+M+    + D++
Sbjct: 215  AGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMD----EKDMV 270

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            +W+ L+SG+  +G Y+  L +   M + G R +   V  VL A   L ++K G+  HG +
Sbjct: 271  SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 330

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            +R G++  + +  +L+ MY  +  + +AQ++F+   N                       
Sbjct: 331  IRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNL---------------------- 368

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                         D +SWNS++SG    G  ++A  +   M       ++V+W+++ISG 
Sbjct: 369  -------------DQISWNSMISGCMKCGSVEKARALFDVMPEK----DIVSWSAVISGY 411

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
             Q++ + E+L  F +MQ   I+P+ T + S++  C  L  L  GK +H    KNG   + 
Sbjct: 412  AQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNV 471

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
             + T L+DMY K G +++A EVF     K ++SWN +I+G A+ G  + ++ +F E+   
Sbjct: 472  ILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNN 531

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            G  P+ ITF  +L AC++ GLV+EG  +F SM   + I P ++HY CMVDLLG+AG L+E
Sbjct: 532  GVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNE 591

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A   I +MP  PD   WGALLG+C+ HG  E  E   R+L +L+P +   + L+ N+ A 
Sbjct: 592  AEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFAS 651

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
               WEDV  +R  M + GV      S I+ + +VH F A    HP   ++   L  +   
Sbjct: 652  KGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKR 711

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            +K  GY PDT  V  DIDEEEK   L  H+EKLAI +GL+      PIR++KN R+C+DC
Sbjct: 712  LKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDC 771

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            HTAAK +S    REI +RD  RFH+F+EG CSC D W
Sbjct: 772  HTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 204/393 (51%), Gaps = 9/393 (2%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +++   GK   V  A KLF+E+ D +D + W+ +I    +N  +E A+ +F EM  +  +
Sbjct: 243 SMIVLLGKMGQVMEAWKLFNEM-DEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 301

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                +V +L ACA +     GK IHG V++  +ES +++ N LI MYS + ++  A ++
Sbjct: 302 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 361

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F+   + +  SWNSMIS     G V+ A +LF+ M     + DI++W+ ++SG+  H  +
Sbjct: 362 FNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMP----EKDIVSWSAVISGYAQHDCF 417

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              L L   MQ    RP+ + +  V+ A T L  L  G+  H YI +NGL  ++ +GT+L
Sbjct: 418 SETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTL 477

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           +DMY+K  C++NA EVF+ M+ + + +WN+LI G    GL   +  M ++M+   + P+ 
Sbjct: 478 LDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNE 537

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           +++  ++      G   E       M +  GI PNV  +  ++    +     E+ K   
Sbjct: 538 ITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIE 597

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            M    + P+  T  +LL  C   G  + G+ +
Sbjct: 598 SMP---MAPDVATWGALLGACKKHGDTEMGERV 627



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 239/500 (47%), Gaps = 57/500 (11%)

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           S LE++L  C+ L       +++ L   + D+     L  + S  S + GL Y   +  +
Sbjct: 42  SILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKF-STDSPFIGLDY---SLQI 97

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           F+++ +S    +   WN ++  +    S +  L L + M      P+  +  +V+QA   
Sbjct: 98  FDRIENS----NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA- 152

Query: 545 LRLLKYG-RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
           +RLL++G +E H ++L+ G D D+YV  +L++MY     +++A+++FD     + V+WNS
Sbjct: 153 VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNS 212

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           +++GY  KG    AK + +QM +  I    V+ NS++      GQ  EA  + + M    
Sbjct: 213 ILAGYVKKGDVEEAKLIFDQMPQRNI----VASNSMIVLLGKMGQVMEAWKLFNEMDEK- 267

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              ++V+W++LISG  QN  Y E+L  FI+M    ++ +   + S+L  C  L +++ GK
Sbjct: 268 ---DMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGK 324

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN----------------- 766
            IH L ++ G      +   LI MYS SG +  A+++F  S N                 
Sbjct: 325 MIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCG 384

Query: 767 --------------KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
                         K + SW+ +I G+A +    E + LFHE+     +PD     ++++
Sbjct: 385 SVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVIS 444

Query: 813 ACKNSGLVEEG-W--KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           AC +   +++G W   Y        N+I      + ++D+  K G ++ A +    M  K
Sbjct: 445 ACTHLAALDQGKWVHAYIRKNGLKVNVILG----TTLLDMYMKCGCVENALEVFNGMEEK 500

Query: 870 PDATIWGALLGSCRIHGHLE 889
             ++ W AL+    ++G +E
Sbjct: 501 GVSS-WNALIIGLAVNGLVE 519



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 139/306 (45%), Gaps = 33/306 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S+I    + G    A K F     +    WS+ +  YE   G  +E L ++ E++  G+ 
Sbjct: 243 SMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQ-NGMYEEALVMFIEMNANGMR 301

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG----------- 340
               ++  +L  C  L     G  +H  +I+ G +  V+L+ AL++ Y            
Sbjct: 302 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 361

Query: 341 --------------------KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
                               KC  VE A  LF +V   +D + W+ +I    +++ +   
Sbjct: 362 FNGSHNLDQISWNSMISGCMKCGSVEKARALF-DVMPEKDIVSWSAVISGYAQHDCFSET 420

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           + LF EMQ    +     +V ++ AC  + A  +GK +H Y+ K+ L+ N+ +   L+ M
Sbjct: 421 LALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDM 480

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y +   +E A  VF+ M++  +SSWN++I      G V+ +  +F++M ++ + P+ IT+
Sbjct: 481 YMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITF 540

Query: 501 NCLLSG 506
             +L  
Sbjct: 541 MGVLGA 546


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 289/911 (31%), Positives = 458/911 (50%), Gaps = 88/911 (9%)

Query: 170  SPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDM 229
            SP  LA   T   +   Q  C  +    L      + +  +K  H  + K G + N    
Sbjct: 11   SPMVLATTTTTKPSLLNQSKCTKATPSSLKNC---KTIDELKMFHRSLTKQG-LDNDVST 66

Query: 230  VKSLIFHYLEFG--DFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGE 284
            +  L+    E G  +  S AK  F   S SY     ++S +  Y S  G   E + ++  
Sbjct: 67   ITKLVARSCELGTRESLSFAKEVF-ENSESYGTCFMYNSLIRGYAS-SGLCNEAILLFLR 124

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            +   G+          L  C K  A   G+++H  ++K G+  D+ ++ +L++FY +C +
Sbjct: 125  MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL-FREMQFSSAKAISRTIVKML 403
            ++SA K+F E+S+  + + W  +I    R +  ++A+ L FR ++       S T+V ++
Sbjct: 185  LDSARKVFDEMSE-RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
             ACAK+     G++++ ++  S +E N  + + L+ MY + N +++A R+FD     NL 
Sbjct: 244  SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
              N+M S+Y   G    A  +FN M  S ++PD I+   +LS                  
Sbjct: 304  LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS---MLSA----------------- 343

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                           + + ++LR + +G+  HGY+LRNG +    +  +L+DMY+K    
Sbjct: 344  ---------------ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
              A  +FD M N+ +V WNS+++GY   G    A +    M E+ I    VSWN+++SG 
Sbjct: 389  DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISG- 443

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPN 702
                                          L+ GSL    + E+++ F  MQ QE +  +
Sbjct: 444  ------------------------------LVQGSL----FEEAIEVFCSMQSQEGVNAD 469

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              TM S+   CG LG L   K I+    KNG   D  + T L+DM+S+ G+ +SA  +F 
Sbjct: 470  GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
               N+ +++W   I   A+ GN + AI LF +++E G +PD + F   L AC + GLV++
Sbjct: 530  SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQ 589

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G + F SM   + + P   HY CMVDLLG+AG L+EA   I  MP +P+  IW +LL +C
Sbjct: 590  GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            R+ G++E A  A+ ++  L P  + +Y L+ N+ A + RW D+ ++R SM E G++    
Sbjct: 650  RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             S IQI    H F++    HP    I   L  +      LG+VPD   V  D+DE+EK  
Sbjct: 710  TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIF 769

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            +L  H+EKLA+ YGL+ +     IR++KN RVCSDCH+ AK+ S V  REI LRD  RFH
Sbjct: 770  MLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFH 829

Query: 1063 HFREGECSCND 1073
            + R+G+CSC D
Sbjct: 830  YIRQGKCSCGD 840


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330-like [Cucumis
            sativus]
          Length = 712

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/667 (35%), Positives = 374/667 (56%), Gaps = 67/667 (10%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            Y+ +  +  +  LFN ++     P  + W  ++  + +HG     L    GM + G  P+
Sbjct: 50   YSHINLLHDSLRLFNTIHF----PPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPD 105

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ------- 584
             +    VL++   L  L  G   HGYI+R GLD+DLY G +LM+MY K   L+       
Sbjct: 106  HNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRL 165

Query: 585  NAQEVFDNMKNR-------------------------NIVAWNSLISGYCFKGLFVNAKK 619
             A EVFD M  R                         ++V+WN++I+G    GL+    +
Sbjct: 166  GAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225

Query: 620  MLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQS-KEAL---------VIIHHM 659
            M+ +M    +KPD  + +S++           G  I G S ++ L         +I  + 
Sbjct: 226  MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYA 285

Query: 660  KNSGIYPNV-----------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            K + +  +            ++W S+I+G +QN  + E L+FF QM    IKP S + SS
Sbjct: 286  KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            ++  C  L  L  GK++H    +NGF ++ ++A+ L+DMY+K GN+++A+++F +   + 
Sbjct: 346  IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            + SW  MIMG A++G   +AI LF ++   G +P+ + F A+L AC + GLV+E WKYF+
Sbjct: 406  MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFN 465

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            SM+ D+ I P +EHY+ + DLLG+AG L+EA+DFI  M   P  +IW  LL +CR+H ++
Sbjct: 466  SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNI 525

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
            + AE  + R+ +++P N+  Y L+ N+ + + RW++  + R SM  +G++     SWI++
Sbjct: 526  DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 585

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
               V+ F A    HP   +I   +  LV  M+K GYVPDT  V+ D++EE+K  ++ SH+
Sbjct: 586  KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHS 645

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            E+LAIV+G++ T +   IRV KN RVC+DCHTA K++S + GREI +RD +RFHHF+ G 
Sbjct: 646  ERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 705

Query: 1069 CSCNDCW 1075
            CSC D W
Sbjct: 706  CSCGDYW 712



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 243/539 (45%), Gaps = 75/539 (13%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF-FLYFSRSYADWSSFLE 266
           S  +  HAQ++K       +  +   I+ ++       + + F  ++F  + A W S + 
Sbjct: 23  SQAQQLHAQVLKFQASSLCNLSLLLSIYSHINL--LHDSLRLFNTIHFPPALA-WKSVIR 79

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y S G   Q L    G L   G+     +   +LK C  LM   LG  +H  +I+ G D
Sbjct: 80  CYTSHGLPHQSLGSFIGML-ASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLD 138

Query: 327 FDVHLKCALMNFYGKCRDVE-------SANKLFSEVSDL--------------------- 358
           FD++   ALMN Y K R +E        A ++F E+++                      
Sbjct: 139 FDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEM 198

Query: 359 --EDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
             E DL+ WN II    RN  +E  +++ REM  ++ K  S T+  +L   A+      G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           K+IHG  ++  L++++ V + LI MY++  ++  + RVF  + +                
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTER--------------- 303

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                               D I+WN +++G   +G +   L   R M     +P   S 
Sbjct: 304 --------------------DGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSF 343

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           S ++ A   L  L  G++ HGYI RNG D ++++ +SL+DMY K   ++ A+++FD M+ 
Sbjct: 344 SSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRL 403

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
           R++V+W ++I G    G   +A ++  QME E IKP+ V++ ++++  S  G   EA   
Sbjct: 404 RDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKY 463

Query: 656 IHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            + M ++ GI P V  + ++     +     E+  F   M    I P  +  ++LL  C
Sbjct: 464 FNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH---IGPTGSIWATLLSAC 519


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Glycine max]
          Length = 876

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/835 (30%), Positives = 435/835 (52%), Gaps = 73/835 (8%)

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
            + QE L ++  L+  G+   S  ++ +L +C       +G +VH   +K G    + +  
Sbjct: 82   QTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGN 141

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM----VKLRNEKWENAIKLFREMQF 389
            +L++ Y K  +V    ++F E+ D  D + WN ++      +  ++ WE    LF  MQ 
Sbjct: 142  SLVDMYTKTGNVRDGRRVFDEMGD-RDVVSWNSLLTGYSWNRFNDQVWE----LFCLMQV 196

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               +    T+  ++ A A  GA   G QIH  V+K   E+   VCN LISM S++  L  
Sbjct: 197  EGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRD 256

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A  VFD+M++                                    D ++WN +++GH  
Sbjct: 257  ARVVFDNMEN-----------------------------------KDSVSWNSMIAGHVI 281

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
            +G           MQ  G +P  ++ + V+++   L+ L   R  H   L++GL  +  V
Sbjct: 282  NGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNV 341

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
             T+LM    K   + +A  +F  M   +++V+W ++ISGY   G    A  + + M  E 
Sbjct: 342  LTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREG 401

Query: 629  IKPDLVSWNSLVS-GYSIWGQSKEALVI-IHHMKNSGI---------------------- 664
            +KP+  +++++++  ++++     A VI  ++ K+S +                      
Sbjct: 402  VKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFE 461

Query: 665  ---YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG-LGLLQ 720
                 +V+ W+++++G  Q     E+ K F Q+ +E IKPN  T  S++  C      ++
Sbjct: 462  LIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVE 521

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             GK+ H   +K        V++ L+ +Y+K GN++SA E+F++   + L SWN MI G+A
Sbjct: 522  QGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYA 581

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
             +G  K+A+ +F E+ +   + DAITF  +++AC ++GLV +G  YF+ M  D++I PT+
Sbjct: 582  QHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTM 641

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            EHYSCM+DL  +AG L +A D I  MPF P AT+W  +L + R+H ++E  ++A+ ++  
Sbjct: 642  EHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIIS 701

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            LEP +SA Y L+ N+ A +  W +   +R  MD+  VK    +SWI++    + F A   
Sbjct: 702  LEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDL 761

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP +  IY +L  L + ++ +GY PDT  V+ DI++E+K  +L  H+E+LAI +GL+ T
Sbjct: 762  SHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIAT 821

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                P++++KN RVC DCH+  K +SLV  R I +RD  RFHHF+ G CSC D W
Sbjct: 822  LPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  150 bits (378), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 131/584 (22%), Positives = 265/584 (45%), Gaps = 80/584 (13%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE--SF 271
           H Q +K G + +   +  SL+  Y + G+     + F     R    W+S L  Y    F
Sbjct: 125 HCQCVKCGLVHHLS-VGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRF 183

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
             +V EL  +  ++ G    + + + T+I  L  +  A  +G+++HA ++K GF+ +  +
Sbjct: 184 NDQVWELFCLM-QVEGYRPDYYT-VSTVIAALANQ-GAVAIGMQIHALVVKLGFETERLV 240

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             +L++   K   +  A  +F  + + +D + WN +I   + N +   A + F  MQ + 
Sbjct: 241 CNSLISMLSKSGMLRDARVVFDNMEN-KDSVSWNSMIAGHVINGQDLEAFETFNNMQLAG 299

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
           AK    T   ++++CA +      + +H   LKS L +N +V   L+   ++  +++ A 
Sbjct: 300 AKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAF 359

Query: 452 RVFDSMKD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            +F  M    ++ SW +MIS Y   G  D A +LF+ M    ++P+          HFT 
Sbjct: 360 SLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPN----------HFT- 408

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
             Y  +LT+   +                          +  E H  +++   +    VG
Sbjct: 409 --YSTILTVQHAV--------------------------FISEIHAEVIKTNYEKSSSVG 440

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T+L+D +VK   + +A +VF+ ++ ++++AW+++++GY   G    A K+ +Q+  E IK
Sbjct: 441 TALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIK 500

Query: 631 PDLVSWNSLVS----------------GYSIWGQSKEALVI----------------IHH 658
           P+  ++ S+++                 Y+I  +   AL +                 H 
Sbjct: 501 PNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHE 560

Query: 659 MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
           +       ++V+W S+ISG  Q+   +++L+ F +MQ+ +++ ++ T   ++  C   GL
Sbjct: 561 IFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGL 620

Query: 719 LQNGKEIHCLCLKNGFIKDAYVA-TGLIDMYSKSGNLKSAREVF 761
           +  G+    + + +  I       + +ID+YS++G L  A ++ 
Sbjct: 621 VGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDII 664



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 41/271 (15%)

Query: 619 KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
           +   Q+ ++    DL   N L+  YS   Q++EAL +   +  SG               
Sbjct: 53  RFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSG--------------- 97

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
                               + P+S TMS +L  C G      G+++HC C+K G +   
Sbjct: 98  --------------------LSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHL 137

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            V   L+DMY+K+GN++  R VF +  ++ + SWN ++ G++      +   LF  +   
Sbjct: 138 SVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVE 197

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC--MVDLLGKAGYL 856
           G++PD  T + ++AA  N G V  G +     +    +    E   C  ++ +L K+G L
Sbjct: 198 GYRPDYYTVSTVIAALANQGAVAIGMQIH---ALVVKLGFETERLVCNSLISMLSKSGML 254

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            +A      M  K D+  W +++    I+G 
Sbjct: 255 RDARVVFDNMENK-DSVSWNSMIAGHVINGQ 284


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/645 (36%), Positives = 368/645 (57%), Gaps = 39/645 (6%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
             +++ +Y   G V  A+  F++M       D+  WN +LSG   +      + L   M  
Sbjct: 108  GALVHAYLRFGRVRDAYRAFDEMRHR----DVPAWNAMLSGLCRNARAAEAVGLFGRMVM 163

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
             G   +  +VS VL     L         H Y +++GLD +L+V  +++D+Y K   L+ 
Sbjct: 164  EGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEE 223

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
             ++VFD M +R++V WNS+ISG+   G   +A +M   M +  + PD+++  SL S  + 
Sbjct: 224  VRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQ 283

Query: 646  WGQ----------------------SKEALVIIH----------HMKNSGIYPNVVTWTS 673
             G                       +  A+V ++           M +S    + V+W +
Sbjct: 284  CGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNT 343

Query: 674  LISGSLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            LI+G +QN    E++  +  MQ+ E +KP   T  S+L     LG LQ G  +H L +K 
Sbjct: 344  LITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKT 403

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G   D YV T +ID+Y+K G L  A  +F ++  ++   WN +I G  ++G+G +A+ LF
Sbjct: 404  GLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLF 463

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             ++ + G  PD +TF +LLAAC ++GLV++G  +F+ M T Y I P  +HY+CMVD+ G+
Sbjct: 464  SQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGR 523

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG LD+A+DFIR MP KPD+ IWGALLG+CRIHG++E  ++AS+ LF+L+P N   Y LM
Sbjct: 524  AGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLM 583

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA--EGAPHPATGEIYF 970
             N+ A   +W+ V+ +R  +    ++    WS I++ + V+VF +  +   HP   EI  
Sbjct: 584  SNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQR 643

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            EL  L+++++ LGYVPD   V QD++E+EK ++L +H+E+LAI +G++ T  R P+ + K
Sbjct: 644  ELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYK 703

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH A KY+S +  REI +RD  RFHHF++G CSC D W
Sbjct: 704  NLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/572 (24%), Positives = 252/572 (44%), Gaps = 55/572 (9%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA  +++G +        +L+  YL FG    A +AF     R    W++ L        
Sbjct: 91  HACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGL-CRNA 149

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              E + ++G +  +GV   +  ++ +L +C  L    L + +H   +K G D ++ +  
Sbjct: 150 RAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCN 209

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A+++ YGK   +E   K+F  +S   D + WN II    +  +  +A+++F  M+ S   
Sbjct: 210 AMIDVYGKLGMLEEVRKVFDGMSS-RDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVS 268

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSRNNKLELATR 452
               T++ +  A A+ G    G+ +H Y+++   +  ++   N ++ MY++ +K+E A R
Sbjct: 269 PDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +FDSM   +  SWN++I+ Y   G    A  +++ M                        
Sbjct: 329 MFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHE-------------------- 368

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                         G +P   +   VL A + L  L+ G   H   ++ GL+ D+YVGT 
Sbjct: 369 --------------GLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTC 414

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           ++D+Y K   L  A  +F+    R+   WN++ISG    G    A  + +QM++E I PD
Sbjct: 415 VIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPD 474

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFF 691
            V++ SL++  S  G   +     + M+ + GI P    +  ++    +     ++  F 
Sbjct: 475 HVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFI 534

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA-----YVATGLID 746
             M    IKP+S    +LL  C   G ++ GK    +  +N F  D      YV   + +
Sbjct: 535 RNMP---IKPDSAIWGALLGACRIHGNVEMGK----VASQNLFELDPKNVGYYVL--MSN 585

Query: 747 MYSKSG---NLKSAREVFRKSANKTLASWNCM 775
           MY+K G    +   R + R+   +    W+ +
Sbjct: 586 MYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/339 (21%), Positives = 140/339 (41%), Gaps = 22/339 (6%)

Query: 211 KSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           +S H  M++ G  W+  D++   +++  Y +     +A + F     R    W++ +  Y
Sbjct: 291 RSVHCYMVRRG--WDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGY 348

Query: 269 ESFGGEVQELLEVWGELHG-KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
               G   E + V+  +   +G+         +L   + L A   G  +HA  IK G + 
Sbjct: 349 MQ-NGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL 407

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           DV++   +++ Y KC  ++ A  LF E +       WN +I     +     A+ LF +M
Sbjct: 408 DVYVGTCVIDLYAKCGKLDEAMLLF-EQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQM 466

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNK 446
           Q         T V +L AC+  G   +G+     +  +  ++       C++ M+ R  +
Sbjct: 467 QQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQ 526

Query: 447 LELATRVFDSMKDHNLSS----WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           L+ A   FD +++  +      W +++ +    G V++        N   + P  + +  
Sbjct: 527 LDDA---FDFIRNMPIKPDSAIWGALLGACRIHGNVEMGK--VASQNLFELDPKNVGYYV 581

Query: 503 LLSGHFTH----GSYQNVLTLLRGMQSLGFRPNGSSVSV 537
           L+S  +           V +L+R  Q+L   P  SS+ V
Sbjct: 582 LMSNMYAKVGKWDGVDEVRSLVR-RQNLQKTPGWSSIEV 619


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/768 (32%), Positives = 394/768 (51%), Gaps = 74/768 (9%)

Query: 344  DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            +++ A  +F ++      +LWN +I     +  ++ +I L+  M        + T   +L
Sbjct: 56   EIQLARHVFDQIPK-PSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLL 114

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            +AC+ + A   G+ IH +     L  +L V   L+ MY++   L  A  +F+S+   +  
Sbjct: 115  KACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD-- 172

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                                            DI+ WN +++    H  +   +  +  M
Sbjct: 173  -------------------------------RDIVAWNAMIAAFSFHALHAQTIHSVAQM 201

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            Q  G  PN S++  +L  + +   L  G+  H Y +RN    ++ + T+L+DMY K   L
Sbjct: 202  QQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLL 261

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGY-----------------CFKGL------------- 613
              A+++F+ +  +N V W+++I GY                 C  GL             
Sbjct: 262  FYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRA 321

Query: 614  ------FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                      KK+   M +  +  D    NSL+S Y+  G    A+  +  M    I  +
Sbjct: 322  CAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM----IAKD 377

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
             V+++++ISG +QN    ++L  F QMQ   I P   TM +LL  C  L  LQ+G   H 
Sbjct: 378  TVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHG 437

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              +  GF  D  +   +IDMYSK G +  +RE+F +  N+ + SWN MI+G+ I+G   E
Sbjct: 438  YTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVE 497

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF EL   G +PD +T  A+L+AC +SGLV EG  +F SMS ++NI P + HY CMV
Sbjct: 498  ALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMV 557

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLL +AG LDEA+ FI+ MPF P+  IWGALL +CR H ++E  E  S+++  L P  + 
Sbjct: 558  DLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTG 617

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            N+ LM N+ +   RW+D   +R      G K     SW++I  ++HVF      HP +  
Sbjct: 618  NFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSAS 677

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I  +L  L+ +MKKLGY  D+  V  D++EEEK ++LL H+EK+AI +G++ T   + I 
Sbjct: 678  INKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRIL 737

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V KN R+C DCH+A K+++L+  REI +RD +RFHHF++G C+C D W
Sbjct: 738  VTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 146/639 (22%), Positives = 265/639 (41%), Gaps = 110/639 (17%)

Query: 222 KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEV 281
           ++ +SD     L  +++   +   A   F      S   W+  +  Y ++ G  Q+ + +
Sbjct: 36  RVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTY-AWSGPFQQSIYL 94

Query: 282 WGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
           +  +   GV   +     +LK C+ L A  LG  +H      G   D+++  AL++ Y K
Sbjct: 95  YLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAK 154

Query: 342 CRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV 400
           C  +  A  LF+ +S  + D++ WN +I     +      I    +MQ +     S T+V
Sbjct: 155 CGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLV 214

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +L    +  A H+GK IH Y +++    N+ +   L+ MY++ + L  A ++F+++   
Sbjct: 215 SILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKK 274

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           N                 DV WS                   ++ G+  H S  + L L 
Sbjct: 275 N-----------------DVCWS------------------AMIGGYVLHDSISDALALY 299

Query: 521 RGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             M  + G  P  ++++ +L+A  +L  LK G++ H +++++G+D D  VG SL+ MY K
Sbjct: 300 DDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAK 359

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP-------- 631
              + NA    D M  ++ V+++++ISG    G    A  +  QM+   I P        
Sbjct: 360 CGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIAL 419

Query: 632 ---------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
                                      D    N+++  YS  G+   +  I   M+N   
Sbjct: 420 LPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNR-- 477

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
             ++++W ++I G   +    E+L  F ++Q   +KP+  T+ ++L  C   GL+  GK 
Sbjct: 478 --DIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGK- 534

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
                         Y  + +    S++ N+K             +A + CM+   A  GN
Sbjct: 535 --------------YWFSSM----SQNFNIK-----------PRMAHYICMVDLLARAGN 565

Query: 785 GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
             EA      +    F P+   + ALLAAC+    +E G
Sbjct: 566 LDEAYTFIQRM---PFVPNVRIWGALLAACRTHKNIEMG 601



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 116/264 (43%), Gaps = 7/264 (2%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H  MIK G   + D  V  SLI  Y + G   +A        ++    +S+ +    
Sbjct: 332 KKLHCHMIKSG--MDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCV 389

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G  ++ L ++ ++   G+      +  +L  C+ L A   G   H   + RGF  D 
Sbjct: 390 Q-NGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDT 448

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  A+++ Y KC  +  + ++F  + +  D + WN +I+    +     A+ LF+E+Q 
Sbjct: 449 SICNAIIDMYSKCGKITISREIFDRMQN-RDIISWNTMIIGYGIHGLCVEALSLFQELQA 507

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLE 448
              K    T++ +L AC+  G   EGK     + ++  ++  ++   C++ + +R   L+
Sbjct: 508 LGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLD 567

Query: 449 LATRVFDSMK-DHNLSSWNSMISS 471
            A      M    N+  W +++++
Sbjct: 568 EAYTFIQRMPFVPNVRIWGALLAA 591



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 12/152 (7%)

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
           AT L   +     ++ AR VF +    ++  WN MI  +A  G  +++I L+  +L+ G 
Sbjct: 44  ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103

Query: 801 QPDAITFTALLAACKNSGLVEEG-----WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
            P   TF  LL AC +   ++ G       +   +S D  +   + H      +  K G+
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLH------MYAKCGH 157

Query: 856 LDEAWDFIRTMPFKP-DATIWGALLGSCRIHG 886
           L +A     ++  +  D   W A++ +   H 
Sbjct: 158 LYQAQTLFNSISHQDRDIVAWNAMIAAFSFHA 189


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/738 (33%), Positives = 404/738 (54%), Gaps = 68/738 (9%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L+ C +   F + K +H +++K+       + N LIS Y++   +  A +VFD M   N
Sbjct: 15   LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG-SYQNVLTLL 520
            L SWN+++S+Y+ LG V     LF+ M     + D ++WN L+SG+   G  YQ+V    
Sbjct: 75   LYSWNTILSAYSKLGRVSEMEYLFDAMP----RRDGVSWNSLISGYAGCGLIYQSVKAYN 130

Query: 521  RGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              +++ G F  N  + S +L   ++   +K GR+ HG++++ G    ++VG+ L+DMY K
Sbjct: 131  LMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSK 190

Query: 580  NDCLQNAQEVFDNMKNRNIV-------------------------------AWNSLISGY 608
               +  A++VFD +  +N+V                               +W S+I+G+
Sbjct: 191  MGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGF 250

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------VSGYSIWGQSKEAL 653
               GL  +A  +  +M+ E ++ D  ++ S+               V  Y I    K+ +
Sbjct: 251  TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNI 310

Query: 654  VIIHHM-------KN----SGIYP-----NVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
             +   +       KN      ++      NVV+WT+++ G  QN    E++K F  MQ+ 
Sbjct: 311  FVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKY 370

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             I+P+  T+ S++ +C  L  L+ G + H   L +G I    V+  L+ +Y K G+++ +
Sbjct: 371  GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDS 430

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
              +F + + K   +W  ++ G+A +G   E I LF  +L  G +PD +TF  +L+AC  +
Sbjct: 431  HRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRA 490

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLVE+G + F+SM  ++ I+P  +HY+CM+DL  +AG ++EA +FI  MPF PDA  W  
Sbjct: 491  GLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWAT 550

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LL SCR +G+++  + A+  L +L+P N+A+Y L+ ++ A   +WE+V RLR  M + G+
Sbjct: 551  LLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGL 610

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            +     SWI+    VHVFSA+   +P + +IY EL  L  +M K GYVPD   V  D+ +
Sbjct: 611  RKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGD 670

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
             EK K+L  H+EKLAI +GL+      PIRV+KN RVCSDCH A KY+S +  REI +RD
Sbjct: 671  SEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRD 730

Query: 1058 GARFHHFREGECSCNDCW 1075
             ARFH F++G CSC D W
Sbjct: 731  TARFHLFKDGTCSCGDFW 748



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 256/566 (45%), Gaps = 76/566 (13%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE----- 354
           +LKLC +   F     +H+ +IK     +  L   L++ Y K   +  A K+F +     
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 355 ----------------VSDLE---------DDLLWNEIIMVKLRNEKWENAIKLFREM-Q 388
                           VS++E         D + WN +I           ++K +  M +
Sbjct: 75  LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134

Query: 389 FSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
              +  ++R T   +L   +K G    G+QIHG+V+K    S + V + L+ MYS+   +
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
             A +VFD + + N+  +N++I      G V+ +  LF +M     + D I+W  +++G 
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMR----ERDSISWTSMITGF 250

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
             +G  ++ + + R M+    + +  +   VL A   +  L+ G++ H YI+R     ++
Sbjct: 251 TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNI 310

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           +V ++L+DMY K   +++A+ VF  M  +N+V+W +++ GY   G    A K  + M++ 
Sbjct: 311 FVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKY 370

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKE---------------------ALVII---------- 656
            I+PD  +  S++S  +     +E                     ALV +          
Sbjct: 371 GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDS 430

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
           H + N   + + VTWT+L+SG  Q     E++  F  M    +KP+  T   +L  C   
Sbjct: 431 HRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRA 490

Query: 717 GLLQNGKEI-HCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-SW 772
           GL++ G +I   +  ++G   I+D Y  T +ID++S++G ++ AR    K      A SW
Sbjct: 491 GLVEKGNQIFESMINEHGIVPIQDHY--TCMIDLFSRAGRIEEARNFINKMPFSPDAISW 548

Query: 773 NCMIMGFAIYGN---GKEAILLFHEL 795
             ++     YGN   GK A     EL
Sbjct: 549 ATLLSSCRFYGNMDIGKWAAEFLMEL 574



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 241/588 (40%), Gaps = 107/588 (18%)

Query: 200 ETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYA 259
           ET+ F   +  K+ H+ +IK    +    ++ +LI  Y + G    A K F      +  
Sbjct: 21  ETHNF---TKAKNLHSHIIKTLP-YPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLY 76

Query: 260 DWSSFLEDYESFG--GEVQELLEV--------WGEL----HGKGVIFRS----------- 294
            W++ L  Y   G   E++ L +         W  L     G G+I++S           
Sbjct: 77  SWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKND 136

Query: 295 ------RI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK------ 341
                 RI  + +L L +K     LG ++H  ++K GF   V +   L++ Y K      
Sbjct: 137 GSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISC 196

Query: 342 -------------------------CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
                                    C  VE + +LF E+ +  D + W  +I    +N  
Sbjct: 197 ARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRE-RDSISWTSMITGFTQNGL 255

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
             +AI +FREM+  + +    T   +L AC  V A  EGKQ+H Y++++  + N+ V + 
Sbjct: 256 DRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASA 315

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           L+ MY +   ++ A  VF  M   N+ SW +M+  Y   GY + A   F+ M    I+PD
Sbjct: 316 LVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPD 375

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
                      FT GS                         V+ +   L  L+ G + H 
Sbjct: 376 ----------DFTLGS-------------------------VISSCANLASLEEGAQFHA 400

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
             L +GL   + V  +L+ +Y K   ++++  +F+ +  ++ V W +L+SGY   G    
Sbjct: 401 RALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANE 460

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLI 675
              +   M    +KPD V++  ++S  S  G  ++   I   M N  GI P    +T +I
Sbjct: 461 TIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMI 520

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               +     E+  F  +M      P++ + ++LL +C   G +  GK
Sbjct: 521 DLFSRAGRIEEARNFINKMP---FSPDAISWATLLSSCRFYGNMDIGK 565



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 139/311 (44%), Gaps = 21/311 (6%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  +L+  Y +  +  SA   F     ++   W++ L  Y    G  +E ++ + ++   
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQ-NGYSEEAVKTFSDMQKY 370

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G+      L  ++  C  L +   G + HA  +  G    + +  AL+  YGKC  +E +
Sbjct: 371 GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDS 430

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
           ++LF+E+S  +D++ W  ++    +  K    I LF  M     K    T + +L AC++
Sbjct: 431 HRLFNEIS-FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR 489

Query: 409 VGAFHEGKQI-------HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DH 460
            G   +G QI       HG V    ++ + +   C+I ++SR  ++E A    + M    
Sbjct: 490 AGLVEKGNQIFESMINEHGIV---PIQDHYT---CMIDLFSRAGRIEEARNFINKMPFSP 543

Query: 461 NLSSWNSMISSYTGLGYVDVA-WSLFNKMNSSRIQP-DIITWNCLLSGHFTHGSYQNVLT 518
           +  SW +++SS    G +D+  W+    M    + P +  ++  L S +   G ++ V  
Sbjct: 544 DAISWATLLSSCRFYGNMDIGKWAAEFLM---ELDPHNTASYVLLSSVYAAKGKWEEVAR 600

Query: 519 LLRGMQSLGFR 529
           L + M+  G R
Sbjct: 601 LRKDMRDKGLR 611



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 4/123 (3%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           +LL+ C         K +H   +K     + ++   LI  Y+K G++  A +VF +  + 
Sbjct: 14  ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
            L SWN ++  ++  G   E   LF  +     + D +++ +L++     GL+ +  K +
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMP----RRDGVSWNSLISGYAGCGLIYQSVKAY 129

Query: 828 DSM 830
           + M
Sbjct: 130 NLM 132


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Cucumis sativus]
          Length = 816

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/810 (32%), Positives = 421/810 (51%), Gaps = 76/810 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            I   CTK+    L  ++HA L+  G    + L   L+N Y    D+  A   F ++   +
Sbjct: 49   IFLYCTKVH---LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQT-K 104

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFRE-MQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            D   WN +I    R   +  A+  F E +  S  ++   T   +++AC   G   +G+++
Sbjct: 105  DVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKV 161

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            H  VLK   E ++ +    I  YSR                                G+V
Sbjct: 162  HCLVLKLGFECDVYIAASFIHFYSR-------------------------------FGFV 190

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
             +A +LF+ M    +  DI TWN ++SG + +G     L +   M+      +  ++S +
Sbjct: 191  SLACNLFDNM----MIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSL 246

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
            L    +L  +  G   H Y ++ GL++DL+V  +L++MY K   L++A+ +F+ MK R+I
Sbjct: 247  LPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDI 306

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL----------VSGYSIWGQ 648
            V+WNSL++ +      V A  + N+M    + PDL++  SL          +S  SI G 
Sbjct: 307  VSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGF 366

Query: 649  SKEALVIIHHMK--NSGI--------------------YPNVVTWTSLISGSLQNENYRE 686
                   +H +   N+ I                      +V++W SLI+G  QN    E
Sbjct: 367  VTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANE 426

Query: 687  SLKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            ++  +  M+      PN  T  S+L     LG L+ G + H   +KN    D +V+T L+
Sbjct: 427  AIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLV 486

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            DMY K G L  A  +F +  +++  SWN +I    ++G G +A+ LF E+   G +PD I
Sbjct: 487  DMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHI 546

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF +LL+AC +SGLV+EG   F  M   Y I P+++HY CMVDL G+AG+L++A++F++ 
Sbjct: 547  TFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKN 606

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP +PD ++WGALLG+CRIH ++E     S  L K+E  N   Y L+ N+ A    WE V
Sbjct: 607  MPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGV 666

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
            + +R    + G+K    WS I++D+ + VF      HP   EIY EL +L ++MK +GYV
Sbjct: 667  DEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYV 726

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            PD   V QD++++EK  +L SH+E+LA+ +G++ T  +  +++ KN RVC DCH A K++
Sbjct: 727  PDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFI 786

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S +  REI +RD  RFHHF++G CSC D W
Sbjct: 787  SKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 147/610 (24%), Positives = 267/610 (43%), Gaps = 77/610 (12%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  HA ++  GK   S  +   LI  Y   GD   A   F    ++    W+S +  Y  
Sbjct: 60  KQLHALLVVSGKT-QSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118

Query: 271 FGGEVQELLEVWGELHGKGVIFRSR-ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
            G      ++ + E      +         +++ C  L     G +VH  ++K GF+ DV
Sbjct: 119 IG-HFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDV 174

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           ++  + ++FY +   V  A  LF  +  + D   WN +I     N K   A+++F EM+F
Sbjct: 175 YIAASFIHFYSRFGFVSLACNLFDNMM-IRDIGTWNAMISGFYLNGKVAEALEVFDEMRF 233

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            S    S TI  +L  C ++     G  IH Y +K  LE +L VCN LI+MY++  +L  
Sbjct: 234 KSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRS 293

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  +F+ MK  ++ SWNS+++++       +A  ++NKM+S  + PD++T   L S    
Sbjct: 294 AETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLAS---- 349

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLY 568
                                             EL      R  HG++ R     +D+ 
Sbjct: 350 -------------------------------VAAELGNFLSSRSIHGFVTRRCWFLHDIA 378

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME-EE 627
           +G +++DMY K   + +A++VF+ +  +++++WNSLI+GY   GL   A  + + M    
Sbjct: 379 LGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYS 438

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV------------------- 668
              P+  +W S+++ +S  G  K+ +     +  + +Y ++                   
Sbjct: 439 GAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADA 498

Query: 669 ------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
                       V+W ++IS    +    +++K F +MQ E +KP+  T  SLL  C   
Sbjct: 499 LSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHS 558

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSAREVFRK-SANKTLASWNC 774
           GL+  G+    L  +   I+ +    G ++D++ ++G+L+ A    +       ++ W  
Sbjct: 559 GLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGA 618

Query: 775 MIMGFAIYGN 784
           ++    I+ N
Sbjct: 619 LLGACRIHEN 628


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Brachypodium distachyon]
          Length = 900

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/734 (32%), Positives = 391/734 (53%), Gaps = 77/734 (10%)

Query: 379  NAIKLFREMQFSSAKA-ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
             A+  F  M  +S    + RT   +L+ CA       G+ +H  +    L         L
Sbjct: 207  GALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATAL 266

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
             +MY++  +   A RVFD M                                      D 
Sbjct: 267  ANMYAKCRRPGDARRVFDRMPAR-----------------------------------DR 291

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            + WN L++G+  +G  +  + ++  MQ   G RP+  ++  VL A  + + L   RE H 
Sbjct: 292  VAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHA 351

Query: 557  YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
            + +R G D  + V T+++D+Y K   + +A++VFD M++RN V+WN++I GY   G    
Sbjct: 352  FAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATE 411

Query: 617  AKKMLNQMEEEEIKPDLVS-----------------------------------WNSLVS 641
            A  +  +M  E +    VS                                    N+L++
Sbjct: 412  ALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALIT 471

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             Y    ++  A  +   +     Y   V+W ++I G  QN +  ++++ F +MQ E++KP
Sbjct: 472  MYCKCKRTDLAAQVFDELG----YKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKP 527

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +S T+ S++     +      + IH   ++    +D YV T LIDMY+K G +  AR +F
Sbjct: 528  DSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLF 587

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
              + ++ + +WN MI G+  +G+GK A+ LF E+  +G  P+  TF ++L+AC ++GLV+
Sbjct: 588  NSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVD 647

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            EG +YF SM  DY + P +EHY  MVDLLG+AG L EAW FI+ MP +P  +++GA+LG+
Sbjct: 648  EGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGA 707

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C++H ++E AE +++R+F+LEP     + L+ N+ A ++ W+DV R+R +M++ G++   
Sbjct: 708  CKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTP 767

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
             WS +Q+   +H F +    H    +IY  L  L+ E+K +GYVPDT  ++ D++++ K 
Sbjct: 768  GWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSIH-DVEDDVKA 826

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            ++L +H+EKLAI YGL++T     I++ KN RVC DCH A K +SLV GREI +RD  RF
Sbjct: 827  QLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRF 886

Query: 1062 HHFREGECSCNDCW 1075
            HHF++G+CSC D W
Sbjct: 887  HHFKDGKCSCGDYW 900



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 223/530 (42%), Gaps = 80/530 (15%)

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           G G + R+   T +LKLC        G  VHA L  RG   +     AL N Y KCR   
Sbjct: 220 GSGPVLRT--FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPG 277

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQA 405
            A ++F  +    D + WN ++    RN   E A+ +   MQ     +  + T+V +L A
Sbjct: 278 DARRVFDRMP-ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPA 336

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
           CA   A    +++H + ++   +  ++V   ++ +Y +   ++ A +VFD M+D N  SW
Sbjct: 337 CADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSW 396

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           N+MI  Y   G    A +LF +M                                     
Sbjct: 397 NAMIKGYAENGDATEALALFKRMVGE---------------------------------- 422

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            G      SV   L A  EL  L  GR  H  ++R GL+ ++ V  +L+ MY K      
Sbjct: 423 -GVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDL 481

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---- 641
           A +VFD +  +  V+WN++I G    G   +A ++ ++M+ E +KPD  +  S++     
Sbjct: 482 AAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALAD 541

Query: 642 -----------GYSIWGQSKE------ALV----------IIHHMKNSGIYPNVVTWTSL 674
                      GYSI     +      AL+          I   + NS    +V+TW ++
Sbjct: 542 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAM 601

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           I G   + + + +++ F +M+     PN TT  S+L  C   GL+  G+E      ++  
Sbjct: 602 IHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYG 661

Query: 735 IKDAYVATG-LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           ++      G ++D+  ++G L  A    +K           M  G ++YG
Sbjct: 662 LEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP---------MEPGISVYG 702



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 154/303 (50%), Gaps = 5/303 (1%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSS 263
           + L + +  HA  ++ G  ++    V + I   Y + G   SA K F     R+   W++
Sbjct: 341 QALGACREVHAFAVRGG--FDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            ++ Y    G+  E L ++  + G+GV      +   L  C +L     G  VH  L++ 
Sbjct: 399 MIKGYAE-NGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRI 457

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G + +V++  AL+  Y KC+  + A ++F E+   +  + WN +I+   +N   E+A++L
Sbjct: 458 GLESNVNVMNALITMYCKCKRTDLAAQVFDELG-YKTRVSWNAMILGCTQNGSSEDAVRL 516

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F  MQ  + K  S T+V ++ A A +    + + IHGY ++  L+ ++ V   LI MY++
Sbjct: 517 FSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAK 576

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
             ++ +A  +F+S +D ++ +WN+MI  Y   G   VA  LF +M SS   P+  T+  +
Sbjct: 577 CGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSV 636

Query: 504 LSG 506
           LS 
Sbjct: 637 LSA 639



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 10/237 (4%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           I+  +  +   L A W    +H   I+   D DV++  AL++ Y KC  V  A  LF+  
Sbjct: 535 IIPALADISDPLQARW----IHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSA 590

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            D    + WN +I     +   + A++LF EM+ S       T + +L AC+  G   EG
Sbjct: 591 RD-RHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG 649

Query: 416 KQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYT 473
           ++    + +   LE  +     ++ +  R  KL  A      M  +  +S + +M+ +  
Sbjct: 650 QEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACK 709

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS-YQNVLTLLRGMQSLGFR 529
               V++A     ++    ++P+   ++ LL+  + + S +++V  +   M+  G +
Sbjct: 710 LHKNVELAEESAQRI--FELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQ 764


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/809 (31%), Positives = 419/809 (51%), Gaps = 70/809 (8%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA-LMNFYGKCRDVESANKLFSEVSDL 358
            +L+ C+       G  VH  +  RGF+ + +L C  L+  Y +C  V  A ++F E+ + 
Sbjct: 11   LLQRCSSAKNVDHGRRVHWHVCDRGFEQN-NLVCGHLIQMYAQCGSVPEAQQVF-EILER 68

Query: 359  EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            +D   W  +I +  +   ++ A+ +F +MQ         T V +L ACA   +  +G +I
Sbjct: 69   KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEI 128

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            HG +L+   E ++ V   LI+MY++                                G V
Sbjct: 129  HGQILQQGFEGDVFVGTALINMYNK-------------------------------CGSV 157

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
              AW  F ++       D+++W  +++    H  +     L R MQ  G  PN  ++  V
Sbjct: 158  RGAWDSFKRLE----HRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTV 213

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
              A  +   L  G+  +  +    ++ D+ V  S M+M+     L +A+ +F++M +R++
Sbjct: 214  FNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDV 273

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
            V WN +I+ Y     F  A ++  +++++ IK + +++  +++ Y+      +  VI   
Sbjct: 274  VTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHEL 333

Query: 659  MKNSG-------------IY------------------PNVVTWTSLISGSLQNENYRES 687
            +K +G             +Y                   +V+TWT +     QN   +E+
Sbjct: 334  VKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEA 393

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            L+ F +MQ E  +P S T+ ++L TC  L  LQ G++IH   ++NGF  +  V T LI+M
Sbjct: 394  LQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINM 453

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y K G +  AR VF K A + +  WN M+  +A +G   E + LF+++   G + DA++F
Sbjct: 454  YGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSF 513

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
             ++L+A  +SG V +G++YF +M  D++I PT E Y C+VDLLG+AG + EA D +  + 
Sbjct: 514  VSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLS 573

Query: 868  -FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
               PD  +W  LLG+CR H   + A+ A+ ++ + +P +S  Y ++ N+ A +  W+ V 
Sbjct: 574  GCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVN 633

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            R+R  M   GVK     S I+I   VH F      HP    IY EL  L SEM+  GY+P
Sbjct: 634  RMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIP 693

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            DT+ +  D+++E K  +L  H+E+LAI +GLM T    P+RVIKN RVCSDCHTA KY+S
Sbjct: 694  DTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYIS 753

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +RGREI +RD  RFH+F++G CSC D W
Sbjct: 754  KLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 237/522 (45%), Gaps = 70/522 (13%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           V +LQ C+       G+++H +V     E N  VC  LI MY++   +  A +VF+ ++ 
Sbjct: 9   VALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILER 68

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            ++ +W  MI  Y   G  D A  +F +M    + P  +T+                   
Sbjct: 69  KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTY------------------- 109

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
                             +L A      LK G E HG IL+ G + D++VGT+L++MY K
Sbjct: 110 ----------------VAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNK 153

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
              ++ A + F  +++R++V+W ++I+       F  A+ +  +M+ + + P+ ++  ++
Sbjct: 154 CGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTV 213

Query: 640 VSGYSIWGQSKEALVI-------------------IHHMKNSGIY------------PNV 668
            + Y       E   I                   ++   N+G+              +V
Sbjct: 214 FNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDV 273

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           VTW  +I+  +QNEN+ E+++ F ++QQ+ IK N  T   +L     L  L  GK IH L
Sbjct: 274 VTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHEL 333

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             + G+ +D  VAT L+ +Y +      A ++F    +K + +W  M + +A  G  KEA
Sbjct: 334 VKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEA 393

Query: 789 ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS-MSTDYNIIPTIEHYSCMV 847
           + LF E+   G +P + T  A+L  C +   +++G +     +   + +   +E  + ++
Sbjct: 394 LQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVE--TALI 451

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLE 889
           ++ GK G + EA      M  K D  +W ++LG+   HG+ +
Sbjct: 452 NMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHGYYD 492



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/567 (21%), Positives = 231/567 (40%), Gaps = 77/567 (13%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y + G    A + F +   +    W+  +  Y    G+    L ++ ++  + V+ 
Sbjct: 46  LIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQ-QGDYDRALGMFYQMQEEDVMP 104

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
                  IL  C    +   G+E+H  ++++GF+ DV +  AL+N Y KC  V  A   F
Sbjct: 105 TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSF 164

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             + +  D + W  +I   ++++++  A  L+R MQ         T+  +  A       
Sbjct: 165 KRL-EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYL 223

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            EGK I+  V    +ES++ V N  ++M+     L  A R+F+ M D ++ +WN +I+ Y
Sbjct: 224 SEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFY 283

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                   A  LF      R+Q D                              G + N 
Sbjct: 284 VQNENFGEAVRLF-----GRLQQD------------------------------GIKAND 308

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            +  ++L   T L  L  G+  H  +   G D D+ V T+LM +Y + +    A ++F +
Sbjct: 309 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVD 368

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--------------------- 631
           M +++++ W  +   Y   G    A ++  +M+ E  +P                     
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 428

Query: 632 --------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                         ++V   +L++ Y   G+  EA  +   M       +++ W S++  
Sbjct: 429 RQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKR----DILVWNSMLGA 484

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             Q+  Y E+L+ F QMQ +  K ++ +  S+L      G + +G +     L++  I  
Sbjct: 485 YAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITP 544

Query: 738 AYVATG-LIDMYSKSGNLKSAREVFRK 763
                G ++D+  ++G ++ A ++  K
Sbjct: 545 TPELYGCVVDLLGRAGRIQEAVDIVLK 571



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 167/382 (43%), Gaps = 33/382 (8%)

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
           F+P+ +    +LQ  +  + + +GR  H ++   G + +  V   L+ MY +   +  AQ
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------N 637
           +VF+ ++ +++ AW  +I  YC +G +  A  M  QM+EE++ P  V++           
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 638 SLVSGYSIWGQSKE---------ALVIIHHMKNSGI------------YPNVVTWTSLIS 676
           SL  G  I GQ  +            +I+     G             + +VV+WT++I+
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
             +Q++ +  +   + +MQ + + PN  T+ ++    G    L  GK I+ L        
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
           D  V    ++M+  +G L  AR +F    ++ + +WN +I  +    N  EA+ LF  L 
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
           + G + + ITF  +L    +   + +G K    +  +      +   + ++ L G+    
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359

Query: 857 DEAWDFIRTMPFKPDATIWGAL 878
            +AW     M  K D   W  +
Sbjct: 360 GQAWKIFVDMGSK-DVITWTVM 380


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/770 (34%), Positives = 412/770 (53%), Gaps = 88/770 (11%)

Query: 315  EVHASLIKRGFDFD------VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
            ++HA +++ G  FD      +   CAL         ++ A K+F ++    +   WN +I
Sbjct: 48   QLHAHMLRTGLFFDPPSATKLFTACAL----SSPSSLDYACKVFDQIPR-PNLYTWNTLI 102

Query: 369  MVKLRNEKWENAIKLFREMQFSSAK-AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
                 + K    + +F +M   S +   S T   +++A  +V +   G+ IHG V+K++ 
Sbjct: 103  RAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASF 162

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             S+L + N LI  YS                                LG +D A+ +F+K
Sbjct: 163  GSDLFISNSLIHFYS-------------------------------SLGDLDSAYLVFSK 191

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            +    ++ DI++WN ++SG    GS +  L L + M+    RPN  ++  VL A  +   
Sbjct: 192  I----VEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRID 247

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L++GR +  YI RNG+D +L +  +++DMYVK   L++A                     
Sbjct: 248  LEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDA--------------------- 286

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                      +++ ++MEE+    D+VSW +++ GY+  G    A  +   M       +
Sbjct: 287  ----------RRLFDKMEEK----DIVSWTTMIDGYAKVGDYDAARRVFDVMPRE----D 328

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            +  W +LIS   QN   +E+L  F ++Q  ++ KPN  T++S L  C  LG +  G  IH
Sbjct: 329  ITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIH 388

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
                K G   + ++ T LIDMYSK G+L+ A EVF     + +  W+ MI G A++G+G+
Sbjct: 389  VYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGR 448

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
             AI LF ++ ET  +P+A+TFT LL AC +SGLV+EG  +F+ M   Y ++P  +HY+CM
Sbjct: 449  AAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACM 508

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VD+LG+AG L+EA + I  MP  P A++WGALLG+CRI+G++E AE+A  RL + +  N 
Sbjct: 509  VDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNH 568

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
              Y L+ N+ A + +W+ V RLR  M   G++     S I+++ I+H F      HP + 
Sbjct: 569  GAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLST 628

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE-EKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
            EIY +L  +V+ +K  GYV D   + Q ++EE  K   L  H+EKLAI YGL++ +   P
Sbjct: 629  EIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQP 688

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IR++KN RVC DCH+ AK +S +  R+I LRD  RFHHF  G CSC D W
Sbjct: 689  IRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 253/509 (49%), Gaps = 15/509 (2%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTS---AAKAFFLYFSRSYADWSSFLE 266
           +K  HA M++ G  ++     K  +F        +S   A K F      +   W++ + 
Sbjct: 46  LKQLHAHMLRTGLFFDPPSATK--LFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIR 103

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            + S    +Q LL     LH       S     ++K  T++ +   G  +H  ++K  F 
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D+ +  +L++FY    D++SA  +FS++ + +D + WN +I   ++    E A++LF+ 
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVE-KDIVSWNSMISGFVQGGSPEEALQLFKR 222

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+  +A+    T+V +L ACAK      G+    Y+ ++ ++ NL + N ++ MY +   
Sbjct: 223 MKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGS 282

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           LE A R+FD M++ ++ SW +MI  Y  +G  D A  +F+ M     + DI  WN L+S 
Sbjct: 283 LEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMP----REDITAWNALISS 338

Query: 507 HFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
           +  +G  +  L + R +Q +   +PN  +++  L A  +L  +  G   H YI + G+  
Sbjct: 339 YQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKL 398

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           + ++ TSL+DMY K   L+ A EVF +++ R++  W+++I+G    G    A  + ++M+
Sbjct: 399 NFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQ 458

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENY 684
           E ++KP+ V++ +L+   S  G   E  +  + M+   G+ P    +  ++    +    
Sbjct: 459 ETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCL 518

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            E+++   +M    I P+++   +LL  C
Sbjct: 519 EEAVELIEKMP---IVPSASVWGALLGAC 544



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 109/286 (38%), Gaps = 51/286 (17%)

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM--YSKSGNLKSA 757
           K N +T+  L+  C     L   K++H   L+ G   D   AT L      S   +L  A
Sbjct: 27  KSNPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYA 83

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQPDAITFTALLAACKN 816
            +VF +     L +WN +I  FA      + +L+F ++L E+   P++ TF  ++ A   
Sbjct: 84  CKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATE 143

Query: 817 -----SGLVEEGWKYFDSMSTDYNIIPTIEH-YSCMVDL--------------------- 849
                +G    G     S  +D  I  ++ H YS + DL                     
Sbjct: 144 VSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSM 203

Query: 850 ---LGKAGYLDEAWDFIRTMPF---KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
                + G  +EA    + M     +P+      +L +C     LE+   A   + +   
Sbjct: 204 ISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIER--- 260

Query: 904 CNSANYNL-----MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            N  + NL     M+++       ED  RL   M+E   K ++ W+
Sbjct: 261 -NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEE---KDIVSWT 302


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/746 (33%), Positives = 389/746 (52%), Gaps = 71/746 (9%)

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            HL   L+       D   A +LF  +    D    + +I     +     AIK++  +Q 
Sbjct: 99   HLGLRLIRVALNVGDFNRARQLFDNIPQ-PDPTTCSTLISALTTHGLSNEAIKIYSSLQE 157

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               K      +   +ACA  G     K++H    +  + S++ V N LI  Y +   +E 
Sbjct: 158  RGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEG 217

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A RVFD +                                   +  D+++W  L S +  
Sbjct: 218  ARRVFDDL-----------------------------------VVRDVVSWTSLSSCYVK 242

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
             G  +  + + R M   G +PN  +VS +L A  EL+ LK G+E HG+ +R+G+  +L+V
Sbjct: 243  CGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFV 302

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             ++L+ +Y K   ++ A+ VFD M +R                                 
Sbjct: 303  CSALVSLYAKCLSVREARMVFDLMPHR--------------------------------- 329

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
              D+VSWN +++ Y    + ++   +   M   G+  +  TW ++I G ++N    E+++
Sbjct: 330  --DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVE 387

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F +MQ+   KPN  T+SS+L  C     L+ GKEIHC   ++  + D    T L+ MY+
Sbjct: 388  MFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYA 447

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G+L  +R VF     K + +WN MI+  A++GNGKEA+ LF ++L +  QP+++TFT 
Sbjct: 448  KCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTG 507

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L+ C +S LVEEG + F+SM  D+ + P   HYSC+VD+  +AG L+EA+ FI+ MP +
Sbjct: 508  VLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME 567

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            P A+ WGALL +CR++ ++E A+I++++LF++EP N  NY  + N+L  +  W +  ++R
Sbjct: 568  PTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVR 627

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              M E G+      SW+Q+   VH F      +  + +IY  L  LV +MK  GY PDT 
Sbjct: 628  ILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTD 687

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V QDID+EEK + L +H+EKLA+ +G++    ++ IRV KN R+C DCH A KYMS V 
Sbjct: 688  YVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVV 747

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
            G  I +RD  RFHHF+ G CSC D W
Sbjct: 748  GVIIVVRDSLRFHHFKNGNCSCKDLW 773



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 236/482 (48%), Gaps = 6/482 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI   L  GDF  A + F           S+ +    + G    E ++++  L  +G+  
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLS-NEAIKIYSSLQERGIKP 162

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
              +     K C          EVH    + G   DV +  AL++ YGKC+ VE A ++F
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 222

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            ++  + D + W  +    ++       + +FREM +S  K    T+  +L ACA++   
Sbjct: 223 DDLV-VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 281

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             GK+IHG+ ++  +  NL VC+ L+S+Y++   +  A  VFD M   ++ SWN ++++Y
Sbjct: 282 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 341

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                 +  +SLF KM+   ++ D  TWN ++ G   +G  +  + + R MQ +GF+PN 
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 401

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++S +L A +    L+ G+E H Y+ R+    DL   T+L+ MY K   L  ++ VFD 
Sbjct: 402 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 461

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           M+ +++VAWN++I      G    A  + ++M    ++P+ V++  ++SG S     +E 
Sbjct: 462 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 521

Query: 653 LVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           + I + M ++  + P+   ++ ++    +     E+ KF   M  E   P ++   +LL 
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME---PTASAWGALLA 578

Query: 712 TC 713
            C
Sbjct: 579 AC 580


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 679

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/718 (32%), Positives = 401/718 (55%), Gaps = 70/718 (9%)

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
             SS+KA+ +T++K      ++ +  + KQ+H   +++   S+ S  + +IS+Y+    L 
Sbjct: 1    MSSSKALIKTLIK---NPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLH 56

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A  VF +++   + +W S+I  +T         SLF++  +S ++              
Sbjct: 57   EALLVFKTLESPPVLAWKSVIRCFTD-------QSLFSRALASFVE-------------- 95

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                          M++ G  P+ +    VL++ T +  L++G   HG+I+R G+D DLY
Sbjct: 96   --------------MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
             G +LM+MY K   + + ++VF+ M  +++V++N++I+GY   G++ +A +M+ +M   +
Sbjct: 142  TGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSD 201

Query: 629  IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV-------------------- 668
            +KPD  + +S++  +S +    +   I  ++   GI  +V                    
Sbjct: 202  LKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 261

Query: 669  -----------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
                       ++W SL++G +QN  Y E+L+ F QM    ++P +   SS++  C  L 
Sbjct: 262  RVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLA 321

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             L  GK++H   L+ GF ++ ++A+ L+DMYSK GN+++AR++F +       SW  +IM
Sbjct: 322  TLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIM 381

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            G A++G+G EA+ LF E+   G +P+ + F A+L AC + GLV+E W YF+SM+  Y + 
Sbjct: 382  GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 441

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
              +EHY+ + DLLG+AG L+EA+DFI  M  +P  ++W  LL SC +H +LE AE  + +
Sbjct: 442  QELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 501

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            +F ++  N   Y LM N+ A + RW+++ +LR  + + G++     SWI++    H F +
Sbjct: 502  IFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVS 561

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
                HP+   I   L  ++ +M+K GYV DT  V  D+DEE K ++L  H+E+LA+ +G+
Sbjct: 562  GDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGI 621

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + T+    IRV KN R+C+DCH A K++S +  REI +RD +RFHHF  G CSC D W
Sbjct: 622  INTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 241/518 (46%), Gaps = 43/518 (8%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            +    + +  S  K  HAQ I+   + ++   +   I+  L+      A   F    S 
Sbjct: 11  LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKL--LHEALLVFKTLESP 68

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               W S +  +          L  + E+   G      +   +LK CT +M    G  V
Sbjct: 69  PVLAWKSVIRCFTD-QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H  +++ G D D++   ALMN Y K   ++S  K+F E+   +D + +N +I    ++  
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF-ELMPRKDVVSYNTVIAGYAQSGM 186

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
           +E+A+++ REM  S  K  + T+  +L   ++     +GK+IHGYV++  ++S++ + + 
Sbjct: 187 YEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSS 246

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           L+ MY+++ ++E + RVF  +   +  SWNS+++ Y   G  + A  LF +M S+++   
Sbjct: 247 LVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKV--- 303

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
                                           RP   + S V+ A   L  L  G++ HG
Sbjct: 304 --------------------------------RPGAVAFSSVIPACAHLATLHLGKQLHG 331

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
           Y+LR G   ++++ ++L+DMY K   +Q A+++FD M   + V+W ++I G+   G    
Sbjct: 332 YVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHE 391

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLI 675
           A  +  +M+ + +KP+ V++ ++++  S  G   EA    + M K  G+   +  + ++ 
Sbjct: 392 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 451

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               +     E+  F  +M+   ++P  +  S+LL +C
Sbjct: 452 DLLGRAGKLEEAYDFISKMR---VEPTGSVWSTLLSSC 486


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Cucumis sativus]
          Length = 797

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 273/823 (33%), Positives = 415/823 (50%), Gaps = 91/823 (11%)

Query: 301  LKLCTKL--MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD- 357
            L+LC+     +F L   VHA +I  GF    H    L+  Y K  +V  A +LF E+ + 
Sbjct: 18   LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNP 77

Query: 358  -------------------------------LEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
                                           + D + +N +I     N    +A++LFR 
Sbjct: 78   DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 387  MQFSSAKAISRTIVKMLQACAK-VGAFHEGKQIHGYVLKSALES-NLSVCNCLISMY-SR 443
            M+    +    T   +L A    VG   +  Q+H  V+K+ +   + SV N L+S+Y  R
Sbjct: 138  MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 444  NNKLEL-------ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
             ++L +       A ++FD M   +  +W +MI+ Y     ++ A  +F  M    ++  
Sbjct: 198  ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM----VENL 253

Query: 497  IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
               WN ++SG+   G +Q  LTL R M+ LG + +  + + ++ A   +   + G++ H 
Sbjct: 254  GAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHA 313

Query: 557  YILRNGLD----YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            YIL+N L+    + L V  +L+ +Y KN+ +  A+++F  M  RN               
Sbjct: 314  YILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRN--------------- 358

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                                +++WN+++SGY   G+ +EA      M       N++T T
Sbjct: 359  --------------------IITWNAILSGYVNAGRMEEAKSFFEEMP----VKNLLTLT 394

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
             +ISG  QN    E LK F QM+ +  +P     +  L  C  LG L+NG+++H   +  
Sbjct: 395  VMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHL 454

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G+     V   +I MY+K G +++A  VF    +  L SWN MI     +G+G +AI LF
Sbjct: 455  GYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELF 514

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             ++L+ G  PD ITF  +L AC ++GLVE+G  YF+SM   Y I P  +HY+ MVDL  +
Sbjct: 515  DQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCR 574

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG    A   I +MP KP A +W ALL  CRIHG+++    A+ +LFKL P N   Y L+
Sbjct: 575  AGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLL 634

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A   RW DV ++R  M +  V+     SWI+++  VHVF  +   HP    +Y  L
Sbjct: 635  SNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYL 694

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L  EMKKLGY+PDT+ V  D++ E+K   L +H+EKLA+ +G+MK    A +RV KN 
Sbjct: 695  EQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNI 754

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH A K+MS V  REI +RD  RFHHF+ G+CSC D W
Sbjct: 755  RICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 255/547 (46%), Gaps = 69/547 (12%)

Query: 177 PPTDTLAKQAQLSCISSGFC----FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS 232
           P + +LA+      I+SGF     FLN   +  C SS      Q+ +  +I N D + ++
Sbjct: 26  PASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFE--EIPNPDAIART 83

Query: 233 -LIFHYLEFGDFTSAAKAF--FLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
            LI  Y   G+     + F     + R    +++ +  Y +  G+    LE++  +    
Sbjct: 84  TLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGY-AHNGDGHSALELFRAMRRDD 142

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVE-----VHASLIKRGFD-FDVHLKCALMNFYGK-- 341
             FR    T    L    +  ++G E     +H +++K G       +  AL++ Y K  
Sbjct: 143 --FRPDDFTFTSVLSA--LVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRA 198

Query: 342 ------CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK------------------- 376
                 C  + SA KLF E+    D+L W  +I   +RN+                    
Sbjct: 199 SELGIPCSAMVSARKLFDEMPK-RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 377 ------------WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
                       ++ A+ L R+M+F   +    T   ++ ACA VG+F  GKQ+H Y+LK
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK 317

Query: 425 SALESN----LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
           + L  N    LSV N LI++Y +NNK++ A ++F +M   N+ +WN+++S Y   G ++ 
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
           A S F +M       +++T   ++SG   +G     L L + M+  GF P   + +  L 
Sbjct: 378 AKSFFEEMPVK----NLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALT 433

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
           A + L  L+ GR+ H  ++  G +  L VG +++ MY K   ++ A+ VF  M + ++V+
Sbjct: 434 ACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVS 493

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           WNS+I+     G  V A ++ +QM +E + PD +++ ++++  S  G  ++     + M 
Sbjct: 494 WNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSML 553

Query: 661 NS-GIYP 666
            S GI P
Sbjct: 554 ESYGITP 560


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/746 (33%), Positives = 389/746 (52%), Gaps = 71/746 (9%)

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            HL   L+       D   A +LF  +    D    + +I     +     AIK++  +Q 
Sbjct: 13   HLGLRLIRVALNVGDFNRARQLFDNIPQ-PDPTTCSTLISALTTHGLSNEAIKIYSSLQE 71

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               K      +   +ACA  G     K++H    +  + S++ V N LI  Y +   +E 
Sbjct: 72   RGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEG 131

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A RVFD +                                   +  D+++W  L S +  
Sbjct: 132  ARRVFDDL-----------------------------------VVRDVVSWTSLSSCYVK 156

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
             G  +  + + R M   G +PN  +VS +L A  EL+ LK G+E HG+ +R+G+  +L+V
Sbjct: 157  CGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFV 216

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             ++L+ +Y K   ++ A+ VFD M +R                                 
Sbjct: 217  CSALVSLYAKCLSVREARMVFDLMPHR--------------------------------- 243

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
              D+VSWN +++ Y    + ++   +   M   G+  +  TW ++I G ++N    E+++
Sbjct: 244  --DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVE 301

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F +MQ+   KPN  T+SS+L  C     L+ GKEIHC   ++  + D    T L+ MY+
Sbjct: 302  MFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYA 361

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G+L  +R VF     K + +WN MI+  A++GNGKEA+ LF ++L +  QP+++TFT 
Sbjct: 362  KCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTG 421

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L+ C +S LVEEG + F+SM  D+ + P   HYSC+VD+  +AG L+EA+ FI+ MP +
Sbjct: 422  VLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME 481

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            P A+ WGALL +CR++ ++E A+I++++LF++EP N  NY  + N+L  +  W +  ++R
Sbjct: 482  PTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVR 541

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              M E G+      SW+Q+   VH F      +  + +IY  L  LV +MK  GY PDT 
Sbjct: 542  ILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTD 601

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V QDID+EEK + L +H+EKLA+ +G++    ++ IRV KN R+C DCH A KYMS V 
Sbjct: 602  YVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVV 661

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
            G  I +RD  RFHHF+ G CSC D W
Sbjct: 662  GVIIVVRDSLRFHHFKNGNCSCKDLW 687



 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 236/482 (48%), Gaps = 6/482 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI   L  GDF  A + F           S+ +    + G    E ++++  L  +G+  
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLS-NEAIKIYSSLQERGIKP 76

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
              +     K C          EVH    + G   DV +  AL++ YGKC+ VE A ++F
Sbjct: 77  DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            ++  + D + W  +    ++       + +FREM +S  K    T+  +L ACA++   
Sbjct: 137 DDLV-VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 195

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             GK+IHG+ ++  +  NL VC+ L+S+Y++   +  A  VFD M   ++ SWN ++++Y
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                 +  +SLF KM+   ++ D  TWN ++ G   +G  +  + + R MQ +GF+PN 
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++S +L A +    L+ G+E H Y+ R+    DL   T+L+ MY K   L  ++ VFD 
Sbjct: 316 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 375

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           M+ +++VAWN++I      G    A  + ++M    ++P+ V++  ++SG S     +E 
Sbjct: 376 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 435

Query: 653 LVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           + I + M ++  + P+   ++ ++    +     E+ KF   M  E   P ++   +LL 
Sbjct: 436 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME---PTASAWGALLA 492

Query: 712 TC 713
            C
Sbjct: 493 AC 494


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/675 (34%), Positives = 367/675 (54%), Gaps = 82/675 (12%)

Query: 401  KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            ++L +C  +       QIH  ++ S  + + S+ + LI++YS  +K +LA  VFDS  + 
Sbjct: 57   RLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPN- 111

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
                                              P  I WN ++  +     Y   L + 
Sbjct: 112  ----------------------------------PSRILWNSMIRAYTRSKQYNEALEMY 137

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
              M                                  + + GL+ D+++G  L+DMY K 
Sbjct: 138  YCM----------------------------------VEKGGLERDVFIGAGLVDMYSKM 163

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
              L+ A+EVFD M  R++VAWN++I+G         A+++ +QM ++    D VSW +++
Sbjct: 164  GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQ----DDVSWGTMM 219

Query: 641  SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
            +GY+  G   E L +   MK        VTW  +I+  +QN + +E++  F QM+ E+  
Sbjct: 220  AGYAHNGCFVEVLELFDKMKLGN-----VTWNVIIAAYMQNGHAKEAISSFHQMRLENFH 274

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
            PNS T  S+L     L   + G   H   ++ GF+ +  V   LIDMY+K G L  + ++
Sbjct: 275  PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKL 334

Query: 761  FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
            F +  +K   SWN M+ G+A++G+G  AI LF  + E+  Q D+++F ++L+AC+++GLV
Sbjct: 335  FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLV 394

Query: 821  EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            EEG K F SMS  Y+I P +EHY+CMVDLLG+AG  DE   FI+ MP +PDA +WGALLG
Sbjct: 395  EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLG 454

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
            SCR+H +++  E+A   L KLEP N A++ ++ ++ A S RW D  + R  M+++G+K  
Sbjct: 455  SCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKT 514

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
               SW+++   VH F      HP    ++     L+ +M+K+GYVPD  CV Q+++EE+K
Sbjct: 515  PGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDK 574

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
               L SH+E+LAI + L+ T   + I+++KN RVC+DCHT  K++S +  R I +RD  R
Sbjct: 575  EMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATR 634

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF +G CSCND W
Sbjct: 635  FHHFEDGICSCNDYW 649



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 191/404 (47%), Gaps = 20/404 (4%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           +++HA +I  GF    H    L+N Y      + A  +F    +    +LWN +I    R
Sbjct: 69  LQIHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPN-PSRILWNSMIRAYTR 126

Query: 374 NEKWENAIKLFREMQFSSAKAISRTI---VKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
           ++++  A++++  M       + R +     ++   +K+G     +++   + K     +
Sbjct: 127 SKQYNEALEMYYCM--VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR----D 180

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           +   N +I+  S++    +A RVFD M D +  SW +M++ Y   G       LF+KM  
Sbjct: 181 VVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKL 240

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                  +TWN +++ +  +G  +  ++    M+   F PN  +   VL A   L   + 
Sbjct: 241 GN-----VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFRE 295

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           G   H  I++ G   +  VG SL+DMY K   L  ++++F+ M +++ V+WN+++SGY  
Sbjct: 296 GMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAV 355

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVV 669
            G    A  + + M+E +++ D VS+ S++S     G  +E   I H M +   I P++ 
Sbjct: 356 HGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLE 415

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +  ++    +   + E+L F   M    ++P++    +LL +C
Sbjct: 416 HYACMVDLLGRAGLFDETLGFIKVMP---VEPDAGVWGALLGSC 456



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 151/327 (46%), Gaps = 16/327 (4%)

Query: 349 NKLFSEVSDLED-----DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
           N  F EV +L D     ++ WN II   ++N   + AI  F +M+  +    S T V +L
Sbjct: 225 NGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 284

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            A A + AF EG   H  +++    SN  V N LI MY++  +L+ + ++F+ M   +  
Sbjct: 285 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 344

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           SWN+M+S Y   G+ D A +LF+ M  S++Q D +++  +LS     G  +    +   M
Sbjct: 345 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 404

Query: 524 QS-LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                 +P+    + ++  +    L     E+ G+I    ++ D  V  +L+     +  
Sbjct: 405 SDKYHIKPDLEHYACMVDLLGRAGLFD---ETLGFIKVMPVEPDAGVWGALLGSCRMHSN 461

Query: 583 LQNAQEVFDN---MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL-VSWNS 638
           ++  +   D+   ++ RN   +  L S Y   G + +A K  ++M +  +K     SW  
Sbjct: 462 VKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVE 521

Query: 639 L---VSGYSIWGQSKEALVIIHHMKNS 662
           L   V  + +  +S   L  +H + N+
Sbjct: 522 LKNKVHAFRVGDKSHPQLESMHLLWNT 548



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 3/184 (1%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+  +  Y    G  +E +  + ++  +     S     +L     L AF  G+  HA +
Sbjct: 245 WNVIIAAYMQ-NGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACI 303

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           I+ GF  +  +  +L++ Y KC  ++ + KLF+E+ D +D + WN ++     +   + A
Sbjct: 304 IQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM-DHKDTVSWNAMLSGYAVHGHGDRA 362

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI-HGYVLKSALESNLSVCNCLIS 439
           I LF  MQ S  +  S + V +L AC   G   EG++I H    K  ++ +L    C++ 
Sbjct: 363 IALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVD 422

Query: 440 MYSR 443
           +  R
Sbjct: 423 LLGR 426


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 279/901 (30%), Positives = 439/901 (48%), Gaps = 154/901 (17%)

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            R  ++W S L           + +  +  +   GV   +     +LK    +    LG +
Sbjct: 47   RLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQ 106

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +HA + K G      +  +L+N YGKC D+++A ++F E+++  DD+ WN +I    R E
Sbjct: 107  LHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITN-RDDVSWNSMINAACRFE 165

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAK-VGAFHEGKQIHGYVLKSALESNLSVC 434
            +WE A+ LFR M   +    S T+V +  AC+  +     GKQ+H +VL++         
Sbjct: 166  EWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-------- 217

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
                                    D    + N++++ Y  LG V  A +LF+  +     
Sbjct: 218  ------------------------DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDK--- 250

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D+++WN ++S    +  ++  L  L  M   G RPNG +++ VL A + L +L  G+E 
Sbjct: 251  -DLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEI 309

Query: 555  HGYIL-RNGLDYDLYVGTSLMDM-------------------------------YVKNDC 582
            H ++L  N L  + +VG +L+DM                               YV+N+ 
Sbjct: 310  HAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEF 369

Query: 583  LQNAQEVFDNMK-------------------------------NRNIVAW---------N 602
               A E+F  M                                +  +V W         N
Sbjct: 370  DYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQN 429

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
            +L+  Y   G    A+ +   M     + D+VSWN++++GY + G+  +AL ++H M+  
Sbjct: 430  ALMDMYSRMGRIEIARSIFGSMN----RKDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 485

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                 + T+          ++Y ++  F        +KPNS T+ ++L  C  L  L  G
Sbjct: 486  QAEHRINTF----------DDYEDNKNF-------PLKPNSVTLMTVLPGCAALAALGKG 528

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            KEIH   +K    KD  V + L+DMY+K G L  +R VF + + + + +WN +IM + ++
Sbjct: 529  KEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMH 588

Query: 783  GNGKEAILLFHELLETG-----FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            G G+EA+ LF  ++E G      +P+ +T+ A+ A+  +SG+V+EG   F +M   + I 
Sbjct: 589  GKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIE 648

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF---KPDATIWGALLGSCRIHGHLEYAEIA 894
            PT +HY+C+VDLLG++G ++EA++ I+TMP    K DA  W +LLG+C+IH +LE  EIA
Sbjct: 649  PTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDA--WSSLLGACKIHQNLEIGEIA 706

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            ++ LF L+P N  +Y    ++L               M E GV+     SWI+    VH 
Sbjct: 707  AKNLFVLDP-NVLDYGTKQSMLG------------RKMKEKGVRKEPGCSWIEHGDEVHK 753

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F A    HP + E++  L  L   MKK GYVPDT CV  ++ EEEK  +L  H+E+LAI 
Sbjct: 754  FLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIA 813

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +GL+ T     IRV KN RVC+DCH A K++S +  REI LRD  RFHHFR G CSC D 
Sbjct: 814  FGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDY 873

Query: 1075 W 1075
            W
Sbjct: 874  W 874



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 233/522 (44%), Gaps = 43/522 (8%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + G    A   F ++  +    W++ +    S     +E L     +   GV 
Sbjct: 226 ALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSL-SQNDRFEEALLYLHVMLQSGVR 284

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHA------SLIKRGFDFDVHLKCALMNFYGKCRDV 345
                L  +L  C+ L     G E+HA       LI+  F     + CAL++ Y  C+  
Sbjct: 285 PNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSF-----VGCALVDMYCNCKQP 339

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS-SAKAISRTIVKMLQ 404
           E    +F  +       +WN +I   +RNE    AI+LF EM F       S T+  +L 
Sbjct: 340 EKGRLVFDGMFR-RTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLP 398

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           AC +  +F + + IH  V+K   E +  V N L+ MYSR  ++E+A  +F SM   ++ S
Sbjct: 399 ACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVS 458

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           WN+MI+ Y   G  D A +L + M   + +  I T++           Y++        +
Sbjct: 459 WNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFD----------DYED-------NK 501

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
           +   +PN  ++  VL     L  L  G+E H Y ++  L  D+ VG++L+DMY K  CL 
Sbjct: 502 NFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLN 561

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-----EIKPDLVSWNSL 639
            ++ VF+ M  RN++ WN LI  Y   G    A K+  +M EE     EI+P+ V++ ++
Sbjct: 562 LSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAI 621

Query: 640 VSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            +  S  G   E L + + MK   GI P    +  L+    ++    E+      M    
Sbjct: 622 FASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNM 681

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            K ++   SSLL  C     +    EI  +  KN F+ D  V
Sbjct: 682 KKVDA--WSSLLGACK----IHQNLEIGEIAAKNLFVLDPNV 717


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/610 (36%), Positives = 363/610 (59%), Gaps = 10/610 (1%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            ++ +Y+  G   VA  +F++     ++ +++ +N ++  +  +  Y   L++ + M S  
Sbjct: 77   LMRAYSAQGETSVARYIFDR----SLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            F P+  +   VL+A + L  L+ G + H  I++ GLD +L++G +L+ MY K  CL+ A+
Sbjct: 133  FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREAR 192

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL--VSGYSI 645
            +V D M  R++V+WNS+++GY   G F +A ++  +M+   +  D  +  SL  V  Y+ 
Sbjct: 193  KVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYT- 251

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
               S E +  IH+M       N+++W  +I+  + N    E++  F+QM++  +KP++ T
Sbjct: 252  ---SLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVT 308

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
            ++SLL  CG L  L  G+ +H    K     +  +   L+DMY+K G L+ AR+VF K  
Sbjct: 309  IASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMR 368

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
             + + SW  M+  +   G G +A+ LF ++L++G  PD+I F ++L+AC ++GL+++G  
Sbjct: 369  LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            YF  M+  Y I+P IEH++CMVDL G+AG ++EA+ FI+ MP +P+  +WGALL +CR+H
Sbjct: 429  YFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 488

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
              ++   +A+  LF+L P  S  Y L+ N+ A +  W+DV  +R++M ++G+K V   S 
Sbjct: 489  SKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISN 548

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            ++++  VH F A    HP    IY EL  LV +MK+LGY+P T     D++ E+K   L 
Sbjct: 549  VELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLA 608

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+EKLAIV+ ++ TK   PIR+ KN RVC DCH A K +S +  R I +RD  RFHHF 
Sbjct: 609  IHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFS 668

Query: 1066 EGECSCNDCW 1075
             G CSC D W
Sbjct: 669  NGICSCGDYW 678



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 211/473 (44%), Gaps = 52/473 (10%)

Query: 288 KGVIFRSRILTIILKL-------CTKLMAFWLGVE----VHASL-IKRGFDFDVHLKCAL 335
           +G++  +RI    LK+       C  ++  + G++    +H+ + I      D  L   L
Sbjct: 18  RGIVSSTRIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKL 77

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLW-NEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           M  Y    +   A  +F     LE ++++ N +I   + N  +  A+ +F+ M   +   
Sbjct: 78  MRAYSAQGETSVARYIFDR--SLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNP 135

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T   +L+AC+ +     G Q+H  ++K  L++NL + N L++MY +   L  A +V 
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD------------------ 496
           D M   ++ SWNSM++ Y   G  D A  +  +M+S  +  D                  
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLEN 255

Query: 497 ---------------IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                          +I+WN +++ +  +      ++L   M+  G +P+  +++ +L A
Sbjct: 256 VQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
             +L  L  GR  H YI +  L  +L +  +L+DMY K  CL+ A++VFD M+ R++V+W
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSW 375

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            S++S Y   G   +A  +  +M +    PD +++ S++S  S  G   +       M  
Sbjct: 376 TSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTE 435

Query: 662 S-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             GI P +  +  ++    +     E+  F  QM  E   PN     +LL  C
Sbjct: 436 QYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPME---PNERVWGALLSAC 485



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 21/255 (8%)

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
           D  +A  L+  YS  G    AR +F +S  K +  +N MI  +       EA+ +F  +L
Sbjct: 70  DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM---STDYNIIPTIEHYSCMVDLLGKA 853
              F PD  TF  +L AC     +  G +  D++     D N+       + +V + GK 
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG----NALVAMYGKC 185

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
           G L EA   +  MP++ D   W +++      G  + A    + +  L   + A     +
Sbjct: 186 GCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL 244

Query: 914 NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
           + +      E+V+ + +  + +  K+++ W     + ++ ++     P+ A         
Sbjct: 245 SPVVCYTSLENVQYIHNMFERMTKKNLISW-----NVMIAIYVNNSMPNEAVS------- 292

Query: 974 HLVSEMKKLGYVPDT 988
            L  +M++ G  PD 
Sbjct: 293 -LFLQMEECGMKPDA 306


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/883 (30%), Positives = 434/883 (49%), Gaps = 70/883 (7%)

Query: 226  SDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
            SD  V + I H Y  +G  + + K F     R+   W+S +  Y S  GE +E+++++  
Sbjct: 193  SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY-SDKGEPEEVIDIYKS 251

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            + G+GV      +++++  C  L    LG ++   +IK G +  + ++ +L++ +G   +
Sbjct: 252  MRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGN 311

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            V+ AN +F+++S+  D + WN I+    +N   E + ++F  M+    +  S T+  +L 
Sbjct: 312  VDYANYIFNQISE-RDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLS 370

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
                V     G+ IHG V+K   +S + VCN L+ MY+   + E A  VF  M       
Sbjct: 371  VLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP------ 424

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                                           D+I+WN L++     G   + L +L  M 
Sbjct: 425  -----------------------------TKDLISWNSLMASFVNDGRSLDALGILCSMI 455

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
              G   N  + +  L A         GR  HG ++ +GL  +  +G +L+ MY K   + 
Sbjct: 456  RTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMS 515

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
             ++ V   M  R++VAWN+LI GY        A      +  E +  + ++  S++S   
Sbjct: 516  TSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACL 575

Query: 645  IWGQSKEALVIIH------------HMKNSGIY--------------------PNVVTWT 672
            + G   E    +H            H+KNS I                      +++TW 
Sbjct: 576  VPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWN 635

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            ++++ +  + +  E LK   +M+   +  +  + S  L     L +L+ G+++H L +K 
Sbjct: 636  AILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 695

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF  D ++     DMYSK G +    ++   S N++L SWN +I     +G  +E    F
Sbjct: 696  GFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETF 755

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            HE+LE G +P  +TF +LL AC + GLV++G  Y+D ++ D+ + P IEH  C++DLLG+
Sbjct: 756  HEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGR 815

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            +G L EA  FI  MP KP+  +W +LL SC+IH  L+    A+  L KLEP + + + L 
Sbjct: 816  SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLS 875

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + RWEDVE +R  M    +K     SW+++   V  F      HP T EIY +L
Sbjct: 876  SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 935

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              +   +K+ GYV DT    QD DEE+K   L +H+E+LA+ Y LM T   + +R+ KN 
Sbjct: 936  EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 995

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+CSDCH+  K++S V GR I LRD  RFHHF  G CSC D W
Sbjct: 996  RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 139/613 (22%), Positives = 263/613 (42%), Gaps = 77/613 (12%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA  +K      V     L+N Y K   V+ A  LF ++  + +++ WN ++   +
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMP-VRNEVSWNTMMSGIV 135

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESNL 431
           R   +   ++ F++M     K  S  I  ++ AC + G+ F EG Q+HG+V KS L S++
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V   ++ +Y     +  + +VF+ M D N+ SW S++     +GY D            
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM-----VGYSD------------ 238

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                              G  + V+ + + M+  G   N +S+S+V+ +   L+    G
Sbjct: 239 ------------------KGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLG 280

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           R+  G ++++GL+  L V  SL+ M+     +  A  +F+ +  R+ ++WNS+++ Y   
Sbjct: 281 RQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQN 340

Query: 612 GLFVNAKKMLNQMEE--EEIKPDLVS-------------W-------------------- 636
           G    + ++ N M    +E+    VS             W                    
Sbjct: 341 GHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVC 400

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
           N+L+  Y+  G+S+EA ++   M       ++++W SL++  + +    ++L     M +
Sbjct: 401 NTLLRMYAGAGRSEEADLVFKQMPT----KDLISWNSLMASFVNDGRSLDALGILCSMIR 456

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
                N  T +S L  C        G+ +H L + +G   +  +   L+ MY K G + +
Sbjct: 457 TGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMST 516

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           +R V  +   + + +WN +I G+A   +  +A+  F  L   G   + IT  ++L+AC  
Sbjct: 517 SRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLV 576

Query: 817 SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            G + E  K   +              + ++ +  K G L  + D    +  +   T W 
Sbjct: 577 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIIT-WN 635

Query: 877 ALLGSCRIHGHLE 889
           A+L +   HGH E
Sbjct: 636 AILAANAHHGHGE 648


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/610 (36%), Positives = 363/610 (59%), Gaps = 10/610 (1%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            ++ +Y+  G   VA  +F++     ++ +++ +N ++  +  +  Y   L++ + M S  
Sbjct: 77   LMRAYSAQGETSVARYIFDR----SLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            F P+  +   VL+A + L  L+ G + H  I++ GLD +L++G +L+ MY K  CL+ A+
Sbjct: 133  FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREAR 192

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL--VSGYSI 645
            +V D M  R++V+WNS+++GY   G F +A ++  +M+   +  D  +  SL  V  Y+ 
Sbjct: 193  KVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYT- 251

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
               S E +  IH+M       N+++W  +I+  + N    E++  F+QM++  +KP++ T
Sbjct: 252  ---SLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVT 308

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
            ++SLL  CG L  L  G+ +H    K     +  +   L+DMY+K G L+ AR+VF K  
Sbjct: 309  IASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMR 368

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
             + + SW  M+  +   G G +A+ LF ++L++G  PD+I F ++L+AC ++GL+++G  
Sbjct: 369  LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            YF  M+  Y I+P IEH++CMVDL G+AG ++EA+ FI+ MP +P+  +WGALL +CR+H
Sbjct: 429  YFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 488

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
              ++   +A+  LF+L P  S  Y L+ N+ A +  W+DV  +R++M ++G+K V   S 
Sbjct: 489  SKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISN 548

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            ++++  VH F A    HP    IY EL  LV +MK+LGY+P T     D++ E+K   L 
Sbjct: 549  VELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLA 608

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+EKLAIV+ ++ TK   PIR+ KN RVC DCH A K +S +  R I +RD  RFHHF 
Sbjct: 609  IHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFS 668

Query: 1066 EGECSCNDCW 1075
             G CSC D W
Sbjct: 669  NGICSCGDYW 678



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 191/429 (44%), Gaps = 40/429 (9%)

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW-NEIIMVKLRNEKWE 378
           +I      D  L   LM  Y    +   A  +F     LE ++++ N +I   + N  + 
Sbjct: 62  VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDR--SLEKNVVFFNVMIRSYVNNNLYV 119

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A+ +F+ M   +      T   +L+AC+ +     G Q+H  ++K  L++NL + N L+
Sbjct: 120 EALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALV 179

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD-- 496
           +MY +   L  A +V D M   ++ SWNSM++ Y   G  D A  +  +M+S  +  D  
Sbjct: 180 AMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAG 239

Query: 497 -------------------------------IITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
                                          +I+WN +++ +  +      ++L   M+ 
Sbjct: 240 TMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEE 299

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            G +P+  +++ +L A  +L  L  GR  H YI +  L  +L +  +L+DMY K  CL+ 
Sbjct: 300 CGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEE 359

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           A++VFD M+ R++V+W S++S Y   G   +A  +  +M +    PD +++ S++S  S 
Sbjct: 360 ARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSH 419

Query: 646 WGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            G   +       M    GI P +  +  ++    +     E+  F  QM  E   PN  
Sbjct: 420 TGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPME---PNER 476

Query: 705 TMSSLLQTC 713
              +LL  C
Sbjct: 477 VWGALLSAC 485



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 21/255 (8%)

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
           D  +A  L+  YS  G    AR +F +S  K +  +N MI  +       EA+ +F  +L
Sbjct: 70  DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM---STDYNIIPTIEHYSCMVDLLGKA 853
              F PD  TF  +L AC     +  G +  D++     D N+       + +V + GK 
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG----NALVAMYGKC 185

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
           G L EA   +  MP++ D   W +++      G  + A    + +  L   + A     +
Sbjct: 186 GCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL 244

Query: 914 NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
           + +      E+V+ + +  + +  K+++ W     + ++ ++     P+ A         
Sbjct: 245 SPVVCYTSLENVQYIHNMFERMTKKNLISW-----NVMIAIYVNNSMPNEAVS------- 292

Query: 974 HLVSEMKKLGYVPDT 988
            L  +M++ G  PD 
Sbjct: 293 -LFLQMEECGMKPDA 306


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
            mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/692 (36%), Positives = 386/692 (55%), Gaps = 59/692 (8%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N LI+ YSR  ++E A  VFD M+D N+ SWNS+++ Y        A ++F+KM+    +
Sbjct: 102  NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----E 157

Query: 495  PDIITWNCLLSGHFTHG------------SYQNVLT---LLRGMQSLGFRPNGSSV---- 535
             + I+WN L+SG+  +G              +NV++   ++RG    G      ++    
Sbjct: 158  RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM 217

Query: 536  ---SVVLQAVTELRLLKYGRESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
               +VV   V    LL+ GR      L + + + D+   T+++  Y +   L  A+ +FD
Sbjct: 218  PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFD 277

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
             M  RN+V+W ++I+GY        A+K+   M E+    + VSW +++ GY+  G+  E
Sbjct: 278  EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLDE 333

Query: 652  ALVIIHHMK---------------NSGIYPNVV------------TWTSLISGSLQNENY 684
            A  + + M                 +G  P               TW+++I    +    
Sbjct: 334  ASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLE 393

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             ++L+ F  MQ+E I+PN  ++ S+L  C GL  L +G+EIH   +++ F  D YVA+ L
Sbjct: 394  LDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVL 453

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            + MY K GNL  A++VF + A K +  WN +I G+A +G G EA+ +FH++  +G  PD 
Sbjct: 454  LSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDD 513

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF  +L+AC  +G V++G + F+SM T Y +   IEHY+CMVDLLG+AG L+EA D I 
Sbjct: 514  VTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIE 573

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP + DA IWGALLG+CR H  L+ AE+A+++L  LEP N+  + L+ N+ A   RW+D
Sbjct: 574  KMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDD 633

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS-AEGAPHPATGEIYFELYHLVSEMKKLG 983
            V  LR +M +  V      SWI +++ VH F+  + + HP   EI   L  L   +++ G
Sbjct: 634  VAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAG 693

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            Y PD   V  D+DEEEK + L  H+EKLA+ YGL+K     PIRV+KN RVC DCH A K
Sbjct: 694  YYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIK 753

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             ++ V GREI LRD  RFHHF++G CSC D W
Sbjct: 754  LIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 138/299 (46%), Gaps = 11/299 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  + + G+   A + F     +    WS+ ++ YE  G E+ + LE++  +  +G+ 
Sbjct: 351 AMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLEL-DALELFRMMQREGIR 409

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  +L +C  L     G E+HA L++  FD DV++   L++ Y KC ++  A ++
Sbjct: 410 PNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQV 469

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F   + ++D ++WN II    ++     A+++F +M FS       T V +L AC+  G 
Sbjct: 470 FDRFA-VKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN 528

Query: 412 FHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G +I   +  K  +E  +    C++ +  R  KL  A  + + M  + +   W +++
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588

Query: 470 S---SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
               ++  L   +VA      +      P I+  N     + + G + +V  L R M+ 
Sbjct: 589 GACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNI----YASQGRWDDVAELRRNMRD 643


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Glycine max]
          Length = 986

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 275/859 (32%), Positives = 421/859 (49%), Gaps = 124/859 (14%)

Query: 301  LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
            LK C  L    L   +H   I +G  F  HL   L+  Y        A  L   +     
Sbjct: 168  LKECNSLAHAKL---LHQQSIMQGLLF--HLATNLIGTYIASNSTAYAILLLERLPPSPS 222

Query: 361  DLLW-NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
             + W N++I   L      +   L+R+M+         T   + +ACA + +   G  +H
Sbjct: 223  SVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLH 282

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD---HNLSSWNSMISSYTGLG 476
              V +S   SN+ VCN ++SMY +   L  A  +FD +      +L SWNS++S+Y    
Sbjct: 283  ATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWAS 342

Query: 477  YVDVAWSLFNKMNSSRI-QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
              + A +LF+KM +  +  PD+I             S  N+L            P  +S+
Sbjct: 343  DANTALALFHKMTTRHLMSPDVI-------------SLVNIL------------PACASL 377

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            +  L+          GR+ HG+ +R+GL  D++VG +++DMY K   ++ A +VF  MK 
Sbjct: 378  AASLR----------GRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKF 427

Query: 596  RNIVAWNSL-----------------------------------ISGYCFKGLFVNAKKM 620
            +++V+WN++                                   I+GY  +G    A  +
Sbjct: 428  KDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDV 487

Query: 621  LNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALVIIHHMKNSGIYP--------- 666
              QM +   +P++V+  SL+S     G  + G+      I   +   G  P         
Sbjct: 488  FRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVIN 547

Query: 667  ---------------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQED- 698
                                       +VVTWT +I G  Q+ +   +L+ F  M + D 
Sbjct: 548  GLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDK 607

Query: 699  -IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA-YVATGLIDMYSKSGNLKS 756
             IKPN  T+S  L  C  L  L+ G+++H   L+N +     +VA  LIDMYSKSG++ +
Sbjct: 608  SIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDT 667

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A+ VF     +   SW  ++ G+ ++G G++A+ +F E+ +    PD ITF  +L AC +
Sbjct: 668  AQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSH 727

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            SG+V+ G  +F+ MS D+ + P  EHY+CMVDL G+AG L EA   I  MP +P   +W 
Sbjct: 728  SGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWV 787

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            ALL +CR+H ++E  E A+ RL +LE  N  +Y L+ N+ A + RW+DV R+R++M   G
Sbjct: 788  ALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTG 847

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            +K     SWIQ  + V  F      HP + +IY  L  L+  +K +GYVP T     D+D
Sbjct: 848  IKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVD 907

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            +EEKG +L  H+EKLA+ YG++    RAPIR+ KN R+C DCH+A  Y+S +   EI LR
Sbjct: 908  DEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILR 967

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D +RFHHF+ G CSC   W
Sbjct: 968  DSSRFHHFKNGSCSCKGYW 986



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 178/699 (25%), Positives = 313/699 (44%), Gaps = 117/699 (16%)

Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAA 247
           LSC +     L E N    L+  K  H Q I  G +++   +  +LI  Y+      S A
Sbjct: 158 LSCATIPITALKECNS---LAHAKLLHQQSIMQGLLFH---LATNLIGTYIAS---NSTA 208

Query: 248 KAFFLY----FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKL 303
            A  L      S S   W + L       G  +++  ++ ++   G          + K 
Sbjct: 209 YAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKA 268

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV--SDLEDD 361
           C  L +  LG  +HA++ + GF  +V +  A+++ YGKC  +  A+ +F ++    ++D 
Sbjct: 269 CANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDL 328

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREM---QFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
           + WN ++   +       A+ LF +M      S   IS  +V +L ACA + A   G+Q+
Sbjct: 329 VSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVIS--LVNILPACASLAASLRGRQV 386

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           HG+ ++S L  ++ V N ++ MY++  K+E A +VF  MK  ++ SWN+M++ Y+  G +
Sbjct: 387 HGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRL 446

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
           + A SLF +M    I+ D++TW  +++G+   G     L + R M   G RPN  ++  +
Sbjct: 447 EHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSL 506

Query: 539 LQAVTELRLLKYGRESHGYILR-----NGLDY---DLYVGTSLMDMYVKNDCLQNAQEVF 590
           L A   +  L +G+E+H Y ++     +G D    DL V   L+DMY K    + A+++F
Sbjct: 507 LSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMF 566

Query: 591 DNM--KNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEIKPD-------------- 632
           D++  K+R++V W  +I GY   G   NA ++ + M   ++ IKP+              
Sbjct: 567 DSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARL 626

Query: 633 ----------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                                 L   N L+  YS  G    A ++  +M       N V+
Sbjct: 627 AALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQR----NAVS 682

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           WTSL++G   +    ++L+ F +M++  + P+  T   +L  C   G++ +G     +  
Sbjct: 683 WTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHG-----INF 737

Query: 731 KNGFIKDAYVATG------LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            N   KD  V  G      ++D++ ++G L                              
Sbjct: 738 FNRMSKDFGVDPGPEHYACMVDLWGRAGRL------------------------------ 767

Query: 785 GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
             EA+ L +E+     +P  + + ALL+AC+    VE G
Sbjct: 768 -GEAMKLINEM---PMEPTPVVWVALLSACRLHSNVELG 802


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 882

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 286/906 (31%), Positives = 473/906 (52%), Gaps = 80/906 (8%)

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF-LYFSRSYADWSSFL 265
            L+ ++  HA +I +G +  SD     LI  Y  F    S+   F  +  +++   W+S +
Sbjct: 20   LNELRRIHALVISLG-LDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSII 78

Query: 266  EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
              + S  G   + LE +G+L    V         ++K C  L    +G  V+  +++ GF
Sbjct: 79   RAF-SKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGF 137

Query: 326  DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
            + D+++  AL++ Y +   +  A ++F E+  + D + WN +I     +  +E A++++ 
Sbjct: 138  ESDLYVGNALVDMYSRMGLLSRARQVFDEMP-VRDLVSWNSLISGYSSHGYYEEALEIYH 196

Query: 386  EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            E++ S     S T+  +L A A +    +G+ +HG+ LKS + S   V N L++MY + +
Sbjct: 197  ELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFS 256

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            +   A RVFD M   +  ++N+MI  Y  L  V+ +  +F + N  + +PDI+T      
Sbjct: 257  RPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILT------ 309

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
                                         V+ VL A   LR L   +  + Y+LR G   
Sbjct: 310  -----------------------------VTSVLCACGHLRDLSLAKYIYNYMLRAGFVL 340

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK---MLN 622
            +  V   L+D+Y K   +  A++VF++M+ ++ V+WNS+ISGY   G  + A K   M+ 
Sbjct: 341  ESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400

Query: 623  QMEEEE--------------------------------IKPDLVSWNSLVSGYSIWGQSK 650
             MEE+                                 I  DL   N+L+  Y+  G+  
Sbjct: 401  IMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVG 460

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            ++L I + M       + VTW ++IS  ++  ++   L+   QM++  + P+  T    L
Sbjct: 461  DSLKIFNSMGT----LDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTL 516

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              C  L   + GKEIHC  L+ G+  +  +   LI+MYSK G L+S+  VF + + + + 
Sbjct: 517  PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVV 576

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +W  MI  + +YG G++A+  F ++ ++G  PD++ F AL+ AC +SGLVE+G   F+ M
Sbjct: 577  TWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKM 636

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
             T Y I P IEHY+C+VDLL ++  + +A +FI+ MP +PDA+IW ++L +CR  G +E 
Sbjct: 637  KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMET 696

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
            AE  SRR+ +L P +     L  N  A   +W+ V  +R S+ +  +K    +SWI+I +
Sbjct: 697  AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGK 756

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI-DEEEKGKVLLSHTE 1009
             VHVF +     P +  I+  L  L S M K GY+PD+R V Q++ +EEEK +++  H+E
Sbjct: 757  KVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSE 816

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            +LAI +GL+ T+   P++V+KN RVCSDCH   K +S + GREI +RD  RFH F++G C
Sbjct: 817  RLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGIC 876

Query: 1070 SCNDCW 1075
            SC D W
Sbjct: 877  SCKDRW 882


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
            mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/692 (36%), Positives = 386/692 (55%), Gaps = 59/692 (8%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N LI+ YSR  ++E A  VFD M+D N+ SWNS+++ Y        A ++F+KM+    +
Sbjct: 102  NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----E 157

Query: 495  PDIITWNCLLSGHFTHG------------SYQNVLT---LLRGMQSLGFRPNGSSV---- 535
             + I+WN L+SG+  +G              +NV++   ++RG    G      ++    
Sbjct: 158  RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM 217

Query: 536  ---SVVLQAVTELRLLKYGRESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
               +VV   V    LL+ GR      L + + + D+   T+++  Y +   L  A+ +FD
Sbjct: 218  PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFD 277

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
             M  RN+V+W ++I+GY        A+K+   M E+    + VSW +++ GY+  G+  E
Sbjct: 278  EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLDE 333

Query: 652  ALVIIHHMK---------------NSGIYPNVV------------TWTSLISGSLQNENY 684
            A  + + M                 +G  P               TW+++I    +    
Sbjct: 334  ASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLE 393

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             ++L+ F  MQ+E I+PN  ++ S+L  C GL  L +G+EIH   +++ F  D YVA+ L
Sbjct: 394  LDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVL 453

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            + MY K GNL  A++VF + A K +  WN +I G+A +G G EA+ +FH++  +G  PD 
Sbjct: 454  LSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDD 513

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF  +L+AC  +G V++G + F+SM T Y +   IEHY+CMVDLLG+AG L+EA D I 
Sbjct: 514  VTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIE 573

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP + DA IWGALLG+CR H  L+ AE+A+++L  LEP N+  + L+ N+ A   RW+D
Sbjct: 574  KMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDD 633

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS-AEGAPHPATGEIYFELYHLVSEMKKLG 983
            V  LR +M +  V      SWI +++ VH F+  + + HP   EI   L  L   +++ G
Sbjct: 634  VAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAG 693

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            Y PD   V  D+DEEEK + L  H+EKLA+ YGL+K     PIRV+KN RVC DCH A K
Sbjct: 694  YYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIK 753

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             ++ V GREI LRD  RFHHF++G CSC D W
Sbjct: 754  LIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 138/299 (46%), Gaps = 11/299 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  + + G+   A + F     +    WS+ ++ YE  G E+ + LE++  +  +G+ 
Sbjct: 351 AMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLEL-DALELFRMMQREGIR 409

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  +L +C  L     G E+HA L++  FD DV++   L++ Y KC ++  A ++
Sbjct: 410 PNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQV 469

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F   + ++D ++WN II    ++     A+++F +M FS       T V +L AC+  G 
Sbjct: 470 FDRFA-VKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN 528

Query: 412 FHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G +I   +  K  +E  +    C++ +  R  KL  A  + + M  + +   W +++
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588

Query: 470 S---SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
               ++  L   +VA      +      P I+  N     + + G + +V  L R M+ 
Sbjct: 589 GACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNI----YASQGRWDDVAELRRNMRD 643


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/741 (33%), Positives = 387/741 (52%), Gaps = 75/741 (10%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L+ C +     + K++H  +LK+  +    + N LI+ Y +   L  A  VFD +   N
Sbjct: 11   LLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPN 70

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            L SWN+++S Y+ LG +     +FN M       D ++WN  +SG+  +GS  + + + +
Sbjct: 71   LFSWNTILSVYSKLGLLSQMQQIFNLMPFR----DGVSWNLAISGYANYGSCSDAVRVYK 126

Query: 522  GM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M +      N  + S +L   ++ R +  GR+ +G IL+ G   D++VG+ L+DMY K 
Sbjct: 127  LMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKL 186

Query: 581  DCLQNAQEVFDNMKNRNIV-------------------------------AWNSLISGYC 609
              + +A+  FD M  RN+V                               +W  +I+G  
Sbjct: 187  GLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLM 246

Query: 610  FKGLFVNAKKMLNQM--------------------------EEEEI---------KPDLV 634
              GL   A  M  +M                          E ++I         K ++ 
Sbjct: 247  QNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVF 306

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
              ++LV  YS     K A  +   M       NV++WT+++ G  QN    E++K F +M
Sbjct: 307  VGSALVDMYSKCRSIKSAETVFKRMPQK----NVISWTAMLVGYGQNGFSEEAVKIFFEM 362

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
            Q+  ++P+  T+ S++ +C  L  L+ G + HC  L +G I    V+  LI +Y K G+ 
Sbjct: 363  QRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGST 422

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            +++  +F +   +   SW  ++ G+A +G   E I LF  +L  G +PD +TF  +L+AC
Sbjct: 423  ENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSAC 482

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
              +GLVE+G +YF+SM  ++ I+P ++H +C++DLLG+AG L+EA +FI  MP  PD   
Sbjct: 483  SRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVG 542

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            W  LL SCR+HG +E  + A+  L  LEP N A+Y L+ +L A   +W+ V +LR  M +
Sbjct: 543  WATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRD 602

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
              V+    +SWI+    VHVFSA+    P  G+IY EL  L  +M + GYVPD   V  D
Sbjct: 603  KRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHD 662

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
            ++E EK K+L  H+EKLAI +GL+      PIRVIKN RVC DCH A K++S +  REI 
Sbjct: 663  VEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREIL 722

Query: 1055 LRDGARFHHFREGECSCNDCW 1075
            +RD  RFH F++G CSC D W
Sbjct: 723  VRDAVRFHLFKDGTCSCGDFW 743



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 219/520 (42%), Gaps = 73/520 (14%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G  +   + F L   R    W+  +  Y ++G    + + V+  +     +  +RI
Sbjct: 81  YSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYG-SCSDAVRVYKLMLKDAAMNLNRI 139

Query: 297 -LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK-------------- 341
             + +L LC+K     LG +++  ++K GF  DV +   L++ Y K              
Sbjct: 140 TFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEM 199

Query: 342 -----------------CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
                            C  +E + +LF  + +  D + W  +I   ++N     A+ +F
Sbjct: 200 PERNVVMCNTMITGLMRCGMIEESQRLFCGLKE-RDSISWTIMITGLMQNGLEREALDMF 258

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           REM+ +       T   +L AC  + A  EGKQIH YV+++  + N+ V + L+ MYS+ 
Sbjct: 259 REMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKC 318

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             ++ A  VF  M   N+ SW +M+  Y   G+ + A  +F +M  + ++PD        
Sbjct: 319 RSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPD-------- 370

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
              FT GS                         V+ +   L  L+ G + H   L +GL 
Sbjct: 371 --DFTLGS-------------------------VISSCANLASLEEGAQFHCRALVSGLI 403

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
             + V  +L+ +Y K    +N+  +F  M  R+ V+W +L++GY   G       +  +M
Sbjct: 404 SFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERM 463

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNEN 683
               +KPD V++  ++S  S  G  ++ L     M K  GI P V   T +I    +   
Sbjct: 464 LAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGR 523

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             E+  F   M      P+    ++LL +C   G ++ GK
Sbjct: 524 LEEARNFINNMP---CHPDVVGWATLLSSCRVHGDMEIGK 560



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 2/278 (0%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           M  ++I   +  G    + + F     R    W+  +      G E +E L+++ E+   
Sbjct: 206 MCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLE-REALDMFREMRLA 264

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G          +L  C  L+A   G ++HA +I+     +V +  AL++ Y KCR ++SA
Sbjct: 265 GFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSA 324

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F  +   ++ + W  +++   +N   E A+K+F EMQ +  +    T+  ++ +CA 
Sbjct: 325 ETVFKRMPQ-KNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCAN 383

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + +  EG Q H   L S L S ++V N LI++Y +    E + R+F  M   +  SW ++
Sbjct: 384 LASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTAL 443

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ Y   G  +    LF +M +  ++PD +T+  +LS 
Sbjct: 444 LAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSA 481



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 33/198 (16%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +S   +SLL+ C         K++HCL LK     + +++  LI  Y K GNL  A  VF
Sbjct: 4   SSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVF 63

Query: 762 RKSANKTLASWNCM-------------------------------IMGFAIYGNGKEAIL 790
                  L SWN +                               I G+A YG+  +A+ 
Sbjct: 64  DHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVR 123

Query: 791 LFHELL-ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
           ++  +L +     + ITF+ +L  C     V+ G +  +     +     +   S +VD+
Sbjct: 124 VYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLG-RQINGQILKFGFGSDVFVGSPLVDM 182

Query: 850 LGKAGYLDEAWDFIRTMP 867
             K G + +A  +   MP
Sbjct: 183 YTKLGLIYDAKRYFDEMP 200


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/797 (32%), Positives = 420/797 (52%), Gaps = 69/797 (8%)

Query: 312  LGVEVHASLIKRG-FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
            LG  +H  L++    D D  +  +L+  Y KC  VE+A ++F ++  + D + W  +   
Sbjct: 58   LGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASC 117

Query: 371  KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH-EGKQIHGYVLKSAL-E 428
              RN     +++L  EM     +  + T+    +AC     F   G  + G+VLK+    
Sbjct: 118  LARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWG 177

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            +++SV   LI M++RN  L  A RVFD +                               
Sbjct: 178  TDVSVGCALIDMFARNGDLVAAQRVFDGL------------------------------- 206

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                I+   + W  L++ +   G    V+ L   M   GF P+G S+S ++ A TEL  +
Sbjct: 207  ----IERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSV 262

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDNMKNRNIVAWNSLI 605
            + G++ H   LR GL  D  V   L+DMY K      +++A++VF  M   N+++W +LI
Sbjct: 263  RLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALI 322

Query: 606  SGYCFKGLFVN-AKKMLNQMEEEEIKPDLVSWNSLVSGYS-IWGQSKEALVIIHHMKNSG 663
            SGY   G+  N    +  +M  E I+P+ +++++L+   + +  Q     +  H +K S 
Sbjct: 323  SGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSI 382

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI----------KPNST--------- 704
             + NVV   +L+S   ++    E+ K F Q+ + +I          + N++         
Sbjct: 383  AHVNVVG-NALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMD 441

Query: 705  ------TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
                  T +SLL     +GLL  G+++H L +K GF  D  ++  L+ MY++ G L+ A 
Sbjct: 442  DGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDAC 501

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
              F +  +  + SW  +I G A +G  K+A+ +FH+++  G +P+ +T+ A+L+AC + G
Sbjct: 502  RAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVG 561

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            LV+EG ++F SM  D+ ++P +EHY+C+VDLL ++G ++EA  FI  MP K DA +W  L
Sbjct: 562  LVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTL 621

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            L +CR +G+ E  EIA+  +  LEP + A Y L+ NL A +  W++V R+R  M +  + 
Sbjct: 622  LSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLS 681

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                 SW+ +   +H F A    HP   +IY +L  L+ E+K +GYVPDT  V  D+ EE
Sbjct: 682  KETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEE 741

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
             K + LL H+EK+A+ +GL+ T +  P+R+ KN RVC+DCH+A KY+S   GREI LRD 
Sbjct: 742  LKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDS 801

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFH  ++G CSC + W
Sbjct: 802  NRFHRMKDGICSCGEYW 818



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 153/638 (23%), Positives = 275/638 (43%), Gaps = 78/638 (12%)

Query: 190 CISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAK 248
           C ++  CF  E   FR    V      ++K G  W +D  V  +LI  +   GD  +A +
Sbjct: 147 CAAARACFPQEL--FRLAGGVVLGF--VLKTG-FWGTDVSVGCALIDMFARNGDLVAAQR 201

Query: 249 AFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLM 308
            F     R+   W+  +  Y    G   +++E++  +   G       ++ ++  CT+L 
Sbjct: 202 VFDGLIERTSVVWTLLITRYVQ-AGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELG 260

Query: 309 AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC---RDVESANKLFSEVSDLEDDLLWN 365
           +  LG ++H+  ++ G   D  + C L++ Y K    R +E A K+F  +    + + W 
Sbjct: 261 SVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPR-HNVMSWT 319

Query: 366 EIIMVKLRNEKWE-NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            +I   +++   E N + LFREM   S +    T   +L+ACA +     G+QIH +VLK
Sbjct: 320 ALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLK 379

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           +++     V N L+SMY+ +  +E A + FD + + N+ S +            DV    
Sbjct: 380 TSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSP-----------DVETER 428

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
            N   SS+I+                        +  G+ +  F       + +L A   
Sbjct: 429 NNASCSSKIEG-----------------------MDDGVSTFTF-------ASLLSAAAS 458

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
           + LL  G++ H   ++ G   D  +  SL+ MY +   L++A   FD MK+ N+++W S+
Sbjct: 459 VGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSI 518

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSG 663
           ISG    G    A  M + M    +KP+ V++ +++S  S  G  KE       M K+ G
Sbjct: 519 ISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHG 578

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           + P +  +  ++    ++    E+ +F  +M     K ++    +LL  C   G  + G 
Sbjct: 579 LLPRMEHYACIVDLLARSGLVEEARQFINEMP---CKADALVWKTLLSACRTYGNTEIG- 634

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKS--ANKTLASWNCMIMG 778
           EI    + N   +D      L ++Y+ +G    +   R + R    + +T  SW  M +G
Sbjct: 635 EIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSW--MDVG 692

Query: 779 FAIY----GNGKEA---------ILLFHELLETGFQPD 803
             I+    G+             + L  E+ + G+ PD
Sbjct: 693 NTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPD 730


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/763 (33%), Positives = 397/763 (52%), Gaps = 58/763 (7%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D+  +  L+  Y    D++ + K+FS+    + D + +N +I     N     AI+LF +
Sbjct: 78   DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            MQ  + +  + T   +L A A V    +  +Q+H  V+KS      SV N LIS Y +  
Sbjct: 138  MQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCA 197

Query: 446  K---------LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
                      +  A ++FD M + +  SW ++I+ Y     +D A    N   S ++   
Sbjct: 198  ASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNG-TSKKLG-- 254

Query: 497  IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
             + WN ++SG+   G Y     + R M     + +  + + V+         + G+E H 
Sbjct: 255  -VAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHA 313

Query: 557  YILRN----GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            Y L+       D  + V  +L+  Y K   +  AQE+F+ M  R++V+WN ++SGY    
Sbjct: 314  YFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVR 373

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                AK   N+M E+ I    +SW  ++SG +  G ++EAL                   
Sbjct: 374  CMDEAKSFFNEMPEKNI----LSWIIMISGLAQIGFAEEAL------------------- 410

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
                            KFF +M+ +  +P     +  + +C  LG L++G+++H   ++ 
Sbjct: 411  ----------------KFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRY 454

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G+         LI MY++ G + +A  +F         SWN MI     +G G +AI LF
Sbjct: 455  GYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELF 514

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             E+L+ G  PD I+F  +++AC ++GLV+EG KYFDSM   Y + P  EHY+ ++DLL +
Sbjct: 515  EEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCR 574

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG   EA + + +MPF+P A IW ALL  CRIHG+++    A+ RLF+L+P +   Y L+
Sbjct: 575  AGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLL 634

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A++ +W D+ ++R  M + GVK     SWI+++  VH F    A HP   +IY  L
Sbjct: 635  SNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYL 694

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              LV EM+K+GYVPDT+CV  D++ + K   L +H+EKLA+ YG MK    A +RV KN 
Sbjct: 695  EQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNL 754

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH A K+MS V GREI +RDG RFHHFR+G+CSC D W
Sbjct: 755  RICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/490 (22%), Positives = 222/490 (45%), Gaps = 32/490 (6%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            + +H +++ S  +    + N LI +YS+++KL  A  +FD +   ++ +  ++I++Y+ 
Sbjct: 32  ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            G + ++  +F+  ++     D + +N +++ +  +      + L   MQ   FRP+  +
Sbjct: 92  AGDLKLSRKIFS--DTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYT 149

Query: 535 VSVVLQAVTEL-RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---------NDCLQ 584
            + VL A+  +    K+ ++ H  ++++G  +   V  +L+  YVK         +  + 
Sbjct: 150 FTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMA 209

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            A+++FD M NR+ ++W ++I+GY        AK+ LN       K   V+WN+++SGY+
Sbjct: 210 EARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTS----KKLGVAWNAMISGYA 265

Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG-------SLQNENYRESLKFFIQMQQE 697
             G   EA  +   M  S I  +  T+TS+IS         L  E +   LK       +
Sbjct: 266 HRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPD 325

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
              P +  + +    CG + + Q   EI     +   +    + +G +++      +  A
Sbjct: 326 VAMPVNNALITFYWKCGKVDIAQ---EIFNKMPERDLVSWNIILSGYVNVRC----MDEA 378

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
           +  F +   K + SW  MI G A  G  +EA+  F+ +   GF+P    F   + +C   
Sbjct: 379 KSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVL 438

Query: 818 GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
           G ++ G +   +    Y    ++   + ++ +  + G +D A      MP   DA  W A
Sbjct: 439 GSLKHG-RQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCV-DAISWNA 496

Query: 878 LLGSCRIHGH 887
           ++ +   HG 
Sbjct: 497 MIAALGQHGQ 506



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/231 (20%), Positives = 105/231 (45%), Gaps = 10/231 (4%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C+ L +   G ++HA +++ G++  +    AL+  Y +C  V++A+ LF  +  + D + 
Sbjct: 435 CSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCV-DAIS 493

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ----IH 419
           WN +I    ++ +   AI+LF EM          + + ++ AC+  G   EG++    +H
Sbjct: 494 WNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMH 553

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYV 478
                +  E + +    +I +  R  K   A  V +SM  +     W ++++     G +
Sbjct: 554 NVYGVNPDEEHYAR---IIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNI 610

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           D+      ++   + Q D  T+  L + +   G + ++  + + M+  G +
Sbjct: 611 DLGIEAAERLFELKPQHD-GTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVK 660


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/775 (33%), Positives = 392/775 (50%), Gaps = 96/775 (12%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            ++H+ +I  G    V     L+  Y   RD  S+  +F   S   +  LWN II     N
Sbjct: 34   KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              +  A+ L+ E Q    +  + T   ++ ACA +  F   K IH  VL     S+L + 
Sbjct: 94   GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N LI MY R N L+ A +VF+ M                                     
Sbjct: 154  NALIDMYCRFNDLDKARKVFEEMP-----------------------------------L 178

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL------GFRPNGSSVSVVLQAVTELRLL 548
             D+++WN L+SG+  +G +   L +      L       F+P+  +++ +LQA   L  L
Sbjct: 179  RDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDL 238

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
            ++G+  H Y++ +G + D      L++MY K   L  +QEVF  MK +            
Sbjct: 239  EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK------------ 286

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
                                   D VSWNS+++ Y   G+  ++L +  +MK      ++
Sbjct: 287  -----------------------DSVSWNSMINVYIQNGKMGDSLKVFENMKAR----DI 319

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            +TW ++I+  + +E+    L+   +M+ E + P+  TM S+L  C  L   + GKEIH  
Sbjct: 320  ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 379

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
              K G   D  V   LI+MYSK G+L+++ +VF+    K + +W  +I    +YG GK+A
Sbjct: 380  IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKA 439

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +  F E+   G  PD + F A++ AC +SGLVEEG  YF  M  DY I P IEHY+C+VD
Sbjct: 440  VRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVD 499

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LL ++  LD+A DFI +MP KPD++IWGALL +CR+ G  E AE  S R+ +L P ++  
Sbjct: 500  LLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGY 559

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y L+ N+ A   +W+ V  +R S+   G+K     SW++I   V+VF         TG  
Sbjct: 560  YVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVF--------GTGTK 611

Query: 969  YFELYHLVSE--------MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
            +FE +  V++        M K GY+ + + V  DIDE+EK  +L  H+E+LAI +GL+ T
Sbjct: 612  FFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNT 671

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K   P++V+KN RVC DCHT  KY+S +  RE+ +RD  RFH F++G CSC D W
Sbjct: 672  KPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 254/542 (46%), Gaps = 30/542 (5%)

Query: 183 AKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGD 242
           ++Q   S IS        T +   L      H+ +I +G + +S      LI  Y  F D
Sbjct: 11  SRQTLFSSISRALASAATTTQLHKL------HSLIITLG-LHHSVIFSAKLIAKYAHFRD 63

Query: 243 FTSAAKAFFLYF-SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIIL 301
            TS+   F L   S +   W+S +    +  G   E L ++ E     +   +     ++
Sbjct: 64  PTSSFSVFRLASPSNNVYLWNSIIRAL-THNGLFSEALSLYSETQRIRLQPDTYTFPSVI 122

Query: 302 KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
             C  L+ F +   +H  ++  GF  D+++  AL++ Y +  D++ A K+F E+  L D 
Sbjct: 123 NACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP-LRDV 181

Query: 362 LLWNEIIMVKLRNEKWENA-------IKLFREM--QFSSAKAISRTIVKMLQACAKVGAF 412
           + WN +I     N  W  A       IKLF EM  QF   K    TI  +LQAC  +G  
Sbjct: 182 VSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQF---KPDLLTITSILQACGHLGDL 238

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             GK +H Y++ S  E + +  N LI+MY++   L  +  VF  MK  +  SWNSMI+ Y
Sbjct: 239 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 298

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              G +  +  +F  M +     DIITWN +++           L ++  M++ G  P+ 
Sbjct: 299 IQNGKMGDSLKVFENMKAR----DIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM 354

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
           +++  +L   + L   + G+E HG I + GL+ D+ VG  L++MY K   L+N+ +VF  
Sbjct: 355 ATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKL 414

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           MK +++V W +LIS     G    A +   +ME   I PD V++ +++   S  G  +E 
Sbjct: 415 MKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEG 474

Query: 653 LVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           L   H MK    I P +  +  ++    ++    ++  F + M    +KP+S+   +LL 
Sbjct: 475 LNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMP---LKPDSSIWGALLS 531

Query: 712 TC 713
            C
Sbjct: 532 AC 533


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/808 (31%), Positives = 420/808 (51%), Gaps = 65/808 (8%)

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            L+ +  +C   +   LG +VH   +K G    V +  +L++ Y K  +V    ++F E+ 
Sbjct: 96   LSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMG 155

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            +  + + W  ++     N  +    +LF +MQ+        T+  ++ A    G    G 
Sbjct: 156  E-RNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGL 214

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            Q+H  V+K   E  + V                               +NS+IS Y+ LG
Sbjct: 215  QVHAMVVKHGFEEAIPV-------------------------------FNSLISLYSRLG 243

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             +  A  +F+KM       D +TWN +++G+  +G    V  +   MQ  G +P   + +
Sbjct: 244  MLRDARDVFDKMEIR----DWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFA 299

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN- 595
             V+++   LR L   +      L++G   D  V T+LM    K   + +A  +F  M+  
Sbjct: 300  SVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEG 359

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-GYSIWGQSKEALV 654
            +N+V+W ++ISG    G    A  + +QM  E +KP+  +++++++  Y ++     A V
Sbjct: 360  KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEV 419

Query: 655  I-IHHMKNSGI-------------------------YPNVVTWTSLISGSLQNENYRESL 688
            I  ++ ++S +                           +++ W+++++G  Q     E+ 
Sbjct: 420  IKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAA 479

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGG-LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            K F Q+ +E IKPN  T SS++  C       + GK+ H   +K        V++ L+ M
Sbjct: 480  KLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTM 539

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y+K GN+ SA EVF++   + L SWN MI G++ +G  K+A+ +F E+ +     DA+TF
Sbjct: 540  YAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTF 599

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
              ++ AC ++GLVE+G KYF+SM  D++I PT++HYSCM+DL  +AG L++A   I  MP
Sbjct: 600  IGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMP 659

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
            F P AT+W  LLG+ R+H ++E  E+A+ +L  L+P +SA Y L+ N+ A +  W++   
Sbjct: 660  FPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTN 719

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            +R  MD+  VK    +SWI++    + F A    HP + +IY +L  L   +K  GY PD
Sbjct: 720  VRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPD 779

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSL 1047
            T+ V+ DI++E+K  +L  H+E+LAI +GL+ T    PI+++KN RVC DCH   K +SL
Sbjct: 780  TKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSL 839

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            V  R I +RD  RFHHF++G CSC D W
Sbjct: 840  VEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 259/562 (46%), Gaps = 78/562 (13%)

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N+++    R+++ + A+ LF  +  SS +    T+  +   CA       G+Q+H   +K
Sbjct: 62  NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
             L  ++SV   L+ MY +   +    RVFD M + N                       
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN----------------------- 158

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
                       +++W  LL+G+  +G Y  V  L   MQ  G  PN  +VS V+ A+  
Sbjct: 159 ------------VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVN 206

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             ++  G + H  ++++G +  + V  SL+ +Y +   L++A++VFD M+ R+ V WNS+
Sbjct: 207 EGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSM 266

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---------------------SGY 643
           I+GY   G  +   ++ N+M+   +KP  +++ S++                     SG+
Sbjct: 267 IAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGF 326

Query: 644 --------------SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                         S   +  +AL +   M+      NVV+WT++ISG LQN    +++ 
Sbjct: 327 TTDQIVITALMVALSKCKEMDDALSLFSLMEEG---KNVVSWTAMISGCLQNGGNDQAVN 383

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            F QM++E +KPN  T S++L     + +     E+H   +K  + + + V T L+D Y 
Sbjct: 384 LFSQMRREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYV 439

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           K GN   A +VF     K L +W+ M+ G+A  G  +EA  LFH+L++ G +P+  TF++
Sbjct: 440 KLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSS 499

Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           ++ AC +     E  K F + +    +   +   S +V +  K G +D A +  +    +
Sbjct: 500 VINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKER 559

Query: 870 PDATIWGALLGSCRIHGHLEYA 891
            D   W +++     HG  + A
Sbjct: 560 -DLVSWNSMISGYSQHGQAKKA 580



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/639 (20%), Positives = 289/639 (45%), Gaps = 89/639 (13%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H Q +K G + +   +  SL+  Y++  +     + F     R+   W+S L  Y S+ G
Sbjct: 116 HCQCVKFGLV-DHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGY-SWNG 173

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
               + E++ ++  +GV+     ++ ++          +G++VHA ++K GF+  + +  
Sbjct: 174 LYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFN 233

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +L++ Y +   +  A  +F ++ ++ D + WN +I   +RN +     ++F +MQ +  K
Sbjct: 234 SLISLYSRLGMLRDARDVFDKM-EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVK 292

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T   ++++CA +      K +    LKS   ++  V   L+   S+  +++ A  +
Sbjct: 293 PTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSL 352

Query: 454 FDSMKD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           F  M++  N+ SW +MIS     G  D A +LF++M    ++P+  T++ +L+ H+    
Sbjct: 353 FSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYP--- 409

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                                +  E H  +++   +    VGT+
Sbjct: 410 ------------------------------------VFVSEMHAEVIKTNYERSSSVGTA 433

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+D YVK     +A +VF+ ++ ++++AW+++++GY   G    A K+ +Q+ +E IKP+
Sbjct: 434 LLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPN 493

Query: 633 LVSWNSLVS----------------GYSIWGQSKEALVI----------------IHHMK 660
             +++S+++                 Y+I  +   AL +                 H + 
Sbjct: 494 EFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVF 553

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                 ++V+W S+ISG  Q+   +++L+ F +MQ+ ++  ++ T   ++  C   GL++
Sbjct: 554 KRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVE 613

Query: 721 NGKEIHCLCLKNGFIKDAYVA------TGLIDMYSKSGNLKSAREVFRKSANKTLAS-WN 773
            G++       N  I D ++       + +ID+YS++G L+ A  +  +      A+ W 
Sbjct: 614 KGQKYF-----NSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWR 668

Query: 774 CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            ++    ++ N +   L   +L+    QP+      LL+
Sbjct: 669 TLLGAARVHRNVELGELAAEKLI--SLQPEDSAAYVLLS 705



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 4/226 (1%)

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
           +++  +E+L  F+ +    ++P+ +T+S +   C G    + G+++HC C+K G +    
Sbjct: 70  RDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVS 129

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
           V T L+DMY K+ N+   R VF +   + + SW  ++ G++  G       LF ++   G
Sbjct: 130 VGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEG 189

Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             P+  T + ++AA  N G+V  G +   +M   +     I  ++ ++ L  + G L +A
Sbjct: 190 VLPNRYTVSTVIAALVNEGVVGIGLQ-VHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDA 248

Query: 860 WDFIRTMPFKPDATIWGALL-GSCRIHGHLEYAEIASR-RLFKLEP 903
            D    M  + D   W +++ G  R    LE  EI ++ +L  ++P
Sbjct: 249 RDVFDKMEIR-DWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKP 293


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 271/877 (30%), Positives = 456/877 (51%), Gaps = 74/877 (8%)

Query: 233  LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL-HGKGVI 291
            LI  Y + G F S+ + F  +       W   ++ Y  +GG  +E + ++ E+ +     
Sbjct: 39   LIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCY-VWGGFFEEAVSLYHEMVYQDQTQ 97

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
              + +   +LK C+      +G +VH  +IK GF+ D  ++ +L+  YG+   ++ A K 
Sbjct: 98   ISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKA 157

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F  +  + D + W+ I++  ++N +    + +F +M   + +  S T++ + +AC+++G+
Sbjct: 158  FDTMP-IRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGS 216

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               G+ +HGYV++  +ESN S+ N LI MY +   L  A R+F+++     + W  MIS 
Sbjct: 217  LRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISC 276

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            Y                N S                   G +Q  L +   MQ     PN
Sbjct: 277  Y----------------NQS-------------------GCFQEALNVFAKMQEFKMEPN 301

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL-YVGTSLMDMYVKNDCLQNAQEVF 590
              ++  VL A   L  +K GR  HG+++R  +D +L ++G +LM++Y     L++  +VF
Sbjct: 302  QVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVF 361

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL------------VSWNS 638
            + +K + I++WN+LIS +   G    A  +  QM+ + + PD             +S++ 
Sbjct: 362  ETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQ 421

Query: 639  L---VSGYSIWGQS-----KEALVIIH------HMKNSGIYP----NVVTWTSLISGSLQ 680
            L   + GY I   +     + AL+ ++      H  N         ++VTW S+I G  Q
Sbjct: 422  LGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQ 481

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            N    E++  F QM    +K +  T  S++Q C  LG L+ GK +H   +  G  KD+Y+
Sbjct: 482  NGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYL 541

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             T L DMYSK G L+ A  VF + + +++ SW+ MI G+ ++G     I LF+++L +G 
Sbjct: 542  DTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGI 601

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ ITF  +L+AC ++G VEEG  YF+SMS ++ + P  +H++CMVDLL +AG L+ A+
Sbjct: 602  KPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAY 660

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
              I ++PF  +++IWGALL  CRIH  ++  +   + L  ++  ++  Y L+ N+ A   
Sbjct: 661  QIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEG 720

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
             W+   ++R  M   G++ V  +S I+ID+ ++ F      H  T +IY  L +  S + 
Sbjct: 721  TWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVH 780

Query: 981  KLGY--VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
               Y   PD   V      +E    ++SH+EKLAI +G++ T+    +R+ KN RVC DC
Sbjct: 781  AQVYDSEPDNSIVGTSKFNKENN--VVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDC 838

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H+ AK  S + GREI +RD  RFH FR G CSCND W
Sbjct: 839  HSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 153/629 (24%), Positives = 284/629 (45%), Gaps = 81/629 (12%)

Query: 193 SGFCF---LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAK 248
           S F F   L   + F  LS     H ++IK G  + SD +V+ SL+  Y E      A K
Sbjct: 99  SNFVFPSVLKACSGFGDLSVGGKVHGRVIKCG--FESDAVVETSLLCMYGEMSCLDDACK 156

Query: 249 AFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLM 308
           AF     R    WSS + ++    G+  E L+++ ++  + V   S  +  + + C++L 
Sbjct: 157 AFDTMPIRDVVAWSSIVLNFVQ-NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELG 215

Query: 309 AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
           +  LG  VH  +++R  + +  L  +L+  YGK  D+ SA +LF  V        W  +I
Sbjct: 216 SLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVP-CRMTAPWTPMI 274

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
               ++  ++ A+ +F +MQ    +    T+V +L ACA++G   EG+ +HG+V++ A++
Sbjct: 275 SCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMD 334

Query: 429 SNLSVCN-CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             L      L+ +Y+    L    +VF+++K+  + SWN++IS +T  G  + A  LF +
Sbjct: 335 PELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQ 394

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M                                   Q+ G  P+  S++  L A   +  
Sbjct: 395 M-----------------------------------QTQGLMPDSYSLASSLSACGTISF 419

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            + G + HGYI++ G +++ +V  +L+DMY K   + +A ++F+ +K +++V WNS+I G
Sbjct: 420 SQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICG 478

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
           +   G  V A  + +QM    +K D +++ S++   S  G  ++   + H +   G+  +
Sbjct: 479 FSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKD 538

Query: 668 -------------------------------VVTWTSLISGSLQNENYRESLKFFIQMQQ 696
                                          +V+W+ +I+G   +     ++  F QM  
Sbjct: 539 SYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLG 598

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
             IKPN  T   +L  C   G ++ GK       + G          ++D+ S++G+L  
Sbjct: 599 SGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNG 658

Query: 757 AREVFRK---SANKTLASWNCMIMGFAIY 782
           A ++       AN ++  W  ++ G  I+
Sbjct: 659 AYQIITSLPFPANSSI--WGALLNGCRIH 685



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 32/301 (10%)

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H ++   GL       T L++ Y +    ++++ VFD     +   W  LI  Y + G F
Sbjct: 21  HAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFF 80

Query: 615 VNAKKMLNQMEEEE-------IKPDLVSWNSLVSGYSIWGQ----------SKEALV--- 654
             A  + ++M  ++       + P ++   S     S+ G+            +A+V   
Sbjct: 81  EEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETS 140

Query: 655 ----------IIHHMKNSGIYP--NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                     +    K     P  +VV W+S++   +QN    E L  F QM  E ++P+
Sbjct: 141 LLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPD 200

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
           S TM S+ + C  LG L+ G+ +H   ++     +A +   LI MY K G+L SA  +F 
Sbjct: 201 SVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFE 260

Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
               +  A W  MI  +   G  +EA+ +F ++ E   +P+ +T   +L AC   G V+E
Sbjct: 261 NVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKE 320

Query: 823 G 823
           G
Sbjct: 321 G 321



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 5/158 (3%)

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           ++H      G  +    +T LI+ Y++ G  +S++ VF          W  +I  +   G
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78

Query: 784 NGKEAILLFHELL-ETGFQPDAITFTALLAACKNSGLVEEGWKYFDS-MSTDYNIIPTIE 841
             +EA+ L+HE++ +   Q     F ++L AC   G +  G K     +   +     +E
Sbjct: 79  FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
             + ++ + G+   LD+A     TMP + D   W +++
Sbjct: 139 --TSLLCMYGEMSCLDDACKAFDTMPIR-DVVAWSSIV 173


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 280/906 (30%), Positives = 470/906 (51%), Gaps = 80/906 (8%)

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF-LYFSRSYADWSSFL 265
            L+ ++  HA +I +G + +SD     LI  Y  F +  S+   F  +  +++   W+S +
Sbjct: 20   LNELRRIHALVISLG-LDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78

Query: 266  EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
              + S  G   E LE +G+L    V         ++K C  L    +G  V+  ++  GF
Sbjct: 79   RAF-SKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF 137

Query: 326  DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
            + D+ +  AL++ Y +   +  A ++F E+  + D + WN +I     +  +E A++++ 
Sbjct: 138  ESDLFVGNALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLISGYSSHGYYEEALEIYH 196

Query: 386  EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            E++ S     S T+  +L A   +    +G+ +HG+ LKS + S + V N L++MY +  
Sbjct: 197  ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            +   A RVFD M   +  S+N+MI  Y  L  V+ +  +F + N  + +PD++T      
Sbjct: 257  RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLT------ 309

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
                                         VS VL+A   LR L   +  + Y+L+ G   
Sbjct: 310  -----------------------------VSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            +  V   L+D+Y K   +  A++VF++M+ ++ V+WNS+ISGY   G  + A K+   M 
Sbjct: 341  ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400

Query: 626  EEEIKPDLVSW-----------------------------------NSLVSGYSIWGQSK 650
              E + D +++                                   N+L+  Y+  G+  
Sbjct: 401  IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            ++L I   M       + VTW ++IS  ++  ++   L+   QM++ ++ P+  T    L
Sbjct: 461  DSLKIFSSMGTG----DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              C  L   + GKEIHC  L+ G+  +  +   LI+MYSK G L+++  VF + + + + 
Sbjct: 517  PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +W  MI  + +YG G++A+  F ++ ++G  PD++ F A++ AC +SGLV+EG   F+ M
Sbjct: 577  TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
             T Y I P IEHY+C+VDLL ++  + +A +FI+ MP KPDA+IW ++L +CR  G +E 
Sbjct: 637  KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
            AE  SRR+ +L P +     L  N  A   +W+ V  +R S+ +  +     +SWI++ +
Sbjct: 697  AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGK 756

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI-DEEEKGKVLLSHTE 1009
             VHVFS+     P +  IY  L  L S M K GY+PD R V Q++ +EEEK +++  H+E
Sbjct: 757  NVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSE 816

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            +LAI +GL+ T+   P++V+KN RVC DCH   K +S + GREI +RD  RFH F++G C
Sbjct: 817  RLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTC 876

Query: 1070 SCNDCW 1075
            SC D W
Sbjct: 877  SCKDRW 882


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Cucumis sativus]
          Length = 679

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/612 (39%), Positives = 347/612 (56%), Gaps = 47/612 (7%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            M++ Y   G +D + S+FN +     +P  + +N ++  +  +G  +  +     M S G
Sbjct: 111  MVAFYASSGDIDSSVSVFNGIG----EPSSLLFNSMIRAYARYGFAERTVATYFSMHSWG 166

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            F  +  +   VL++  EL  +  G+  HG ILR GL +DLYV TSL+ +Y K   + +A 
Sbjct: 167  FTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAG 226

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            +VFDNM  R                                   D+ SWN+L++GY+  G
Sbjct: 227  KVFDNMTIR-----------------------------------DVSSWNALLAGYTKSG 251

Query: 648  QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNSTT 705
                AL I   M     + N+V+WT++ISG  Q+   +++L  F +M +ED  ++PN  T
Sbjct: 252  CIDAALAIFERMP----WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-- 763
            + S+L  C  L  L+ G++IH L  + G   +A V   L  MY+K G+L  AR  F K  
Sbjct: 308  IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 367

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               K L +WN MI  +A YG+G +A+  F E+++ G QPD ITFT LL+ C +SGLV+ G
Sbjct: 368  RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             KYF+ MST Y+I P +EHY+C+ DLLG+AG L EA   +  MP     +IWG+LL +CR
Sbjct: 428  LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 487

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
             H +LE AE A+R+LF LEP N+ NY L+ N+ A + RW++V++LR  +   G K     
Sbjct: 488  KHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGC 547

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            SWI+I+   H+F      HP   EIY  L  L  +MK  GY PDT  V  DI EEEK   
Sbjct: 548  SWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFN 607

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L++H+EKLA+ +G++ T +   +RV KN R+C DCHTA  ++S + GRE+ +RD  RFHH
Sbjct: 608  LIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHH 667

Query: 1064 FREGECSCNDCW 1075
            F+ G CSC D W
Sbjct: 668  FKGGCCSCGDYW 679



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 187/374 (50%), Gaps = 10/374 (2%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           + +  T L    LG +VHA ++ RG      +   ++ FY    D++S+  +F+ + +  
Sbjct: 76  VFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGE-P 134

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
             LL+N +I    R    E  +  +  M          T   +L++  ++ +   GK +H
Sbjct: 135 SSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVH 194

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G +L+  L+ +L V   LI +Y +  ++  A +VFD+M   ++SSWN++++ YT  G +D
Sbjct: 195 GLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCID 254

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSV 537
            A ++F +M       +I++W  ++SG+   G  Q  L+L   M  +  G RPN  ++  
Sbjct: 255 AALAIFERMPWR----NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMS 310

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD--NMKN 595
           VL A  +L  L+ GR+ H    R GL+ +  V  +L  MY K   L +A+  FD  N   
Sbjct: 311 VLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNE 370

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
           +N++AWN++I+ Y   G  + A     +M +  I+PD +++  L+SG S  G     L  
Sbjct: 371 KNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKY 430

Query: 656 IHHMKNS-GIYPNV 668
            +HM  +  I P V
Sbjct: 431 FNHMSTTYSINPRV 444



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 153/348 (43%), Gaps = 43/348 (12%)

Query: 195 FCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLY 253
           F FL   N  +    V   HA M+  G       +V S ++  Y   GD  S+   F   
Sbjct: 77  FQFLTGLNMLKLGHQV---HAHMLLRG--LQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131

Query: 254 FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLG 313
              S   ++S +  Y  +G   +  +  +  +H  G          +LK   +L++ W+G
Sbjct: 132 GEPSSLLFNSMIRAYARYG-FAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMG 190

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII----- 368
             VH  +++ G  FD+++  +L+  YGKC ++  A K+F  ++ + D   WN ++     
Sbjct: 191 KCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMT-IRDVSSWNALLAGYTK 249

Query: 369 -------MVKLRNEKWEN-------------------AIKLFREM--QFSSAKAISRTIV 400
                  +       W N                   A+ LF EM  + S  +    TI+
Sbjct: 250 SGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIM 309

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM--K 458
            +L ACA++     G+QIH    +  L SN SV   L +MY++   L  A   FD +   
Sbjct: 310 SVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRN 369

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           + NL +WN+MI++Y   G+   A S F +M  + IQPD IT+  LLSG
Sbjct: 370 EKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSG 417



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 15/219 (6%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           IS +LQN          +Q       P   + + + Q   GL +L+ G ++H   L  G 
Sbjct: 51  ISATLQN---------LLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGL 101

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              A V + ++  Y+ SG++ S+  VF      +   +N MI  +A YG  +  +  +  
Sbjct: 102 QPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFS 161

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGW--KYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
           +   GF  D  TF  +L   K+S  +   W  K    +     +   +   + ++ L GK
Sbjct: 162 MHSWGFTGDYFTFPFVL---KSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGK 218

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            G +++A      M  + D + W ALL      G ++ A
Sbjct: 219 CGEINDAGKVFDNMTIR-DVSSWNALLAGYTKSGCIDAA 256


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Glycine max]
          Length = 747

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/751 (32%), Positives = 402/751 (53%), Gaps = 74/751 (9%)

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
            QF+S  ++S    ++L+ C       + K+IH +++K+     + + N L+S Y++ +++
Sbjct: 8    QFNSM-SLSNHYCELLKHC------RDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRI 60

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
              A RVFD M   NL SWN+++SSY+ L  +     +F+ M +     D+++WN L+S +
Sbjct: 61   TYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTR----DMVSWNSLISAY 116

Query: 508  FTHGSY-QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
               G   Q+V      + +  F  N  ++S +L   ++   +  G + HG++++ G    
Sbjct: 117  AGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSY 176

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV--------------------------- 599
            ++VG+ L+DMY K   +  A++ FD M  +N+V                           
Sbjct: 177  VFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQE 236

Query: 600  ----AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---GYSIWGQSKEA 652
                +W ++I+G+   GL   A  +  +M  E ++ D  ++ S+++   G     + K+ 
Sbjct: 237  KDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQV 296

Query: 653  -LVIIHHMKNSGIY---------------------------PNVVTWTSLISGSLQNENY 684
               II       I+                            NVV+WT+++ G  QN   
Sbjct: 297  HAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYS 356

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E++K F  MQ   I+P+  T+ S++ +C  L  L+ G + HC  L +G I    V+  L
Sbjct: 357  EEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNAL 416

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            + +Y K G+++ +  +F + +     SW  ++ G+A +G   E + LF  +L  GF+PD 
Sbjct: 417  VTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDK 476

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF  +L+AC  +GLV++G + F+SM  ++ IIP  +HY+CM+DL  +AG L+EA  FI 
Sbjct: 477  VTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFIN 536

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MPF PDA  W +LL SCR H ++E  + A+  L KLEP N+A+Y L+ ++ A   +WE+
Sbjct: 537  KMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEE 596

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V  LR  M + G++     SWI+    VH+FSA+   +P + +IY EL  L  +M + GY
Sbjct: 597  VANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGY 656

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            VPD   V  D+D+ EK K+L  H+EKLAI +GL+      PIRV+KN RVC DCH A KY
Sbjct: 657  VPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKY 716

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S +  REI +RD ARFH F++G CSC D W
Sbjct: 717  ISKITQREILVRDAARFHLFKDGRCSCGDFW 747



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 217/515 (42%), Gaps = 73/515 (14%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y +        + F    +R    W+S +  Y   G  +Q + + +  +   G  
Sbjct: 80  TLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSV-KAYNLMLYNGPF 138

Query: 292 FRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK--------- 341
             +RI L+ +L L +K     LG++VH  ++K GF   V +   L++ Y K         
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198

Query: 342 ----------------------CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
                                 C  +E + +LF ++ + +D + W  +I    +N     
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQE-KDSISWTAMIAGFTQNGLDRE 257

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           AI LFREM+  + +    T   +L AC  V A  EGKQ+H Y++++  + N+ V + L+ 
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVD 317

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY +   ++ A  VF  M   N+ SW +M+  Y   GY + A  +F  M ++ I+PD   
Sbjct: 318 MYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPD--- 374

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
                   FT GS                         V+ +   L  L+ G + H   L
Sbjct: 375 -------DFTLGS-------------------------VISSCANLASLEEGAQFHCRAL 402

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            +GL   + V  +L+ +Y K   ++++  +F  M   + V+W +L+SGY   G      +
Sbjct: 403 VSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLR 462

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGS 678
           +   M     KPD V++  ++S  S  G  ++   I   M K   I P    +T +I   
Sbjct: 463 LFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLF 522

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +     E+ KF  +M      P++   +SLL +C
Sbjct: 523 SRAGRLEEARKFINKMP---FSPDAIGWASLLSSC 554



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 139/278 (50%), Gaps = 2/278 (0%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           M  +LI   +       + + F+    +    W++ +  +   G + +E ++++ E+  +
Sbjct: 210 MYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLD-REAIDLFREMRLE 268

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            +         +L  C  +MA   G +VHA +I+  +  ++ +  AL++ Y KC+ ++SA
Sbjct: 269 NLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSA 328

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F ++ + ++ + W  +++   +N   E A+K+F +MQ +  +    T+  ++ +CA 
Sbjct: 329 ETVFRKM-NCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCAN 387

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + +  EG Q H   L S L S ++V N L+++Y +   +E + R+F  M   +  SW ++
Sbjct: 388 LASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTAL 447

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +S Y   G  +    LF  M +   +PD +T+  +LS 
Sbjct: 448 VSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSA 485



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 139/305 (45%), Gaps = 15/305 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y +     SA   F     ++   W++ L  Y    G  +E ++++ ++   G+ 
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQ-NGYSEEAVKIFCDMQNNGIE 372

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  ++  C  L +   G + H   +  G    + +  AL+  YGKC  +E +++L
Sbjct: 373 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRL 432

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           FSE+S + D++ W  ++    +  K    ++LF  M     K    T + +L AC++ G 
Sbjct: 433 FSEMSYV-DEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGL 491

Query: 412 FHEGKQIHGYVLKS----ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWN 466
             +G QI   ++K      +E + +   C+I ++SR  +LE A +  + M    +   W 
Sbjct: 492 VQKGNQIFESMIKEHRIIPIEDHYT---CMIDLFSRAGRLEEARKFINKMPFSPDAIGWA 548

Query: 467 SMISSYTGLGYVDVA-WSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQ 524
           S++SS      +++  W+  + +   +++P       LLS  +   G ++ V  L +GM+
Sbjct: 549 SLLSSCRFHRNMEIGKWAAESLL---KLEPHNTASYILLSSIYAAKGKWEEVANLRKGMR 605

Query: 525 SLGFR 529
             G R
Sbjct: 606 DKGLR 610


>gi|30686506|ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g19720;
            AltName: Full=Protein DYW7
 gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein [Arabidopsis thaliana]
 gi|332191770|gb|AEE29891.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 894

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/850 (31%), Positives = 430/850 (50%), Gaps = 50/850 (5%)

Query: 267  DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF- 325
            DY    G + E  +    L  +G   +      +L+ C    +  LG  +HA     G  
Sbjct: 54   DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLF 110

Query: 326  -DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
             + DV ++  L++ Y KC  +  A K+F  + +  +   W+ +I    R  +W    KLF
Sbjct: 111  TEPDVFVETKLLSMYAKCGCIADARKVFDSMRE-RNLFTWSAMIGAYSRENRWREVAKLF 169

Query: 385  REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            R M             K+LQ CA  G    GK IH  V+K  + S L V N ++++Y++ 
Sbjct: 170  RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229

Query: 445  NKLELATRVFDSMKDHNLSSWNS-----------------------------------MI 469
             +L+ AT+ F  M++ ++ +WNS                                   +I
Sbjct: 230  GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289

Query: 470  SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
              Y  LG  D A  L  KM +  I  D+ TW  ++SG   +G     L + R M   G  
Sbjct: 290  GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
            PN  ++   + A + L+++  G E H   ++ G   D+ VG SL+DMY K   L++A++V
Sbjct: 350  PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409

Query: 590  FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
            FD++KN+++  WNS+I+GYC  G    A ++  +M++  ++P++++WN+++SGY   G  
Sbjct: 410  FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469

Query: 650  KEALVIIHHMKNSG-IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             EA+ +   M+  G +  N  TW  +I+G +QN    E+L+ F +MQ     PNS T+ S
Sbjct: 470  GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            LL  C  L   +  +EIH   L+        V   L D Y+KSG+++ +R +F     K 
Sbjct: 530  LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            + +WN +I G+ ++G+   A+ LF+++   G  P+  T ++++ A    G V+EG K F 
Sbjct: 590  IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 649

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            S++ DY+IIP +EH S MV L G+A  L+EA  FI+ M  + +  IW + L  CRIHG +
Sbjct: 650  SIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDI 709

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW-EDVERLRHSMDEVGVKSVLVWSWIQ 947
            + A  A+  LF LEP N+A  +++  + A+  +    +E  +   D + +K  L  SWI+
Sbjct: 710  DMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNL-LKKPLGQSWIE 768

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +  ++H F+        T      LY LV +M +L    D       I+EE + +    H
Sbjct: 769  VRNLIHTFTTGDQSKLCTD----VLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIH 824

Query: 1008 TEKLAIVYGLMKTK--SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
            +EK A+ +GL+ +   S+  IR++KN R+C DCH  AKY+S   G +I L D    HHF+
Sbjct: 825  SEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFK 884

Query: 1066 EGECSCNDCW 1075
             G+CSC D W
Sbjct: 885  NGDCSCKDYW 894



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 172/646 (26%), Positives = 293/646 (45%), Gaps = 56/646 (8%)

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           +S  K  S     E +++ +E      RN     A K    +    +K    T +K+L++
Sbjct: 31  KSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLES 90

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
           C   G+ H G+ +H        E ++ V   L+SMY++   +  A +VFDSM++ NL +W
Sbjct: 91  CIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTW 149

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           ++MI +Y+                                       ++ V  L R M  
Sbjct: 150 SAMIGAYS-----------------------------------RENRWREVAKLFRLMMK 174

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            G  P+      +LQ       ++ G+  H  +++ G+   L V  S++ +Y K   L  
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           A + F  M+ R+++AWNS++  YC  G    A +++ +ME+E I P LV+WN L+ GY+ 
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294

Query: 646 WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
            G+   A+ ++  M+  GI  +V TWT++ISG + N    ++L  F +M    + PN+ T
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354

Query: 706 MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
           + S +  C  L ++  G E+H + +K GFI D  V   L+DMYSK G L+ AR+VF    
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 414

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
           NK + +WN MI G+   G   +A  LF  + +   +P+ IT+  +++    +G   E   
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMD 474

Query: 826 YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK---PDATIWGALLGSC 882
            F  M  D  +      ++ ++    + G  DEA +  R M F    P++    +LL +C
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534

Query: 883 -RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
             + G     EI    L +      A  N + +  A S    D+E  R     +  K ++
Sbjct: 535 ANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSG---DIEYSRTIFLGMETKDII 591

Query: 942 VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            W+ +    ++H     G+  PA          L ++MK  G  P+
Sbjct: 592 TWNSLIGGYVLH-----GSYGPALA--------LFNQMKTQGITPN 624



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 17/261 (6%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLY-----FSRSYADWSSFLEDYESFGGEVQELLEVWGELH 286
           ++I  Y++ GD   A   F          R+ A W+  +  Y    G+  E LE++ ++ 
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ-NGKKDEALELFRKMQ 516

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
               +  S  +  +L  C  L+   +  E+H  +++R  D    +K AL + Y K  D+E
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            +  +F  + + +D + WN +I   + +  +  A+ LF +M+         T+  ++ A 
Sbjct: 577 YSRTIFLGM-ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635

Query: 407 AKVGAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
             +G   EGK++     + Y +  ALE     C+ ++ +Y R N+LE A +    M   +
Sbjct: 636 GLMGNVDEGKKVFYSIANDYHIIPALEH----CSAMVYLYGRANRLEEALQFIQEMNIQS 691

Query: 462 LSS-WNSMISSYTGLGYVDVA 481
            +  W S ++     G +D+A
Sbjct: 692 ETPIWESFLTGCRIHGDIDMA 712


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Cucumis sativus]
          Length = 797

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 271/823 (32%), Positives = 415/823 (50%), Gaps = 91/823 (11%)

Query: 301  LKLCTKL--MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD- 357
            L+LC+     +F L   VHA +I  GF    H    L+  Y K  ++  A +LF E+ + 
Sbjct: 18   LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNP 77

Query: 358  -------------------------------LEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
                                           + D + +N +I     N    +A++LFR 
Sbjct: 78   DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 387  MQFSSAKAISRTIVKMLQACAK-VGAFHEGKQIHGYVLKSALES-NLSVCNCLISMY-SR 443
            M+    +    T   +L A    VG   +  Q+H  V+K+ +   + SV N L+S+Y  R
Sbjct: 138  MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 444  NNKLEL-------ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
             ++L +       A ++FD M   +  +W +MI+ Y     ++ A  +F  M    ++  
Sbjct: 198  ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM----VENL 253

Query: 497  IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
               WN ++SG+   G +Q  LTL R M+ LG + +  + + ++ A   +   + G++ H 
Sbjct: 254  GAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHA 313

Query: 557  YILRNGLD----YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            YIL+N L+    + L V  +L+ +Y KN+ +  A+++F  M  RN               
Sbjct: 314  YILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRN--------------- 358

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                                +++WN+++SGY   G+ +EA      M       N++T T
Sbjct: 359  --------------------IITWNAILSGYVNAGRMEEAKSFFEEMP----VKNLLTLT 394

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
             +ISG  QN    E LK F QM+ +  +P     +  L  C  LG L+NG+++H   +  
Sbjct: 395  VMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHL 454

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G+     V   +I MY+K G +++A  VF    +  L SWN MI     +G+G +AI LF
Sbjct: 455  GYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELF 514

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             ++L+ G  PD ITF  +L AC ++GLVE+G  YF+SM   Y I P  +HY+ MVDL  +
Sbjct: 515  DQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCR 574

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG    A   I +MP KP A +W ALL  CRIHG+++    A+ +LFKL P N   Y L+
Sbjct: 575  AGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLL 634

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A   RW +V ++R  M +  V+     SWI+++  VHVF  +   HP    +Y  L
Sbjct: 635  SNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYL 694

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L  EMKKLGY+PDT+ V  D++ E+K   L +H+EKLA+ +G+MK    A +RV KN 
Sbjct: 695  EQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNI 754

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH A K+MS V  REI +RD  RFHHF+ G+CSC D W
Sbjct: 755  RICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/716 (33%), Positives = 381/716 (53%), Gaps = 72/716 (10%)

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
            + RT   +L+ CA       G+ +H  +    L S       L +MY +  +   A RVF
Sbjct: 15   VLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVF 74

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            D M   +  +WN++++ Y   G    A     +M                          
Sbjct: 75   DRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQG------------------------ 110

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                     +  G RP+  ++  VL A  + R L   RE H + LR GLD  + V T+++
Sbjct: 111  ---------EEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVL 161

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI----- 629
            D Y K   ++ A+ VFD M  RN V+WN++I GY   G    A  +  +M +E +     
Sbjct: 162  DAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDA 221

Query: 630  ------------------------------KPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
                                            ++   N+L++ Y+   ++  A  + + +
Sbjct: 222  SVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNEL 281

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
             N       ++W ++I G  QNE   ++ + F +MQ E+++P+S T+ S++     +   
Sbjct: 282  GNK---KTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDP 338

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
               + IH   +++   +D YV T LIDMYSK G +  AR +F  + ++ + +WN MI G+
Sbjct: 339  LQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGY 398

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
              +G G+ A+ LF E+  TG  P+  TF ++LAAC ++GLV+EG KYF SM  DY + P 
Sbjct: 399  GSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPG 458

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            +EHY  MVDLLG+AG LDEAW FI+ MP +P  +++GA+LG+C++H ++E AE +++ +F
Sbjct: 459  MEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIF 518

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +L P     + L+ N+ A ++ W+DV R+R +M++ G++    WS IQ+   VH F +  
Sbjct: 519  ELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGS 578

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              H    +IY  L  L+ E+K +GYVPDT  ++ D++++ K ++L +H+EKLAI YGL++
Sbjct: 579  TNHQHAKDIYARLAKLIEEIKDMGYVPDTDSIH-DVEDDVKAQLLNTHSEKLAIAYGLIR 637

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            T     I++ KN RVC+DCH A K +SL+ GREI +RD  RFHHF++G+CSC D W
Sbjct: 638  TAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 212/498 (42%), Gaps = 71/498 (14%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R  T +LKLC        G  VHA L  RG   +     AL N Y KCR    A ++F  
Sbjct: 17  RTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDR 76

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA--KAISRTIVKMLQACAKVGAF 412
           +    D + WN ++    RN    +A++    MQ      +  S T+V +L ACA   A 
Sbjct: 77  MPS-RDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARAL 135

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
           H  +++H + L++ L+  ++V   ++  Y +   +E A  VFD M   N  SWN+MI  Y
Sbjct: 136 HACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGY 195

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              G    A +LF +M    +Q                                G     
Sbjct: 196 ADNGNATEAMALFWRM----VQE-------------------------------GVDVTD 220

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
           +SV   LQA  EL  L   R  H  ++R GL  ++ V  +L+  Y K      A +VF+ 
Sbjct: 221 ASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNE 280

Query: 593 MKNRNI-VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---------- 641
           + N+   ++WN++I G+       +A+++  +M+ E ++PD  +  S++           
Sbjct: 281 LGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQ 340

Query: 642 -----GYSIWGQSKE------ALV----------IIHHMKNSGIYPNVVTWTSLISGSLQ 680
                GYSI  Q  +      AL+          I   + +S    +V+TW ++I G   
Sbjct: 341 ARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGS 400

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           +   + +++ F +M+     PN TT  S+L  C   GL+  G++      K+  ++    
Sbjct: 401 HGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGME 460

Query: 741 ATG-LIDMYSKSGNLKSA 757
             G ++D+  ++G L  A
Sbjct: 461 HYGTMVDLLGRAGKLDEA 478



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 152/305 (49%), Gaps = 8/305 (2%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVK---SLIFHYLEFGDFTSAAKAFFLYFSRSYADW 261
           R L + +  HA  ++ G     D++V    +++  Y + G   +A   F     R+   W
Sbjct: 133 RALHACREVHAFALRAGL----DELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSW 188

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           ++ ++ Y   G   + +   W  +  +GV      +   L+ C +L        VH  L+
Sbjct: 189 NAMIDGYADNGNATEAMALFW-RMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLV 247

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           + G   +V +  AL+  Y KC+  + A ++F+E+ + +  + WN +I+   +NE  E+A 
Sbjct: 248 RVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAE 307

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
           +LF  MQ  + +  S T+V ++ A A +    + + IHGY ++  L+ ++ V   LI MY
Sbjct: 308 RLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMY 367

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           S+  ++ +A R+FDS +D ++ +WN+MI  Y   G+   A  LF +M  +   P+  T+ 
Sbjct: 368 SKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFL 427

Query: 502 CLLSG 506
            +L+ 
Sbjct: 428 SVLAA 432



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 6/182 (3%)

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           P   T ++LL+ C     L  G+ +H      G   ++  +T L +MY K      AR V
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 761 FRKSANKTLASWNCMIMGFAIYG---NGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
           F +  ++   +WN ++ G+A  G   +  EA++   +  E G +PD++T  ++L AC ++
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRM-QGEEGGERPDSVTLVSVLPACADA 132

Query: 818 GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
             +    +   + +    +   +   + ++D   K G ++ A      MP + ++  W A
Sbjct: 133 RAL-HACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR-NSVSWNA 190

Query: 878 LL 879
           ++
Sbjct: 191 MI 192



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 7/178 (3%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           ++  +  +   L A W    +H   I+   D DV++  AL++ Y KC  V  A +LF   
Sbjct: 328 VIPAVADISDPLQARW----IHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSA 383

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            D    + WN +I     +   + A++LF EM+ + +     T + +L AC+  G   EG
Sbjct: 384 RD-RHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEG 442

Query: 416 KQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           ++    + K   LE  +     ++ +  R  KL+ A     +M  +  +S + +M+ +
Sbjct: 443 QKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGA 500


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/662 (36%), Positives = 363/662 (54%), Gaps = 59/662 (8%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMY-SRN-NKLELATRVFDSMKDHNLSSWNSMISSYT 473
            KQIH   +K+ +  N  + N ++S   SR    +  A ++FD++ + ++ SWN M   Y+
Sbjct: 31   KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYS 90

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             +    +  SL+ +M    ++PD  T+  L  G FT                        
Sbjct: 91   RIACPKLGVSLYLEMLERNVKPDCYTYPFLFKG-FTR----------------------- 126

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
              SV LQ          GRE H ++++ GLD +++   +L++MY     +  A+ +FD  
Sbjct: 127  --SVALQ---------LGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMS 175

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
               ++V WN++ISGY                    IK D++SW ++V+G+   GQ   A 
Sbjct: 176  CKSDVVTWNAMISGY------------------NRIKKDVISWTAIVTGFVNTGQVDAAR 217

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               H M       + V+WT++I G L+   Y+E+L  F +MQ   IKP+  TM S+L  C
Sbjct: 218  KYFHKMPER----DHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTAC 273

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              LG L+ G+ I     KN    D +V   LIDMY K GN++ A  +F     +   +W 
Sbjct: 274  AQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWT 333

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             M++G AI G G+EA+ +F ++L+    PD +T+  +L+AC ++G+V+EG K+F SM+  
Sbjct: 334  AMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTAR 393

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            + I P I HY CMVDLLGKAG+L EA + I+ MP KP++ +WGALLG+CRIH   E AE 
Sbjct: 394  HGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAER 453

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A  ++ +LEP N A Y L  N+ A  N+W+ +  LR  M + G+K     S I+++ IVH
Sbjct: 454  AIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVH 513

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             F A    HP T EIY +L  + S++K  GY P+T  V+ DI EE+K   +  H+EKLAI
Sbjct: 514  EFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAI 573

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +GL+ +     IR++KN R+C DCH  AK +S V  RE+ +RD  RFHHFR G CSC D
Sbjct: 574  AFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKD 633

Query: 1074 CW 1075
             W
Sbjct: 634  YW 635



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 193/422 (45%), Gaps = 34/422 (8%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNF-----YGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
           ++H+  IK G   +  ++  +++F     +G   D+  A +LF  + +      WN +  
Sbjct: 32  QIHSRTIKTGIICNPIIQNKILSFCCSREFG---DMCYARQLFDTIPE-PSVFSWNIMFK 87

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
              R    +  + L+ EM   + K    T   + +   +  A   G+++H +V+K  L+S
Sbjct: 88  GYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDS 147

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY--------------TGL 475
           N+   N LI+MYS    +++A  +FD     ++ +WN+MIS Y              TG 
Sbjct: 148 NVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGF 207

Query: 476 ---GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              G VD A   F+KM     + D ++W  ++ G+     Y+  L L R MQ+   +P+ 
Sbjct: 208 VNTGQVDAARKYFHKMP----ERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDE 263

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++  VL A  +L  L+ G     YI +N +  D +VG +L+DMY K   ++ A  +F+ 
Sbjct: 264 FTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNT 323

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           +  R+   W +++ G    G    A  M +QM +  + PD V++  ++S  +  G   E 
Sbjct: 324 LPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEG 383

Query: 653 LVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
                 M    GI PN+  +  ++    +  + +E+ +    M    +KPNS    +LL 
Sbjct: 384 KKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMP---MKPNSIVWGALLG 440

Query: 712 TC 713
            C
Sbjct: 441 AC 442



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 190/452 (42%), Gaps = 91/452 (20%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYL---EFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           +K  H++ IK G I N   ++++ I  +    EFGD   A + F      S   W+   +
Sbjct: 30  LKQIHSRTIKTGIICNP--IIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFK 87

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y       +  + ++ E+  + V         + K  T+ +A  LG E+H  ++K G D
Sbjct: 88  GYSRIACP-KLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLD 146

Query: 327 FDVHLKCALMNFYGKC---------------RDVESANKLFSEVSDLEDDLL-------- 363
            +V    AL+N Y  C                DV + N + S  + ++ D++        
Sbjct: 147 SNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTG 206

Query: 364 ------------------------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
                                   W  +I   LR   ++ A+ LFREMQ S  K    T+
Sbjct: 207 FVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTM 266

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           V +L ACA++GA   G+ I  Y+ K+ ++++  V N LI MY +   +E+A  +F+++  
Sbjct: 267 VSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQ 326

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            +  +W +M+      G  + A ++F++M  + + PD +T+                   
Sbjct: 327 RDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTY------------------- 367

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL-RNGLDYDLYVGTSLMDMYV 578
                 +G          VL A T   ++  G++    +  R+G++ ++     ++D+  
Sbjct: 368 ------VG----------VLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLG 411

Query: 579 KNDCLQNAQEVFDNMKNR-NIVAWNSLISGYC 609
           K   L+ A E+  NM  + N + W +L+ G C
Sbjct: 412 KAGHLKEAHEIIKNMPMKPNSIVWGALL-GAC 442



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 7/174 (4%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS--GNLKSAREVFRKSA 765
           SL +TC  +  L   K+IH   +K G I +  +   ++        G++  AR++F    
Sbjct: 19  SLFETCKSMYHL---KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIP 75

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
             ++ SWN M  G++     K  + L+ E+LE   +PD  T+  L      S  ++ G +
Sbjct: 76  EPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG-R 134

Query: 826 YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
                   Y +   +  ++ ++++    G +D A   I  M  K D   W A++
Sbjct: 135 ELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARG-IFDMSCKSDVVTWNAMI 187


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/593 (38%), Positives = 346/593 (58%), Gaps = 41/593 (6%)

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +LFNK      + ++ +WN +++     G     L     M+ L  +PN S+    +++ 
Sbjct: 30   TLFNKYVD---KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 86

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            + L  L  GR++H   L  G + DL+V ++L+DMY K   L++A+ +FD + +RNIV+W 
Sbjct: 87   SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 146

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
            S+I+GY        A ++ + M E     D++SWNS+++ Y+  G S E++ I H M   
Sbjct: 147  SMITGYVQNDDAHRALRVFDGMAER----DVISWNSIIAVYAQNGMSTESMEIFHRMVKD 202

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
            G                                  +I  N+ T+S++L  C   G  + G
Sbjct: 203  G----------------------------------EINYNAVTLSAVLLACAHSGSQRLG 228

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            K IH   +K G   + +V T +IDMY K G ++ AR+ F +   K + SW+ M+ G+ ++
Sbjct: 229  KCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMH 288

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G+ KEA+ +F+E+   G +P+ ITF ++LAAC ++GL+EEGW +F +MS ++++ P +EH
Sbjct: 289  GHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEH 348

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            Y CMVDLLG+AGYL EA+D I+ M  +PD  +WGALLG+CR+H +++  EI++R+LF+L+
Sbjct: 349  YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELD 408

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P N   Y L+ N+ A + RWEDVER+R  M   G+     +S + I   VHVF      H
Sbjct: 409  PKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREH 468

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P   +IY  L  L  +++++GYVPD   V  D+  EEK  VL  H+EKLA+ +G+M T  
Sbjct: 469  PQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVP 528

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               I +IKN RVC DCHTA K++S +  REI +RD  RFHHFR+G CSC D W
Sbjct: 529  GTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 176/365 (48%), Gaps = 9/365 (2%)

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LF++  D  +   WN +I    R+     A++ F  M+  S K    T    +++C+ + 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
             H G+Q H   L    E +L V + L+ MYS+  +L  A  +FD +   N+ SW SMI+
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FR 529
            Y        A  +F+ M     + D+I+WN +++ +  +G     + +   M   G   
Sbjct: 151 GYVQNDDAHRALRVFDGM----AERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 206

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
            N  ++S VL A       + G+  H  +++ GL+ +++VGTS++DMY K   ++ A++ 
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 266

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           FD M+ +N+ +W+++++GY   G    A ++  +M    +KP+ +++ S+++  S  G  
Sbjct: 267 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 326

Query: 650 KEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
           +E       M +   + P V  +  ++    +    +E+      M+   ++P+     +
Sbjct: 327 EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK---LRPDFVVWGA 383

Query: 709 LLQTC 713
           LL  C
Sbjct: 384 LLGAC 388



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 32/277 (11%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S + +    G  V E L  +  +    +          +K C+ L+    G + H   
Sbjct: 44  WNSVIAELARSGDSV-EALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 102

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD----------------------- 357
           +  GF+ D+ +  AL++ Y KC ++  A  LF E+S                        
Sbjct: 103 LIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRAL 162

Query: 358 ------LEDDLL-WNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKV 409
                  E D++ WN II V  +N     ++++F  M +       + T+  +L ACA  
Sbjct: 163 RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHS 222

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G+   GK IH  V+K  LESN+ V   +I MY +  K+E+A + FD M++ N+ SW++M+
Sbjct: 223 GSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMV 282

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           + Y   G+   A  +F +MN + ++P+ IT+  +L+ 
Sbjct: 283 AGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAA 319



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 12/233 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S+I  Y++  D   A + F     R    W+S +  Y    G   E +E++  +   G I
Sbjct: 147 SMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQ-NGMSTESMEIFHRMVKDGEI 205

Query: 292 -FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
            + +  L+ +L  C    +  LG  +H  +IK G + +V +  ++++ Y KC  VE A K
Sbjct: 206 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARK 265

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
            F  + + ++   W+ ++     +   + A+++F EM  +  K    T V +L AC+  G
Sbjct: 266 AFDRMRE-KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 324

Query: 411 AFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
              EG        H + ++  +E       C++ +  R   L+ A  +   MK
Sbjct: 325 LLEEGWHWFKAMSHEFDVEPGVEHY----GCMVDLLGRAGYLKEAFDLIKGMK 373


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/896 (29%), Positives = 443/896 (49%), Gaps = 76/896 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            H  ++K G + N   +  SL+  Y   G  + A K F      +   W+S +  Y    G
Sbjct: 272  HGYVVKCGLMSNVF-VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYAD-NG 329

Query: 274  EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD-VHLK 332
              +E+L ++  L   G+I     +  +++ C       +G ++   +IK G D   V + 
Sbjct: 330  HTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVA 389

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             +L++ +G    VE A+++F+ + +  D + WN II     N ++E ++  F  M+ +  
Sbjct: 390  NSLISMFGNYDSVEEASRVFNNMQE-RDTISWNSIITASAHNGRFEESLGHFFWMRRTHP 448

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            K    TI  +L AC        G+ +HG + KS LESN+ VCN L+SMY++    E A  
Sbjct: 449  KTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAEL 508

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            VF +M                                      D+I+WN +++ H   G 
Sbjct: 509  VFHTMP-----------------------------------ARDLISWNSMMASHVEDGK 533

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            Y + + LL  M       N  + +  L A   L  LK     H +++   + ++L +G +
Sbjct: 534  YSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNT 590

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC----------------FKGLFVN 616
            L+ MY K   +  AQ+V   M  R++V WN+LI G+                  +GL  N
Sbjct: 591  LVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSN 650

Query: 617  AKKMLNQMEEEEIKPDL-------VSWNSLVSGYSIWGQSKEALVIIHHM---KNSGIY- 665
               ++N +    + PD        +  + +V+G+ +    + +L+ ++      N+  Y 
Sbjct: 651  YITIVNLLGTC-MSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYI 709

Query: 666  ------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
                   N  TW ++ S +       E+LKF  +M+ + +  +  + S  L T G L +L
Sbjct: 710  FDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVL 769

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
              G+++H   +K GF  D YV    +DMY K G +     +      ++  SWN +I   
Sbjct: 770  DEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISAL 829

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A +G  ++A   FHE+L+ G +PD +TF +LL+AC + GLV+EG  YF SM++++ +   
Sbjct: 830  ARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTA 889

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            IEH  C++DLLG++G L EA  FI  MP  P+  +W +LL +C++HG+LE    A+ RLF
Sbjct: 890  IEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLF 949

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +L   + + Y L  N+ A + RW DVE +R  M+   +K     SWI++   V  F    
Sbjct: 950  ELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGD 1009

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP + +IY +L  L    ++ G++PDT    QD DEE+K   L +H+E++A+ +GL+ 
Sbjct: 1010 QFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLIN 1069

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +   +P+R+ KN RVC DCH+  K +S + GR+I +RD  RFHHF  G+CSC+D W
Sbjct: 1070 SAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 181/751 (24%), Positives = 333/751 (44%), Gaps = 95/751 (12%)

Query: 191 ISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF 250
           +  GF  ++E N  + L      HA  +K   I  +     +L+  Y +FG    A   F
Sbjct: 153 LQKGFSEISEGNVGKAL------HALCVK-DVIQQNTFYTNTLVNMYSKFGSIKYAQHVF 205

Query: 251 FLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAF 310
              + R+ A W++ +  +   G    + ++ +  +   GV   S ++  ++  C +    
Sbjct: 206 DKMYDRNDASWNNMISGFVRVGW-YHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCM 264

Query: 311 WLGV-EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
             G  ++H  ++K G   +V +  +L++FYG    V  ANKLF E+ +  + + W  +++
Sbjct: 265 TEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEE-PNIVSWTSLMV 323

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE- 428
               N   +  + ++R ++ +       T+  +++ C   G    G QI G V+KS L+ 
Sbjct: 324 CYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDT 383

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           S++SV N LISM+   + +E A+RV                               FN M
Sbjct: 384 SSVSVANSLISMFGNYDSVEEASRV-------------------------------FNNM 412

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                + D I+WN +++    +G ++  L     M+    + +  ++S +L A    + L
Sbjct: 413 Q----ERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHL 468

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
           K+GR  HG I ++GL+ ++ V  SL+ MY +    ++A+ VF  M  R++++WNS+++ +
Sbjct: 469 KWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASH 528

Query: 609 CFKGLFVNAKKMLNQMEEEE--------------------------------IKPDLVSW 636
              G + +A  +L +M +                                  +  +L+  
Sbjct: 529 VEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIG 588

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
           N+LV+ Y  +G   EA  +   M       +VVTW +LI G   +++   +++ F  M++
Sbjct: 589 NTLVTMYGKFGLMDEAQKVCKIMPER----DVVTWNALIGGHADDKDPNATIQAFNLMRR 644

Query: 697 EDIKPNSTTMSSLLQTCGGLG-LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           E +  N  T+ +LL TC     LL++G  IH   +  GF  D YV + LI MY++ G+L 
Sbjct: 645 EGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLN 704

Query: 756 SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
           ++  +F   ANK  ++WN +    A YG G+EA+     +   G   D  +F+  LA   
Sbjct: 705 TSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIG 764

Query: 816 NSGLVEEG-----WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
           N  +++EG     W        D  ++      +  +D+ GK G +D+ +  I  +P   
Sbjct: 765 NLTVLDEGQQLHSWIIKLGFELDEYVL------NATMDMYGKCGEIDDVFR-ILPIPKIR 817

Query: 871 DATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
               W  L+ +   HG    A  A   +  L
Sbjct: 818 SKRSWNILISALARHGFFRQATEAFHEMLDL 848


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/800 (32%), Positives = 403/800 (50%), Gaps = 120/800 (15%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN +I   ++  + ++AI +   M  +  +    T+  +L+AC ++ ++  G   HG + 
Sbjct: 85   WNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLIC 144

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             +  ESN+ +CN L++MYSR   LE A+ +FD +    +                     
Sbjct: 145  CNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID-------------------- 184

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM------QSLGFRPNGSSVSV 537
                        D+I+WN ++S H    +    L L   M      +    R +  S+  
Sbjct: 185  ------------DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD------ 591
            +L A   L+ +   +E HG  +RNG   D++VG +L+D Y K   ++NA +VF+      
Sbjct: 233  ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292

Query: 592  -------------------------NMKNRNI----VAWNSLISGYCFKGLFVNAKKMLN 622
                                     NM+  NI    V W ++I+GY  +G    A  +  
Sbjct: 293  VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352

Query: 623  QMEEEEIKPDLVSWNSLVSG---------------YSI----------WGQSKEALVIIH 657
            QM      P+ V+  S++S                YS+          +G   E L++ +
Sbjct: 353  QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 412

Query: 658  HMKN-----------SGIYP-------NVVTWTSLISGSLQNENYRESLKFFIQMQQED- 698
             + +             I+        NVVTWT +I G  Q  +  ++LK F++M  E  
Sbjct: 413  ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 472

Query: 699  -IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAY-VATGLIDMYSKSGNLK 755
             + PN+ T+S +L  C  L  ++ GK+IH   L++  +   AY VA  LI+MYSK G++ 
Sbjct: 473  GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 532

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            +AR VF   + K+  SW  M+ G+ ++G G EA+ +F ++ + GF PD ITF  +L AC 
Sbjct: 533  TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 592

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + G+V++G  YFDSMS DY + P  EHY+  +DLL + G LD+AW  ++ MP +P A +W
Sbjct: 593  HCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVW 652

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
             ALL +CR+H ++E AE A  +L ++   N  +Y L+ N+ A + RW+DV R+RH M + 
Sbjct: 653  VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 712

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            G+K     SW+Q  +    F      HP + +IY  L  L+  +K +GYVP+T     D+
Sbjct: 713  GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 772

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            DEEEK  +L+ H+EKLA+ YGL+ T    PIR+ KN RVC DCH+A  Y+S +   EI +
Sbjct: 773  DEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 832

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD +RFHHF+ G CSC   W
Sbjct: 833  RDPSRFHHFKNGSCSCGGYW 852



 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 259/589 (43%), Gaps = 57/589 (9%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G +   + V   +   G       L  +LK C +L ++  G   H  +   GF+ +V + 
Sbjct: 96  GRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFIC 155

Query: 333 CALMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQF- 389
            AL+  Y +C  +E A+ +F E++   ++D + WN I+   +++     A+ LF +M   
Sbjct: 156 NALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI 215

Query: 390 -----SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
                ++ ++   +IV +L AC  + A  + K++HG  +++    ++ V N LI  Y++ 
Sbjct: 216 VHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKC 275

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +E A +VF+ M+  ++ SWN+M++ Y+  G    A+ LF  M    I  D++TW  ++
Sbjct: 276 GLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVI 335

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN--- 561
           +G+   G     L + R M   G  PN  ++  VL A   L     G E H Y L+N   
Sbjct: 336 AGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLL 395

Query: 562 -------GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN--MKNRNIVAWNSLISGYCFKG 612
                  G D DL V  +L+DMY K    + A+ +FD+  ++ RN+V W  +I G+   G
Sbjct: 396 TLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYG 455

Query: 613 LFVNAKKMLNQMEEEE--IKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMKNSGIY 665
              +A K+  +M  E   + P+  + + ++   +       G+   A V+ HH  +S  Y
Sbjct: 456 DSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAY 515

Query: 666 ----------------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
                                        + ++WTS+++G   +    E+L  F +M++ 
Sbjct: 516 FVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKA 575

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
              P+  T   +L  C   G++  G      +    G    A      ID+ ++ G L  
Sbjct: 576 GFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDK 635

Query: 757 A-REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           A + V       T   W  ++    ++ N + A    ++L+E   + D 
Sbjct: 636 AWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG 684



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 217/514 (42%), Gaps = 105/514 (20%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +++SY   G  D A  +  ++  S      + WN L+  H   G   + + +   M   G
Sbjct: 57  VVASYLACGATDYALLVLERVTPS----PAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            R +  ++  VL+A  EL   + G   HG I  NG + ++++  +L+ MY +   L+ A 
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172

Query: 588 EVFDNMKNR---NIVAWNSLISGYCFKG-------LFVNAKKMLNQMEEEE--------- 628
            +FD +  R   ++++WNS++S +           LF     ++++    E         
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 629 IKP-------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           I P                         D+   N+L+  Y+  G  + A+ + + M+   
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME--- 289

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK----------------------- 700
            + +VV+W ++++G  Q+ N++ + + F  M++E+I                        
Sbjct: 290 -FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEAL 348

Query: 701 ------------PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN----------GFIKDA 738
                       PN  T+ S+L  C  LG    G EIH   LKN          G  +D 
Sbjct: 349 NVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDL 408

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSA--NKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            V   LIDMYSK  + K+AR +F       + + +W  MI G A YG+  +A+ LF E++
Sbjct: 409 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 468

Query: 797 ET--GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY--SCMVDLLGK 852
               G  P+A T + +L AC +   +  G K   +    ++   +  ++  +C++++  K
Sbjct: 469 SEPYGVAPNAYTISCILMACAHLAAIRIG-KQIHAYVLRHHQYDSSAYFVANCLINMYSK 527

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            G +D A     +M  K  A  W +++    +HG
Sbjct: 528 CGDVDTARHVFDSMSQK-SAISWTSMMTGYGMHG 560



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 177/420 (42%), Gaps = 52/420 (12%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  Y   G    E L V+ ++   G +     +  +L  C  L AF  G+E+HA  
Sbjct: 331 WTAVIAGYSQRGCS-HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYS 389

Query: 321 IKR----------GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIM 369
           +K           G D D+ +  AL++ Y KCR  ++A  +F ++   E +++ W  +I 
Sbjct: 390 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 449

Query: 370 VKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
              +     +A+KLF EM  +       + TI  +L ACA + A   GKQIH YVL+   
Sbjct: 450 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQ 509

Query: 428 --ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
              S   V NCLI+MYS+   ++ A  VFDSM   +  SW SM++ Y   G    A  +F
Sbjct: 510 YDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 569

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAVTE 544
           +KM  +   PD IT+  +L      G     L+    M +  G  P     +  +     
Sbjct: 570 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL--- 626

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             L ++GR    +                             + V D       V W +L
Sbjct: 627 --LARFGRLDKAW-----------------------------KTVKDMPMEPTAVVWVAL 655

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           +S          A+  LN++ E   + D  S+  + + Y+  G+ K+   I H MK SGI
Sbjct: 656 LSACRVHSNVELAEHALNKLVEMNAEND-GSYTLISNIYATAGRWKDVARIRHLMKKSGI 714


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/639 (35%), Positives = 363/639 (56%), Gaps = 36/639 (5%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            +++  + +G V  A  LF+K       PD+  WN ++  +  HG + + + +   MQ   
Sbjct: 113  LVNKASNIGEVSCARKLFDKFP----DPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVAC 168

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P+G S   VL+A + L  L+ GR  HG I R+G + D++V   L+ +Y K   +  A 
Sbjct: 169  VSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRAN 228

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-- 645
             VF  + +R IV+W S+ISGY   G  + A ++ ++M +  ++PD ++  S++  Y+   
Sbjct: 229  AVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVE 288

Query: 646  ---WGQSKEALVI--------------------IHHMKNSGIY------PNVVTWTSLIS 676
                G+S    VI                      H+  + ++      P+++ W ++IS
Sbjct: 289  DLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMIS 348

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G ++N    E+++ F  M+ ++I+P+S T++S +  C  +G L+  + +      + F  
Sbjct: 349  GYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRN 408

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            D  V T LID Y+K G++  AR VF +  +K +  W+ M++G+ ++G G+E+I+LFH + 
Sbjct: 409  DVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMR 468

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
            + G  P+ +TF  LL ACKNSGLVEEGW  F  M  DY I P  +HY+C+VDLLG+AG+L
Sbjct: 469  QAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIEPRHQHYACVVDLLGRAGHL 527

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
            D A++F+  MP +P  ++WGALL +C+IH H+   E A+ RLF L+P N+ +Y  + NL 
Sbjct: 528  DRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLY 587

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A S  W+ V ++R  M E G+   L +S I+I+  +  F A    HP + EI+ E+  L 
Sbjct: 588  ASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLE 647

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
              +K+ G+VP T  V  D++ EE  + L +H+E+LAI YGL+ T     +R+ KN R C 
Sbjct: 648  RRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACD 707

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +CH A K +S +  REI +RD  RFHHF++G CSC D W
Sbjct: 708  NCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 214/485 (44%), Gaps = 40/485 (8%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           ++  L+      G+ + A K F  +       W++ +  Y S  G     +E++  +   
Sbjct: 109 LIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCY-SRHGFFGHAIEMYARMQVA 167

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            V         +LK C+ L A  +G  VH  + + GF+ DV ++  L+  Y KC ++  A
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
           N +F  + D    + W  II    +N +   A+++F EM+ ++ +     +V +L+A   
Sbjct: 228 NAVFGRLVD-RTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTD 286

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           V     GK IHG V+K  LE    +   L S+Y++   + +A   F+ +++ +L  WN+M
Sbjct: 287 VEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAM 346

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           IS Y   GY + A  LF  M S  I+PD IT                             
Sbjct: 347 ISGYVKNGYAEEAIELFRLMKSKNIRPDSIT----------------------------- 377

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
                 V+  + A  ++  L+  R    YI  +    D+ V TSL+D Y K   +  A+ 
Sbjct: 378 ------VTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARF 431

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VFD + ++++V W++++ GY   G    +  + + M +  + P+ V++  L++     G 
Sbjct: 432 VFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGL 491

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            +E   + H M++ GI P    +  ++    +  +   +  F + M    I+P  +   +
Sbjct: 492 VEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMP---IEPGVSVWGA 548

Query: 709 LLQTC 713
           LL  C
Sbjct: 549 LLSAC 553



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 211/478 (44%), Gaps = 75/478 (15%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           +++A L+  G  +   L   L+N      +V  A KLF +  D  D  LWN I+    R+
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPD-PDVFLWNAIVRCYSRH 151

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             + +AI+++  MQ +       +   +L+AC+ + A   G+++HG + +   ES++ V 
Sbjct: 152 GFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQ 211

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L+++Y++  ++  A  VF  + D  + SW S+IS Y   G    A  +F++M  + ++
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR 271

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           PD   W  L+S                                VL+A T++  L++G+  
Sbjct: 272 PD---WIALVS--------------------------------VLRAYTDVEDLEHGKSI 296

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           HG +++ GL+ +  +  SL  +Y K   +  A+  F+ ++N +++ WN++ISGY   G  
Sbjct: 297 HGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYA 356

Query: 615 VNAKKMLNQMEEEEIKPD------------------LVSW-----------------NSL 639
             A ++   M+ + I+PD                  L  W                  SL
Sbjct: 357 EEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSL 416

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           +  Y+  G    A  +   + +     +VV W++++ G   +   RES+  F  M+Q  +
Sbjct: 417 IDTYAKCGSVDMARFVFDRIPDK----DVVVWSAMMVGYGLHGQGRESIILFHAMRQAGV 472

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            PN  T   LL  C   GL++ G ++       G          ++D+  ++G+L  A
Sbjct: 473 SPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRA 530



 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 23/102 (22%), Positives = 46/102 (45%)

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           +I+   L  G     ++   L++  S  G +  AR++F K  +  +  WN ++  ++ +G
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
               AI ++  +      PD  +F  +L AC     +E G +
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRR 194


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/628 (36%), Positives = 368/628 (58%), Gaps = 7/628 (1%)

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            +L T +F      N S    ++ SY   G   +   +F++M+      +++ +N ++  +
Sbjct: 39   KLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDR----NVVFYNVMIRSY 94

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              +  Y + L + R M + GFRP+  +   VL+A +    L+YG   HG +L+ GLD++L
Sbjct: 95   VNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNL 154

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +VG  L+ MY K  CL  A+ VFD M  +++V+WNS+++GY     F +A ++  +ME+ 
Sbjct: 155  FVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDY 214

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
              KPD  +  SL+   ++   S E ++ +  +  +    N+++W  +I   ++N    ++
Sbjct: 215  GQKPDGCTMASLMP--AVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQA 272

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            +  ++QM++  ++P++ T +S+L  CG L  L  G+ IH    K     +  +   LIDM
Sbjct: 273  VDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDM 332

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y++ G L  A+ VF +   + +ASW  +I  + + G G  A+ LF E+L +G  PD+I F
Sbjct: 333  YARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAF 392

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
             A+L+AC +SGL++EG  YF  M+ DY I P IEHY+C+VDLLG+AG +DEA++ I+ MP
Sbjct: 393  VAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMP 452

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
             +P+  +W  LL SCR+  +++   +A+  L +L P  S  Y L+ N+ A + RW++V  
Sbjct: 453  IEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTE 512

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            +R  M    ++     S ++++  VH F A    HP + EIY EL  LV++MK+LGYVP+
Sbjct: 513  IRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPE 572

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSL 1047
            T     D++EE+K   L  H+EKLAIV+ L+ T+    IR+ KN RVC DCH AAK +S 
Sbjct: 573  TDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQEYQ-IRITKNLRVCGDCHIAAKLISK 631

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            +  REI +RD  RFHHF++G CSC D W
Sbjct: 632  IVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 212/481 (44%), Gaps = 53/481 (11%)

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           L   LM  Y  C +     K+F E+SD  + + +N +I   + N ++++ + +FREM   
Sbjct: 55  LGIKLMRSYAACGEPGLTRKVFDEMSD-RNVVFYNVMIRSYVNNHRYDDGLLVFREMVNG 113

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             +  + T   +L+AC+       G  IHG VLK  L+ NL V N LI+MY +   L  A
Sbjct: 114 GFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEA 173

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD-------------- 496
            RVFD M   ++ SWNSM++ Y      D A  +  +M     +PD              
Sbjct: 174 RRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANT 233

Query: 497 -------------------IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
                              +I+WN ++  +  +      + L   M+     P+  + + 
Sbjct: 234 SSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFAS 293

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           VL A  +L  L  GR  H Y+ +  L  +L +  SL+DMY +  CL +A+ VFD MK R+
Sbjct: 294 VLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRD 353

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           + +W SLIS Y   G   NA  +  +M      PD +++ +++S  S  G   E  +   
Sbjct: 354 VASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFK 413

Query: 658 HMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG-- 714
            M +   I P +  +  L+    +     E+     QM    I+PN    ++LL +C   
Sbjct: 414 QMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMP---IEPNERVWATLLSSCRVF 470

Query: 715 ---GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF----RKSANK 767
               +G+L     +     ++G+    YV   L ++Y+K+G  K   E+     RK   K
Sbjct: 471 TNMDIGILAADNLLQLAPEQSGY----YVL--LSNIYAKAGRWKEVTEIRSVMKRKKIRK 524

Query: 768 T 768
           T
Sbjct: 525 T 525



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 13/230 (5%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  C  L A  LG  +H  + K+    ++ L+ +L++ Y +C  ++ A ++F  +    
Sbjct: 294 VLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMK-FR 352

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK--- 416
           D   W  +I       +  NA+ LF EM  S     S   V +L AC+  G   EG+   
Sbjct: 353 DVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYF 412

Query: 417 --QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYT 473
                 Y +   +E       CL+ +  R  +++ A  +   M  + N   W +++SS  
Sbjct: 413 KQMTDDYRITPRIEHYA----CLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCR 468

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
               +D+   +    N  ++ P+   +  LLS  +        +T +R +
Sbjct: 469 VFTNMDIG--ILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSV 516



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 12/163 (7%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           K++H +       ++  +   L+  Y+  G     R+VF + +++ +  +N MI  +   
Sbjct: 38  KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNS-----GLVEEGWKYFDSMSTDYNII 837
               + +L+F E++  GF+PD  T+  +L AC  S     GL+  G      +  D+N+ 
Sbjct: 98  HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVL--KVGLDFNLF 155

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
                 + ++ + GK G L EA      M +K D   W +++ 
Sbjct: 156 VG----NGLIAMYGKCGCLFEARRVFDEMIWK-DVVSWNSMVA 193


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
            [Glycine max]
          Length = 836

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 280/917 (30%), Positives = 463/917 (50%), Gaps = 103/917 (11%)

Query: 163  KPNSITNSPTSLALPPTDTLAKQAQLSC--ISSGF-CFLNETNKFRCLSSVKSKHAQMIK 219
            + N IT + +S  L    TL +  QL C  +  G  C    +N  + ++S        ++
Sbjct: 19   EANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASS-------VQ 71

Query: 220  MGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELL 279
            +G +       +SL +    FGD      + F+Y        +  +  Y S G   Q +L
Sbjct: 72   IGTL-------ESLDYARNAFGDDDGNMASLFMY--------NCLIRGYASAGLGDQAIL 116

Query: 280  EVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY 339
             ++ ++   G++        +L  C+K++A   GV+VH +++K G + D+ +  +L++FY
Sbjct: 117  -LYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFY 175

Query: 340  GKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
             +C  V+   KLF  +  LE +++ W  +I      +  + A+ LF +M  +  +    T
Sbjct: 176  AECGKVDLGRKLFDGM--LERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVT 233

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
            +V ++ ACAK+     GK++  Y+ +  +E +  + N L+ MY +   +  A ++FD   
Sbjct: 234  MVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECA 293

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
            + NL  +N+++S+     YV   W+                               +VL 
Sbjct: 294  NKNLVMYNTIMSN-----YVHHEWA------------------------------SDVLV 318

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
            +L  M   G RP+  ++   + A  +L  L  G+ SH Y+LRNGL+    +  +++DMY+
Sbjct: 319  ILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYM 378

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
            K    + A +VF++M N+ +V                                   +WNS
Sbjct: 379  KCGKREAACKVFEHMPNKTVV-----------------------------------TWNS 403

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            L++G    G  + A  I   M    +  ++V+W ++I   +Q   + E+++ F +MQ + 
Sbjct: 404  LIAGLVRDGDMELAWRIFDEM----LERDLVSWNTMIGALVQVSMFEEAIELFREMQNQG 459

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            I  +  TM  +   CG LG L   K +     KN    D  + T L+DM+S+ G+  SA 
Sbjct: 460  IPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAM 519

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             VF++   + +++W   I   A+ GN + AI LF+E+LE   +PD + F ALL AC + G
Sbjct: 520  HVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGG 579

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
             V++G + F SM   + I P I HY CMVDLLG+AG L+EA D I++MP +P+  +WG+L
Sbjct: 580  SVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSL 639

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            L +CR H ++E A  A+ +L +L P     + L+ N+ A + +W DV R+R  M E GV+
Sbjct: 640  LAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQ 699

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
             V   S I++  ++H F++    H     I   L  +   + + GYVPDT  V  D+DE+
Sbjct: 700  KVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQ 759

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            EK  +L  H+EKLA+ YGL+ T    PIRV+KN R+CSDCH+ AK +S +  REI +RD 
Sbjct: 760  EKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDN 819

Query: 1059 ARFHHFREGECSCNDCW 1075
             R+H F+EG CSC D W
Sbjct: 820  NRYHFFKEGFCSCRDYW 836


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/668 (36%), Positives = 377/668 (56%), Gaps = 22/668 (3%)

Query: 410  GAFHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
            G FH  +      L   + E N    N L+S Y +N  +  A +VFD M + N+ SW SM
Sbjct: 56   GYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSM 115

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            +  Y   G +D A  LF +M     + ++++W  +L G    G       L      +  
Sbjct: 116  VRGYVQEGLIDEAELLFWRMP----EKNVVSWTVMLGGLIEDGRVDEARRLF---DMIPV 168

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            +   +S +++    +E RL +  RE    I       ++   TS++  Y  N+ +  A++
Sbjct: 169  KDVVASTNMIGGLCSEGRLSE-ARE----IFDEMPQRNVVAWTSMISGYAMNNKVDVARK 223

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
            +F+ M ++N V W +++ GY   G    A ++   M    +KP + + N ++ G+ + G+
Sbjct: 224  LFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMP---VKP-VAACNGMIMGFGLNGE 279

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
              +A  +   MK      +  TW++LI    +     E+L  F  MQ+E ++PN  ++ S
Sbjct: 280  VGKARWVFDQMKEK----DDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIIS 335

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            +L  CG L  L +G+++H   +++ F  D YV++ LI MY K G+L + + VF + ++K 
Sbjct: 336  ILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKD 395

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            +  WN +I G+A +G G++A+ +FHE+  +G  PD ITF  +L+AC  +G V+EG + F+
Sbjct: 396  IVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFE 455

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            SM + Y +    EHY+CMVDLLG+AG L+EA + I  MP + DA +WGALL +CR H +L
Sbjct: 456  SMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNL 515

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
            + AEIA+++L +LEP ++  Y L+ NL A  +RW+DV  LR +M    V      SWI++
Sbjct: 516  DLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEV 575

Query: 949  DQIVHVFSAEG-APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            D  VH+F+  G A HP    I  +L  L + +++ GY PD   V  D+DEE+K   L  H
Sbjct: 576  DNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHH 635

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EK+A+ YGL+K     PIRV+KN RVC DCH+A K ++ V GREI LRD  RFHHF++G
Sbjct: 636  SEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDG 695

Query: 1068 ECSCNDCW 1075
             CSC D W
Sbjct: 696  LCSCRDFW 703



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 1/187 (0%)

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           +G   +V  A  +F ++ + +DD  W+ +I +  R      A+ LF  MQ    +    +
Sbjct: 274 FGLNGEVGKARWVFDQMKE-KDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPS 332

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           I+ +L  C  + +   G+Q+H  +++S  + ++ V + LI+MY +   L    RVFD   
Sbjct: 333 IISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS 392

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
             ++  WNS+I+ Y   G+ + A  +F++M SS   PD IT+  +LS     G  +  L 
Sbjct: 393 SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLE 452

Query: 519 LLRGMQS 525
           +   M+S
Sbjct: 453 IFESMKS 459



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 11/290 (3%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           G+   A   F     +    WS+ ++ YE  G E+ E L ++  +  +GV      +  I
Sbjct: 278 GEVGKARWVFDQMKEKDDGTWSALIKIYERKGFEL-EALALFSLMQREGVRPNFPSIISI 336

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L +C  L +   G +VH+ L++  FD D+++   L+  Y KC D+ +  ++F   S  +D
Sbjct: 337 LSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSS-KD 395

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI-H 419
            ++WN II    ++   E A+++F EM  S A     T + +L AC   G   EG +I  
Sbjct: 396 IVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFE 455

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS---SYTGL 475
               K  ++       C++ +  R  KL  A  + ++M  + +   W +++S   ++  L
Sbjct: 456 SMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNL 515

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
              ++A     ++  S   P I+  N   S       +++V  L + M++
Sbjct: 516 DLAEIAAKKLLQLEPSSAGPYILLSNLYAS----QSRWKDVAELRKTMRA 561


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/580 (37%), Positives = 350/580 (60%), Gaps = 3/580 (0%)

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            +++ +N ++  +  +G YQ+ L + + M + GF P+  +   VL+A +    L  G + H
Sbjct: 101  NVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIH 160

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            G +++ GLD +LY+G  L+ MY K   L  A+ V D M  R++V+WNS+++GY   G F 
Sbjct: 161  GAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFN 220

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
            +A K+  +ME+ ++KPD  +  SL+   ++   S + ++ +  M       ++++W  +I
Sbjct: 221  DALKLCREMEDLKLKPDAGTMGSLLP--AVTNTSCDNVLYVKDMFVKLKEKSLISWNVMI 278

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            +  + N    E++  ++QMQ   ++P++ ++SS+L  CG L     G+ IH    +    
Sbjct: 279  AVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLR 338

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             +  +   LIDMY+K G LK AR VF +   + + SW  MI  + + G GK+A+ LF ++
Sbjct: 339  PNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKM 398

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
             ++GF PD I F ++LAAC ++GLV+EG   F+ M+ +Y I P IEHY+CMVDLLG+AG 
Sbjct: 399  RDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGK 457

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            +DEA+   R MP +P+  +WG+LL +CR++  +  A +A+  LF+L P  S  Y L+ N+
Sbjct: 458  IDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNI 517

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A + RW+DVE +R  M+  G+K +   S ++I+  V+ F A    H  + EIY  L  L
Sbjct: 518  YAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVL 577

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
            V  MK+LGY+P+T     D++EE+K   L  H+EKLAIV+ ++ TK  + IR+ KN RVC
Sbjct: 578  VGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVC 637

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH A K +S +  REI +RD  RFHHFR+G CSC D W
Sbjct: 638  GDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 193/427 (45%), Gaps = 37/427 (8%)

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           LI +    +  L   LM  Y  C +      +F E++D ++ + +N +I   + N  +++
Sbjct: 62  LIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITD-KNVVFFNVMIRSYVNNGLYQD 120

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A+ +F+ M        + T   +L+AC+  G    G QIHG V+K  L+ NL + N L+S
Sbjct: 121 ALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVS 180

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD--- 496
           MY +   L+ A RV D M   ++ SWNSM++ Y   G  + A  L  +M   +++PD   
Sbjct: 181 MYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGT 240

Query: 497 ------------------------------IITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
                                         +I+WN +++ +  +      + L   MQ  
Sbjct: 241 MGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVH 300

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
           G  P+  S+S VL A  +L     GR  H Y+ R  L  +L +  +L+DMY K  CL+ A
Sbjct: 301 GVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEA 360

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           + VFD M  R++V+W S+IS Y   G   +A  +  +M +    PD +++ S+++  S  
Sbjct: 361 RAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHA 420

Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
           G   E     + M   GI P +  +  ++    +     E+     QM  E   PN    
Sbjct: 421 GLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPME---PNERVW 477

Query: 707 SSLLQTC 713
            SLL  C
Sbjct: 478 GSLLSAC 484



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 10/165 (6%)

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           L+  Y+  G     R +F +  +K +  +N MI  +   G  ++A+L+F  +   GF PD
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136

Query: 804 AITFTALLAACKNSGLVEEGWKYFDS---MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
             T+  +L AC  SG +  G +   +   +  D N+       + +V + GK  +LD A 
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIG----NGLVSMYGKCKWLDAAR 192

Query: 861 DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL--FKLEP 903
             +  MP + D   W +++     +G    A    R +   KL+P
Sbjct: 193 RVLDEMPGR-DMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKP 236


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/650 (36%), Positives = 366/650 (56%), Gaps = 39/650 (6%)

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            N+ +  S++ +Y   G V  A+ +F++M     + D+  WN +LSG   +    + +TLL
Sbjct: 101  NVFASGSLVHAYLRFGRVAEAYRVFDEMP----ERDVPAWNAMLSGLCRNTRAADAVTLL 156

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
              M   G   +  ++S VL     L         H Y +++GL  +L+V  +L+D+Y K 
Sbjct: 157  GRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKL 216

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
              L  A  VF  M  R++V WNS+IS     G    A ++ + M E  + PD+++  SL 
Sbjct: 217  GMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLA 276

Query: 641  SGYSIWGQSKEALVIIHHMKNSG---------------------------IYPN-----V 668
            S  +  G    A  +  +++  G                           ++ N     V
Sbjct: 277  SAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDV 336

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            V+W +LI+G +QN    E+++ +  M   E +KP   T  S+L     LG LQ G  +H 
Sbjct: 337  VSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHA 396

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            L +K G   D YV T LID+Y+K G L  A  +F     ++   WN +I G  ++G+G +
Sbjct: 397  LSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAK 456

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF ++ +   +PD +TF +LLAAC ++GLV++G  +FD M T Y I+P  +HY+CMV
Sbjct: 457  ALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMV 516

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            D+LG+AG LDEA++FI++MP KPD+ +WGALLG+CRIHG++E  ++AS+ LF+L+P N  
Sbjct: 517  DMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVG 576

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF--SAEGAPHPAT 965
             Y LM N+ A   +W+ V+ +R  +    ++    WS +++   V VF    +  PHP  
Sbjct: 577  YYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQH 636

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
             EI   L+ L+++MK  GYVPD   V QD++E+EK ++L +H+E+LAI +G++ T    P
Sbjct: 637  EEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTP 696

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + + KN RVC DCH+A KY+S +  REI +RD  RFHHF++G CSC D W
Sbjct: 697  LHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 157/628 (25%), Positives = 279/628 (44%), Gaps = 65/628 (10%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
           +S    HA  +++G +  +     SL+  YL FG    A + F     R    W++ L  
Sbjct: 83  ASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSG 142

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
                    + + + G + G+GV   +  L+ +L +C  L    L + +H   +K G   
Sbjct: 143 L-CRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSG 201

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           ++ +  AL++ YGK   +  A+ +F  ++ L D + WN II    +  K   A++LF  M
Sbjct: 202 ELFVCNALIDVYGKLGMLTEAHWVFGGMA-LRDLVTWNSIISANEQGGKVAAAVELFHGM 260

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSRNNK 446
             S       T+V +  A A+ G     K +H YV +   +  ++   N ++ MY++ +K
Sbjct: 261 MESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSK 320

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ A +VFD++ D ++ SWN++I+ Y   G  + A  ++N M++                
Sbjct: 321 IDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHE-------------- 366

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                               G +P   +   VL A + L  L+ G   H   ++ GL+ D
Sbjct: 367 --------------------GLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLD 406

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           +YV T L+D+Y K   L  A  +F++M  R+   WN++I+G    G    A  + +QM++
Sbjct: 407 VYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQ 466

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYR 685
           EEIKPD V++ SL++  S  G   +       M+   GI P    +T ++    +     
Sbjct: 467 EEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLD 526

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA-----YV 740
           E+ +F   +Q   IKP+S    +LL  C   G ++ GK    +  +N F  D      YV
Sbjct: 527 EAFEF---IQSMPIKPDSAVWGALLGACRIHGNVEMGK----VASQNLFELDPENVGYYV 579

Query: 741 ATGLIDMYSKSG---NLKSAREVFRKSANKTLASWNCMIMGFAI---YGNGKEAILLFHE 794
              + +MY+K G    + + R + R+   +    W+ M +  ++   Y   +      HE
Sbjct: 580 L--MSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHE 637

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEE 822
            ++ G          LLA  K++G V +
Sbjct: 638 EIQRGLH-------DLLAKMKSAGYVPD 658


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/808 (32%), Positives = 415/808 (51%), Gaps = 100/808 (12%)

Query: 334  ALMNFYGKC-RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  Y +C     +     +  ++L D + +N +I       +WE A+   R+M     
Sbjct: 105  ALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGR 164

Query: 393  KAISR-TIVKMLQACAKV---GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
              +S  T+V +L AC+ +        G++ H + LK                      L+
Sbjct: 165  HDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF-------------------LD 205

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP---DIITWNCLLS 505
                 F          +N+++S Y  LG VD A SLF +  ++   P   D++TWN ++S
Sbjct: 206  EGRERF---------PFNALLSMYARLGLVDDAQSLF-RTTAAAFSPGGGDVVTWNTMIS 255

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LD 564
                 G     + +L  M SLG RP+G + +  L A + L +L  GRE H  +L++  L 
Sbjct: 256  LLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLA 315

Query: 565  YDLYVGTSLMDMYVKNDCLQNAQEVFDNMK--NRNIVAWNSLISGYCFKGLFVNAKKMLN 622
             + +V ++L+DMY  N+ + +A+ VFD +   +R +  WN++I GY   G+   A ++ +
Sbjct: 316  ANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFS 375

Query: 623  QMEEEE--------------------------------IKPDLVS----WNSLVSGYSIW 646
            +ME E                                 +K  +       N+L+  Y+  
Sbjct: 376  RMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARL 435

Query: 647  GQSKEALVIIHHMKNSGIYP-NVVTWTSLISGSLQNENYRESLKFFIQMQ---------- 695
            G+   A  I      + I P +VV+W +LI+G +   +  E+ +   +MQ          
Sbjct: 436  GEMDVARRIF-----AMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSS 490

Query: 696  ------QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
                       PN+ T+ +LL  C  L     GKEIH   +++    D  V + L+DMY+
Sbjct: 491  TTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYA 550

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFT 808
            K G L ++R VF +   + + +WN +IM + ++G G EA+ LF E+   G   P+ +TF 
Sbjct: 551  KCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFI 610

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM-P 867
            A LAAC +SGLV+ G + F  M  D+ + PT + ++C+VD+LG+AG LDEA+  I +M P
Sbjct: 611  AALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEP 670

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
             +   + W +LLG+CR+H ++E  E+A+ RLF+LEP  +++Y L+ N+ + +  W+    
Sbjct: 671  GEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVA 730

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            +R  M   GV      SWI++D  +H F A  + HPA+ E++  +  L   M++ GY PD
Sbjct: 731  VRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPD 790

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSL 1047
            T CV  D+DE+EK  +L  H+EKLAI +GL++    A IRV KN RVC+DCH AAK+MS 
Sbjct: 791  TSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSK 850

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            + GR+I LRD  RFHHFR+G CSC D W
Sbjct: 851  MVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 205/450 (45%), Gaps = 32/450 (7%)

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH- 330
           GG   E +EV  ++   GV          L  C++L    LG E+HA ++K   D D+  
Sbjct: 260 GGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK---DADLAA 316

Query: 331 ---LKCALMNFYGKCRDVESANKLFSEVSDLEDDL-LWNEIIMVKLRNEKWENAIKLFRE 386
              +  AL++ Y     V SA ++F  V +    L +WN +I    +    E A++LF  
Sbjct: 317 NSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSR 376

Query: 387 MQFSSAKAISRTIVK-MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           M+  +  A S T +  +L ACA+   F   + +HGYV+K  +  N  V N L+ MY+R  
Sbjct: 377 MEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLG 436

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
           ++++A R+F  +   ++ SWN++I+     G+   A+ L  +M        + + +   S
Sbjct: 437 EMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQ-------LPSPSPSSS 489

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
                G     +            PN  ++  +L     L     G+E HGY +R+ L+ 
Sbjct: 490 STTEEGEAHRCM------------PNNITLMTLLPGCAALAAPARGKEIHGYAVRHALES 537

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           D+ VG++L+DMY K  CL  ++ VFD +  RN++ WN LI  Y   GL   A  + ++M 
Sbjct: 538 DIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMA 597

Query: 626 E-EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNEN 683
              E  P+ V++ + ++  S  G     L + H M ++ G+ P       ++    +   
Sbjct: 598 AGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGR 657

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             E+      M  E  +   +  SSLL  C
Sbjct: 658 LDEAYSIITSM--EPGEQQVSAWSSLLGAC 685



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 171/380 (45%), Gaps = 26/380 (6%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYF--S 255
           L   ++   L+  +  HA ++K   +  +  +  +L+  Y       SA + F +    S
Sbjct: 289 LPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPS 348

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGK-GVIFRSRILTIILKLCTKLMAFWLGV 314
           R    W++ +  Y   G + +E LE++  +  + G       ++ +L  C +   F    
Sbjct: 349 RQLGMWNAMICGYAQAGMD-EEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKE 407

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            +H  ++KRG   +  ++ ALM+ Y +  +++ A ++F+ + D  D + WN +I   +  
Sbjct: 408 AMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMI-DPRDVVSWNTLITGCVVQ 466

Query: 375 EKWENAIKLFREMQFSSAKAISR----------------TIVKMLQACAKVGAFHEGKQI 418
                A +L  EMQ  S    S                 T++ +L  CA + A   GK+I
Sbjct: 467 GHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEI 526

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           HGY ++ ALES+++V + L+ MY++   L  +  VFD +   N+ +WN +I +Y   G  
Sbjct: 527 HGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLG 586

Query: 479 DVAWSLFNKMNS-SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
           D A +LF++M +     P+ +T+   L+     G     L L  GM+    R +G   + 
Sbjct: 587 DEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGME----RDHGVKPTP 642

Query: 538 VLQAVTELRLLKYGRESHGY 557
            L A     L + GR    Y
Sbjct: 643 DLHACVVDVLGRAGRLDEAY 662


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/837 (30%), Positives = 428/837 (51%), Gaps = 74/837 (8%)

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHL 331
            G V E+L+ +      GV+  S  L+ +LK C  +    LG ++H   +K G D  +V  
Sbjct: 78   GMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSA 137

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
              +L++ Y KC  V    ++F  +   ++ + W  ++      +     + LF  M+   
Sbjct: 138  GTSLVDMYMKCGSVCEGIEVFEGMPK-KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEG 196

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                  T   +L A A  GA   G+++H   +K    S++ VCN L++MY++   +E A 
Sbjct: 197  IWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAK 256

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             VF+ M+  ++ SWN++++   GL   +         + SR             G  T  
Sbjct: 257  SVFNWMETRDMVSWNTLMA---GLQLNECELEALQLFHESRAT----------MGKMTQS 303

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
            +Y  V+ L                         L+ L   R+ H  +L++G      V T
Sbjct: 304  TYATVIKL----------------------CANLKQLALARQLHSCVLKHGFHLTGNVMT 341

Query: 572  SLMDMYVKNDCLQNAQEVFD-NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            +L D Y K   L +A  +F     +RN+V+W ++ISG    G    A  + ++M E+ + 
Sbjct: 342  ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVM 401

Query: 631  PDLVSWN-------------------------------SLVSGYSIWGQSKEALVIIHHM 659
            P+  +++                               +L++ YS +G +++AL I   +
Sbjct: 402  PNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMI 461

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL- 718
            +      +VV W++++S   Q  +   +   F +M  + IKPN  T+SS++  C      
Sbjct: 462  EQK----DVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAG 517

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            +  G++ H + +K  +     V++ L+ MYS+ GN+ SA+ VF +  ++ L SWN MI G
Sbjct: 518  VDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISG 577

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            +A +G   +AI  F ++  +G Q D +TF A++  C ++GLV EG +YFDSM  D+ I P
Sbjct: 578  YAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINP 637

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
            T+EHY+CMVDL  +AG LDE    IR MPF   A +W  LLG+CR+H ++E  + ++ +L
Sbjct: 638  TMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKL 697

Query: 899  FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
              LEP +S+ Y L+ N+ A + +W++ + +R  MD   VK     SWIQI   VH F A 
Sbjct: 698  LSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAF 757

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
               HP + +IY +L  +++ +K+ GY P+T  V  DI E++K  +L++H+E+LA+ +GL+
Sbjct: 758  DKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLI 817

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             T    P++++KN RVC DCH   K +S++  REI +RD +RFHHF  G CSC D W
Sbjct: 818  ATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 107/237 (45%), Gaps = 5/237 (2%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HAQ+IK     +   +  +L+  Y +FG    A   F +   +    WS+ L  +    G
Sbjct: 423 HAQVIKT-NYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQ-AG 480

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHLK 332
           + +    ++ ++  +G+      ++ ++  C    A    G + HA  IK  +   + + 
Sbjct: 481 DCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVS 540

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y +  +++SA  +F   +D  D + WN +I    ++     AI+ FR+M+ S  
Sbjct: 541 SALVSMYSRKGNIDSAQIVFERQTD-RDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLE 448
           +    T + ++  C   G   EG+Q    +++   +   +    C++ +YSR  KL+
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLD 656


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/728 (33%), Positives = 389/728 (53%), Gaps = 68/728 (9%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            A+  F  M  + A  + RT   +L+ CA  G    G+ +H  +    ++S       L +
Sbjct: 43   ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            MY++  +   A RVFD M                                      D + 
Sbjct: 103  MYAKCRRPADARRVFDRMPVR-----------------------------------DRVA 127

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            WN L++G+  +G  +  + ++  MQ   G RP+  ++  VL A    R L   RE+H + 
Sbjct: 128  WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            +R+GL+  + V T+++D Y K   ++ A+ VFD M  +N V+WN++I GY   G    A 
Sbjct: 188  IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV---------- 668
             + N+M EE +    VS  + +      G   E + +   +   G+  NV          
Sbjct: 248  ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307

Query: 669  ---------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                                 V+W ++I G  QN    ++++ F +MQ E++KP+S T+ 
Sbjct: 308  SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            S++     +      + IH   ++    +D YV T LIDMY+K G +  AR +F  +  +
Sbjct: 368  SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             + +WN MI G+  +G GK A+ LF E+   G  P+  TF ++L+AC ++GLV+EG +YF
Sbjct: 428  HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
             SM  DY + P +EHY  MVDLLG+AG LDEAW FI+ MP  P  +++GA+LG+C++H +
Sbjct: 488  TSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKN 547

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            +E AE +++++F+L P     + L+ N+ A ++ W+DV R+R +M++ G++    WS IQ
Sbjct: 548  VELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQ 607

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +   +H F +    H    EIY  L  L+ E+K +GYVPDT  ++ D++++ K ++L +H
Sbjct: 608  LKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIH-DVEDDVKAQLLNTH 666

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLAI +GL++T     I++ KN RVC+DCH A K +SLV GREI +RD  RFHHF++G
Sbjct: 667  SEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDG 726

Query: 1068 ECSCNDCW 1075
            +CSC D W
Sbjct: 727  KCSCGDYW 734



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 227/541 (41%), Gaps = 70/541 (12%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R  T +LKLC        G  VHA L  RG D +     AL N Y KCR    A ++F  
Sbjct: 60  RTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDR 119

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFH 413
           +  + D + WN ++    RN     A+++   MQ     +  S T+V +L ACA   A  
Sbjct: 120 MP-VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALA 178

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
             ++ H + ++S LE  ++V   ++  Y +   +  A  VFD M   N  SWN+MI  Y 
Sbjct: 179 ACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYA 238

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G    A +LFN+M                                      G      
Sbjct: 239 QNGDSREALALFNRMVEE-----------------------------------GVDVTDV 263

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           SV   LQA  EL  L  G   H  ++R GLD ++ V  +L+ MY K   +  A  VFD +
Sbjct: 264 SVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL 323

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------------ 641
             R  V+WN++I G    G   +A ++  +M+ E +KPD  +  S++             
Sbjct: 324 DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR 383

Query: 642 ---GYSIWGQSKE------ALV----------IIHHMKNSGIYPNVVTWTSLISGSLQNE 682
              GYSI     +      AL+          I   + NS    +V+TW ++I G   + 
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHG 443

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
             + +++ F +M+   I PN TT  S+L  C   GL+  G+E      ++  ++      
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHY 503

Query: 743 G-LIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
           G ++D+  ++G L  A    +K   +  L+ +  M+    ++ N + A     ++ E G 
Sbjct: 504 GTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGP 563

Query: 801 Q 801
           Q
Sbjct: 564 Q 564



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 228 DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           ++  +++  Y + GD  +A   F    +++   W++ ++ Y    G+ +E L ++  +  
Sbjct: 197 NVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ-NGDSREALALFNRMVE 255

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +GV      +   L+ C +L     G+ VH  L++ G D +V +  AL+  Y KC+ V+ 
Sbjct: 256 EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDL 315

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A+ +F E+ D    + WN +I+   +N   E+A++LF  MQ  + K  S T+V ++ A A
Sbjct: 316 ASHVFDEL-DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALA 374

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +    + + IHGY ++  L+ ++ V   LI MY++  ++ +A  +F+S ++ ++ +WN+
Sbjct: 375 DISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNA 434

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           MI  Y   G+   A  LF +M S  I P+  T+  +LS 
Sbjct: 435 MIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 269/875 (30%), Positives = 431/875 (49%), Gaps = 70/875 (8%)

Query: 226  SDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
            SD  V + I H Y  +G  + + K F     R+   W+S +  Y S  GE +E+++++  
Sbjct: 75   SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY-SDKGEPEEVIDIYKG 133

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
            + G+GV      +++++  C  L    LG ++   ++K G +  + ++ +L++  G   +
Sbjct: 134  MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 193

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            V+ AN +F ++S+  D + WN I     +N   E + ++F  M+    +  S T+  +L 
Sbjct: 194  VDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 252

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
                V     G+ IHG V+K   +S + VCN L+ MY+   +   A  VF  M       
Sbjct: 253  VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP------ 306

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                                           D+I+WN L++     G   + L LL  M 
Sbjct: 307  -----------------------------TKDLISWNSLMASFVNDGRSLDALGLLCSMI 337

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            S G   N  + +  L A       + GR  HG ++ +GL Y+  +G +L+ MY K   + 
Sbjct: 338  SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
             ++ V   M  R++VAWN+LI GY        A      M  E +  + ++  S++S   
Sbjct: 398  ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457

Query: 645  IWGQSKEALVIIH------------HMKNSGIY--------------------PNVVTWT 672
            + G   E    +H            H+KNS I                      N++TW 
Sbjct: 458  LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 517

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            ++++ +  + +  E LK   +M+   +  +  + S  L     L +L+ G+++H L +K 
Sbjct: 518  AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 577

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF  D+++     DMYSK G +    ++   S N++L SWN +I     +G  +E    F
Sbjct: 578  GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 637

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            HE+LE G +P  +TF +LL AC + GLV++G  Y+D ++ D+ + P IEH  C++DLLG+
Sbjct: 638  HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 697

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            +G L EA  FI  MP KP+  +W +LL SC+IHG+L+    A+  L KLEP + + Y L 
Sbjct: 698  SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 757

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + RWEDVE +R  M    +K     SW+++   V  F      HP T EIY +L
Sbjct: 758  SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 817

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              +   +K+ GYV DT    QD DEE+K   L +H+E+LA+ Y LM T   + +R+ KN 
Sbjct: 818  EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 877

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            R+CSDCH+  K++S V GR I LRD  RFHHF  G
Sbjct: 878  RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 176/725 (24%), Positives = 326/725 (44%), Gaps = 118/725 (16%)

Query: 277 ELLEVWGELHGKGVIFRSRILTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHLKCAL 335
           E +E + ++   G+   S ++  ++  C +  + F  GV+VH  + K G   DV++  A+
Sbjct: 24  EGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAI 83

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
           ++ YG    V  + K+F E+ D  + + W  +++      + E  I +++ M+       
Sbjct: 84  LHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 142

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
             ++  ++ +C  +     G+QI G V+KS LES L+V N LISM      ++ A  +FD
Sbjct: 143 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 202

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            M + +  SWNS+ ++Y   G+++ ++ +F+ M   R   ++                  
Sbjct: 203 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR--RFHDEV------------------ 242

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
                          N ++VS +L  +  +   K+GR  HG +++ G D  + V  +L+ 
Sbjct: 243 ---------------NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 287

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM----------- 624
           MY        A  VF  M  +++++WNSL++ +   G  ++A  +L  M           
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 347

Query: 625 --------------EEEEIKPDLVS----------WNSLVSGYSIWGQSKEALVIIHHMK 660
                         E+  I   LV            N+LVS Y   G+  E+  ++  M 
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG-LL 719
                 +VV W +LI G  ++E+  ++L  F  M+ E +  N  T+ S+L  C   G LL
Sbjct: 408 RR----DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
           + GK +H   +  GF  D +V   LI MY+K G+L S++++F    N+ + +WN M+   
Sbjct: 464 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 523

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY------------- 826
           A +G+G+E + L  ++   G   D  +F+  L+A     ++EEG +              
Sbjct: 524 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 583

Query: 827 --FDSMSTDYN----------IIP-----TIEHYSCMVDLLGKAGYLDE---AWDFIRTM 866
             F++ +  Y+          ++P     ++  ++ ++  LG+ GY +E    +  +  M
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 643

Query: 867 PFKPDATIWGALLGSCRIHG-----HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
             KP    + +LL +C  HG      L Y ++ +R  F LEP    +   +++LL  S R
Sbjct: 644 GIKPGHVTFVSLLTACS-HGGLVDKGLAYYDMIARD-FGLEPA-IEHCICVIDLLGRSGR 700

Query: 922 WEDVE 926
             + E
Sbjct: 701 LAEAE 705



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/568 (22%), Positives = 241/568 (42%), Gaps = 76/568 (13%)

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGK 416
           + +++ WN ++   +R   +   ++ FR+M     K  S  I  ++ AC + G+ F EG 
Sbjct: 3   VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 62

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+HG+V KS L S++ V   ++ +Y     +  + +VF+ M D N+ SW S++     +G
Sbjct: 63  QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM-----VG 117

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
           Y D                               G  + V+ + +GM+  G   N +S+S
Sbjct: 118 YSD------------------------------KGEPEEVIDIYKGMRGEGVGCNENSMS 147

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
           +V+ +   L+    GR+  G ++++GL+  L V  SL+ M      +  A  +FD M  R
Sbjct: 148 LVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER 207

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEE--EEIKPDLVS-------------W----- 636
           + ++WNS+ + Y   G    + ++ + M    +E+    VS             W     
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267

Query: 637 ---------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                          N+L+  Y+  G+S EA ++   M       ++++W SL++  + +
Sbjct: 268 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK----DLISWNSLMASFVND 323

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
               ++L     M       N  T +S L  C      + G+ +H L + +G   +  + 
Sbjct: 324 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 383

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             L+ MY K G +  +R V  +   + + +WN +I G+A   +  +A+  F  +   G  
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            + IT  ++L+AC   G + E  K   +              + ++ +  K G L  + D
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503

Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLE 889
               +  + +   W A+L +   HGH E
Sbjct: 504 LFNGLDNR-NIITWNAMLAANAHHGHGE 530



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 199/460 (43%), Gaps = 77/460 (16%)

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
           M   N  SWN+M+S     G V V                              G Y   
Sbjct: 1   MPVRNEVSWNTMMS-----GIVRV------------------------------GLYLEG 25

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTEL-RLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
           +   R M  LG +P+   ++ ++ A      + + G + HG++ ++GL  D+YV T+++ 
Sbjct: 26  MEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILH 85

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG----------------------- 612
           +Y     +  +++VF+ M +RN+V+W SL+ GY  KG                       
Sbjct: 86  LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145

Query: 613 --LFVNA----------KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
             L +++          ++++ Q+ +  ++  L   NSL+S     G    A  I   M 
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 205

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                 + ++W S+ +   QN +  ES + F  M++   + NSTT+S+LL   G +   +
Sbjct: 206 ER----DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 261

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
            G+ IH L +K GF     V   L+ MY+ +G    A  VF++   K L SWN ++  F 
Sbjct: 262 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 321

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
             G   +A+ L   ++ +G   + +TFT+ LAAC      E+G +    +     +    
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQ 380

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
              + +V + GK G + E+   +  MP + D   W AL+G
Sbjct: 381 IIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 419


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/787 (30%), Positives = 412/787 (52%), Gaps = 68/787 (8%)

Query: 320  LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            +IK G   D HL  +L+N Y KC  ++ A ++  E+  ++D   WN+ +         + 
Sbjct: 15   VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMP-IQDVQQWNQKLSSANSPYPLQE 73

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            A++LF  M+ +  +        ++ A A +G  H G+ IH  V K   ES++ + N  ++
Sbjct: 74   AVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            MY +   +E   + F +M   NL+S N+++S +      D            RI   ++ 
Sbjct: 134  MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCD---------QGPRILIQLLV 184

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
                                       GF PN  +   +L+       L  G+  HG ++
Sbjct: 185  E--------------------------GFEPNMYTFISILKTCASKGDLNEGKAIHGQVI 218

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            ++G++ D ++  SL+++Y K      A +VF  +  R++V+W +LI+G+  +G + +  +
Sbjct: 219  KSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLR 277

Query: 620  MLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMK-------------- 660
            + NQM  E   P++ ++ S++   S       G+   A ++ + +               
Sbjct: 278  IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 337

Query: 661  ------------NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                        N  I  ++  WT +++G  Q+    +++K FIQMQ+E +KPN  T++S
Sbjct: 338  KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 397

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
             L  C  +  L +G+++H + +K G   D +VA+ L+DMY+K G ++ A  VF    ++ 
Sbjct: 398  SLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRD 457

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
              SWN +I G++ +G G +A+  F  +L+ G  PD +TF  +L+AC + GL+EEG K+F+
Sbjct: 458  TVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFN 517

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            S+S  Y I PTIEHY+CMVD+LG+AG   E   FI  M    +  IW  +LG+C++HG++
Sbjct: 518  SLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNI 577

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
            E+ E A+ +LF+LEP   +NY L+ N+ A    W+DV  +R  M   GVK     SW+++
Sbjct: 578  EFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEV 637

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
            +  VHVF +    HP   EI+ +L  L  ++  +GY P+T  V  ++ + EK ++L  H+
Sbjct: 638  NGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHS 697

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            E+LA+ + L+ T +R  IR+ KN R+C DCH   K +S +  +E+ +RD   FHHF+ G 
Sbjct: 698  ERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGS 757

Query: 1069 CSCNDCW 1075
            CSC + W
Sbjct: 758  CSCQNFW 764



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 239/539 (44%), Gaps = 78/539 (14%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA + K GF+ D+ +  A +  Y K + VE+  + F  +  +E+    N ++    
Sbjct: 109 GESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMM-IENLASRNNLLSGFC 167

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
             E  +   ++  ++     +    T + +L+ CA  G  +EGK IHG V+KS +  +  
Sbjct: 168 DTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSH 227

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           + N L+++Y++      A +VF  + + ++ SW ++I+ +   GY      +FN+M +  
Sbjct: 228 LWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAE- 285

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                                             GF PN  +   +L++ + L  +  G+
Sbjct: 286 ----------------------------------GFNPNMYTFISILRSCSSLSDVDLGK 311

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + H  I++N LD + +VGT+L+DMY KN  L++A+ +F+ +  R++ AW  +++GY   G
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS----------------IWGQSKEALV-- 654
               A K   QM+ E +KP+  +  S +SG S                  GQS +  V  
Sbjct: 372 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVAS 431

Query: 655 -IIHHMKNSG------------IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            ++      G            +  + V+W ++I G  Q+    ++LK F  M  E   P
Sbjct: 432 ALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVP 491

Query: 702 NSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGN---LKSA 757
           +  T   +L  C  +GL++ GK+  + L    G          ++D+  ++G    ++S 
Sbjct: 492 DEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESF 551

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGN---GKEAILLFHELLETGFQPDAITFTALLAA 813
            E  + ++N  +  W  ++    ++GN   G+ A +   E LE     + I  + + AA
Sbjct: 552 IEEMKLTSNVLI--WETVLGACKMHGNIEFGERAAMKLFE-LEPEIDSNYILLSNMFAA 607



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 192/425 (45%), Gaps = 41/425 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ILK C        G  +H  +IK G + D HL  +L+N Y KC     A K+F E+ +  
Sbjct: 197 ILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE-R 255

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + W  +I      E + + +++F +M          T + +L++C+ +     GKQ+H
Sbjct: 256 DVVSWTALI-TGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 314

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             ++K++L+ N  V   L+ MY++N  LE A  +F+ +   +L +W  +++ Y   G  +
Sbjct: 315 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 374

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A   F +M    ++P+  T    LSG                                 
Sbjct: 375 KAVKCFIQMQREGVKPNEFTLASSLSG--------------------------------- 401

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
              + +  L  GR+ H   ++ G   D++V ++L+DMY K  C+++A+ VFD + +R+ V
Sbjct: 402 --CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 459

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +WN++I GY   G    A K    M +E   PD V++  ++S  S  G  +E     + +
Sbjct: 460 SWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSL 519

Query: 660 -KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            K  GI P +  +  ++    +   + E   F  +M+   +  N     ++L  C   G 
Sbjct: 520 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK---LTSNVLIWETVLGACKMHGN 576

Query: 719 LQNGK 723
           ++ G+
Sbjct: 577 IEFGE 581



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 142/308 (46%), Gaps = 20/308 (6%)

Query: 207 LSSVKSKHAQMIKMG-----KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADW 261
           L+  K+ H Q+IK G      +WNS      L+  Y + G    A K F     R    W
Sbjct: 207 LNEGKAIHGQVIKSGINPDSHLWNS------LVNVYAKCGSANYACKVFGEIPERDVVSW 260

Query: 262 SSFLEDY--ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHAS 319
           ++ +  +  E +G      L ++ ++  +G          IL+ C+ L    LG +VHA 
Sbjct: 261 TALITGFVAEGYGSG----LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQ 316

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWE 378
           ++K   D +  +  AL++ Y K R +E A  +F+ +  ++ DL  W  I+    ++ + E
Sbjct: 317 IVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL--IKRDLFAWTVIVAGYAQDGQGE 374

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A+K F +MQ    K    T+   L  C+++     G+Q+H   +K+    ++ V + L+
Sbjct: 375 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 434

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY++   +E A  VFD +   +  SWN++I  Y+  G    A   F  M      PD +
Sbjct: 435 DMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEV 494

Query: 499 TWNCLLSG 506
           T+  +LS 
Sbjct: 495 TFIGVLSA 502



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 6/262 (2%)

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
           KK++ ++ +  I PD   W+SLV+ Y      + A  ++  M       +V  W   +S 
Sbjct: 9   KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMP----IQDVQQWNQKLSS 64

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
           +      +E+++ F  M+   I+ N    +SL+     LG    G+ IH    K GF  D
Sbjct: 65  ANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESD 124

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             ++   + MY K+ ++++  + F+    + LAS N ++ GF       +   +  +LL 
Sbjct: 125 ILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLV 184

Query: 798 TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
            GF+P+  TF ++L  C + G + EG K          I P    ++ +V++  K G  +
Sbjct: 185 EGFEPNMYTFISILKTCASKGDLNEG-KAIHGQVIKSGINPDSHLWNSLVNVYAKCGSAN 243

Query: 858 EAWDFIRTMPFKPDATIWGALL 879
            A      +P + D   W AL+
Sbjct: 244 YACKVFGEIP-ERDVVSWTALI 264



 Score = 43.1 bits (100), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 1/160 (0%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           K+I    +KNG   D+++ + L+++Y K  +L+ AR+V  +   + +  WN  +      
Sbjct: 9   KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
              +EA+ LF+ +  T  + +   F +L++A  + G    G +   +    Y     I  
Sbjct: 69  YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYG-ESIHACVCKYGFESDILI 127

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            +  V +  K   ++  W F + M  +  A+    L G C
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFC 167


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 801

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/746 (31%), Positives = 390/746 (52%), Gaps = 76/746 (10%)

Query: 367  IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
            +I   ++N    +A K++  M+ +  +  +  I  +L+AC  + +F  G+++HG+V+K+ 
Sbjct: 95   LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 427  LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
               ++ VCN LI MYS                                +G + +A  LF+
Sbjct: 155  FHGDVFVCNALIMMYSE-------------------------------VGSLALARLLFD 183

Query: 487  KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            K+ +     D+++W+ ++  +   G     L LLR M  +  +P+   +  +   + EL 
Sbjct: 184  KIENK----DVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELA 239

Query: 547  LLKYGRESHGYILRNGL--DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             LK G+  H Y++RNG      + + T+L+DMYVK + L  A+ VFD +   +I++W ++
Sbjct: 240  DLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAM 299

Query: 605  ISGYCF----------------KGLFVNAKKMLNQMEE-------------------EEI 629
            I+ Y                  +G+F N   ML+ ++E                      
Sbjct: 300  IAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGF 359

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
               LV   + +  Y   G  + A  +    K+     +++ W+++IS   QN    E+  
Sbjct: 360  TLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK----DLMMWSAMISSYAQNNCIDEAFD 415

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F+ M    I+PN  TM SLL  C   G L+ GK IH    K G   D  + T  +DMY+
Sbjct: 416  IFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYA 475

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
              G++ +A  +F ++ ++ ++ WN MI GFA++G+G+ A+ LF E+   G  P+ ITF  
Sbjct: 476  NCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIG 535

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
             L AC +SGL++EG + F  M  ++   P +EHY CMVDLLG+AG LDEA + I++MP +
Sbjct: 536  ALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR 595

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            P+  ++G+ L +C++H +++  E A+++   LEP  S    LM N+ A +NRW DV  +R
Sbjct: 596  PNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIR 655

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
             +M + G+      S I+++ ++H F      HP   ++Y  +  +  +++  GY PD  
Sbjct: 656  RAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVS 715

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
            CV  +ID+E+K   L  H+EKLA+ YGL+ T    PIR++KN RVC DCH A K +S + 
Sbjct: 716  CVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIY 775

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
            GREI +RD  RFHHF+EG CSC D W
Sbjct: 776  GREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 231/521 (44%), Gaps = 78/521 (14%)

Query: 280 EVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY 339
           +++  + G      + ++  +LK C  + +F LG EVH  ++K GF  DV +  AL+  Y
Sbjct: 110 KIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMY 169

Query: 340 GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
            +   +  A  LF ++ + +D + W+ +I    R+   + A+ L R+M     K     +
Sbjct: 170 SEVGSLALARLLFDKIEN-KDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGM 228

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSAL--ESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           + +    A++     GK +H YV+++    +S + +C  LI MY +   L  A RVFD +
Sbjct: 229 ISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGL 288

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              ++ SW +MI++Y     ++    LF KM    + P+ IT                +L
Sbjct: 289 SKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEIT----------------ML 332

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
           +L++   + G                    L+ G+  H + LRNG    L + T+ +DMY
Sbjct: 333 SLVKECGTAG-------------------ALELGKLLHAFTLRNGFTLSLVLATAFIDMY 373

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGY----CFK------------GLFVNAKKML 621
            K   +++A+ VFD+ K+++++ W+++IS Y    C              G+  N + M+
Sbjct: 374 GKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMV 433

Query: 622 NQM-------------------EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
           + +                   +++ IK D++   S V  Y+  G    A    H +   
Sbjct: 434 SLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTA----HRLFAE 489

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               ++  W ++ISG   + +   +L+ F +M+   + PN  T    L  C   GLLQ G
Sbjct: 490 ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEG 549

Query: 723 KEI-HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
           K + H +  + GF         ++D+  ++G L  A E+ +
Sbjct: 550 KRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIK 590



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 157/345 (45%), Gaps = 4/345 (1%)

Query: 211 KSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K+ HA +++ GK   S   +  +LI  Y++  +   A + F      S   W++ +  Y 
Sbjct: 245 KAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAY- 303

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
                + E + ++ ++ G+G+      +  ++K C    A  LG  +HA  ++ GF   +
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            L  A ++ YGKC DV SA  +F      +D ++W+ +I    +N   + A  +F  M  
Sbjct: 364 VLATAFIDMYGKCGDVRSARSVFDSFKS-KDLMMWSAMISSYAQNNCIDEAFDIFVHMTG 422

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              +   RT+V +L  CAK G+   GK IH Y+ K  ++ ++ +    + MY+    ++ 
Sbjct: 423 CGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDT 482

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A R+F    D ++S WN+MIS +   G+ + A  LF +M +  + P+ IT+   L     
Sbjct: 483 AHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSH 542

Query: 510 HGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            G  Q    L   M    GF P       ++  +    LL    E
Sbjct: 543 SGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHE 587



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%)

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           N    + LI+  ++N    ++ K +  M+  D + ++  + S+L+ C  +     G+E+H
Sbjct: 88  NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
              +KNGF  D +V   LI MYS+ G+L  AR +F K  NK + SW+ MI  +   G   
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207

Query: 787 EAILLFHELLETGFQPDAITFTAL 810
           EA+ L  ++     +P  I   ++
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISI 231


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa
            Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/728 (33%), Positives = 389/728 (53%), Gaps = 68/728 (9%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            A+  F  M  + A  + RT   +L+ CA  G    G+ +H  +    ++S       L +
Sbjct: 43   ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            MY++  +   A RVFD M                                      D + 
Sbjct: 103  MYAKCRRPADARRVFDRMPVR-----------------------------------DRVA 127

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            WN L++G+  +G  +  + ++  MQ   G RP+  ++  VL A    R L   RE+H + 
Sbjct: 128  WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            +R+GL+  + V T+++D Y K   ++ A+ VFD M  +N V+WN++I GY   G    A 
Sbjct: 188  IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV---------- 668
             + N+M EE +    VS  + +      G   E + +   +   G+  NV          
Sbjct: 248  ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMY 307

Query: 669  ---------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                                 V+W ++I G  QN    ++++ F +MQ E++KP+S T+ 
Sbjct: 308  SKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLV 367

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            S++     +      + IH   ++    +D YV T LIDMY+K G +  AR +F  +  +
Sbjct: 368  SVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER 427

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             + +WN MI G+  +G GK A+ LF E+   G  P+  TF ++L+AC ++GLV+EG +YF
Sbjct: 428  HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
             SM  DY + P +EHY  MVDLLG+AG LDEAW FI+ MP  P  +++GA+LG+C++H +
Sbjct: 488  TSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKN 547

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            +E AE +++++F+L P     + L+ N+ A ++ W+DV R+R +M++ G++    WS IQ
Sbjct: 548  VELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQ 607

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +   +H F +    H    EIY  L  L+ E+K +GYVPDT  ++ D++++ K ++L +H
Sbjct: 608  LKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIH-DVEDDVKAQLLNTH 666

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLAI +GL++T     I++ KN RVC+DCH A K +SLV GREI +RD  RFHHF++G
Sbjct: 667  SEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDG 726

Query: 1068 ECSCNDCW 1075
            +CSC D W
Sbjct: 727  KCSCGDYW 734



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 227/541 (41%), Gaps = 70/541 (12%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R  T +LKLC        G  VHA L  RG D +     AL N Y KCR    A ++F  
Sbjct: 60  RTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDR 119

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFH 413
           +  + D + WN ++    RN     A+++   MQ     +  S T+V +L ACA   A  
Sbjct: 120 MP-VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALA 178

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
             ++ H + ++S LE  ++V   ++  Y +   +  A  VFD M   N  SWN+MI  Y 
Sbjct: 179 ACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYA 238

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G    A +LFN+M                                      G      
Sbjct: 239 QNGDSREALALFNRMVEE-----------------------------------GVDVTDV 263

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           SV   LQA  EL  L  G   H  ++R GLD ++ V  +L+ MY K   +  A  VFD +
Sbjct: 264 SVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL 323

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------------ 641
             R  V+WN++I G    G   +A ++  +M+ E +KPD  +  S++             
Sbjct: 324 DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR 383

Query: 642 ---GYSIWGQSKE------ALV----------IIHHMKNSGIYPNVVTWTSLISGSLQNE 682
              GYSI     +      AL+          I   + NS    +V+TW ++I G   + 
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHG 443

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
             + +++ F +M+   I PN TT  S+L  C   GL+  G+E      ++  ++      
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHY 503

Query: 743 G-LIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
           G ++D+  ++G L  A    +K   +  L+ +  M+    ++ N + A     ++ E G 
Sbjct: 504 GTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGP 563

Query: 801 Q 801
           Q
Sbjct: 564 Q 564



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 148/279 (53%), Gaps = 2/279 (0%)

Query: 228 DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           ++  +++  Y + GD  +A   F    +++   W++ ++ Y    G+ +E L ++  +  
Sbjct: 197 NVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQ-NGDSREALALFNRMVE 255

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +GV      +   L+ C +L     G+ VH  L++ G D +V +  AL+  Y KC+ V+ 
Sbjct: 256 EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDL 315

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A+ +F E+ D    + WN +I+   +N   E+A++LF  MQ  + K  S T+V ++ A A
Sbjct: 316 ASHVFDEL-DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALA 374

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +    + + IHGY ++  L+ ++ V   LI MY++  ++ +A  +F+S ++ ++ +WN+
Sbjct: 375 DISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNA 434

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           MI  Y   G+   A  LF +M S  I P+  T+  +LS 
Sbjct: 435 MIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/736 (33%), Positives = 388/736 (52%), Gaps = 67/736 (9%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            L+ C +     + K++H  ++++       + N LI+ Y +   L+ A  VFD +   NL
Sbjct: 12   LKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNL 71

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
             SWN+++S+Y+ LGY+     +F+ M +     D+++WN LLSG+  +G     + +   
Sbjct: 72   FSWNTLLSAYSKLGYLQDMQRVFDSMPNH----DVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 523  MQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK-- 579
            M   G    N  + S +L   +    +  GR+ HG I + G    L+VG+ L+DMY K  
Sbjct: 128  MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 580  --NDC---------------------------LQNAQEVFDNMKNRNIVAWNSLISGYCF 610
              ND                            +  A+++FDNM  ++ ++W ++I+G   
Sbjct: 188  FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---GYSIWGQSKEA-LVIIHHMKNSGIY- 665
             GLF  A     +M  E    D  ++ S+++   G+    + K+    II       I+ 
Sbjct: 248  NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307

Query: 666  --------------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
                                       NV++WT+++ G  QN    E+++ F  MQ+ +I
Sbjct: 308  GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
             P+  T+ S++ +C  L  L+ G + H   L +G I    V+  LI +Y K G+L+ A +
Sbjct: 368  HPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQ 427

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            +F +   +   SW  ++ G+A +G   E I LF  +L  G  PD +TF  +L+AC  +GL
Sbjct: 428  LFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGL 487

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            VE+G+ YF+ M  ++ I P  +HY+CM+DLL +AG L+EA +FI  MPF PDA  W  LL
Sbjct: 488  VEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLL 547

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             SCR++G+LE  + A+  L KLEP N A+Y L+ ++ A   +W+DV +LR  M E+GVK 
Sbjct: 548  SSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKK 607

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
                SWI+    VH+FSA+    P + +IY +L  L  +M + GYVPD   V  D+++ E
Sbjct: 608  EPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSE 667

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K K+L  H+EKLAI +GL+       IRV+KN RVC DCH A KY+S +  REI +RD  
Sbjct: 668  KIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAV 727

Query: 1060 RFHHFREGECSCNDCW 1075
            RFH F++G CSC D W
Sbjct: 728  RFHLFKDGVCSCGDFW 743



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/599 (22%), Positives = 251/599 (41%), Gaps = 113/599 (18%)

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           S   T  LK C +        ++H  +I+   + +  L   L+N YGK  D+++A  +F 
Sbjct: 5   SNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFD 64

Query: 354 EV---------------------SDLE---------DDLLWNEIIMVKLRNEKWENAIKL 383
            +                      D++         D + WN ++     N     ++++
Sbjct: 65  HIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRV 124

Query: 384 FREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           +  M    +  ++R T   ML   +  G    G+QIHG + K   +S L V + L+ MY+
Sbjct: 125 YNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYA 184

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +   +  A R+F+ + + N+  +N+MI+      ++  A  LF+ M     + D I+W  
Sbjct: 185 KTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMP----EKDSISWTT 240

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           +++G   +G ++  +   + M   GF  +  +   VL A      L  G++ H YI+R  
Sbjct: 241 IITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTD 300

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
              +++VG++L+DMY K   ++ A+ VF  M+++N+++W +++ GY   G    A ++  
Sbjct: 301 YQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFC 360

Query: 623 QMEEEEIKPD-----------------------------------LVSWNSLVSGYSIWG 647
            M+  EI PD                                   +   N+L++ Y   G
Sbjct: 361 DMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCG 420

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             + A  + H MK      + V+WT+L+SG  Q     E++  F  M    I P+  T  
Sbjct: 421 SLEHAHQLFHEMK----IRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFV 476

Query: 708 SLLQTCGGLGLLQNGKE-IHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            +L  C   GL++ G     C+  ++    I D Y  T +ID+ S++G L+ A+      
Sbjct: 477 GVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHY--TCMIDLLSRAGRLEEAKNFIN-- 532

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
                                           +  F PDAI +  LL++C+ +G +E G
Sbjct: 533 --------------------------------QMPFSPDAIGWATLLSSCRLNGNLEIG 559



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 121/234 (51%), Gaps = 1/234 (0%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  +E ++ + E+  +G          +L  C   +A   G ++HA +I+  +  ++ + 
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG 308

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KCR+V+ A  +F ++   ++ + W  +++   +N   E A+++F +MQ +  
Sbjct: 309 SALLDMYCKCRNVKYAEAVFRKMRH-KNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                T+  ++ +CA + +  EG Q HG  L S L   ++V N LI++Y +   LE A +
Sbjct: 368 HPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQ 427

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +F  MK  +  SW +++S Y   G  +   SLF  M +  I PD +T+  +LS 
Sbjct: 428 LFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSA 481


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15930-like [Glycine max]
          Length = 712

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/765 (33%), Positives = 403/765 (52%), Gaps = 81/765 (10%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS-EVSDLEDD---LLWNEIIMV 370
            ++H+  IK G   D   +  ++ F   C   ES   +++ +V D        +WN +I  
Sbjct: 25   QIHSHTIKMGLSSDPLFQKRVIAF---CCAHESGKMIYARQVFDAIPQPTLFIWNTMIKG 81

Query: 371  KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
              R    +N + ++  M  S+ K    T   +L+   +  A   GK +  + +K   +SN
Sbjct: 82   YSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSN 141

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
            L V    I M+S    ++LA +VFD M D                     AW        
Sbjct: 142  LFVQKAFIHMFSLCRLVDLARKVFD-MGD---------------------AW-------- 171

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                 +++TWN +LSG+     ++    L   M+  G  PN  ++ ++L A ++L+ L+ 
Sbjct: 172  -----EVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEG 226

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            G+  + YI    ++ +L +   L+DM+     +  AQ VFDNMKNR              
Sbjct: 227  GKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNR-------------- 272

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                                 D++SW S+V+G++  GQ   A      +       + V+
Sbjct: 273  ---------------------DVISWTSIVTGFANIGQIDLARKYFDQIPER----DYVS 307

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            WT++I G L+   + E+L  F +MQ  ++KP+  TM S+L  C  LG L+ G+ +     
Sbjct: 308  WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYID 367

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            KN    D +V   LIDMY K GN+  A++VF++  +K   +W  MI+G AI G+G+EA+ 
Sbjct: 368  KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALA 427

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            +F  ++E    PD IT+  +L AC ++G+VE+G  +F SM+  + I P + HY CMVDLL
Sbjct: 428  MFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLL 487

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG L+EA + I  MP KP++ +WG+LLG+CR+H +++ AE+A++++ +LEP N A Y 
Sbjct: 488  GRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYV 547

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A   RWE++ ++R  M E G+K     S ++++  V+ F A    HP + EIY 
Sbjct: 548  LLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYA 607

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            +L +++ ++ K GY PDT  V+ D+ EE+K   L  H+EKLAI Y L+ +     IR++K
Sbjct: 608  KLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVK 667

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R+C DCH  AK +S    RE+ +RD  RFHHFR G CSCN+ W
Sbjct: 668  NLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 247/519 (47%), Gaps = 23/519 (4%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYL---EFGDFTSAAKAFFLYFSRSYA 259
           K + +  +K  H+  IKMG   +SD + +  +  +    E G    A + F      +  
Sbjct: 16  KCKSMYQLKQIHSHTIKMG--LSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLF 73

Query: 260 DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHAS 319
            W++ ++ Y       Q  + ++  +    +         +LK  T+ MA   G  +   
Sbjct: 74  IWNTMIKGYSRIN-HPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNH 132

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            +K GFD ++ ++ A ++ +  CR V+ A K+F ++ D  + + WN ++    R ++++ 
Sbjct: 133 AVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVF-DMGDAWEVVTWNIMLSGYNRVKQFKK 191

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           +  LF EM+       S T+V ML AC+K+     GK I+ Y+    +E NL + N LI 
Sbjct: 192 SKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLID 251

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           M++   +++ A  VFD+MK+ ++ SW S+++ +  +G +D+A   F+++     + D ++
Sbjct: 252 MFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIP----ERDYVS 307

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           W  ++ G+     +   L L R MQ    +P+  ++  +L A   L  L+ G     YI 
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYID 367

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           +N +  D +VG +L+DMY K   +  A++VF  M +++   W ++I G    G    A  
Sbjct: 368 KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALA 427

Query: 620 MLNQMEEEEIKPDLVSWNSLV-----SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
           M + M E  I PD +++  ++     +G    GQS    + + H    GI PNV  +  +
Sbjct: 428 MFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQH----GIKPNVTHYGCM 483

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +    +     E+ +  + M    +KPNS    SLL  C
Sbjct: 484 VDLLGRAGRLEEAHEVIVNMP---VKPNSIVWGSLLGAC 519



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM--YSKSGNLKSAREVFRKSA 765
           SLL+ C  +  L   K+IH   +K G   D      +I      +SG +  AR+VF    
Sbjct: 12  SLLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
             TL  WN MI G++   + +  + ++  +L +  +PD  TF  LL
Sbjct: 69  QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Glycine max]
          Length = 975

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 269/818 (32%), Positives = 408/818 (49%), Gaps = 79/818 (9%)

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            L  + K C  +    LG  VHA  +K G   D  +  AL+  YGKC  VESA K+F  + 
Sbjct: 198  LPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMR 257

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS---RTIVKMLQACAKVGAFH 413
            +  + + WN ++     N  +     +F+ +  S  + +     T+V ++ ACA VG   
Sbjct: 258  N-RNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVR 316

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
             G  +HG   K  +   ++V N L+ MYS+                              
Sbjct: 317  MGMVVHGLAFKLGITEEVTVNNSLVDMYSK------------------------------ 346

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNG 532
              GY+  A +LF+ MN  +   ++++WN ++ G+   G ++ V  LL+ MQ     R N 
Sbjct: 347  -CGYLGEARALFD-MNGGK---NVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNE 401

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             +V  VL A +    L   +E HGY  R+G   D  V  + +  Y K   L  A+ VF  
Sbjct: 402  VTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCG 461

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL------------- 639
            M+ + + +WN+LI  +   G    +  +   M +  + PD  +  SL             
Sbjct: 462  MEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCG 521

Query: 640  -------------------VSGYSIWGQSKEALV---IIHHMKNSGIYPNVVTWTSLISG 677
                               +S  S++ Q    L+   I   M+N     ++V W  +I+G
Sbjct: 522  KEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENK----SLVCWNVMITG 577

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              QNE   E+L  F QM    IKP    ++ +L  C  +  L+ GKE+H   LK    +D
Sbjct: 578  FSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSED 637

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            A+V   LIDMY+K G ++ ++ +F +   K  A WN +I G+ I+G+G +AI LF  +  
Sbjct: 638  AFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQN 697

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G +PD+ TF  +L AC ++GLV EG KY   M   Y + P +EHY+C+VD+LG+AG L 
Sbjct: 698  KGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLT 757

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA   +  MP +PD+ IW +LL SCR +G LE  E  S++L +LEP  + NY L+ NL A
Sbjct: 758  EALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYA 817

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
               +W++V ++R  M E G+      SWI+I  +V+ F         + +I      L  
Sbjct: 818  GLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEK 877

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            ++ K+GY PDT CV  +++EE K K+L SH+EKLAI +GL+ T     +RV KN R+C D
Sbjct: 878  KISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVD 937

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH A K +S V  R+I +RD  RFHHF+ G C+C D W
Sbjct: 938  CHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/625 (26%), Positives = 276/625 (44%), Gaps = 69/625 (11%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASL-IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           + I+L+ C       +G +VHA +        DV L   ++  Y  C     +  +F   
Sbjct: 95  IGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAA 154

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHE 414
            + +D  L+N ++    RN  + +AI LF E+  ++  A    T+  + +ACA V     
Sbjct: 155 KE-KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVEL 213

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+ +H   LK+   S+  V N LI+MY +   +E A +VF++M++ NL SWNS       
Sbjct: 214 GEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNS------- 266

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                                  + + C  +G F  G    V   L   +  G  P+ ++
Sbjct: 267 -----------------------VMYACSENGGF--GECCGVFKRLLISEEEGLVPDVAT 301

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
           +  V+ A   +  ++ G   HG   + G+  ++ V  SL+DMY K   L  A+ +FD   
Sbjct: 302 MVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNG 361

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE-----------IKPDLVSWNSLVSGY 643
            +N+V+WN++I GY  +G F    ++L +M+ EE           + P     + L+S  
Sbjct: 362 GKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLK 421

Query: 644 SIWGQS------KEALV----IIHHMKNSGI-----------YPNVVTWTSLISGSLQNE 682
            I G +      K+ LV    +  + K S +              V +W +LI    QN 
Sbjct: 422 EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNG 481

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              +SL  F+ M    + P+  T+ SLL  C  L  L+ GKEIH   L+NG   D ++  
Sbjct: 482 FPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGI 541

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+ +Y +  ++   + +F K  NK+L  WN MI GF+      EA+  F ++L  G +P
Sbjct: 542 SLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKP 601

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
             I  T +L AC     +  G K   S +   ++         ++D+  K G ++++ + 
Sbjct: 602 QEIAVTGVLGACSQVSALRLG-KEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNI 660

Query: 863 IRTMPFKPDATIWGALLGSCRIHGH 887
              +  K D  +W  ++    IHGH
Sbjct: 661 FDRVNEK-DEAVWNVIIAGYGIHGH 684



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 152/646 (23%), Positives = 274/646 (42%), Gaps = 108/646 (16%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA  +K G    SD  V  +LI  Y + G   SA K F    +R+   W+S +      G
Sbjct: 218 HALALKAGGF--SDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENG 275

Query: 273 GEVQELLEVWGEL---HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           G   E   V+  L     +G++     +  ++  C  +    +G+ VH    K G   +V
Sbjct: 276 G-FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEV 334

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  +L++ Y KC  +  A  LF +++  ++ + WN II    +   +    +L +EMQ 
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALF-DMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQR 393

Query: 390 SSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                ++  T++ +L AC+        K+IHGY  +     +  V N  ++ Y++ + L+
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLD 453

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A RVF  M+   +SSWN++I ++   G+   +  LF  M  S + PD           F
Sbjct: 454 CAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPD----------RF 503

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
           T GS                         +L A   L+ L+ G+E HG++LRNGL+ D +
Sbjct: 504 TIGS-------------------------LLLACARLKFLRCGKEIHGFMLRNGLELDEF 538

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           +G SLM +Y++   +   + +FD M+N+++V WN +I+G+    L   A     QM    
Sbjct: 539 IGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGG 598

Query: 629 IKPDLVSWNSLVSGYSI-----WGQSKEALVIIHHM---------------------KNS 662
           IKP  ++   ++   S       G+   +  +  H+                     ++ 
Sbjct: 599 IKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQ 658

Query: 663 GIYPNV-----VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            I+  V       W  +I+G   + +  ++++ F  MQ +  +P+S T   +L  C   G
Sbjct: 659 NIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAG 718

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
           L+  G                      +    +  NL   +          L  + C++ 
Sbjct: 719 LVTEG----------------------LKYLGQMQNLYGVK--------PKLEHYACVVD 748

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
                G   EA+ L +E+ +   +PD+  +++LL++C+N G +E G
Sbjct: 749 MLGRAGQLTEALKLVNEMPD---EPDSGIWSSLLSSCRNYGDLEIG 791



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 208/466 (44%), Gaps = 80/466 (17%)

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLE 448
           SS+      I  +L+AC      H G+++H  V  S  L +++ +   +I+MYS      
Sbjct: 86  SSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPS 145

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            +  VFD+ K                                   + D+  +N LLSG+ 
Sbjct: 146 DSRGVFDAAK-----------------------------------EKDLFLYNALLSGYS 170

Query: 509 THGSYQNVLTL-LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
            +  +++ ++L L  + +    P+  ++  V +A   +  ++ G   H   L+ G   D 
Sbjct: 171 RNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDA 230

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--- 624
           +VG +L+ MY K   +++A +VF+ M+NRN+V+WNS++      G F     +  ++   
Sbjct: 231 FVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLIS 290

Query: 625 EEEEIKPDLVSW-----------------------------------NSLVSGYSIWGQS 649
           EEE + PD+ +                                    NSLV  YS  G  
Sbjct: 291 EEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYL 350

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSS 708
            EA  +     N G   NVV+W ++I G  +  ++R   +   +MQ+E+ ++ N  T+ +
Sbjct: 351 GEARALFD--MNGG--KNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLN 406

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           +L  C G   L + KEIH    ++GF+KD  VA   +  Y+K  +L  A  VF     KT
Sbjct: 407 VLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKT 466

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           ++SWN +I   A  G   +++ LF  ++++G  PD  T  +LL AC
Sbjct: 467 VSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLAC 512



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 10/328 (3%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L S+K  H    + G +   D++V  + +  Y +      A + F     ++ + W++ +
Sbjct: 417 LLSLKEIHGYAFRHGFL--KDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALI 474

Query: 266 EDY--ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
             +    F G+  +L  V   +   G+      +  +L  C +L     G E+H  +++ 
Sbjct: 475 GAHAQNGFPGKSLDLFLV---MMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRN 531

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G + D  +  +LM+ Y +C  +     +F ++ + +  + WN +I    +NE    A+  
Sbjct: 532 GLELDEFIGISLMSLYIQCSSMLLGKLIFDKMEN-KSLVCWNVMITGFSQNELPCEALDT 590

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           FR+M     K     +  +L AC++V A   GK++H + LK+ L  +  V   LI MY++
Sbjct: 591 FRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAK 650

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              +E +  +FD + + + + WN +I+ Y   G+   A  LF  M +   +PD  T+  +
Sbjct: 651 CGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGV 710

Query: 504 LSGHFTHGSYQNVLTLLRGMQSL-GFRP 530
           L      G     L  L  MQ+L G +P
Sbjct: 711 LIACNHAGLVTEGLKYLGQMQNLYGVKP 738


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/837 (30%), Positives = 428/837 (51%), Gaps = 74/837 (8%)

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHL 331
            G V E+L+ +      GV+  S  L+ +LK C  +    LG ++H   +K G D  +V  
Sbjct: 78   GMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSA 137

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
              +L++ Y KC  V    ++F  +   ++ + W  ++      +     + LF  M+   
Sbjct: 138  GTSLVDMYMKCGSVCEGIEVFEGMPK-KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEG 196

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                  T   +L A A  GA   G+++H   +K    S++ VCN L++MY++   +E A 
Sbjct: 197  IWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAK 256

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             VF+ M+  ++ SWN++++   GL   +         + SR             G  T  
Sbjct: 257  SVFNWMETRDMVSWNTLMA---GLQLNECELEALQLFHESRAT----------MGKMTQS 303

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
            +Y  V+ L                         L+ L   R+ H  +L++G      V T
Sbjct: 304  TYATVIKL----------------------CANLKQLALARQLHSCVLKHGFHLTGNVMT 341

Query: 572  SLMDMYVKNDCLQNAQEVFD-NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            +L D Y K   L +A  +F     +RN+V+W ++ISG    G    A  + ++M E+ + 
Sbjct: 342  ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVM 401

Query: 631  PDLVSWN-------------------------------SLVSGYSIWGQSKEALVIIHHM 659
            P+  +++                               +L++ YS +G +++AL I   +
Sbjct: 402  PNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMI 461

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL- 718
            +      +VV W++++S   Q  +   +   F +M  + IKPN  T+SS++  C      
Sbjct: 462  EQK----DVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAG 517

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            +  G++ H + +K  +     V++ L+ MYS+ GN+ SA+ VF +  ++ L SWN MI G
Sbjct: 518  VDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISG 577

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            +A +G   +AI  F ++  +G Q D +TF A++  C ++GLV EG +YFDSM  D+ I P
Sbjct: 578  YAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINP 637

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
            T+EHY+CMVDL  +AG LDE    IR MPF   A +W  LLG+CR+H ++E  + ++ +L
Sbjct: 638  TMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKL 697

Query: 899  FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
              LEP +S+ Y L+ N+ A + +W++ + +R  MD   VK     SWIQI   VH F A 
Sbjct: 698  LSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAF 757

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
               HP + +IY +L  +++ +K+ GY P+T  V  DI E++K  +L++H+E+LA+ +GL+
Sbjct: 758  DKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLI 817

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             T    P++++KN RVC DCH   K +S++  REI +RD +RFHHF  G CSC D W
Sbjct: 818  ATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 107/238 (44%), Gaps = 7/238 (2%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HAQ+IK    +     V  +L+  Y +FG    A   F +   +    WS+ L  +    
Sbjct: 423 HAQVIKTN--YQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQ-A 479

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHL 331
           G+ +    ++ ++  +G+      ++ ++  C    A    G + HA  IK  +   + +
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICV 539

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             AL++ Y +  +++SA  +F   +D  D + WN +I    ++     AI+ FR+M+ S 
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTD-RDLVSWNSMISGYAQHGYSMKAIETFRQMEASG 598

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLE 448
            +    T + ++  C   G   EG+Q    +++   +   +    C++ +YSR  KL+
Sbjct: 599 IQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLD 656


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/800 (32%), Positives = 412/800 (51%), Gaps = 71/800 (8%)

Query: 312  LGVEVHASLIKRG--FDFDVHLKCALMNFYGKCRDVESANKLFSEVS-DLEDDLLWNEII 368
            LG  +   L++ G   + D  +  +L+  Y KC  V +A  +F  +   L D + W  + 
Sbjct: 65   LGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMA 124

Query: 369  MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH-EGKQIHGYVLKSAL 427
                RN     A++LF E         + T+    QAC     FH  G  + G V K   
Sbjct: 125  SCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGF 184

Query: 428  -ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
              +++SV   LI M+++N  L    RVFD                            LF 
Sbjct: 185  WGTDVSVGCALIDMFAKNGDLVAMRRVFDG---------------------------LFE 217

Query: 487  KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            +         ++ W  L++ +   G     + L   M   GF+P+  ++S +L A TEL 
Sbjct: 218  RT--------VVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELG 269

Query: 547  LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN---DCLQNAQEVFDNMKNRNIVAWNS 603
              + G++ H   LR GL+ D  V   L+DMY K+     L NA+EVF+ M   N++AW +
Sbjct: 270  SFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTA 329

Query: 604  LISGYCFKGLFVNAKKML-NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
            L+SGY  +G   N   +L  +M  E I+P+ ++++S++   +  G       I  H   S
Sbjct: 330  LLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKS 389

Query: 663  GIYPNVVTWTSLIS-----GSLQ------NENYRESLKFF---------------IQMQQ 696
             +    V   +L+S     GS++      ++ Y +++  F                Q+++
Sbjct: 390  NLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIER 449

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
             ++  ++ T  SL+     +G+L  G+ +H L LK GF  D  +   L+ MYS+ G L  
Sbjct: 450  MELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVD 509

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A +VF +  +  + SW  MI G A +G    A+ LFH+++  G +P+ +T+ A+L+AC +
Sbjct: 510  ACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSH 569

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            +GLV+EG ++F  M   + +IP +EHY+CMVDLLG++G +++A DFI  MP + DA +W 
Sbjct: 570  AGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWK 629

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
             LLG+C+ H +++  EIA+  + +LEP + A Y L+ NL A +  W+ V R+R  M +  
Sbjct: 630  TLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKN 689

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            +      SW+ +D  +H F A    HP   EIY +L  L+ E+K +GYVPDT  V  D+ 
Sbjct: 690  LMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMS 749

Query: 997  EEEKGKVLLSHTEKLAIVYGLMK-TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            +E K   LL H+EK+A+ +GL+  T +  PIR+ KN RVC DCH+A KY+S   GREI L
Sbjct: 750  DELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIIL 809

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFH  ++GECSC + W
Sbjct: 810  RDSNRFHRMKDGECSCGEYW 829



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 218/484 (45%), Gaps = 49/484 (10%)

Query: 217 MIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEV 275
           + K+G  W +D  V  +LI  + + GD  +  + F   F R+   W+  +  Y    G  
Sbjct: 179 VFKLG-FWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQ-SGYS 236

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
            E +E++ ++   G       L+ +L  CT+L +F LG ++H+  ++ G + D  + C L
Sbjct: 237 DEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGL 296

Query: 336 MNFYGKCRDVES---ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK-LFREMQFSS 391
           ++ Y K  + +S   A ++F+ +    + + W  ++   ++    +N +  LF +M    
Sbjct: 297 VDMYAKSHNGQSLHNAREVFNRMPK-HNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEG 355

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +    T   ML+ACA +G    G+QIH + +KS L     V N L+SMY+ +  +E A 
Sbjct: 356 IRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEAR 415

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             FD + + N+ S++  +         D   + +      R++  I T        FT G
Sbjct: 416 HAFDQLYEKNMVSFSGNLDG-------DGRSNTYQDYQIERMELGIST--------FTFG 460

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
           S                         ++ A   + +L  G+  H   L+ G   D  +G 
Sbjct: 461 S-------------------------LISAAASVGMLTKGQRLHALSLKAGFGSDRAIGN 495

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           SL+ MY +   L +A +VFD M + N+++W S+ISG    G    A ++ + M    +KP
Sbjct: 496 SLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKP 555

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
           + V++ +++S  S  G  KE       M K+ G+ P +  +  ++    ++    ++L F
Sbjct: 556 NDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDF 615

Query: 691 FIQM 694
             +M
Sbjct: 616 INEM 619


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema cordifolium]
          Length = 679

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/712 (34%), Positives = 381/712 (53%), Gaps = 76/712 (10%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            + L WN +I     +    +A+ L+  M        S T   + ++CAK  A  EGKQIH
Sbjct: 42   NQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIH 101

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              +LK  L  +L V   LISMY++N  +E A +VFD+    ++ S+ +MI+ Y   G +D
Sbjct: 102  AQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMD 161

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A  +F+++       D+++WN ++SG+   G Y+  L L   M  +  +P+ S+++ VL
Sbjct: 162  KAQKMFDEIPIK----DVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVL 217

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
               T    ++ GR+ H +I  +G   +L +  +L+D+Y K   ++ A  +F+ ++ ++++
Sbjct: 218  STCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVI 277

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
            +WN+LI GY     ++N                                 KEAL++   M
Sbjct: 278  SWNTLIGGYA----YIN-------------------------------HHKEALLVFQEM 302

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
               G  PN V                                   TM S+L  C  LG +
Sbjct: 303  LKLGETPNDV-----------------------------------TMLSILPACAHLGAI 327

Query: 720  QNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
              G+ IH    K   G I +  + T LIDMY+K GN+++A +VF    NK+L+S N MI 
Sbjct: 328  DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            GFA++G    A  L   + + G +PD ITF  LL+AC ++GL + G K F SM+ DY I 
Sbjct: 388  GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P +EHY CM+DLLG++G   EA + I +M  +PD  IWG+LL +C+IH +LE  E+ +++
Sbjct: 448  PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQK 507

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L K+EP N  +Y L+ N+ A S RW+DV R+R  +++ G+K V   S I+ID +VH F  
Sbjct: 508  LMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLI 567

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
                HP   EIY  L  + S + + G+V DT  V Q+++EE K   L  H+EKLAI +GL
Sbjct: 568  GDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGL 627

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            + TK    +R++KN RVC +CH A K +S +  REI  RD +RFHHF++G C
Sbjct: 628  ISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 200/458 (43%), Gaps = 71/458 (15%)

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G+   S     + K C K  A   G ++HA ++K G   D+H+  +L++ Y +   VE A
Sbjct: 73  GLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDA 132

Query: 349 NKLFSEVS------------------------------DLEDDLLWNEIIMVKLRNEKWE 378
           +K+F   S                               ++D + WN +I       +++
Sbjct: 133 HKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYK 192

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A++LF EM     K    T+  +L  C   G    G+QIH ++      SNL + N LI
Sbjct: 193 EALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALI 252

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            +YS+  ++E A  +F+ ++  ++ SWN++I  Y  + +                     
Sbjct: 253 DLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINH--------------------- 291

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
                         ++  L + + M  LG  PN  ++  +L A   L  +  GR  H YI
Sbjct: 292 --------------HKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 337

Query: 559 LR--NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
            +   G+  +  + TSL+DMY K   ++ A +VFD + N+++ + N++I G+   G    
Sbjct: 338 DKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADA 397

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLI 675
           A  +L++M+++ I+PD +++  L+S  S  G S     I   M  +  I P +  +  +I
Sbjct: 398 AFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMI 457

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               ++  ++E+ +    M  E   P+     SLL+ C
Sbjct: 458 DLLGRSGLFKEAEELINSMTME---PDGVIWGSLLKAC 492



 Score =  120 bits (302), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 4/277 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y   G+   A K F     +    W++ +  Y   G   +E LE++ E+    V 
Sbjct: 149 AMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIG-RYKEALELFNEMMKMDVK 207

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  CT      LG ++H+ +   GF  ++ L  AL++ Y KC ++E A+ L
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E    +D + WN +I         + A+ +F+EM          T++ +L ACA +GA
Sbjct: 268 F-EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGA 326

Query: 412 FHEGKQIHGYVLK--SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
              G+ IH Y+ K    + +N S+   LI MY++   +E A +VFD++ + +LSS N+MI
Sbjct: 327 IDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMI 386

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             +   G  D A+ L ++M    I+PD IT+  LLS 
Sbjct: 387 FGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSA 423



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 7/186 (3%)

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           L  A  VF+        SWN MI G A+  +   A+ L+  ++  G  P++ TF  L  +
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
           C  S   +EG K   +    Y +   +  ++ ++ +  + G +++A     T   + D  
Sbjct: 88  CAKSKAAQEG-KQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHR-DVV 145

Query: 874 IWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSM 932
            + A++      G+++ A+    ++F   P  +  ++N M++  A   R+++   L + M
Sbjct: 146 SYTAMITGYASRGNMDKAQ----KMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEM 201

Query: 933 DEVGVK 938
            ++ VK
Sbjct: 202 MKMDVK 207


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  438 bits (1126), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 258/797 (32%), Positives = 412/797 (51%), Gaps = 73/797 (9%)

Query: 312  LGVEVHASLIKRG--FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
            LG  +H  L+ RG   D D  +  +L+  Y +C  V SA  +F  +  L D + W  +  
Sbjct: 66   LGRALHRRLL-RGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMAS 124

Query: 370  VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE-----GKQIHGYVLK 424
               RN     ++ L  EM  S     + T+  +  AC      HE     G  + G V K
Sbjct: 125  CLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFP----HELYCLVGGVVLGLVHK 180

Query: 425  SAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
              L  ++++V + LI M +RN  L  A +VFD +                          
Sbjct: 181  MGLWGTDIAVGSALIDMLARNGDLASARKVFDGL-------------------------- 214

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                     I+  ++ W  L+S +      +  + +       GF P+  ++S ++ A T
Sbjct: 215  ---------IEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACT 265

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN---AQEVFDNMKNRNIVA 600
            EL  ++ G + H   LR G   D  V   L+DMY K++  Q    A +VF+ M+  ++++
Sbjct: 266  ELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVIS 325

Query: 601  WNSLISGYCFKGLFVNAKKML-NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
            W +LISGY   G+  N   +L  +M  E IKP+ ++++S++   +          +  H+
Sbjct: 326  WTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHV 385

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE---------------------D 698
              S          +L+S   ++    E+ + F Q+ +                      D
Sbjct: 386  IKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMD 445

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            +  +S+T +SL+     +G+L  G+++H + LK GF  D +V+  L+ MYS+ G L+ A 
Sbjct: 446  MGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDAC 505

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
              F +  ++ + SW  MI G A +G  + A+ LFH+++ TG +P+ +T+ A+L+AC + G
Sbjct: 506  RSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVG 565

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            LV EG +YF SM  D+ +IP +EHY+CMVDLL ++G + EA +FI  MP K DA +W  L
Sbjct: 566  LVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTL 625

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            LG+CR H ++E  EIA++ + +LEP + A Y L+ NL A +  W++V R+R +M +  + 
Sbjct: 626  LGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLN 685

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                 SW++++   H F A    HP   +IY +L  LV E+K +GYVPDT  V  D+ +E
Sbjct: 686  KETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDE 745

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
             K + LL H+EK+A+ +GL+ T +  PIR+ KN RVC+DCH+A KYMS    REI LRD 
Sbjct: 746  LKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDS 805

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFH  ++GECSC + W
Sbjct: 806  NRFHRMKDGECSCGEYW 822



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 204/458 (44%), Gaps = 75/458 (16%)

Query: 219 KMGKIWNSDDMVKSLIFHYL-EFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQE 277
           KMG +W +D  V S +   L   GD  SA K F     ++   W+  +  Y   G   +E
Sbjct: 180 KMG-LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQ-GECAEE 237

Query: 278 LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
            +E++ +    G       ++ ++  CT+L +  LG+++H+  ++ GF  D  + C L++
Sbjct: 238 AVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVD 297

Query: 338 FYGKC---RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK-LFREMQFSSAK 393
            Y K    + ++ ANK+F  +    D + W  +I   +++   EN +  LF EM   S K
Sbjct: 298 MYAKSNIEQAMDYANKVFERMRK-NDVISWTALISGYVQSGVQENKVMVLFGEMLNESIK 356

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T   +L+ACA +     G+Q+H +V+KS   +  +V N L+SMY+ +  +E A RV
Sbjct: 357 PNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRV 416

Query: 454 F----------------DSMKDHNL---------SSWNSMISS----------------- 471
           F                D+  DH +         S++ S+IS+                 
Sbjct: 417 FNQLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMT 476

Query: 472 ------------------YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
                             Y+  GY++ A   FN++       ++I+W  ++SG   HG  
Sbjct: 477 LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDR----NVISWTSMISGLAKHGYA 532

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN-GLDYDLYVGTS 572
           +  L+L   M   G +PN  +   VL A + + L++ G+E    + R+ GL   +     
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYC 609
           ++D+  ++  ++ A E  + M  + + + W +L+ G C
Sbjct: 593 MVDLLARSGLVKEALEFINEMPLKADALVWKTLL-GAC 629



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 52/317 (16%)

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           DL +G +L    ++ D L           +R+ V  NSL++ Y   G   +A+ + + M 
Sbjct: 63  DLRLGRALHRRLLRGDLL-----------DRDAVVANSLLTLYSRCGAVASARNVFDGMR 111

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                 D+VSW ++ S  +  G  +E+L++I  M  SG+ PN  T  ++      +E Y 
Sbjct: 112 GLR---DIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYC 168

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
                 + +  +                  +GL               +  D  V + LI
Sbjct: 169 LVGGVVLGLVHK------------------MGL---------------WGTDIAVGSALI 195

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
           DM +++G+L SAR+VF     KT+  W  +I  +      +EA+ +F + LE GF+PD  
Sbjct: 196 DMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRY 255

Query: 806 TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
           T +++++AC   G V  G +   S++              +VD+  K+  +++A D+   
Sbjct: 256 TMSSMISACTELGSVRLGLQ-LHSLALRMGFASDACVSCGLVDMYAKSN-IEQAMDYANK 313

Query: 866 M---PFKPDATIWGALL 879
           +     K D   W AL+
Sbjct: 314 VFERMRKNDVISWTALI 330



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 717 GLLQNGKEIHCLCLKNGFI-KDAYVATGLIDMYSKSGNLKSAREVFRKSAN-KTLASWNC 774
           G L+ G+ +H   L+   + +DA VA  L+ +YS+ G + SAR VF      + + SW  
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           M    A  G  +E++LL  E+LE+G  P+A T  A+  AC
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC 161


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/718 (33%), Positives = 378/718 (52%), Gaps = 79/718 (11%)

Query: 396  SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
            +  +  ++Q  AK      GKQ+H  ++ +       + N L++MYS+  +L+ A ++FD
Sbjct: 5    TNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFD 64

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            +M   NL SW +MI                                   SG   +  +  
Sbjct: 65   TMPQRNLVSWTAMI-----------------------------------SGLSQNSKFSE 89

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
             +    GM+  G  P   + S  ++A   L  ++ G++ H   L+ G+  +L+VG++L D
Sbjct: 90   AIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLED 149

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI------ 629
            MY K   + +A +VF+ M  ++ V+W ++I GY   G F  A     +M +EE+      
Sbjct: 150  MYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 209

Query: 630  -----------------------------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
                                         + D+   N+L   YS  G  + A  +     
Sbjct: 210  LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF---- 265

Query: 661  NSGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
              GI     NVV++T LI G ++ E   + L  F++++++ I+PN  T SSL++ C    
Sbjct: 266  --GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             L+ G ++H   +K  F +D +V++ L+DMY K G L+ A + F +  + T  +WN ++ 
Sbjct: 324  ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVS 383

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
             F  +G GK+AI +F  +++ G +P+AITF +LL  C ++GLVEEG  YF SM   Y ++
Sbjct: 384  VFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 443

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P  EHYSC++DLLG+AG L EA +FI  MPF+P+A  W + LG+CRIHG  E  ++A+ +
Sbjct: 444  PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEK 503

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L KLEP NS    L+ N+ A   +WEDV  +R  M +  VK +  +SW+ +    HVF A
Sbjct: 504  LVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 563

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
            E   HP    IY +L  L+ ++K  GYVP T  V  D+D+  K K+L  H+E++A+ + L
Sbjct: 564  EDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFAL 623

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +      PI V KN RVC DCH+A K++S V GR+I +RD +RFHHF +G CSC D W
Sbjct: 624  ISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 225/519 (43%), Gaps = 70/519 (13%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++HA LI  G+     L   L+N Y KC +++ A KLF  +    + + W  +I    
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ-RNLVSWTAMISGLS 82

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +N K+  AI+ F  M+              ++ACA +G+   GKQ+H   LK  + S L 
Sbjct: 83  QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V + L  MYS+   +  A +VF+ M   +  SW +MI  Y+ +G  + A   F KM    
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           +  D                 Q+VL                     L A   L+  K+GR
Sbjct: 203 VTID-----------------QHVLC------------------STLGACGALKACKFGR 227

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD-NMKNRNIVAWNSLISGYCFK 611
             H  +++ G + D++VG +L DMY K   +++A  VF  + + RN+V++  LI GY   
Sbjct: 228 SVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVET 287

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLV----------SGYSIWGQSKE---------A 652
                   +  ++  + I+P+  +++SL+           G  +  Q  +         +
Sbjct: 288 EQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 347

Query: 653 LVIIHHMKNSGIY------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
            +++      G+             P  + W SL+S   Q+   ++++K F +M    +K
Sbjct: 348 SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVK 407

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           PN+ T  SLL  C   GL++ G +  + +    G +      + +ID+  ++G LK A+E
Sbjct: 408 PNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKE 467

Query: 760 VFRKSANKTLASWNCMIMGFA-IYGNGKEAILLFHELLE 797
              +   +  A   C  +G   I+G+ +   L   +L++
Sbjct: 468 FINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK 506



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/496 (23%), Positives = 217/496 (43%), Gaps = 40/496 (8%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +   L+  Y + G+   A K F     R+   W++ +    S   +  E +  +  +   
Sbjct: 42  LTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL-SQNSKFSEAIRTFCGMRIC 100

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G +      +  ++ C  L +  +G ++H   +K G   ++ +   L + Y KC  +  A
Sbjct: 101 GEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDA 160

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            K+F E+   +D++ W  +I    +  ++E A+  F++M           +   L AC  
Sbjct: 161 CKVFEEMP-CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA 219

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A   G+ +H  V+K   ES++ V N L  MYS+   +E A+ VF       + S    
Sbjct: 220 LKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF------GIDSECRN 273

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           + SYT                            CL+ G+      +  L++   ++  G 
Sbjct: 274 VVSYT----------------------------CLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            PN  + S +++A      L+ G + H  +++   D D +V + L+DMY K   L+ A +
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 365

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
            FD + +   +AWNSL+S +   GL  +A K+  +M +  +KP+ +++ SL++G S  G 
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 425

Query: 649 SKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
            +E L   + M K  G+ P    ++ +I    +    +E+ +F  +M  E   PN+    
Sbjct: 426 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFE---PNAFGWC 482

Query: 708 SLLQTCGGLGLLQNGK 723
           S L  C   G  + GK
Sbjct: 483 SFLGACRIHGDKEMGK 498



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 2/201 (0%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           ++  ++ ++QT      L+ GK++H L +  G+    ++   L++MYSK G L  A ++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                + L SW  MI G +      EAI  F  +   G  P    F++ + AC + G +E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            G K    ++  + I   +   S + D+  K G + +A      MP K D   W A++  
Sbjct: 124 MG-KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDG 181

Query: 882 CRIHGHLEYAEIASRRLFKLE 902
               G  E A +A +++   E
Sbjct: 182 YSKIGEFEEALLAFKKMIDEE 202


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 284/926 (30%), Positives = 439/926 (47%), Gaps = 141/926 (15%)

Query: 240  FGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI 299
             G    A + F     R    W+S +  Y S  G+V E   ++    GK +    R  TI
Sbjct: 184  LGRVEEARRVFNEMIQRDVVSWNSMINGY-SQNGKVDEARLLFDAFVGKNI----RTWTI 238

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L    K        EV  S+ +R    +V    A+++ Y +  D+++A KLF E+ + +
Sbjct: 239  LLTGYAKEGRIEEAREVFESMTER----NVVSWNAMISGYVQNGDLKNARKLFDEMPE-K 293

Query: 360  DDLLWNEII--------MVKLR------------------------NEKWENAIKLFREM 387
            +   WN ++        M + R                        ++ WE A  +F +M
Sbjct: 294  NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWE-AWDVFVKM 352

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
              + A+      V +L A   +        +    +K+  E ++ V + +++ Y+RN  L
Sbjct: 353  CRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSL 412

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM----------------NSS 491
            +LA   F++M + N  SW +MI+++   G +D A  L+ ++                   
Sbjct: 413  DLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVG 472

Query: 492  RIQ-----------PDIITWNCLLSGHFTHG----------------------------- 511
            RIQ           P+++ WN +++G+  +G                             
Sbjct: 473  RIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQ 532

Query: 512  --SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                +  L LL  +   G  P+ SS +  L A   +  ++ GR  H   ++ G  ++ YV
Sbjct: 533  NEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYV 592

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
               L+ MY K   +++   VF  ++ +                                 
Sbjct: 593  MNGLISMYAKCGNVEDGSHVFRTIRVK--------------------------------- 619

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
              D VSWNSL+SG S      +A V+   M       +VV+WT++IS  +Q  +   +L 
Sbjct: 620  --DTVSWNSLISGLSENYMLDDARVVFEKMPKR----DVVSWTAIISAYVQAGHGEVALD 673

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F+ M    IKPN  T++SLL  CG LG ++ G++ H L  K GF    +V   LI MY 
Sbjct: 674  LFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYF 733

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G  +    VF +     L +WN +++G A  G GKEAI +F ++   G  PD ++F  
Sbjct: 734  KCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLG 792

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L AC ++GLV+EGW +F+SM+  Y I+P + HY+CMVDLLG+AGYL EA   I  MP K
Sbjct: 793  VLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVK 852

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            PD+ IW ALLG+CRIH ++E  +  + RLF++    SA Y L+ NL A    W+ V  +R
Sbjct: 853  PDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIR 912

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              M + G+      SWIQ+   +H F      H    EIY  L       +  GY+PDT 
Sbjct: 913  KLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTN 972

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V  D++EE+K   LL H+EKLA+V+G++ T + +PI++IKN R+C DCHT  K+MS V 
Sbjct: 973  FVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVT 1032

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
             R+I +RDG RFHHFR+G CSC D W
Sbjct: 1033 LRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 283/605 (46%), Gaps = 78/605 (12%)

Query: 340 GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
           G+   VE A ++F+E+    D + WN +I    +N K + A  LF        K I RT 
Sbjct: 182 GRLGRVEEARRVFNEMIQ-RDVVSWNSMINGYSQNGKVDEARLLFDAF---VGKNI-RTW 236

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
             +L   AK G   E ++    V +S  E N+   N +IS Y +N  L+ A ++FD M +
Sbjct: 237 TILLTGYAKEGRIEEARE----VFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPE 292

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            N++SWNS+++ Y     +  A  LF++M     + + ++W  ++SG+     Y     +
Sbjct: 293 KNVASWNSVVTGYCHCYRMSEARELFDQMP----ERNSVSWMVMISGYVHISDYWEAWDV 348

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M     RP+ S   VVL A+T L  L+         ++ G + D+ VG+++++ Y +
Sbjct: 349 FVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTR 408

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI---------- 629
           N  L  A   F+ M  RN  +W ++I+ +   G   +A ++  ++ E+ +          
Sbjct: 409 NGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAY 468

Query: 630 -----------------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                             P++V+WN++++GY+  G  KEA  +   M       N  +W 
Sbjct: 469 AQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMP----VKNSASWA 524

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           ++I+G +QNE  RE+L+  I++ +    P+ ++ +S L  C  +G ++ G+ IH L +K 
Sbjct: 525 AMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKT 584

Query: 733 GFIKDAYVATGLIDMYSKSGN-------------------------------LKSAREVF 761
           G   ++YV  GLI MY+K GN                               L  AR VF
Sbjct: 585 GCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVF 644

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            K   + + SW  +I  +   G+G+ A+ LF ++L  G +P+ +T T+LL+AC N G ++
Sbjct: 645 EKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIK 704

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            G + F ++         +   + ++ +  K GY D  +     MP + D   W A+L  
Sbjct: 705 LG-EQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFCVFEEMP-EHDLITWNAVLVG 761

Query: 882 CRIHG 886
           C  +G
Sbjct: 762 CAQNG 766



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 198/457 (43%), Gaps = 92/457 (20%)

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           K   +++L  CN  I    R  ++E A RVF+ M   ++ SWNSMI+ Y+  G VD A  
Sbjct: 164 KETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARL 223

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           LF+      +  +I TW  LL+G+   G  +                       V +++T
Sbjct: 224 LFDAF----VGKNIRTWTILLTGYAKEGRIEEARE-------------------VFESMT 260

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
           E               RN + ++     +++  YV+N  L+NA+++FD M  +N+ +WNS
Sbjct: 261 E---------------RNVVSWN-----AMISGYVQNGDLKNARKLFDEMPEKNVASWNS 300

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           +++GYC       A+++ +QM E     + VSW  ++SGY                    
Sbjct: 301 VVTGYCHCYRMSEARELFDQMPER----NSVSWMVMISGY-------------------- 336

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
                          +   +Y E+   F++M +   +P+ +    +L    GL  L+   
Sbjct: 337 ---------------VHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIG 381

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            +  + +K G+  D  V + +++ Y+++G+L  A   F     +   SW  MI  FA  G
Sbjct: 382 SLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCG 441

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
              +AI L+  + E        T TA++ A    G +++    FD +     + P +  +
Sbjct: 442 RLDDAIQLYERVPEQ----TVATKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAW 492

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           + ++    + G L EA D  + MP K  A+ W A++ 
Sbjct: 493 NAIIAGYTQNGMLKEAKDLFQKMPVKNSAS-WAAMIA 528



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 34/300 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + G    A   F     ++ A W++ +  +     E +E LE+  ELH  G +
Sbjct: 494 AIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQ-NEESREALELLIELHRSGSV 552

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                 T  L  C  +    +G  +H+  IK G  F+ ++   L++ Y KC +VE  + +
Sbjct: 553 PSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHV 612

Query: 352 FSEVSDLEDDLLWNEII------------------MVKLRNEKW-------------ENA 380
           F  +  ++D + WN +I                  M K     W             E A
Sbjct: 613 FRTIR-VKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVA 671

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           + LF +M     K    T+  +L AC  +GA   G+Q H  + K   ++ L V N LI+M
Sbjct: 672 LDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITM 731

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y +    E    VF+ M +H+L +WN+++      G    A  +F +M    I PD +++
Sbjct: 732 YFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSF 790



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 16/181 (8%)

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           I    + G ++ AR VF +   + + SWN MI G++  G   EA LLF   +    +   
Sbjct: 178 IQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR--- 234

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            T+T LL      G +EE  + F+SM T+ N++     ++ M+    + G L  A     
Sbjct: 235 -TWTILLTGYAKEGRIEEAREVFESM-TERNVVS----WNAMISGYVQNGDLKNARKLFD 288

Query: 865 TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP-CNSANYNLMMN-LLAMSNRW 922
            MP K  A+    + G C  +   E     +R LF   P  NS ++ +M++  + +S+ W
Sbjct: 289 EMPEKNVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNSVSWMVMISGYVHISDYW 343

Query: 923 E 923
           E
Sbjct: 344 E 344


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/689 (33%), Positives = 386/689 (56%), Gaps = 10/689 (1%)

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS-VCNCLISMYSRNNKL 447
            +++  A      ++   C +     + K++  ++     + N + + N L+++Y+++ ++
Sbjct: 15   YTNGPASHECYTRLALECFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEI 74

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
              A ++FD M   +  SWN+M+S Y   G V+    +F+ M S     D +++N ++SG 
Sbjct: 75   SHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSR----DSVSYNTVISGF 130

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              +G     L +   MQ  G +P   +   VL A T+L  L+ G++ HG I+   L  ++
Sbjct: 131  AGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNV 190

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +V  +L D+Y +   +  A+ +FD M  RN+V WN +ISGY           + ++M+  
Sbjct: 191  FVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVS 250

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
             +KPD V+ +S++  Y   G   EA  +   ++      + V WT +I G  QN    ++
Sbjct: 251  NLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREK----DEVCWTIMIVGCAQNGKEEDA 306

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            L  F +M  E+ +P+  T+SS++ +C  L  L +G+ +H      G   D  V++ L+DM
Sbjct: 307  LLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDM 366

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y K G  + A  +F     + + SWN MI G+A+ G   EA+ L+  +LE   +PD++TF
Sbjct: 367  YCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTF 426

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
              +L+AC ++GLVEEG +YF SMS  + + PT +HY+CMV+L G++G++D+A D I +M 
Sbjct: 427  VGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMS 486

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
             +P++ IW  +L  C + G +++ E+A+R L +L P N+  Y ++ N+ A   RW+DV  
Sbjct: 487  QEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVAS 546

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            +R  M    VK    +SWI+ID  VH F A+   HP    I+ +L  L+ ++++ G+ P+
Sbjct: 547  IRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPN 606

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK-SRAPIRVIKNTRVCSDCHTAAKYMS 1046
            T  V  D  E+EK + +  H+EKLA+ YGL+K      PIR+IKN R C+DCH   K++S
Sbjct: 607  TNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVS 666

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +  R + LRD  RFHHF EG+CSC D W
Sbjct: 667  NITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 227/512 (44%), Gaps = 71/512 (13%)

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSE---------------------VSDL-------- 358
           D  +   L+N Y K  ++  A KLF E                     V DL        
Sbjct: 57  DTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMP 116

Query: 359 -EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
             D + +N +I     N +   A+ +F  MQ    K    T V +L AC ++     GKQ
Sbjct: 117 SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQ 176

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IHG ++   L  N+ VCN L  +Y+R  +++ A R+FD M   N+ +WN MIS Y     
Sbjct: 177 IHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQ 236

Query: 478 VDVAWSLFNKMNSSRIQPDIIT-------------------------------WNCLLSG 506
            +    LF++M  S ++PD +T                               W  ++ G
Sbjct: 237 PEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVG 296

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
              +G  ++ L L   M     RP+G ++S V+ +  +L  L +G+  HG     G++ D
Sbjct: 297 CAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDD 356

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           L V ++L+DMY K    ++A  +F  M+ RN+V+WNS+I GY   G  + A  +   M E
Sbjct: 357 LLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLE 416

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYR 685
           E +KPD V++  ++S     G  +E       M +  G+ P    +  +++   ++ +  
Sbjct: 417 ENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMD 476

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK-EIHCLCLKNGFIKDAYVATGL 744
           +++     M QE   PNS   +++L  C   G +++G+    CL   N F    Y+   L
Sbjct: 477 KAVDLISSMSQE---PNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIM--L 531

Query: 745 IDMYSKSG---NLKSAREVFRKSANKTLASWN 773
            +MY+  G   ++ S R + +    K  ++++
Sbjct: 532 SNMYAARGRWKDVASIRSLMKSKHVKKFSAYS 563



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 52/355 (14%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  CT+L+    G ++H  +I      +V +  AL + Y +C +++ A +LF  +  + 
Sbjct: 161 VLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMV-IR 219

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + WN +I   L+N + E  I LF EMQ S+ K    T   +L A  + G   E +++ 
Sbjct: 220 NVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVF 279

Query: 420 GYVLKSALESNLSVC-NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS------- 471
           G + +        VC   +I   ++N K E A  +F  M   N       ISS       
Sbjct: 280 GEIREKD-----EVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAK 334

Query: 472 --------------------------------YTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
                                           Y   G    AW++F+ M +     ++++
Sbjct: 335 LASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTR----NVVS 390

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           WN ++ G+  +G     L+L   M     +P+  +   VL A     L++ G+E    + 
Sbjct: 391 WNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMS 450

Query: 560 -RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKG 612
            ++GL+        +++++ ++  +  A ++  +M    N + W +++S    KG
Sbjct: 451 DQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 4/241 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S++  Y++ G    A K F     +    W+  +      G E   LL ++ E+  +   
Sbjct: 261 SVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALL-LFSEMLLENAR 319

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                ++ ++  C KL + + G  VH      G + D+ +  AL++ Y KC     A  +
Sbjct: 320 PDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTI 379

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           FS +    + + WN +I     N +   A+ L+  M   + K  S T V +L AC   G 
Sbjct: 380 FSTMQ-TRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGL 438

Query: 412 FHEGKQIHGYVL-KSALESNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMI 469
             EGK+    +  +  LE       C+++++ R+  ++ A  +  SM ++ N   W +++
Sbjct: 439 VEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVL 498

Query: 470 S 470
           S
Sbjct: 499 S 499


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/804 (31%), Positives = 393/804 (48%), Gaps = 126/804 (15%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN ++   +   + + AI +   M  +  K    T+   L+AC ++ ++  G   HG + 
Sbjct: 117  WNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLIC 176

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             +  ESN+ VCN L++MYSR+  LE A+ VFD +    +                     
Sbjct: 177  CNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGID-------------------- 216

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL------GFRPNGSSVSV 537
                        D+I+WN +++ H    + +  L L   M ++        R +  S+  
Sbjct: 217  ------------DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ---------- 587
            +L A   L+ L   +E H Y +RNG   D +V  +L+D Y K   +++A           
Sbjct: 265  ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324

Query: 588  ---------------------EVFDNMKNRNI----VAWNSLISGYCFKGLFVNAKKMLN 622
                                 E+F NM+  NI    + W+++I+GY  +G    A     
Sbjct: 325  VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384

Query: 623  QMEEEEIKPD-----------------------------------------------LVS 635
            QM     +P+                                               LV 
Sbjct: 385  QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
             N+L+  YS     K A  I + +       NVVTWT +I G  Q  +  ++LK F +M 
Sbjct: 445  HNALIDMYSKCRSFKAARTIFNSIPRRE--RNVVTWTVMIGGYAQYGDSNDALKLFSEMI 502

Query: 696  QED--IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA--YVATGLIDMYSKS 751
             +   + PN+ T+S +L  C  L  L+ GK+IH    ++   + +  +VA  LIDMYSK 
Sbjct: 503  SKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKC 562

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G++ +AR VF     +   SW  M+ G+ ++G GKEA+ +F ++ + GF PD I+F  LL
Sbjct: 563  GDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             AC +SG+V++G  YFD M +DY +I + +HY+C++DLL ++G LD+AW  I+ MP +P 
Sbjct: 623  YACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPS 682

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A IW ALL +CR+H ++E AE A  +L  ++  N  +Y L+ N+ A + RW+DV R+R  
Sbjct: 683  AAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQL 742

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M + G+K     SW+Q  +    F      HP + EIY  L  L+  +K +GYVP+T   
Sbjct: 743  MKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFA 802

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+D+EEK  +L  H+EKLA+ YGL+ T    PIR+ KN RVC DCH+A  Y+S +   
Sbjct: 803  LHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDH 862

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD +RFHHF+ G CSC   W
Sbjct: 863  EIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  193 bits (490), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 148/574 (25%), Positives = 259/574 (45%), Gaps = 73/574 (12%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L   LK C +L ++  G   H  +   GF+ +V +  AL+  Y +   +E A+ +F E++
Sbjct: 152 LPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEIT 211

Query: 357 --DLEDDLLWNEIIMVKLRNEKWENAIKLFREM------QFSSAKAISRTIVKMLQACAK 408
              ++D + WN I+   ++      A+ LF EM      + ++ ++   +IV +L ACA 
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACAS 271

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A  + K+IH Y +++   ++  VCN LI  Y++   ++ A  VF+ M+  ++ SWN+M
Sbjct: 272 LKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAM 331

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           ++ YT  G    A+ LF  M    I  D+ITW+ +++G+   G  Q  L   + M   G 
Sbjct: 332 VTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGS 391

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL------------DYDLYVGTSLMDM 576
            PN  ++  +L A   L  L  G E+H Y L+  L              DL V  +L+DM
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDM 451

Query: 577 YVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           Y K    + A+ +F+++  + RN+V W  +I GY   G   +A K+ ++M     KP  V
Sbjct: 452 YSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMIS---KPYAV 508

Query: 635 SWNSLVSGYSI--------------WGQSKEALVIIHHMKNSGIY--------------- 665
           + N+    Y+I               G+   A V  HH   S +Y               
Sbjct: 509 APNA----YTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564

Query: 666 -------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                         N V+WTS++SG   +   +E+L  F +MQ+    P+  +   LL  
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624

Query: 713 CGGLGLLQNGKEIHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLA 770
           C   G++  G +   +   + G I  A     +ID+ ++SG L  A + +       + A
Sbjct: 625 CSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAA 684

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            W  ++    ++ N + A    ++L+    + D 
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVSMKAENDG 718



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 220/513 (42%), Gaps = 101/513 (19%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +++SY   G    A S+  ++    +    + WN L+  H   G     + +   M   G
Sbjct: 89  VVASYLACGATSDALSVLERV----VPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            +P+  ++   L+A  EL   + G   HG I  NG + +++V  +L+ MY ++  L++A 
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204

Query: 588 EVFDNMKNR---NIVAWNSLISGYCFKG--------LFVNAKKMLNQMEEEEIKPDLVS- 635
            VFD +  +   ++++WNS+++ +  KG        LF     ++++    E + D++S 
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAH-VKGSNPRTALDLFSEMTTIVHEKATNE-RSDIISI 262

Query: 636 ----------------------------------WNSLVSGYSIWGQSKEALVIIH---- 657
                                              N+L+  Y+  G  K+A+ + +    
Sbjct: 263 VNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322

Query: 658 ---------------------------HMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
                                      +M+   I  +V+TW+++I+G  Q    +E+L  
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK------------DA 738
           F QM     +PNS T+ SLL  C  LG L  G E H   LK   +             D 
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 739 YVATGLIDMYSKSGNLKSAREVFRK--SANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            V   LIDMYSK  + K+AR +F       + + +W  MI G+A YG+  +A+ LF E++
Sbjct: 443 VVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMI 502

Query: 797 ETGF--QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS-CMVDLLGKA 853
              +   P+A T + +L AC +   +  G +    ++  +    ++   + C++D+  K 
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKC 562

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           G +D A +   +MP K +   W +++    +HG
Sbjct: 563 GDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHG 594



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 20/262 (7%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           WS+ +  Y    G  QE L+ + ++   G    S  +  +L  C  L A   G+E HA  
Sbjct: 363 WSAVIAGYAQ-RGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYS 421

Query: 321 IKRGF------------DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEI 367
           +K+                D+ +  AL++ Y KCR  ++A  +F+ +   E +++ W  +
Sbjct: 422 LKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVM 481

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISR---TIVKMLQACAKVGAFHEGKQIHGYVLK 424
           I    +     +A+KLF EM  S   A++    TI  +L ACA + +   GKQIH YV +
Sbjct: 482 IGGYAQYGDSNDALKLFSEM-ISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR 540

Query: 425 -SALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
               ES++  V NCLI MYS+   ++ A  VFDSM   N  SW SM+S Y   G    A 
Sbjct: 541 HHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEAL 600

Query: 483 SLFNKMNSSRIQPDIITWNCLL 504
            +F+KM  +   PD I++  LL
Sbjct: 601 DIFDKMQKAGFVPDDISFLVLL 622


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
            [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/645 (34%), Positives = 367/645 (56%), Gaps = 46/645 (7%)

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            +SWN        +G +  A  +F++      +P +  WN ++ G+ +H  + + + +   
Sbjct: 112  ASWN--------IGEIGYARKVFDEFP----EPSVFLWNAIIRGYSSHNFFGDAIEMYSR 159

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            MQ+ G  P+G ++  VL+A + + +L+ G+  HG I R G + D++V   L+ +Y K   
Sbjct: 160  MQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGR 219

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
            ++ A+ VF+ + +RNIV+W S+ISGY   GL + A ++  QM +  +KPD ++  S++  
Sbjct: 220  VEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRA 279

Query: 643  YS--------------------------------IWGQSKEALVIIHHMKNSGIYPNVVT 670
            Y+                                ++ +  + +V         I PNV+ 
Sbjct: 280  YTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEI-PNVMM 338

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W ++ISG  +N    E++  F +M  ++I+ +S T+ S +  C  +G L   K +     
Sbjct: 339  WNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYIN 398

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K  +  D +V T LIDM++K G++  AREVF ++ +K +  W+ MI+G+ ++G G++AI 
Sbjct: 399  KTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAID 458

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF+ + + G  P+ +TF  LL AC +SGLVEEGW+ F SM   Y I    +HY+C+VDLL
Sbjct: 459  LFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLL 517

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G++G+L+EA+DFI TMP +P  ++WGALLG+C+I+ H+   E A+ +LF L+P N+ +Y 
Sbjct: 518  GRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYV 577

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
             + NL A S  W+ V ++R  M E G+   L +S I+I+  +  F      HP   EI+ 
Sbjct: 578  QLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFE 637

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            EL  L   +K+ G++P    V  D+++EEK + L +H+E+LAI YGL+ T     +R+ K
Sbjct: 638  ELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITK 697

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R C +CH+A K +S +  REI +RD  RFHHF+ G CSC D W
Sbjct: 698  NLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 224/502 (44%), Gaps = 45/502 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES--F 271
           HAQ++  G +  S  +V   +      G+   A K F  +   S   W++ +  Y S  F
Sbjct: 91  HAQLVVSGLV-ESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
            G+    +E++  +   GV      L  +LK C+ +    +G  VH  + + GF+ DV +
Sbjct: 150 FGDA---IEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFV 206

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
           +  L+  Y KC  VE A  +F  + D  + + W  +I    +N     A+++F +M+  +
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDD-RNIVSWTSMISGYGQNGLPMEALRIFGQMRQRN 265

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            K     +V +L+A   V    +GK IHG V+K  LE    +   L +MY++  ++ +A 
Sbjct: 266 VKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVAR 325

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             FD M+  N+  WN+MIS Y   GY + A  LF +M S  I+ D IT            
Sbjct: 326 SFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSIT------------ 373

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                                  V   + A  ++  L   +    YI +     D++V T
Sbjct: 374 -----------------------VRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNT 410

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DM+ K   +  A+EVFD   ++++V W+++I GY   G   +A  +   M++  + P
Sbjct: 411 ALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCP 470

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           + V++  L++  +  G  +E   + H MK  GI      +  ++    ++ +  E+  F 
Sbjct: 471 NDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFI 530

Query: 692 IQMQQEDIKPNSTTMSSLLQTC 713
             M    I+P  +   +LL  C
Sbjct: 531 TTMP---IEPGVSVWGALLGAC 549



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 219/501 (43%), Gaps = 70/501 (13%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA L+  G      L    +N      ++  A K+F E  +     LWN II     +
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPE-PSVFLWNAIIRGYSSH 147

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             + +AI+++  MQ S       T+  +L+AC+ V     GK++HG + +   ES++ V 
Sbjct: 148 NFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQ 207

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L+++Y++  ++E A  VF+ + D N+ SW SMIS Y   G    A  +F +M    ++
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           PD   W  L+S                                VL+A T++  L+ G+  
Sbjct: 268 PD---WIALVS--------------------------------VLRAYTDVEDLEQGKSI 292

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           HG +++ GL+++  +  SL  MY K   +  A+  FD M+  N++ WN++ISGY   G  
Sbjct: 293 HGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYT 352

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ---------------------SKEAL 653
             A  +  +M  + I+ D ++  S +   +  G                         AL
Sbjct: 353 NEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTAL 412

Query: 654 V----------IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
           +          +   + +  +  +VV W+++I G   +   ++++  F  M+Q  + PN 
Sbjct: 413 IDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPND 472

Query: 704 TTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VF 761
            T   LL  C   GL++ G E+ H +       +  + A  ++D+  +SG+L  A + + 
Sbjct: 473 VTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYAC-VVDLLGRSGHLNEAYDFIT 531

Query: 762 RKSANKTLASWNCMIMGFAIY 782
                  ++ W  ++    IY
Sbjct: 532 TMPIEPGVSVWGALLGACKIY 552



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 105/266 (39%), Gaps = 59/266 (22%)

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           +IH   + +G ++  ++ T  ++     G +  AR+VF +    ++  WN +I G++ + 
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKN--------------------------- 816
              +AI ++  +  +G  PD  T   +L AC                             
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 817 --------SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF---IRT 865
                    G VE+    F+ +  D NI+     ++ M+   G+ G   EA      +R 
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLD-DRNIVS----WTSMISGYGQNGLPMEALRIFGQMRQ 263

Query: 866 MPFKPDATIWGALLGSCRIHGHLEYAEIAS-------RRLFKLEPCNSANYNLMMNLLAM 918
              KPD   W AL+   R +  +E  E          +   + EP      +L+++L AM
Sbjct: 264 RNVKPD---WIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEP------DLLISLTAM 314

Query: 919 SNRWEDVERLRHSMDEVGVKSVLVWS 944
             +   V   R   D++ + +V++W+
Sbjct: 315 YAKCGQVMVARSFFDQMEIPNVMMWN 340


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 261/789 (33%), Positives = 412/789 (52%), Gaps = 84/789 (10%)

Query: 293  RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG--KCRDVESANK 350
            RSR    ++  C+ L       + HA +I+ G   D +    L           +E A K
Sbjct: 30   RSRHTISLIDRCSSLRQL---KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARK 86

Query: 351  LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR--TIVKMLQACAK 408
            +F E+    +   WN +I           +I  F +M  S ++      T   +++A A+
Sbjct: 87   VFDEIPQ-PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAE 145

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
            V +   G+ +HG  +KSA+ S++ V N                               S+
Sbjct: 146  VSSLSLGQSLHGMAIKSAVGSDVFVAN-------------------------------SL 174

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            I  Y   G +D A  +F  +     + D+++WN +++G    GS    L L + M+S   
Sbjct: 175  IHCYFSCGDLDSACKVFTTIK----EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 230

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            + +  ++  VL A  ++R L++GR    YI  N ++ +L +  +++DMY K         
Sbjct: 231  KASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTK--------- 281

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
                                C  G   +AK++ + MEE+    D V+W +++ GY+I   
Sbjct: 282  --------------------C--GSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISED 315

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMS 707
             + A  +++ M       ++V W +LIS   QN    E+L  F ++Q Q++IK N  T+ 
Sbjct: 316  YEAAREVLNAMPKK----DIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLV 371

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            S L  C  +G L+ G+ IH    KNG   + YV + LI MYSK G+L+ AREVF     +
Sbjct: 372  STLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKR 431

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             +  W+ MI G A++G G EA+ +F+++ E   +P+ +TFT +  AC ++GLV+E    F
Sbjct: 432  DVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 491

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
              M + Y I+P  +HY+C+VD+LG++GYL++A  FI  MP  P  ++WGALLG+C+IH +
Sbjct: 492  YKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 551

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            L  AE+A  RL +LEP N   + L+ N+ A S +W++V  LR  M   G+K     S I+
Sbjct: 552  LSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIE 611

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE-KGKVLLS 1006
            ID ++H F +    HP + ++Y +L+ ++ ++K  GY P+   V Q I+EEE K + L  
Sbjct: 612  IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNL 671

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            H+EKLAI YGL+ T++   IRVIKN R+C DCH  AK +S +  REI +RD  RFHHFR 
Sbjct: 672  HSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRN 731

Query: 1067 GECSCNDCW 1075
            G+CSCND W
Sbjct: 732  GQCSCNDFW 740



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 165/380 (43%), Gaps = 38/380 (10%)

Query: 180 DTLAKQAQLSCISSGFCF---LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH 236
           D ++ ++Q  C  + + F   +    +   LS  +S H   IK   + +   +  SLI  
Sbjct: 121 DMVSSESQ--CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIK-SAVGSDVFVANSLIHC 177

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y   GD  SA K F     +    W+S +  +    G   + LE++ ++  + V      
Sbjct: 178 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ-KGSPDKALELFKKMESEDVKASHVT 236

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           +  +L  C K+     G  V + + +   + ++ L  A+++ Y KC  +E A +LF  + 
Sbjct: 237 MVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME 296

Query: 357 DLE------------------------------DDLLWNEIIMVKLRNEKWENAIKLFRE 386
           + +                              D + WN +I    +N K   A+ +F E
Sbjct: 297 EKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHE 356

Query: 387 MQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           +Q      +++ T+V  L ACA+VGA   G+ IH Y+ K+ ++ N  V + LI MYS+  
Sbjct: 357 LQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCG 416

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            LE A  VF+S++  ++  W++MI      G    A  +F KM  + ++P+ +T+  +  
Sbjct: 417 DLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFC 476

Query: 506 GHFTHGSYQNVLTLLRGMQS 525
                G      +L   M+S
Sbjct: 477 ACSHTGLVDEAESLFYKMES 496



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 26/310 (8%)

Query: 242 DFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELH-GKGVIFRSRILTII 300
           D+ +A +       +    W++ +  YE   G+  E L V+ EL   K +      L   
Sbjct: 315 DYEAAREVLNAMPKKDIVAWNALISAYEQ-NGKPNEALLVFHELQLQKNIKLNQITLVST 373

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L  C ++ A  LG  +H+ + K G   + ++  AL++ Y KC D+E A ++F+ V +  D
Sbjct: 374 LSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSV-EKRD 432

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
             +W+ +I     +     A+ +F +MQ ++ K    T   +  AC+  G   E +    
Sbjct: 433 VFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES--- 489

Query: 421 YVLKSALESNLSVC------NCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS-- 471
             L   +ES+  +        C++ +  R+  LE A +  ++M    + S W +++ +  
Sbjct: 490 --LFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 547

Query: 472 -YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFR 529
            +  L   ++A +   ++     +P     + LLS  +   G + NV  L + M+  G +
Sbjct: 548 IHANLSLAEMACTRLLEL-----EPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLK 602

Query: 530 --PNGSSVSV 537
             P  SS+ +
Sbjct: 603 KEPGCSSIEI 612


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Glycine max]
          Length = 673

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/660 (35%), Positives = 372/660 (56%), Gaps = 38/660 (5%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            K +H  V   +   N S+   L+  Y+   +  LA  VFD + + N+  +N MI SY   
Sbjct: 52   KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSY--- 108

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                        ++ H     Y + L + R M S GF P+  + 
Sbjct: 109  ----------------------------MNNHL----YDDALLVFRDMVSGGFSPDHYTY 136

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              VL+A +    L+ G + HG + + GLD +L+VG  L+ +Y K  CL  A+ V D M++
Sbjct: 137  PCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQS 196

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            +++V+WNS+++GY     F +A  +  +M+    KPD  +  SL+   ++   S E ++ 
Sbjct: 197  KDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLP--AVTNTSSENVLY 254

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
            +  M  +    ++V+W  +IS  ++N    +S+  ++QM + +++P++ T +S+L+ CG 
Sbjct: 255  VEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGD 314

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            L  L  G+ IH    +     +  +   LIDMY++ G L+ A+ VF +   + +ASW  +
Sbjct: 315  LSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSL 374

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I  + + G G  A+ LF E+  +G  PD+I F A+L+AC +SGL+ EG  YF  M+ DY 
Sbjct: 375  ISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYK 434

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P IEH++C+VDLLG++G +DEA++ I+ MP KP+  +WGALL SCR++ +++   +A+
Sbjct: 435  ITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAA 494

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
             +L +L P  S  Y L+ N+ A + RW +V  +R  M    ++ +   S ++++  VH F
Sbjct: 495  DKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTF 554

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    HP + EIY EL  LV +MK+LGYVP T     D++EE+K   L  H+EKLAIV+
Sbjct: 555  LAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVF 614

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             ++ T+  +PIR+ KN RVC DCH AAK +S +  REI +RD  RFHHF++G CSC D W
Sbjct: 615  AILNTQ-ESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 221/498 (44%), Gaps = 53/498 (10%)

Query: 298 TIILKLCTKLMAFWLGVE----VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
            ++L+L  K++  +  ++    VH+ +    F  +  L   LM  Y    +   A  +F 
Sbjct: 32  VLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFD 91

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
            + +  + + +N +I   + N  +++A+ +FR+M          T   +L+AC+      
Sbjct: 92  VIPE-RNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLR 150

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G Q+HG V K  L+ NL V N LI++Y +   L  A  V D M+  ++ SWNSM++ Y 
Sbjct: 151 IGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYA 210

Query: 474 GLGYVDVAWSLFNKMNSSRIQPD---------------------------------IITW 500
                D A  +  +M+  R +PD                                 +++W
Sbjct: 211 QNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSW 270

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
           N ++S +  +      + L   M      P+  + + VL+A  +L  L  GR  H Y+ R
Sbjct: 271 NVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVER 330

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
             L  ++ +  SL+DMY +  CL++A+ VFD MK R++ +W SLIS Y   G   NA  +
Sbjct: 331 KKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVAL 390

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSL 679
             +M+     PD +++ +++S  S  G   E       M +   I P +  +  L+    
Sbjct: 391 FTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLG 450

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG-----GLGLLQNGKEIHCLCLKNGF 734
           ++    E+     QM    +KPN     +LL +C       +G+L   K +     ++G+
Sbjct: 451 RSGRVDEAYNIIKQMP---MKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGY 507

Query: 735 IKDAYVATGLIDMYSKSG 752
               YV   L ++Y+K+G
Sbjct: 508 ----YVL--LSNIYAKAG 519



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 13/230 (5%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C  L A  LG  +H  + ++    ++ L+ +L++ Y +C  +E A ++F  +    
Sbjct: 308 VLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMK-FR 366

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK--- 416
           D   W  +I       +  NA+ LF EMQ S     S   V +L AC+  G  +EGK   
Sbjct: 367 DVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYF 426

Query: 417 --QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYT 473
                 Y +   +E       CL+ +  R+ +++ A  +   M    N   W +++SS  
Sbjct: 427 KQMTDDYKITPIIEH----FACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCR 482

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
               +D+     +K+   ++ P+   +  LLS  +        +T +R +
Sbjct: 483 VYSNMDIGILAADKL--LQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSL 530


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 271/848 (31%), Positives = 437/848 (51%), Gaps = 79/848 (9%)

Query: 232  SLIFHYLE--FGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
            SLI  Y +  +G    A   F     R+ A WS+ L  Y   G   +E + ++ ++ G G
Sbjct: 311  SLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVG-LYEEAVGLFCQMWGLG 369

Query: 290  VIFRSRILTIILKLCTK--LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
            V     ++  ++  C++   MA   G +VH  ++K G   DV++  AL++FYG    V +
Sbjct: 370  VEPNGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 428

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A KLF E+ D  + + W  +++    +      + +++ M+         T   +  +C 
Sbjct: 429  AQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 487

Query: 408  KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
             +     G Q+ G++++   E ++SV N LISM+S           F S           
Sbjct: 488  LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS----------FSS----------- 526

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
                      V+ A  +F+ MN    + DII+WN ++S +  HG  +  L     M+ L 
Sbjct: 527  ----------VEEACYVFDHMN----ECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 572

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
               N +++S +L   + +  LK+GR  HG +++ GLD ++ +  +L+ +Y +    ++A+
Sbjct: 573  NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 632

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
             VF  M  R                                   DL+SWNS+++ Y   G
Sbjct: 633  LVFQAMTER-----------------------------------DLISWNSMMACYVQDG 657

Query: 648  QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
            +  + L I+  +   G  P+ VTW +LI G  +NE   E++K +  ++++ I  N  TM 
Sbjct: 658  KCLDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMV 716

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            SL  T   L +L+ G+++H L +K GF  D +V    +DMY K G +    ++  +  N+
Sbjct: 717  SLAAT-ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINR 775

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
            +  SWN +I  FA +G  ++A   FHE+L+ G +PD +TF +LL+AC + GLV+EG  Y+
Sbjct: 776  SRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYY 835

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            DSM+ ++ + P IEH  C++DLLG++G L  A  FI+ MP  P+   W +LL +CRIHG+
Sbjct: 836  DSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGN 895

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            LE A   +  L +L+P + + Y L  N+ A S +WEDVE LR  M    +K     SW++
Sbjct: 896  LELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVK 955

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +   VH F      HP    I  +L  L+   K+ GYVPDT     D+DEE+K   L +H
Sbjct: 956  LKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNH 1015

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +E+LA+ +GL+ T   + +R+ KN RVC DCH+  K++S + GR+I LRD  RFHHF  G
Sbjct: 1016 SERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGG 1075

Query: 1068 ECSCNDCW 1075
            +CSC D W
Sbjct: 1076 KCSCGDYW 1083



 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 176/692 (25%), Positives = 300/692 (43%), Gaps = 137/692 (19%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL++F+ KC  +E A+ LF  + +  D + WN +I         +++  +FR M      
Sbjct: 132 ALVDFHSKCGKMEDASYLFGTMME-RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV 190

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYV------------------------LKSA--- 426
               T+  +L+A A+ G      QIHG +                        L+SA   
Sbjct: 191 PDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDL 250

Query: 427 ----LESNL----------------SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
               L+ +L                ++ N LI MY+++ ++E A R FD M++ N+ SW 
Sbjct: 251 RKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWT 310

Query: 467 SMISSYT--GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           S+IS Y   G G++  A  +F++M       +  +W+ +LSG+   G Y+  + L   M 
Sbjct: 311 SLISGYAKHGYGHMAHARYVFDEMR----HRNEASWSTMLSGYVRVGLYEEAVGLFCQMW 366

Query: 525 SLGFRPNGSSVSVVLQAVTELRLL-KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            LG  PNG  V+ ++ A +    +   G + HG++++ G+  D+YVGT+L+  Y     +
Sbjct: 367 GLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLV 426

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN---QMEEEEIK---------- 630
            NAQ++F+ M + N+V+W SL+ GY   G   N  ++LN   +M +E +           
Sbjct: 427 YNAQKLFEEMPDHNVVSWTSLMVGYSDSG---NPGEVLNVYQRMRQEGVSGNQNTFATVT 483

Query: 631 ------------------------PDLVS-WNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
                                    D VS  NSL+S +S +   +EA  +  HM      
Sbjct: 484 SSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC--- 540

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            ++++W ++IS    +   RESL+ F  M+    + NSTT+SSLL  C  +  L+ G+ I
Sbjct: 541 -DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI 599

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
           H L +K G   +  +   L+ +YS++G  + A  VF+    + L SWN M+  +   G  
Sbjct: 600 HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKC 659

Query: 786 KEAILLFHELLETGFQPDAITFTAL----------------------------------L 811
            + + +  ELL+ G +PD +T+ AL                                  L
Sbjct: 660 LDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSL 718

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
           AA  N  ++EEG +    +         +   +  +D+ GK G + +    +   P    
Sbjct: 719 AATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML-PQPINRS 776

Query: 872 ATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
              W  L+ +   HG  + A      + KL P
Sbjct: 777 RLSWNILISAFARHGCFQKARETFHEMLKLGP 808



 Score =  182 bits (463), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 127/537 (23%), Positives = 254/537 (47%), Gaps = 64/537 (11%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           +K+LQ C    A  +G  IH +++ +   S+L +   LI  Y +   +  A  VFD M +
Sbjct: 34  LKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPE 93

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMN---------------------------SSR 492
            ++ SW +M+S Y+  G  + A+ LF+ M                             + 
Sbjct: 94  RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDASYLFGTM 153

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++ D+++WN ++ G+   G   +   + R M   G  P+  ++  VL+A  E   L    
Sbjct: 154 MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIAN 213

Query: 553 ESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           + HG I + G   YD+  G  L++ Y KN  L++A+++   M  +++ +  +LI+GY  +
Sbjct: 214 QIHGIITQLGYGSYDIVTGL-LINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHE 272

Query: 612 GLFV----------------NAKKMLNQMEEEEIKPDLVSWNSLVSGYSI--WGQSKEAL 653
           G++                 +AK+  ++MEE+ +    +SW SL+SGY+   +G    A 
Sbjct: 273 GIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNV----ISWTSLISGYAKHGYGHMAHAR 328

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +   M+    + N  +W++++SG ++   Y E++  F QM    ++PN   ++SL+  C
Sbjct: 329 YVFDEMR----HRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITAC 384

Query: 714 GGLGLLQN-GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
              G + + G ++H   +K G + D YV T L+  Y   G + +A+++F +  +  + SW
Sbjct: 385 SRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSW 444

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE---GWKYFDS 829
             +++G++  GN  E + ++  + + G   +  TF  + ++C   GL+E+   G++    
Sbjct: 445 TSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGH 501

Query: 830 MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           +   Y    ++   + ++ +      ++EA      M  + D   W A++ +   HG
Sbjct: 502 I-IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHHG 556


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/809 (31%), Positives = 419/809 (51%), Gaps = 70/809 (8%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA-LMNFYGKCRDVESANKLFSEVSDL 358
            +L+ C+       G  VH  +  RGF+ + +L C  L+  Y +C  V  A ++F E+ + 
Sbjct: 10   LLQRCSSAKNVDHGRRVHWHVRDRGFEQN-NLVCGHLIQMYAQCGSVPEAQQVF-EILER 67

Query: 359  EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            +D   W  +I +  +   ++ A+ +F +MQ         T V +L ACA   +  +G +I
Sbjct: 68   KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEI 127

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            HG +L+   E ++ V   LI+MY++   +  A   F  ++  ++ SW +MI++       
Sbjct: 128  HGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA------- 180

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                                   C+    F    +     L R MQ  G  PN  ++  V
Sbjct: 181  -----------------------CVQHDQFALARW-----LYRRMQLDGVVPNKITLYTV 212

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
              A  +   L  G+  +G +    ++ D+ V  S ++M+     L +A+ +F++M +R++
Sbjct: 213  FNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDV 272

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------NSLVSGYSI--- 645
            V WN +I+ Y     F  A ++  +++++ +K + +++           SL  G  I   
Sbjct: 273  VTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHEL 332

Query: 646  ---WGQSKEALVIIHHMKNSG----------IY-----PNVVTWTSLISGSLQNENYRES 687
                G  ++A+V    M   G          I+      +V+TWT +     QN   +E+
Sbjct: 333  VKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEA 392

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            L+ F +MQ E  +P S T+ ++L TC  L  LQ G++IH   ++N F  +  V T LI+M
Sbjct: 393  LQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINM 452

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y K G +  A  VF K A + +  WN M+  +A +G   E + LF+++   G + DA++F
Sbjct: 453  YGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSF 512

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
             ++L+A  +SG V +G++YF +M  D++I PT E Y C+VDLLG+AG + EA D +  + 
Sbjct: 513  VSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLS 572

Query: 868  -FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
               PD  +W  LLG+CR H   + A+ A+ ++ + +P +S  Y ++ N+ A +  W+ V 
Sbjct: 573  GCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVN 632

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            R+R  M   GVK     S I+I   VH F      HP    IY EL  L SEM+  GY+P
Sbjct: 633  RMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIP 692

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            DT+ +  D+++E K  +L  H+E+LAI +GL+ T    P+RVIKN RVCSDCHTA KY+S
Sbjct: 693  DTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYIS 752

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +RGREI +RD  RFH+F++G CSC D W
Sbjct: 753  KLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 240/522 (45%), Gaps = 70/522 (13%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           V +LQ C+       G+++H +V     E N  VC  LI MY++   +  A +VF+ ++ 
Sbjct: 8   VALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILER 67

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            ++ +W  MI  Y   G  D A  +F +M    + P  +T+                   
Sbjct: 68  KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTY------------------- 108

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
                             +L A      LK G E HG IL+ G + D++VGT+L++MY K
Sbjct: 109 ----------------VAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNK 152

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--- 636
              ++ A + F  +++R++V+W ++I+       F  A+ +  +M+ + + P+ ++    
Sbjct: 153 CGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTV 212

Query: 637 -------NSLVSGYSIWGQSKEALV---------IIHHMKNSGIY------------PNV 668
                  N L  G  ++G     ++          ++   N+G+              +V
Sbjct: 213 FNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDV 272

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           VTW  +I+  +QNEN+ E+++ F ++QQ+ +K N  T   +L     L  L  GK IH L
Sbjct: 273 VTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHEL 332

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             + G+ +DA VAT L+ +Y +      A ++F    +K + +W  M + +A  G  KEA
Sbjct: 333 VKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEA 392

Query: 789 ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS-MSTDYNIIPTIEHYSCMV 847
           + LF E+   G +P + T  A+L  C +   +++G +     +   + +   +E  + ++
Sbjct: 393 LQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALI 450

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLE 889
           ++ GK G + EA      M  K D  +W ++LG+   HG+ +
Sbjct: 451 NMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGAYAQHGYYD 491



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/567 (21%), Positives = 233/567 (41%), Gaps = 77/567 (13%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y + G    A + F +   +    W+  +  Y    G+    L ++ ++  + V+ 
Sbjct: 45  LIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQ-QGDYDRALGMFYQMQEEDVMP 103

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
                  IL  C    +   G+E+H  ++++GF+ DV +  AL+N Y KC  V  A   F
Sbjct: 104 TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSF 163

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             + +  D + W  +I   ++++++  A  L+R MQ         T+  +  A       
Sbjct: 164 KRL-EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYL 222

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            EGK ++G V    +ES++ V N  ++M+     L  A R+F+ M D ++ +WN +I+ Y
Sbjct: 223 SEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLY 282

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                   A  LF      R+Q D                              G + N 
Sbjct: 283 VQNENFGEAVRLF-----GRLQQD------------------------------GVKAND 307

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            +  ++L   T L  L  G+  H  +   G D D  V T+LM +Y + +    A ++F +
Sbjct: 308 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVD 367

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--------------------- 631
           M +++++ W  +   Y   G    A ++  +M+ E  +P                     
Sbjct: 368 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 427

Query: 632 --------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                         ++V   +L++ Y   G+  EA+ +   M       +++ W S++  
Sbjct: 428 RQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKR----DILVWNSMLGA 483

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             Q+  Y E+L+ F QMQ + +K ++ +  S+L      G + +G +     L++  I  
Sbjct: 484 YAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITP 543

Query: 738 AYVATG-LIDMYSKSGNLKSAREVFRK 763
                G ++D+  ++G ++ A ++  K
Sbjct: 544 TPELYGCVVDLLGRAGRIQEAVDIVLK 570



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 144/314 (45%), Gaps = 31/314 (9%)

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           +P+ +    +LQ  +  + + +GR  H ++   G + +  V   L+ MY +   +  AQ+
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------NS 638
           VF+ ++ +++ AW  +I  YC +G +  A  M  QM+EE++ P  V++           S
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 639 LVSGYSIWGQSKE---------ALVIIHHMKNSGI------------YPNVVTWTSLISG 677
           L  G  I GQ  +            +I+     G             + +VV+WT++I+ 
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
            +Q++ +  +   + +MQ + + PN  T+ ++    G    L  GK ++ L        D
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             V    ++M+  +G L  AR +F    ++ + +WN +I  +    N  EA+ LF  L +
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300

Query: 798 TGFQPDAITFTALL 811
            G + + ITF  +L
Sbjct: 301 DGVKANDITFVLML 314



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 2/199 (1%)

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           KP++    +LLQ C     + +G+ +H      GF ++  V   LI MY++ G++  A++
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VF     K + +W  MI  +   G+   A+ +F+++ E    P  +T+ A+L AC ++  
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           +++G +    +         +   + ++++  K G +  AWD  + +  + D   W A++
Sbjct: 121 LKDGMEIHGQI-LQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMI 178

Query: 880 GSCRIHGHLEYAEIASRRL 898
            +C  H     A    RR+
Sbjct: 179 AACVQHDQFALARWLYRRM 197


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 674

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/643 (34%), Positives = 362/643 (56%), Gaps = 55/643 (8%)

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            + +++  P  + W C++  + +HG  ++ L     ++S G  P+      +L+A T  + 
Sbjct: 32   VKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKH 91

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVK----------------------NDCLQN 585
                +  H  ++R G  +DLY   +LM+MY K                      +  + +
Sbjct: 92   FNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDS 151

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL------ 639
             +++FD M  R++V+WN++I+G    G++  A  M+ +M +E ++PD  + +S+      
Sbjct: 152  VRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTE 211

Query: 640  ---------VSGYSI-WGQSKEALV----IIHHMKNSGIYPNV-----------VTWTSL 674
                     + GY+I  G  K+  +    I  + K + +  +V           ++W S+
Sbjct: 212  HANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSI 271

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+G +QN  + + L FF +M +E +KP   + SS++  C  L  L  GK++H   ++ GF
Sbjct: 272  IAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGF 331

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRK--SANKTLASWNCMIMGFAIYGNGKEAILLF 792
              + ++A+ L+DMY+K GN+K AR +F K    ++ + SW  +IMG A++G+  +A+ LF
Sbjct: 332  DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLF 391

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             E+L  G +P  + F A+L AC ++GLV+EGWKYF+SM  D+ + P +EHY+ + DLLG+
Sbjct: 392  EEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGR 451

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG L+EA+DFI  M  +P  ++W  LL +CR H ++E AE    ++  ++P N   + +M
Sbjct: 452  AGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIM 511

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ + + RW D  +LR  M + G+K     SWI++   VH F A    HP   +I   L
Sbjct: 512  SNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEAL 571

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L+ +M+K GYV DT  V  D+DEE K  +L +H+E+LAI +G++ T S   IRVIKN 
Sbjct: 572  NILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNI 631

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCHTA K+M+ + GREI +RD +RFHHF+ G CSC D W
Sbjct: 632  RVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 212/478 (44%), Gaps = 65/478 (13%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W   ++ Y S G  ++  L  +  L   G+     +   +L+  T    F L   +HA++
Sbjct: 44  WICIIKCYASHG-LLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAV 102

Query: 321 IKRGFDFDVHLKCALMNFYGKCR----------------------DVESANKLFSEVSDL 358
           I+ GF FD++   ALMN Y K                         ++S  KLF  +  +
Sbjct: 103 IRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP-V 161

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            D + WN +I    +N  +E A+ + +EM   + +  S T+  +L    +     +GK+I
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           HGY ++   + ++ + + LI MY++  ++EL+   F  + + +  SWNS+I+        
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAG------- 274

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                                  C+ +G F  G     L   R M     +P   S S V
Sbjct: 275 -----------------------CVQNGRFDQG-----LGFFRRMLKEKVKPMQVSFSSV 306

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN--MKNR 596
           + A   L  L  G++ H YI+R G D + ++ +SL+DMY K   ++ A+ +F+   M +R
Sbjct: 307 IPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDR 366

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           ++V+W ++I G    G  ++A  +  +M  + +KP  V++ ++++  S  G   E     
Sbjct: 367 DMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYF 426

Query: 657 HHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + M ++ G+ P +  + ++     +     E+  F   M +E   P  +  S+LL  C
Sbjct: 427 NSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEE---PTGSVWSTLLAAC 481



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 191/425 (44%), Gaps = 62/425 (14%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L+A      F+  + +H  V++     +L   N L++MYS+ +        F   + HN
Sbjct: 82  LLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQAR-HN 140

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            ++  S+         +D    LF++M       D+++WN +++G+  +G Y+  L +++
Sbjct: 141 HNNKYSV--------KIDSVRKLFDRMPVR----DVVSWNTVIAGNAQNGMYEEALNMVK 188

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M     RP+  ++S +L   TE   +  G+E HGY +R+G D D+++G+SL+DMY K  
Sbjct: 189 EMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCT 248

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            ++ +   F  + NR+ ++WNS+I+G    G F        +M +E++KP  VS++S++ 
Sbjct: 249 QVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIP 308

Query: 642 G-----------------------------------YSIWGQSKEALVIIHHMKNSGIYP 666
                                               Y+  G  K A  I + ++      
Sbjct: 309 ACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCD--R 366

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           ++V+WT++I G   + +  +++  F +M  + +KP      ++L  C   GL+  G +  
Sbjct: 367 DMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYF 426

Query: 727 CLCLKNGFIKDAYVATGL------IDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGF 779
                N   +D  VA GL       D+  ++G L+ A +       +   S W+ ++   
Sbjct: 427 -----NSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAAC 481

Query: 780 AIYGN 784
             + N
Sbjct: 482 RAHKN 486


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/736 (35%), Positives = 380/736 (51%), Gaps = 79/736 (10%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            AI L+R M          T   +L+AC+ +     G+ IH +   + L ++L V   LI 
Sbjct: 84   AIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALID 143

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            +Y R  +   A  VF  M                                      D++ 
Sbjct: 144  LYIRCARFGPARNVFAKMP-----------------------------------MRDVVA 168

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            WN +L+G+  HG Y + +  L  MQ  G  RPN S++  +L  + +   L  G   H Y 
Sbjct: 169  WNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYC 228

Query: 559  LRNGLDYD---LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC------ 609
            LR  L+ +   + +GT+L+DMY K   L  A  VF  M  RN V W++LI G+       
Sbjct: 229  LRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMT 288

Query: 610  -----FKGLFVNAKKMLNQ-------------------------MEEEEIKPDLVSWNSL 639
                 FK + V     L+                          + +  I  DL + NSL
Sbjct: 289  EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            +S Y+  G   EA +    +       + +++ +L+SG +QN    E+   F +MQ  ++
Sbjct: 349  LSMYAKAGLINEATMFFDEIA----VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            +P+  TM SL+  C  L  LQ+GK  H   +  G   +  +   LIDMY+K G +  +R+
Sbjct: 405  EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF K   + + SWN MI G+ I+G GKEA  LF  +   GF PD +TF  L+AAC +SGL
Sbjct: 465  VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            V EG  +FD+M+  Y I+P +EHY CMVDLL + G LDEA+ FI++MP K D  +WGALL
Sbjct: 525  VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
            G+CRIH +++  +  SR + KL P  + N+ L+ N+ + + R+++   +R      G K 
Sbjct: 585  GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
               +SWI+I+  +H F      HP + +IY EL +++ ++KKLGY  DT  V QD++EEE
Sbjct: 645  SPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEE 704

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K K LL H+EKLAI +G++       I V KN RVC DCHTA KYM+LVR R I +RD  
Sbjct: 705  KEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTN 764

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF+ G+CSC + W
Sbjct: 765  RFHHFKNGQCSCGNFW 780



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 227/541 (41%), Gaps = 93/541 (17%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C+ L+    G  +HA     G   D+ +  AL++ Y +C     A  +F+++  + 
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP-MR 164

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQ-FSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
           D + WN ++     +  + +AI    +MQ     +  + T+V +L   A+ GA  +G  I
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224

Query: 419 HGYVLKSALESN---LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           H Y L++ LE N   + +   L+ MY++  +L  A RVF  M   N  +W+++I  +   
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLC 284

Query: 476 GYVDVAWSLFNKM------------------------------------NSSRIQPDIIT 499
             +  A++LF  M                                      S I  D+  
Sbjct: 285 DRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTA 344

Query: 500 WNCLLS-------------------------------GHFTHGSYQNVLTLLRGMQSLGF 528
            N LLS                               G   +G  +    + + MQ+   
Sbjct: 345 SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            P+ +++  ++ A + L  L++G+ SHG ++  GL  +  +  SL+DMY K   +  +++
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VFD M  R++V+WN++I+GY   GL   A  +   M+ +   PD V++  L++  S  G 
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 649 SKEALVIIHHMKNS-GIYPNVVTWTSLIS----GSLQNENYRESLKFFIQMQQEDIKPNS 703
             E       M +  GI P +  +  ++     G L +E Y+     FIQ     +K + 
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQ-----FIQSMP--LKADV 577

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG----LIDMYSKSGNLKSARE 759
               +LL  C     +  GK++  +  K G        TG    L +++S +G    A E
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLG-----PEGTGNFVLLSNIFSAAGRFDEAAE 632

Query: 760 V 760
           V
Sbjct: 633 V 633



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 174/377 (46%), Gaps = 31/377 (8%)

Query: 143 HSIYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETN 202
           H +YHH        Q+    +PN+     T ++L P   LA+   L        F   + 
Sbjct: 179 HGMYHHAIAHLLDMQDHGGLRPNA----STLVSLLPL--LAQHGAL--------FQGTSI 224

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
              CL +   ++ + + +G          +L+  Y +      A + F     R+   WS
Sbjct: 225 HAYCLRACLEQNEEQVLIGT---------ALLDMYAKCKQLVYACRVFHGMPVRNDVTWS 275

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLI 321
           + +  +      + E   ++ ++  +G+ F S   +   L++C  L    +G ++HA + 
Sbjct: 276 ALIGGF-VLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIA 334

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           K G   D+    +L++ Y K   +  A   F E++ ++D + +  ++   ++N K E A 
Sbjct: 335 KSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA-VKDTISYGALLSGCVQNGKAEEAF 393

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            +F++MQ  + +    T+V ++ AC+ + A   GK  HG V+   L    S+CN LI MY
Sbjct: 394 LVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMY 453

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           ++  K++L+ +VFD M   ++ SWN+MI+ Y   G    A +LF  M +    PD +T+ 
Sbjct: 454 AKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFI 513

Query: 502 CLL-----SGHFTHGSY 513
           CL+     SG  T G +
Sbjct: 514 CLIAACSHSGLVTEGKH 530


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/667 (34%), Positives = 370/667 (55%), Gaps = 74/667 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            Y+ +  +  +  LFN ++     P  + W  ++  + +HG     L    GM + G  P+
Sbjct: 50   YSHINLLHDSLRLFNTIHF----PPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPD 105

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ------- 584
             +    VL++   L  L  G   HGYI+R GLD+DLY G +LM+MY K   L+       
Sbjct: 106  HNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRL 165

Query: 585  NAQEVFDNMKNR-------------------------NIVAWNSLISGYCFKGLFVNAKK 619
             A EVFD M  R                         ++V+WN++I+G    GL+    +
Sbjct: 166  GAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225

Query: 620  MLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQS-KEAL---------VIIHHM 659
            M+ +M    +KPD  + +S++           G  I G S ++ L         +I  + 
Sbjct: 226  MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYA 285

Query: 660  KNSGIYPNV-----------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            K + +  +            ++W S+I+G +QN  + E L+FF QM    IKP S + SS
Sbjct: 286  KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            ++  C  L  L  GK++H    +NGF ++ ++A+ L+DMY+K GN+++A+++F +   + 
Sbjct: 346  IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            + SW  MIMG A++G   +AI LF ++   G +       A+L AC + GLV+E WKYF+
Sbjct: 406  MVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFN 458

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            SM+ D+ I P +EHY+ + DLLG+AG L+EA+DFI  M   P  +IW  LL +CR+H ++
Sbjct: 459  SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNI 518

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
            + AE  + R+ +++P N+  Y L+ N+ + + RW++  + R SM  +G++     SWI++
Sbjct: 519  DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 578

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
               V+ F A    HP   +I   +  LV  M+K GYVPDT  V+ D++EE+K  ++ SH+
Sbjct: 579  KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHS 638

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            E+LAIV+G++ T +   IRV KN RVC+DCHTA K++S + GREI +RD +RFHHF+ G 
Sbjct: 639  ERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 698

Query: 1069 CSCNDCW 1075
            CSC D W
Sbjct: 699  CSCGDYW 705



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 238/539 (44%), Gaps = 82/539 (15%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF-FLYFSRSYADWSSFLE 266
           S  +  HAQ++K       +  +   I+ ++       + + F  ++F  + A W S + 
Sbjct: 23  SQAQQLHAQVLKFQASSLCNLSLLLSIYSHINL--LHDSLRLFNTIHFPPALA-WKSVIR 79

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y S G   Q L    G L   G+     +   +LK C  LM   LG  +H  +I+ G D
Sbjct: 80  CYTSHGLPHQSLGSFIGML-ASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLD 138

Query: 327 FDVHLKCALMNFYGKCRDVE-------SANKLFSEVSDL--------------------- 358
           FD++   ALMN Y K R +E        A ++F E+++                      
Sbjct: 139 FDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEM 198

Query: 359 --EDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
             E DL+ WN II    RN  +E  +++ REM  ++ K  S T+  +L   A+      G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           K+IHG  ++  L++++ V + LI MY++  ++  + RVF  + +                
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTER--------------- 303

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                               D I+WN +++G   +G +   L   R M     +P   S 
Sbjct: 304 --------------------DGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSF 343

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           S ++ A   L  L  G++ HGYI RNG D ++++ +SL+DMY K   ++ A+++FD M+ 
Sbjct: 344 SSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRL 403

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
           R++V+W ++I G    G   +A ++  QME E IK       ++++  S  G   EA   
Sbjct: 404 RDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKY 456

Query: 656 IHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            + M ++ GI P V  + ++     +     E+  F   M    I P  +  ++LL  C
Sbjct: 457 FNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH---IGPTGSIWATLLSAC 512



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 185/404 (45%), Gaps = 74/404 (18%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR-------VF 454
           +L++CA +   + G+ +HGY+++  L+ +L   N L++MYS+   LE + R       VF
Sbjct: 112 VLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVF 171

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D M +   S     + S       D    +F  M     + D+++WN +++G+  +G Y+
Sbjct: 172 DEMTERTRSVRTVSVLSE------DSVRKIFEMMP----EKDLVSWNTIIAGNARNGLYE 221

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
             L ++R M     +P+  ++S VL  + E   +  G+E HG  +R GLD D+YV +SL+
Sbjct: 222 ETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLI 281

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           DMY K   + ++  VF  +  R+ ++WNS+I+G    GLF    +   QM   +IKP   
Sbjct: 282 DMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSY 341

Query: 635 SW-----------------------------------NSLVSGYSIWGQSKEALVIIHHM 659
           S+                                   +SLV  Y+  G  + A  I   M
Sbjct: 342 SFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
           +      ++V+WT++I G   +    ++++ F QM+ E IK       ++L  C   GL+
Sbjct: 402 R----LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLV 450

Query: 720 QNGKEIHCLCLKNGFIKDAYVATG------LIDMYSKSGNLKSA 757
               +       N   +D  +A G      + D+  ++G L+ A
Sbjct: 451 DEAWKYF-----NSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 253/798 (31%), Positives = 408/798 (51%), Gaps = 69/798 (8%)

Query: 312  LGVEVHASLI-KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
            LG  +H  L+     D D  +  +L+  Y KC  V +A ++F  +  L D + W  +   
Sbjct: 61   LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 371  KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE-GKQIHGYVLKSAL-E 428
              RN   + A+ L  EM  S  +  + T+     AC     F   G  + G+ +K+    
Sbjct: 121  LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            +++SV   LI M++RN  L  A +VF+ +                               
Sbjct: 181  TDVSVGCALIDMFARNGDLVAARKVFNGL------------------------------- 209

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                ++  ++ W  +++ +   G     + L  GM   GF P+G ++S ++ A  E    
Sbjct: 210  ----VERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSA 265

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDNMKNRNIVAWNSLI 605
              G++ H  +LR GL  D  V   L+DMY K      ++ A++VF  M   N+++W +LI
Sbjct: 266  GLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALI 325

Query: 606  SGYC-FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHM 659
            SGY    G   NA ++L +M  E I+P+ ++++SL+   +       G+   A V+   +
Sbjct: 326  SGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSI 385

Query: 660  KNSGIYPNVVTWTSLISGSLQ---------------------NENYRESLKFFIQMQQED 698
             N  +  N +      SG ++                      E  R +  +  Q++  D
Sbjct: 386  GNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMD 445

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            +  ++ T +SLL     +GL   G+++H L +K GF  D  ++  L+ MYS+ G L  A 
Sbjct: 446  VGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDAC 505

Query: 759  EVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
              F +   +  + SW  +I   A +G+ + A+ LFH+++ +G +P+ +T+ A+L+AC + 
Sbjct: 506  RAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHV 565

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLV+EG +YF SM  D+ +IP +EHY+CMVDLL ++G + EA +FI  MP K DA +W  
Sbjct: 566  GLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKT 625

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+CR + ++E  EIA+R +  LEP + A Y L+ NL A    W++V R+R  M    +
Sbjct: 626  LLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNL 685

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
                  SW+ +   +H F A    HP   EIY +L  L+ E+K +GYVPDT  V  D+ +
Sbjct: 686  SKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSD 745

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            + K + LL H+EK+A+ +GL+ T    PIR+ KN RVC+DCH+A KY+S   GREI LRD
Sbjct: 746  KLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRD 805

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFH  ++G+CSC + W
Sbjct: 806  SNRFHRMKDGKCSCGEYW 823



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 116/495 (23%), Positives = 206/495 (41%), Gaps = 89/495 (17%)

Query: 190 CISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAK 248
           C ++  CF  E   FR  SS  +     IK G  W +D  V  +LI  +   GD  +A K
Sbjct: 150 CAAAHACFPGEL--FR--SSGGTVLGFAIKTG-FWGTDVSVGCALIDMFARNGDLVAARK 204

Query: 249 AFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLM 308
            F     R+   W+  +  Y   GG   + +E++  +   G       ++ ++  C +  
Sbjct: 205 VFNGLVERTVVVWTLMITRYVQ-GGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQG 263

Query: 309 AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR---DVESANKLFSEVSDLEDDLLWN 365
           +  LG ++H+ +++ G   D  + C L++ Y K +    +E A K+F  +    + + W 
Sbjct: 264 SAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPT-HNVMSWT 322

Query: 366 EIIMVKLRNEKWEN-AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            +I   ++    EN A++L  EM   S +    T   +L+ACA +     G+QIH  V+K
Sbjct: 323 ALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMK 382

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL--------------SSWNSMIS 470
           +++ +   V N L+SMY+ +  +E A + FD + + NL              +SW+S I 
Sbjct: 383 TSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIE 442

Query: 471 S---------------------------------------------------YTGLGYVD 479
           S                                                   Y+  GY+D
Sbjct: 443 SMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLD 502

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A   F++M       ++I+W  ++S    HG  +  L+L   M   G +PN  +   VL
Sbjct: 503 DACRAFDEMEDDH---NVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVL 559

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVG----TSLMDMYVKNDCLQNAQEVFDNMKN 595
            A + + L+K G+E   Y      D+ L         ++D+  ++  +Q A E  + M  
Sbjct: 560 SACSHVGLVKEGKE---YFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPC 616

Query: 596 R-NIVAWNSLISGYC 609
           + + + W +L+ G C
Sbjct: 617 KADALVWKTLL-GAC 630


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 292/911 (32%), Positives = 458/911 (50%), Gaps = 115/911 (12%)

Query: 208  SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
            S+ +S H   +K+G  W+   +  +L+  Y +FG    A   F     R    W+  ++ 
Sbjct: 744  SAAESLHGYAVKIGLQWDVF-VAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKA 802

Query: 268  YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
            Y   G E + LL ++ E +  G+  R   +T    LCT            A ++K   + 
Sbjct: 803  YVDTGLEYEALL-LFSEFNRTGL--RPDDVT----LCTL-----------ARVVKSKQNV 844

Query: 328  DVHLKCALMNFYGKCRDVESANKLF--SEVSDLEDDLLWNEIIMVKL-RNEKWENAIKLF 384
             +  +   +  YG         KLF   +  D  D + WN+ +   L R E WE A+  F
Sbjct: 845  -LEWQLKQLKAYG--------TKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWE-AVDCF 894

Query: 385  REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
             +M  S       T V ML   A +     GKQIHG V++S L+  +SV NCLI+MY + 
Sbjct: 895  VDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKT 954

Query: 445  NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
                                           G V  A ++F +MN    + D+++WN ++
Sbjct: 955  -------------------------------GSVSRARTVFWQMN----EVDLVSWNTMI 979

Query: 505  SGHFTHG----SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL-LKYGRESHGYIL 559
            SG    G    S    + LLRG    G  P+  +V+ VL+A + L        + H   +
Sbjct: 980  SGCALSGLEECSVGMFVDLLRG----GLLPDQFTVASVLRACSSLGGGCHLATQIHACAM 1035

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            + G+  D +V T+L+D+Y K+  ++ A+ +F N    ++ +WN+++ GY   G F  A +
Sbjct: 1036 KAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALR 1095

Query: 620  MLNQMEE--------------------------EEIKP---------DLVSWNSLVSGYS 644
            +   M+E                          ++I+          DL   + ++  Y 
Sbjct: 1096 LYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYL 1155

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G+ + A  I + + +    P+ V WT++ISG ++N     +L  +  M+   ++P+  
Sbjct: 1156 KCGEMESARRIFNEIPS----PDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEY 1211

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T ++L++ C  L  L+ G++IH   +K     D +V T L+DMY+K GN++ AR +F+++
Sbjct: 1212 TFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRT 1271

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
                +ASWN MI+G A +GN +EA+  F E+   G  PD +TF  +L+AC +SGLV E +
Sbjct: 1272 NTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAY 1331

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            + F SM   Y I P IEHYSC+VD L +AG + EA   I +MPF+  A+++  LL +CR+
Sbjct: 1332 ENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRV 1391

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
                E  +  + +L  LEP +SA Y L+ N+ A +N+WE+V   R+ M +  VK    +S
Sbjct: 1392 QVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFS 1451

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            W+ +   VH+F A    H  T  IY ++ +++  +++ GY+PDT     D++EE+K   L
Sbjct: 1452 WVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSL 1511

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+EKLAI YGLMKT     +RVIKN RVC DCH A KY+S V  RE+ LRD  RFHHF
Sbjct: 1512 YYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHF 1571

Query: 1065 REGECSCNDCW 1075
            R G CSC D W
Sbjct: 1572 RSGVCSCGDYW 1582



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 165/669 (24%), Positives = 291/669 (43%), Gaps = 82/669 (12%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            IL+         LG   HA ++  G   D  L   L+  Y KC  + SA KLF    D  
Sbjct: 632  ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691

Query: 360  DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
             DL+ WN I+      +K  +   LFR ++ S   A   T+  + + C    +    + +
Sbjct: 692  RDLVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            HGY +K  L+ ++ V   L+++Y++  ++  A  +FD M   ++  WN M+ +Y   G  
Sbjct: 750  HGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLE 809

Query: 479  DVAWSLFNKMNSSRIQP------------------------------------------- 495
              A  LF++ N + ++P                                           
Sbjct: 810  YEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGS 869

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D+I WN  LS     G     +     M +     +G +  V+L  V  L  L+ G++ H
Sbjct: 870  DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            G ++R+GLD  + VG  L++MYVK   +  A+ VF  M   ++V+WN++ISG    GL  
Sbjct: 930  GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH--HMKNSGIYPNVV---- 669
             +  M   +    + PD  +  S++   S  G        IH   MK   +  + V    
Sbjct: 990  CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049

Query: 670  --------------------------TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                                      +W +++ G + + ++ ++L+ +I MQ+   + N 
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             T+++  +  GGL  L+ GK+I  + +K GF  D +V +G++DMY K G ++SAR +F +
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNE 1169

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +    +W  MI G    G  + A+  +H +  +  QPD  TF  L+ AC     +E+G
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229

Query: 824  WK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
             + + +++  +    P +   + +VD+  K G +++A    +       A+ W A++   
Sbjct: 1230 RQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTSRIAS-WNAMIVGL 1286

Query: 883  RIHGHLEYA 891
              HG+ E A
Sbjct: 1287 AQHGNAEEA 1295


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
            mitochondrial-like [Glycine max]
          Length = 635

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/648 (35%), Positives = 361/648 (55%), Gaps = 52/648 (8%)

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG-LGYVDVAWSLFNK 487
            +N+   N LI+ Y R   ++ A RVF+ MK  +  +WNS+++++    G+ + A  LF K
Sbjct: 39   NNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEK 98

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            +     QP+ +++N +L+ H+ H    +       M       + +S + ++ A+ ++ L
Sbjct: 99   IP----QPNTVSYNIMLACHWHHLGVHDARGFFDSMP----LKDVASWNTMISALAQVGL 150

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            +                                     A+ +F  M  +N V+W++++SG
Sbjct: 151  MG-----------------------------------EARRLFSAMPEKNCVSWSAMVSG 175

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
            Y   G    A +         +    ++W ++++GY  +G+ + A  +   M        
Sbjct: 176  YVACGDLDAAVECFYAAPMRSV----ITWTAMITGYMKFGRVELAERLFQEMSMR----T 227

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +VTW ++I+G ++N    + L+ F  M +  +KPN+ +++S+L  C  L  LQ GK++H 
Sbjct: 228  LVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQ 287

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            L  K     D    T L+ MYSK G+LK A E+F +   K +  WN MI G+A +G GK+
Sbjct: 288  LVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKK 347

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF E+ + G +PD ITF A+L AC ++GLV+ G +YF++M  D+ I    EHY+CMV
Sbjct: 348  ALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMV 407

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG L EA D I++MPFKP   I+G LLG+CRIH +L  AE A++ L +L+P  + 
Sbjct: 408  DLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIAT 467

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y  + N+ A  NRW+ V  +R SM +  V  +  +SWI+I+ +VH F +    HP    
Sbjct: 468  GYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELAS 527

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I+ +L  L  +MK  GYVPD   V  D+ EE K ++LL H+EKLAI +GL+K     PIR
Sbjct: 528  IHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIR 587

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V KN RVC DCH+A KY+S + GREI +RD  RFHHF++G CSC D W
Sbjct: 588  VFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 183/442 (41%), Gaps = 89/442 (20%)

Query: 201 TNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS--LIFHYLEFGDFTSAAKAFFLYFSRSY 258
           T+ F  LS   S H    +    +N+++++ S  LI  Y+  GD  SA + F     +S 
Sbjct: 17  TSSFVTLSKYVSSHTHQHE----FNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKST 72

Query: 259 ADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
             W+S L  +    G  +   +++ ++     +  + +L             W  + VH 
Sbjct: 73  VTWNSILAAFAKKPGHFEYARQLFEKIPQPNTVSYNIMLA----------CHWHHLGVHD 122

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
           +   RGF   + LK           DV S N + S ++             V L  E   
Sbjct: 123 A---RGFFDSMPLK-----------DVASWNTMISALAQ------------VGLMGE--- 153

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A +LF  M   +  + S  +V    AC  + A  E          +A   ++     +I
Sbjct: 154 -ARRLFSAMPEKNCVSWS-AMVSGYVACGDLDAAVE-------CFYAAPMRSVITWTAMI 204

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           + Y +  ++ELA R+F  M    L +WN+MI+ Y   G  +    LF  M  + +     
Sbjct: 205 TGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGV----- 259

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
                                         +PN  S++ VL   + L  L+ G++ H  +
Sbjct: 260 ------------------------------KPNALSLTSVLLGCSNLSALQLGKQVHQLV 289

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            +  L  D   GTSL+ MY K   L++A E+F  +  +++V WN++ISGY   G    A 
Sbjct: 290 CKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKAL 349

Query: 619 KMLNQMEEEEIKPDLVSWNSLV 640
           ++ ++M++E +KPD +++ +++
Sbjct: 350 RLFDEMKKEGLKPDWITFVAVL 371



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 3/227 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y++FG    A + F     R+   W++ +  Y    G  ++ L ++  +   GV 
Sbjct: 202 AMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVE-NGRAEDGLRLFRTMLETGVK 260

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +  LT +L  C+ L A  LG +VH  + K     D     +L++ Y KC D++ A +L
Sbjct: 261 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWEL 320

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F ++   +D + WN +I    ++   + A++LF EM+    K    T V +L AC   G 
Sbjct: 321 FIQIPR-KDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGL 379

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
              G Q    + +   +E+      C++ +  R  KL  A  +  SM
Sbjct: 380 VDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSM 426


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/736 (35%), Positives = 380/736 (51%), Gaps = 79/736 (10%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            AI L+R M          T   +L+AC+ +     G+ IH +   + L ++L V   LI 
Sbjct: 84   AIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALID 143

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            +Y R  +   A  VF  M                                      D++ 
Sbjct: 144  LYIRCARFGPARNVFAKMP-----------------------------------MRDVVA 168

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            WN +L+G+  HG Y + +  L  MQ  G  RPN S++  +L  + +   L  G   H Y 
Sbjct: 169  WNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYC 228

Query: 559  LRNGLDYD---LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC------ 609
            LR  L+ +   + +GT+L+DMY K   L  A  VF  M  RN V W++LI G+       
Sbjct: 229  LRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMT 288

Query: 610  -----FKGLFVNAKKMLNQ-------------------------MEEEEIKPDLVSWNSL 639
                 FK + V     L+                          + +  I  DL + NSL
Sbjct: 289  EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            +S Y+  G   EA +    +       + +++ +L+SG +QN    E+   F +MQ  ++
Sbjct: 349  LSMYAKAGLINEATMFFDEIA----VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            +P+  TM SL+  C  L  LQ+GK  H   +  G   +  +   LIDMY+K G +  +R+
Sbjct: 405  EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF K   + + SWN MI G+ I+G GKEA  LF  +   GF PD +TF  L+AAC +SGL
Sbjct: 465  VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            V EG  +FD+M+  Y I+P +EHY CMVDLL + G LDEA+ FI++MP K D  +WGALL
Sbjct: 525  VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
            G+CRIH +++  +  SR + KL P  + N+ L+ N+ + + R+++   +R      G K 
Sbjct: 585  GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
               +SWI+I+  +H F      HP + +IY EL +++ ++KKLGY  DT  V QD++EEE
Sbjct: 645  SPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEE 704

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K K LL H+EKLAI +G++       I V KN RVC DCHTA KYM+LVR R I +RD  
Sbjct: 705  KEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTN 764

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF+ G+CSC + W
Sbjct: 765  RFHHFKNGQCSCGNFW 780



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 227/541 (41%), Gaps = 93/541 (17%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C+ L+    G  +HA     G   D+ +  AL++ Y +C     A  +F+++  + 
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP-MR 164

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQ-FSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
           D + WN ++     +  + +AI    +MQ     +  + T+V +L   A+ GA  +G  I
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224

Query: 419 HGYVLKSALESN---LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           H Y L++ LE N   + +   L+ MY++  +L  A RVF  M   N  +W+++I  +   
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLC 284

Query: 476 GYVDVAWSLFNKM------------------------------------NSSRIQPDIIT 499
             +  A++LF  M                                      S I  D+  
Sbjct: 285 DRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTA 344

Query: 500 WNCLLS-------------------------------GHFTHGSYQNVLTLLRGMQSLGF 528
            N LLS                               G   +G  +    + + MQ+   
Sbjct: 345 SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            P+ +++  ++ A + L  L++G+ SHG ++  GL  +  +  SL+DMY K   +  +++
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VFD M  R++V+WN++I+GY   GL   A  +   M+ +   PD V++  L++  S  G 
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 649 SKEALVIIHHMKNS-GIYPNVVTWTSLIS----GSLQNENYRESLKFFIQMQQEDIKPNS 703
             E       M +  GI P +  +  ++     G L +E Y+     FIQ     +K + 
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQ-----FIQSMP--LKADV 577

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG----LIDMYSKSGNLKSARE 759
               +LL  C     +  GK++  +  K G        TG    L +++S +G    A E
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLG-----PEGTGNFVLLSNIFSAAGRFDEAAE 632

Query: 760 V 760
           V
Sbjct: 633 V 633



 Score =  123 bits (309), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 174/377 (46%), Gaps = 31/377 (8%)

Query: 143 HSIYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETN 202
           H +YHH        Q+    +PN+     T ++L P   LA+   L        F   + 
Sbjct: 179 HGMYHHAIAHLLDMQDHGGLRPNA----STLVSLLPL--LAQHGAL--------FQGTSI 224

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
              CL +   ++ + + +G          +L+  Y +      A + F     R+   WS
Sbjct: 225 HAYCLRACLEQNEEQVLIGT---------ALLDMYAKCKQLVYACRVFHGMPVRNDVTWS 275

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLI 321
           + +  +      + E   ++ ++  +G+ F S   +   L++C  L    +G ++HA + 
Sbjct: 276 ALIGGF-VLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIA 334

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           K G   D+    +L++ Y K   +  A   F E++ ++D + +  ++   ++N K E A 
Sbjct: 335 KSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA-VKDTISYGALLSGCVQNGKAEEAF 393

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            +F++MQ  + +    T+V ++ AC+ + A   GK  HG V+   L    S+CN LI MY
Sbjct: 394 LVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMY 453

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           ++  K++L+ +VFD M   ++ SWN+MI+ Y   G    A +LF  M +    PD +T+ 
Sbjct: 454 AKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFI 513

Query: 502 CLL-----SGHFTHGSY 513
           CL+     SG  T G +
Sbjct: 514 CLIAACSHSGLVTEGKH 530


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 256/735 (34%), Positives = 387/735 (52%), Gaps = 77/735 (10%)

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKML 403
            ++ A K+F ++    +   WN +I     +     ++ +F  M   S    ++ T   ++
Sbjct: 189  LDYARKVFDQIPQ-PNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLI 247

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            +A A+   F  GK +HG  +K++   ++ V N LI  Y+                     
Sbjct: 248  KAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYA--------------------- 286

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                        G++D+A+ +F  +  +    DI++WN +++G    G     L L   M
Sbjct: 287  ----------SCGHLDLAYLVFEMIEGN--NKDIVSWNSMVTGFVQGGYPDKALDLFERM 334

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            ++ G  PN  ++  V+ A  +   L  GR+   YI RN +  +L V  + +DM+VK   +
Sbjct: 335  RNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEV 394

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            + A+ +FDNM+ R                                   D+VSW +++ GY
Sbjct: 395  EIARGLFDNMEKR-----------------------------------DVVSWTTIIDGY 419

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF--IQMQQEDIKP 701
            +   +   A  I   M       ++  W  LISG  Q+   +E+L  F  +Q+ +   +P
Sbjct: 420  AKMSEHGIARDIFDSMPRK----DIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARP 475

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +  T+ S L  C  LG +  G+ IH    K     +  +AT LIDMYSKSG+++ A EVF
Sbjct: 476  DQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVF 535

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                NK +  W+ MI G A++G G+ AI LF ++ ET  +P+++TFT LL AC +SGLV+
Sbjct: 536  HSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVD 595

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            EG + FD M   Y ++P  +HYSCMVD+LG+AG+L+EA  FI  MP  P A++WGALLG+
Sbjct: 596  EGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGA 655

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C IHG+LE AE A  RL ++EP N   Y L+ NL A +  WE V  LR  M + G+K   
Sbjct: 656  CCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKET 715

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE-K 1000
              S I+ID  VH F      HP + +IY +L  +++ ++  GYV +T C+ Q ++EEE K
Sbjct: 716  GCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMK 775

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
             K L  H+EK+AI +GL++  S+  IR++KN RVC DCHT AK +S V GR+I LRD  R
Sbjct: 776  EKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYR 835

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF  G CSC D W
Sbjct: 836  FHHFSGGHCSCQDYW 850



 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 142/569 (24%), Positives = 273/569 (47%), Gaps = 21/569 (3%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTS---AAKAFFLYFSRSYADWSSFLE 266
           +K  HAQM++  K+   D    S +F    F  F++   A K F      +   W+  + 
Sbjct: 155 LKQIHAQMLRTNKL--HDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIR 212

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
              +    +Q +L     LH            +++K   +   F +G  VH   IK  F 
Sbjct: 213 ALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFG 272

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFR 385
            DV +  +L++FY  C  ++ A  +F  +     D++ WN ++   ++    + A+ LF 
Sbjct: 273 DDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFE 332

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            M+       + T+V ++ ACAK      G+++  Y+ ++ +  NL+VCN  I M+ +  
Sbjct: 333 RMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCG 392

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
           ++E+A  +FD+M+  ++ SW ++I  Y  +    +A  +F+ M     + DI  WN L+S
Sbjct: 393 EVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMP----RKDIPAWNVLIS 448

Query: 506 GHFTHGSYQNVLTLLRGMQ--SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           G+   G  +  L + R +Q    G RP+  ++   L A  +L  +  G   HGYI +  +
Sbjct: 449 GYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERI 508

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             +  + TSL+DMY K+  ++ A EVF ++ N+++  W+++I+G    G    A ++   
Sbjct: 509 QLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLD 568

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNE 682
           M+E ++KP+ V++ +L+   S  G   E   +   M+   G+ P    ++ ++    +  
Sbjct: 569 MQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAG 628

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI--HCLCLKNGFIKDAYV 740
           +  E+LKF   M    + P+++   +LL  C   G L+  ++     L ++ G    AYV
Sbjct: 629 HLEEALKFIEGMP---LAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGN-HGAYV 684

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTL 769
              L ++Y+K+G+ +   E+ ++  +  L
Sbjct: 685 L--LSNLYAKTGDWEGVSELRQQMRDSGL 711



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 154/336 (45%), Gaps = 40/336 (11%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDM--VKSLIFHYLEFGDFTSAAKAFFLYF--SRSYAD 260
           RC    K+ H   IK       DD+  + SLI  Y   G    A   F +    ++    
Sbjct: 254 RCFLVGKAVHGMAIKTS---FGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVS 310

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +  +   GG   + L+++  +  +GV   +  +  ++  C K M   LG +V   +
Sbjct: 311 WNSMVTGFVQ-GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYI 369

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS------------------------ 356
            +     ++++  A ++ + KC +VE A  LF  +                         
Sbjct: 370 DRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIAR 429

Query: 357 DLEDDL------LWNEIIMVKLRNEKWENAIKLFREMQF--SSAKAISRTIVKMLQACAK 408
           D+ D +       WN +I    ++ + + A+ +FRE+Q   S A+    T++  L ACA+
Sbjct: 430 DIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQ 489

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +GA   G+ IHGY+ K  ++ N ++   LI MYS++  +E A  VF S+ + ++  W++M
Sbjct: 490 LGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAM 549

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           I+     G  + A  LF  M  ++++P+ +T+  LL
Sbjct: 550 IAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLL 585



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 140/317 (44%), Gaps = 21/317 (6%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y +  +   A   F     +    W+  +  YE   G  +E L ++ EL      
Sbjct: 414 TIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQ-SGRPKEALAIFRELQLTKSG 472

Query: 292 FRSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
            R   +T++  L  C +L A  +G  +H  + K     + +L  +L++ Y K  DVE A 
Sbjct: 473 ARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAI 532

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           ++F  + + +D  +W+ +I     + + E AI+LF +MQ +  K  S T   +L AC+  
Sbjct: 533 EVFHSIGN-KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHS 591

Query: 410 GAFHEGK-------QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHN 461
           G   EGK       +++G V K+   S      C++ +  R   LE A +  + M    +
Sbjct: 592 GLVDEGKRLFDEMERVYGVVPKTKHYS------CMVDVLGRAGHLEEALKFIEGMPLAPS 645

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLL 520
            S W +++ +    G +++A    +++    I+P       LLS  +   G ++ V  L 
Sbjct: 646 ASVWGALLGACCIHGNLELAEKACSRL--LEIEPGNHGAYVLLSNLYAKTGDWEGVSELR 703

Query: 521 RGMQSLGFRPNGSSVSV 537
           + M+  G +      S+
Sbjct: 704 QQMRDSGLKKETGCSSI 720



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 117/303 (38%), Gaps = 62/303 (20%)

Query: 694 MQQEDIKPNSTTMS-----SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM- 747
           +Q     P S T +     +L Q C     L   K+IH   L+   + D Y A+ L    
Sbjct: 125 VQHSSPTPASATATNVGDRALFQQCTSFKQL---KQIHAQMLRTNKLHDPYAASELFTAA 181

Query: 748 -YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQPDAI 805
            +S    L  AR+VF +     L SWN +I   A   +  +++L+F  +L ++ F P+  
Sbjct: 182 AFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKF 241

Query: 806 TFTALLAA-----CKNSGLVEEGWKYFDSMSTDYNIIPTIEHY--SC------------- 845
           TF  L+ A     C   G    G     S   D  ++ ++ H+  SC             
Sbjct: 242 TFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMI 301

Query: 846 ------------MVDLLGKAGYLDEAWDF---IRTMPFKPDATIWGALLGSCRIHGHLEY 890
                       MV    + GY D+A D    +R     P+A    +++ +C    +L  
Sbjct: 302 EGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTL 361

Query: 891 AEIASRRLFKLEPCNSANYN-LMMNL------LAMSNRWEDVERLRHSMDEVGVKSVLVW 943
                      + C+  + N +MMNL      + M  +  +VE  R   D +  + V+ W
Sbjct: 362 GR---------KVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSW 412

Query: 944 SWI 946
           + I
Sbjct: 413 TTI 415


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 261/901 (28%), Positives = 439/901 (48%), Gaps = 77/901 (8%)

Query: 210  VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
            V+  HA++I  G +  S  +   LI  Y   G    A + F   + + ++ W + +    
Sbjct: 189  VEQIHARIIYQG-LGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLS 247

Query: 270  SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
                EV E + ++ +++  G++      + +L  C K+ +  +G ++H  ++K GF  D 
Sbjct: 248  KNECEV-EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 306

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            ++  AL++ Y     + SA  +FS +S   D + +N +I    +    E A++LF+ MQ 
Sbjct: 307  YVCNALVSLYFHLGSLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMQL 365

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               +  S T+  ++ AC+  G    G+Q+H Y  K    SN  +   L+++Y++ + +E 
Sbjct: 366  DGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIET 425

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A   F   +  N+  WN M+          VA+ L + +                     
Sbjct: 426  ALNYFLETEVENVVLWNVML----------VAYGLLDDL--------------------- 454

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                +N   + R MQ     PN  +   +L+    L  L+ G + H  I++     + YV
Sbjct: 455  ----RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYV 510

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             + L+DMY K   L  A ++      +++V+W ++I+GY        A     QM +  I
Sbjct: 511  CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 570

Query: 630  KPDLVSW-----------------------------------NSLVSGYSIWGQSKEALV 654
            + D V                                     N+LV+ YS  G  +EA +
Sbjct: 571  RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYL 630

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
                 +      + + W +L+SG  Q+ N  E+L+ F +M +E I  N+ T  S ++   
Sbjct: 631  AFEQTEAG----DNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAAS 686

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
                ++ GK++H +  K G+  +  V   +I MY+K G++  A++ F + + K   SWN 
Sbjct: 687  ETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNA 746

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MI  ++ +G G EA+  F +++ +  +P+ +T   +L+AC + GLV++G +YF+SM+T+Y
Sbjct: 747  MINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEY 806

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             + P  EHY C+VD+L +AG L  A DFI  MP +PDA +W  LL +C +H ++E  E A
Sbjct: 807  GLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFA 866

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            +  L +LEP +SA Y L+ NL A+  +W+  +  R  M E GVK     SWI++   +H 
Sbjct: 867  AHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 926

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP   EI+     L     ++GYV D   +  ++ +E+K   +  H+EKLAI 
Sbjct: 927  FYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAIS 986

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +GL+   +  PI V+KN RVC+DCH   K++S V  REI +RD  RFHHF  G CSC D 
Sbjct: 987  FGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1046

Query: 1075 W 1075
            W
Sbjct: 1047 W 1047



 Score =  207 bits (526), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 173/614 (28%), Positives = 277/614 (45%), Gaps = 76/614 (12%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++H+ ++K GFD +  L   L++FY    D++ A K+F E+ +      WN++I    
Sbjct: 87  GRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPE-RTIFTWNKMIKELA 145

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC-AKVGAFHEGKQIHGYVLKSALESNL 431
                     LF  M   +      T   +L+AC     AF   +QIH  ++   L  + 
Sbjct: 146 SRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKST 205

Query: 432 SVCNCLISMYSRNNKLELATRVFDS--MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
            VCN LI +YSRN  ++ A RVFD   +KDH  SSW +MIS  +               N
Sbjct: 206 IVCNPLIDLYSRNGFVDRARRVFDGLYLKDH--SSWVAMISGLS--------------KN 249

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
              ++                      + L   M  LG  P   + S VL A  ++  L+
Sbjct: 250 ECEVE---------------------AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 288

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G + HG +L+ G   D YV  +L+ +Y     L +A+ +F NM  R+ V +N+LI+G  
Sbjct: 289 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLS 348

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV-----SGYSIWGQSK-------------- 650
             G    A ++  +M+ + ++PD  +  SLV      G    GQ                
Sbjct: 349 QCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDK 408

Query: 651 -EALVIIHHMKNSGI-----------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            E  ++  + K S I             NVV W  ++      ++ R S + F QMQ E+
Sbjct: 409 IEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 468

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           I PN  T  S+L+TC  LG L+ G++IH   +K  F  +AYV + LIDMY+K G L +A 
Sbjct: 469 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAW 528

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
           ++  + A K + SW  MI G+  Y    +A+  F ++L+ G + D +  T  ++AC    
Sbjct: 529 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 588

Query: 819 LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW-DFIRTMPFKPDATIWGA 877
            ++EG +   + +        +   + +V L  K G ++EA+  F +T     D   W A
Sbjct: 589 ALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEA--GDNIAWNA 645

Query: 878 LLGSCRIHGHLEYA 891
           L+   +  G+ E A
Sbjct: 646 LVSGFQQSGNNEEA 659



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 162/711 (22%), Positives = 309/711 (43%), Gaps = 84/711 (11%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY--ESF 271
           H+Q++K+G   N+  + + L+  YL  GD   A K F     R+   W+  +++    S 
Sbjct: 91  HSQILKLG-FDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSL 149

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCT-KLMAFWLGVEVHASLIKRGFDFDVH 330
            G+V     ++G +  + V       + +L+ C    +AF +  ++HA +I +G      
Sbjct: 150 SGKV---FCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTI 206

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +   L++ Y +   V+ A ++F  +  L+D   W  +I    +NE    AI+LF +M   
Sbjct: 207 VCNPLIDLYSRNGFVDRARRVFDGLY-LKDHSSWVAMISGLSKNECEVEAIRLFCDMYVL 265

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                      +L AC K+ +   G+Q+HG VLK    S+  VCN L+S+Y     L  A
Sbjct: 266 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISA 325

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             +F +M   +  ++N++I+  +  GY + A  LF +M                      
Sbjct: 326 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM---------------------- 363

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                        Q  G  P+ ++++ ++ A +    L  G++ H Y  + G   +  + 
Sbjct: 364 -------------QLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIE 410

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            +L+++Y K   ++ A   F   +  N+V WN ++  Y       N+ ++  QM+ EEI 
Sbjct: 411 GALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 470

Query: 631 PDLVSWNS-----------------------------------LVSGYSIWGQSKEALVI 655
           P+  ++ S                                   L+  Y+  G+   A  I
Sbjct: 471 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDI 530

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
           +  ++ +G   +VV+WT++I+G  Q     ++L  F QM    I+ +   +++ +  C G
Sbjct: 531 L--IRFAG--KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 586

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
           L  L+ G++IH     +GF  D      L+ +YSK GN++ A   F ++      +WN +
Sbjct: 587 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNAL 646

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
           + GF   GN +EA+ +F  +   G   +  TF + + A   +  +++G K   ++ T   
Sbjct: 647 VSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQG-KQVHAVITKTG 705

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
                E  + ++ +  K G + +A      +  K + + W A++ +   HG
Sbjct: 706 YDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS-WNAMINAYSKHG 755



 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 231/535 (43%), Gaps = 91/535 (17%)

Query: 397 RTIVKMLQACAKV-GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           +T+  +L+ C K  G+  EG+++H  +LK   ++N  +   L+  Y     L+ A +VFD
Sbjct: 68  QTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFD 127

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            M +  + +WN MI            + LF +M +  + P+              G++  
Sbjct: 128 EMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPN-------------EGTFSG 174

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
           VL   RG             SV    V ++         H  I+  GL     V   L+D
Sbjct: 175 VLEACRGG------------SVAFDVVEQI---------HARIIYQGLGKSTIVCNPLID 213

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG--------------------------YC 609
           +Y +N  +  A+ VFD +  ++  +W ++ISG                          Y 
Sbjct: 214 LYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYA 273

Query: 610 FKGLFVNAKKMLNQMEEEEI---------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           F  +    KK+ +    E++           D    N+LVS Y   G    +L+   H+ 
Sbjct: 274 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG----SLISAEHIF 329

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
           ++    + VT+ +LI+G  Q     ++++ F +MQ + ++P+S T++SL+  C   G L 
Sbjct: 330 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLF 389

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
           +G+++H    K GF  +  +   L+++Y+K  ++++A   F ++  + +  WN M++ + 
Sbjct: 390 SGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYG 449

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT- 839
           +  + + +  +F ++      P+  T+ ++L  C   G +E G +          II T 
Sbjct: 450 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS------QIIKTS 503

Query: 840 --IEHYSC--MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
             +  Y C  ++D+  K G LD AWD +     K D   W  +     I G+ +Y
Sbjct: 504 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTM-----IAGYTQY 552



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 2/182 (1%)

Query: 699 IKPNSTTMSSLLQTCGGL-GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
           I+PN  T+  LL+ C    G L  G+++H   LK GF  +A ++  L+D Y   G+L  A
Sbjct: 63  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            +VF +   +T+ +WN MI   A      +   LF  ++     P+  TF+ +L AC+  
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182

Query: 818 GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            +  +  +   +      +  +    + ++DL  + G++D A      +  K D + W A
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK-DHSSWVA 241

Query: 878 LL 879
           ++
Sbjct: 242 MI 243


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/665 (36%), Positives = 382/665 (57%), Gaps = 45/665 (6%)

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
             K +H  ++ +    ++ +   L+++Y+    + L+   FD +   ++ +WNSMIS+Y  
Sbjct: 35   AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94

Query: 475  LGYVDVAWSLFNK-MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G+   A   F + +  S I+PD  T                            F P   
Sbjct: 95   NGHFHEAIGCFYQLLLVSEIRPDFYT----------------------------FPP--- 123

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
                VL+A      L  GR+ H +  + G  ++++V  SL+ MY +      A+ +FD+M
Sbjct: 124  ----VLKACGT---LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 176

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
              R++ +WN++ISG    G    A  +L++M  E IK + V+  S++  + +   +K  L
Sbjct: 177  PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVF-VDMYAKLGL 235

Query: 654  VIIHHMKNSGIYP--NVVTWTSLISGSLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLL 710
            +   H K   I P  +V++W +LI+G  QN    E+++ +  M++ ++I PN  T  S+L
Sbjct: 236  LDSAH-KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 294

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
                 +G LQ G +IH   +K     D +VAT LID+Y K G L  A  +F +   ++  
Sbjct: 295  PAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV 354

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +WN +I    I+G+ ++ + LF E+L+ G +PD +TF +LL+AC +SG VEEG K+   +
Sbjct: 355  TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG-KWCFRL 413

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
              +Y I P+++HY CMVDLLG+AGYL+ A+DFI+ MP +PDA+IWGALLG+CRIHG++E 
Sbjct: 414  MQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIEL 473

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             + AS RLF+++  N   Y L+ N+ A   +WE V+++R    E G+K    WS I++++
Sbjct: 474  GKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNR 533

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             V VF      HP   EIY EL  L ++MK LGY+PD   V QD++E+EK  +L SH+E+
Sbjct: 534  KVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSER 593

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LAI +G++ T  ++PIR+ KN RVC DCH A K++S +  REI +RD  RFHHF++G CS
Sbjct: 594  LAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICS 653

Query: 1071 CNDCW 1075
            C D W
Sbjct: 654  CGDYW 658



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 197/449 (43%), Gaps = 52/449 (11%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +HA L+  G    + +   L+N Y    DV  +   F ++   +D   WN +I   + N 
Sbjct: 38  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQ-KDVYAWNSMISAYVHNG 96

Query: 376 KWENAIKLFREMQF-SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            +  AI  F ++   S  +    T   +L+AC   G   +G++IH +  K   + N+ V 
Sbjct: 97  HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVA 153

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS----------------------- 471
             LI MYSR     +A  +FD M   ++ SWN+MIS                        
Sbjct: 154 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 213

Query: 472 ----------------YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
                           Y  LG +D A  +F  +       D+I+WN L++G+  +G    
Sbjct: 214 MNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVK----DVISWNTLITGYAQNGLASE 269

Query: 516 VLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
            + + + M+      PN  +   +L A   +  L+ G + HG +++  L  D++V T L+
Sbjct: 270 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLI 329

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           D+Y K   L +A  +F  +   + V WN++IS +   G      K+  +M +E +KPD V
Sbjct: 330 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 389

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
           ++ SL+S  S  G  +E       M+  GI P++  +  ++   L    Y E    FI  
Sbjct: 390 TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVD-LLGRAGYLEMAYDFI-- 446

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           +   ++P+++   +LL  C   G ++ GK
Sbjct: 447 KDMPLQPDASIWGALLGACRIHGNIELGK 475



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 142/322 (44%), Gaps = 41/322 (12%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS-RSYADWSSFLEDYESFG 272
           H    K+G  WN   +  SLI  Y  FG FT  A++ F     R    W++ +      G
Sbjct: 138 HCWAFKLGFQWNVF-VAASLIHMYSRFG-FTGIARSLFDDMPFRDMGSWNAMISGLIQNG 195

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
              Q L +V  E+  +G                               IK  F   V + 
Sbjct: 196 NAAQAL-DVLDEMRLEG-------------------------------IKMNFVTVVSIL 223

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
              ++ Y K   ++SA+K+F E+  ++D + WN +I    +N     AI++++ M+    
Sbjct: 224 PVFVDMYAKLGLLDSAHKVF-EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME--EC 280

Query: 393 KAI---SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           K I     T V +L A A VGA  +G +IHG V+K+ L  ++ V  CLI +Y +  +L  
Sbjct: 281 KEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVD 340

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  +F  +   +  +WN++IS +   G+ +    LF +M    ++PD +T+  LLS    
Sbjct: 341 AMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH 400

Query: 510 HGSYQNVLTLLRGMQSLGFRPN 531
            G  +      R MQ  G +P+
Sbjct: 401 SGFVEEGKWCFRLMQEYGIKPS 422



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 10/240 (4%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG-KGVIFRSR 295
           Y + G   SA K F +   +    W++ +  Y    G   E +EV+  +   K +I    
Sbjct: 230 YAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQ-NGLASEAIEVYKMMEECKEIIPNQG 288

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
               IL     + A   G+++H  +IK     DV +   L++ YGKC  +  A  LF +V
Sbjct: 289 TWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 348

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
              E  + WN II     +   E  +KLF EM     K    T V +L AC+  G   EG
Sbjct: 349 PQ-ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG 407

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL----SSWNSMISS 471
           K     + +  ++ +L    C++ +  R   LE+A   +D +KD  L    S W +++ +
Sbjct: 408 KWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMA---YDFIKDMPLQPDASIWGALLGA 464


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/781 (32%), Positives = 396/781 (50%), Gaps = 90/781 (11%)

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA--IKLFREMQFSSAKAISRTIVKM 402
            +  A+ LF ++    D   +N++I     +     A  + L+R M        + T    
Sbjct: 73   LSRAHHLFDQIPS-PDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFA 131

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            L+AC+ +   H G+ IH + + + L+++L V   L+ MY +   L  A  +F +M     
Sbjct: 132  LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR-- 189

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
                                             D++ WN +L+G+  HG Y + +  L  
Sbjct: 190  ---------------------------------DLVAWNAMLAGYAHHGMYHHAVAHLLS 216

Query: 523  MQSL--GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD----------LYVG 570
            MQ      RPN S++  +L  + +   L  G   H Y +R  L  +          + +G
Sbjct: 217  MQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 276

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA----KKMLNQ--- 623
            T+L+DMY K   L  A+ VFD M  RN V W++LI G+        A    K ML Q   
Sbjct: 277  TALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 336

Query: 624  -----------------------------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                                         + +  +  DL + NSL+S Y+  G   +A+ 
Sbjct: 337  FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 396

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            +   M       + V++++L+SG +QN    E+   F +MQ  +++P++ TM SL+  C 
Sbjct: 397  LFDEMA----VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACS 452

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             L  LQ+G+  H   +  G   +  +   LIDMY+K G +  +R+VF    ++ + SWN 
Sbjct: 453  HLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNT 512

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MI G+ I+G GKEA  LF E+   GF PD +TF  LL+AC +SGLV EG  +F  M   Y
Sbjct: 513  MIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGY 572

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             + P +EHY CMVDLL + G+LDEA++FI++MP + D  +W ALLG+CR++ +++  +  
Sbjct: 573  GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKV 632

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            SR + +L P  + N+ L+ N+ + + R+++   +R      G K     SWI+I+  +H 
Sbjct: 633  SRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHA 692

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP + EIY EL +++  +KKLGY PDT  V QD++EEEK K L+ H+EKLAI 
Sbjct: 693  FVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIA 752

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            YG++       I V KN RVC DCHT  K++SLV+ R I +RD  RFHHF+ G+CSC D 
Sbjct: 753  YGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDF 812

Query: 1075 W 1075
            W
Sbjct: 813  W 813



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 211/462 (45%), Gaps = 62/462 (13%)

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG--SYQNVLTLLRGMQSLGFRPNGS 533
           G++  A  LF+++ S    PD+ T+N L+  + +    +  + L L R M      PN  
Sbjct: 71  GHLSRAHHLFDQIPS----PDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           +    L+A + L     GR  H + +  GL  DL+V T+L+DMYVK  CL +A  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKML--NQMEEEEIKPDLVSWNSLVS-----GYSIW 646
             R++VAWN++++GY   G++ +A   L   QM+   ++P+  +  +L+      G    
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 647 GQSKEALVI---IHHMKNS---------------GIYP------------------NVVT 670
           G S  A  I   +H  +NS                +Y                   N VT
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIK-PNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           W++LI G +      ++   F  M  + +   + T+++S L+ C  L  L+ G+++H L 
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            K+G   D      L+ MY+K+G +  A  +F + A K   S++ ++ G+   G  +EA 
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426

Query: 790 LLFHELLETGFQPDAITFTALLAACKN-----SGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
           L+F ++     +PDA T  +L+ AC +      G    G      ++++ +I       +
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC------N 480

Query: 845 CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            ++D+  K G +D +      MP + D   W  ++    IHG
Sbjct: 481 ALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG 521



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 122/544 (22%), Positives = 224/544 (41%), Gaps = 93/544 (17%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LK C+ L     G  +H   I  G   D+ +  AL++ Y KC  +  A  +F+ +    D
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA-RD 190

Query: 361 DLLWNEIIMVKLRNEKWENAIK--LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            + WN ++     +  + +A+   L  +MQ    +  + T+V +L   A+ GA  +G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 419 HGYVLKSALESN----------LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           H Y +++ L  N          + +   L+ MY++   L  A RVFD+M   N  +W+++
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 469 ISSYTGLGYVDVAWSLFNKM------------------------------------NSSR 492
           I  +     +  A+ LF  M                                      S 
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 493 IQPDIITWNCLLS-------------------------------GHFTHGSYQNVLTLLR 521
           +  D+   N LLS                               G+  +G  +    + +
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            MQ+    P+ +++  ++ A + L  L++GR SHG ++  GL  +  +  +L+DMY K  
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            +  +++VF+ M +R+IV+WN++I+GY   GL   A  +  +M      PD V++  L+S
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 642 GYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             S  G   E     H M +  G+ P +  +  ++    +     E+ +F   +Q   ++
Sbjct: 551 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF---IQSMPLR 607

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG----LIDMYSKSGNLKS 756
            +     +LL  C     +  GK++  +  + G        TG    L ++YS +G    
Sbjct: 608 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELG-----PEGTGNFVLLSNIYSAAGRFDE 662

Query: 757 AREV 760
           A EV
Sbjct: 663 AAEV 666



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 182/368 (49%), Gaps = 24/368 (6%)

Query: 143 HSIYHHFNTRT-SINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISS--GFCFLN 199
           H +YHH      S+    H  +PN+     T +AL P   LA+Q  L+  +S   +C   
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNA----STLVALLPL--LAQQGALAQGTSVHAYCIRA 257

Query: 200 ETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYA 259
             +  R   + KSK    + +G          +L+  Y + G    A + F    +R+  
Sbjct: 258 CLHPNR---NSKSKLTDGVLLGT---------ALLDMYAKCGSLLYARRVFDAMPARNEV 305

Query: 260 DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHA 318
            WS+ +  +       Q  L ++  +  +G+ F S   +   L+ C  L    +G ++HA
Sbjct: 306 TWSALIGGFVLCSRMTQAFL-LFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHA 364

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
            L K G   D+    +L++ Y K   ++ A  LF E++ ++D + ++ ++   ++N + E
Sbjct: 365 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA-VKDTVSYSALVSGYVQNGRAE 423

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A  +F++MQ  + +  + T+V ++ AC+ + A   G+  HG V+   L S  S+CN LI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY++  +++L+ +VF+ M   ++ SWN+MI+ Y   G    A +LF +MN+    PD +
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 499 TWNCLLSG 506
           T+ CLLS 
Sbjct: 544 TFICLLSA 551


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Brachypodium distachyon]
          Length = 921

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 290/948 (30%), Positives = 460/948 (48%), Gaps = 131/948 (13%)

Query: 175  ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMI-----KMGKIWNS--- 226
            A+P  D +A  + +S   +     +    F  +S    + A ++     ++G++ ++   
Sbjct: 58   AMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRV 117

Query: 227  -DDMVK-------SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY---------- 268
             D M +       +++  Y++ GD T A + F    SR    W+S +  Y          
Sbjct: 118  FDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAW 177

Query: 269  ESFGGEVQELLEVWG---------ELHGKG-VIFR----------SRILTIILKLCTKLM 308
              F    Q  L  W          E HGKG  IFR                +L   T L 
Sbjct: 178  NLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQ 237

Query: 309  AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK-CRDVESANKLFSEVSDLEDDLLWNEI 367
               +   +   ++K GF+ DV +  +++N Y +    ++ A K F  + +  ++  W+ +
Sbjct: 238  DLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVE-RNEYTWSTM 296

Query: 368  IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
            I       + + AI ++            R  VK + +                  ++AL
Sbjct: 297  IAALSHGGRIDAAIAVY-----------GRDPVKSIPS------------------QTAL 327

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             + L+ C           ++  A  +F+ + D  + SWN+MI+ Y   G VD A  LF++
Sbjct: 328  LTGLARCG----------RITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDR 377

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            M       + I+W  +++G+  +G  +  L LL+ +   G  P+ SS++    A + +  
Sbjct: 378  MPFR----NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGA 433

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L+ GR+ H   ++ G  ++ YV  +L+ MY K   ++  ++VF+ M+ ++ V+WNS I  
Sbjct: 434  LETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFI-- 491

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                     A  + N M E+                              H+ ++ +  +
Sbjct: 492  ---------AALVQNNMLEDA----------------------------RHIFDNMLSRD 514

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            VV+WT++IS   Q E   E+++FF  M  E  KPNS  ++ LL  CGGLG  + G++IH 
Sbjct: 515  VVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHT 574

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            + +K+G   +  VA  L+ MY K G   S  +VF     + + +WN  I G A +G G+E
Sbjct: 575  VAIKHGMDSELIVANALMSMYFKCGCADS-HKVFDSMEERDIFTWNTFITGCAQHGLGRE 633

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            AI ++  +   G  P+ +TF  LL AC ++GLV+EGW++F SMS DY + P +EHY+CMV
Sbjct: 634  AIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMV 693

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+ G +  A  FI  MP +PD  IW ALLG+C+IH + E    A+ +LF  EP N+ 
Sbjct: 694  DLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAG 753

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            NY ++ N+ +    W +V  LR  M + GV      SW+QI   VH F      H    E
Sbjct: 754  NYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEE 813

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I + L  L + ++  GYVPDT  V  DIDEE+K   LL H+EKLA+ YGL+ T    PI+
Sbjct: 814  IDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQ 873

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++KN R+C DCHT  K++S V  R+I +RDG RFHHFR G CSC D W
Sbjct: 874  IMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 256/569 (44%), Gaps = 61/569 (10%)

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           +R L +   L     A W  + V +  + R  D   H   A +    +   +  A ++F 
Sbjct: 2   ARYLQLRRHLSAAAAATWAPLPVRS--VHRALDKSAH--SARIRELARLGRLREAREVFD 57

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
            +    D + WN +I     +   E+A  LF  +   +     RT   +L   A++G   
Sbjct: 58  AMPH-RDIIAWNSMISAYCNSGMLEDARILFDAISGGNV----RTATILLSGYARLGRVL 112

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           + ++    V     E N    N ++S Y +N  + +A R+FD+M   +++SWNSM++ Y 
Sbjct: 113 DARR----VFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYC 168

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
               +  AW+LF +M     Q +++TW  ++SG+     +     + R M   G  P+ S
Sbjct: 169 HSRQMVDAWNLFKQMP----QRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQS 224

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN-DCLQNAQEVFDN 592
           + + VL AVT L+ L         +L+ G + D+ +GTS++++Y ++   L  A + FD 
Sbjct: 225 NFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDG 284

Query: 593 MKNRNIVAWNSLI-------------------------------SGYCFKGLFVNAKKML 621
           M  RN   W+++I                               +G    G    A+ + 
Sbjct: 285 MVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILF 344

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
            Q+ +    P +VSWN++++GY   G   EA  +   M     + N ++W  +I+G  QN
Sbjct: 345 EQIPD----PIVVSWNAMITGYMQNGMVDEAKELFDRMP----FRNTISWAGMIAGYAQN 396

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
               E+L     + +  + P+ ++++S    C  +G L+ G+++H L +K G   ++YV 
Sbjct: 397 GRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVC 456

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             LI MY K  N++  R+VF +   K   SWN  I         ++A  +F  +L     
Sbjct: 457 NALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSR--- 513

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSM 830
            D +++T +++A   +   +E  ++F +M
Sbjct: 514 -DVVSWTTIISAYAQAERGDEAVEFFKTM 541


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/766 (33%), Positives = 399/766 (52%), Gaps = 80/766 (10%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYG--KCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            ++HA +++ G  FD      L+          ++ A ++F ++    +   WN +I    
Sbjct: 53   QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH-PNLYTWNTLIRAYA 111

Query: 373  RNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             +     ++ +F  M   S     + T   +++A +++     GK  HG V+K  L S++
Sbjct: 112  SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171

Query: 432  SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
             + N LI  Y++  +L L  RVF                                 +N  
Sbjct: 172  FILNSLIHFYAKCGELGLGYRVF---------------------------------VNIP 198

Query: 492  RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
            R   D+++WN +++     G  +  L L + M++   +PNG ++  VL A  +    ++G
Sbjct: 199  R--RDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256

Query: 552  RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            R  H YI RN +   L +  +++DMY K                             C  
Sbjct: 257  RWVHSYIERNRIGESLTLSNAMLDMYTK-----------------------------C-- 285

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
            G   +AK++ ++M E+    D+VSW +++ GY+  G+   A  I   M N     ++  W
Sbjct: 286  GSVEDAKRLFDKMPEK----DIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ----DIAAW 337

Query: 672  TSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
             +LIS   Q    +E+L+ F ++Q  +  KP+  T+ S L  C  LG +  G  IH    
Sbjct: 338  NALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIK 397

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K G   + ++ T LIDMY K G+L+ A  VF     K +  W+ MI G A++G+GK+AI 
Sbjct: 398  KQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIA 457

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF ++ E   +P+A+TFT +L AC + GLVEEG  +F+ M   Y ++P ++HY+CMVD+L
Sbjct: 458  LFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDIL 517

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG L+EA + I  MP  P A++WGALLG+C IH ++  AE A  +L +LEP N   Y 
Sbjct: 518  GRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYV 577

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A + +W+ V  LR  M +VG+K     S I++D IVH F      HP+  +IY 
Sbjct: 578  LLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYA 637

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEE-KGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
            +L  +V+ ++ +GYVP+   + Q ++EE+ K + L  H+EKLAI +GL+ T    PIR++
Sbjct: 638  KLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIV 697

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVC DCH+ AK +S +  REI LRD  RFHHFREG CSC D W
Sbjct: 698  KNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 260/549 (47%), Gaps = 21/549 (3%)

Query: 168 TNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD 227
           T +P S+ L      A    LS I       +ET +      +K  HAQM++ G  ++  
Sbjct: 19  TPNPNSITLNNDRYFANHPTLSLIDQ----CSETKQ------LKQIHAQMLRTGLFFDPF 68

Query: 228 DMVKSLIFHYLE-FGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELH 286
              + +    L  F     A + F      +   W++ +  Y S     Q LL     LH
Sbjct: 69  SASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLH 128

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
                        ++K  ++L   + G   H  +IK     DV +  +L++FY KC ++ 
Sbjct: 129 QSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELG 188

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
              ++F  +    D + WN +I   ++    E A++LF+EM+  + K    T+V +L AC
Sbjct: 189 LGYRVFVNIPR-RDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSAC 247

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           AK   F  G+ +H Y+ ++ +  +L++ N ++ MY++   +E A R+FD M + ++ SW 
Sbjct: 248 AKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWT 307

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-S 525
           +M+  Y  +G  D A  +F+ M +     DI  WN L+S +   G  +  L L   +Q S
Sbjct: 308 TMLVGYAKIGEYDAAQGIFDAMPNQ----DIAAWNALISAYEQCGKPKEALELFHELQLS 363

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
              +P+  ++   L A  +L  +  G   H YI + G+  + ++ TSL+DMY K   LQ 
Sbjct: 364 KTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQK 423

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           A  VF +++ +++  W+++I+G    G   +A  + ++M+E+++KP+ V++ +++   S 
Sbjct: 424 ALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSH 483

Query: 646 WGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            G  +E     + M+   G+ P V  +  ++    +     E+++   +M    + P ++
Sbjct: 484 VGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMP---MAPAAS 540

Query: 705 TMSSLLQTC 713
              +LL  C
Sbjct: 541 VWGALLGAC 549



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 111/292 (38%), Gaps = 54/292 (18%)

Query: 701 PNSTTMS-----------SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
           PNS T++           SL+  C     L   K+IH   L+ G   D + A+ LI   +
Sbjct: 22  PNSITLNNDRYFANHPTLSLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAA 78

Query: 750 KSG--NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ-PDAIT 806
            S   +L  A++VF +  +  L +WN +I  +A   N  +++L+F  +L      PD  T
Sbjct: 79  LSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFT 138

Query: 807 FTALLAACKN-----SGLVEEGWKYFDSMSTDYNIIPTIEHY------------------ 843
           F  L+ A        +G    G      + +D  I+ ++ H+                  
Sbjct: 139 FPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIP 198

Query: 844 -------SCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGALLGSCRIHGHLEYAEI 893
                  + M+    + G  +EA +  + M     KP+      +L +C      E+   
Sbjct: 199 RRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRW 258

Query: 894 ASRRLFKLEPCNSANY-NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
               + +     S    N M+++       ED +RL   M E   K ++ W+
Sbjct: 259 VHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPE---KDIVSWT 307


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza
            sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza
            sativa Japonica Group]
          Length = 808

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 253/746 (33%), Positives = 392/746 (52%), Gaps = 55/746 (7%)

Query: 340  GKCRDVESANKLFSEVSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQFS-SAKAISR 397
            G+ RD   A   F  V     D +L N ++    R      A+ +F  +  S S +    
Sbjct: 108  GRLRD---AAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDY 164

Query: 398  TIVKMLQACAKVGAFH-----EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL--- 449
            +   ++ A   VG  H        Q+H  VLKS   + LSV N LI++Y + +  E    
Sbjct: 165  SFTALISA---VGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWD 221

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A +V D M D +  +W +M+  Y   G V+ A S+F +++    + D++ WN ++SG+  
Sbjct: 222  ARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG---KFDVV-WNAMISGYVQ 277

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
             G   +   L R M S     +  + + VL A        +G+  HG I+R         
Sbjct: 278  SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR--------- 328

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
               L   +V    L                  N+L++ Y   G  V AK++ + M  +  
Sbjct: 329  ---LQPNFVPEAALP---------------VNNALVTLYSKGGKIVIAKRIFDTMNLK-- 368

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
              D+VSWN+++SGY   G   +A+ +   M     Y N ++W  ++SG +      ++LK
Sbjct: 369  --DVVSWNTILSGYIDSGCLDKAVEVFKVMP----YKNDLSWMVMVSGYVHGGLSEDALK 422

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F QM+ ED+KP   T +  +  CG LG L++G+++H   ++ GF         L+ MY+
Sbjct: 423  LFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYA 482

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G +  AR VF    N    SWN MI     +G+G+EA+ LF +++  G  PD I+F  
Sbjct: 483  KCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLT 542

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L AC ++GLV+EG+ YF+SM  D+ I P  +HY+ ++DLLG++G + EA D I+TMPF+
Sbjct: 543  ILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE 602

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            P  +IW A+L  CR +G +E+   A+ +LF++ P +   Y L+ N  + + RW D  R+R
Sbjct: 603  PTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVR 662

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              M + GVK     SWI++   +HVF      HP   E+Y  L  + + M+KLGYVPDT+
Sbjct: 663  KLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTK 722

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V  D++  EK  +L +H+EKLA+ +GL+K    A + V+KN R+C DCHTA  +MS   
Sbjct: 723  FVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAV 782

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
            GREI +RD  RFHHF++GECSC + W
Sbjct: 783  GREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 191/389 (49%), Gaps = 13/389 (3%)

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           Y +  DV +A  +F EV D + D++WN +I   +++    +A +LFR M          T
Sbjct: 244 YVRRGDVNAARSVFEEV-DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFT 302

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKS----ALESNLSVCNCLISMYSRNNKLELATRVF 454
              +L ACA  G F  GK +HG +++       E+ L V N L+++YS+  K+ +A R+F
Sbjct: 303 FTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIF 362

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D+M   ++ SWN+++S Y   G +D A  +F  M       + ++W  ++SG+   G  +
Sbjct: 363 DTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSE 418

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
           + L L   M++   +P   + +  + A  EL  LK+GR+ H ++++ G +     G +L+
Sbjct: 419 DALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALL 478

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            MY K   + +A+ VF  M N + V+WN++IS     G    A ++ +QM  E I PD +
Sbjct: 479 TMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRI 538

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           S+ ++++  +  G   E       MK   GI P    +  LI    ++    E+      
Sbjct: 539 SFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKT 598

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           M  E   P  +   ++L  C   G ++ G
Sbjct: 599 MPFE---PTPSIWEAILSGCRTNGDMEFG 624



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 38/323 (11%)

Query: 220 MGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQEL 278
           + ++ + DD+   +++  Y+  GD  +A   F     +    W++ +  Y    G   + 
Sbjct: 226 LDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ-SGMCADA 284

Query: 279 LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF----DVHLKCA 334
            E++  +  + V       T +L  C     F  G  VH  +I+   +F     + +  A
Sbjct: 285 FELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNA 344

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII-----------------MVKLRNE-K 376
           L+  Y K   +  A ++F +  +L+D + WN I+                 ++  +N+  
Sbjct: 345 LVTLYSKGGKIVIAKRIF-DTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLS 403

Query: 377 W-------------ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W             E+A+KLF +M+    K    T    + AC ++GA   G+Q+H +++
Sbjct: 404 WMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLV 463

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           +   E++ S  N L++MY++   +  A  VF  M + +  SWN+MIS+    G+   A  
Sbjct: 464 QCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALE 523

Query: 484 LFNKMNSSRIQPDIITWNCLLSG 506
           LF++M +  I PD I++  +L+ 
Sbjct: 524 LFDQMVAEGIDPDRISFLTILTA 546



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 155/378 (41%), Gaps = 25/378 (6%)

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+ +Y  +  L     +F +  +   VA  SL++ +   G   +A    + +     + D
Sbjct: 69  LIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPA--RRD 126

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSG-IYPNVVTWTSLISGSLQNENYRESLKFF 691
            V  N+++S ++    +  A+ + H +  SG + P+  ++T+LIS   Q  N   +    
Sbjct: 127 TVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNL--AAPHC 184

Query: 692 IQMQQEDIKPN-------STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
            Q+    +K         S  + +L   C       + +++    L     KD    T +
Sbjct: 185 TQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKV----LDEMPDKDDLTWTTM 240

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           +  Y + G++ +AR VF +   K    WN MI G+   G   +A  LF  ++      D 
Sbjct: 241 VVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDE 300

Query: 805 ITFTALLAACKNSGLVEEGWKYFDS-MSTDYNIIP--TIEHYSCMVDLLGKAGYLDEAWD 861
            TFT++L+AC N+G    G       +    N +P   +   + +V L  K G +  A  
Sbjct: 301 FTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKR 360

Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSN 920
              TM  K D   W  +L      G L+ A      +FK+ P  N  ++ +M++      
Sbjct: 361 IFDTMNLK-DVVSWNTILSGYIDSGCLDKAV----EVFKVMPYKNDLSWMVMVSGYVHGG 415

Query: 921 RWEDVERLRHSMDEVGVK 938
             ED  +L + M    VK
Sbjct: 416 LSEDALKLFNQMRAEDVK 433


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 274/871 (31%), Positives = 430/871 (49%), Gaps = 115/871 (13%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY--ESFGGEVQELLE--------- 280
            +++  Y++ GD T A K F    SR  + W++ L  Y       E + L E         
Sbjct: 131  AMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVS 190

Query: 281  --------VWGELHGKG-VIFRSRI----------LTIILKLCTKLMAFWLGVEVHASLI 321
                    V  E HG+   +FR+ +          L  +L     L    +   +H  + 
Sbjct: 191  WTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVH 250

Query: 322  KRGFDFDVHLKCALMNFYGKCRD-VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            K GF+ DV +  A++N Y K  + ++SA K F  ++   ++  W+ II    +  + ++A
Sbjct: 251  KTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMA-ARNEYTWSTIIAALSQAGRIDDA 309

Query: 381  IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
              +++     S    SRT   ML   A+ G   + K +                      
Sbjct: 310  FAVYQRDPLKSVP--SRT--SMLTGLARYGRIDDAKIL---------------------- 343

Query: 441  YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
                         FD + + N+ SWN+MI+ Y     VD A  LFN+M       + I+W
Sbjct: 344  -------------FDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR----NTISW 386

Query: 501  NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
              +++G+  +G  +  L  L+ +   G  P+ SS++    A + +  L+ G++ H   ++
Sbjct: 387  AGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVK 446

Query: 561  NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
             G  ++ YV  +L+ +Y K   + + +++FD M  ++ V++NS +S      LF  A+ +
Sbjct: 447  AGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDV 506

Query: 621  LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
             N M                                         P+VV+WT++IS   Q
Sbjct: 507  FNNMPS---------------------------------------PDVVSWTTIISACAQ 527

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
             +   E+++ F  M  E   PN   ++ LL   G LG  Q G++IH + +K G      V
Sbjct: 528  ADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVV 587

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            A  L+ MY K  +  S + VF     + + +WN +I G+A +G G+EAI ++  ++  G 
Sbjct: 588  ANALVSMYFKCSSADSLK-VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGV 646

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
             P+ +TF  LL AC +SGLV+EG ++F SMS+DY + P +EHY+CMVDLLG+AG +  A 
Sbjct: 647  LPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAE 706

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
             FI  MP +PD+ IW ALLG+C+IH ++E    A+ +LF +EP N+ NY ++ N+ +   
Sbjct: 707  HFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQG 766

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
             W++V ++R  M E GV      SW+QI   +H F      H     IY  L+ L + +K
Sbjct: 767  MWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLK 826

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
              GYVPDT  V  DIDEE+K   LL H+EKLA+ YGL+ T    PI+++KN R+C DCHT
Sbjct: 827  ATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHT 886

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
              K++S V  REI +RDG RFHHFR G CSC
Sbjct: 887  FIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 238/535 (44%), Gaps = 65/535 (12%)

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
           + A +   G+   +  A ++F  +    D + WN +I     N   +    L        
Sbjct: 36  QSARIRELGRLGRLHEAREVFDSMP-FRDIIAWNSMIFAYCNNGMPDAGRSL-------- 86

Query: 392 AKAIS----RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
           A AIS    RT   +L   A+ G   + ++    V       N    N +++ Y +N  +
Sbjct: 87  ADAISGGNLRTGTILLSGYARAGRVRDARR----VFDGMGVRNTVAWNAMVTCYVQNGDI 142

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            LA ++FD+M   ++SSWN+M++ Y     ++ A +LF +M     + + ++W  ++SG+
Sbjct: 143 TLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMP----ERNGVSWTVMISGY 198

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                +     + R M   G  P   ++  VL AV  L         H  + + G + D+
Sbjct: 199 VLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDV 258

Query: 568 YVGTSLMDMYVKN-DCLQNAQEVFDNMKNRNIVAWNSLI--------------------- 605
            VGT++++ Y K+ + L +A + F+ M  RN   W+++I                     
Sbjct: 259 VVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPL 318

Query: 606 ----------SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
                     +G    G   +AK + +Q+ E    P++VSWN++++GY       EA  +
Sbjct: 319 KSVPSRTSMLTGLARYGRIDDAKILFDQIHE----PNVVSWNAMITGYMQNEMVDEAEDL 374

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
            + M     + N ++W  +I+G  +N    ++L     + ++ + P+ ++++S    C  
Sbjct: 375 FNRMP----FRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSN 430

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
           +  L+ GK++H L +K G   ++YV   LI +Y K  ++ S R++F +   K   S+N  
Sbjct: 431 IEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSF 490

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
           +          EA  +F+ +      PD +++T +++AC  +    E  + F SM
Sbjct: 491 MSALVQNNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQGNEAVEIFRSM 541



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 27/340 (7%)

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           +L  GT L+  Y +   +++A+ VFD M  RN VAWN++++ Y   G    A+K+ + M 
Sbjct: 94  NLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMP 153

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                 D+ SWN++++GY      +EA  +   M       N V+WT +ISG +  E + 
Sbjct: 154 SR----DVSSWNTMLTGYCHSQLMEEARNLFERMPER----NGVSWTVMISGYVLIEQHG 205

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            +   F  M  E + P    + S+L     LG     + IH L  K GF +D  V T ++
Sbjct: 206 RAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAIL 265

Query: 746 DMYSKSGN-LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           + Y+K  N L SA + F   A +   +W+ +I   +  G   +A  +        +Q D 
Sbjct: 266 NGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAV--------YQRDP 317

Query: 805 I----TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
           +    + T++L      G +++    FD +       P +  ++ M+    +   +DEA 
Sbjct: 318 LKSVPSRTSMLTGLARYGRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAE 372

Query: 861 DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
           D    MPF+ +   W  ++     +G  E A ++ + L +
Sbjct: 373 DLFNRMPFR-NTISWAGMIAGYARNGRSEQALVSLQALHR 411


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/715 (35%), Positives = 385/715 (53%), Gaps = 57/715 (7%)

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            S+  AISR          ++G  H  +++  +      +  ++  N ++S Y  ++K   
Sbjct: 21   SNTSAISRY--------GRIGDIHNARKV--FDNTPLPQRTIASWNAMVSAYFESHKPRD 70

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A  +FD M   N  S+N MIS Y   G V  A  +F+ M     + ++++W  ++ G+  
Sbjct: 71   ALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMP----ERNVVSWTSMVRGYVQ 126

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL-DYDLY 568
             G  +    L   M     R N  S +V++       LLK  R      L + + + D+ 
Sbjct: 127  EGMVEEAEKLFWEMP----RRNVVSWTVMIGG-----LLKESRIDDAKKLFDMIPEKDVV 177

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            V T+++  Y +   L  A+E+FD MK RN+  W +++SGY   G    A+K+   M E  
Sbjct: 178  VVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER- 236

Query: 629  IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP---------------------- 666
               + VSW +++ GY+  G+ KEA  +   M    I                        
Sbjct: 237  ---NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFE 293

Query: 667  -----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 +  TW ++I    +     E+L  F +MQ+E +  N  +M S+L  C  L  L +
Sbjct: 294  GMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDH 353

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            G+++H   +++ F +D YVA+ LI MY K G+L  A+ +F +   K +  WN MI G++ 
Sbjct: 354  GRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQ 413

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G G+EA+ +FH++  +G QPD +TF  +L+AC  SG V+EG++ F++M   Y + P IE
Sbjct: 414  HGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIE 473

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+CMVDLLG+AG +DEA + +  MP +PDA +WGALLG+CR H  L+ AE+A  +L KL
Sbjct: 474  HYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKL 533

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS-AEGA 960
            EP N+  Y L+ ++ A   RW DVE LR  ++   +K     SWI++++ VH+F+  +  
Sbjct: 534  EPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVIKFPGC-SWIEVEKKVHMFTGGDSK 592

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP    I   L  L   +++ GY PD   V  D+DEEEK   L  H+E+LA+ YGL+K 
Sbjct: 593  SHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKV 652

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                PIRV+KN RVC DCH+A K ++ V GREI LRD  RFHHF++G CSC D W
Sbjct: 653  PEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 200/453 (44%), Gaps = 42/453 (9%)

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           VE A KLF E+    + + W  +I   L+  + ++A KLF  +       ++     M+ 
Sbjct: 130 VEEAEKLFWEMPR-RNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVT----NMIG 184

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
              +VG   E +++           N+     ++S Y++N ++++A ++F+ M + N  S
Sbjct: 185 GYCQVGRLDEAREL----FDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVS 240

Query: 465 WNSMISSYTGLGYVDVAWSLF---------------------NKMNSSRI------QPDI 497
           W +M+  YT  G +  A+ LF                      +M+ +R+      + D 
Sbjct: 241 WTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDE 300

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            TWN ++      G     L L   MQ  G   N  S+  VL     L  L +GR+ H  
Sbjct: 301 GTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHAR 360

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           ++R+  D DLYV + L+ MYVK   L  A+ +F+    +++V WNS+I+GY   GL   A
Sbjct: 361 LVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEA 420

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLIS 676
             + + M    ++PD V++  ++S  S  G+ KE   I   MK +  + P +  +  ++ 
Sbjct: 421 LNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVD 480

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
              +     E+++   +M  E   P++    +LL  C     L +  E+    L     K
Sbjct: 481 LLGRAGRVDEAMELVEKMPME---PDAIVWGALLGACRNHMKL-DLAEVAVEKLAKLEPK 536

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           +A     L  MY+  G  +   EV RK  N+ +
Sbjct: 537 NAGPYVLLSHMYATKGRWRDV-EVLRKKINRRV 568



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 107/481 (22%), Positives = 203/481 (42%), Gaps = 71/481 (14%)

Query: 419 HGY--VLKSALESNLSVCN--CLISMYSRNNKLELATRVFDS--MKDHNLSSWNSMISSY 472
           +GY   L+  +    S+C+    IS Y R   +  A +VFD+  +    ++SWN+M+S+Y
Sbjct: 3   YGYAATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAY 62

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                   A  LF++M     Q + +++N ++SG+  +G   +   +   M         
Sbjct: 63  FESHKPRDALLLFDQMP----QRNTVSFNGMISGYVKNGMVADARKVFDVMPE------- 111

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
                                      RN + +     TS++  YV+   ++ A+++F  
Sbjct: 112 ---------------------------RNVVSW-----TSMVRGYVQEGMVEEAEKLFWE 139

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           M  RN+V+W  +I G   +    +AKK+ + + E+    D+V   +++ GY   G+  EA
Sbjct: 140 MPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLDEA 195

Query: 653 LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
             +   MK      NV TWT+++SG  +N     + K F  M +     N  + +++L  
Sbjct: 196 RELFDEMK----VRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVSWTAML-- 245

Query: 713 CGGLGLLQNGKEIHCLCLKNGF-IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
              +G  Q+G+      L     +K       +I  +  +G +  AR +F     +   +
Sbjct: 246 ---MGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGT 302

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM- 830
           WN MI  F   G   EA+ LF  +   G   +  +  ++L+ C +   ++ G +    + 
Sbjct: 303 WNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLV 362

Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
            ++++    +   S ++ +  K G L  A        FK D  +W +++     HG  E 
Sbjct: 363 RSEFD--QDLYVASVLITMYVKCGDLVRAKGIFNRFLFK-DVVMWNSMITGYSQHGLGEE 419

Query: 891 A 891
           A
Sbjct: 420 A 420



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 133/290 (45%), Gaps = 7/290 (2%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  +   G+   A   F     R    W++ ++ +E  G ++ E L ++  +  +GV  
Sbjct: 275 MILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDL-EALGLFARMQREGVAL 333

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               +  +L +C  L +   G +VHA L++  FD D+++   L+  Y KC D+  A  +F
Sbjct: 334 NFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIF 393

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
           +     +D ++WN +I    ++   E A+ +F +M  S  +    T + +L AC+  G  
Sbjct: 394 NRFL-FKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKV 452

Query: 413 HEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS 470
            EG +I         +E  +    C++ +  R  +++ A  + + M  + +   W +++ 
Sbjct: 453 KEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLG 512

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTL 519
           +      +D+A     K+  ++++P       LLS  + T G +++V  L
Sbjct: 513 ACRNHMKLDLAEVAVEKL--AKLEPKNAGPYVLLSHMYATKGRWRDVEVL 560


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  434 bits (1117), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/630 (35%), Positives = 367/630 (58%), Gaps = 39/630 (6%)

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            A+ +F+KM     + +++TW  +++     G  ++ + L   M+  G+ P+  + S VL 
Sbjct: 9    AYKVFDKMP----ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 64

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDNMKNRN 597
            A TEL LL  G++ H  ++R GL  D+ VG SL+DMY K   +  + ++++VF+ M   N
Sbjct: 65   ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 124

Query: 598  IVAWNSLISGYCFKG-LFVNAKKMLNQMEEEEIKPDLVSWNSLV----------SGYSIW 646
            +++W ++I+ Y   G     A ++  +M    I+P+  S++S++          +G  ++
Sbjct: 125  VMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 184

Query: 647  GQS-KEALVIIHHMKNSGIY--------------------PNVVTWTSLISGSLQNENYR 685
              + K  +  ++ + NS I                      N+V++ +++ G  +N    
Sbjct: 185  SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 244

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            E+   F ++    I  ++ T +SLL     +G +  G++IH   LK G+  +  +   LI
Sbjct: 245  EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 304

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
             MYS+ GN+++A +VF +  ++ + SW  MI GFA +G    A+ +FH++LETG +P+ I
Sbjct: 305  SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 364

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            T+ A+L+AC + G++ EG K+F+SM  ++ I+P +EHY+CMVDLLG++G L EA +FI +
Sbjct: 365  TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 424

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP   DA +W  LLG+CR+HG+ E    A+  + + EP + A Y L+ NL A + +W+DV
Sbjct: 425  MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 484

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
             ++R SM E  +      SWI+++  VH F      HP   +IY EL  L S++K++GY+
Sbjct: 485  VKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYI 544

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            PDT  V  DI+EE+K + L  H+EK+A+ +GL+ T    PIR+ KN RVC DCHTA KY+
Sbjct: 545  PDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYI 604

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S+  GREI +RD  RFHH + G CSCND W
Sbjct: 605  SMATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 209/435 (48%), Gaps = 42/435 (9%)

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           A K F     R+   W+  +  +   G   ++ ++++ ++   G +      + +L  CT
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGC-ARDAIDLFLDMELSGYVPDRFTYSSVLSACT 67

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR---DVESANKLFSEVSDLEDDL 362
           +L    LG ++H+ +I+ G   DV + C+L++ Y KC     V+ + K+F ++ +  + +
Sbjct: 68  ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVM 126

Query: 363 LWNEIIMVKLRN-EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
            W  II    ++ E  + AI+LF +M     +    +   +L+AC  +   + G+Q++ Y
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            +K  + S   V N LISMY+R+ ++E A + FD + + NL S+N+++  Y      + A
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
           + LFN++  + I     T+  LLSG  + G+                             
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGA----------------------------- 277

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                 +  G + HG +L+ G   +  +  +L+ MY +   ++ A +VF+ M++RN+++W
Sbjct: 278 ------MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 331

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-K 660
            S+I+G+   G    A +M ++M E   KP+ +++ +++S  S  G   E     + M K
Sbjct: 332 TSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 391

Query: 661 NSGIYPNVVTWTSLI 675
             GI P +  +  ++
Sbjct: 392 EHGIVPRMEHYACMV 406



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 3/267 (1%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           G    + K F      +   W++ +  Y   G   +E +E++ ++    +       + +
Sbjct: 108 GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSV 167

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LK C  L   + G +V++  +K G      +  +L++ Y +   +E A K F  +   E 
Sbjct: 168 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL--FEK 225

Query: 361 DLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +L+ +N I+    +N K E A  LF E+  +     + T   +L   A +GA  +G+QIH
Sbjct: 226 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 285

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G +LK   +SN  +CN LISMYSR   +E A +VF+ M+D N+ SW SMI+ +   G+  
Sbjct: 286 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 345

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSG 506
            A  +F+KM  +  +P+ IT+  +LS 
Sbjct: 346 RALEMFHKMLETGTKPNEITYVAVLSA 372



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 134/296 (45%), Gaps = 7/296 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  Y   G    A KAF + F ++   +++ ++ Y     + +E   ++ E+   G+ 
Sbjct: 201 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGIG 259

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +     +L     + A   G ++H  L+K G+  +  +  AL++ Y +C ++E+A ++
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+E+ D  + + W  +I    ++     A+++F +M  +  K    T V +L AC+ VG 
Sbjct: 320 FNEMED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 378

Query: 412 FHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             EG K  +    +  +   +    C++ +  R+  L  A    +SM    +   W +++
Sbjct: 379 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 438

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTHGSYQNVLTLLRGMQ 524
            +    G  ++       +     +PD      LLS  H + G +++V+ + + M+
Sbjct: 439 GACRVHGNTELGRHAAEMILEQ--EPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 492


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
            mitochondrial-like [Glycine max]
          Length = 711

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 251/708 (35%), Positives = 381/708 (53%), Gaps = 35/708 (4%)

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL--KSALESN 430
            RN + ++A K+F E         S          A V A+ E +Q    +L  +   + N
Sbjct: 34   RNGQLDHARKVFDETPLPHRTVSSWN--------AMVAAYFEARQPREALLLFEKMPQRN 85

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
                N LIS + +N  L  A RVFD+M D N+ SW SM+  Y   G V  A  LF  M  
Sbjct: 86   TVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP- 144

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV--VLQAVTELRLL 548
                 ++++W  +L G    G   +   L   M      P    V+V  ++    E   L
Sbjct: 145  ---HKNVVSWTVMLGGLLQEGRVDDARKLFDMM------PEKDVVAVTNMIGGYCEEGRL 195

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
               R     + +     ++   T+++  Y +N  +  A+++F+ M  RN V+W +++ GY
Sbjct: 196  DEARALFDEMPKR----NVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGY 251

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
               G    A  + + M    +KP +V  N ++ G+ + G+  +A  +   MK      + 
Sbjct: 252  THSGRMREASSLFDAMP---VKP-VVVCNEMIMGFGLNGEVDKARRVFKGMKER----DN 303

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
             TW+++I    +     E+L  F +MQ+E +  N  ++ S+L  C  L  L +GK++H  
Sbjct: 304  GTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQ 363

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             +++ F +D YVA+ LI MY K GNL  A++VF +   K +  WN MI G++ +G G+EA
Sbjct: 364  LVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEA 423

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            + +FH++  +G  PD +TF  +L+AC  SG V+EG + F++M   Y + P IEHY+C+VD
Sbjct: 424  LNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVD 483

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+A  ++EA   +  MP +PDA +WGALLG+CR H  L+ AE+A  +L +LEP N+  
Sbjct: 484  LLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 543

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS-AEGAPHPATGE 967
            Y L+ N+ A   RW DVE LR  +    V  +   SWI++++ VH+F+  +   HP    
Sbjct: 544  YVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPI 603

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I   L  L   +++ GY PD   V  D+DEEEK   L  H+EKLA+ YGL+K     PIR
Sbjct: 604  IMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIR 663

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V+KN RVC DCH+A K ++ V GREI LRD  RFHHF++G CSC D W
Sbjct: 664  VMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 1/186 (0%)

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           +G   +V+ A ++F  + +  D+  W+ +I V  R      A+ LFR MQ         +
Sbjct: 282 FGLNGEVDKARRVFKGMKE-RDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPS 340

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           ++ +L  C  + +   GKQ+H  +++S  + +L V + LI+MY +   L  A +VF+   
Sbjct: 341 LISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFP 400

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
             ++  WNSMI+ Y+  G  + A ++F+ M SS + PD +T+  +LS     G  +  L 
Sbjct: 401 LKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLE 460

Query: 519 LLRGMQ 524
           L   M+
Sbjct: 461 LFETMK 466



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 135/282 (47%), Gaps = 7/282 (2%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           G+   A + F     R    WS+ ++ YE  G E+ E L ++  +  +G+      L  +
Sbjct: 286 GEVDKARRVFKGMKERDNGTWSAMIKVYERKGYEL-EALGLFRRMQREGLALNFPSLISV 344

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L +C  L +   G +VHA L++  FD D+++   L+  Y KC ++  A ++F+    L+D
Sbjct: 345 LSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFP-LKD 403

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
            ++WN +I    ++   E A+ +F +M  S       T + +L AC+  G   EG ++  
Sbjct: 404 VVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFE 463

Query: 421 YV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYV 478
            +  K  +E  +    CL+ +  R +++  A ++ + M  + +   W +++ +      +
Sbjct: 464 TMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKL 523

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTL 519
           D+A     K+  ++++P       LLS  + + G +++V  L
Sbjct: 524 DLAEVAVEKL--AQLEPKNAGPYVLLSNMYAYKGRWRDVEVL 563


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/630 (35%), Positives = 367/630 (58%), Gaps = 39/630 (6%)

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            A+ +F+KM     + +++TW  +++     G  ++ + L   M+  G+ P+  + S VL 
Sbjct: 4    AYKVFDKMP----ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 59

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDNMKNRN 597
            A TEL LL  G++ H  ++R GL  D+ VG SL+DMY K   +  + ++++VF+ M   N
Sbjct: 60   ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 119

Query: 598  IVAWNSLISGYCFKG-LFVNAKKMLNQMEEEEIKPDLVSWNSLV----------SGYSIW 646
            +++W ++I+ Y   G     A ++  +M    I+P+  S++S++          +G  ++
Sbjct: 120  VMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 179

Query: 647  GQS-KEALVIIHHMKNSGIY--------------------PNVVTWTSLISGSLQNENYR 685
              + K  +  ++ + NS I                      N+V++ +++ G  +N    
Sbjct: 180  SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 239

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            E+   F ++    I  ++ T +SLL     +G +  G++IH   LK G+  +  +   LI
Sbjct: 240  EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 299

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
             MYS+ GN+++A +VF +  ++ + SW  MI GFA +G    A+ +FH++LETG +P+ I
Sbjct: 300  SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 359

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            T+ A+L+AC + G++ EG K+F+SM  ++ I+P +EHY+CMVDLLG++G L EA +FI +
Sbjct: 360  TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 419

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP   DA +W  LLG+CR+HG+ E    A+  + + EP + A Y L+ NL A + +W+DV
Sbjct: 420  MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 479

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
             ++R SM E  +      SWI+++  VH F      HP   +IY EL  L S++K++GY+
Sbjct: 480  VKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYI 539

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            PDT  V  DI+EE+K + L  H+EK+A+ +GL+ T    PIR+ KN RVC DCHTA KY+
Sbjct: 540  PDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYI 599

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S+  GREI +RD  RFHH + G CSCND W
Sbjct: 600  SMATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 209/435 (48%), Gaps = 42/435 (9%)

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           A K F     R+   W+  +  +   G   ++ ++++ ++   G +      + +L  CT
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGC-ARDAIDLFLDMELSGYVPDRFTYSSVLSACT 62

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR---DVESANKLFSEVSDLEDDL 362
           +L    LG ++H+ +I+ G   DV + C+L++ Y KC     V+ + K+F ++ +  + +
Sbjct: 63  ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVM 121

Query: 363 LWNEIIMVKLRN-EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
            W  II    ++ E  + AI+LF +M     +    +   +L+AC  +   + G+Q++ Y
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            +K  + S   V N LISMY+R+ ++E A + FD + + NL S+N+++  Y      + A
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
           + LFN++  + I     T+  LLSG  + G+                             
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGA----------------------------- 272

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                 +  G + HG +L+ G   +  +  +L+ MY +   ++ A +VF+ M++RN+++W
Sbjct: 273 ------MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 326

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-K 660
            S+I+G+   G    A +M ++M E   KP+ +++ +++S  S  G   E     + M K
Sbjct: 327 TSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 386

Query: 661 NSGIYPNVVTWTSLI 675
             GI P +  +  ++
Sbjct: 387 EHGIVPRMEHYACMV 401



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 3/267 (1%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           G    + K F      +   W++ +  Y   G   +E +E++ ++    +       + +
Sbjct: 103 GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSV 162

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LK C  L   + G +V++  +K G      +  +L++ Y +   +E A K F  +   E 
Sbjct: 163 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL--FEK 220

Query: 361 DLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +L+ +N I+    +N K E A  LF E+  +     + T   +L   A +GA  +G+QIH
Sbjct: 221 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 280

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G +LK   +SN  +CN LISMYSR   +E A +VF+ M+D N+ SW SMI+ +   G+  
Sbjct: 281 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 340

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSG 506
            A  +F+KM  +  +P+ IT+  +LS 
Sbjct: 341 RALEMFHKMLETGTKPNEITYVAVLSA 367



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 134/296 (45%), Gaps = 7/296 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  Y   G    A KAF + F ++   +++ ++ Y     + +E   ++ E+   G+ 
Sbjct: 196 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGIG 254

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +     +L     + A   G ++H  L+K G+  +  +  AL++ Y +C ++E+A ++
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+E+ D  + + W  +I    ++     A+++F +M  +  K    T V +L AC+ VG 
Sbjct: 315 FNEMED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 373

Query: 412 FHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             EG K  +    +  +   +    C++ +  R+  L  A    +SM    +   W +++
Sbjct: 374 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 433

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTHGSYQNVLTLLRGMQ 524
            +    G  ++       +     +PD      LLS  H + G +++V+ + + M+
Sbjct: 434 GACRVHGNTELGRHAAEMILEQ--EPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 487


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 251/766 (32%), Positives = 388/766 (50%), Gaps = 120/766 (15%)

Query: 398  TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            T+  +L+AC ++ ++  G   HG +  +  ESN+ +CN L++MYSR   LE A+ +FD +
Sbjct: 12   TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 71

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
                +                                 D+I+WN ++S H    +    L
Sbjct: 72   TQRGID--------------------------------DVISWNSIVSAHVKSSNAWTAL 99

Query: 518  TLLRGM------QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
             L   M      +    R +  S+  +L A   L+ +   +E HG  +RNG   D++VG 
Sbjct: 100  DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN 159

Query: 572  SLMDMYVKNDCLQNAQEVFD-------------------------------NMKNRNI-- 598
            +L+D Y K   ++NA +VF+                               NM+  NI  
Sbjct: 160  ALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL 219

Query: 599  --VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------------- 642
              V W ++I+GY  +G    A  +  QM      P+ V+  S++S               
Sbjct: 220  DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 279

Query: 643  -YSI----------WGQSKEALVIIHHMKN-----------SGIYP-------NVVTWTS 673
             YS+          +G   E L++ + + +             I+        NVVTWT 
Sbjct: 280  AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 339

Query: 674  LISGSLQNENYRESLKFFIQMQQED--IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            +I G  Q  +  ++LK F++M  E   + PN+ T+S +L  C  L  ++ GK+IH   L+
Sbjct: 340  MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 399

Query: 732  N-GFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            +  +   AY VA  LI+MYSK G++ +AR VF   + K+  SW  M+ G+ ++G G EA+
Sbjct: 400  HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 459

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             +F ++ + GF PD ITF  +L AC + G+V++G  YFDSMS DY + P  EHY+  +DL
Sbjct: 460  DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL 519

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L + G LD+AW  ++ MP +P A +W ALL +CR+H ++E AE A  +L ++   N  +Y
Sbjct: 520  LARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 579

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N+ A + RW+DV R+RH M + G+K     SW+Q  +    F      HP + +IY
Sbjct: 580  TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIY 639

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
              L  L+  +K +GYVP+T     D+DEEEK  +L+ H+EKLA+ YGL+ T    PIR+ 
Sbjct: 640  ALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRIT 699

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVC DCH+A  Y+S +   EI +RD +RFHHF+ G CSC   W
Sbjct: 700  KNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/565 (24%), Positives = 253/565 (44%), Gaps = 57/565 (10%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +LK C +L ++  G   H  +   GF+ +V +  AL+  Y +C  +E A+ +F E++
Sbjct: 13  LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 72

Query: 357 D--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQF------SSAKAISRTIVKMLQACAK 408
              ++D + WN I+   +++     A+ LF +M        ++ ++   +IV +L AC  
Sbjct: 73  QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 132

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A  + K++HG  +++    ++ V N LI  Y++   +E A +VF+ M+  ++ SWN+M
Sbjct: 133 LKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 192

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           ++ Y+  G    A+ LF  M    I  D++TW  +++G+   G     L + R M   G 
Sbjct: 193 VAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGS 252

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRN----------GLDYDLYVGTSLMDMYV 578
            PN  ++  VL A   L     G E H Y L+N          G D DL V  +L+DMY 
Sbjct: 253 LPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 312

Query: 579 KNDCLQNAQEVFDN--MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE--IKPDLV 634
           K    + A+ +FD+  ++ RN+V W  +I G+   G   +A K+  +M  E   + P+  
Sbjct: 313 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 372

Query: 635 SWNSLVSGYSIW-----GQSKEALVIIHHMKNSGIY------------------------ 665
           + + ++   +       G+   A V+ HH  +S  Y                        
Sbjct: 373 TISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFD 432

Query: 666 ----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                + ++WTS+++G   +    E+L  F +M++    P+  T   +L  C   G++  
Sbjct: 433 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 492

Query: 722 G-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWNCMIMGF 779
           G      +    G    A      ID+ ++ G L  A + V       T   W  ++   
Sbjct: 493 GLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSAC 552

Query: 780 AIYGNGKEAILLFHELLETGFQPDA 804
            ++ N + A    ++L+E   + D 
Sbjct: 553 RVHSNVELAEHALNKLVEMNAENDG 577



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 195/459 (42%), Gaps = 101/459 (22%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M   G R +  ++  VL+A  EL   + G   HG I  NG + ++++  +L+ MY +   
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 583 LQNAQEVFDNMKNR---NIVAWNSLISGYCFKG-------LFVNAKKMLNQMEEEE---- 628
           L+ A  +FD +  R   ++++WNS++S +           LF     ++++    E    
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 629 -----IKP-------------------------DLVSWNSLVSGYSIWGQSKEALVIIHH 658
                I P                         D+   N+L+  Y+  G  + A+ + + 
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 659 MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK------------------ 700
           M+    + +VV+W ++++G  Q+ N++ + + F  M++E+I                   
Sbjct: 181 ME----FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGC 236

Query: 701 -----------------PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN----------G 733
                            PN  T+ S+L  C  LG    G EIH   LKN          G
Sbjct: 237 SHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGG 296

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSA--NKTLASWNCMIMGFAIYGNGKEAILL 791
             +D  V   LIDMYSK  + K+AR +F       + + +W  MI G A YG+  +A+ L
Sbjct: 297 EDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 356

Query: 792 FHELLET--GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY--SCMV 847
           F E++    G  P+A T + +L AC +   +  G K   +    ++   +  ++  +C++
Sbjct: 357 FVEMISEPYGVAPNAYTISCILMACAHLAAIRIG-KQIHAYVLRHHQYDSSAYFVANCLI 415

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           ++  K G +D A     +M  K  A  W +++    +HG
Sbjct: 416 NMYSKCGDVDTARHVFDSMSQK-SAISWTSMMTGYGMHG 453



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 177/420 (42%), Gaps = 52/420 (12%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  Y   G    E L V+ ++   G +     +  +L  C  L AF  G+E+HA  
Sbjct: 224 WTAVIAGYSQRGCS-HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYS 282

Query: 321 IKR----------GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIM 369
           +K           G D D+ +  AL++ Y KCR  ++A  +F ++   E +++ W  +I 
Sbjct: 283 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 342

Query: 370 VKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
              +     +A+KLF EM  +       + TI  +L ACA + A   GKQIH YVL+   
Sbjct: 343 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQ 402

Query: 428 --ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
              S   V NCLI+MYS+   ++ A  VFDSM   +  SW SM++ Y   G    A  +F
Sbjct: 403 YDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 462

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAVTE 544
           +KM  +   PD IT+  +L      G     L+    M +  G  P     +  +     
Sbjct: 463 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL--- 519

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             L ++GR    +                             + V D       V W +L
Sbjct: 520 --LARFGRLDKAW-----------------------------KTVKDMPMEPTAVVWVAL 548

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           +S          A+  LN++ E   + D  S+  + + Y+  G+ K+   I H MK SGI
Sbjct: 549 LSACRVHSNVELAEHALNKLVEMNAEND-GSYTLISNIYATAGRWKDVARIRHLMKKSGI 607


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 738

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/674 (35%), Positives = 362/674 (53%), Gaps = 78/674 (11%)

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            IS +  L Y   A  LF  +     QP+   WN ++ G+    S    +     M   G 
Sbjct: 76   ISPFGNLSY---ALLLFESIE----QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGV 128

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND------- 581
             PN  +   +L++  ++   + G++ HG++L+ GL+ D +V TSL++MY +N        
Sbjct: 129  EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188

Query: 582  ------------------------CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
                                    CL +A+ +F+ +  R+ V+WN++I+GY   G F  A
Sbjct: 189  VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEA 248

Query: 618  KKMLNQMEEEEIKPD----------------------LVSW-------------NSLVSG 642
                 +M+   + P+                      + SW             N+L+  
Sbjct: 249  LAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDM 308

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
            YS  G   +A  +   +       ++++W  +I G     +Y+E+L  F +MQQ +++PN
Sbjct: 309  YSKCGDLDKARDLFEGICEK----DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPN 364

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF-IKDAYVATGLIDMYSKSGNLKSAREVF 761
              T  S+L  C  LG L  GK IH    K    + +  + T LIDMY+K GN+++A++VF
Sbjct: 365  DVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVF 424

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                 K+L SWN MI G A++G+   A+ LF ++ + GF+PD ITF  +L+AC ++GLVE
Sbjct: 425  AGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVE 484

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
             G + F SM  DY+I P ++HY CM+DLLG+AG  DEA   ++ M  KPD  IWG+LLG+
Sbjct: 485  LGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGA 544

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CR+HG++E  E A++ LF+LEP N   Y L+ N+ A + RW+DV R+R  +++ G+K V 
Sbjct: 545  CRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVP 604

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              S I++D +VH F      H  + +IY  L  +   ++K G+VPDT  V  D+DEE K 
Sbjct: 605  GCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKE 664

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
              L  H+EKLAI +GL+ TK    IR++KN RVC +CH+A K +S +  REI  RD  RF
Sbjct: 665  GSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRF 724

Query: 1062 HHFREGECSCNDCW 1075
            HHF++G CSC D W
Sbjct: 725  HHFKDGSCSCMDYW 738



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 254/586 (43%), Gaps = 90/586 (15%)

Query: 164 PNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKI 223
           P ++   PTS   PP   L     L+ +S+   F N          +K  H+Q+IK G +
Sbjct: 14  PPTLHFQPTSD--PPYKLLQNHPSLTLLSTCKSFQN----------LKQIHSQIIKTG-L 60

Query: 224 WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLE 280
            N+   +  LI  +     F + + A  L+ S    +   W++ +    S        ++
Sbjct: 61  HNTQFALSKLI-EFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRG-NSLSSSPVGAID 118

Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
            +  +   GV   S     +LK C K+ A   G ++H  ++K G + D  +  +L+N Y 
Sbjct: 119 FYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYA 178

Query: 341 K---------------CRD----------------VESANKLFSEVSDLEDDLLWNEIIM 369
           +                RD                ++ A +LF E+  + D + WN +I 
Sbjct: 179 QNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP-VRDAVSWNAMIA 237

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
              ++ ++E A+  F+EM+ ++      T+V +L ACA+ G+   G  +  ++    L S
Sbjct: 238 GYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGS 297

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           NL + N LI MYS+   L+ A  +F+ + + ++ SWN MI  Y+ +     A +LF KM 
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
            S ++P+ +T+                                  VS +L A   L  L 
Sbjct: 358 QSNVEPNDVTF----------------------------------VS-ILPACAYLGALD 382

Query: 550 YGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
            G+  H YI +  L   +  + TSL+DMY K   ++ A++VF  MK +++ +WN++ISG 
Sbjct: 383 LGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGL 442

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPN 667
              G    A ++  QM +E  +PD +++  ++S  S  G  +        M ++  I P 
Sbjct: 443 AMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPK 502

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +  +  +I    +   + E+      M+  ++KP+     SLL  C
Sbjct: 503 LQHYGCMIDLLGRAGLFDEAEAL---MKNMEMKPDGAIWGSLLGAC 545



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 135/315 (42%), Gaps = 10/315 (3%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +V +LI  Y + GD   A   F     +    W+  +  Y S     +E L ++ ++   
Sbjct: 301 LVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGY-SHMNSYKEALALFRKMQQS 359

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVES 347
            V         IL  C  L A  LG  +HA + K+     +  L  +L++ Y KC ++E+
Sbjct: 360 NVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEA 419

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A ++F+ +   +    WN +I     +     A++LFR+M+    +    T V +L AC+
Sbjct: 420 AKQVFAGMKP-KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478

Query: 408 KVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSW 465
             G    G+Q    +++   +   L    C+I +  R    + A  +  +M+   + + W
Sbjct: 479 HAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIW 538

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQ 524
            S++ +    G V++    F   +   ++P+      LLS  + T G + +V  +   + 
Sbjct: 539 GSLLGACRVHGNVELGE--FAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLN 596

Query: 525 SLGFR--PNGSSVSV 537
             G +  P  SS+ V
Sbjct: 597 DKGMKKVPGCSSIEV 611


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/804 (31%), Positives = 396/804 (49%), Gaps = 126/804 (15%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN ++   ++    + AI +   M  +  K    T+   L+AC ++ ++  G+ +HG + 
Sbjct: 117  WNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLIC 176

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             +  ESN+ VCN L++MYSR   LE A+ VFD +    +                     
Sbjct: 177  CNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGID-------------------- 216

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM------QSLGFRPNGSSVSV 537
                        D+I+WN +++ H    + +  L L   M      ++   R +  S+  
Sbjct: 217  ------------DVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK----NDCLQ--------- 584
            +L A   L+ L   +E H Y +RNG   D +V  +L+D Y K    ND ++         
Sbjct: 265  ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324

Query: 585  ------------------NAQEVFDNMKNRNI----VAWNSLISGYCFKGLFVNAKKMLN 622
                               A E+F+NM+  NI    + W+++I+GY  +G    A     
Sbjct: 325  VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384

Query: 623  QMEEEEIKPD-----------------------------------------------LVS 635
            QM  +  +P+                                               L+ 
Sbjct: 385  QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            +N+L+  YS     K A  I   +       NVVTWT +I G  Q  +  ++LK F +M 
Sbjct: 445  YNALIDMYSKCRSFKAARSIFDSIPRR--ERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502

Query: 696  QED--IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA--YVATGLIDMYSKS 751
             +   + PN+ T+S +L  C  L  L+ GK+IH    ++   + +  +VA  LIDMYSK 
Sbjct: 503  SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G++ +AR VF     +   SW  M+ G+ ++G GKEA+ +F ++ + GF PD I+F  LL
Sbjct: 563  GDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             AC +SG+V++G  YFD M  DY+++ + EHY+C++DLL + G LD+AW  I+ MP +P 
Sbjct: 623  YACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPS 682

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A IW ALL +CR+H ++E AE A  +L  ++  N  +Y L+ N+ A + RW+DV R+R  
Sbjct: 683  AVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQL 742

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M + G+K     SW+Q  +    F      HP + EIY  L  L+  +K +GYVP+T   
Sbjct: 743  MKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFA 802

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+D+EEK  +L  H+EKLA+ YGL+ T    PIR+ KN RVC DCH+A  Y+S +   
Sbjct: 803  LHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDH 862

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD +RFHHF+ G CSC   W
Sbjct: 863  EIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 256/583 (43%), Gaps = 92/583 (15%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L   LK C +L ++  G  +H  +   GF+ +V +  AL+  Y +C  +E A+ +F E++
Sbjct: 152 LPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEIT 211

Query: 357 --DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF------SSAKAISRTIVKMLQACAK 408
              ++D + WN I+   ++      A++LF EM        ++ ++   +IV +L ACA 
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACAS 271

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A  + K+IH Y +++   ++  VCN LI  Y++   +  A +VF+ M+  ++ SWN+M
Sbjct: 272 LKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAM 331

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           ++ YT  G    A+ LF  M    I  D+ITW+ +++G+   G  Q  L   + M   G 
Sbjct: 332 VTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGS 391

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL------------DYDLYVGTSLMDM 576
            PN  ++  +L A   L  L  G E H Y L+  L              DL V  +L+DM
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDM 451

Query: 577 YVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEIKPD 632
           Y K    + A+ +FD++  + RN+V W  +I GY   G   +A K+ ++M  +   + P+
Sbjct: 452 YSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPN 511

Query: 633 LVSWNSLVSGYS-----IWGQSKEALVIIHHMKNSGIY---------------------- 665
             + + ++   +       G+   A V  HH     +Y                      
Sbjct: 512 AYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNV 571

Query: 666 ------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
                  N V+WTS++SG   +   +E+L  F +MQ+    P+  +   LL  C   G++
Sbjct: 572 FDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMV 631

Query: 720 QNGKEIHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
             G     +  ++   +  A     +ID+ ++ G L  A                     
Sbjct: 632 DQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKA--------------------- 670

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                        +  + E   +P A+ + ALL+AC+    VE
Sbjct: 671 -------------WKTIQEMPMEPSAVIWVALLSACRVHSNVE 700



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 220/513 (42%), Gaps = 101/513 (19%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +++SY   G    A S+  ++  S      + WN L+  H   G     + +   M   G
Sbjct: 89  VVASYLACGATKDALSVLERVTPS----PAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            +P+  ++   L+A  EL     GR  HG I  NG + +++V  +L+ MY +   L++A 
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204

Query: 588 EVFDNMKNR---NIVAWNSLISGYCFKG--------LFVNAKKMLNQMEEEEIKPDLVS- 635
            VFD +  +   ++++WNS+++ +  KG        LF     ++++    E + D++S 
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAH-VKGSNPRTALELFSEMSMIVHEKATNE-RSDIISI 262

Query: 636 ----------------------------------WNSLVSGYSIWGQSKEALVIIHHM-- 659
                                              N+L+  Y+  G   +A+ + + M  
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322

Query: 660 -----------------------------KNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
                                        +   I  +V+TW+++I+G  Q    +E+L  
Sbjct: 323 KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK------------DA 738
           F QM  +  +PNS T+ SLL  C  LG L  G EIH   LK   +             D 
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 739 YVATGLIDMYSKSGNLKSAREVFRK--SANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            V   LIDMYSK  + K+AR +F       + + +W  MI G+A YG+  +A+ +F E++
Sbjct: 443 MVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502

Query: 797 ETGF--QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS-CMVDLLGKA 853
              +   P+A T + +L AC +   +  G +    ++  +   P++   + C++D+  K 
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           G +D A +   +MP K +   W +++    +HG
Sbjct: 563 GDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHG 594



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 163/360 (45%), Gaps = 34/360 (9%)

Query: 176 LPPTDTLAKQAQLSCISSGFCFLNET--NKFRC--LSSVKSKHAQMIKMGKIWNS---DD 228
           LP   +L    Q+  I S +   N T  + F C  L    +K   M    K++N     D
Sbjct: 266 LPACASLKALPQIKEIHS-YAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324

Query: 229 MVK--SLIFHYLEFGDFTSAAKAFFLYFSRSYA----DWSSFLEDYESFGGEVQELLEVW 282
           +V   +++  Y + G+F +A + F      +       WS+ +  Y   G   QE L+ +
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCS-QEALDAF 383

Query: 283 GELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF------------DFDVH 330
            ++   G    S  +  +L  C  L A   G+E+HA  +K+                D+ 
Sbjct: 384 QQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLM 443

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQF 389
           +  AL++ Y KCR  ++A  +F  +   E +++ W  +I    +     +A+K+F EM  
Sbjct: 444 VYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEM-I 502

Query: 390 SSAKAISR---TIVKMLQACAKVGAFHEGKQIHGYVLK--SALESNLSVCNCLISMYSRN 444
           S   A++    TI  +L ACA + A   GKQIH YV +      S   V NCLI MYS+ 
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             ++ A  VFDSM   N  SW SM+S Y   G    A  +F+KM  +   PD I++  LL
Sbjct: 563 GDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 256/781 (32%), Positives = 396/781 (50%), Gaps = 90/781 (11%)

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA--IKLFREMQFSSAKAISRTIVKM 402
            +  A+ LF ++    D   +N++I     +     A  + L+R M        + T    
Sbjct: 73   LSRAHHLFDQIPS-PDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFA 131

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            L+AC+ +   H G+ IH + + + L+++L V   L+ MY +   L  A  +F +M     
Sbjct: 132  LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR-- 189

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
                                             D++ WN +L+G+  HG Y + +  L  
Sbjct: 190  ---------------------------------DLVAWNAMLAGYAHHGMYHHAVAHLLS 216

Query: 523  MQSL--GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD----------LYVG 570
            MQ      RPN S++  +L  + +   L  G   H Y +R  L  +          + +G
Sbjct: 217  MQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLG 276

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA----KKMLNQ--- 623
            T+L+DMY K   L  A+ VFD M  RN V W++LI G+        A    K ML Q   
Sbjct: 277  TALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 336

Query: 624  -----------------------------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                                         + +  +  DL + NSL+S Y+  G   +A+ 
Sbjct: 337  FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 396

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            +   M       + V++++L+SG +QN    E+   F +MQ  +++P++ TM SL+  C 
Sbjct: 397  LFDEMA----VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACS 452

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             L  LQ+G+  H   +  G   +  +   LIDMY+K G +  +R+VF    ++ + SWN 
Sbjct: 453  HLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNT 512

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MI G+ I+G GKEA  LF E+   GF PD +TF  LL+AC +SGLV EG  +F  M   Y
Sbjct: 513  MIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGY 572

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             + P +EHY CMVDLL + G+LDEA++FI++MP + D  +W ALLG+CR++ +++  +  
Sbjct: 573  GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKV 632

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            SR + +L P  + N+ L+ N+ + + R+++   +R      G K     SWI+I+  +H 
Sbjct: 633  SRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHA 692

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP + EIY EL +++  +KKLGY PDT  V QD++EEEK K L+ H+EKLAI 
Sbjct: 693  FVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIA 752

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            YG++       I V KN RVC DCHT  K++SL++ R I +RD  RFHHF+ G+CSC D 
Sbjct: 753  YGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDF 812

Query: 1075 W 1075
            W
Sbjct: 813  W 813



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 212/462 (45%), Gaps = 62/462 (13%)

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG--SYQNVLTLLRGMQSLGFRPNGS 533
           G++  A  LF+++ S    PD+ T+N L+  + +    +  + L L R M      PN  
Sbjct: 71  GHLSRAHHLFDQIPS----PDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           +    L+A + L     GR  H + +  GL  DL+V T+L+DMYVK  CL +A  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKML--NQMEEEEIKPD----------LVSWNSLVS 641
             R++VAWN++++GY   G++ +A   L   QM+   ++P+          L    +L  
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 642 GYSIWG-------------QSK--------EALVIIHHMKNSGIYP----------NVVT 670
           G S+               +SK         AL+ ++    S +Y           N VT
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIK-PNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           W++LI G +      ++   F  M  + +   + T+++S L+ C  L  L+ G+++H L 
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            K+G   D      L+ MY+K+G +  A  +F + A K   S++ ++ G+   G  +EA 
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426

Query: 790 LLFHELLETGFQPDAITFTALLAACKN-----SGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
           L+F ++     +PDA T  +L+ AC +      G    G      ++++ +I       +
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC------N 480

Query: 845 CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            ++D+  K G +D +      MP + D   W  ++    IHG
Sbjct: 481 ALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG 521



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 123/544 (22%), Positives = 226/544 (41%), Gaps = 93/544 (17%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LK C+ L     G  +H   I  G   D+ +  AL++ Y KC  +  A  +F+ +    D
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA-RD 190

Query: 361 DLLWNEIIMVKLRNEKWENAIK--LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            + WN ++     +  + +A+   L  +MQ    +  + T+V +L   A+ GA  +G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 419 HGYVLKSALESN----------LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           H Y +++ L SN          + +   L+ MY++   L  A RVFD+M   N  +W+++
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 469 ISSYTGLGYVDVAWSLFNKM------------------------------------NSSR 492
           I  +     +  A+ LF  M                                      S 
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 493 IQPDIITWNCLLS-------------------------------GHFTHGSYQNVLTLLR 521
           +  D+   N LLS                               G+  +G  +    + +
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            MQ+    P+ +++  ++ A + L  L++GR SHG ++  GL  +  +  +L+DMY K  
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            +  +++VF+ M +R+IV+WN++I+GY   GL   A  +  +M      PD V++  L+S
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 642 GYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             S  G   E     H M++  G+ P +  +  ++    +     E+ +F   +Q   ++
Sbjct: 551 ACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF---IQSMPLR 607

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG----LIDMYSKSGNLKS 756
            +     +LL  C     +  GK++  +  + G        TG    L ++YS +G    
Sbjct: 608 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELG-----PEGTGNFVLLSNIYSAAGRFDE 662

Query: 757 AREV 760
           A EV
Sbjct: 663 AAEV 666



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 267/581 (45%), Gaps = 76/581 (13%)

Query: 143 HSIYHHFNTRT-SINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNET 201
           H +YHH      S+    H  +PN+     T +AL P   LA+Q  L+  +S   +    
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNA----STLVALLPL--LAQQGALAQGTSVHAY---- 253

Query: 202 NKFR-CLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD 260
            + R CL S ++  +      K+ +   +  +L+  Y + G    A + F    +R+   
Sbjct: 254 -RIRACLHSNRNSKS------KLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHAS 319
           WS+ +  +       Q  L ++  +  +G+ F S   +   L+ C  L    +G ++HA 
Sbjct: 307 WSALIGGFVLCSRMTQAFL-LFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 365

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           L K G   D+    +L++ Y K   ++ A  LF E++ ++D + ++ ++   ++N + E 
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA-VKDTVSYSALVSGYVQNGRAEE 424

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A  +F++MQ  + +  + T+V ++ AC+ + A   G+  HG V+   L S  S+CN LI 
Sbjct: 425 AFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALID 484

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY++  +++L+ +VF+ M   ++ SWN+MI+ Y   G    A +LF +MN+    PD +T
Sbjct: 485 MYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 544

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           + CLLS                           S   +V++      +++     HGY L
Sbjct: 545 FICLLSA-------------------------CSHSGLVIEGKHWFHVMR-----HGYGL 574

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAK 618
              +++  Y+   ++D+  +   L  A E   +M  R ++  W +L+ G C     ++  
Sbjct: 575 TPRMEH--YI--CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL-GACRVYKNIDLG 629

Query: 619 KMLNQMEEEEIKPDLVSWNSLVSG-YSIWGQSKEA--LVIIHHMKNSGIYPNVVTWTSLI 675
           K +++M  +E+ P+      L+S  YS  G+  EA  + II  ++     P   +W   I
Sbjct: 630 KKVSRM-IQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPG-CSWIE-I 686

Query: 676 SGSLQ------------NENYRESLKFFIQMQQEDIKPNST 704
           +GSL              E YRE     + +++   +P+++
Sbjct: 687 NGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTS 727


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/697 (33%), Positives = 369/697 (52%), Gaps = 75/697 (10%)

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            +G  +HGY++K    +  +VCN LIS Y+++N++E A  VFD M                
Sbjct: 2    DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMP--------------- 46

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                                Q DII+WN ++ G  ++G Y   + L   M   G   + +
Sbjct: 47   --------------------QRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDST 86

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            ++  V+ A  +      G   HGY +R GL  +  +G +L+DMY      ++  ++F NM
Sbjct: 87   TLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNM 146

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL-------------- 639
            + +N+V+W ++I+ Y   G F     +  +M  E I+PD+ +  S               
Sbjct: 147  EQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGK 206

Query: 640  -VSGYSI--------------------WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
             V GY+I                     G  +EA  I  H+       + ++W +LI G 
Sbjct: 207  SVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKK----DTISWNTLIGGY 262

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
             ++    E+   F +M  + ++PN+ TM+ +L     L  L+ G+E+H   ++ G+++D 
Sbjct: 263  SRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            +VA  L+DMY K G L  AR +F    NK L SW  MI G+ ++G G++AI LF ++  +
Sbjct: 322  FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            G QPDA +F+A+L AC +SGL +EGW++F++M  ++ I P ++HY+CMVDLL   G L E
Sbjct: 382  GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKE 441

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A++FI TMP +PD++IW +LL  CRIH +++ AE  +  +F+LEP N+  Y L+ N+ A 
Sbjct: 442  AYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAE 501

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
            + RWE V +L++ +   G++     SWI++    H+F AE   HP    I   L  +   
Sbjct: 502  AERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARR 561

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            M++ G+ P  +      D+    + L  H+ KLA+ +G++      PIRV KN+RVCS C
Sbjct: 562  MQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHC 621

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H AAK++S + GREI LRD  RFHHF EG CSC   W
Sbjct: 622  HEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 239/537 (44%), Gaps = 80/537 (14%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G+ VH  L+K GF     +  AL++FY K   +E A  +F E+    D + WN II    
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQ-RDIISWNSIIGGCA 61

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N  ++ A++LF  M     +  S T++ ++ AC +      G  +HGY +++ L S  S
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           + N L+ MYS  +      ++F +M+  N+ SW +MI+SYT  G+ D    LF +M    
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           I+PD+                                    +++  L A      LK+G+
Sbjct: 182 IRPDVF-----------------------------------AITSALDAFAGNESLKHGK 206

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             HGY +RNG++  L V  +LM+MYVK   ++ A+ +FD++  ++ ++WN+LI GY    
Sbjct: 207 SVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSN 266

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSW-----------------------------------N 637
           L   A  + N+M   +++P+ V+                                    N
Sbjct: 267 LANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVAN 325

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           +LV  Y   G    AL++   + +     N+++WT +I+G   +   R+++  F QM+  
Sbjct: 326 ALVDMYVKCG----ALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKS 756
            I+P++ + S++L  C   GL   G            I+        ++D+   +GNLK 
Sbjct: 382 GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKE 441

Query: 757 AREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           A E       +  +S W  ++ G  I+ N K A  +   + E   +P+   +  LLA
Sbjct: 442 AYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFE--LEPENTGYYVLLA 496



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 217/483 (44%), Gaps = 42/483 (8%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y +      A   F     R    W+S +    S  G   + +E++  +  +G  
Sbjct: 24  ALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS-NGLYDKAVELFVRMWLEGQE 82

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S  L  ++  C +    ++G  VH   ++ G   +  L  AL++ Y  C D  S NK+
Sbjct: 83  LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + ++ + W  +I    R   ++    LF+EM     +     I   L A A   +
Sbjct: 143 FRNM-EQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNES 201

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              GK +HGY +++ +E  L V N L+ MY +   +E A  +FD +   +  SWN++I  
Sbjct: 202 LKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGG 261

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y+     + A++LFN+M                              LL+       RPN
Sbjct: 262 YSRSNLANEAFTLFNEM------------------------------LLQ------LRPN 285

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             +++ +L A   L  L+ GRE H Y +R G   D +V  +L+DMYVK   L  A+ +FD
Sbjct: 286 AVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFD 345

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
            + N+N+++W  +I+GY   G   +A  +  QM+   I+PD  S+++++   S  G   E
Sbjct: 346 MLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDE 405

Query: 652 ALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
                + M+N   I P +  +  ++       N +E+ +F   M    I+P+S+   SLL
Sbjct: 406 GWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMP---IEPDSSIWVSLL 462

Query: 711 QTC 713
           + C
Sbjct: 463 RGC 465


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 264/798 (33%), Positives = 413/798 (51%), Gaps = 75/798 (9%)

Query: 312  LGVEVHASLIKRG--FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
            LG  +H  L+ RG   D D  +  +L+  Y +C  V SA  +F  +  L D + W  +  
Sbjct: 66   LGRALHRRLL-RGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMAS 124

Query: 370  VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE-----GKQIHGYVLK 424
               RN     ++ L  EM  S     + T+     AC      HE     G  + G V K
Sbjct: 125  CLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFP----HELYCLVGGVVLGLVHK 180

Query: 425  SAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
              L  ++++V + LI M +RN  L  A +VFD + +  +  W  +IS Y      + A  
Sbjct: 181  MGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            LF        +PD  T + ++S                                   A T
Sbjct: 241  LFLDFLEDGFEPDRYTMSSMIS-----------------------------------ACT 265

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN---AQEVFDNMKNRNIVA 600
            EL  ++ G + H   LR GL  D  V   L+DMY K++  Q    A +VF+ M   ++++
Sbjct: 266  ELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVIS 325

Query: 601  WNSLISGYCFKGLFVN-AKKMLNQMEEEEIKPDLVSWNSLV-SGYSIWGQSKEALVIIHH 658
            W +LISGY   G+  N    +  +M  E IKP+ ++++S++ S  SI        V  H 
Sbjct: 326  WTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHV 385

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP----------------- 701
            +K++    + V   +L+S   ++    E+ + F Q+ +  + P                 
Sbjct: 386  IKSNQASAHTVG-NALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRM 444

Query: 702  ----NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
                +S+T +SL+     +G+L  G+++H + LK GF  D +V+  L+ MYS+ G L+ A
Sbjct: 445  DVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
               F +  ++ + SW  MI G A +G  + A+ LFH+++ TG +P+ +T+ A+L+AC + 
Sbjct: 505  CRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHV 564

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLV EG +YF SM  D+ +IP +EHY+CMVDLL ++G + EA +FI  MP K DA +W  
Sbjct: 565  GLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKT 624

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+CR H ++E  EI ++ + +LEP + A Y L+ NL A +  W++V R+R +M +  +
Sbjct: 625  LLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNL 684

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
                  SW++++   H F A    HP   +IY +L  LV ++K +GYVPDT  V  D+ +
Sbjct: 685  NKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSD 744

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            E K + LL H+EK+A+ +GL+ T +  PIR+ KN RVC+DCH+A KYMS    REI LRD
Sbjct: 745  ELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRD 804

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFH  ++GECSC + W
Sbjct: 805  SNRFHRMKDGECSCGEYW 822



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 212/487 (43%), Gaps = 79/487 (16%)

Query: 190 CISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYL-EFGDFTSAAK 248
           C ++  CF +E         +   H    KMG +W +D  V S +   L   GD  SA K
Sbjct: 155 CAAAHACFPHELYCLVGGVVLGLVH----KMG-LWGTDVAVGSALIDMLARNGDLASARK 209

Query: 249 AFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLM 308
            F     ++   W+  +  Y   G   +E +E++ +    G       ++ ++  CT+L 
Sbjct: 210 VFDGLIEKTVVVWTLLISRYVQ-GECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELG 268

Query: 309 AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC---RDVESANKLFSEVSDLEDDLLWN 365
           +  LG+++H+  ++ G   D  + C L++ Y K    + ++ ANK+F  +    D + W 
Sbjct: 269 SVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPK-NDVISWT 327

Query: 366 EIIMVKLRNEKWENAI-KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            +I   +++   EN +  LF EM   S K    T   +L++CA +     G+Q+H +V+K
Sbjct: 328 ALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIK 387

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMK----------------DHNL------ 462
           S   S  +V N L+SMY+ +  +E A RVF+ +                 DH +      
Sbjct: 388 SNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVG 447

Query: 463 ---SSWNSMISS-----------------------------------YTGLGYVDVAWSL 484
              S++ S+IS+                                   Y+  GY++ A   
Sbjct: 448 ISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRS 507

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           FN++       ++I+W  ++SG   HG  +  L+L   M   G +PN  +   VL A + 
Sbjct: 508 FNELKDR----NVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSH 563

Query: 545 LRLLKYGRESHGYILRN-GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWN 602
           + L++ G+E    + R+ GL   +     ++D+  ++  ++ A E  + M  + + + W 
Sbjct: 564 VGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWK 623

Query: 603 SLISGYC 609
           +L+ G C
Sbjct: 624 TLL-GAC 629


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/718 (33%), Positives = 376/718 (52%), Gaps = 79/718 (11%)

Query: 396  SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
            +  +  ++Q  AK      GKQ+H  ++ +       + N L++MYS+  +L+ A ++FD
Sbjct: 5    TNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFD 64

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            +M   NL SW +MI                                   SG   +  +  
Sbjct: 65   TMPQRNLVSWTAMI-----------------------------------SGLSQNSKFSE 89

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
             +    GM+  G  P   + S  ++A   L  ++ G++ H   L+ G+  +L+VG++L D
Sbjct: 90   AIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLED 149

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI------ 629
            MY K   + +A +VF+ M  ++ V+W ++I GY   G F  A     +M +EE+      
Sbjct: 150  MYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 209

Query: 630  -----------------------------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
                                         + D+   N+L   YS  G  + A  +     
Sbjct: 210  LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF---- 265

Query: 661  NSGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
              GI     NVV++T LI G ++ E   + L  F++++++ I+PN  T SSL++ C    
Sbjct: 266  --GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             L+ G ++H   +K  F +D +V++ L+DMY K G L+ A + F +  + T  +WN ++ 
Sbjct: 324  ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVS 383

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
             F  +G GK+AI  F  +++ G +P+AITF +LL  C ++GLVEEG  YF SM   Y ++
Sbjct: 384  VFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 443

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P  EHYSC++DLLG+AG L EA +FI  MPF+P+A  W + LG+CRIHG  E  ++A+ +
Sbjct: 444  PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEK 503

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L KLEP NS    L+ N+ A   +WEDV  +R  M +  VK +  +SW+ +    HVF A
Sbjct: 504  LVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 563

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
            E   H     IY +L  L+ ++K  GYVP T  V  D+D+  K K+L  H+E++A+ + L
Sbjct: 564  EDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFAL 623

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +      PI V KN RVC DCH+A K++S V GR+I +RD +RFHHF +G CSC D W
Sbjct: 624  ISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 226/519 (43%), Gaps = 70/519 (13%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++HA LI  G+     L   L+N Y KC +++ A KLF  +    + + W  +I    
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ-RNLVSWTAMISGLS 82

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +N K+  AI+ F  M+              ++ACA +G+   GKQ+H   LK  + S L 
Sbjct: 83  QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V + L  MYS+   +  A +VF+ M   +  SW +MI  Y+ +G  + A   F KM    
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           +  D                 Q+VL                     L A   L+  K+GR
Sbjct: 203 VTID-----------------QHVLC------------------STLGACGALKACKFGR 227

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD-NMKNRNIVAWNSLISGYCFK 611
             H  +++ G + D++VG +L DMY K   +++A  VF  + + RN+V++  LI GY   
Sbjct: 228 SVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVET 287

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLV----------SGYSIWGQSKE---------A 652
                   +  ++  + I+P+  +++SL+           G  +  Q  +         +
Sbjct: 288 EQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 347

Query: 653 LVIIHHMKNSGIY------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
            +++      G+             P  + W SL+S   Q+   ++++KFF +M    +K
Sbjct: 348 SILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVK 407

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           PN+ T  SLL  C   GL++ G +  + +    G +      + +ID+  ++G LK A+E
Sbjct: 408 PNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKE 467

Query: 760 VFRKSANKTLASWNCMIMGFA-IYGNGKEAILLFHELLE 797
              +   +  A   C  +G   I+G+ +   L   +L++
Sbjct: 468 FINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK 506



 Score =  141 bits (355), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/496 (23%), Positives = 217/496 (43%), Gaps = 40/496 (8%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +   L+  Y + G+   A K F     R+   W++ +    S   +  E +  +  +   
Sbjct: 42  LTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL-SQNSKFSEAIRTFCGMRIC 100

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G +      +  ++ C  L +  +G ++H   +K G   ++ +   L + Y KC  +  A
Sbjct: 101 GEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDA 160

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            K+F E+   +D++ W  +I    +  ++E A+  F++M           +   L AC  
Sbjct: 161 CKVFEEMP-CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA 219

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A   G+ +H  V+K   ES++ V N L  MYS+   +E A+ VF       + S    
Sbjct: 220 LKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF------GIDSECRN 273

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           + SYT                            CL+ G+      +  L++   ++  G 
Sbjct: 274 VVSYT----------------------------CLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            PN  + S +++A      L+ G + H  +++   D D +V + L+DMY K   L++A +
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQ 365

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
            FD + +   +AWNSL+S +   GL  +A K   +M +  +KP+ +++ SL++G S  G 
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGL 425

Query: 649 SKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
            +E L   + M K  G+ P    ++ +I    +    +E+ +F  +M  E   PN+    
Sbjct: 426 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFE---PNAFGWC 482

Query: 708 SLLQTCGGLGLLQNGK 723
           S L  C   G  + GK
Sbjct: 483 SFLGACRIHGDKEMGK 498



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 2/201 (0%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           ++  ++ ++QT      L+ GK++H L +  G+    ++   L++MYSK G L  A ++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                + L SW  MI G +      EAI  F  +   G  P    F++ + AC + G +E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            G K    ++  + I   +   S + D+  K G + +A      MP K D   W A++  
Sbjct: 124 MG-KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDG 181

Query: 882 CRIHGHLEYAEIASRRLFKLE 902
               G  E A +A +++   E
Sbjct: 182 YSKIGEFEEALLAFKKMIDEE 202


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 262/769 (34%), Positives = 390/769 (50%), Gaps = 64/769 (8%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D+  +  L++ Y    +V+ A +LF+     + D + +N +I           A+ LF +
Sbjct: 70   DIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQ 129

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVLKSALESNLSVCNCLISMY---- 441
            M+         T   +L A + +       Q +H  V+K       SV N L+S Y    
Sbjct: 130  MKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCA 189

Query: 442  -----SRNNKLELATRVFDSMKDHNL--SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
                   +  +  A +VFD    + +   SW +MI+ Y     +  A  L + +      
Sbjct: 190  SSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLT----Y 245

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV----TELRLLKY 550
            P  + WN ++SG+   G Y+      R M S+G + +  + + ++ A      ++ +   
Sbjct: 246  PIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNC 305

Query: 551  GRESHGYILRNGLD----YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            GR+ HGYILR  ++    + L V  +L+  Y K D +  A+ VFD M  R          
Sbjct: 306  GRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR---------- 355

Query: 607  GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                                     D++SWN+++SGY    + +EA  I   M       
Sbjct: 356  -------------------------DIISWNAVLSGYVNAQRIEEANSIFSEMPER---- 386

Query: 667  NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            NV+TWT +ISG  QN    E LK F QM+ E ++P     +  +  C  LG L NG++IH
Sbjct: 387  NVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIH 446

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               ++ G          LI MYS+ G ++SA  VF         SWN MI   A +G+G 
Sbjct: 447  SQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGV 506

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            +AI LF ++++    PD ITF  +L AC ++GL++EG  YFD+M T Y I P  +HY+ +
Sbjct: 507  KAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARL 566

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            +DLL +AG   +A   I++MPF+  A IW ALL  CRIHG++E    A+ RL +L P   
Sbjct: 567  IDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQD 626

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
              Y ++ N+ A   +W++V R+R  M E GVK     SW++++ +VHVF  + A HP   
Sbjct: 627  GTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQ 686

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
             +Y  L  LV+EMKKLGYVPDT+ V  D++ E K   L +H+EKLA+VYG+MK    A I
Sbjct: 687  AVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATI 746

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RV KN R+C DCH A KY+S V  REI +RD  RFHHF+ GECSC + W
Sbjct: 747  RVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/528 (22%), Positives = 226/528 (42%), Gaps = 102/528 (19%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            + +H ++L S  + N  + N LI++Y +++ +  A ++FD +   ++ +  +++S+Y+ 
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY-QNVLTLLRGMQSLGFRPNGS 533
            G V +A  LFN   +     D +++N +++  ++HG+     L L   M+  GF P+  
Sbjct: 84  SGNVKLAQQLFNA--TPLTIRDTVSYNAMITA-YSHGNDGHAALNLFVQMKRYGFLPDPF 140

Query: 534 SVSVVLQAVTELR-LLKYGRESHGYILRNGLDYDLYVGTSLMDMYV---------KNDCL 583
           + S VL A++ +    ++ +  H  +++ G      V  +L+  YV          +  +
Sbjct: 141 TFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLM 200

Query: 584 QNAQEVFDNMKNRNIV--AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            +A++VFD      I   +W ++I+GY      V A+++L+ +      P  V+WN+++S
Sbjct: 201 ASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGL----TYPIDVAWNAMIS 256

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
           GY   G  +EA      M + GI  +  T+TSLIS                         
Sbjct: 257 GYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISA------------------------ 292

Query: 702 NSTTMSSLLQTCGG----LGLLQNGKEIHCLCLKNGFIKDAY----VATGLIDMYSKSGN 753
                      CG     +G+   G+++H   L+       +    V   LI  Y+K   
Sbjct: 293 -----------CGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDR 341

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           +  AR VF K   + + SWN ++ G+      +EA  +F E+ E     + +T+T +++ 
Sbjct: 342 MIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPER----NVLTWTVMISG 397

Query: 814 CKNSGLVEEGWKYFDSMST------DYNIIPTIEHYS----------------------- 844
              +G  EEG K F+ M +      DY     I   S                       
Sbjct: 398 LAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSG 457

Query: 845 -----CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
                 ++ +  + G ++ A     TMP+  D+  W A++ +   HGH
Sbjct: 458 LSAGNALITMYSRCGVVESAESVFLTMPYV-DSVSWNAMIAALAQHGH 504



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 181/407 (44%), Gaps = 29/407 (7%)

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            R  H +IL +G   + ++   L+++Y K+  +  A+++FD +   +IVA  +L+S Y  
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
            G    A+++ N      I+ D VS+N++++ YS       AL +   MK  G  P+  T
Sbjct: 84  SGNVKLAQQLFNATPLT-IR-DTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141

Query: 671 WTSLISG-SLQNENYRESLKF---FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN----- 721
           ++S++S  SL  +  R         I++    I   +  + S    C    L+++     
Sbjct: 142 FSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMA 201

Query: 722 -GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             +++     KN   + ++  T +I  Y ++ +L +ARE+          +WN MI G+ 
Sbjct: 202 SARKVFDETPKNQIYEPSW--TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYV 259

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACK---------NSGLVEEGWKYFDSMS 831
             G  +EA   F  +   G Q D  T+T+L++AC          N G    G+     + 
Sbjct: 260 RRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVE 319

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             ++ + ++   + ++    K   + EA      MP + D   W A+L     + + +  
Sbjct: 320 PSHHFVLSVN--NALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSG---YVNAQRI 373

Query: 892 EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
           E A+    ++   N   + +M++ LA +   E+  +L + M   G++
Sbjct: 374 EEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLE 420



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 86/407 (21%), Positives = 162/407 (39%), Gaps = 71/407 (17%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC----TKLMAFWLGVEV 316
           W++ +  Y    G  +E  + +  +H  G+       T ++  C     K+  F  G +V
Sbjct: 251 WNAMISGYVR-RGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQV 309

Query: 317 HA----SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           H     ++++    F + +  AL+ FY K   +  A ++F ++  + D + WN ++   +
Sbjct: 310 HGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMP-VRDIISWNAVLSGYV 368

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE---- 428
             ++ E A  +F EM       ++ T+  M+   A+ G   EG ++   +    LE    
Sbjct: 369 NAQRIEEANSIFSEM--PERNVLTWTV--MISGLAQNGFGEEGLKLFNQMKSEGLEPCDY 424

Query: 429 ---SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
                ++ C+ L S+   +N  ++ ++V     D  LS+ N++I+ Y+  G V+ A S+F
Sbjct: 425 AFAGAITACSVLGSL---DNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVF 481

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
             M       D ++WN +++    HG     + L   M      P+  +   +L A    
Sbjct: 482 LTMPYV----DSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHA 537

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA----- 600
            L+K GR                                     FD M  R  +      
Sbjct: 538 GLIKEGR-----------------------------------HYFDTMCTRYGITPGEDH 562

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
           +  LI   C  G+F+ A+ ++  M  E   P    W +L++G  I G
Sbjct: 563 YARLIDLLCRAGMFLKAQSVIKSMPFEAGAP---IWEALLAGCRIHG 606


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/792 (32%), Positives = 403/792 (50%), Gaps = 85/792 (10%)

Query: 289  GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            G++  +     +L  C+K+MAF  GV+VH  ++K G   D+ +  +L++FY  C  V+  
Sbjct: 117  GIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLG 176

Query: 349  NKLFSEVSDLEDDLL-WNEII----MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
             K+F E+  LE +++ W  +I    +V +  E    A+ LF EM     +    T+V  +
Sbjct: 177  RKVFDEM--LERNVVSWTSLINGYSVVNMAKE----AVCLFFEMVEVGVEPNPVTMVCAI 230

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
             ACAK+     GK++   + +  ++SN  V N L+ MY +   +     +FD   D NL 
Sbjct: 231  SACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNL- 289

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                                              + +N ++S +  HG    VL +L  M
Sbjct: 290  ----------------------------------VMYNTIMSNYVQHGLAGEVLVVLDEM 315

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
               G RP+  ++   + A  +L  L  G+ SH Y+ RNGL+    +  +++DMY+K    
Sbjct: 316  LQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKR 375

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            + A +VFD+M N+ +V                                   +WNSL++G 
Sbjct: 376  EAACKVFDSMSNKTVV-----------------------------------TWNSLIAGL 400

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
               G+ + AL I   M  S    N+V+W ++I   +Q   + E++    +MQ + IK + 
Sbjct: 401  VRDGELELALRIFGEMPES----NLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDR 456

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             TM  +   CG LG L   K I+    KN    D  + T L+DM+S+ G+  +A  VF  
Sbjct: 457  VTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFEN 516

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               + +++W   I   A+ GN K AI LF E+L+   + D   F ALL A  + G V++G
Sbjct: 517  MEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQG 576

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             + F +M   + + P I HY CMVDLLG+AG L+EA+D +++MP KP+  IWG+ L +CR
Sbjct: 577  RQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACR 636

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
             H ++E+A  A  ++ +L P     + L+ N+ A + +W DV R+R  M E G + V   
Sbjct: 637  KHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGS 696

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I++  ++  F++    H    +I   L  +   + ++GYVPDT  V  D+DE+EK  +
Sbjct: 697  SSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHL 756

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLA+ YGL+ T    PIRV+KN R+CSDCH+ AK +S + GREI +RD  R+H 
Sbjct: 757  LSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHF 816

Query: 1064 FREGECSCNDCW 1075
            F+EG CSC D W
Sbjct: 817  FKEGFCSCRDFW 828



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 246/518 (47%), Gaps = 11/518 (2%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L+  +K    S     H  ++KMG + +   +  SLI  Y   G      K F     R
Sbjct: 128 LLSACSKIMAFSEGVQVHGVVVKMGLVKDLF-VANSLIHFYAACGKVDLGRKVFDEMLER 186

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +   W+S +  Y S     +E + ++ E+   GV      +   +  C KL    LG +V
Sbjct: 187 NVVSWTSLINGY-SVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKV 245

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
              + + G   +  +  AL++ Y KC D+ +  ++F E SD ++ +++N I+   +++  
Sbjct: 246 CNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSD-KNLVMYNTIMSNYVQHGL 304

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
               + +  EM     +    T++  + ACA++G    GK  H YV ++ LE   ++ N 
Sbjct: 305 AGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNA 364

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           +I MY +  K E A +VFDSM +  + +WNS+I+     G +++A  +F +M  S    +
Sbjct: 365 IIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPES----N 420

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
           +++WN ++        ++  + LLR MQ+ G + +  ++  +  A   L  L   +  + 
Sbjct: 421 LVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYT 480

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
           YI +N +  D+ +GT+L+DM+ +     NA  VF+NM+ R++ AW + I     +G    
Sbjct: 481 YIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKG 540

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLI 675
           A ++ ++M ++++K D   + +L++ +S  G   +   +   M K  G+ P +V +  ++
Sbjct: 541 AIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMV 600

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               +     E+   F  M+   IKPN     S L  C
Sbjct: 601 DLLGRAGLLEEA---FDLMKSMPIKPNDVIWGSFLAAC 635



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 42/283 (14%)

Query: 579 KNDCLQNAQEVFD------NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE-IKP 631
           KN  LQ  + + +      NM  + +   N LI+     G   +    LN  +E+E  K 
Sbjct: 25  KNSSLQTCKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKC 84

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
            L + N+L+ GY+  G  KEA+ I  HM              ++ G              
Sbjct: 85  SLYTCNTLIRGYAASGLCKEAIFIYLHM-------------IIVMG-------------- 117

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
                  I P++ T   LL  C  +     G ++H + +K G +KD +VA  LI  Y+  
Sbjct: 118 -------IVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAAC 170

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G +   R+VF +   + + SW  +I G+++    KEA+ LF E++E G +P+ +T    +
Sbjct: 171 GKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAI 230

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
           +AC     +E G K  + M T+  +       + ++D+  K G
Sbjct: 231 SACAKLKDLELGKKVCNLM-TELGVKSNTLVVNALLDMYMKCG 272


>gi|224127902|ref|XP_002320192.1| predicted protein [Populus trichocarpa]
 gi|222860965|gb|EEE98507.1| predicted protein [Populus trichocarpa]
          Length = 398

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/388 (56%), Positives = 291/388 (75%), Gaps = 10/388 (2%)

Query: 160 HSHKPNSI-TNSPTSLALPPTDTL-----AKQAQLSCISSGFCFLNETNKFRCLSSVKSK 213
            +HKP  I T+SP SL++  T T       +   +  + S   F  ++N    L SVK+ 
Sbjct: 15  QNHKPKPIRTHSPPSLSVALTTTSSLETTPRPTHVPNLGSLNGFTADSN---TLDSVKAM 71

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HAQMIK G  WNSD M K LI  YLE GD  SAA  FF+ F+R+Y  W++FLE+++SFGG
Sbjct: 72  HAQMIKKGNKWNSDSMAKHLITSYLELGDCKSAAVVFFVGFARNYVMWNNFLEEFKSFGG 131

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           +  E+LEV+ ELH +GV+F SR+++++LK+C  +M  WLG+EVHASLIKRGF+ DV+++C
Sbjct: 132 DPSEVLEVFKELHCEGVVFDSRVISVVLKICAGVMNLWLGLEVHASLIKRGFELDVYVRC 191

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           ALMNFYG+C  VESAN++F E  +L DDLLWNE I+V L+NE++  A++LFREMQF ++K
Sbjct: 192 ALMNFYGRCWCVESANQVFHEPRNL-DDLLWNEAILVNLKNERFVKALELFREMQFLTSK 250

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             + T++K+LQAC+K GA +EGKQIHGYVLK A+ESNLS+CN LI MYSRN K++LA+RV
Sbjct: 251 VNATTVLKILQACSKKGALNEGKQIHGYVLKLAMESNLSICNSLIIMYSRNGKIKLASRV 310

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           FDSMKDH+LSSWNS+ISSY+ LGY++ AW+LF KM  S  +PDIITWN +LSG+    SY
Sbjct: 311 FDSMKDHSLSSWNSIISSYSTLGYLNDAWNLFCKMERSGTKPDIITWNSILSGNAIVSSY 370

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
           + VL +LR MQ+ GFRPN  S++ VLQA
Sbjct: 371 KEVLIILRRMQAAGFRPNPRSITSVLQA 398



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 176/364 (48%), Gaps = 38/364 (10%)

Query: 316 VHASLIKRGFDFDVH-LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM-VKLR 373
           +HA +IK+G  ++   +   L+  Y +  D +SA  +F  V    + ++WN  +   K  
Sbjct: 71  MHAQMIKKGNKWNSDSMAKHLITSYLELGDCKSAAVVFF-VGFARNYVMWNNFLEEFKSF 129

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                  +++F+E+        SR I  +L+ CA V     G ++H  ++K   E ++ V
Sbjct: 130 GGDPSEVLEVFKELHCEGVVFDSRVISVVLKICAGVMNLWLGLEVHASLIKRGFELDVYV 189

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              L++ Y R   +E A +VF   ++ +   WN  I              L N  N   +
Sbjct: 190 RCALMNFYGRCWCVESANQVFHEPRNLDDLLWNEAI--------------LVNLKNERFV 235

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           +                      L L R MQ L  + N ++V  +LQA ++   L  G++
Sbjct: 236 K---------------------ALELFREMQFLTSKVNATTVLKILQACSKKGALNEGKQ 274

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HGY+L+  ++ +L +  SL+ MY +N  ++ A  VFD+MK+ ++ +WNS+IS Y   G 
Sbjct: 275 IHGYVLKLAMESNLSICNSLIIMYSRNGKIKLASRVFDSMKDHSLSSWNSIISSYSTLGY 334

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
             +A  +  +ME    KPD+++WNS++SG +I    KE L+I+  M+ +G  PN  + TS
Sbjct: 335 LNDAWNLFCKMERSGTKPDIITWNSILSGNAIVSSYKEVLIILRRMQAAGFRPNPRSITS 394

Query: 674 LISG 677
           ++  
Sbjct: 395 VLQA 398



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 80/143 (55%)

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           W   I  +L+NE + ++L+ F +MQ    K N+TT+  +LQ C   G L  GK+IH   L
Sbjct: 221 WNEAILVNLKNERFVKALELFREMQFLTSKVNATTVLKILQACSKKGALNEGKQIHGYVL 280

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
           K     +  +   LI MYS++G +K A  VF    + +L+SWN +I  ++  G   +A  
Sbjct: 281 KLAMESNLSICNSLIIMYSRNGKIKLASRVFDSMKDHSLSSWNSIISSYSTLGYLNDAWN 340

Query: 791 LFHELLETGFQPDAITFTALLAA 813
           LF ++  +G +PD IT+ ++L+ 
Sbjct: 341 LFCKMERSGTKPDIITWNSILSG 363



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 128/325 (39%), Gaps = 78/325 (24%)

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG-SY 513
           DSM  H       +I+SY  LG    A  +F          + + WN  L    + G   
Sbjct: 85  DSMAKH-------LITSYLELGDCKSAAVVF----FVGFARNYVMWNNFLEEFKSFGGDP 133

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
             VL + + +   G   +   +SVVL+    +  L  G E H  +++ G + D+YV  +L
Sbjct: 134 SEVLEVFKELHCEGVVFDSRVISVVLKICAGVMNLWLGLEVHASLIKRGFELDVYVRCAL 193

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME-------- 625
           M+ Y +  C+++A +VF   +N + + WN  I        FV A ++  +M+        
Sbjct: 194 MNFYGRCWCVESANQVFHEPRNLDDLLWNEAILVNLKNERFVKALELFREMQFLTSKVNA 253

Query: 626 ---------------------------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
                                      +  ++ +L   NSL+  YS  G+ K A  +   
Sbjct: 254 TTVLKILQACSKKGALNEGKQIHGYVLKLAMESNLSICNSLIIMYSRNGKIKLASRVFDS 313

Query: 659 MKN-------------------------------SGIYPNVVTWTSLISGSLQNENYRES 687
           MK+                               SG  P+++TW S++SG+    +Y+E 
Sbjct: 314 MKDHSLSSWNSIISSYSTLGYLNDAWNLFCKMERSGTKPDIITWNSILSGNAIVSSYKEV 373

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQT 712
           L    +MQ    +PN  +++S+LQ 
Sbjct: 374 LIILRRMQAAGFRPNPRSITSVLQA 398



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 119/308 (38%), Gaps = 54/308 (17%)

Query: 636 WNS------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ-NENYRESL 688
           WNS      L++ Y   G  K A V+       G   N V W + +        +  E L
Sbjct: 82  WNSDSMAKHLITSYLELGDCKSAAVVFF----VGFARNYVMWNNFLEEFKSFGGDPSEVL 137

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
           + F ++  E +  +S  +S +L+ C G+  L  G E+H   +K GF  D YV   L++ Y
Sbjct: 138 EVFKELHCEGVVFDSRVISVVLKICAGVMNLWLGLEVHASLIKRGFELDVYVRCALMNFY 197

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
            +   ++SA +VF +  N     WN  I+         +A+ LF E+     + +A T  
Sbjct: 198 GRCWCVESANQVFHEPRNLDDLLWNEAILVNLKNERFVKALELFREMQFLTSKVNATTVL 257

Query: 809 ALLAACKNSGLVEEG-----------------------------------WKYFDSMSTD 833
            +L AC   G + EG                                    + FDSM   
Sbjct: 258 KILQACSKKGALNEGKQIHGYVLKLAMESNLSICNSLIIMYSRNGKIKLASRVFDSMKDH 317

Query: 834 YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGALLGSCRIHGHLEY 890
                ++  ++ ++      GYL++AW+    M     KPD   W ++L    I    + 
Sbjct: 318 -----SLSSWNSIISSYSTLGYLNDAWNLFCKMERSGTKPDIITWNSILSGNAIVSSYKE 372

Query: 891 AEIASRRL 898
             I  RR+
Sbjct: 373 VLIILRRM 380


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
            mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/637 (36%), Positives = 362/637 (56%), Gaps = 51/637 (8%)

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +LFNK      + ++ +WN +++     G     L     M+ L  +PN S+    +++ 
Sbjct: 106  TLFNKYVD---KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 162

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            + L  L  GR++H   L  G + DL+V ++L+DMY K   L++A+ +FD + +RNIV+W 
Sbjct: 163  SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 222

Query: 603  SLISGYC-----------FKGLFVNAK-------------------KMLNQMEEEEI--- 629
            S+I+GY            FK   V                         +++ E+ I   
Sbjct: 223  SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282

Query: 630  ----------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                      + DL   N+L+  Y+  G+   +  +   M       +V++W S+I+   
Sbjct: 283  VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAER----DVISWNSIIAVYA 338

Query: 680  QNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            QN    ES++ F +M ++ +I  N+ T+S++L  C   G  + GK IH   +K G   + 
Sbjct: 339  QNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 398

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            +V T +IDMY K G ++ AR+ F +   K + SW+ M+ G+ ++G+ KEA+ +F+E+   
Sbjct: 399  FVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA 458

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            G +P+ ITF ++LAAC ++GL+EEGW +F +MS ++++ P +EHY CMVDLLG+AGYL E
Sbjct: 459  GVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKE 518

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A+D I+ M  +PD  +WGALLG+CR+H +++  EI++R+LF+L+P N   Y L+ N+ A 
Sbjct: 519  AFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYAD 578

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
            + RWEDVER+R  M   G+     +S + I   VHVF      HP   +IY  L  L  +
Sbjct: 579  AGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMK 638

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            ++++GYVPD   V  D+  EEK  VL  H+EKLA+ +G+M T     I +IKN RVC DC
Sbjct: 639  LQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDC 698

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            HTA K++S +  REI +RD  RFHHFR+G CSC D W
Sbjct: 699  HTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 158/321 (49%), Gaps = 14/321 (4%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYF 254
           C +   +    L S +  H Q +  G  +  D  V S L+  Y + G+   A   F    
Sbjct: 157 CAIKSCSALLDLHSGRQAHQQALIFG--FEPDLFVSSALVDMYSKCGELRDARTLFDEIS 214

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGEL-------HGKGVIFRSRILTI-ILKLCTK 306
            R+   W+S +  Y     +    L ++ E         G G +    I  + +L  C++
Sbjct: 215 HRNIVSWTSMITGYVQ-NDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSR 273

Query: 307 LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNE 366
           +    +   VH  LIKRGF+ D+ ++  LM+ Y KC ++  + ++F  +++  D + WN 
Sbjct: 274 VSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAE-RDVISWNS 332

Query: 367 IIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
           II V  +N     ++++F  M +       + T+  +L ACA  G+   GK IH  V+K 
Sbjct: 333 IIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM 392

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
            LESN+ V   +I MY +  K+E+A + FD M++ N+ SW++M++ Y   G+   A  +F
Sbjct: 393 GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVF 452

Query: 486 NKMNSSRIQPDIITWNCLLSG 506
            +MN + ++P+ IT+  +L+ 
Sbjct: 453 YEMNMAGVKPNYITFVSVLAA 473



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/404 (23%), Positives = 174/404 (43%), Gaps = 59/404 (14%)

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LF++  D  +   WN +I    R+     A++ F  M+  S K    T    +++C+ + 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
             H G+Q H   L    E +L V + L+ MYS+  +L  A  +FD +   N+ SW SMI+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y        A  LF +               L+    + G  +  +  +          
Sbjct: 227 GYVQNDDAHRALLLFKEF--------------LVEESGSEGDGEVCVDPI---------- 262

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
              ++  VL A + +         HG++++ G + DL V  +LMD Y K   L  ++ VF
Sbjct: 263 ---AMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVF 319

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQS 649
           D M  R++++WNS+I+ Y   G+   + ++ ++M ++ EI  + V+ ++++   +  G  
Sbjct: 320 DGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQ 379

Query: 650 KEALVIIHHMKNSGIYPNVV-------------------------------TWTSLISGS 678
           +    I   +   G+  NV                                +W+++++G 
Sbjct: 380 RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY 439

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
             + + +E+L+ F +M    +KPN  T  S+L  C   GLL+ G
Sbjct: 440 GMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 483



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 15/252 (5%)

Query: 214 HAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  +IK G  +  D  V+ +L+  Y + G+   + + F     R    W+S +  Y    
Sbjct: 284 HGFLIKRG--FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQ-N 340

Query: 273 GEVQELLEVWGELHGKGVI-FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G   E +E++  +   G I + +  L+ +L  C    +  LG  +H  +IK G + +V +
Sbjct: 341 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 400

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             ++++ Y KC  VE A K F  + + ++   W+ ++     +   + A+++F EM  + 
Sbjct: 401 GTSIIDMYCKCGKVEMARKAFDRMRE-KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG 459

Query: 392 AKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
            K    T V +L AC+  G   EG        H + ++  +E       C++ +  R   
Sbjct: 460 VKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY----GCMVDLLGRAGY 515

Query: 447 LELATRVFDSMK 458
           L+ A  +   MK
Sbjct: 516 LKEAFDLIKGMK 527


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 269/883 (30%), Positives = 425/883 (48%), Gaps = 95/883 (10%)

Query: 226  SDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
            SD  V + I H Y  +G  + + K F     R+   W+S +  Y S  GE +E+++++ +
Sbjct: 207  SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY-SDKGEPEEVIDIYKD 265

Query: 285  LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
                                       LG ++   ++K G +  + ++ +L++  G   +
Sbjct: 266  ES-------------------------LGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 300

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            V+ AN +F ++S+  D + WN I     +N   E + ++F  M+    +  S T+  +L 
Sbjct: 301  VDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 359

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
                V     G+ IHG V+K   +S + VCN L+ MY+   +   A  VF  M       
Sbjct: 360  VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP------ 413

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                                           D+I+WN L++     G   + L LL  M 
Sbjct: 414  -----------------------------TKDLISWNSLMASFVNDGRSLDALGLLCSMI 444

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            S G   N  + +  L A       + GR  HG ++ +GL Y+  +G +L+ MY K   + 
Sbjct: 445  SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 504

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
             ++ V   M  R++VAWN+LI GY        A      M  E +  + ++  S++S   
Sbjct: 505  ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 564

Query: 645  IWGQSKEALVIIH------------HMKNSGIY--------------------PNVVTWT 672
            + G   E    +H            H+KNS I                      N++TW 
Sbjct: 565  LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 624

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            ++++ +  + +  E LK   +M+   +  +  + S  L     L +L+ G+++H L +K 
Sbjct: 625  AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 684

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF  D+++     DMYSK G +    ++   S N++L SWN +I     +G  +E    F
Sbjct: 685  GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 744

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            HE+LE G +P  +TF +LL AC + GLV++G  Y+D ++ D+ + P IEH  C++DLLG+
Sbjct: 745  HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 804

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            +G L EA  FI  MP KP+  +W +LL SC+IHG+L+    A+  L KLEP + + Y L 
Sbjct: 805  SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 864

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + RWEDVE +R  M    +K     SW+++   V  F      HP T EIY +L
Sbjct: 865  SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 924

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              +   +K+ GYV DT    QD DEE+K   L +H+E+LA+ Y LM T   + +R+ KN 
Sbjct: 925  EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 984

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+CSDCH+  K++S V GR I LRD  RFHHF  G CSC D W
Sbjct: 985  RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 181/734 (24%), Positives = 321/734 (43%), Gaps = 132/734 (17%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  VHA  +K      V     L+N Y K   V+ A  LF ++  + +++ WN ++   +
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLF-DIMPVRNEVSWNTMMSGIV 149

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESNL 431
           R   +   ++ FR+M     K  S  I  ++ AC + G+ F EG Q+HG+V KS L S++
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW-------------------------- 465
            V   ++ +Y     +  + +VF+ M D N+ SW                          
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLG 269

Query: 466 -------------------NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
                              NS+IS    +G VD A  +F++M+    + D I+WN + + 
Sbjct: 270 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS----ERDTISWNSIAAA 325

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
           +  +G  +    +   M+      N ++VS +L  +  +   K+GR  HG +++ G D  
Sbjct: 326 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 385

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM-- 624
           + V  +L+ MY        A  VF  M  +++++WNSL++ +   G  ++A  +L  M  
Sbjct: 386 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 445

Query: 625 -----------------------EEEEIKPDLVS----------WNSLVSGYSIWGQSKE 651
                                  E+  I   LV            N+LVS Y   G+  E
Sbjct: 446 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 505

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           +  ++  M       +VV W +LI G  ++E+  ++L  F  M+ E +  N  T+ S+L 
Sbjct: 506 SRRVLLQMPRR----DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 561

Query: 712 TCGGLG-LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
            C   G LL+ GK +H   +  GF  D +V   LI MY+K G+L S++++F    N+ + 
Sbjct: 562 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 621

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY---- 826
           +WN M+   A +G+G+E + L  ++   G   D  +F+  L+A     ++EEG +     
Sbjct: 622 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 681

Query: 827 -----------FDSMSTDYN----------IIP-----TIEHYSCMVDLLGKAGYLDE-- 858
                      F++ +  Y+          ++P     ++  ++ ++  LG+ GY +E  
Sbjct: 682 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 741

Query: 859 -AWDFIRTMPFKPDATIWGALLGSCRIHG-----HLEYAEIASRRLFKLEPCNSANYNLM 912
             +  +  M  KP    + +LL +C  HG      L Y ++ +R  F LEP    +   +
Sbjct: 742 ATFHEMLEMGIKPGHVTFVSLLTACS-HGGLVDKGLAYYDMIARD-FGLEPAIE-HCICV 798

Query: 913 MNLLAMSNRWEDVE 926
           ++LL  S R  + E
Sbjct: 799 IDLLGRSGRLAEAE 812



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 15/324 (4%)

Query: 211 KSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  HA ++  G  + SD+ VK SLI  Y + GD +S+   F    +R+   W++ L    
Sbjct: 574 KPLHAYIVSAG--FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA-AN 630

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           +  G  +E+L++  ++   GV       +  L    KL     G ++H   +K GF+ D 
Sbjct: 631 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 690

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  A  + Y KC ++    K+     +      WN +I    R+  +E     F EM  
Sbjct: 691 FIFNAAADMYSKCGEIGEVVKMLPPSVN-RSLPSWNILISALGRHGYFEEVCATFHEMLE 749

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLE 448
              K    T V +L AC+  G   +G   +  + +   LE  +  C C+I +  R+ +L 
Sbjct: 750 MGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLA 809

Query: 449 LATRVFDS--MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            A        MK ++L  W S+++S    G +D         N S+++P+  +   L S 
Sbjct: 810 EAETFISKMPMKPNDL-VWRSLLASCKIHGNLDRGRKAAE--NLSKLEPEDDSVYVLSSN 866

Query: 507 HF-THGSYQNVLTLLRGMQSLGFR 529
            F T G +++V  + + M   GF+
Sbjct: 867 MFATTGRWEDVENVRKQM---GFK 887


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
            mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/696 (34%), Positives = 379/696 (54%), Gaps = 67/696 (9%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N  I+ Y+R  ++E A RVFD M D  + SWNSM++ Y        A  LF+KM     +
Sbjct: 20   NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMP----E 75

Query: 495  PDIITWNCLLSGH------------FTHGSYQNVLT---LLRGMQSLGF----------- 528
             + ++WN L+SG+            F     +NV++   ++RG    G            
Sbjct: 76   RNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM 135

Query: 529  -RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
               N  S +V+L  + ++R +   R     +       D+   T+++  Y +   L  A+
Sbjct: 136  PEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVK----DVVARTNMISGYCQEGRLAEAR 191

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            E+FD M  RN+++W ++ISGY   G    A+K+   M E+    + VSW +++ GY+  G
Sbjct: 192  ELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGG 247

Query: 648  QSKEALVIIHHM----------------------KNSGIYPNVV-----TWTSLISGSLQ 680
            + +EA  +   M                      K   ++  +      TW+++I    +
Sbjct: 248  RIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYER 307

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
                 E+L  F  MQ+E ++ N  ++ S+L  C  L  L +G+++H   +K+ F  D +V
Sbjct: 308  KGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFV 367

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            A+ LI MY K G+L  AR++F + + K +  WN +I G+A +G  +EA+ +FHE+  +G 
Sbjct: 368  ASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGM 427

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
              D +TF  +L+AC  +G V+EG + F+SM + Y + P  EHY+CMVDLLG+AG +++A 
Sbjct: 428  ATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAM 487

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            D I+ MP + DA IWGALLG+CR H ++  AE+A+++L +LEP N+  Y L+ N+ A   
Sbjct: 488  DLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKG 547

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE-GAPHPATGEIYFELYHLVSEM 979
            RW DV  LR +M    V      SWI++++ VH+F+      HP    I   L  L   +
Sbjct: 548  RWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGML 607

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
            ++ GY PD+  V  D+DEEEK + L  H+E+LA+ +GL+K     PIRV+KN RVC DCH
Sbjct: 608  REAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCH 667

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +A K ++ + GREI LRD  RFHHF++G CSC D W
Sbjct: 668  SAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 159/344 (46%), Gaps = 36/344 (10%)

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           V  A  LF ++ + ++ + W  ++   ++  + + A  LF  M       ++RT   M+ 
Sbjct: 125 VSEAETLFWQMPE-KNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDV--VART--NMIS 179

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
              + G   E +++   + +     N+     +IS Y +N ++++A ++F+ M + N  S
Sbjct: 180 GYCQEGRLAEARELFDEMPRR----NVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVS 235

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRI---------------------------QPDI 497
           W +M+  YT  G ++ A  LF+ M    +                           + D 
Sbjct: 236 WTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDD 295

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            TW+ ++  +   G     L L   MQ  G + N  S+  VL     L  L +GR+ H  
Sbjct: 296 GTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAE 355

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           ++++  D D++V + L+ MYVK   L  A+++FD    ++IV WNS+I+GY   GL   A
Sbjct: 356 LVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEA 415

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            ++ ++M    +  D V++  ++S  S  G+ KE L I   MK+
Sbjct: 416 LQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKS 459



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 135/294 (45%), Gaps = 41/294 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y++ G    A K F +   ++   W++ L  Y   GG ++E  E++  +  K V+
Sbjct: 207 TMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQ-GGRIEEASELFDAMPVKAVV 265

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                       C  ++   LG                         +G+  +V  A ++
Sbjct: 266 -----------ACNAMI---LG-------------------------FGQNGEVAKARQV 286

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F ++ + +DD  W+ +I V  R      A+ LF  MQ    ++   +++ +L  CA + +
Sbjct: 287 FDQIRE-KDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLAS 345

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+Q+H  ++KS  +S++ V + LI+MY +   L  A ++FD     ++  WNS+I+ 
Sbjct: 346 LDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITG 405

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           Y   G V+ A  +F++M SS +  D +T+  +LS     G  +  L +   M+S
Sbjct: 406 YAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKS 459


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/630 (35%), Positives = 352/630 (55%), Gaps = 32/630 (5%)

Query: 478  VDVAWSLFNKMNSSRI-QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
            +D   + ++K+  S++ +P+I  WN ++ G  +   + + + L   M+  GF PN  ++ 
Sbjct: 59   LDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIP 118

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             VL+A      ++ G + H  +++ G D+D++V TSL+ +YVK D   +A +VFD++ ++
Sbjct: 119  FVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK 178

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
            N+V+W ++I+GY   G F  A     ++ E  +KPD  S   +++  +  G       I 
Sbjct: 179  NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID 238

Query: 657  HHMKNSGIYPNV-------------------------------VTWTSLISGSLQNENYR 685
             ++ +SG+  NV                               V+W+++I G   N   +
Sbjct: 239  RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQ 298

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            ++L  F QMQ E++KP+  TM  +L  C  LG L  G     L  +N F+ +  + T LI
Sbjct: 299  QALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALI 358

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            DMYSK G++  A E+F     K    WN M++G ++ G+ K    LF  + + G +PD  
Sbjct: 359  DMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF  LL  C + G V EG ++F++M   +++ P+IEHY CMVDLLG+AG L+EA   I  
Sbjct: 419  TFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINN 478

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP KP+A +WGALLG C++H     AE   ++L +LEP NS NY  + N+ + ++RWE+ 
Sbjct: 479  MPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEA 538

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
            E++R +M E  ++ +   SWI+ID IVH F      H  + +IY +L  L  E+K +G+V
Sbjct: 539  EKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHV 598

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            P T  V  DI+EEEK   L  H+EKLA+ +GL+ +     IRV+KN RVC DCH A K +
Sbjct: 599  PTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLI 658

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S +  REI +RD  RFH F +G CSC D W
Sbjct: 659  SKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 249/549 (45%), Gaps = 62/549 (11%)

Query: 172 TSLALPPTDTLAKQAQL-SCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV 230
           T L  P +   +K  ++ + +S+G  F N+         +K  HA+++++    + D+ +
Sbjct: 2   TILTNPSSPVFSKALEIKNYLSNGLNFFNQ---------LKHIHARLLRLH--LDQDNYL 50

Query: 231 KSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
            +LI    L+FG    +   F      +   W++ +    S      + + ++G + G G
Sbjct: 51  LNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVS-KDCFDDAIHLYGSMRGGG 109

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
            +  +  +  +LK C + +   LG+++H+ L+K G+D DV +K +L++ Y KC + + A 
Sbjct: 110 FLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDAL 169

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           K+F ++ D ++ + W  II   + +  +  AI  F+++     K  S ++VK+L ACA++
Sbjct: 170 KVFDDIPD-KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL 228

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G    G+ I  Y+  S +  N+ V   L+ MY +   LE A  +F +M + ++ SW++MI
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
             Y   G    A  LF +M S  ++PD  T                              
Sbjct: 289 QGYAFNGLPQQALDLFFQMQSENLKPDCYT------------------------------ 318

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                +  VL A   L  L  G  +   + RN    +  +GT+L+DMY K   +  A E+
Sbjct: 319 -----MVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEI 373

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F  MK ++ V WN+++ G    G       + + +E+  I+PD  ++  L+ G +  G  
Sbjct: 374 FTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFV 433

Query: 650 KEALVIIHHMKNS-GIYPNVVTWTSLIS----GSLQNENYRESLKFFIQMQQEDIKPNST 704
            E     ++MK    + P++  +  ++       L NE ++        +    +KPN+ 
Sbjct: 434 NEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQ-------LINNMPMKPNAV 486

Query: 705 TMSSLLQTC 713
              +LL  C
Sbjct: 487 VWGALLGGC 495



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 12/208 (5%)

Query: 701 PNSTTMSSLLQT----CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           P+S   S  L+       GL      K IH   L+    +D Y+   ++      G+   
Sbjct: 7   PSSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNY 66

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           ++ VF +     +  WN MI G        +AI L+  +   GF P+  T   +L AC  
Sbjct: 67  SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR 126

Query: 817 SGLVEEGWKYFDSM---STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
              V  G K    +     D+++       + ++ L  K    D+A      +P K +  
Sbjct: 127 KLDVRLGLKIHSLLVKAGYDHDVFVK----TSLLSLYVKCDNFDDALKVFDDIPDK-NVV 181

Query: 874 IWGALLGSCRIHGHLEYAEIASRRLFKL 901
            W A++      GH   A  A ++L ++
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEM 209


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 257/847 (30%), Positives = 430/847 (50%), Gaps = 110/847 (12%)

Query: 300  ILKLCTK-----LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF-- 352
            I+K CT+     L A    + V AS+IK GF+ + +    L+  + +  D+  A KLF  
Sbjct: 67   IIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDE 126

Query: 353  ----------------------SEVSDLEDDLL------WNEIIMVKLRNEKWENAIKLF 384
                                  SE   L D +       W  +I    +N ++  A  LF
Sbjct: 127  MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186

Query: 385  REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
             EM          ++  +L    +  + +E +Q+H +V+K   +S L V N L+  Y + 
Sbjct: 187  IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT 246

Query: 445  NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
              L L                               A+ LFN +     + D +T+N LL
Sbjct: 247  RSLGL-------------------------------AFQLFNDIP----ERDSVTFNALL 271

Query: 505  SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
            +G+   G  +  + L   MQ +G+RP   + + +L A  +L  +++G++ HG++++    
Sbjct: 272  TGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFV 331

Query: 565  YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG------------ 612
            ++++V  +L+D Y K+D +  A ++F  M   + +++N L++ Y + G            
Sbjct: 332  WNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKEL 391

Query: 613  --------------LFVNAKKMLN-----QMEEEEIKPDLVS----WNSLVSGYSIWGQS 649
                          L   A   LN     Q+  + I  D +S     NSLV  Y+  G+ 
Sbjct: 392  QFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEF 451

Query: 650  KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
             EA  I   +      P    WT++IS  +Q   + + LK F++MQ+  I  ++ T +S+
Sbjct: 452  GEANRIFSDLAIQSSVP----WTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507

Query: 710  LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            ++ C  L  L  GK++H   + +G+I + +  + L+DMY+K G++K A ++F++   +  
Sbjct: 508  VRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNS 567

Query: 770  ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS 829
             SWN +I  +A  G+G   + LF E++ +G QPD+++  ++L AC + GLVEEG +YFDS
Sbjct: 568  VSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDS 627

Query: 830  MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLE 889
            M+  Y ++P  EHY+  +D+L + G  DEA   +  MPF+PD  +W ++L SC IH + E
Sbjct: 628  MTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQE 687

Query: 890  YAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
             A+ A+ +LF ++   ++A Y  M N+ A +  W++V +++ +M E GVK V  +SW++I
Sbjct: 688  LAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEI 747

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
                HVF+A    HP   EI  +L  L  +M K GY PD+ C   ++DEE K + L  H+
Sbjct: 748  KHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHS 807

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            E++AI + L+ T   +PI V+KN R C+DCH A K +S +  REI +RD +RFHHFR+G 
Sbjct: 808  ERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGF 867

Query: 1069 CSCNDCW 1075
            C+C D W
Sbjct: 868  CTCRDYW 874



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 147/680 (21%), Positives = 274/680 (40%), Gaps = 130/680 (19%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y++ G+ + A   F   F R+   W+  +  Y     + +E   ++ E+   G+ 
Sbjct: 137 TMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQ-NNQFREAFGLFIEMGRHGID 195

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  +L   T+  +     +VH+ +IK G+D  + +  +L++ Y K R +  A +L
Sbjct: 196 PDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQL 255

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+++ +  D + +N ++    +      AI LF +MQ    +    T   +L A  ++  
Sbjct: 256 FNDIPE-RDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDD 314

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+Q+HG+V+K     N+ V N L+  YS+++++  A+++F  M + +  S+N +++ 
Sbjct: 315 IEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTC 374

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y                           WN         G  +  L L + +Q  GF   
Sbjct: 375 Y--------------------------AWN---------GRVKESLELFKELQFTGFDRR 399

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
               + +L        L  GR+ H   +      ++ VG SL+DMY K      A  +F 
Sbjct: 400 NFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFS 459

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--------- 642
           ++  ++ V W ++IS Y  KGL  +  K+  +M+  +I  D  ++ S+V           
Sbjct: 460 DLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTL 519

Query: 643 --------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                                     Y+  G  K+AL +   M       N V+W +LIS
Sbjct: 520 GKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMP----VRNSVSWNALIS 575

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-------KEIHCLC 729
              QN +   +L+ F +M +  ++P+S ++ S+L  C   GL++ G         I+ L 
Sbjct: 576 AYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLV 635

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            K    K+ Y +T  IDM  + G    A ++                             
Sbjct: 636 PK----KEHYAST--IDMLCRGGRFDEAEKL----------------------------- 660

Query: 790 LLFHELLETGFQPDAITFTALLAAC---KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
                + +  F+PD I ++++L +C   KN  L ++      +M    +  P    Y  M
Sbjct: 661 -----MAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAP----YVTM 711

Query: 847 VDLLGKAGYLDEAWDFIRTM 866
            ++   AG  D      + M
Sbjct: 712 SNIYAAAGEWDNVGKVKKAM 731



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 148/323 (45%), Gaps = 15/323 (4%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H+Q I    I  S+ +V  SL+  Y + G+F  A + F     +S   W++ +  Y   G
Sbjct: 423 HSQTIVTDAI--SEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKG 480

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
              ++ L+++ E+    +   +     I++ C  L +  LG ++H+ +I  G+  +V   
Sbjct: 481 LH-EDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSG 539

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KC  ++ A ++F E+  + + + WN +I    +N   +  ++LF EM  S  
Sbjct: 540 SALVDMYAKCGSIKDALQMFQEMP-VRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGL 598

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHG-----YVLKSALESNLSVCNCLISMYSRNNKL 447
           +  S +++ +L AC+  G   EG Q        Y L    E   S     I M  R  + 
Sbjct: 599 QPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYAST----IDMLCRGGRF 654

Query: 448 ELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           + A ++   M  + +   W+S+++S       ++A    N++ + ++  D   +  + + 
Sbjct: 655 DEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNI 714

Query: 507 HFTHGSYQNVLTLLRGMQSLGFR 529
           +   G + NV  + + M+  G +
Sbjct: 715 YAAAGEWDNVGKVKKAMRERGVK 737


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/630 (35%), Positives = 352/630 (55%), Gaps = 32/630 (5%)

Query: 478  VDVAWSLFNKMNSSRI-QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
            +D   + ++K+  S++ +P+I  WN ++ G  +   + + + L   M+  GF PN  ++ 
Sbjct: 59   LDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIP 118

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             VL+A      ++ G + H  +++ G D+D++V TSL+ +YVK D   +A +VFD++ ++
Sbjct: 119  FVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK 178

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
            N+V+W ++I+GY   G F  A     ++ E  +KPD  S   +++  +  G       I 
Sbjct: 179  NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID 238

Query: 657  HHMKNSGIYPNV-------------------------------VTWTSLISGSLQNENYR 685
             ++ +SG+  NV                               V+W+++I G   N   +
Sbjct: 239  RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQ 298

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            ++L  F QMQ E++KP+  TM  +L  C  LG L  G     L  +N F+ +  + T LI
Sbjct: 299  QALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALI 358

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            DMYSK G++  A E+F     K    WN M++G ++ G+ K    LF  + + G +PD  
Sbjct: 359  DMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF  LL  C + G V EG ++F++M   +++ P+IEHY CMVDLLG+AG L+EA   I  
Sbjct: 419  TFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINN 478

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP KP+A +WGALLG C++H     AE   ++L +LEP NS NY  + N+ + ++RWE+ 
Sbjct: 479  MPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEA 538

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
            E++R +M E  ++ +   SWI+ID IVH F      H  + +IY +L  L  E+K +G+V
Sbjct: 539  EKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHV 598

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            P T  V  DI+EEEK   L  H+EKLA+ +GL+ +     IRV+KN RVC DCH A K +
Sbjct: 599  PTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLI 658

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S +  REI +RD  RFH F +G CSC D W
Sbjct: 659  SKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 249/549 (45%), Gaps = 62/549 (11%)

Query: 172 TSLALPPTDTLAKQAQL-SCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV 230
           T L  P +   +K  ++ + +S+G  F N+         +K  HA+++++    + D+ +
Sbjct: 2   TILTSPTSPVFSKALEIKNYLSNGLNFFNQ---------LKHIHARLLRLH--LDQDNYL 50

Query: 231 KSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
            +LI    L+FG    +   F      +   W++ +    S      + + ++G + G G
Sbjct: 51  LNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVS-KDCFDDAIHLYGSMRGGG 109

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
            +  +  +  +LK C + +   LG+++H+ L+K G+D DV +K +L++ Y KC + + A 
Sbjct: 110 FLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDAL 169

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           K+F ++ D ++ + W  II   + +  +  AI  F+++     K  S ++VK+L ACA++
Sbjct: 170 KVFDDIPD-KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL 228

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G    G+ I  Y+  S +  N+ V   L+ MY +   LE A  +F +M + ++ SW++MI
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
             Y   G    A  LF +M S  ++PD  T                              
Sbjct: 289 QGYAFNGLPQQALDLFFQMQSENLKPDCYT------------------------------ 318

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                +  VL A   L  L  G  +   + RN    +  +GT+L+DMY K   +  A E+
Sbjct: 319 -----MVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEI 373

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F  MK ++ V WN+++ G    G       + + +E+  I+PD  ++  L+ G +  G  
Sbjct: 374 FTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFV 433

Query: 650 KEALVIIHHMKNS-GIYPNVVTWTSLIS----GSLQNENYRESLKFFIQMQQEDIKPNST 704
            E     ++MK    + P++  +  ++       L NE ++        +    +KPN+ 
Sbjct: 434 NEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQ-------LINNMPMKPNAV 486

Query: 705 TMSSLLQTC 713
              +LL  C
Sbjct: 487 VWGALLGGC 495



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 79/208 (37%), Gaps = 12/208 (5%)

Query: 701 PNSTTMSSLLQT----CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           P S   S  L+       GL      K IH   L+    +D Y+   ++      G+   
Sbjct: 7   PTSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNY 66

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           ++ VF +     +  WN MI G        +AI L+  +   GF P+  T   +L AC  
Sbjct: 67  SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR 126

Query: 817 SGLVEEGWKYFDSM---STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
              V  G K    +     D+++       + ++ L  K    D+A      +P K +  
Sbjct: 127 KLDVRLGLKIHSLLVKAGYDHDVFVK----TSLLSLYVKCDNFDDALKVFDDIPDK-NVV 181

Query: 874 IWGALLGSCRIHGHLEYAEIASRRLFKL 901
            W A++      GH   A  A ++L ++
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEM 209


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/753 (32%), Positives = 386/753 (51%), Gaps = 54/753 (7%)

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQFS-S 391
            +L+  Y     + +A   F  V     D +L N +I    R      A+ +FR +  S S
Sbjct: 93   SLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGS 152

Query: 392  AKAISRTIVKMLQACAKVG--AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
             +    +   +L A   +   +     Q+   VLKS     LSV N L+++Y +   LE 
Sbjct: 153  LRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEA 212

Query: 450  ---ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
               A +V D M D +  +W +M+  Y   G V  A S+F +++   ++ D++ WN ++SG
Sbjct: 213  TRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVD---VKFDVV-WNAMISG 268

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY- 565
            +   G       L R M       +  + + VL A        +G+  HG I R   ++ 
Sbjct: 269  YVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFV 328

Query: 566  ---DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
                L V  +L+ +Y K   +  A+ +FDNMK++                          
Sbjct: 329  PEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK-------------------------- 362

Query: 623  QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                     D+VSWN+++SGY       +A+ +   M     Y N ++W  ++SG +   
Sbjct: 363  ---------DVVSWNTILSGYVESSCLDKAVEVFEEMP----YKNELSWMVMVSGYVHGG 409

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               ++LK F +M+ ED+KP   T +  +  CG LG L++GK++H   ++ GF        
Sbjct: 410  FSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGN 469

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             LI MY++ G +K A  +F    N    SWN MI     +G+G+EA+ LF  ++  G  P
Sbjct: 470  ALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYP 529

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D I+F  +L AC +SGLV+EG++YF+SM  D+ IIP  +HY+ ++DLLG+AG + EA D 
Sbjct: 530  DRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL 589

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I+TMPF+P  +IW A+L  CR  G +E    A+ +LFK+ P +   Y L+ N  + + RW
Sbjct: 590  IKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRW 649

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
             D  R+R  M + GVK     SWI+    VHVF      HP   ++Y  L  + + M+KL
Sbjct: 650  VDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKL 709

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVPDT+ V  D++  +K  +L +H+E+LA+ +GL+K    A + V+KN R+C DCH   
Sbjct: 710  GYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVM 769

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +MS   GREI +RD  RFHHF++GECSC + W
Sbjct: 770  MFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 137/310 (44%), Gaps = 37/310 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y+  GD  +A   F     +    W++ +  Y    G V E  E++  +  + V 
Sbjct: 233 TMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGY-VHSGMVVEAFELFRRMVLERVP 291

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF----DVHLKCALMNFYGKCRDVES 347
                 T +L  C     F  G  VH  + +   +F     + +  AL+  Y KC ++  
Sbjct: 292 LDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAV 351

Query: 348 ANKLFSEVSDLEDDLLWNEIIM-----------------VKLRNE-KW------------ 377
           A ++F  +   +D + WN I+                  +  +NE  W            
Sbjct: 352 ARRIFDNMKS-KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGF 410

Query: 378 -ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            E+A+KLF  M+    K    T    + AC ++G+   GKQ+HG++++   E + S  N 
Sbjct: 411 SEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNA 470

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+MY+R   ++ A  +F  M + +  SWN+MIS+    G+   A  LF++M +  I PD
Sbjct: 471 LITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPD 530

Query: 497 IITWNCLLSG 506
            I++  +L+ 
Sbjct: 531 RISFLTVLTA 540


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/790 (30%), Positives = 411/790 (52%), Gaps = 82/790 (10%)

Query: 322  KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
            +  F  D+     +++ Y K  ++  A ++F + +D    + W  +I    ++ ++ +A 
Sbjct: 72   RNSFSIDI-----IISGYVKSGNLTVARRIFDD-TDERTVVAWTTMIGAYSKSNRFGDAF 125

Query: 382  KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            KLF EM  S ++    T + +L  C  +    E  Q H  ++K     N  VCN L+  Y
Sbjct: 126  KLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSY 185

Query: 442  SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
             +   L+ A R+F  M       W+S                              +++N
Sbjct: 186  FKTGGLDSARRLFLEM-----CGWDS------------------------------VSFN 210

Query: 502  CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
             +++G+  +G  +  + L   MQ+LGF+P+  + + V+ A   L    +G++ HG++++ 
Sbjct: 211  VMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKT 270

Query: 562  GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG--------- 612
                +++VG + +D Y K+DC+   +++F+ M   + V++N +I+ Y + G         
Sbjct: 271  SFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLF 330

Query: 613  ------------------LFVNAKKMLNQMEEE--------EIKPDLVSWNSLVSGYSIW 646
                              L + A  +  QM  +           PD    NSLV  Y+  
Sbjct: 331  QELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKC 390

Query: 647  GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
            G+ +EA  I   + +    P    WT++IS ++Q   +   LK F +M++ ++  +  T 
Sbjct: 391  GKFEEADRIFLRLSSRSTVP----WTAMISANVQRGLHENGLKLFYEMRRANVSADQATF 446

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
            + +L+    L  +  GK++H   +++GF+ + Y    L+DMY+   ++K A + F + + 
Sbjct: 447  ACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCALLDMYANCASIKDAIKTFEEMSE 505

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            + + +WN ++  +A  G+GK  +  F E++ +G+QPD+++F  +L AC +  LVEEG KY
Sbjct: 506  RNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKY 565

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F+ MS  YN+ P  EHY+ MVD L ++G  DEA   +  MPF+PD  +W ++L SCRIH 
Sbjct: 566  FNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHK 625

Query: 887  HLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
            +   A  A+ +LF ++   ++A Y  M N+ A + +W+ V +++ +M + GV+ +  +SW
Sbjct: 626  NYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSW 685

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            ++I   VHVFSA    HP   EI  ++  L  +M+K GY PD  C +Q++D+E K   L 
Sbjct: 686  VEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLK 745

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+E+LAI + L+ T   +PI V+KN R C+DCH A K +S + GREI +RD  RFHHFR
Sbjct: 746  YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFR 805

Query: 1066 EGECSCNDCW 1075
            +G CSC D W
Sbjct: 806  DGSCSCGDYW 815



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/520 (24%), Positives = 224/520 (43%), Gaps = 47/520 (9%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L   N       +   HAQ++K+G   N   +  +L+  Y + G   SA + F      
Sbjct: 146 LLTGCNDLEVAKELYQAHAQIVKLGHHLNHR-VCNTLLDSYFKTGGLDSARRLFLEMCGW 204

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               ++  +  Y +  G  +E +E++ E+   G          ++     L     G ++
Sbjct: 205 DSVSFNVMITGYAN-NGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQI 263

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H  ++K  F  +V +  A ++FY K   V    KLF+E+ +L D + +N II       K
Sbjct: 264 HGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPEL-DGVSYNVIITAYAWVGK 322

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            + +I LF+E+QF++    +     ML   A       G+Q+H  V+ S  + +  V N 
Sbjct: 323 VKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNS 382

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           L+ MY++  K E A R+F  +   +   W +MIS+    G  +    LF +M  + +  D
Sbjct: 383 LVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSAD 442

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
             T+ C                                   VL+A   L  +  G++ H 
Sbjct: 443 QATFAC-----------------------------------VLKASANLASILLGKQLHS 467

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
            ++R+G   ++Y G +L+DMY     +++A + F+ M  RN+V WN+L+S Y   G    
Sbjct: 468 CVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKG 526

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY---PNVVTWTS 673
             K   +M     +PD VS+  +++  S     +E L   + M  SG+Y   P    +T+
Sbjct: 527 TLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDM--SGVYNLAPKREHYTA 584

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           ++    ++  + E+ K   QM  E   P+    +S+L +C
Sbjct: 585 MVDALCRSGRFDEAEKLMGQMPFE---PDEIVWTSVLNSC 621



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 162/365 (44%), Gaps = 38/365 (10%)

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL-RNGLDYDLYVGTSLMDMYVKNDCLQN 585
           GF P  S  + +++ ++E   L   R+    +  RN    D+ +       YVK+  L  
Sbjct: 38  GFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISG-----YVKSGNLTV 92

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           A+ +FD+   R +VAW ++I  Y     F +A K+  +M     +PD V++ +L++G + 
Sbjct: 93  ARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCND 152

Query: 646 WGQSKE-------ALVIIHHM-------------KNSGIYP-----------NVVTWTSL 674
              +KE        + + HH+             K  G+             + V++  +
Sbjct: 153 LEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVM 212

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           I+G   N    E+++ F++MQ    KP+  T ++++    GL     G++IH   +K  F
Sbjct: 213 ITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSF 272

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
           I++ +V    +D YSK   +   R++F +       S+N +I  +A  G  KE+I LF E
Sbjct: 273 IRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQE 332

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
           L  T F      F  +L+   +S  ++ G +    +       P     + +VD+  K G
Sbjct: 333 LQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSM-ADPDFRVSNSLVDMYAKCG 391

Query: 855 YLDEA 859
             +EA
Sbjct: 392 KFEEA 396



 Score =  113 bits (282), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 122/597 (20%), Positives = 239/597 (40%), Gaps = 81/597 (13%)

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           I   ++K+  +   S  N +I   S   +L  A ++ D M + N  S + +IS Y   G 
Sbjct: 30  IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
           + VA  +F+  +    +  ++ W  ++  +     + +   L   M   G +P+  +   
Sbjct: 90  LTVARRIFDDTD----ERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYIT 145

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           +L    +L + K   ++H  I++ G   +  V  +L+D Y K   L +A+ +F  M   +
Sbjct: 146 LLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWD 205

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY-----SIWGQSKEA 652
            V++N +I+GY   GL   A ++  +M+    KP   ++ +++S       + +GQ    
Sbjct: 206 SVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHG 265

Query: 653 LVI--------------------------IHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
            V+                          +  + N     + V++  +I+        +E
Sbjct: 266 FVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKE 325

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           S+  F ++Q       +    ++L        LQ G+++H   + +    D  V+  L+D
Sbjct: 326 SIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVD 385

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
           MY+K G  + A  +F + ++++   W  MI      G  +  + LF+E+       D  T
Sbjct: 386 MYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQAT 445

Query: 807 FTALLAACKN----------------SGL------------------VEEGWKYFDSMST 832
           F  +L A  N                SG                   +++  K F+ MS 
Sbjct: 446 FACVLKASANLASILLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIKDAIKTFEEMS- 504

Query: 833 DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR----IHGHL 888
           + N++      S         G L    + I +  ++PD+  +  +L +C     +   L
Sbjct: 505 ERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMS-GYQPDSVSFLCILTACSHCRLVEEGL 563

Query: 889 EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM----DEVGVKSVL 941
           +Y    S  ++ L P    +Y  M++ L  S R+++ E+L   M    DE+   SVL
Sbjct: 564 KYFNDMS-GVYNLAP-KREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVL 618



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 36/282 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G F  A + F    SRS   W++ +      G   +  L+++ E+    V 
Sbjct: 382 SLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH-ENGLKLFYEMRRANVS 440

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +LK    L +  LG ++H+ +I+ GF  +V+  CAL++ Y  C  ++ A K 
Sbjct: 441 ADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKT 499

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+S+  + + WN ++    +N   +  +K F EM  S  +  S + + +L AC+    
Sbjct: 500 FEEMSE-RNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRL 558

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
             EG               L   N +  +Y+   K E                + +M+ +
Sbjct: 559 VEEG---------------LKYFNDMSGVYNLAPKRE---------------HYTAMVDA 588

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
               G  D A  L  +M     +PD I W  +L+    H +Y
Sbjct: 589 LCRSGRFDEAEKLMGQMP---FEPDEIVWTSVLNSCRIHKNY 627


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/707 (33%), Positives = 376/707 (53%), Gaps = 68/707 (9%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L+AC +V     GK+IHG+VLK  L+ ++ V N L+ MY     +E A  VFD M    
Sbjct: 100  VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKM---- 155

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                           ++ D+++W+ ++     +  +   L L+R
Sbjct: 156  -------------------------------MERDVVSWSTMIRSLSRNKEFDMALELIR 184

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS--LMDMYVK 579
             M  +  RP+  ++  ++    +   ++ G+  H Y++RN  +  + V T+  L+DMY K
Sbjct: 185  EMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAK 244

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
               L  A+++F+ +  + +V+W ++I+G           K+  +M+EE I P+ ++  SL
Sbjct: 245  CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSL 304

Query: 640  V---------------------SGYSIWGQSKEALVIIH----------HMKNSGIYPNV 668
            +                     +G+S+      ALV ++           + +S    +V
Sbjct: 305  IVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDV 364

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            + WT+++S   Q     ++   F QM+   ++P   T+ SLL  C   G L  GK +H  
Sbjct: 365  MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 424

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
              K     D  + T L+DMY+K G++ +A  +F ++ ++ +  WN +I GFA++G G+EA
Sbjct: 425  IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 484

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            + +F E+   G +P+ ITF  LL AC ++GLV EG K F+ M   + ++P IEHY CMVD
Sbjct: 485  LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 544

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG LDEA + I++MP KP+  +WGAL+ +CR+H + +  E+A+ +L ++EP N   
Sbjct: 545  LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY 604

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
              LM N+ A +NRW D   +R +M  VG+K     S I+++  VH F      HP    I
Sbjct: 605  NVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRI 664

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
               L  +  ++ + GYVPDT  V  +IDEEEK   L  H+EKLA+ +GL+ T    PIR+
Sbjct: 665  NEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRI 724

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +KN RVC+DCH A K +S + GR I +RD  RFHHFREG CSC D W
Sbjct: 725  VKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 250/548 (45%), Gaps = 73/548 (13%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C ++    LG E+H  ++K+G D DV +  ALM  YG+C  VE A  +F ++ +  
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME-R 158

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + W+ +I    RN++++ A++L REM F   +     +V M+   A       GK +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 420 GYVLKSALESNLSV--CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            YV++++   ++ V     L+ MY++   L LA ++F+ +    + SW +MI+       
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
           ++    LF +M    I P                   N +T+L  +   GF   G+    
Sbjct: 279 LEEGTKLFIRMQEENIFP-------------------NEITMLSLIVECGF--TGA---- 313

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
                     L+ G++ H YILRNG    L + T+L+DMY K   ++NA+ +FD+ +NR+
Sbjct: 314 ----------LQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRD 363

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ--------- 648
           ++ W +++S Y        A  + +QM    ++P  V+  SL+S  ++ G          
Sbjct: 364 VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHS 423

Query: 649 --SKE----------ALVIIH----------HMKNSGIYPNVVTWTSLISGSLQNENYRE 686
              KE          ALV ++           +    I  ++  W ++I+G   +    E
Sbjct: 424 YIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEE 483

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLI 745
           +L  F +M+++ +KPN  T   LL  C   GL+  GK++   +    G +        ++
Sbjct: 484 ALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMV 543

Query: 746 DMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           D+  ++G L  A E+ +    K     W  ++    ++ N +   L   +LLE   +P+ 
Sbjct: 544 DLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE--IEPEN 601

Query: 805 ITFTALLA 812
             +  L++
Sbjct: 602 CGYNVLMS 609



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/489 (22%), Positives = 213/489 (43%), Gaps = 51/489 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y E      A   F     R    WS+ +    S   E    LE+  E++   V 
Sbjct: 134 ALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSL-SRNKEFDMALELIREMNFMQVR 192

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD--FDVHLKCALMNFYGKCRDVESAN 349
                +  ++ L        +G  +HA +I+   +    V    AL++ Y KC  +  A 
Sbjct: 193 PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLAR 252

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           +LF+ ++  +  + W  +I   +R+ + E   KLF  MQ  +      T++ ++  C   
Sbjct: 253 QLFNGLTQ-KTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFT 311

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           GA   GKQ+H Y+L++    +L++   L+ MY + + +  A  +FDS ++ ++  W +M+
Sbjct: 312 GALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAML 371

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           S+Y     +D A++LF++M +S ++P  +T   LLS     G+                 
Sbjct: 372 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGA----------------- 414

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                             L  G+  H YI +  ++ D  + T+L+DMY K   +  A  +
Sbjct: 415 ------------------LDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRL 456

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F    +R+I  WN++I+G+   G    A  +  +ME + +KP+ +++  L+   S  G  
Sbjct: 457 FIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLV 516

Query: 650 KEALVIIHHMKNS-GIYPNVVTWTSLIS----GSLQNENYRESLKFFIQMQQEDIKPNST 704
            E   +   M ++ G+ P +  +  ++       L +E +         ++   IKPN+ 
Sbjct: 517 TEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHE-------MIKSMPIKPNTI 569

Query: 705 TMSSLLQTC 713
              +L+  C
Sbjct: 570 VWGALVAAC 578



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 8/186 (4%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           S+L+ CG +   Q GKEIH   LK G  +D +V   L+ MY +   ++ AR VF K   +
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA---LLAACKNSGLVEEGW 824
            + SW+ MI   +       A+ L  E+     +P  +   +   L A   N  + +   
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 825 KYFDSMSTDYNI-IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
            Y    S + ++ +PT    + ++D+  K G+L  A      +  K   + W A++  C 
Sbjct: 219 AYVIRNSNNEHMGVPTT---TALLDMYAKCGHLGLARQLFNGLTQKTVVS-WTAMIAGCI 274

Query: 884 IHGHLE 889
               LE
Sbjct: 275 RSNRLE 280


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 904

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 260/814 (31%), Positives = 422/814 (51%), Gaps = 76/814 (9%)

Query: 261  WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
            ++S +  Y S  G  +E + ++  +   G+          L +C K      G+++H  +
Sbjct: 101  YNSLIRGYAS-SGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLI 159

Query: 321  IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            IK  +  D+ ++ +L++FY +C +++ A K+F E+S+  + + W  +I    R E  ++A
Sbjct: 160  IKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSE-RNVVSWTSMICGYARREFAKDA 218

Query: 381  IKL-FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            + L FR ++       S T+V ++ ACAK+     G++++ ++  S +E N  + + L+ 
Sbjct: 219  VDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVD 278

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            MY + N +++A R+FD     NL   N+M S+Y   G    A  + N M  S I+PD I+
Sbjct: 279  MYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRIS 338

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
               +LS                                 + + ++LR + +G+  HGY+L
Sbjct: 339  ---MLSA--------------------------------ISSCSQLRNILWGKSCHGYVL 363

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            RNG +    +  +L+DMY+K      A  +FD M N+ +V WNS+++GY   G    A +
Sbjct: 364  RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWE 423

Query: 620  MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
              N M E+ I    VSWN+++S        +EA+ + H+M++                  
Sbjct: 424  TFNTMPEKNI----VSWNTIISALVQENMYEEAIEVFHYMQS------------------ 461

Query: 680  QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
                            QE +  +  TM S+   CG LG L   K I+    KN    D  
Sbjct: 462  ----------------QECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVR 505

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            + T L+DM+S+ G+ +SA  +F    N+ +++W   I   A+ GN + AI LF+E++E G
Sbjct: 506  LGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQG 565

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             +PD + F   L AC + GLV++G + F+SM   + + P   HY CMVDLLG+AG L+EA
Sbjct: 566  LKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEA 625

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
               I+ MP +P+  IW +LL +CR+ G++E A  A+ ++  L P  + +Y L+ N+ A +
Sbjct: 626  LQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASA 685

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
             RW D+ ++R SM E G++     S IQI    H F++    HP   +I   L  L    
Sbjct: 686  GRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRA 745

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
              LG+VPD   V  D+DE+EK  +L  H+EKLA+ +GL+ +     IR++KN RVCS CH
Sbjct: 746  SDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCH 805

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            + AK+ S V  REI LRD  RFH  R+G+CSC+D
Sbjct: 806  SFAKFASKVYNREIILRDNNRFHFIRQGKCSCSD 839


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like
            [Vitis vinifera]
          Length = 719

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/713 (34%), Positives = 380/713 (53%), Gaps = 46/713 (6%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L+ C        GK +H   +KS +  +    N  I +YS+  +L  A + F  + D N
Sbjct: 14   LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            + S+N++I++Y       +A  LF+++     +PD++++N L+S +   G     L L  
Sbjct: 74   VFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALGLFS 129

Query: 522  GMQSLGFRPNGSSVSVVLQAV-TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
            GM+ +G   +G ++S V+ A   ++ L+    + H   + +G D  + V  +L+  Y KN
Sbjct: 130  GMREMGLDMDGFTLSAVITACCDDVGLIG---QLHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 581  DCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
              L +A+ VF  M   R+ V+WNS+I  Y        A  +  +M    +  D+ +  S+
Sbjct: 187  GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIY--------------------------------PN 667
            ++ ++        L     +  +G +                                P+
Sbjct: 247  LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306

Query: 668  VVTWTSLISGSLQNENYRE-SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            +V W +++SG  QNE + E +L+ F QMQ    +PN  +   ++  C  L     GK+IH
Sbjct: 307  LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIH 366

Query: 727  CLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
             L LK+    +   V   LI MYSK GNL+ AR +F + A     S N MI G+A +G  
Sbjct: 367  SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
             E++ LF  +LE    P +ITF ++L+AC ++G VEEGW YF+ M   +NI P  EHYSC
Sbjct: 427  MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            M+DLLG+AG L EA + I  MPF P +  W +LLG+CR HG++E A  A+ ++ +LEP N
Sbjct: 487  MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            +A Y ++ N+ A + RWE+V  +R  M + GVK     SWI++ + +HVF AE + HP  
Sbjct: 547  AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV---LLSHTEKLAIVYGLMKTKS 1022
             EIY  L  +  +MK+ GYVPD R      D    G+    L  H+EKLA+ +GL+ TK 
Sbjct: 607  KEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKD 666

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              P+ V+KN R+C DCH A K++S + GREI +RD  RFH F+EG+CSC D W
Sbjct: 667  GEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 200/445 (44%), Gaps = 44/445 (9%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           GE    L ++  +   G+      L+ ++  C   +   +G ++H+  +  GFD  V + 
Sbjct: 119 GETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVN 176

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+ +YGK  D++ A ++F  +  + D++ WN +I+   ++++   A+ LF+EM     
Sbjct: 177 NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGL 236

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR-NNKLELAT 451
                T+  +L A   +     G Q HG ++K+    N  V + LI +YS+    +    
Sbjct: 237 NVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCR 296

Query: 452 RVFDSMKDHNLSSWNSMISSYT-GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           +VF+ + + +L  WN+M+S Y+    +++ A   F +M                      
Sbjct: 297 KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM---------------------- 334

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD-LYV 569
                        Q +G+RPN  S   V+ A + L     G++ H   L++ +  + + V
Sbjct: 335 -------------QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISV 381

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             +L+ MY K   LQ+A+ +FD M   N V+ NS+I+GY   G+ + +  +   M E +I
Sbjct: 382 DNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQI 441

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
            P  +++ S++S  +  G+ +E     + MK    I P    ++ +I    +     E+ 
Sbjct: 442 APTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAE 501

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
               +M      P S   +SLL  C
Sbjct: 502 NLIARMP---FNPGSIGWASLLGAC 523



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 130/570 (22%), Positives = 221/570 (38%), Gaps = 114/570 (20%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD-- 357
           +LK C        G  +H+  IK       +     +  Y KC  +  A K F ++SD  
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 358 ---------------------------LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQF 389
                                       E DL+ +N +I       +   A+ LF  M+ 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 390 SSAKAISRTIVKMLQACA-KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                   T+  ++ AC   VG      Q+H   + S  +S +SV N L++ Y +N  L+
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLI---GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 449 LATRVFDSMKD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            A RVF  M    +  SWNSMI +Y                                 G 
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAY---------------------------------GQ 217

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              GS    L L + M   G   +  +++ VL A T L  L  G + HG +++ G   + 
Sbjct: 218 HQEGS--KALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 568 YVGTSLMDMYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV-NAKKMLNQME 625
           +VG+ L+D+Y K    + + ++VF+ +   ++V WN+++SGY     F+ +A +   QM+
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 626 EEEIKPDLVSW------------------------------------NSLVSGYSIWGQS 649
               +P+  S+                                    N+L++ YS  G  
Sbjct: 336 GIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNL 395

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           ++A  +   M       N V+  S+I+G  Q+    ESL  F  M +  I P S T  S+
Sbjct: 396 QDARRLFDRMAEH----NTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISV 451

Query: 710 LQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANK 767
           L  C   G ++ G    + +  K     +A   + +ID+  ++G L  A   + R   N 
Sbjct: 452 LSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNP 511

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLE 797
               W  ++     +GN + A+   +++L+
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQ 541


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/721 (34%), Positives = 374/721 (51%), Gaps = 87/721 (12%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            L+AC+ +   H G+ IH + + + L+++L V   L+ MY +   L  A  +F +M     
Sbjct: 17   LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR-- 74

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
                                             D++ WN +L+G+  HG Y + +  L  
Sbjct: 75   ---------------------------------DLVAWNAMLAGYAHHGMYHHAVAHLLS 101

Query: 523  MQSL--GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD----------LYVG 570
            MQ      RPN S++  +L  + +   L  G   H Y +R  L  +          + +G
Sbjct: 102  MQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 161

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA----KKMLNQ--- 623
            T+L+DMY K   L  A+ VFD M  RN V W++LI G+        A    K ML Q   
Sbjct: 162  TALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 221

Query: 624  -----------------------------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                                         + +  +  DL + NSL+S Y+  G   +A+ 
Sbjct: 222  FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 281

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            +   M       + V++++L+SG +QN    E+   F +MQ  +++P++ TM SL+  C 
Sbjct: 282  LFDEMA----VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACS 337

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             L  LQ+G+  H   +  G   +  +   LIDMY+K G +  +R+VF    ++ + SWN 
Sbjct: 338  HLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNT 397

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MI G+ I+G GKEA  LF E+   GF PD +TF  LL+AC +SGLV EG  +F  M   Y
Sbjct: 398  MIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGY 457

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             + P +EHY CMVDLL + G+LDEA++FI++MP + D  +W ALLG+CR++ +++  +  
Sbjct: 458  GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKV 517

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            SR + +L P  + N+ L+ N+ + + R+++   +R      G K     SWI+I+  +H 
Sbjct: 518  SRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHA 577

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP + EIY EL +++  +KKLGY PDT  V QD++EEEK K L+ H+EKLAI 
Sbjct: 578  FVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIA 637

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            YG++       I V KN RVC DCHT  K++SLV+ R I +RD  RFHHF+ G+CSC D 
Sbjct: 638  YGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDF 697

Query: 1075 W 1075
            W
Sbjct: 698  W 698



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 122/544 (22%), Positives = 224/544 (41%), Gaps = 93/544 (17%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LK C+ L     G  +H   I  G   D+ +  AL++ Y KC  +  A  +F+ +    D
Sbjct: 17  LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA-RD 75

Query: 361 DLLWNEIIMVKLRNEKWENAIK--LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            + WN ++     +  + +A+   L  +MQ    +  + T+V +L   A+ GA  +G  +
Sbjct: 76  LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135

Query: 419 HGYVLKSALESN----------LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           H Y +++ L  N          + +   L+ MY++   L  A RVFD+M   N  +W+++
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 195

Query: 469 ISSYTGLGYVDVAWSLFNKM------------------------------------NSSR 492
           I  +     +  A+ LF  M                                      S 
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 255

Query: 493 IQPDIITWNCLLS-------------------------------GHFTHGSYQNVLTLLR 521
           +  D+   N LLS                               G+  +G  +    + +
Sbjct: 256 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            MQ+    P+ +++  ++ A + L  L++GR SHG ++  GL  +  +  +L+DMY K  
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 375

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            +  +++VF+ M +R+IV+WN++I+GY   GL   A  +  +M      PD V++  L+S
Sbjct: 376 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 435

Query: 642 GYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             S  G   E     H M +  G+ P +  +  ++    +     E+ +F   +Q   ++
Sbjct: 436 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF---IQSMPLR 492

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG----LIDMYSKSGNLKS 756
            +     +LL  C     +  GK++  +  + G        TG    L ++YS +G    
Sbjct: 493 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELG-----PEGTGNFVLLSNIYSAAGRFDE 547

Query: 757 AREV 760
           A EV
Sbjct: 548 AAEV 551



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 182/368 (49%), Gaps = 24/368 (6%)

Query: 143 HSIYHHFNTRT-SINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISS--GFCFLN 199
           H +YHH      S+    H  +PN+     T +AL P   LA+Q  L+  +S   +C   
Sbjct: 89  HGMYHHAVAHLLSMQMQMHRLRPNA----STLVALLPL--LAQQGALAQGTSVHAYCIRA 142

Query: 200 ETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYA 259
             +  R   + KSK    + +G          +L+  Y + G    A + F    +R+  
Sbjct: 143 CLHPNR---NSKSKLTDGVLLGT---------ALLDMYAKCGSLLYARRVFDAMPARNEV 190

Query: 260 DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHA 318
            WS+ +  +       Q  L ++  +  +G+ F S   +   L+ C  L    +G ++HA
Sbjct: 191 TWSALIGGFVLCSRMTQAFL-LFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHA 249

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
            L K G   D+    +L++ Y K   ++ A  LF E++ ++D + ++ ++   ++N + E
Sbjct: 250 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA-VKDTVSYSALVSGYVQNGRAE 308

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A  +F++MQ  + +  + T+V ++ AC+ + A   G+  HG V+   L S  S+CN LI
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY++  +++L+ +VF+ M   ++ SWN+MI+ Y   G    A +LF +MN+    PD +
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428

Query: 499 TWNCLLSG 506
           T+ CLLS 
Sbjct: 429 TFICLLSA 436



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 12/198 (6%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M +  + PN+ T    L+ C  L     G+ IH   +  G   D +V+T L+DMY K   
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI--LLFHELLETGFQPDAITFTALL 811
           L  A  +F     + L +WN M+ G+A +G    A+  LL  ++     +P+A T  ALL
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 812 AACKNSGLVEEGWKY---------FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
                 G + +G              + ++   +   +   + ++D+  K G L  A   
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 863 IRTMPFKPDATIWGALLG 880
              MP + + T W AL+G
Sbjct: 181 FDAMPARNEVT-WSALIG 197


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/742 (33%), Positives = 390/742 (52%), Gaps = 55/742 (7%)

Query: 340  GKCRDVESANKLFSEVSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQFS-SAKAISR 397
            G+ RD   A   F  V     D +L N ++    R      A+ +F  +  S S +    
Sbjct: 106  GRLRD---AAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDY 162

Query: 398  TIVKMLQACAKVGAFH-----EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL--- 449
            +   ++ A   VG  H        Q+H  VLKS   + LSV N LI++Y + +  E    
Sbjct: 163  SFTALISA---VGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWD 219

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A +V D M D +  +W +M+  Y   G V+ A S+F +++    + D++ WN ++SG+  
Sbjct: 220  ARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG---KFDVV-WNAMISGYVQ 275

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
             G   +   L R M S     +  + + VL A        +G+  HG I+R         
Sbjct: 276  SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR--------- 326

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
               L   +V    L                  N+L++ Y   G  V AK++ + M  +  
Sbjct: 327  ---LQPNFVPEAALP---------------VNNALVTLYSKGGKIVIAKRIFDTMNLK-- 366

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
              D+VSWN+++SGY   G   +A+ +   M     Y N ++W  ++SG +      ++LK
Sbjct: 367  --DVVSWNTILSGYIDSGCLDKAVEVFKVMP----YKNDLSWMVMVSGYVHGGLSEDALK 420

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F QM+ ED+KP   T +  +  CG LG L++G+++H   ++ GF         L+ MY+
Sbjct: 421  LFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYA 480

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G +  AR VF    N    SWN MI     +G+G+EA+ LF +++  G  PD I+F  
Sbjct: 481  KCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLT 540

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L AC ++GLV+EG+ YF+SM  D+ I P  +HY+ ++DLLG++G + EA D I+TMPF+
Sbjct: 541  ILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE 600

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            P  +IW A+L  CR +G +E+   A+ +LF++ P +   Y L+ N  + + RW D  R+R
Sbjct: 601  PTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVR 660

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              M + GVK     SWI++   +HVF      HP   E+Y  L  + + M+KLGYVPDT+
Sbjct: 661  KLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTK 720

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V  D++  EK  +L +H+EKLA+ +GL+K    A + V+KN R+C DCHTA  +MS   
Sbjct: 721  FVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAV 780

Query: 1050 GREIFLRDGARFHHFREGECSC 1071
            GREI +RD  RFHHF++GECSC
Sbjct: 781  GREIVVRDVRRFHHFKDGECSC 802



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 191/389 (49%), Gaps = 13/389 (3%)

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           Y +  DV +A  +F EV D + D++WN +I   +++    +A +LFR M          T
Sbjct: 242 YVRRGDVNAARSVFEEV-DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFT 300

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKS----ALESNLSVCNCLISMYSRNNKLELATRVF 454
              +L ACA  G F  GK +HG +++       E+ L V N L+++YS+  K+ +A R+F
Sbjct: 301 FTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIF 360

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D+M   ++ SWN+++S Y   G +D A  +F  M       + ++W  ++SG+   G  +
Sbjct: 361 DTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSE 416

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
           + L L   M++   +P   + +  + A  EL  LK+GR+ H ++++ G +     G +L+
Sbjct: 417 DALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALL 476

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            MY K   + +A+ VF  M N + V+WN++IS     G    A ++ +QM  E I PD +
Sbjct: 477 TMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRI 536

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           S+ ++++  +  G   E       MK   GI P    +  LI    ++    E+      
Sbjct: 537 SFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKT 596

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           M  E   P  +   ++L  C   G ++ G
Sbjct: 597 MPFE---PTPSIWEAILSGCRTNGDMEFG 622



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 145/322 (45%), Gaps = 38/322 (11%)

Query: 220 MGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQEL 278
           + ++ + DD+   +++  Y+  GD  +A   F     +    W++ +  Y    G   + 
Sbjct: 224 LDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ-SGMCADA 282

Query: 279 LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF----DVHLKCA 334
            E++  +  + V       T +L  C     F  G  VH  +I+   +F     + +  A
Sbjct: 283 FELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNA 342

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII-----------------MVKLRNE-K 376
           L+  Y K   +  A ++F +  +L+D + WN I+                 ++  +N+  
Sbjct: 343 LVTLYSKGGKIVIAKRIF-DTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLS 401

Query: 377 W-------------ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W             E+A+KLF +M+    K    T    + AC ++GA   G+Q+H +++
Sbjct: 402 WMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLV 461

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           +   E++ S  N L++MY++   +  A  VF  M + +  SWN+MIS+    G+   A  
Sbjct: 462 QCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALE 521

Query: 484 LFNKMNSSRIQPDIITWNCLLS 505
           LF++M +  I PD I++  +L+
Sbjct: 522 LFDQMVAEGIDPDRISFLTILT 543


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g08820-like [Glycine max]
          Length = 676

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/614 (35%), Positives = 348/614 (56%), Gaps = 32/614 (5%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL-RLLKYGR 552
             P+I  +N L+ G  ++ ++++ +++   M+  GF P+  +   VL+A T L      G 
Sbjct: 63   HPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL 122

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
              H  +++ G D+D++V T L+ +Y KN  L +A++VFD +  +N+V+W ++I GY   G
Sbjct: 123  SLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESG 182

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG--------- 663
             F  A  +   + E  ++PD  +   ++   S  G       I  +M+ SG         
Sbjct: 183  CFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVAT 242

Query: 664  ----------------------IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
                                  +  +VV W++LI G   N   +E+L  F +MQ+E+++P
Sbjct: 243  SLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRP 302

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +   M  +   C  LG L+ G     L   + F+ +  + T LID Y+K G++  A+EVF
Sbjct: 303  DCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVF 362

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            +    K    +N +I G A+ G+   A  +F ++++ G QPD  TF  LL  C ++GLV+
Sbjct: 363  KGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVD 422

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G +YF  MS+ +++ PTIEHY CMVDL  +AG L EA D IR+MP + ++ +WGALLG 
Sbjct: 423  DGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGG 482

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CR+H   + AE   ++L +LEP NS +Y L+ N+ + S+RW++ E++R S+++ G++ + 
Sbjct: 483  CRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLP 542

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SW+++D +VH F      HP + +IY +L  L  ++++ GY P T  V  D++EEEK 
Sbjct: 543  GCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKE 602

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
              L  H+EKLA+ + L+ T ++  IRV+KN RVC DCH A K +S V GREI +RD  RF
Sbjct: 603  YFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRF 662

Query: 1062 HHFREGECSCNDCW 1075
            HHF EG CSC D W
Sbjct: 663  HHFTEGSCSCRDYW 676



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 203/443 (45%), Gaps = 47/443 (10%)

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKL-MAFWLGVEVHASLIKRGFDFDVHLKCA 334
           ++ + V+  +   G    +     +LK CT+L   F +G+ +H+ +IK GFD+DV +K  
Sbjct: 83  RDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTG 142

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L+  Y K   +  A K+F E+ + ++ + W  II   + +  +  A+ LFR +     + 
Sbjct: 143 LVCLYSKNGFLTDARKVFDEIPE-KNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRP 201

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
            S T+V++L AC++VG    G+ I GY+ +S    N+ V   L+ MY++   +E A RVF
Sbjct: 202 DSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVF 261

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D M + ++  W+++I  Y   G    A  +F +M    ++PD                  
Sbjct: 262 DGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCY---------------- 305

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                              ++  V  A + L  L+ G  + G +  +    +  +GT+L+
Sbjct: 306 -------------------AMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALI 346

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           D Y K   +  A+EVF  M+ ++ V +N++ISG    G    A  +  QM +  ++PD  
Sbjct: 347 DFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGN 406

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS--GSLQNENYRESLKFFI 692
           ++  L+ G +  G     LV   H   SG+  +V + T  I   G + +   R  L    
Sbjct: 407 TFVGLLCGCTHAG-----LVDDGHRYFSGM-SSVFSVTPTIEHYGCMVDLQARAGLLVEA 460

Query: 693 Q--MQQEDIKPNSTTMSSLLQTC 713
           Q  ++   ++ NS    +LL  C
Sbjct: 461 QDLIRSMPMEANSIVWGALLGGC 483



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 116/507 (22%), Positives = 218/507 (42%), Gaps = 49/507 (9%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           + H  L++ G   D +L   L+         + A  +F++     +  L+N +I   + N
Sbjct: 21  QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPH-PNIFLYNTLIRGMVSN 79

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESNLSV 433
           + + +A+ ++  M+       + T   +L+AC ++   FH G  +H  V+K+  + ++ V
Sbjct: 80  DAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFV 139

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              L+ +YS+N  L  A +VFD + + N                                
Sbjct: 140 KTGLVCLYSKNGFLTDARKVFDEIPEKN-------------------------------- 167

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
              +++W  ++ G+   G +   L L RG+  +G RP+  ++  +L A + +  L  GR 
Sbjct: 168 ---VVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRW 224

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             GY+  +G   +++V TSL+DMY K   ++ A+ VFD M  +++V W++LI GY   G+
Sbjct: 225 IDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGM 284

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
              A  +  +M+ E ++PD  +   + S  S  G  +        M       N V  T+
Sbjct: 285 PKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTA 344

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           LI    +  +  ++ + F  M+++D    +  +S  L  CG +G       +    +K G
Sbjct: 345 LIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISG-LAMCGHVGAAFG---VFGQMVKVG 400

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRK-----SANKTLASWNCMIMGFAIYGNGKEA 788
              D     GL+   + +G +      F       S   T+  + CM+   A  G   EA
Sbjct: 401 MQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEA 460

Query: 789 ILLFHELLETGFQPDAITFTALLAACK 815
             L   +     + ++I + ALL  C+
Sbjct: 461 QDLIRSM---PMEANSIVWGALLGGCR 484



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 145/317 (45%), Gaps = 7/317 (2%)

Query: 212 SKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY-E 269
           S H+ +IK G  W  D  VK+ L+  Y + G  T A K F     ++   W++ +  Y E
Sbjct: 123 SLHSLVIKTGFDW--DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIE 180

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G   E L ++  L   G+   S  L  IL  C+++     G  +   + + G   +V
Sbjct: 181 S--GCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNV 238

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  +L++ Y KC  +E A ++F  + + +D + W+ +I     N   + A+ +F EMQ 
Sbjct: 239 FVATSLVDMYAKCGSMEEARRVFDGMVE-KDVVCWSALIQGYASNGMPKEALDVFFEMQR 297

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            + +     +V +  AC+++GA   G    G +      SN  +   LI  Y++   +  
Sbjct: 298 ENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQ 357

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  VF  M+  +   +N++IS     G+V  A+ +F +M    +QPD  T+  LL G   
Sbjct: 358 AKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTH 417

Query: 510 HGSYQNVLTLLRGMQSL 526
            G   +      GM S+
Sbjct: 418 AGLVDDGHRYFSGMSSV 434



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 50/306 (16%)

Query: 706 MSSLLQTCGGLGL--LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
           M S L+ C   GL  L   K+ HCL L+ G  +D Y+   L+         + A  VF +
Sbjct: 1   MGSELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQ 60

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK-------- 815
           + +  +  +N +I G       ++A+ ++  + + GF PD  TF  +L AC         
Sbjct: 61  TPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHV 120

Query: 816 ----NSGLVEEG--WKYF-----------DSMSTD----YNIIPTIEHYSCMVDLLG--K 852
               +S +++ G  W  F           +   TD    ++ IP     S    + G  +
Sbjct: 121 GLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIE 180

Query: 853 AGYLDEAWDFIR---TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL---FKLEPCNS 906
           +G   EA    R    M  +PD+     +L +C   G     ++AS R    +  E  + 
Sbjct: 181 SGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVG-----DLASGRWIDGYMRESGSV 235

Query: 907 ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            N  +  +L+ M  +   +E  R   D +  K V+ WS      ++  +++ G P  A  
Sbjct: 236 GNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWS-----ALIQGYASNGMPKEAL- 289

Query: 967 EIYFEL 972
           +++FE+
Sbjct: 290 DVFFEM 295


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 270/816 (33%), Positives = 412/816 (50%), Gaps = 83/816 (10%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            ++K C  ++   LG  +H  +IK G   DV +  AL+  YGKC  V+ A K+F  +   E
Sbjct: 152  VIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP--E 209

Query: 360  DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQ 417
             +L+ WN +I     N    ++  L  EM           T+V +L  CA  G    G  
Sbjct: 210  TNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMG 269

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            IHG  +K  L   + V N ++ MYS+                                GY
Sbjct: 270  IHGLAVKLGLSEEVMVNNAMVYMYSK-------------------------------CGY 298

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            ++ A   F K N+     ++++WN ++S     G       LL+ MQ  G     + V++
Sbjct: 299  LNEAQMSFVKNNNK----NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTI 354

Query: 538  --VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              VL A  +   L+  +E HGY  R+   + + +  + +  Y K   L +A++VF  + +
Sbjct: 355  LNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGD 413

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------V 640
            + + +WN+LI G+   G    A  +L QM     +PD  + +SL               +
Sbjct: 414  KTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEI 473

Query: 641  SGYSI--------------------WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
             GY +                     G++  A V+   MK+     N+V+W ++ISG  Q
Sbjct: 474  HGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDK----NLVSWNAMISGYSQ 529

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            N    ESL  F +   E I+ +   + S+   C  L  L+ GKE H   LK    +DA+V
Sbjct: 530  NGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFV 589

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
               +IDMY+KSG +K +R+VF    +K +ASWN +I+   I+G+GKEAI L+  + + G 
Sbjct: 590  GCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQ 649

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII-PTIEHYSCMVDLLGKAGYLDEA 859
             PD  T+  +L AC ++GLVEEG KYF  M  ++N+I P +EHY+C++D+L +AG LD+A
Sbjct: 650  MPDRFTYIGILMACGHAGLVEEGLKYFKEMQ-NFNLIEPKLEHYACLIDMLARAGRLDDA 708

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
               +  MP + D  IW +LL SCR  G LE  E  +++L +LEP  + NY L+ NL A  
Sbjct: 709  LRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGL 768

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
             +W+ V R+R  M E+G++     SWI++   V+ F    +  P + EI      L   +
Sbjct: 769  GKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERI 828

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
             ++GY P+T  V  ++ EEEK  +L  H+EKLAI +GL+KT     +R+ KN R+C+DCH
Sbjct: 829  SEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCH 888

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             AAK +S    REI +RD  RFHHFR+G CSC D W
Sbjct: 889  NAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 244/516 (47%), Gaps = 47/516 (9%)

Query: 214 HAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H   +K+G   + + MV  ++++ Y + G    A  +F    +++   W++ +  + S  
Sbjct: 271 HGLAVKLG--LSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAF-SLE 327

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
           G+V E   +  E+  +G   ++  +TI  +L  C   +      E+H    +  F   V 
Sbjct: 328 GDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VE 386

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           L  A +  Y KC  + SA K+F  + D +    WN +I    +N     A+ L  +M +S
Sbjct: 387 LSNAFILAYAKCGALNSAEKVFHGIGD-KTVSSWNALIGGHAQNGDPRKALHLLFQMTYS 445

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             +    TI  +L ACA + +   GK+IHGYVL++ LE++  V   L+S Y    K   A
Sbjct: 446 GQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSA 505

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             +FD MKD NL SWN+MIS Y+  G    + +LF K  S  IQ   I            
Sbjct: 506 RVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEI------------ 553

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                                  ++  V  A ++L  L+ G+E+HGY+L+     D +VG
Sbjct: 554 -----------------------AIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVG 590

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            S++DMY K+ C++ +++VFD +K++N+ +WN++I  +   G    A ++  +M++    
Sbjct: 591 CSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQM 650

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG-IYPNVVTWTSLISGSLQNENYRESLK 689
           PD  ++  ++      G  +E L     M+N   I P +  +  LI    +     ++L+
Sbjct: 651 PDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALR 710

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
              +M +E    ++   SSLL++C   G L+ G+++
Sbjct: 711 LVNEMPEE---ADNRIWSSLLRSCRTFGALEIGEKV 743



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 208/453 (45%), Gaps = 80/453 (17%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC-LISMYSRNNKLELATRVFDSMKDH 460
           +LQAC        G+++H +V  S    N  V N  LI MY+       +  VFD+M+  
Sbjct: 49  LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           NL                                   I WN L+SG+  +G Y +V+ + 
Sbjct: 109 NL-----------------------------------IQWNALVSGYTRNGLYGDVVKVF 133

Query: 521 RGMQS-LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             + S   F+P+  +   V++A   +  ++ G   HG +++ GL  D++VG +L+ MY K
Sbjct: 134 MDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGK 193

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKPDLVSW-- 636
              +  A +VFD M   N+V+WNS+I  +   G   ++  +L +M  EE + PD+V+   
Sbjct: 194 CGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVT 253

Query: 637 ---------------------------------NSLVSGYSIWGQSKEALVIIHHMKNSG 663
                                            N++V  YS  G   EA   +  +KN+ 
Sbjct: 254 ILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQ--MSFVKNNN 311

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFF--IQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
              NVV+W ++IS      +  E+      +Q+Q E++K N  T+ ++L  C     L++
Sbjct: 312 --KNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRS 369

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            KE+H    ++ F +   ++   I  Y+K G L SA +VF    +KT++SWN +I G A 
Sbjct: 370 LKELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQ 428

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            G+ ++A+ L  ++  +G QPD  T ++LL AC
Sbjct: 429 NGDPRKALHLLFQMTYSGQQPDWFTISSLLLAC 461



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 52/325 (16%)

Query: 534 SVSVVLQAVTELRLLKYGRESHGYI-----LRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           ++ ++LQA    + ++ GR  H ++      RN    D  + T L+ MY       +++ 
Sbjct: 45  AIGLLLQACGNQKDIETGRRLHKFVSDSTHYRN----DYVLNTRLIKMYAMCGSPLDSRL 100

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM-LNQMEEEEIKPDLVSW----------- 636
           VFDNM+ +N++ WN+L+SGY   GL+ +  K+ ++ + + + +PD  ++           
Sbjct: 101 VFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGIL 160

Query: 637 ------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                                   N+LV  Y   G   EA+ +   M  +    N+V+W 
Sbjct: 161 DVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPET----NLVSWN 216

Query: 673 SLISGSLQNENYRESLKFFIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
           S+I    +N   R+S    ++M  +E + P+  T+ ++L  C G G +  G  IH L +K
Sbjct: 217 SMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVK 276

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            G  ++  V   ++ MYSK G L  A+  F K+ NK + SWN MI  F++ G+  EA  L
Sbjct: 277 LGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNL 336

Query: 792 FHELLETG--FQPDAITFTALLAAC 814
             E+   G   + + +T   +L AC
Sbjct: 337 LQEMQIQGEEMKANEVTILNVLPAC 361



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 7/232 (3%)

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
           + D V    L+  Y++ G   ++ ++  +M+      N++ W +L+SG  +N  Y + +K
Sbjct: 76  RNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK----NLIQWNALVSGYTRNGLYGDVVK 131

Query: 690 FFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
            F+ +  + D +P++ T  S+++ CGG+  ++ G+ IH + +K G + D +V   L+ MY
Sbjct: 132 VFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMY 191

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQPDAITF 807
            K G +  A +VF       L SWN MI  F+  G  +++  L  E+L E G  PD +T 
Sbjct: 192 GKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTV 251

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             +L  C   G V+ G      ++    +   +   + MV +  K GYL+EA
Sbjct: 252 VTILPVCAGEGEVDIGMG-IHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEA 302


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 660

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/661 (34%), Positives = 373/661 (56%), Gaps = 39/661 (5%)

Query: 416  KQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            K++HG VL    L  N SV   L+ +Y+   +  LA  +FD + D N+  +N MI SY  
Sbjct: 38   KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSY-- 95

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                                         ++ H     Y++ L + + M + GF P+  +
Sbjct: 96   -----------------------------VNNHL----YKDALLVYKTMYTQGFVPDMYT 122

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
               VL+A +    L  G + HG +L+ GLD +LYVG  L+ MY K   L+ AQ+V D + 
Sbjct: 123  YPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIP 182

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
             R++V+WNS++S Y   G F +A ++  +ME   +KP+  +  SL+   ++   + + ++
Sbjct: 183  CRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLP--AVTNTTSDNVL 240

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
             +  M       +V++W  +I+  + N   +E++  + QM+   ++P+  ++ S+L   G
Sbjct: 241  YVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYG 300

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             L  L  G+ +H    +   + +  +   LIDMY+K G L+ AR VF +   + + SW  
Sbjct: 301  DLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTS 360

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            +I  +   G G++A+ +F E+  +G  PD+I F ++LAAC ++GL+++G  YF+ M+ + 
Sbjct: 361  IISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-EC 419

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             I P +EH++C+VDLLG+AG +DEA+ FIR MP +PD  +WG LL +CR++ ++    +A
Sbjct: 420  GITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILA 479

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            + +L  L P +S  Y L+ N+ A + RW DV  +R  M+  G+K +   S ++++  VH 
Sbjct: 480  ADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHT 539

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F A    HP + +IY EL  LV +MK+LGY+P+T     D++EE+K   L  H+EKLA+ 
Sbjct: 540  FLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVA 599

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            + ++ TK   PIRV KN RVC DCH AAK +S +  REI +RD  RFHHF+EG CSC D 
Sbjct: 600  FAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDY 659

Query: 1075 W 1075
            W
Sbjct: 660  W 660



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 217/476 (45%), Gaps = 51/476 (10%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           LM  Y  C +   A  +F E++D ++ + +N +I   + N  +++A+ +++ M       
Sbjct: 60  LMRVYAACGEPGLARHIFDEITD-KNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVP 118

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T   +L+A ++  +   G QIHG VLK  L+ NL V N LI+MY +   L+ A +V 
Sbjct: 119 DMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVL 178

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD------------------ 496
           D +   ++ SWNSM+S Y   G  + A  L  +M +  ++P+                  
Sbjct: 179 DEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDN 238

Query: 497 ---------------IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                          +I+WN +++ +  +   +  + L   M++ G  P+  S+  VL A
Sbjct: 239 VLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPA 298

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
             +L  L  GR  H +  R  L  +L +  +L+DMY K  CL++A+ VF+ M+ R++V+W
Sbjct: 299 YGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSW 358

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            S+IS Y   G   +A  +  +M    + PD +++ S+++  S  G   +     + M  
Sbjct: 359 TSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE 418

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG-----GL 716
            GI P +  +  ++    +     E+  F  QM  E   P+      LL  C       +
Sbjct: 419 CGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLE---PDERVWGPLLSACRVYSNMNI 475

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTL 769
           G+L   K    L + N      YV   L ++Y+K+G   ++ + R +  +   K L
Sbjct: 476 GILAADK----LLMLNPEHSGYYVL--LSNIYAKAGRWADVAAIRSIMERKGIKKL 525



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 4/226 (1%)

Query: 248 KAFFLYFSR-SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTK 306
           K  FL  ++ S   W+  +  Y +     +E + ++ ++   GV      +  +L     
Sbjct: 243 KEMFLKLTKKSVISWNVMIAMYVN-NSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGD 301

Query: 307 LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNE 366
           L A  LG  VH    ++    ++ L+ AL++ Y KC  +  A  +F+++    D + W  
Sbjct: 302 LSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQ-FRDVVSWTS 360

Query: 367 IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
           II    +  +  +A+ +F EM+ S     S   V +L AC+  G   +G+     + +  
Sbjct: 361 IISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECG 420

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           +   L    C++ +  R  K++ A      M  + +   W  ++S+
Sbjct: 421 ITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
            At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/754 (31%), Positives = 401/754 (53%), Gaps = 106/754 (14%)

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
             SS+KA+ +T++K      ++ +  + KQ+H   +++   S+ S  + +IS+Y+    L 
Sbjct: 1    MSSSKALIKTLIK---NPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLH 56

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A  +F ++K   + +W S+I  +T         SLF+K  +S ++              
Sbjct: 57   EALLLFKTLKSPPVLAWKSVIRCFTD-------QSLFSKALASFVE-------------- 95

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                          M++ G  P+ +    VL++ T +  L++G   HG+I+R G+D DLY
Sbjct: 96   --------------MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141

Query: 569  VGTSLMDMYVK-------------------------------NDCL-----QNAQEVFDN 592
             G +LM+MY K                                 C+      + + VF+ 
Sbjct: 142  TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
            M  +++V++N++I+GY   G++ +A +M+ +M   ++KPD  + +S++  +S +    + 
Sbjct: 202  MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261

Query: 653  LVIIHHMKNSGIYPNV-------------------------------VTWTSLISGSLQN 681
              I  ++   GI  +V                               ++W SL++G +QN
Sbjct: 262  KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
              Y E+L+ F QM    +KP +   SS++  C  L  L  GK++H   L+ GF  + ++A
Sbjct: 322  GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            + L+DMYSK GN+K+AR++F +       SW  +IMG A++G+G EA+ LF E+   G +
Sbjct: 382  SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+ + F A+L AC + GLV+E W YF+SM+  Y +   +EHY+ + DLLG+AG L+EA++
Sbjct: 442  PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            FI  M  +P  ++W  LL SC +H +LE AE  + ++F ++  N   Y LM N+ A + R
Sbjct: 502  FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            W+++ +LR  M + G++     SWI++    H F +    HP+  +I   L  ++ +M+K
Sbjct: 562  WKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
             GYV DT  V  D+DEE K ++L  H+E+LA+ +G++ T+    IRV KN R+C+DCH A
Sbjct: 622  EGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVA 681

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             K++S +  REI +RD +RFHHF  G CSC D W
Sbjct: 682  IKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/496 (22%), Positives = 231/496 (46%), Gaps = 56/496 (11%)

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           L W  +I        +  A+  F EM+ S           +L++C  +     G+ +HG+
Sbjct: 71  LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130

Query: 422 VLKSALESNLSVCNCLISMYSR----NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +++  ++ +L   N L++MY++     +K+ +   VFD M     +S +  + + T +  
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN-VFDEMPQRTSNSGDEDVKAETCIMP 189

Query: 478 --VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
             +D    +F  M     + D++++N +++G+   G Y++ L ++R M +   +P+  ++
Sbjct: 190 FGIDSVRRVFEVMP----RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           S VL   +E   +  G+E HGY++R G+D D+Y+G+SL+DMY K+  +++++ VF  +  
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS----------------- 638
           R+ ++WNSL++GY   G +  A ++  QM   ++KP  V+++S                 
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365

Query: 639 ------------------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                             LV  YS  G  K A  I   M       + V+WT++I G   
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN----VLDEVSWTAIIMGHAL 421

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAY 739
           + +  E++  F +M+++ +KPN     ++L  C  +GL+       + +    G  ++  
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481

Query: 740 VATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
               + D+  ++G L+ A     K     T + W+ ++   +++ N    + L  ++ E 
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN----LELAEKVAEK 537

Query: 799 GFQPDAITFTALLAAC 814
            F  D+    A +  C
Sbjct: 538 IFTVDSENMGAYVLMC 553



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 215/467 (46%), Gaps = 76/467 (16%)

Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC- 342
           E+   G      +   +LK CT +M    G  VH  +++ G D D++   ALMN Y K  
Sbjct: 95  EMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLL 154

Query: 343 ------------------------RDV-----------ESANKLFSEVSDLEDDLLWNEI 367
                                    DV           +S  ++F EV   +D + +N I
Sbjct: 155 GMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF-EVMPRKDVVSYNTI 213

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I    ++  +E+A+++ REM  +  K  S T+  +L   ++     +GK+IHGYV++  +
Sbjct: 214 IAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGI 273

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           +S++ + + L+ MY+++ ++E + RVF  +   +  SWNS+++ Y   G  + A  LF +
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ 333

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M +++++P  + +                                   S V+ A   L  
Sbjct: 334 MVTAKVKPGAVAF-----------------------------------SSVIPACAHLAT 358

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L  G++ HGY+LR G   ++++ ++L+DMY K   ++ A+++FD M   + V+W ++I G
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYP 666
           +   G    A  +  +M+ + +KP+ V++ ++++  S  G   EA    + M K  G+  
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +  + ++     +     E+  F  +M    ++P  +  S+LL +C
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMC---VEPTGSVWSTLLSSC 522



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 140/269 (52%), Gaps = 3/269 (1%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           + FG   S  + F +   +    +++ +  Y    G  ++ L +  E+    +   S  L
Sbjct: 188 MPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQ-SGMYEDALRMVREMGTTDLKPDSFTL 245

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           + +L + ++ +    G E+H  +I++G D DV++  +L++ Y K   +E + ++FS +  
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY- 304

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
             D + WN ++   ++N ++  A++LFR+M  +  K  +     ++ ACA +   H GKQ
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +HGYVL+    SN+ + + L+ MYS+   ++ A ++FD M   +  SW ++I  +   G+
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
              A SLF +M    ++P+ + +  +L+ 
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 15/268 (5%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H  +I+ G   +SD  +  SL+  Y +      + + F   + R    W+S +  Y 
Sbjct: 262 KEIHGYVIRKG--IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G   E L ++ ++    V   +   + ++  C  L    LG ++H  +++ GF  ++
Sbjct: 320 Q-NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  AL++ Y KC ++++A K+F  ++ L D++ W  IIM    +     A+ LF EM+ 
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRN 444
              K      V +L AC+ VG   E           Y L   LE   +V + L     R 
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL----GRA 493

Query: 445 NKLELATRVFDSM-KDHNLSSWNSMISS 471
            KLE A      M  +   S W++++SS
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSS 521


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/807 (32%), Positives = 414/807 (51%), Gaps = 100/807 (12%)

Query: 334  ALMNFYGKCRDVESANKLFSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  Y +C D+++A  LF+    DL D + +N +I       +W +A+   R+M  +  
Sbjct: 90   ALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDM-LADH 148

Query: 393  KAISRTIVKMLQACAKVG--AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
            +  S T+V +L AC+ +       G++ H + LK                          
Sbjct: 149  EVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLD--------------------- 187

Query: 451  TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
                   K      +N+++S Y  LG VD A  LF   +S     D++TWN ++S     
Sbjct: 188  -------KGRERFPFNALLSMYARLGLVDDAQRLF--FSSGAGVGDLVTWNTMISLLVQG 238

Query: 511  GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYV 569
            G  +  + +L  M +LG RP+G + +  L A + L LL  GRE H ++L++  L  + +V
Sbjct: 239  GRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFV 298

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMK--NRNIVAWNSLISGYC-FKGLFVNAKKMLNQMEE 626
             ++L+DMY  N+ + +A+ VFD +    R +  WN++I GY    G+   A ++ ++ME 
Sbjct: 299  ASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEA 358

Query: 627  EE--------------------------------IKPDLVS----WNSLVSGYSIWGQSK 650
            E                                 +K D+ S     N+L+  Y+  G+  
Sbjct: 359  EAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMD 418

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ--------------- 695
            EA  I   +       ++V+W +LI+G +      E+ +   +MQ               
Sbjct: 419  EAHTIFAMID----LRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGD 474

Query: 696  -----QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
                  +   PN+ T+ +LL  C  L     GKEIH   +++    D  V + L+DMY+K
Sbjct: 475  DTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAK 534

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFTA 809
             G L  AR VF +   + + +WN +IM + ++G G EA+ LF  ++  G   P+ +TF A
Sbjct: 535  CGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIA 594

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM-PF 868
             LAAC +SGLV+ G + F  M  DY   PT   ++C+VD+LG+AG LDEA+  I +M P 
Sbjct: 595  ALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPG 654

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            +   + W  +LG+CR+H +++   IA+ RLF+LEP  +++Y L+ N+ + +  WE+   +
Sbjct: 655  EHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEV 714

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R  M + GV      SWI++D  +H F A  + HP + +++  +  L   M++ GYVPDT
Sbjct: 715  RGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDT 774

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
             CV  D+DE EK  +L  H+EKLAI +GL++    A IRV KN RVC+DCH AAK++S +
Sbjct: 775  SCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRM 834

Query: 1049 RGREIFLRDGARFHHFREGECSCNDCW 1075
             GREI LRD  RFHHFR+G CSC D W
Sbjct: 835  VGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 191/405 (47%), Gaps = 27/405 (6%)

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH- 330
           GG  +E ++V  ++   GV          L  C++L    +G EVHA ++K   D D+  
Sbjct: 238 GGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLK---DDDLAA 294

Query: 331 ---LKCALMNFYGKCRDVESANKLFSEVSDLEDDL-LWNEIIMVKLRNEKW-ENAIKLFR 385
              +  AL++ Y     V  A ++F  V +    L +WN +I    ++    E AI+LF 
Sbjct: 295 NSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFS 354

Query: 386 EMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            M+  +  A S  T+  +L ACA+   F   + +HGYV+K  + SN  V N L+ MY+R 
Sbjct: 355 RMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARL 414

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            +++ A  +F  +   ++ SWN++I+     G +  A+ L  +M   ++     +   +L
Sbjct: 415 GRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREM---QLPSSAASGETML 471

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
            G  T    Q  +            PN  ++  +L     L     G+E HGY +R+ L+
Sbjct: 472 EGDDTSVDGQRCM------------PNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALE 519

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            DL VG++L+DMY K  CL  A+ VFD +  RN++ WN LI  Y   GL   A  + ++M
Sbjct: 520 SDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRM 579

Query: 625 -EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPN 667
               E  P+ V++ + ++  S  G     L +   MK   G  P 
Sbjct: 580 VANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPT 624



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 164/359 (45%), Gaps = 26/359 (7%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLY--FS 255
           L   ++   L   +  HA ++K   +  +  +  +L+  Y      + A + F +     
Sbjct: 267 LPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHG 326

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGK-GVIFRSRILTIILKLCTKLMAFWLGV 314
           R    W++ +  Y   GG  +E +E++  +  + G       +  +L  C +   F    
Sbjct: 327 RQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKE 386

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            VH  ++KR    +  ++ ALM+ Y +   ++ A+ +F+ + DL D + WN +I   +  
Sbjct: 387 AVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMI-DLRDIVSWNTLITGCIVQ 445

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVK--------------------MLQACAKVGAFHE 414
                A +L REMQ  S+ A   T+++                    +L  CA + A   
Sbjct: 446 GLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPAR 505

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           GK+IHGY ++ ALES+L+V + L+ MY++   L LA  VFD +   N+ +WN +I +Y  
Sbjct: 506 GKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGM 565

Query: 475 LGYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPN 531
            G  D A +LF++M  +    P+ +T+   L+     G     L L +GM +  GF P 
Sbjct: 566 HGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPT 624


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 258/796 (32%), Positives = 413/796 (51%), Gaps = 74/796 (9%)

Query: 317  HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
            H +++K GFD D+ L   L+N Y +  D  SA KLF E+ D  + + W  +I    +N  
Sbjct: 23   HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPD-RNGVTWACLISGYTQNGM 81

Query: 377  WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH-EGKQIHGYVLKSAL-ESNLSVC 434
             E+A  + +EM F             ++AC +   +  +G+Q+HGY +++ L ++ ++V 
Sbjct: 82   PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N LI+MY++                                G +D A S+F  M    + 
Sbjct: 142  NGLINMYAK-------------------------------CGDIDHARSVFGLM----VD 166

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D ++WN +++G   +  +++ +     M+  G  P+  ++   L +   L  +  G+++
Sbjct: 167  KDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQT 226

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            HG  ++ GLD D+ V  +L+ +Y +   L   Q+VF  M  R+ V+WN++I      G  
Sbjct: 227  HGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGAS 286

Query: 615  VN-AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK-----EALVIIHHMKNSGIYPNV 668
            V+ A ++  +M      P+ V++ +L++  S    SK      AL++ +++K+     N 
Sbjct: 287  VSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENA 346

Query: 669  ---------------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
                                       V+W S+ISG + NE   +++     M Q   + 
Sbjct: 347  LLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRL 406

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +  T +++L  C  +  L+ G E+H   ++     D  + + L+DMYSK G +  A   F
Sbjct: 407  DCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFF 466

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                 + L SWN MI G+A +G+G  A+ LF  +  +G  PD ITF  +L+AC + GLV+
Sbjct: 467  NLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVD 526

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            EG++YF SM+  Y ++P +EHYSCMVDLLG+AG LD+  +FI  MP KP+  IW  +LG+
Sbjct: 527  EGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGA 586

Query: 882  -CRIHGH-LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             CR +G   E    A+  LF ++P N+ NY L+ N+ A   +WED+ R R +M E  VK 
Sbjct: 587  CCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKK 646

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
                SW+ +   VHVF A    HP  G IY +L  L  +++  GYVP  +    D++ E 
Sbjct: 647  EAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPEN 706

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K ++L  H+EKLA+ + L +  S  PIR++KN RVC DCH+A KY+S V  R I LRD  
Sbjct: 707  KEELLSYHSEKLAVAFVLTRN-SGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSN 765

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF +G+CSC D W
Sbjct: 766  RFHHFEDGKCSCRDYW 781



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 143/619 (23%), Positives = 260/619 (42%), Gaps = 86/619 (13%)

Query: 214 HAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  ++K G  ++SD  +  +LI  Y+  GD  SA K F     R+   W+  +  Y    
Sbjct: 23  HLNVLKHG--FDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ-N 79

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWL--GVEVHASLIKRGF-DFDV 329
           G  ++   V  E+  +G +         ++ C + M  W   G +VH   I+ G  D  V
Sbjct: 80  GMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESM-LWRRKGRQVHGYAIRTGLNDAKV 138

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +   L+N Y KC D++ A  +F  + D +D + WN +I    +N+ +E+A+K +  M+ 
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLMVD-KDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           +     +  ++  L +CA +G    G+Q HG  +K  L+ ++SV N L+++Y+  ++L  
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAE 257

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
             +VF  M + +  SWN++I +    G                                 
Sbjct: 258 CQKVFSWMLERDQVSWNTVIGALADSG--------------------------------- 284

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
             S    + +   M   G+ PN  +   +L  V+ L   K   + H  IL+  +  D  +
Sbjct: 285 -ASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAI 343

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
             +L+  Y K+  ++N +E+F  M + R+ V+WNS+ISGY    L   A  ++  M +  
Sbjct: 344 ENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRG 403

Query: 629 -----------------------------------IKPDLVSWNSLVSGYSIWGQSKEAL 653
                                              ++ D+V  ++LV  YS  G+   A 
Sbjct: 404 QRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYAS 463

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
              + M    +Y    +W S+ISG  ++ +   +L+ F +M+     P+  T   +L  C
Sbjct: 464 RFFNLMPVRNLY----SWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSAC 519

Query: 714 GGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLAS 771
             +GL+  G E    +    G +      + ++D+  ++G L        K   K  +  
Sbjct: 520 SHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILI 579

Query: 772 WNCMIMGFAIYGNGKEAIL 790
           W   ++G    GNG++  L
Sbjct: 580 WR-TVLGACCRGNGRKTEL 597



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 209/498 (41%), Gaps = 16/498 (3%)

Query: 153 TSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKS 212
           T ++QN+         NS     L P++     A  SC S G           C+   + 
Sbjct: 177 TGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLG-----------CILLGQQ 225

Query: 213 KHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            H + IK+G   +   +  +L+  Y E        K F     R    W++ +      G
Sbjct: 226 THGEGIKLGLDMDVS-VSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSG 284

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             V E +EV+ E+   G          +L   + L    L  ++HA ++K     D  ++
Sbjct: 285 ASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIE 344

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  YGK  ++E+  ++FS +S+  D++ WN +I   + NE    A+ L   M     
Sbjct: 345 NALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQ 404

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +    T   +L ACA V     G ++H   +++ LES++ + + L+ MYS+  +++ A+R
Sbjct: 405 RLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASR 464

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            F+ M   NL SWNSMIS Y   G+ D A  LF +M  S   PD IT+  +LS     G 
Sbjct: 465 FFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGL 524

Query: 513 YQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRE--SHGYILRNGLDYDLYV 569
                   + M  + G  P     S ++  +     L       +   I  N L +   +
Sbjct: 525 VDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVL 584

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           G        K +  + A E+  NM  +N V +  L + Y   G + +  +    M E  +
Sbjct: 585 GACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAV 644

Query: 630 KPDL-VSWNSLVSGYSIW 646
           K +   SW ++  G  ++
Sbjct: 645 KKEAGCSWVTMKDGVHVF 662


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/809 (32%), Positives = 416/809 (51%), Gaps = 72/809 (8%)

Query: 296  ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR--DVESANKLFS 353
            IL   L+ C  +  F    ++ + +I  GF  D      L+ F  +    ++  + ++FS
Sbjct: 28   ILETHLQKCQNIKQF---NQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFS 84

Query: 354  EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
             + +  +  + N ++   ++      AI +++ M  S+  A + T   + Q+C+   A  
Sbjct: 85   HIEN-PNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEF 143

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            +GK I  +VLK   +S++ + N LI+MY+    L  A +VFD     ++ SWNSM++ Y 
Sbjct: 144  DGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYV 203

Query: 474  GLGYVDVAWSLFNKMNSSRI---------------------------QPDIITWNCLLSG 506
             +G V+ A  ++++M    +                           Q D+++W+ L+S 
Sbjct: 204  LVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISC 263

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            +  +  Y+  L L + M + G   +   V  VL A + L ++  G+  HG +++ G++  
Sbjct: 264  YEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETY 323

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            + +  +L+ MY   + +  AQ++F                                    
Sbjct: 324  VNLQNALIHMYSSCEEVVTAQKLFS----------------------------------- 348

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
            E    D +SWNS++SGY   G+ ++A  +   M +     + V+W+++ISG  Q + + E
Sbjct: 349  ESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDK----DNVSWSAMISGYAQQDRFTE 404

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +L  F +MQ E  KP+ T + S++  C  L  L  GK IH    KNG   +  + T LI+
Sbjct: 405  TLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLIN 464

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY K G ++ A EVF+    K +++WN +I+G A+ G   +++  F E+ E G  P+ IT
Sbjct: 465  MYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEIT 524

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F A+L AC++ GLV+EG ++F+SM  ++ I P I+HY CMVDLLG+AG L EA + I +M
Sbjct: 525  FVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESM 584

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            P  PD + WGALLG+C+ +G  E  E   R+L +L P +     L+ N+ A    W DV 
Sbjct: 585  PMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVL 644

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
             +R  M + GV      S I+    VH F A    HP    I   L  +  ++K  GY P
Sbjct: 645  EVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAP 704

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            DTR V  DIDEEEK   L  H+EKLAI +GL+      PIR++KN R+C+DCHTAAK +S
Sbjct: 705  DTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLIS 764

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
                REI +RD  RFHHF++G CSC D W
Sbjct: 765  KAFNREIVVRDRHRFHHFKQGSCSCMDYW 793



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 145/305 (47%), Gaps = 31/305 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S+I  + + G+   A K F     +    WS+ +  YE      +E L ++ E++  G++
Sbjct: 228 SMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQ-NEMYEEALILFKEMNANGIM 286

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
               ++  +L  C++L+    G  VH  ++K G +  V+L+ AL++ Y  C +V +A KL
Sbjct: 287 VDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKL 346

Query: 352 FSEVSDLE------------------------------DDLLWNEIIMVKLRNEKWENAI 381
           FSE   L+                              D++ W+ +I    + +++   +
Sbjct: 347 FSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETL 406

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            LF+EMQ    K     +V ++ AC  + A  +GK IH Y+ K+ L+ N+ +   LI+MY
Sbjct: 407 VLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMY 466

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            +   +E A  VF  +++  +S+WN++I      G VD +   F++M    + P+ IT+ 
Sbjct: 467 MKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFV 526

Query: 502 CLLSG 506
            +L  
Sbjct: 527 AVLGA 531


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/901 (28%), Positives = 439/901 (48%), Gaps = 77/901 (8%)

Query: 210  VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
            V+  HA+++  G + +S  +   LI  Y   G    A + F     + ++ W + +    
Sbjct: 206  VEQIHARILYQG-LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264

Query: 270  SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
                E  E + ++ +++  G++      + +L  C K+ +  +G ++H  ++K GF  D 
Sbjct: 265  KNECEA-EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            ++  AL++ Y    ++ SA  +FS +S   D + +N +I    +    E A++LF+ M  
Sbjct: 324  YVCNALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               +  S T+  ++ AC+  G    G+Q+H Y  K    SN  +   L+++Y++   +E 
Sbjct: 383  DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A   F   +  N+  WN M+          VA+ L + +                     
Sbjct: 443  ALDYFLETEVENVVLWNVML----------VAYGLLDDL--------------------- 471

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                +N   + R MQ     PN  +   +L+    L  L+ G + H  I++     + YV
Sbjct: 472  ----RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             + L+DMY K   L  A ++      +++V+W ++I+GY        A     QM +  I
Sbjct: 528  CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587

Query: 630  KPDLVSW-----------------------------------NSLVSGYSIWGQSKEALV 654
            + D V                                     N+LV+ YS  G+ +E+ +
Sbjct: 588  RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
                 +      + + W +L+SG  Q+ N  E+L+ F++M +E I  N+ T  S ++   
Sbjct: 648  AFEQTEAG----DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
                ++ GK++H +  K G+  +  V   LI MY+K G++  A + F + + K   SWN 
Sbjct: 704  ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            +I  ++ +G G EA+  F +++ +  +P+ +T   +L+AC + GLV++G  YF+SM+++Y
Sbjct: 764  IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             + P  EHY C+VD+L +AG L  A +FI+ MP KPDA +W  LL +C +H ++E  E A
Sbjct: 824  GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            +  L +LEP +SA Y L+ NL A+S +W+  +  R  M E GVK     SWI++   +H 
Sbjct: 884  AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP   EI+     L     ++GYV D   +  ++  E+K  ++  H+EKLAI 
Sbjct: 944  FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 1003

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +GL+   +  PI V+KN RVC+DCH   K++S V  REI +RD  RFHHF  G CSC D 
Sbjct: 1004 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063

Query: 1075 W 1075
            W
Sbjct: 1064 W 1064



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 180/669 (26%), Positives = 297/669 (44%), Gaps = 79/669 (11%)

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLM-AFWLGVE 315
           S+A  S ++ + ESF  +  + +E       +G+    + L  +L+ C K   +   G +
Sbjct: 53  SFAAISVYISEDESFQEKRIDSVE------NRGIRPNHQTLKWLLEGCLKTNGSLDEGRK 106

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H+ ++K G D +  L   L +FY    D+  A K+F E+ +      WN++I       
Sbjct: 107 LHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPE-RTIFTWNKMIKELASRN 165

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQAC-AKVGAFHEGKQIHGYVLKSALESNLSVC 434
                  LF  M   +      T   +L+AC     AF   +QIH  +L   L  +  VC
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI +YSRN  ++LA RVFD ++  + SSW +MIS                 ++ +  +
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG----------------LSKNECE 269

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            + I   C                    M  LG  P   + S VL A  ++  L+ G + 
Sbjct: 270 AEAIRLFC-------------------DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           HG +L+ G   D YV  +L+ +Y     L +A+ +F NM  R+ V +N+LI+G    G  
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLV-----SGYSIWGQSKEALVI-IHHMKNSGI---- 664
             A ++  +M  + ++PD  +  SLV      G    GQ   A    +    N+ I    
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430

Query: 665 ---------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                                  NVV W  ++      ++ R S + F QMQ E+I PN 
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            T  S+L+TC  LG L+ G++IH   +K  F  +AYV + LIDMY+K G L +A ++  +
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
            A K + SW  MI G+  Y    +A+  F ++L+ G + D +  T  ++AC     ++EG
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW-DFIRTMPFKPDATIWGALLGSC 882
            +   + +        +   + +V L  + G ++E++  F +T     D   W AL+   
Sbjct: 611 -QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA--GDNIAWNALVSGF 667

Query: 883 RIHGHLEYA 891
           +  G+ E A
Sbjct: 668 QQSGNNEEA 676


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 272/915 (29%), Positives = 438/915 (47%), Gaps = 80/915 (8%)

Query: 198  LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRS 257
            LN    FR L      HA  ++ G   N+  +  +L+  Y + G    A   F     ++
Sbjct: 65   LNSCGSFRELRDGILVHALSLERGFFQNTL-VATALLNMYGKCGTLLDAQSVFEEMAEKN 123

Query: 258  YADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLGVE 315
               W++ L  Y   G   +  +E++  +  +GV  ++ ++T   +L       A   G  
Sbjct: 124  VVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGV--KANVITFLNVLNSVVDPDALRKGKF 181

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +H+ + +     DV +  AL+N Y KC  +  A K+F  +        WN +I     +E
Sbjct: 182  IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP-CRSVGTWNSMISAYSISE 240

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +   A  +F+ MQ    +    T + +L AC        GK +   + +++ E +L V  
Sbjct: 241  RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             LI+MY+R    E A +VF  MK  NL                                 
Sbjct: 301  ALITMYARCRSPEDAAQVFGRMKQTNL--------------------------------- 327

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
              ITW+ +++    HG     L   R MQ  G  PN  +   +L   T    L+     H
Sbjct: 328  --ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIH 385

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
              I  +GLD    +  +L+++Y + +   +A+ VFD ++  N+++WNS+I  Y       
Sbjct: 386  LLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHD 445

Query: 616  NAKKMLNQMEEEEIKPDLVSW-----------------------------------NSLV 640
            +A ++   M+++ I+PD V++                                    SLV
Sbjct: 446  DALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLV 505

Query: 641  SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
            + Y+  G+   A VI+  M        +  W  LI+G   +   RE+L+ + ++Q E I 
Sbjct: 506  NMYAKAGELDVAEVILQEMDEQ----QITAWNVLINGYALHGRSREALEAYQKLQLEAIP 561

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
             +  T  S+L  C     L  GK IH   ++ G   D  V   L +MYSK G++++AR +
Sbjct: 562  VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 621

Query: 761  FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
            F     ++  SWN M+  +A +G  +E + L  ++ + G + + ITF ++L++C ++GL+
Sbjct: 622  FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 681

Query: 821  EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
             EG +YF S+  D  I    EHY C+VDLLG+AG L EA  +I  MP +P    W +LLG
Sbjct: 682  AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLG 741

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
            +CR+   L+  ++A+ +L +L+P NS+   ++ N+ +    W++  +LR +M    VK V
Sbjct: 742  ACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKV 801

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
               S IQ+   VH F      HP   EIY ++  L   M++ GYVPDT+ V  D+DEE+K
Sbjct: 802  PGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQK 861

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
              +L  H+EKLAI +GL+ T   + + + KN RVC DCHTA K++S + GREI +RD  R
Sbjct: 862  ESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHR 921

Query: 1061 FHHFREGECSCNDCW 1075
            FHHFR+G CSC D W
Sbjct: 922  FHHFRDGSCSCKDYW 936



 Score =  236 bits (603), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 174/685 (25%), Positives = 317/685 (46%), Gaps = 71/685 (10%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y   G    A  AF    +R+   W+  +  Y S+    QE L ++  +  +GV   +  
Sbjct: 2   YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKS-FQEALALFHAMLLEGVAPNAIT 60

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +L  C        G+ VHA  ++RGF  +  +  AL+N YGKC  +  A  +F E++
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 357 DLEDDLLWNEIIMV-KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
           + ++ + WN ++ V  L+   W+ A++LF  M     KA   T + +L +     A  +G
Sbjct: 121 E-KNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           K IH  V +S    ++ V   L++ Y++   L  A +VFD M   ++ +WNSMIS+Y+  
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                A+ +F +M     + D +T+   LS                              
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTF---LS------------------------------ 266

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
             +L A      L++G+     I     + DL+VGT+L+ MY +    ++A +VF  MK 
Sbjct: 267 --ILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQ 324

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA--- 652
            N++ W+++I+ +   G    A +    M++E I P+ V++ SL++G++     +E    
Sbjct: 325 TNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI 384

Query: 653 -LVIIHH-------MKNS--GIY------------------PNVVTWTSLISGSLQNENY 684
            L+I  H       M+N+   +Y                  PN+++W S+I   +Q E +
Sbjct: 385 HLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERH 444

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
            ++L+ F  MQQ+ I+P+     ++L  C      +  K +H    ++G      V T L
Sbjct: 445 DDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSL 504

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           ++MY+K+G L  A  + ++   + + +WN +I G+A++G  +EA+  + +L       D 
Sbjct: 505 VNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDK 564

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
           +TF ++L AC +S  + EG K   S + +  +   +   + + ++  K G ++ A     
Sbjct: 565 VTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFD 623

Query: 865 TMPFKPDATIWGALLGSCRIHGHLE 889
           +MP +  A  W  +L +   HG  E
Sbjct: 624 SMPIR-SAVSWNGMLQAYAQHGESE 647



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 157/345 (45%), Gaps = 36/345 (10%)

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           MY +   L +A   F  ++ RN+V+WN +IS Y     F  A  + + M  E + P+ ++
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSGIY------------------------------ 665
             ++++    + + ++ +++       G +                              
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 666 -PNVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             NVVTW +++   SLQ   ++ +++ F +M  E +K N  T  ++L +      L+ GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            IH    ++    D +V T L++ Y+K G+L  AR+VF     +++ +WN MI  ++I  
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS-TDYNIIPTIEH 842
              EA  +F  + + G + D +TF ++L AC N   ++ G    +S+S T + +   +  
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG- 299

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            + ++ +  +    ++A      M  + +   W A++ +   HGH
Sbjct: 300 -TALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGH 342


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
            mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/650 (35%), Positives = 363/650 (55%), Gaps = 56/650 (8%)

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL-GYVDVAWSLFNK 487
            SN+   N +I+ + R+  L  A RVF+SM      +WNSM++ Y+   G + VA  LF++
Sbjct: 3    SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            +     +PDI ++N +L+ +  +   ++       M      P   + S           
Sbjct: 63   IP----EPDIFSYNIMLACYLHNADVESARLFFDQM------PVKDTAS----------- 101

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
                                    +++  + +N  +  A+E+F  M  RN V+WN++ISG
Sbjct: 102  ----------------------WNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISG 139

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKP--DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
            Y   G    AK++       E+ P   +V+W ++++G+  +G+ + A      M      
Sbjct: 140  YVESGDLDLAKQLF------EVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMP----M 189

Query: 666  PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             N+VTW ++I+G ++N      LK F +M +   +PN +++SS+L  C  L  L+ GK++
Sbjct: 190  KNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQV 249

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            H L  K+    +    T L+ MY K G+L+ A ++F     K + +WN MI G+A +G G
Sbjct: 250  HQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAG 309

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            ++A+ LF ++ + G +PD ITF A+L+AC ++G V+ G +YF+SM  DY +    +HY+C
Sbjct: 310  EKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTC 369

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            +VDLLG+ G L EA D I+ MPFKP + I+G LLG+CRIH +LE AE A++ L  L+P +
Sbjct: 370  VVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPES 429

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            +A Y  + N+ A  NRW+ V  +R SM +  V     +SWI++  +VH F +    HP  
Sbjct: 430  AAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPEL 489

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
              I+ +L  L  +M+  GYVPD      D+ EE+K ++LL H+EKLAI YGL++     P
Sbjct: 490  AFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTP 549

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IRV KN RVC DCH+A KY+S + GR I +RD  RFHHFR+GECSC D W
Sbjct: 550  IRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/482 (22%), Positives = 212/482 (43%), Gaps = 87/482 (18%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I +++  GD  SA + F     ++   W+S L  Y +  G+++   +++  +    +  
Sbjct: 11  VITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDI-- 68

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
                                           F +++ L C L N      DVESA +LF
Sbjct: 69  --------------------------------FSYNIMLACYLHN-----ADVESA-RLF 90

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            +   ++D   WN +I    +N   + A +LF  M   ++ +                  
Sbjct: 91  FDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVS------------------ 132

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
                                 N +IS Y  +  L+LA ++F+     ++ +W +MI+ +
Sbjct: 133 ---------------------WNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGF 171

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              G +++A   F +M       +++TWN +++G+  +   +N L L + M   GFRPN 
Sbjct: 172 MKFGKIELAEKYFEEMP----MKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNP 227

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
           SS+S VL   + L  LK G++ H  I ++ + +++  GTSL+ MY K   L++A ++F  
Sbjct: 228 SSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLV 287

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           M  +++V WN++ISGY   G    A  + ++M +E +KPD +++ +++S  +  G     
Sbjct: 288 MPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLG 347

Query: 653 LVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           +   + M ++ G+      +T ++    +     E++    +M     KP+S    +LL 
Sbjct: 348 IEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMP---FKPHSAIFGTLLG 404

Query: 712 TC 713
            C
Sbjct: 405 AC 406



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 3/227 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  +++FG    A K F     ++   W++ +  Y     + +  L+++  +   G  
Sbjct: 166 AMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIE-NCQAENGLKLFKRMVESGFR 224

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L+ +L  C+ L A  LG +VH  + K    +++    +L++ Y KC D+E A KL
Sbjct: 225 PNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKL 284

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  V   +D + WN +I    ++   E A+ LF +M+    K    T V +L AC   G 
Sbjct: 285 FL-VMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGF 343

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
              G +    +++   +E+      C++ +  R  KL  A  +   M
Sbjct: 344 VDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM 390


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
            chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/900 (29%), Positives = 447/900 (49%), Gaps = 95/900 (10%)

Query: 214  HAQMIKMGKIWNSDDMVKS--LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
            H+ +IKMG     +DM  S  L+  Y +      A + F     R  A W+  +  Y   
Sbjct: 38   HSPIIKMGF---QEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKI 94

Query: 272  GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
            G   +E LE++  +   G       L+  L+ C+ L  F  G    A + K GFD +  L
Sbjct: 95   GNH-EEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVL 153

Query: 332  KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
              AL++FY KC   + A ++F  +++  D + W  ++   +    W  A++L+  M  + 
Sbjct: 154  GSALIDFYSKCGCTQEAYRVFEYMNN-GDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTG 212

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                  T VK+L A + +G  + GK +H +++   +E NL +   L+ MY +   +E A 
Sbjct: 213  VAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAV 271

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
            +V                                +K+    ++ D+  W  ++SG     
Sbjct: 272  KV--------------------------------SKLT---LEYDVFLWTAIISGFTQSL 296

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
             ++  +T    M++ G  PN  + S +L A + +  L  G++ H  ++  GL+ D+ VG 
Sbjct: 297  KFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGN 356

Query: 572  SLMDMYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            SL+DMY+K ++ +++A   F  + + N+++W SLI+G+   GL   + K+   M+   ++
Sbjct: 357  SLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVR 416

Query: 631  P-----------------------------------DLVSWNSLVSGYSIWGQSKEALVI 655
            P                                   D+V  N+LV  Y+  G   +A  +
Sbjct: 417  PNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHV 476

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
               MK    + +V+T+TSL +   Q  N+  +L     M ++D++ +  +++S L    G
Sbjct: 477  TSMMK----HRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAG 532

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            + +++ GK++HC  +K+G      V+ GL+D+Y K G +  A   F +       SWN +
Sbjct: 533  IPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGL 592

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I G A  G+   A+  F ++   G +PD IT   +L AC + GLV+ G  YF SM   + 
Sbjct: 593  IFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHG 652

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P ++HY C+VDLLG+AG L+EA + I TMPFKPDA I+  LLG+C++HG++   E  +
Sbjct: 653  IRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMA 712

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            R+  +L+P + A Y L+ NL   S R E  E+ R  M E GV+     SW++   +VH+F
Sbjct: 713  RQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLF 772

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
            +A    HP  G+I+ ++  L+++ +  G        YQ+       + L  H+EKLA+ +
Sbjct: 773  TAGDTSHPQIGKIHEKIESLIAQFRNQGI------WYQE------NRALAHHSEKLAVAF 820

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ T  +APIR+IKN R+C DCH     ++ +  REI +RDG RFH F++GECSC   W
Sbjct: 821  GLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/626 (24%), Positives = 276/626 (44%), Gaps = 75/626 (11%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G+ +H+ +IK GF  D+ L   L++ YGKC  V  A +LF E+    D   W  ++    
Sbjct: 34  GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMP-CRDVASWTMLMSAYG 92

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +    E A++LF  M  S       T+   L++C+ +  F+ G +    V KS  +SN  
Sbjct: 93  KIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPV 152

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           + + LI  YS+    + A RVF+ M + ++ SW  M+SS+   G    A  L+++M  + 
Sbjct: 153 LGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTG 212

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           + P+  T+                                    V L A +    L YG+
Sbjct: 213 VAPNEFTF------------------------------------VKLLAASSFLGLNYGK 236

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H +++   ++ +L + T+L+DMY K   +++A +V       ++  W ++ISG+    
Sbjct: 237 LVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSL 296

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIHHMKNS----- 662
            F  A    ++ME   + P+  +++ +++  S       G+   + V++  ++N      
Sbjct: 297 KFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGN 356

Query: 663 ---------------------GIY-PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
                                GI  PNV++WTSLI+G  ++    ES+K F  MQ   ++
Sbjct: 357 SLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVR 416

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           PNS T+S++L  CG +  L   +++H   +KN    D  V   L+D Y+  G +  A  V
Sbjct: 417 PNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHV 476

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
                ++ + ++  +       GN + A+ +   + +   + D  +  + L+A     ++
Sbjct: 477 TSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIM 536

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW-DFIRTMPFKPDATIWGALL 879
           E G K     S    +   I   + +VDL GK G + +A   F+     +PDA  W  L+
Sbjct: 537 ETG-KQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEIT--EPDAVSWNGLI 593

Query: 880 GSCRIHGHLEYAEIA--SRRLFKLEP 903
                +GH+  A  A    RL  +EP
Sbjct: 594 FGLASNGHVSSALSAFEDMRLAGVEP 619



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 229/509 (44%), Gaps = 73/509 (14%)

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
           I  +++K + +     +  +G  IH  ++K   + ++ + N L+S+Y +   +  A ++F
Sbjct: 14  IEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLF 73

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D M   +++SW  ++S+Y  +G  + A  LF+ M              L+SG +      
Sbjct: 74  DEMPCRDVASWTMLMSAYGKIGNHEEALELFDSM--------------LISGEY------ 113

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                          PN  ++S  L++ + LR   +G      + ++G D +  +G++L+
Sbjct: 114 ---------------PNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALI 158

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           D Y K  C Q A  VF+ M N +IV+W  ++S +   G +  A ++ ++M +  + P+  
Sbjct: 159 DFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEF 218

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHM------------------------------KNSGI 664
           ++  L++  S  G +   LV  H M                                  +
Sbjct: 219 TFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTL 278

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
             +V  WT++ISG  Q+  +RE++  F +M+   + PN+ T S +L  C  +  L  GK+
Sbjct: 279 EYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQ 338

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNL-KSAREVFRKSANKTLASWNCMIMGFAIYG 783
           IH   +  G   D  V   L+DMY K  N+ + A   FR  A+  + SW  +I GF+ +G
Sbjct: 339 IHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHG 398

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK---YFDSMSTDYNIIPTI 840
             +E+I +F  +   G +P++ T + +L AC     + +  K   Y    + D +++   
Sbjct: 399 LEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVG- 457

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
              + +VD     G +D+AW     M  +
Sbjct: 458 ---NALVDAYAGLGMVDDAWHVTSMMKHR 483



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 2/163 (1%)

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           +++G  IH   +K GF +D +++  L+ +Y K   +  AR++F +   + +ASW  ++  
Sbjct: 31  VRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSA 90

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
           +   GN +EA+ LF  +L +G  P+  T +  L +C        G + F ++ T      
Sbjct: 91  YGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTR-FQALVTKSGFDS 149

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
                S ++D   K G   EA+     M    D   W  ++ S
Sbjct: 150 NPVLGSALIDFYSKCGCTQEAYRVFEYMN-NGDIVSWTMMVSS 191


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Glycine max]
          Length = 815

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/773 (31%), Positives = 407/773 (52%), Gaps = 76/773 (9%)

Query: 339  YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
            Y K  ++ +A  LF  +      + W  +I    ++ ++  A  LF +M          T
Sbjct: 83   YLKSGNLSTARSLFDSMVQ-RSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHIT 141

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
            +  +L    +  + +E  Q+HG+V+K   +S L VCN L+  Y +   L LA        
Sbjct: 142  LATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACH------ 195

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
                                     LF  M     + D +T+N LL+G+   G   + + 
Sbjct: 196  -------------------------LFKHM----AEKDNVTFNALLTGYSKEGFNHDAIN 226

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
            L   MQ LGFRP+  + + VL A  ++  +++G++ H ++++    ++++V  +L+D Y 
Sbjct: 227  LFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYS 286

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLIS--------------------------GYCFKG 612
            K+D +  A+++F  M   + +++N LI+                           + F  
Sbjct: 287  KHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFAT 346

Query: 613  LFVNAKKMLN-----QMEEEEIKPDLVS----WNSLVSGYSIWGQSKEALVIIHHMKNSG 663
            L   A   LN     Q+  + I  D +S     NSLV  Y+   +  EA  I   + +  
Sbjct: 347  LLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQS 406

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              P    WT+LISG +Q   + + LK F++M +  I  +S T +S+L+ C  L  L  GK
Sbjct: 407  SVP----WTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGK 462

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            ++H   +++G + + +  + L+DMY+K G++K A ++F++   +   SWN +I  +A  G
Sbjct: 463  QLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNG 522

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            +G  A+  F +++ +G QP++++F ++L AC + GLVEEG +YF+SM+  Y + P  EHY
Sbjct: 523  DGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHY 582

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            + MVD+L ++G  DEA   +  MPF+PD  +W ++L SCRIH + E A  A+ +LF ++ 
Sbjct: 583  ASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKG 642

Query: 904  C-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
              ++A Y  M N+ A +  W+ V +++ ++ E G++ V  +SW++I Q  HVFSA    H
Sbjct: 643  LRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSH 702

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P T EI  +L  L  +M++ GY PD+ C   ++DEE K + L  H+E++AI + L+ T  
Sbjct: 703  PQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPK 762

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +PI V+KN R C+DCH A K +S +  REI +RD +RFHHF +G CSC D W
Sbjct: 763  GSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 135/579 (23%), Positives = 254/579 (43%), Gaps = 58/579 (10%)

Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSA 246
           L+ + SGF       +F  ++ V   H  ++K+G  ++S  MV  SL+  Y +      A
Sbjct: 142 LATLLSGF------TEFESVNEVAQVHGHVVKVG--YDSTLMVCNSLLDSYCKTRSLGLA 193

Query: 247 AKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTK 306
              F     +    +++ L  Y   G    + + ++ ++   G          +L    +
Sbjct: 194 CHLFKHMAEKDNVTFNALLTGYSKEGFN-HDAINLFFKMQDLGFRPSEFTFAAVLTAGIQ 252

Query: 307 LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNE 366
           +     G +VH+ ++K  F ++V +  AL++FY K   +  A KLF E+ ++ D + +N 
Sbjct: 253 MDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEV-DGISYNV 311

Query: 367 IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
           +I     N + E +++LFRE+QF+           +L   A       G+QIH   + + 
Sbjct: 312 LITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTD 371

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
             S + V N L+ MY++ +K   A R+F  +   +   W ++IS Y   G  +    LF 
Sbjct: 372 AISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFV 431

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
           +M+ ++I  D  T+                                   + +L+A   L 
Sbjct: 432 EMHRAKIGADSATY-----------------------------------ASILRACANLA 456

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L  G++ H  I+R+G   +++ G++L+DMY K   ++ A ++F  M  RN V+WN+LIS
Sbjct: 457 SLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALIS 516

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIY 665
            Y   G   +A +   QM    ++P+ VS+ S++   S  G  +E L   + M     + 
Sbjct: 517 AYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLE 576

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P    + S++    ++  + E+ K   +M  E   P+    SS+L +C     +   +E+
Sbjct: 577 PRREHYASMVDMLCRSGRFDEAEKLMARMPFE---PDEIMWSSILNSC----RIHKNQEL 629

Query: 726 HCLCLKNGF----IKDAYVATGLIDMYSKSGNLKSAREV 760
                   F    ++DA     + ++Y+ +G   S  +V
Sbjct: 630 AIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKV 668



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 144/618 (23%), Positives = 261/618 (42%), Gaps = 82/618 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  YL+ G+ ++A   F     RS   W+  +  Y        E   ++ ++   G++
Sbjct: 78  TMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQH-NRFLEAFNLFADMCRHGMV 136

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  +L   T+  +     +VH  ++K G+D  + +  +L++ Y K R +  A  L
Sbjct: 137 PDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHL 196

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +++ +D++ +N ++    +     +AI LF +MQ    +    T   +L A  ++  
Sbjct: 197 FKHMAE-KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD 255

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+Q+H +V+K     N+ V N L+  YS+++++  A ++F  M + +  S+N +I+ 
Sbjct: 256 IEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC 315

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
               G V+ +  LF ++  +R       +  LLS         N L L  G Q       
Sbjct: 316 CAWNGRVEESLELFRELQFTRFDRRQFPFATLLS------IAANSLNLEMGRQI------ 363

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             S ++V  A++E                      + VG SL+DMY K D    A  +F 
Sbjct: 364 -HSQAIVTDAISE----------------------VLVGNSLVDMYAKCDKFGEANRIFA 400

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS------------- 638
           ++ +++ V W +LISGY  KGL  +  K+  +M   +I  D  ++ S             
Sbjct: 401 DLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTL 460

Query: 639 ----------------------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                                 LV  Y+  G  KEAL +   M       N V+W +LIS
Sbjct: 461 GKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMP----VRNSVSWNALIS 516

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH---CLCLKNG 733
              QN +   +L+ F QM    ++PNS +  S+L  C   GL++ G +         K  
Sbjct: 517 AYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLE 576

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
             ++ Y +  ++DM  +SG    A ++  R         W+ ++    I+ N + AI   
Sbjct: 577 PRREHYAS--MVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAA 634

Query: 793 HELLETGFQPDAITFTAL 810
            +L       DA  + ++
Sbjct: 635 DQLFNMKGLRDAAPYVSM 652


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/901 (28%), Positives = 439/901 (48%), Gaps = 77/901 (8%)

Query: 210  VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
            V+  HA+++  G + +S  +   LI  Y   G    A + F     + ++ W + +    
Sbjct: 166  VEQIHARILYQG-LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 224

Query: 270  SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
                E  E + ++ +++  G++      + +L  C K+ +  +G ++H  ++K GF  D 
Sbjct: 225  KNECEA-EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 283

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            ++  AL++ Y    ++ SA  +FS +S   D + +N +I    +    E A++LF+ M  
Sbjct: 284  YVCNALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHL 342

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               +  S T+  ++ AC+  G    G+Q+H Y  K    SN  +   L+++Y++   +E 
Sbjct: 343  DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 402

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A   F   +  N+  WN M+          VA+ L + +                     
Sbjct: 403  ALDYFLETEVENVVLWNVML----------VAYGLLDDL--------------------- 431

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                +N   + R MQ     PN  +   +L+    L  L+ G + H  I++     + YV
Sbjct: 432  ----RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 487

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             + L+DMY K   L  A ++      +++V+W ++I+GY        A     QM +  I
Sbjct: 488  CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 547

Query: 630  KPDLVSW-----------------------------------NSLVSGYSIWGQSKEALV 654
            + D V                                     N+LV+ YS  G+ +E+ +
Sbjct: 548  RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 607

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
                 +      + + W +L+SG  Q+ N  E+L+ F++M +E I  N+ T  S ++   
Sbjct: 608  AFEQTEAG----DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 663

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
                ++ GK++H +  K G+  +  V   LI MY+K G++  A + F + + K   SWN 
Sbjct: 664  ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 723

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            +I  ++ +G G EA+  F +++ +  +P+ +T   +L+AC + GLV++G  YF+SM+++Y
Sbjct: 724  IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 783

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             + P  EHY C+VD+L +AG L  A +FI+ MP KPDA +W  LL +C +H ++E  E A
Sbjct: 784  GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 843

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            +  L +LEP +SA Y L+ NL A+S +W+  +  R  M E GVK     SWI++   +H 
Sbjct: 844  AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 903

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP   EI+     L     ++GYV D   +  ++  E+K  ++  H+EKLAI 
Sbjct: 904  FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 963

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +GL+   +  PI V+KN RVC+DCH   K++S V  REI +RD  RFHHF  G CSC D 
Sbjct: 964  FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1023

Query: 1075 W 1075
            W
Sbjct: 1024 W 1024



 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 180/669 (26%), Positives = 297/669 (44%), Gaps = 79/669 (11%)

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLM-AFWLGVE 315
           S+A  S ++ + ESF  +  + +E       +G+    + L  +L+ C K   +   G +
Sbjct: 13  SFAAISVYISEDESFQEKRIDSVE------NRGIRPNHQTLKWLLEGCLKTNGSLDEGRK 66

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H+ ++K G D +  L   L +FY    D+  A K+F E+ +      WN++I       
Sbjct: 67  LHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPE-RTIFTWNKMIKELASRN 125

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQAC-AKVGAFHEGKQIHGYVLKSALESNLSVC 434
                  LF  M   +      T   +L+AC     AF   +QIH  +L   L  +  VC
Sbjct: 126 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 185

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI +YSRN  ++LA RVFD ++  + SSW +MIS                 ++ +  +
Sbjct: 186 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG----------------LSKNECE 229

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            + I   C                    M  LG  P   + S VL A  ++  L+ G + 
Sbjct: 230 AEAIRLFC-------------------DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 270

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           HG +L+ G   D YV  +L+ +Y     L +A+ +F NM  R+ V +N+LI+G    G  
Sbjct: 271 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 330

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLV-----SGYSIWGQSKEALVI-IHHMKNSGI---- 664
             A ++  +M  + ++PD  +  SLV      G    GQ   A    +    N+ I    
Sbjct: 331 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 390

Query: 665 ---------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                                  NVV W  ++      ++ R S + F QMQ E+I PN 
Sbjct: 391 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 450

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            T  S+L+TC  LG L+ G++IH   +K  F  +AYV + LIDMY+K G L +A ++  +
Sbjct: 451 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 510

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
            A K + SW  MI G+  Y    +A+  F ++L+ G + D +  T  ++AC     ++EG
Sbjct: 511 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 570

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW-DFIRTMPFKPDATIWGALLGSC 882
            +   + +        +   + +V L  + G ++E++  F +T     D   W AL+   
Sbjct: 571 -QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA--GDNIAWNALVSGF 627

Query: 883 RIHGHLEYA 891
           +  G+ E A
Sbjct: 628 QQSGNNEEA 636


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/840 (30%), Positives = 418/840 (49%), Gaps = 74/840 (8%)

Query: 270  SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
            S  G  QE   ++  +H  G+     I + +LK+   L     G ++H   IK GF  DV
Sbjct: 69   SRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 128

Query: 330  HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
             +  +L++ Y K  + +   K+F E+ +  + + W  +I    RN   +  + LF  MQ 
Sbjct: 129  SVGTSLVDTYMKGSNFKDGRKVFDEMKE-RNVVTWTTLISGYARNSMNDEVLTLFMRMQN 187

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               +  S T    L   A+ G    G Q+H  V+K+ L+  + V N LI++         
Sbjct: 188  EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINL--------- 238

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
                                  Y   G V  A  LF+K         ++TWN ++SG+  
Sbjct: 239  ----------------------YLKCGNVRKARILFDKTEVK----SVVTWNSMISGYAA 272

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
            +G     L +   M+    R + SS + V++    L+ L++  + H  +++ G  +D  +
Sbjct: 273  NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
             T+LM  Y K   + +A  +F  +    N+V+W ++ISG+        A  + ++M+ + 
Sbjct: 333  RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392

Query: 629  IKPDLVSWN-------------------------------SLVSGYSIWGQSKEALVIIH 657
            ++P+  +++                               +L+  Y   G+ +EA  +  
Sbjct: 393  VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
             + +     ++V W+++++G  Q      ++K F ++ +  IKPN  T SS+L  C    
Sbjct: 453  GIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508

Query: 718  L-LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
              +  GK+ H   +K+       V++ L+ MY+K GN++SA EVF++   K L SWN MI
Sbjct: 509  ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G+A +G   +A+ +F E+ +   + D +TF  + AAC ++GLVEEG KYFD M  D  I
Sbjct: 569  SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             PT EH SCMVDL  +AG L++A   I  MP    +TIW  +L +CR+H   E   +A+ 
Sbjct: 629  APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAE 688

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            ++  ++P +SA Y L+ N+ A S  W++  ++R  M+E  VK    +SWI++    + F 
Sbjct: 689  KIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFL 748

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            A    HP   +IY +L  L + +K LGY PDT  V QDID+E K  VL  H+E+LAI +G
Sbjct: 749  AGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFG 808

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF-REGECSCNDCW 1075
            L+ T   +P+ +IKN RVC DCH   K ++ +  REI +RD  RFHHF  +G CSC D W
Sbjct: 809  LIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 39/405 (9%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  YL+ G+   A   F     +S   W+S +  Y + G ++ E L ++  +    V 
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL-EALGMFYSMRLNYVR 292

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   ++KLC  L       ++H S++K GF FD +++ ALM  Y KC  +  A +L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+  + + + W  +I   L+N+  E A+ LF EM+    +    T   +L A   +  
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
                ++H  V+K+  E + +V   L+  Y +  K+E A +VF  + D ++ +W++M++ 
Sbjct: 413 ----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y   G  + A  +F ++    I+P+           FT  S  NV        S+G    
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPN----------EFTFSSILNVCAATNA--SMG---- 512

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
                              G++ HG+ +++ LD  L V ++L+ MY K   +++A+EVF 
Sbjct: 513 ------------------QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
             + +++V+WNS+ISGY   G  + A  +  +M++ ++K D V++
Sbjct: 555 RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 212/477 (44%), Gaps = 51/477 (10%)

Query: 484 LFNKMNSSRIQP--DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
           L+N  N     P  D  ++  LL G    G  Q    L   +  LG   + S  S VL+ 
Sbjct: 43  LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
              L    +GR+ H   ++ G   D+ VGTSL+D Y+K    ++ ++VFD MK RN+V W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------- 636
            +LISGY    +      +  +M+ E  +P+  ++                         
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222

Query: 637 ----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                     NSL++ Y   G  ++A ++    +      +VVTW S+ISG   N    E
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE----VKSVVTWNSMISGYAANGLDLE 278

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           +L  F  M+   ++ + ++ +S+++ C  L  L+  +++HC  +K GF+ D  + T L+ 
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338

Query: 747 MYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            YSK   +  A  +F++      + SW  MI GF      +EA+ LF E+   G +P+  
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398

Query: 806 TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
           T++ +L A     ++     +   + T+Y    T+   + ++D   K G ++EA      
Sbjct: 399 TYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSG 453

Query: 866 MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK--LEPCNSANYNLMMNLLAMSN 920
           +  K D   W A+L      G  E A      L K  ++P N   ++ ++N+ A +N
Sbjct: 454 IDDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP-NEFTFSSILNVCAATN 508



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 129/594 (21%), Positives = 261/594 (43%), Gaps = 90/594 (15%)

Query: 214 HAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
           H Q IK G +   DD+    SL+  Y++  +F    K F     R+   W++ +  Y + 
Sbjct: 116 HCQCIKFGFL---DDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY-AR 171

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
                E+L ++  +  +G    S      L +  +      G++VH  ++K G D  + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             +L+N Y KC +V  A  LF + ++++  + WN +I     N     A+ +F  M+ + 
Sbjct: 232 SNSLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +    +   +++ CA +      +Q+H  V+K     + ++   L+  YS+   +  A 
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350

Query: 452 RVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           R+F  +    N+ SW +MIS +      + A  LF++M    ++P+  T+          
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY---------- 400

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                                    SV+L A+  +       E H  +++   +    VG
Sbjct: 401 -------------------------SVILTALPVIS----PSEVHAQVVKTNYERSSTVG 431

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T+L+D YVK   ++ A +VF  + +++IVAW+++++GY   G    A KM  ++ +  IK
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491

Query: 631 PDLVSWNSLVS----------------GYSIWGQSKEAL-----VIIHHMKNSGI----- 664
           P+  +++S+++                G++I  +   +L     ++  + K   I     
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551

Query: 665 ------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                   ++V+W S+ISG  Q+    ++L  F +M++  +K +  T   +   C   GL
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611

Query: 719 LQNGKEIHCLCLKNGFIKDAYVA------TGLIDMYSKSGNLKSAREVFRKSAN 766
           ++ G++   +      ++D  +A      + ++D+YS++G L+ A +V     N
Sbjct: 612 VEEGEKYFDI-----MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 39/274 (14%)

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML---------------- 621
           V +  L NA  +FD    R+  ++ SL+ G+   G    AK++                 
Sbjct: 38  VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97

Query: 622 ---------------NQMEEEEIK----PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                           Q+  + IK     D+    SLV  Y      K+   +   MK  
Sbjct: 98  SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               NVVTWT+LISG  +N    E L  F++MQ E  +PNS T ++ L      G+   G
Sbjct: 158 ----NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            ++H + +KNG  K   V+  LI++Y K GN++ AR +F K+  K++ +WN MI G+A  
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           G   EA+ +F+ +     +    +F +++  C N
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/644 (37%), Positives = 354/644 (54%), Gaps = 49/644 (7%)

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            C IS  + +  L+   +   +     + S+  +    TGL  + +   +   M    +QP
Sbjct: 44   CSISPLTISATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQP 103

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
              +  + +++ + + G   + +++  G+      P       VL++  EL  +  G+  H
Sbjct: 104  TALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFP------FVLKSSVELLSVWMGKCVH 157

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            G ILR GL +DLYV TSL+ +Y K   + +A +VFDNM  R                   
Sbjct: 158  GLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR------------------- 198

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                            D+ SWN+L++GY+  G    AL I   M     + N+V+WT++I
Sbjct: 199  ----------------DVSSWNALLAGYTKSGCIDAALAIFERMP----WRNIVSWTTMI 238

Query: 676  SGSLQNENYRESLKFFIQMQQED--IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            SG  Q+   +++L  F +M +ED  ++PN  T+ S+L  C  L  L+ G++IH L  + G
Sbjct: 239  SGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMG 298

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRK--SANKTLASWNCMIMGFAIYGNGKEAILL 791
               +A V   L  MY+K G+L  AR  F K     K L +WN MI  +A YG+G +A+  
Sbjct: 299  LNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVST 358

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F E+++ G QPD ITFT LL+ C +SGLV+ G KYF+ MST Y+I P +EHY+C+ DLLG
Sbjct: 359  FREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLG 418

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L EA   +  MP     +IWG+LL +CR H +LE AE A+R+LF LEP N+ NY L
Sbjct: 419  RAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVL 478

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ A + RW++V++LR  +   G K     SWI+I+   H+F      HP   EIY  
Sbjct: 479  LSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMF 538

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            L  L  +MK  GY PDT  V  DI EEEK   L++H+EKLA+ +G++ T +   +RV KN
Sbjct: 539  LEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKN 598

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             R+C DCHTA  ++S + GRE+ +RD  RFHHF+ G CSC D W
Sbjct: 599  LRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 47/374 (12%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           + +  T L    LG +VHA ++ RG      +   ++ FY    D++S+  +F+ + D  
Sbjct: 76  VFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDY- 134

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
                                                 T   +L++  ++ +   GK +H
Sbjct: 135 -------------------------------------FTFPFVLKSSVELLSVWMGKCVH 157

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G +L+  L+ +L V   LI +Y +  ++  A +VFD+M   ++SSWN++++ YT  G +D
Sbjct: 158 GLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCID 217

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSV 537
            A ++F +M       +I++W  ++SG+   G  Q  L+L   M  +  G RPN  ++  
Sbjct: 218 AALAIFERMPWR----NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMS 273

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD--NMKN 595
           VL A  +L  L+ GR+ H    R GL+ +  V  +L  MY K   L +A+  FD  N   
Sbjct: 274 VLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNE 333

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
           +N++AWN++I+ Y   G  + A     +M +  I+PD +++  L+SG S  G     L  
Sbjct: 334 KNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKY 393

Query: 656 IHHMKNS-GIYPNV 668
            +HM  +  I P V
Sbjct: 394 FNHMSTTYSINPRV 407


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/613 (36%), Positives = 340/613 (55%), Gaps = 31/613 (5%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            +P+I  +N ++ G   +  +Q  + +   M+  G  P+  +   VL+A   +   + G +
Sbjct: 70   EPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVK 129

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             H  +++ G + D +V  SL+++Y K   + NA +VFD++ ++N  +W + ISGY   G 
Sbjct: 130  MHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGK 189

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV----- 668
               A  M  ++ E  ++PD  S   ++S     G  +    I  ++  +G+  NV     
Sbjct: 190  CREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATA 249

Query: 669  --------------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                                      V+W+S+I G   N   +E+L  F +M  E +KP+
Sbjct: 250  LVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPD 309

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
               M  +L +C  LG L+ G     L   N F+ ++ + T LIDMY+K G +  A EVFR
Sbjct: 310  CYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFR 369

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
                K    WN  I G A+ G+ K+A+ LF ++ ++G +PD  TF  LL AC ++GLVEE
Sbjct: 370  GMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEE 429

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G +YF+SM   + + P IEHY CMVDLLG+AG LDEA   I++MP + +A +WGALLG C
Sbjct: 430  GRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGC 489

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            R+H   +  E+  ++L  LEP +S NY L+ N+ A S++WE+  ++R  M E GVK +  
Sbjct: 490  RLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPG 549

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
            +SWI++D +VH F      HP + +IY +L  L  ++K  GYVP T  V  DI+EEEK  
Sbjct: 550  YSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEH 609

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             +  H+EKLA+ +GL+ T     I V+KN RVC DCH A K++S + GREI +RD  RFH
Sbjct: 610  FIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFH 669

Query: 1063 HFREGECSCNDCW 1075
             F +G CSC D W
Sbjct: 670  CFTDGLCSCKDYW 682



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 198/443 (44%), Gaps = 75/443 (16%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +HA+L++ G D D +L   ++ F     +   + ++  +  +  +  L+N +I   + N+
Sbjct: 29  IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKE-PNIFLFNTMIRGLVLND 87

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            ++ +I+++  M+       S T   +L+ACA+V     G ++H  V+K+  E++  V  
Sbjct: 88  CFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKI 147

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            LI++Y++   ++ A +VFD + D N +SW + IS Y G+G    A  +F          
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMF---------- 197

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                                    R +  +G RP+  S+  VL A      L+ G    
Sbjct: 198 -------------------------RRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWID 232

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            YI  NG+  +++V T+L+D Y K   ++ A+ VFD M  +NIV+W+S+I GY   GL  
Sbjct: 233 EYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPK 292

Query: 616 NAKKMLNQMEEEEIKPD------------------LVSWNS-----------------LV 640
            A  +  +M  E +KPD                  L  W S                 L+
Sbjct: 293 EALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALI 352

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             Y+  G+   A  +   M+      + V W + ISG   + + +++L  F QM++  IK
Sbjct: 353 DMYAKCGRMDRAWEVFRGMRKK----DRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIK 408

Query: 701 PNSTTMSSLLQTCGGLGLLQNGK 723
           P+  T   LL  C   GL++ G+
Sbjct: 409 PDRNTFVGLLCACTHAGLVEEGR 431



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 205/449 (45%), Gaps = 38/449 (8%)

Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           F CL  +K  HA ++++G   ++  + K L F +  FG+   + +        +   +++
Sbjct: 20  FSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSF-NFGNTNYSFRILDQTKEPNIFLFNT 78

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +          QE +E++  +  +G+   S     +LK C +++   LGV++H+ ++K 
Sbjct: 79  MIRGL-VLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKA 137

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G + D  +K +L+N Y KC  +++A K+F ++ D ++   W   I   +   K   AI +
Sbjct: 138 GCEADAFVKISLINLYTKCGFIDNAFKVFDDIPD-KNFASWTATISGYVGVGKCREAIDM 196

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           FR +     +  S ++V++L AC + G    G+ I  Y+ ++ +  N+ V   L+  Y +
Sbjct: 197 FRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGK 256

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              +E A  VFD M + N+ SW+SMI  Y   G    A  LF KM +             
Sbjct: 257 CGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNE------------ 304

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
                                  G +P+  ++  VL +   L  L+ G  +   I  N  
Sbjct: 305 -----------------------GLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEF 341

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             +  +GT+L+DMY K   +  A EVF  M+ ++ V WN+ ISG    G   +A  +  Q
Sbjct: 342 LDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQ 401

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           ME+  IKPD  ++  L+   +  G  +E 
Sbjct: 402 MEKSGIKPDRNTFVGLLCACTHAGLVEEG 430



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 171/379 (45%), Gaps = 41/379 (10%)

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           LK+ +  H  +LR GLD D Y+   ++           +  + D  K  NI  +N++I G
Sbjct: 23  LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWN------------------------------ 637
                 F  + ++ + M +E + PD  ++                               
Sbjct: 83  LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142

Query: 638 -----SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
                SL++ Y+  G    A  +   + +     N  +WT+ ISG +     RE++  F 
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDK----NFASWTATISGYVGVGKCREAIDMFR 198

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           ++ +  ++P+S ++  +L  C   G L++G+ I     +NG +++ +VAT L+D Y K G
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCG 258

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           N++ AR VF     K + SW+ MI G+A  G  KEA+ LF ++L  G +PD      +L 
Sbjct: 259 NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLC 318

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
           +C   G +E G  +  ++      +      + ++D+  K G +D AW+  R M  K D 
Sbjct: 319 SCARLGALELG-DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR-KKDR 376

Query: 873 TIWGALLGSCRIHGHLEYA 891
            +W A +    + GH++ A
Sbjct: 377 VVWNAAISGLAMSGHVKDA 395



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 117/291 (40%), Gaps = 41/291 (14%)

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
           G   L++ K IH   L+ G  +D Y+   ++      GN   +  +  ++    +  +N 
Sbjct: 19  GFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNT 78

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK-----------NSGLVEEG 823
           MI G  +    +E+I ++H + + G  PD+ TF  +L AC            +S +V+ G
Sbjct: 79  MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138

Query: 824 WK-----------------YFDSMSTDYNIIPTIEHYSCMVDLLG--KAGYLDEAWDFIR 864
            +                 + D+    ++ IP     S    + G    G   EA D  R
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198

Query: 865 ---TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
               M  +PD+     +L +C+  G L   E      +  E     N  +   L+    +
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDE--YITENGMVRNVFVATALVDFYGK 256

Query: 922 WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             ++ER R   D +  K+++ WS      ++  +++ G P  A  +++F++
Sbjct: 257 CGNMERARSVFDGMLEKNIVSWS-----SMIQGYASNGLPKEAL-DLFFKM 301


>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Cucumis sativus]
 gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Cucumis sativus]
          Length = 679

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/611 (38%), Positives = 355/611 (58%), Gaps = 16/611 (2%)

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            ISS + L  VD A S+F +        +   +N L+ G   +  +++ ++    M     
Sbjct: 81   ISSCSSLNSVDYAISIFQRFE----LKNSYLFNALIRGLAENSRFESSISFFVLMLKWKI 136

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
             P+  +   VL++   L     GR  H  IL+ GL++D +V  SL+DMYVK + L +A +
Sbjct: 137  SPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALK 196

Query: 589  VFD----NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            VFD    ++KN +++ WN LI GYC  G  V A ++ + M     K D  SWNSL++G+ 
Sbjct: 197  VFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMP----KKDTGSWNSLINGFM 252

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G    A  +   M       NVV+WT++++G  QN +  ++L+ F  M +E  +PN  
Sbjct: 253  KMGDMGRAKELFVKMPEK----NVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDY 308

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T+ S L  C  +G L  G  IH     NGF  +  + T L+DMY+K GN++ A +VF ++
Sbjct: 309  TIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHET 368

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K L  W+ MI G+AI+G+ ++A+  F  +  TG +PD++ F A+L AC +SG V EG 
Sbjct: 369  KEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGL 428

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            K+FD+M   Y I P+++HY+ +VD+LG+AG LDEA  FIR MP  PD  +WGAL  +CR 
Sbjct: 429  KFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRT 488

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H ++E AE+AS++L +LEP +  +Y  + N  A   RW+D ER+R SM + G      WS
Sbjct: 489  HKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWS 548

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            +I++D  +H F A    H    EIY +L  + +  ++ GY  +  CV  +I+EEEK + L
Sbjct: 549  FIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEAL 608

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+EKLA+ +G++ T+    +R++KN RVC DCH+  KY S +  REI LRD  RFHHF
Sbjct: 609  GYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHF 668

Query: 1065 REGECSCNDCW 1075
             +G CSC D W
Sbjct: 669  NDGVCSCGDYW 679



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 181/417 (43%), Gaps = 45/417 (10%)

Query: 335 LMNFYGKCRDVESANKLFS--EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           +  F   C  + S +   S  +  +L++  L+N +I     N ++E++I  F  M     
Sbjct: 77  VTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKI 136

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE------------------------ 428
                T   +L++ A +     G+ +H  +LK  LE                        
Sbjct: 137 SPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALK 196

Query: 429 -----------SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
                       ++ + N LI  Y R   L  AT +FDSM   +  SWNS+I+ +  +G 
Sbjct: 197 VFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGD 256

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
           +  A  LF KM     + ++++W  +++G   +G  +  L     M   G RPN  ++  
Sbjct: 257 MGRAKELFVKMP----EKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVS 312

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            L A  ++  L  G   H Y+  NG   +L +GT+L+DMY K   +++A++VF   K + 
Sbjct: 313 ALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKG 372

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           ++ W+ +I G+   G F  A +    M+    KPD V + ++++  S  GQ  E L    
Sbjct: 373 LLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFD 432

Query: 658 HMKNSG-IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +M+    I P++  +T ++    +     E+LKF   M    I P+     +L   C
Sbjct: 433 NMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMP---ITPDFVVWGALFCAC 486



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 1/191 (0%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +L+N + K  D+  A +LF ++ + ++ + W  ++    +N   E A++ F  M    A+
Sbjct: 246 SLINGFMKMGDMGRAKELFVKMPE-KNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGAR 304

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               TIV  L ACAK+GA   G +IH Y+  +  + NL +   L+ MY++   +E A +V
Sbjct: 305 PNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKV 364

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F   K+  L  W+ MI  +   G+   A   F  M  +  +PD + +  +L+     G  
Sbjct: 365 FHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQV 424

Query: 514 QNVLTLLRGMQ 524
              L     M+
Sbjct: 425 NEGLKFFDNMR 435



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 108/227 (47%), Gaps = 3/227 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  +++ GD   A + F     ++   W++ +  + S  G+ ++ LE +  +  +G  
Sbjct: 246 SLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGF-SQNGDPEKALETFFCMLEEGAR 304

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +   L  C K+ A   G+ +H  L   GF  ++ +  AL++ Y KC ++E A K+
Sbjct: 305 PNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKV 364

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E  + +  L+W+ +I     +  +  A++ F  M+F+  K  S   + +L AC+  G 
Sbjct: 365 FHETKE-KGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQ 423

Query: 412 FHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            +EG +    + +  L E ++     ++ M  R  +L+ A +   +M
Sbjct: 424 VNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAM 470


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
            [Vitis vinifera]
          Length = 698

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/633 (36%), Positives = 348/633 (54%), Gaps = 43/633 (6%)

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            +D A S+F +++    +PD   +N ++ G     S    + L + M     +P+  +   
Sbjct: 74   MDYAVSIFRQID----EPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPC 129

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            +L+  + L+ L  G + H  I++ G     +V  +L+ MY     ++ A+ VFD M  RN
Sbjct: 130  ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERN 189

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------------W--- 636
            +  WNS+ +GY   G +    K+ ++M E +I+ D V+                  W   
Sbjct: 190  VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINR 249

Query: 637  --------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                           SLV  Y+  GQ   A  +   M       +VV W+++ISG  Q  
Sbjct: 250  YVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRR----DVVAWSAMISGYSQAS 305

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              RE+L  F +MQ+ +I PN  TM S+L +C  LG L+ GK +H    K        + T
Sbjct: 306  RCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGT 365

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             L+D Y+K G+++S+ EVF K   K + SW  +I G A  G GK+A+  F+ +LE   +P
Sbjct: 366  ALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEP 425

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + +TF  +L+AC ++GLV+EG   F SMS D+ I P IEHY CMVD+LG+AG ++EA+ F
Sbjct: 426  NDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQF 485

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I+ MP +P+A IW  LL SC++H ++E  E + ++L  LEP +S +Y L+ N+ A   RW
Sbjct: 486  IKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRW 545

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            ED  ++R  M E G+K     S I++D ++H F AE   H  + EIY  +  ++ ++K  
Sbjct: 546  EDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSA 605

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVP+T     D +E++K   +  H+EKLAI +GL+K+     IR+ KN RVC+DCH A 
Sbjct: 606  GYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNAT 665

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K +S V  REI +RD  RFHHF+EG CSCND W
Sbjct: 666  KLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 206/439 (46%), Gaps = 40/439 (9%)

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
            E + ++ E+H   V         ILK+C++L A   G ++HA ++K GF     +K  L
Sbjct: 106 HEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTL 165

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
           ++ Y  C +VE A ++F E+S+  +   WN +     ++  WE  +KLF EM     +  
Sbjct: 166 IHMYANCGEVEVARRVFDEMSE-RNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFD 224

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
             T+V +L AC ++     G+ I+ YV +  L+ N ++   L+ MY++  +++ A R+FD
Sbjct: 225 EVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFD 284

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            M   ++ +W++MIS Y+       A  LF++M  + I P+ IT   +LS     G+   
Sbjct: 285 QMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGA--- 341

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
                                           L+ G+  H +I +  +   + +GT+LMD
Sbjct: 342 --------------------------------LETGKWVHFFIKKKRMKLTVTLGTALMD 369

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            Y K   ++++ EVF  M  +N+++W  LI G    G    A +    M E+ ++P+ V+
Sbjct: 370 FYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429

Query: 636 WNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
           +  ++S  S  G   E   +   M ++ GI P +  +  ++    +     E+ +F   M
Sbjct: 430 FIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNM 489

Query: 695 QQEDIKPNSTTMSSLLQTC 713
               I+PN+    +LL +C
Sbjct: 490 P---IQPNAVIWRTLLASC 505



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 236/566 (41%), Gaps = 105/566 (18%)

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC--RDVESA 348
           +F     T+IL+ C  +       E+HA LIK        +   L+          ++ A
Sbjct: 21  LFPENPKTLILEQCKTIRDL---NEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYA 77

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F ++ D  D   +N +I      +    AI LF+EM  +S +    T   +L+ C++
Sbjct: 78  VSIFRQI-DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A  EG+QIH  ++K    S+  V N LI MY+   ++E+A RVFD M + N+ +WNSM
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            + YT                                     G+++ V+ L   M  L  
Sbjct: 197 FAGYT-----------------------------------KSGNWEEVVKLFHEMLELDI 221

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           R +  ++  VL A   L  L+ G   + Y+   GL  +  + TSL+DMY K   +  A+ 
Sbjct: 222 RFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARR 281

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           +FD M  R++VAW+++ISGY        A  + ++M++  I P+ ++  S++S  ++ G 
Sbjct: 282 LFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGA 341

Query: 649 SKEALVIIHHMKNS-----------------------------GIYP--NVVTWTSLISG 677
            +    +   +K                               G  P  NV++WT LI G
Sbjct: 342 LETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQG 401

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              N   +++L++F  M +++++PN  T   +L  C   GL+  G+++            
Sbjct: 402 LASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL------------ 449

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
                  + M    G                +  + CM+      G  +EA   F  +  
Sbjct: 450 ------FVSMSRDFG------------IEPRIEHYGCMVDILGRAGLIEEA---FQFIKN 488

Query: 798 TGFQPDAITFTALLAACKNSGLVEEG 823
              QP+A+ +  LLA+CK    VE G
Sbjct: 489 MPIQPNAVIWRTLLASCKVHKNVEIG 514



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 150/312 (48%), Gaps = 5/312 (1%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
           C L   ++ + LS  +  HA ++K G  + S   VK+ + H Y   G+   A + F    
Sbjct: 129 CILKVCSRLQALSEGEQIHALIMKCG--FGSHGFVKNTLIHMYANCGEVEVARRVFDEMS 186

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            R+   W+S    Y +  G  +E+++++ E+    + F    L  +L  C +L    LG 
Sbjct: 187 ERNVRTWNSMFAGY-TKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGE 245

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            ++  + ++G   +  L  +L++ Y KC  V++A +LF ++ D  D + W+ +I    + 
Sbjct: 246 WINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQM-DRRDVVAWSAMISGYSQA 304

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            +   A+ LF EMQ ++      T+V +L +CA +GA   GK +H ++ K  ++  +++ 
Sbjct: 305 SRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLG 364

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+  Y++   +E +  VF  M   N+ SW  +I      G    A   F  M    ++
Sbjct: 365 TALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVE 424

Query: 495 PDIITWNCLLSG 506
           P+ +T+  +LS 
Sbjct: 425 PNDVTFIGVLSA 436



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 4/245 (1%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           ++ SL+  Y + G   +A + F     R    WS+ +  Y S     +E L+++ E+   
Sbjct: 262 LITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGY-SQASRCREALDLFHEMQKA 320

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            +      +  IL  C  L A   G  VH  + K+     V L  ALM+FY KC  VES+
Sbjct: 321 NIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESS 380

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            ++F ++  +++ L W  +I     N + + A++ F  M   + +    T + +L AC+ 
Sbjct: 381 IEVFGKMP-VKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSH 439

Query: 409 VGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWN 466
            G   EG+ +   + +   +E  +    C++ +  R   +E A +   +M    N   W 
Sbjct: 440 AGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWR 499

Query: 467 SMISS 471
           ++++S
Sbjct: 500 TLLAS 504


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 624

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/600 (38%), Positives = 332/600 (55%), Gaps = 43/600 (7%)

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G ++ A  +F+K+      PD   +N +  G+      +N + +   M      PN  + 
Sbjct: 68   GDLNYALEVFDKIP----HPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTY 123

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              +++A      ++ G++ H ++L+ G   D +   +L+ MYV    L+ A+ VFDNM  
Sbjct: 124  PPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQ 183

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            R                                   D+VSW SL++GYS WG   +A  +
Sbjct: 184  R-----------------------------------DVVSWTSLITGYSQWGFVDKAREV 208

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
               M       N V+W ++I+  +Q+    E+   F +M+ E++  +    +S+L  C G
Sbjct: 209  FELMPER----NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTG 264

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            LG L+ GK IH    K+G   D+ +AT +IDMY K G L+ A EVF +   K ++SWNCM
Sbjct: 265  LGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCM 324

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I G A++G G+ AI LF E+      PD ITF  +L+AC +SGLVEEG  YF  M+    
Sbjct: 325  IGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLG 384

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            + P +EH+ CMVDLLG+AG L+EA   I  MP  PDA + GAL+G+CRIHG+ E  E   
Sbjct: 385  LKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIG 444

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            +++ +LEP NS  Y L+ NL A + RWEDV ++R  M++ GVK    +S I+ +  V  F
Sbjct: 445  KKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEF 504

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A G  HP   EIY +L  ++  ++ +GYVPDT  V  DIDEEEK   L  H+EKLAI +
Sbjct: 505  IAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAF 564

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+KTK    +R+ KN R+C DCH A+K +S V  REI +RD  RFHHFR G CSC D W
Sbjct: 565  GLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 230/507 (45%), Gaps = 26/507 (5%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNF--YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           + H+ +I+ G   D      ++ F    K  D+  A ++F ++    D  ++N I    L
Sbjct: 38  QYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPH-PDAYIYNTIFRGYL 96

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           R +   N I ++  M   S      T   +++AC    A  EGKQIH +VLK    ++  
Sbjct: 97  RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGF 156

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
             N LI MY     LE A RVFD+M   ++ SW S+I+ Y+  G+VD A  +F  M    
Sbjct: 157 SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMP--- 213

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + + ++WN +++ +           L   M+      +    + +L A T L  L+ G+
Sbjct: 214 -ERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGK 272

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             HGYI ++G++ D  + T+++DMY K  CL+ A EVF+ +  + I +WN +I G    G
Sbjct: 273 WIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHG 332

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
               A ++  +ME E + PD +++ +++S  +  G  +E      +M    G+ P +  +
Sbjct: 333 KGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF 392

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL- 730
             ++    +     E+ K   +M    + P++  + +L+  C   G  + G++I    + 
Sbjct: 393 GCMVDLLGRAGLLEEARKLINEMP---VNPDAGVLGALVGACRIHGNTELGEQIGKKVIE 449

Query: 731 -------KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM---IMGFA 780
                  +   + + Y + G  +  +K   L + R V +      + S + +   I G  
Sbjct: 450 LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGR 509

Query: 781 IYGNGKEAILLFHELLET----GFQPD 803
            +   KE      E+LET    G+ PD
Sbjct: 510 AHPQAKEIYAKLDEILETIRSIGYVPD 536



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 3/227 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  Y ++G    A + F L   R+   W++ +  Y      + E   ++  +  + V+
Sbjct: 191 SLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQ-SNRLHEAFALFDRMRLENVV 249

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
               +   +L  CT L A   G  +H  + K G + D  L   +++ Y KC  +E A+++
Sbjct: 250 LDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEV 309

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+E+   +    WN +I     + K E AI+LF+EM+         T V +L ACA  G 
Sbjct: 310 FNELPQ-KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGL 368

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
             EGK    Y+ +   L+  +    C++ +  R   LE A ++ + M
Sbjct: 369 VEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEM 415



 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 16/227 (7%)

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM--YSKSGNLKSAREVFRKSANK 767
           L +C  +  L   K+ H   ++ G   D      +I     SKSG+L  A EVF K  + 
Sbjct: 27  LDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHP 83

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
               +N +  G+  +   +  I ++  +L     P+  T+  L+ AC     +EEG K  
Sbjct: 84  DAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEG-KQI 142

Query: 828 DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            +    +         + ++ +      L++A      MP + D   W +L+      G 
Sbjct: 143 HAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR-DVVSWTSLITGYSQWGF 201

Query: 888 LEYAEIASRRLFKLEP-CNSANYNLMMNLLAMSNRWEDV----ERLR 929
           ++ A    R +F+L P  NS ++N M+     SNR  +     +R+R
Sbjct: 202 VDKA----REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 259/788 (32%), Positives = 416/788 (52%), Gaps = 84/788 (10%)

Query: 293  RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL--MNFYGKCRDVESANK 350
            RSR +++I + C  L       + H  +I+ G   D +    L  M        +E A K
Sbjct: 30   RSRHISLIER-CVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85

Query: 351  LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKV 409
            +F E+    +   WN +I           +I  F +M   S    ++ T   +++A A+V
Sbjct: 86   VFDEIPK-PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 144

Query: 410  GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
             +   G+ +HG  +KSA+ S++ V N                               S+I
Sbjct: 145  SSLSLGQSLHGMAVKSAVGSDVFVAN-------------------------------SLI 173

Query: 470  SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
              Y   G +D A  +F  +     + D+++WN +++G    GS    L L + M+S   +
Sbjct: 174  HCYFSCGDLDSACKVFTTIK----EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
             +  ++  VL A  ++R L++GR+   YI  N ++ +L +  +++DMY K          
Sbjct: 230  ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK---------- 279

Query: 590  FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
                               C  G   +AK++ + MEE+    D V+W +++ GY+I    
Sbjct: 280  -------------------C--GSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDY 314

Query: 650  KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSS 708
            + A  +++ M       ++V W +LIS   QN    E+L  F ++Q Q+++K N  T+ S
Sbjct: 315  EAAREVLNSMPQK----DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
             L  C  +G L+ G+ IH    K+G   + +V + LI MYSK G+L+ +REVF     + 
Sbjct: 371  TLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 430

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            +  W+ MI G A++G G EA+ +F+++ E   +P+ +TFT +  AC ++GLV+E    F 
Sbjct: 431  VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
             M ++Y I+P  +HY+C+VD+LG++GYL++A  FI  MP  P  ++WGALLG+C+IH +L
Sbjct: 491  QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
              AE+A  RL +LEP N   + L+ N+ A   +WE+V  LR  M   G+K     S I+I
Sbjct: 551  NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE-KGKVLLSH 1007
            D ++H F +    HP + ++Y +L+ ++ ++K  GY P+   V Q I+EEE K + L  H
Sbjct: 611  DGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLH 670

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLAI YGL+ T++   IRVIKN RVC DCH+ AK +S +  REI +RD  RFHHFR G
Sbjct: 671  SEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNG 730

Query: 1068 ECSCNDCW 1075
            +CSCND W
Sbjct: 731  QCSCNDFW 738



 Score =  194 bits (493), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 274/566 (48%), Gaps = 24/566 (4%)

Query: 205 RCLS--SVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTS---AAKAFFLYFSRSYA 259
           RC+S   +K  H  MI+ G    SD    S +F       F S   A K F      +  
Sbjct: 39  RCVSLRQLKQTHGHMIRTGTF--SDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96

Query: 260 DWSSFLEDYESFGGEVQELLEVWG--ELHGKGVIFRSR-ILTIILKLCTKLMAFWLGVEV 316
            W++ +  Y S    V   L +W   ++  +   + ++     ++K   ++ +  LG  +
Sbjct: 97  AWNTLIRAYASGPDPV---LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H   +K     DV +  +L++ Y  C D++SA K+F+ + + +D + WN +I   ++   
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE-KDVVSWNSMINGFVQKGS 212

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            + A++LF++M+    KA   T+V +L ACAK+     G+Q+  Y+ ++ +  NL++ N 
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           ++ MY++   +E A R+FD+M++ +  +W +M+  Y      + A  + N M     Q D
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP----QKD 328

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           I+ WN L+S +  +G     L +   +Q     + N  ++   L A  ++  L+ GR  H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            YI ++G+  + +V ++L+ MY K   L+ ++EVF++++ R++  W+++I G    G   
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSL 674
            A  M  +M+E  +KP+ V++ ++    S  G   EA  + H M+ N GI P    +  +
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           +   L    Y E    FI+     I P+++   +LL  C     L N  E+ C  L    
Sbjct: 509 VD-VLGRSGYLEKAVKFIEAMP--IPPSTSVWGALLGACKIHANL-NLAEMACTRLLELE 564

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREV 760
            ++      L ++Y+K G  ++  E+
Sbjct: 565 PRNDGAHVLLSNIYAKLGKWENVSEL 590


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 283/892 (31%), Positives = 439/892 (49%), Gaps = 106/892 (11%)

Query: 246  AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
            A + F  + +R    WS+ +  Y   G   Q    ++ ++ G+G+      L  +LK+  
Sbjct: 74   AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAF-GLFQKMMGEGLQPNGFSLASLLKVSC 132

Query: 306  KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE-DDLLW 364
                  L  ++H   I+ GF  D  ++ A +  Y +C  +E A ++F E S L  D LLW
Sbjct: 133  STGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLW 192

Query: 365  NEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVL 423
            N II   + +  W   ++LF +M      A +  T   ++ AC   G    G  +HG ++
Sbjct: 193  NSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRII 252

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            K+ LE+                               NL  WNS+++ Y   G +  A  
Sbjct: 253  KAGLEAT------------------------------NL--WNSLVTFYGKCGNLQHASQ 280

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL--GFRPNGSSVSVVLQA 541
            LF +++    + D+++WN +++ +   G  +N L L R M  +    +PN  +   +L A
Sbjct: 281  LFERIS----RKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSA 336

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
            V+ L  L+ GRE H +I R  L+ D  +  SL+  Y K   +  A+E+F+ +  R+I++W
Sbjct: 337  VSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISW 396

Query: 602  NSLISGY--------CFKGLFVNAKKMLNQMEEE-------------------------- 627
            NS+++GY        CF    +  + ML+ +E +                          
Sbjct: 397  NSMLAGYEQNEQQGRCFD---IFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKE 453

Query: 628  -------EIKPDLVSW---NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                    I P  VS    N+++  Y+ + +  +A  I   MKN   Y    +W +++ G
Sbjct: 454  IHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSY----SWNAMMDG 509

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK--NGFI 735
              +N  + + L  F+ + ++    +  ++S LL +CG L  LQ GK+ H +  K  NG  
Sbjct: 510  YSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQD 569

Query: 736  ---KDAYVA--TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
               +D+ ++    LI MYSK G++K A +VF K   K + SW  MI G A +G   EA+ 
Sbjct: 570  CPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQ 629

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF  +   G +P+ +TF ALL AC + GLV+EG  YFDSM  DY + P+IEHY+CM+DL 
Sbjct: 630  LFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLF 689

Query: 851  GKAGYLDEAWDFIR--TMPFKP----DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
            G++G  D A   +      FKP       +W  LLG+C     L+    A+ ++ +LEP 
Sbjct: 690  GRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPE 749

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            + A Y L+ NL A S  WED  ++R +M + G++  +  SWI      HVF A    HP 
Sbjct: 750  DEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQ 809

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK-SR 1023
              EIY +L  L    +++GYVP T  V  D+DE EK  +L  H+EKLA+ +GL+      
Sbjct: 810  RKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGN 869

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              IRV+KN RVC DCH+  K+ SL+  REI LRD  RFH FR+G CSC D W
Sbjct: 870  GVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 187/419 (44%), Gaps = 49/419 (11%)

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           RN +LE     F S      S+ +  + S +    +  A  LF+   +     D+I+W+ 
Sbjct: 36  RNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNR----DVISWSA 91

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           L++ +   G++     L + M   G +PNG S++ +L+       +   R+ HG+ +R G
Sbjct: 92  LIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTG 151

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFD--NMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
              D  +  + + MY +   L++AQ VFD  ++   +I+ WNS+I+ Y F G +V   ++
Sbjct: 152 FGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRL 211

Query: 621 LNQM-----------------------EEEE---------IKPDLVS---WNSLVSGYSI 645
             +M                        EE+         IK  L +   WNSLV+ Y  
Sbjct: 212 FCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLWNSLVTFYGK 271

Query: 646 WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNS 703
            G  + A  +   +       +VV+W ++I+ + Q      +L  F +M + +  ++PN 
Sbjct: 272 CGNLQHASQLFERISRK----DVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNR 327

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            T  SLL    GL  L+ G+EIH    +     D  +   LI  YSK   +  ARE+F +
Sbjct: 328 VTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFER 387

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK--NSGLV 820
              + + SWN M+ G+           +F  ++ +G +PD+ + T +  A    +SGL+
Sbjct: 388 LLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLI 446



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 21/335 (6%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L+  +    L   +  HA + ++  +     +  SLI  Y +  +   A + F     R
Sbjct: 333 LLSAVSGLSALRCGREIHAHIFRL-SLEVDTSITNSLITFYSKCREVGKAREIFERLLLR 391

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTK----LMAFWL 312
               W+S L  YE    +     +++  +   G+   S  LTII    ++    L+ F  
Sbjct: 392 DIISWNSMLAGYEQ-NEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRR 450

Query: 313 GVEVHASLIKRGFDFDVHLKC--ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
           G E+H  +++R     V L    A++  Y K   +  A K+F  + +  D   WN ++  
Sbjct: 451 GKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKN-RDSYSWNAMMDG 509

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK------ 424
             RN K+E+ + +F ++          ++  +L +C ++ +   GKQ H  V K      
Sbjct: 510 YSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQD 569

Query: 425 -SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
               +S LS+ N LISMYS+   ++ A +VF  M+  ++ SW +MI+     G    A  
Sbjct: 570 CPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQ 629

Query: 484 LFNKMNSSRIQPDIITWNCLL-----SGHFTHGSY 513
           LF +M +  I+P+ +T+  LL      G    GSY
Sbjct: 630 LFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSY 664



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 12/144 (8%)

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
           S+   LK A+++F    N+ + SW+ +I  ++  GN  +A  LF +++  G QP+  +  
Sbjct: 66  SEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLA 125

Query: 809 ALLAACKNSGLVE-----EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD-F 862
           +LL    ++G +       GW    S+ T + +   I   +  + +  + G L++A   F
Sbjct: 126 SLLKVSCSTGEIGLCRQLHGW----SIRTGFGLDSGIR--AAWITMYSRCGVLEDAQRVF 179

Query: 863 IRTMPFKPDATIWGALLGSCRIHG 886
             T     D  +W +++ +   HG
Sbjct: 180 DETSLLALDILLWNSIIAAYIFHG 203


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 254/762 (33%), Positives = 400/762 (52%), Gaps = 82/762 (10%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD--LLWNEIIMVKLR 373
            +HA +IK G     +    L+ F       +      S    +++   L+WN +      
Sbjct: 7    IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 374  NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
            +    +A+KL+  M        S T   +L++CAK     EG+QIHG+VLK   + ++ V
Sbjct: 67   SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126

Query: 434  CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
               LISMY++N +LE A +VFD     ++ S+ ++I+ Y   GY++ A  LF+++     
Sbjct: 127  HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK-- 184

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGR 552
              D+++WN ++SG+   G+Y+  L L + M  +   RP+ S++  V+ A  +   ++ GR
Sbjct: 185  --DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
              H +I  +G   +L +  +L+D+Y K   ++ A E+FD + N+++++WN+LI GY    
Sbjct: 243  HVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMN 302

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
            L+                                   KEAL++   M  SG  PN V   
Sbjct: 303  LY-----------------------------------KEALLLFQEMLRSGETPNDV--- 324

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC--- 729
                                            TM S+L  C  LG +  G+ IH      
Sbjct: 325  --------------------------------TMLSILPACAHLGAIDIGRWIHVYINKK 352

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS-ANKTLASWNCMIMGFAIYGNGKEA 788
            LK      + + T LIDMY+K G++ +A++VF  S +N++L++WN MI GFA++G    A
Sbjct: 353  LKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAA 412

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
              +F  +   G +PD ITF  LL+AC +SG+++ G   F SM+  Y I P +EHY CM+D
Sbjct: 413  FDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMID 472

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG +G   EA + I TMP +PD  IW +LL +C+IHG+LE  E  +++L K+EP NS +
Sbjct: 473  LLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGS 532

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGV-KSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            Y L+ N+ A + RW +V ++R  +++ G+ K V   S I+ID +VH F      HP   E
Sbjct: 533  YVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNRE 592

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY  L  +   +++ G+VPDT  V Q+++EE +   L  H+EKLAI +GL+ TK    + 
Sbjct: 593  IYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLT 652

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            ++KN RVC +CH A K +S +  REI  RD  RF HFR+G C
Sbjct: 653  IMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 242/555 (43%), Gaps = 79/555 (14%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYL--EFGDFTSAAKAFFLYFSRSYADWSSFL 265
           SSV+  HAQMIK G    +  + K L F  +   F  F  A   F      +   W++  
Sbjct: 2   SSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             + +   +    L+++  +   G++  S     +LK C K      G ++H  ++K GF
Sbjct: 62  RGH-ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGF 120

Query: 326 DFDVHLKCALMNFY---GKCRD----------------------------VESANKLFSE 354
           D D+++  +L++ Y   G+  D                            +ESA KLF E
Sbjct: 121 DLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDE 180

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE-MQFSSAKAISRTIVKMLQACAKVGAFH 413
           +   +D + WN +I   +    ++ A++LF+E M  ++ +    T+V ++ ACA+  +  
Sbjct: 181 IPG-KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIE 239

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G+ +H ++      SNL + N LI +YS+  ++E A  +FD + + ++ SWN++I  YT
Sbjct: 240 LGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYT 299

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
            +     A  LF +M  S                                   G  PN  
Sbjct: 300 HMNLYKEALLLFQEMLRS-----------------------------------GETPNDV 324

Query: 534 SVSVVLQAVTELRLLKYGRESHGYI---LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           ++  +L A   L  +  GR  H YI   L+  +     + TSL+DMY K   +  AQ+VF
Sbjct: 325 TMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVF 384

Query: 591 D-NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           D +M NR++  WN++ISG+   G    A  + ++M    I+PD +++  L+S  S  G  
Sbjct: 385 DSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGML 444

Query: 650 KEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                I   M +   I P +  +  +I     +  ++E+ +    M  E   P+     S
Sbjct: 445 DLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME---PDGVIWCS 501

Query: 709 LLQTCGGLGLLQNGK 723
           LL+ C   G L+ G+
Sbjct: 502 LLKACKIHGNLELGE 516


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/713 (34%), Positives = 379/713 (53%), Gaps = 46/713 (6%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L+ C        GK +H   +KS +  +    N  I +YS+  +L  A + F  + D N
Sbjct: 14   LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            + S+N++I++Y       +A  LF+++     +PD++++N L+S +   G     L L  
Sbjct: 74   VFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALGLFS 129

Query: 522  GMQSLGFRPNGSSVSVVLQAV-TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
            GM+ +G   +  ++S V+ A   ++ L+    + H   + +G D  + V  +L+  Y KN
Sbjct: 130  GMREMGLDMDXFTLSAVITACCDDVGLIG---QLHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 581  DCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
              L +A+ VF  M   R+ V+WNS+I  Y        A  +  +M    +  D+ +  S+
Sbjct: 187  GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIY--------------------------------PN 667
            ++ ++        L     +  +G +                                P+
Sbjct: 247  LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306

Query: 668  VVTWTSLISGSLQNENYRE-SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            +V W +++SG  QNE + E +L+ F QMQ    +PN  +   ++  C  L     GK+IH
Sbjct: 307  LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIH 366

Query: 727  CLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
             L LK+    +   V   LI MYSK GNL+ AR +F + A     S N MI G+A +G  
Sbjct: 367  SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
             E++ LF  +LE    P +ITF ++L+AC ++G VEEGW YF+ M   +NI P  EHYSC
Sbjct: 427  MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            M+DLLG+AG L EA + I  MPF P +  W +LLG+CR HG++E A  A+ ++ +LEP N
Sbjct: 487  MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            +A Y ++ N+ A + RWE+V  +R  M + GVK     SWI++ + +HVF AE + HP  
Sbjct: 547  AAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMI 606

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV---LLSHTEKLAIVYGLMKTKS 1022
             EIY  L  +  +MK+ GYVPD R      D    G+    L  H+EKLA+ +GL+ TK 
Sbjct: 607  KEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKD 666

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              P+ V+KN R+C DCH A K++S + GREI +RD  RFH F+EG+CSC D W
Sbjct: 667  GEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 200/445 (44%), Gaps = 44/445 (9%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           GE    L ++  +   G+      L+ ++  C   +   +G ++H+  +  GFD  V + 
Sbjct: 119 GETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVN 176

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+ +YGK  D++ A ++F  +  + D++ WN +I+   ++++   A+ LF+EM     
Sbjct: 177 NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGL 236

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR-NNKLELAT 451
                T+  +L A   +     G Q HG ++K+    N  V + LI +YS+    +    
Sbjct: 237 NVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCR 296

Query: 452 RVFDSMKDHNLSSWNSMISSYT-GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           +VF+ + + +L  WN+M+S Y+    +++ A   F +M                      
Sbjct: 297 KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM---------------------- 334

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD-LYV 569
                        Q +G+RPN  S   V+ A + L     G++ H   L++ +  + + V
Sbjct: 335 -------------QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISV 381

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             +L+ MY K   LQ+A+ +FD M   N V+ NS+I+GY   G+ + +  +   M E +I
Sbjct: 382 DNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQI 441

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
            P  +++ S++S  +  G+ +E     + MK    I P    ++ +I    +     E+ 
Sbjct: 442 APTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAE 501

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
               +M      P S   +SLL  C
Sbjct: 502 NLIARMP---FNPGSIGWASLLGAC 523



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 130/570 (22%), Positives = 221/570 (38%), Gaps = 114/570 (20%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD-- 357
           +LK C        G  +H+  IK       +     +  Y KC  +  A K F ++SD  
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 358 ---------------------------LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQF 389
                                       E DL+ +N +I       +   A+ LF  M+ 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 390 SSAKAISRTIVKMLQACA-KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                   T+  ++ AC   VG      Q+H   + S  +S +SV N L++ Y +N  L+
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLI---GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 449 LATRVFDSMKD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            A RVF  M    +  SWNSMI +Y                                 G 
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAY---------------------------------GQ 217

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              GS    L L + M   G   +  +++ VL A T L  L  G + HG +++ G   + 
Sbjct: 218 HQEGS--KALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 568 YVGTSLMDMYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV-NAKKMLNQME 625
           +VG+ L+D+Y K    + + ++VF+ +   ++V WN+++SGY     F+ +A +   QM+
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 626 EEEIKPDLVSW------------------------------------NSLVSGYSIWGQS 649
               +P+  S+                                    N+L++ YS  G  
Sbjct: 336 GIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNL 395

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           ++A  +   M       N V+  S+I+G  Q+    ESL  F  M +  I P S T  S+
Sbjct: 396 QDARRLFDRMAEH----NTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISV 451

Query: 710 LQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANK 767
           L  C   G ++ G    + +  K     +A   + +ID+  ++G L  A   + R   N 
Sbjct: 452 LSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNP 511

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLE 797
               W  ++     +GN + A+   +++L+
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQ 541


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Brachypodium distachyon]
          Length = 804

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 251/750 (33%), Positives = 390/750 (52%), Gaps = 62/750 (8%)

Query: 340  GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS--SAKAISR 397
            G+ RD  SA    S      D +L N +I    R      A+ +FR +  S  S +    
Sbjct: 103  GRLRD--SAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDY 160

Query: 398  TIVKMLQACAKVGAFHE-----GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL--- 449
            +   +L A   VG  H+       Q+H  V K    + LSV N LI++Y + +   +   
Sbjct: 161  SFTSLLSA---VGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRD 217

Query: 450  ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
            A +V D M + +  +W +++  +   G V  A S F +++    + D++ WN ++SG+  
Sbjct: 218  ARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDG---EFDVV-WNAMISGYVQ 273

Query: 510  HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY---- 565
             G       L R M S    P+  + + +L A        +G+  HG  +R   D+    
Sbjct: 274  SGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEA 333

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
             L V  +L+ +Y K+  +  A ++FD+M  +                             
Sbjct: 334  ALPVNNALVTLYSKSGKIAVATKIFDSMTLK----------------------------- 364

Query: 626  EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                  D+VSWN+++SGY   G    A  I   M     Y + ++W  ++SG +      
Sbjct: 365  ------DVVSWNTILSGYIESGCLDNAARIFKEMP----YKSELSWMVMVSGYVHGGLAE 414

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            ++LK F QM+ ED+KP   T +  +  CG LG L++GK++H   ++ GF         L+
Sbjct: 415  DALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALL 474

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
             MY++ G +K AR VF    N    SWN MI     +G+G+EA+ LF +++  G  PD I
Sbjct: 475  TMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRI 534

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            +F  +L AC ++GLV++G++YF+SM  D+ I P  +HY+ ++DLLG+AG + EA D I+T
Sbjct: 535  SFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKT 594

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MPF+P   IW A+L  CRI+G +E    A+ +LFK+ P +   Y L+ N  + + RW D 
Sbjct: 595  MPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDA 654

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
             R+R  M + GVK     SWI++   VHVF      HP   E+Y  L  + ++M+KLGYV
Sbjct: 655  ARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYV 714

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            PDT+   QD+   EK  VL +H+E+LA+ +GL+K  + A + V+KN ++C DCHTA  +M
Sbjct: 715  PDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFM 774

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S   GREI +RD  RFHHF++GECSC + W
Sbjct: 775  SRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 7/216 (3%)

Query: 207 LSSVKSKHAQMIKMGKIWNS---DDMVK--SLIFHYLEFGDFTSAAKAFFLYFSRSYADW 261
           L ++ SK  ++    KI++S    D+V   +++  Y+E G   +AA+ F     +S   W
Sbjct: 341 LVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSW 400

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
              +  Y   GG  ++ L+++ ++  + V          +  C +L A   G ++HA L+
Sbjct: 401 MVMVSGY-VHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLV 459

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           + GF+       AL+  Y +C  V+ A  +F  + ++ D + WN +I    ++     A+
Sbjct: 460 QCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNV-DSVSWNAMISALGQHGHGREAL 518

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
           +LF +M          + + +L AC   G   +G Q
Sbjct: 519 ELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQ 554


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Brachypodium distachyon]
          Length = 742

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/702 (34%), Positives = 372/702 (52%), Gaps = 48/702 (6%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE--GKQIHGYVLKSALESNLS-VC 434
            E+ + L+R M+ +     + T   + + CA+ G  H    + +H    ++ L S +  V 
Sbjct: 85   ESPLILYRRMRRTGVCTDAFTFHFLFKCCAR-GRAHVLLCQMLHAACFRTMLPSAVPLVS 143

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N +I MY        A R FD +   +  +W ++IS    LG +D AW L  + + +R  
Sbjct: 144  NPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLL-RHSPAR-- 200

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             ++I+W  L+SG+   G     +     M S G  P+  +V  +L A  +L+ L +GR  
Sbjct: 201  -NVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSL 259

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H  +   G+     +  +L+DMY K   +  A EVFD +                     
Sbjct: 260  HKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGR----------------- 302

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                           +P   SWN+++ GY   G    A  +   M++     ++VT+ SL
Sbjct: 303  ---------------RPQ--SWNAMIDGYCKLGHVDVARYLFDQMEDR----DLVTFNSL 341

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+G +     RE+L  F+QM++ D++ ++ TM SLL  C  LG L  G+ +H  C++   
Sbjct: 342  ITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHA-CIEQRL 400

Query: 735  IK-DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            ++ D Y+ T L+DMY K G ++ A  VF+  + + + +W+ MI G A  G GK A+  F 
Sbjct: 401  VEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFF 460

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
             +   GFQP+++T+ A+L AC +S L++EG  YF+ M   +NI P IEHY CM+DLLG++
Sbjct: 461  WMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRS 520

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G LDEA D +RTMP +P+A IW ++L +CR+H     A  A+  L KLEP   A Y  + 
Sbjct: 521  GLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLY 580

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+   S +WED  ++R  M+E GVK    +S I +   VH F      HP   EI   + 
Sbjct: 581  NIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMME 640

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             +   +K +GY P T  +  D+DEEEK   LL+H+EK+AI +GL+      P+ +IKN R
Sbjct: 641  EITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLR 700

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            VC DCH+A K +S +  REI +RD +RFHHFR+G CSCND W
Sbjct: 701  VCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 192/404 (47%), Gaps = 16/404 (3%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I    R  +   A+  F  M     +    T++ +L ACA++     G+ +H  V 
Sbjct: 205 WTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVG 264

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAW 482
           +  +  +  +   LI MY++   +  A  VFD++ +     SWN+MI  Y  LG+VDVA 
Sbjct: 265 EKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVAR 324

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            LF++M       D++T+N L++G+   G  +  L L   M+    R +  ++  +L A 
Sbjct: 325 YLFDQMEDR----DLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTAC 380

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             L  L  GR  H  I +  ++ D+Y+GT+L+DMY+K   ++ A  VF  M  R++  W+
Sbjct: 381 ASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWS 440

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-N 661
           ++I+G  F G+   A +    M+ +  +P+ V++ ++++  S      E  +    M+  
Sbjct: 441 AMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLL 500

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC---GGLGL 718
             I P +  +  +I    ++    E++     M    ++PN+   +S+L  C       L
Sbjct: 501 HNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMP---MQPNAVIWASILSACRVHKDANL 557

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
            +N  E H L L+    +DA V   L ++Y  S   + A ++ R
Sbjct: 558 ARNAAE-HLLKLEPD--EDA-VYVQLYNIYIDSRQWEDASQIRR 597



 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 34/284 (11%)

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
           +R+   W+  +  Y S  G   E ++ +  +   G+      +  +L  C +L     G 
Sbjct: 199 ARNVISWTGLISGY-SRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGR 257

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRD------------------------------ 344
            +H  + ++G      L  AL++ Y KC D                              
Sbjct: 258 SLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKL 317

Query: 345 --VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
             V+ A  LF ++ D  D + +N +I   +   +   A+ LF +M+    +A + T+V +
Sbjct: 318 GHVDVARYLFDQMED-RDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSL 376

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L ACA +GA  +G+ +H  + +  +E ++ +   L+ MY +  ++E A+ VF +M   ++
Sbjct: 377 LTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDV 436

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            +W++MI+     G    A   F  M     QP+ +T+  +L+ 
Sbjct: 437 HTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTA 480


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 280/915 (30%), Positives = 443/915 (48%), Gaps = 86/915 (9%)

Query: 206  CLSSVKSKHAQMIK---MGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADW 261
            C +S +  H + I    +G    S+ ++  SL+  Y +  D   A K F     R    W
Sbjct: 68   CAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSW 127

Query: 262  SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
            ++ L  Y   G   Q L E    +  +GV         I+ +C KL    LG ++H  +I
Sbjct: 128  TAMLAVYAQNGCWSQAL-ECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRII 186

Query: 322  KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
              G + D  L  AL++ YG C   +    +FS +      LLW  +I    +N ++E  +
Sbjct: 187  NEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQ-SSVLLWTTMIAGCSQNGQYEEGL 245

Query: 382  KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
             +FR+M     KA   T + M++ C  + A  EG+ I   +L+S   S+  +   LIS+Y
Sbjct: 246  LVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLY 305

Query: 442  SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
             +                                G +D A  L   M     Q D++ WN
Sbjct: 306  GQ-------------------------------CGILDRAKGLLEHM----YQRDVVAWN 330

Query: 502  CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
             +++    +G     + LLR M   GF  N  +   VL+A   L  L  GRE H  +L  
Sbjct: 331  AMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLC 390

Query: 562  GL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
            GL   ++ VG S++ MY K    + A  VF+ M  ++ V+WN++I+       F +A ++
Sbjct: 391  GLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALEL 450

Query: 621  LNQMEEEEIKPD---LVSW---------------------------------NSLVSGYS 644
             + ME E ++ +   L+S                                  NS+V+ Y+
Sbjct: 451  FHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYA 510

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY--RESLKFFIQMQQEDIKPN 702
              G   +A      ++  G+    V W+ +++   Q+++   R + KFF +M+ E IKP 
Sbjct: 511  RCGSLLDAKKAFDSLEEKGL----VAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPG 566

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV-ATGLIDMYSKSGNLKSAREVF 761
              T  S L  C  +  L++G+ +H     +GF++ + V    +I+MY K G+   A+ VF
Sbjct: 567  EVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVF 626

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             +   K L SWN +I+ +A  G+  EA+    E+L  GF PD+ T  ++L    ++GL+E
Sbjct: 627  DQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLE 686

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF-KPDATIWGALLG 880
             G ++F S   D+ + P+     C+VDLL + G+LD A + I   P  + D   W  LL 
Sbjct: 687  RGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLA 746

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
            +C+ +G  +     + R+F+LEP +S ++ ++ NL A   RW D  R+R  M+ + VK  
Sbjct: 747  ACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKE 806

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
               SWI++   VH F +  + HP   EI  +L  L   M++ GYVPDT  V  D++E +K
Sbjct: 807  PGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDK 866

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
             ++L  H+E+LAIV+GLM T+    IRV+KN RVCSDCH A K +S V GREI +RD +R
Sbjct: 867  EEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSR 926

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF+ G+CSC D W
Sbjct: 927  FHHFKHGQCSCGDFW 941



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 169/743 (22%), Positives = 321/743 (43%), Gaps = 83/743 (11%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y +    T A   F    +++   W+  +  Y S  G  +E LE++  +  +G      +
Sbjct: 2   YGKCARVTDALMVFDGISAKNVFSWTMMMAAY-SQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
             I L  C        G ++H+S++  G   ++ +  +L+N YGKC+DV  A K+F  + 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            L D + W  ++ V  +N  W  A++    M     K    T V ++  CAK+     G+
Sbjct: 121 -LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IH  ++   LE +  + N L+ MY            FD MK                  
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGS-------FDDMK------------------ 214

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                 S+F++M     Q  ++ W  +++G   +G Y+  L + R M   G + N  +  
Sbjct: 215 ------SVFSRMG----QSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYM 264

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +++    L  +K G      IL +       + TSL+ +Y +   L  A+ + ++M  R
Sbjct: 265 SMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQR 324

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------------------- 636
           ++VAWN++++     G    A  +L +M+ E    + V++                    
Sbjct: 325 DVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIH 384

Query: 637 ----------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                           NS+++ Y   GQ++ A+ +   M       + V+W ++I+ S+ 
Sbjct: 385 ARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPR----KDDVSWNAVINASVG 440

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY- 739
           N  ++++L+ F  M+ E ++ N  T+ SLL+ CGGL  L+  ++IH      GF  ++  
Sbjct: 441 NSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTA 500

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY--GNGKEAILLFHELLE 797
           V   +++MY++ G+L  A++ F     K L +W+ ++  +A    G G+ A   F E+  
Sbjct: 501 VGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEA 560

Query: 798 TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
            G +P  +TF + L AC     +E G       +    +  ++   + ++++ GK G   
Sbjct: 561 EGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPS 620

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGH-LEYAEIASRRLFK-LEPCNSANYNLMMNL 915
           +A      MP K   + W +L+ +   +GH LE        L +  +P +  + +++  L
Sbjct: 621 DAKLVFDQMPEKCLIS-WNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGL 679

Query: 916 LAMSNRWEDVERLRHSMDEVGVK 938
                    VE  R S+ + G++
Sbjct: 680 SHAGLLERGVEHFRSSIQDHGLE 702


>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269 from
            Arabidopsis thaliana BAC F28A21 gi|T04867 and contains
            multiple PPR PF|01535 repeats. EST gb|AI999742 comes from
            this gene. This gene may be cut off, partial [Arabidopsis
            thaliana]
          Length = 757

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/714 (32%), Positives = 387/714 (54%), Gaps = 36/714 (5%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA ++K G   D ++   L+  Y        A+ +   + D      ++ +I    + 
Sbjct: 36   QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD-PTIYSFSSLIYALTKA 94

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + +  +I +F  M        S  +  + + CA++ AF  GKQIH     S L+ +  V 
Sbjct: 95   KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              +  MY R  ++  A +VFD M D ++ + ++++ +Y   G ++    + ++M SS I+
Sbjct: 155  GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             +I++WN +LSG    G ++  + + + +  LGF P+  +VS VL +V +  +L  GR  
Sbjct: 215  ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            HGY+++ GL  D  V ++++DMY K+  +     +F+         +  + +G C     
Sbjct: 275  HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ--------FEMMEAGVC----- 321

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                                  N+ ++G S  G   +AL +    K   +  NVV+WTS+
Sbjct: 322  ----------------------NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+G  QN    E+L+ F +MQ   +KPN  T+ S+L  CG +  L +G+  H   ++   
Sbjct: 360  IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
            + + +V + LIDMY+K G +  ++ VF     K L  WN ++ GF+++G  KE + +F  
Sbjct: 420  LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            L+ T  +PD I+FT+LL+AC   GL +EGWKYF  MS +Y I P +EHYSCMV+LLG+AG
Sbjct: 480  LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             L EA+D I+ MPF+PD+ +WGALL SCR+  +++ AEIA+ +LF LEP N   Y L+ N
Sbjct: 540  KLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSN 599

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A    W +V+ +R+ M+ +G+K     SWIQ+   V+   A    HP   +I  ++  
Sbjct: 600  IYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDE 659

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            +  EM+K G+ P+      D++E+E+ ++L  H+EKLA+V+GL+ T    P++V
Sbjct: 660  ISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQV 713



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 213/469 (45%), Gaps = 40/469 (8%)

Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
           V+  +   G+I  S +L  + K+C +L AF +G ++H      G D D  ++ ++ + Y 
Sbjct: 103 VFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYM 162

Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA------ 394
           +C  +  A K+F  +SD +D +  + ++    R    E  +++  EM+ S  +A      
Sbjct: 163 RCGRMGDARKVFDRMSD-KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221

Query: 395 ----------ISRTIVKMLQACAKVG-------------------AFHEGKQIHGYVLKS 425
                       +  V M Q    +G                     + G+ IHGYV+K 
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ 281

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
            L  +  V + +I MY ++  +     +F+  +       N+ I+  +  G VD A  +F
Sbjct: 282 GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMF 341

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
                  ++ ++++W  +++G   +G     L L R MQ  G +PN  ++  +L A   +
Sbjct: 342 ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNI 401

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
             L +GR +HG+ +R  L  +++VG++L+DMY K   +  +Q VF+ M  +N+V WNSL+
Sbjct: 402 AALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GI 664
           +G+   G       +   +    +KPD +S+ SL+S     G + E       M    GI
Sbjct: 462 NGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGI 521

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            P +  ++ +++   +    +E+     +M  E   P+S    +LL +C
Sbjct: 522 KPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWGALLNSC 567



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 41/359 (11%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE------------ 359
           +G  +H  +IK+G   D  +  A+++ YGK   V     LF++   +E            
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329

Query: 360 -----DDLL-----------------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
                D  L                 W  II    +N K   A++LFREMQ +  K    
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           TI  ML AC  + A   G+  HG+ ++  L  N+ V + LI MY++  ++ L+  VF+ M
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              NL  WNS+++ ++  G      S+F  +  +R++PD I++  LLS     G      
Sbjct: 450 PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509

Query: 518 TLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV-GTSLMD 575
              + M +  G +P     S ++  +     L+   E++  I     + D  V G  L  
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ---EAYDLIKEMPFEPDSCVWGALLNS 566

Query: 576 MYVKN--DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
             ++N  D  + A E   +++  N   +  L + Y  KG++     + N+ME   +K +
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 121/274 (44%), Gaps = 7/274 (2%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +      G ++ E LE++ E+   GV      +  +L  C  + A   G   H   
Sbjct: 356 WTSIIAGCAQNGKDI-EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++     +VH+  AL++ Y KC  +  +  +F+ +   ++ + WN ++     + K +  
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT-KNLVCWNSLMNGFSMHGKAKEV 473

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLIS 439
           + +F  +  +  K    +   +L AC +VG   EG K       +  ++  L   +C+++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533

Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           +  R  KL+ A  +   M  + +   W ++++S      VD+A     K+    ++P+  
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL--FHLEPENP 591

Query: 499 TWNCLLSGHF-THGSYQNVLTLLRGMQSLGFRPN 531
               LLS  +   G +  V ++   M+SLG + N
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/768 (31%), Positives = 378/768 (49%), Gaps = 112/768 (14%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            +Q+H       +  N+ V N LI  YS    L+ A  +FD M   +  SW+ M+  +  +
Sbjct: 98   RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157

Query: 476  G-------------------------------------------------YVDVAWSLFN 486
            G                                                  ++ A  LF+
Sbjct: 158  GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFD 217

Query: 487  KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            KM     + D++TW  ++ G+   G     L L   M+  G  P+  ++  V+ A  +L 
Sbjct: 218  KMQ----ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLG 273

Query: 547  LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
             +   R    YI R     D+ +GT+++DMY K  C+++A+E+FD M+ +N+++W+++I+
Sbjct: 274  AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIA 333

Query: 607  GYCFKGLFVNAKKMLNQMEEEEIKPD---------------------------------- 632
             Y + G    A  +   M    + PD                                  
Sbjct: 334  AYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQ 393

Query: 633  -LVSWNSLVSGYSIWGQSKEAL---------------VIIHHMKNSGIYPNVV-TWTSLI 675
             L+  N LV  YS +    +A                V++      G Y N   T+  LI
Sbjct: 394  NLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELI 453

Query: 676  SGSLQNENY--------RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
                + +NY         ESL  F +M++E + P+   M +++  C  LG +   + I  
Sbjct: 454  RCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDD 513

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
               +  F  D  + T +IDM++K G ++SARE+F +   K + SW+ MI  +  +G G++
Sbjct: 514  YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 573

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF  +L +G  P+ IT  +LL AC ++GLVEEG ++F  M  DY++   ++HY+C+V
Sbjct: 574  ALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVV 633

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG LDEA   I +M  + D  +WGA LG+CR H  +  AE A+  L +L+P N  
Sbjct: 634  DLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPG 693

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            +Y L+ N+ A + RWEDV + R  M +  +K +  W+WI++D   H FS     HP + E
Sbjct: 694  HYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKE 753

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY  L  L ++++ +GYVPDT  V  D+DEE K  +L SH+EKLAI +GL+ T    PIR
Sbjct: 754  IYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIR 813

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +IKN RVC DCHT  K +S + GR I +RD  RFHHF+EG CSC D W
Sbjct: 814  IIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 213/491 (43%), Gaps = 52/491 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y++  +   A   F     R    W+  +  Y   G +  E L ++ ++  +GV+
Sbjct: 198 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECG-KANESLVLFEKMREEGVV 256

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  ++  C KL A      +   + ++ F  DV L  A+++ Y KC  VESA ++
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + ++ + W+ +I     + +   A+ LFR M  S       T+  +L AC     
Sbjct: 317 FDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRN 375

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
             + +Q+H       +  NL V N L+  YS    L+ A  +FD M   +  SW+ M+  
Sbjct: 376 LTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 435

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWN-CLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
           +  +G     +  F ++     +PD  T   C        G+    L L   M+  G  P
Sbjct: 436 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFC--------GNANESLVLFDKMREEGVVP 487

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           +  ++  V+ A  +L  +   R    YI R     D+ +GT+++DM+ K  C+++A+E+F
Sbjct: 488 DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 547

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
           D M+ +N+++W+++I+ Y                                 GY   GQ +
Sbjct: 548 DRMEEKNVISWSAMIAAY---------------------------------GYH--GQGR 572

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-----DIKPNSTT 705
           +AL +   M  SGI PN +T  SL+          E L+FF  M ++     D+K + T 
Sbjct: 573 KALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVK-HYTC 631

Query: 706 MSSLLQTCGGL 716
           +  LL   G L
Sbjct: 632 VVDLLGRAGRL 642



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 18/292 (6%)

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           + A+   R L   R+ H     +G+  ++ V   L+  Y     L +A  +FD M  R+ 
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN--------------SLVSGYS 644
           V+W+ ++ G+   G ++N      ++     +PD  +                +LV  Y 
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYV 204

Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              + ++A  +   M+      ++VTWT +I G  +     ESL  F +M++E + P+  
Sbjct: 205 KCREIEDARFLFDKMQER----DLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKV 260

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            M +++  C  LG +   + I     +  F  D  + T +IDMY+K G ++SARE+F + 
Sbjct: 261 AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRM 320

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
             K + SW+ MI  +  +G G++A+ LF  +L +G  PD IT  +LL AC N
Sbjct: 321 EEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACIN 372


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE
            2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 258/820 (31%), Positives = 424/820 (51%), Gaps = 81/820 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL- 358
            +LK C +   F LG  VHA LI+   + D  L  +L++ Y K  D   A  +F  +    
Sbjct: 68   LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 359  -EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              D + W+ ++     N +  +AIK+F E               +++AC+       G+ 
Sbjct: 128  KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 418  IHGYVLKSA-LESNLSVCNCLISMYSRN-NKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
              G+++K+   ES++ V   LI M+ +  N  E A +VFD M + N              
Sbjct: 188  TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN-------------- 233

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                 ++TW  +++     G  +  +     M   GF  +  ++
Sbjct: 234  ---------------------VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTL 272

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDN 592
            S V  A  EL  L  G++ H + +R+GL  D  V  SL+DMY K   +  + + ++VFD 
Sbjct: 273  SSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDR 330

Query: 593  MKNRNIVAWNSLISGYCFK-GLFVNAKKMLNQM-EEEEIKPDLVSWNSLVS--------- 641
            M++ ++++W +LI+GY     L   A  + ++M  +  ++P+  +++S            
Sbjct: 331  MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390

Query: 642  -GYSIWGQS-KEALVIIHHMKNSGIY--------------------PNVVTWTSLISGSL 679
             G  + GQ+ K  L     + NS I                      N+V++ + + G+ 
Sbjct: 391  VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450

Query: 680  QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
            +N N+ ++ K   ++ + ++  ++ T +SLL     +G ++ G++IH   +K G   +  
Sbjct: 451  RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            V   LI MYSK G++ +A  VF    N+ + SW  MI GFA +G     +  F++++E G
Sbjct: 511  VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             +P+ +T+ A+L+AC + GLV EGW++F+SM  D+ I P +EHY+CMVDLL +AG L +A
Sbjct: 571  VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
            ++FI TMPF+ D  +W   LG+CR+H + E  ++A+R++ +L+P   A Y  + N+ A +
Sbjct: 631  FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
             +WE+   +R  M E  +      SWI++   +H F      HP   +IY EL  L++E+
Sbjct: 691  GKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750

Query: 980  KKLGYVPDTRCVYQDI----DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
            K+ GYVPDT  V   +    DE EK ++L  H+EK+A+ +GL+ T    P+RV KN RVC
Sbjct: 751  KRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVC 810

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH A KY+S V GREI LRD  RFHHF++G+CSCND W
Sbjct: 811  GDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 211/468 (45%), Gaps = 76/468 (16%)

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           S T   +L++C +   F  GK +H  +++  +E +  + N LIS+YS++     A  VF+
Sbjct: 62  SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFE 121

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
           +M+                                   + D+++W+ +++ +  +G   +
Sbjct: 122 TMRRFG--------------------------------KRDVVSWSAMMACYGNNGRELD 149

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLM 574
            + +      LG  PN    + V++A +    +  GR + G++++ G  + D+ VG SL+
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209

Query: 575 DMYVKND-CLQNAQEVFDNMKNRNIVAWNSLIS-----GYCFKGL----------FVNAK 618
           DM+VK +   +NA +VFD M   N+V W  +I+     G+  + +          F + K
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269

Query: 619 KMLN-------QMEEEEIKPDLVSWN-----------SLVSGY---SIWGQSKEALVIIH 657
             L+       ++E   +   L SW            SLV  Y   S  G   +   +  
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFD 329

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENY-RESLKFFIQM-QQEDIKPNSTTMSSLLQTCGG 715
            M++     +V++WT+LI+G ++N N   E++  F +M  Q  ++PN  T SS  + CG 
Sbjct: 330 RMEDH----SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
           L   + GK++     K G   ++ VA  +I M+ KS  ++ A+  F   + K L S+N  
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
           + G     N ++A  L  E+ E      A TF +LL+   N G + +G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 20/333 (6%)

Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQM--IKMGKIWNS--------DDMVKSLIFHY 237
           L  + SGF    E++KF  LSSV S  A++  + +GK  +S        DD+  SL+  Y
Sbjct: 258 LDMVLSGF----ESDKFT-LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMY 312

Query: 238 LEF---GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRS 294
            +    G      K F      S   W++ +  Y        E + ++ E+  +G +  +
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPN 372

Query: 295 RI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
               +   K C  L    +G +V     KRG   +  +  ++++ + K   +E A + F 
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
            +S+ ++ + +N  +    RN  +E A KL  E+        + T   +L   A VG+  
Sbjct: 433 SLSE-KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           +G+QIH  V+K  L  N  VCN LISMYS+   ++ A+RVF+ M++ N+ SW SMI+ + 
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             G+       FN+M    ++P+ +T+  +LS 
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 130/260 (50%), Gaps = 16/260 (6%)

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           ILR+    DL    S +D+  +           D ++  + V ++SL+   C +      
Sbjct: 33  ILRHLNAGDLRGAVSALDLMAR-----------DGIRPMDSVTFSSLLKS-CIRARDFRL 80

Query: 618 KKMLN-QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
            K+++ ++ E +I+PD V +NSL+S YS  G S +A  +   M+  G   +VV+W+++++
Sbjct: 81  GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSWSAMMA 139

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG-FI 735
               N    +++K F++  +  + PN    +++++ C     +  G+      +K G F 
Sbjct: 140 CYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFE 199

Query: 736 KDAYVATGLIDMYSKSGN-LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
            D  V   LIDM+ K  N  ++A +VF K +   + +W  MI      G  +EAI  F +
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259

Query: 795 LLETGFQPDAITFTALLAAC 814
           ++ +GF+ D  T +++ +AC
Sbjct: 260 MVLSGFESDKFTLSSVFSAC 279



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 4/154 (2%)

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKP-NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           LI   L   + R ++     M ++ I+P +S T SSLL++C      + GK +H   ++ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVF---RKSANKTLASWNCMIMGFAIYGNGKEAI 789
               D+ +   LI +YSKSG+   A +VF   R+   + + SW+ M+  +   G   +AI
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 790 LLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
            +F E LE G  P+   +TA++ AC NS  V  G
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic [Vitis vinifera]
          Length = 762

 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/613 (36%), Positives = 345/613 (56%), Gaps = 40/613 (6%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P    +N L+    +  +    L L   M   G +P+  +   V++A  E  +  +G   
Sbjct: 158  PPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLV 217

Query: 555  HGYILRNGLDYDLYVGTSLM-------------------------------DMYVKNDCL 583
            H +++++G + D Y+ +SL+                               D YVK+  +
Sbjct: 218  HTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEM 277

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             +A+ VFD M  R++++WN++I+GY   G    AK++ ++M E     +LVSWNS+++G+
Sbjct: 278  GHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPER----NLVSWNSMLAGF 333

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
               G  ++A  +   M       +VV+W S+++   Q     E+L  F QM+   +KP  
Sbjct: 334  VKCGNVEDAFGLFSEMPCR----DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTE 389

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             T+ SLL  C  LG L  G  +H     N    ++ V T L+DMY+K G +  A +VF  
Sbjct: 390  ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 449

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +K + +WN +I G AI+GN KEA  LF E+ E G +P+ ITF A+L+AC ++G+V+EG
Sbjct: 450  MESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEG 509

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             K  D MS+ Y I P +EHY C++DLL +AG+L+EA + I TMP +P+ +  GALLG CR
Sbjct: 510  QKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCR 569

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            IHG+ E  E+  +RL  L+PC+S  Y L+ N+ A + +W+D  ++R+ M   G+  V   
Sbjct: 570  IHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 629

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK-LGYVPDTRCVYQDIDEEEKGK 1002
            S I++  +VH F A    HP + +IY +L  + + +K  +GY  DT  V  D++EE+K  
Sbjct: 630  SVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEH 689

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLAI YGL+   S+  IR++KN RVC DCH   K +S V GREI +RD  RFH
Sbjct: 690  ALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFH 749

Query: 1063 HFREGECSCNDCW 1075
            HF +GECSC D W
Sbjct: 750  HFEDGECSCLDFW 762



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 250/552 (45%), Gaps = 67/552 (12%)

Query: 165 NSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIW 224
           +S++ +P  L  PP++                 L+  N  + L  +K  HAQ+I      
Sbjct: 81  SSMSRTPNPLTNPPSNPQ--------------ILSLFNPCKTLRHLKQVHAQIITH---H 123

Query: 225 NS--DDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW 282
           NS       + +     F  F + AK  F +         + L    S      E L ++
Sbjct: 124 NSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLY 183

Query: 283 GELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
             +   G+         ++K C +    W G+ VH  ++K GF+ D ++  +L++ Y   
Sbjct: 184 HTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANG 243

Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
           +D+ +A +LF+  S   D + WN +I   +++ +  +A  +F  M       + R ++  
Sbjct: 244 KDLGAAKQLFNLCS-ARDVVSWNAMIDGYVKHVEMGHARMVFDRM-------VCRDVISW 295

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
                                           N +I+ Y+   K++ A R+FD M + NL
Sbjct: 296 --------------------------------NTMINGYAIVGKIDEAKRLFDEMPERNL 323

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            SWNSM++ +   G V+ A+ LF++M       D+++WN +L+ +   G     L L   
Sbjct: 324 VSWNSMLAGFVKCGNVEDAFGLFSEMPCR----DVVSWNSMLACYAQCGKPNEALALFDQ 379

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M+++G +P  ++V  +L A   L  L  G   H YI  N ++ +  VGT+L+DMY K   
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 439

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           +  A +VF+ M++++++AWN++I+G    G    A+++  +M+E  ++P+ +++ +++S 
Sbjct: 440 ISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSA 499

Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S  G   E   ++  M +S GI P V  +  +I    +     E+++    M  E   P
Sbjct: 500 CSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPME---P 556

Query: 702 NSTTMSSLLQTC 713
           N + + +LL  C
Sbjct: 557 NPSALGALLGGC 568


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 270/859 (31%), Positives = 415/859 (48%), Gaps = 114/859 (13%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            ++HA LI  G D  + L   L++ Y  C     A ++F E     +   WN +I   + +
Sbjct: 29   KLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHH-RNIFTWNTMIRALVSS 87

Query: 375  EKWENAIKLFREMQFSSAKAISRTIV---------------------------------- 400
             +  +A KLF EM      ++S T +                                  
Sbjct: 88   SRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPF 147

Query: 401  ---KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
                +++AC  +G      Q+H  V K        + N ++ MY +   ++LA  VF  +
Sbjct: 148  SFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDI 207

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            +  +L  WNSMI  Y+ +     A  +FN+M     + D ++WN L+S    HG     L
Sbjct: 208  ERPSLFCWNSMIYGYSQMYGPYKALQIFNRMP----ERDEVSWNTLISIFSQHGFGVQCL 263

Query: 518  TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
             +   M + GF PN  +   VL A      LK+G   H  ILR     DL  G  L+DMY
Sbjct: 264  AMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMY 323

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI-------- 629
             K  CL  A+ VF +++  + ++WNSLI+G    GL  +A  + NQM    +        
Sbjct: 324  AKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILP 383

Query: 630  -------KPDLVSWNSLVSGYSI--------------------WGQSKEALVIIHHM--- 659
                    PD  S   L+ GY+I                     G + +A ++   M   
Sbjct: 384  TILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR 443

Query: 660  -------------------KNSGIYP-----NVVTWTSLISGSLQNENYRESLKFFIQMQ 695
                               K  G +      N+VTW S++S  +QN    E LK ++ M+
Sbjct: 444  NTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMR 503

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
               ++P+  T ++ ++ C  L +++ G ++     K G   +  VA  ++ MYS+ G +K
Sbjct: 504  SNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIK 563

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             A+  F    +K L SWN M+  FA  G G + I  F ++L+T  +P+ I++ ++L+ C 
Sbjct: 564  EAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCS 623

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + GLV EG  YFDSM+  + I PT EH+SCMVDLLG+AG L++A D I  MPFKP+AT+W
Sbjct: 624  HMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVW 683

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
             ALLGSCR+H  L  AE A+++L +L+   S  Y L+ N+ + S   ++V  +R  M   
Sbjct: 684  SALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVK 743

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG-YVPDTRCVYQD 994
            G+++    SWI++D  VHVF+ +   HP   E+Y +L  ++  ++  G Y+     V   
Sbjct: 744  GIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYIT----VESS 799

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
            +   +K      H+EKLA  +GL+   S  PI V+KN RVC DCH   K +SLV  RE+ 
Sbjct: 800  VHRSKK-----YHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELI 854

Query: 1055 LRDGARFHHFREGECSCND 1073
            +RDG RFHHF++G CSC D
Sbjct: 855  MRDGYRFHHFKDGICSCKD 873



 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 232/485 (47%), Gaps = 14/485 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S+I+ Y +      A + F     R    W++ +  +   G  VQ  L ++ E+  +G  
Sbjct: 217 SMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQ-CLAMFVEMCNQG-- 273

Query: 292 FRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
           F    +T   +L  C        G  +HA +++     D+     L++ Y KC  ++ A 
Sbjct: 274 FSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAK 333

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           ++F  + +  D + WN +I   +     E+A+ LF +M+ SS       +  +L  C+  
Sbjct: 334 RVFKSLRE-HDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGP 392

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
                G+ +HGY +KS + S+  V N +I+MY++    + A  VF  M   N  SW +MI
Sbjct: 393 DYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMI 452

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           ++++  G +  A   F+ M     + +I+TWN +LS +  +G  +  L L   M+S G +
Sbjct: 453 TAFSRSGDIGKARGYFDMMP----ERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           P+  + +  ++A  +L ++K G +   +  + GL  ++ V  S++ MY +   ++ A+  
Sbjct: 509 PDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNT 568

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           FD++ ++++++WN++++ +   GL +        M + E KP+ +S+ S++SG S  G  
Sbjct: 569 FDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLV 628

Query: 650 KEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            E       M    GI P    ++ ++   L      E  K  I+      KPN+T  S+
Sbjct: 629 AEGKHYFDSMTRVFGISPTNEHFSCMVD-LLGRAGLLEQAKDLIEGMP--FKPNATVWSA 685

Query: 709 LLQTC 713
           LL +C
Sbjct: 686 LLGSC 690



 Score =  140 bits (352), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 233/536 (43%), Gaps = 62/536 (11%)

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
           H  +++H  ++ S L+S+L + N L+ MYS       A +VF      N+ +WN+MI + 
Sbjct: 25  HIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRAL 84

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG----SYQNVLTLLRGMQSLGF 528
                +  A  LF++M   R++ D ++W  ++SG+  +G    S++    ++R     G 
Sbjct: 85  VSSSRMSDAEKLFDEM-PVRVK-DSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGK 142

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
             +  S + V++A   L   +   + H  + + G   +  +  S++ MYVK   +  A+ 
Sbjct: 143 NYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VF +++  ++  WNS+I GY        A ++ N+M E     D VSWN+L+S +S  G 
Sbjct: 203 VFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPER----DEVSWNTLISIFSQHGF 258

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             + L +   M N G  PN +T+ S++S                                
Sbjct: 259 GVQCLAMFVEMCNQGFSPNFMTYGSVLSA------------------------------- 287

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
               C     L+ G  +H   L+     D     GLIDMY+K G L  A+ VF+      
Sbjct: 288 ----CASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHD 343

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK-----NSGLVEEG 823
             SWN +I G   +G G++A++LF+++  +    D      +L  C      ++G +  G
Sbjct: 344 HISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHG 403

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
           +     M +   +   I      + +  K G  D+A    R MP + +   W A++ +  
Sbjct: 404 YTIKSGMGSSAPVGNAI------ITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFS 456

Query: 884 IHGHLEYAEIASRRLFKLEP-CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
             G +  A    R  F + P  N   +N M++    +   E+  +L  SM   GV+
Sbjct: 457 RSGDIGKA----RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15930 [Vitis vinifera]
          Length = 724

 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/732 (33%), Positives = 379/732 (51%), Gaps = 75/732 (10%)

Query: 344  DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            D+E A  +F  +    +  +WN +I    R     +A+ ++ EM          T   +L
Sbjct: 68   DMEYARMVFDTMPG-PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126

Query: 404  QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            +   +  A   G+++H +++K    SN+ V N LI +YS +                   
Sbjct: 127  KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLS------------------- 167

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                        G V VA  +F++ +      D++TWN ++SG+     +   + L   M
Sbjct: 168  ------------GEVSVARGVFDRSSKG----DVVTWNVMISGYNRSKQFDESMKLFDEM 211

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            + +   P+  ++  VL A ++L+ L  G+  H Y+    ++    +  +L+DMY     +
Sbjct: 212  ERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDM 271

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
              A  +FDNMK+R                                   D++SW ++V+G+
Sbjct: 272  DTALGIFDNMKSR-----------------------------------DVISWTAIVTGF 296

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
            +  GQ   A      M       + V+WT++I G LQ   ++E L  F +MQ  +IKP+ 
Sbjct: 297  TNLGQVGLARNYFDKMPER----DFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDE 352

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             TM S+L  C  LG L+ G+ I     KN    D++V   LIDMY   GN++ A  +F  
Sbjct: 353  FTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNA 412

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              ++   SW  +I G AI G G+EA+ +F ++L+    PD +T   +L AC +SG+V++G
Sbjct: 413  MPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKG 472

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             K+F  M+T + I P + HY CMVDLLG+AG+L EA + I+ MP KP++ +WG+LLG+CR
Sbjct: 473  KKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACR 532

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +H   E AE+A++++ +LEP N A Y L+ N+ A  NRWE +  +R  M + G+K     
Sbjct: 533  VHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGC 592

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I+++  VH F A    HP + EIY +L  +  ++K  GY PDT  V+ DI EEEK   
Sbjct: 593  SLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESA 652

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            +  H+EKLAI +GL+ +     IR++KN R+C DCH  AK +S V  RE+ +RD  RFHH
Sbjct: 653  VYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHH 712

Query: 1064 FREGECSCNDCW 1075
            FR G CSC D W
Sbjct: 713  FRHGSCSCKDYW 724



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 269/550 (48%), Gaps = 27/550 (4%)

Query: 170 SPTSLALPPT--DTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD 227
           S T+L+ PPT   +L +   LS I +  C        + ++ +K  H+Q I  G I  S+
Sbjct: 3   SATTLSPPPTHLPSLPQTPPLSLIKT--C--------KSMAQLKQIHSQTICTGLI--SN 50

Query: 228 DMVKSLIFHYL---EFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
            +V + I  +    E GD   A   F      ++  W++ ++ Y   G      + ++ E
Sbjct: 51  PIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCP-NSAVSMYCE 109

Query: 285 LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           +  +GV+        +LK  T+  A   G E+H  ++K GF  +V ++ AL++ Y    +
Sbjct: 110 MLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGE 169

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           V  A  +F   S   D + WN +I    R+++++ ++KLF EM+       S T+V +L 
Sbjct: 170 VSVARGVFDRSSK-GDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLS 228

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           AC+K+   + GK++H YV    +E    + N LI MY+    ++ A  +FD+MK  ++ S
Sbjct: 229 ACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVIS 288

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           W ++++ +T LG V +A + F+KM     + D ++W  ++ G+     ++ VL+L R MQ
Sbjct: 289 WTAIVTGFTNLGQVGLARNYFDKMP----ERDFVSWTAMIDGYLQVNRFKEVLSLFREMQ 344

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
           +   +P+  ++  +L A   L  L+ G     YI +N +  D +VG +L+DMY     ++
Sbjct: 345 AANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVE 404

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            A  +F+ M +R+ ++W ++I G    G    A  M +QM +  I PD V+   ++   +
Sbjct: 405 KAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACT 464

Query: 645 IWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             G   +       M    GI PNV  +  ++    +  + +E+ +    M    +KPNS
Sbjct: 465 HSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMP---VKPNS 521

Query: 704 TTMSSLLQTC 713
               SLL  C
Sbjct: 522 IVWGSLLGAC 531



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS--GNLKSAREVFRKSA 765
           SL++TC  +  L   K+IH   +  G I +  V   +I    K   G+++ AR VF    
Sbjct: 24  SLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
                 WN MI G++  G    A+ ++ E+LE G  PD  T+  LL        V+ G +
Sbjct: 81  GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140

Query: 826 YFD 828
             D
Sbjct: 141 LHD 143


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 666

 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/700 (32%), Positives = 377/700 (53%), Gaps = 54/700 (7%)

Query: 384  FREMQFSSAKAI------SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            F+ + FS+ K I       +T++K+  +   + +     Q+HG VL+S    +  V   L
Sbjct: 13   FKPVDFSAEKNIPTSKLPQKTVLKLFDS-KSITSLQYLTQLHGLVLRSGHFQDHYVSGAL 71

Query: 438  ISMYSRNN--KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            +  Y+  +    + A +VF S+ + N+  WN                             
Sbjct: 72   LKCYANPHFSNFDFALKVFSSIPNPNVFIWN----------------------------- 102

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
             I+   CL +       Y        G   +  RPN  +   + +A +  + ++ GR+ H
Sbjct: 103  -IVIKGCLENNKLFKAIY------FYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIH 155

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            G+++++G+  D+++ ++ + MY     L++A+++F + ++ ++V WN++I GY   G+  
Sbjct: 156  GHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLE 214

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
             AK +  QM  + I     SWN +++G +  G   +A  +   M       + ++W+S++
Sbjct: 215  AAKGLFAQMPVKNIG----SWNVMINGLAKGGNLGDARKLFDEMSER----DEISWSSMV 266

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
             G +    Y+E+L+ F QMQ+E+ +P    +SS+L  C  +G +  G+ +H    +N   
Sbjct: 267  DGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIK 326

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             DA + T L+DMY+K G L    EVF +   + + +WN MI G AI+G  ++A+ LF +L
Sbjct: 327  LDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKL 386

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
             E   +P+ IT   +L AC ++G V++G + F +M   Y + P +EHY CMVDLLG++G 
Sbjct: 387  QEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGL 446

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
              EA D I +MP KP+A +WGALLG+CRIHG+ + AE   + L +LEP NS  Y L+ N+
Sbjct: 447  FSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNI 506

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A   R++DV ++R  M + G+K+V   S + ++  VH F      HP   EIY +L  +
Sbjct: 507  YAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKII 566

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
               ++  G+ PDT  V  DIDEEEK   +  H+EKLAI +GL+ T     I ++KN RVC
Sbjct: 567  KERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVC 626

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH+A K +S +  REI +RD  R+HHF+ G CSC D W
Sbjct: 627  DDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 203/430 (47%), Gaps = 36/430 (8%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCR--DVESANKLFSEVSDLEDDLLWNEIIMVK 371
            ++H  +++ G   D ++  AL+  Y      + + A K+FS + +  +  +WN +I   
Sbjct: 50  TQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPN-PNVFIWNIVIKGC 108

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           L N K   AI  +  M    A+    T   + +AC+   A  EG+QIHG+V+K  + S++
Sbjct: 109 LENNKLFKAIYFYGRMVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDV 167

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            + +  I MY+   +LE A ++F S  + ++  WN+MI  Y   G ++ A  LF +M   
Sbjct: 168 HIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVK 226

Query: 492 RI---------------------------QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
            I                           + D I+W+ ++ G+ + G Y+  L + + MQ
Sbjct: 227 NIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQ 286

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
               RP    +S VL A + +  +  GR  H Y+ RN +  D  +GT+L+DMY K   L 
Sbjct: 287 REETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLD 346

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
              EVF+ MK R I  WN++I G    G   +A ++ ++++E  +KP+ ++   +++  +
Sbjct: 347 MGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACA 406

Query: 645 IWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             G   + L I   M+   G+ P +  +  ++    ++  + E+      M    +KPN+
Sbjct: 407 HAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP---MKPNA 463

Query: 704 TTMSSLLQTC 713
               +LL  C
Sbjct: 464 AVWGALLGAC 473



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 159/332 (47%), Gaps = 39/332 (11%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           ++N   K  ++  A KLF E+S+  D++ W+ ++   +   +++ A+++F++MQ    + 
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSE-RDEISWSSMVDGYISAGRYKEALEIFQQMQREETRP 292

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               +  +L AC+ +GA  +G+ +H Y+ +++++ +  +   L+ MY++  +L++   VF
Sbjct: 293 GRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVF 352

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           + MK+  + +WN+MI      G  + A  LF+K+   R++P+ IT               
Sbjct: 353 EEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT--------------- 397

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
            ++ +L      GF   G            LR+ +  RE +      G+D +L     ++
Sbjct: 398 -LVGVLTACAHAGFVDKG------------LRIFQTMREFY------GVDPELEHYGCMV 438

Query: 575 DMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           D+  ++     A+++ ++M  + N   W +L+      G F  A+++   +   E++P  
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL--LELEPQN 496

Query: 634 VSWNSLVSG-YSIWGQSKEALVIIHHMKNSGI 664
                L+S  Y+  G+  +   I   MK+ GI
Sbjct: 497 SGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGI 528



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 11/278 (3%)

Query: 207 LSSVKSKHAQM-IKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L + K   AQM +K    WN   M+  L     + G+   A K F     R    WSS +
Sbjct: 213 LEAAKGLFAQMPVKNIGSWNV--MINGLA----KGGNLGDARKLFDEMSERDEISWSSMV 266

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
           + Y S  G  +E LE++ ++  +       IL+ +L  C+ + A   G  VHA L +   
Sbjct: 267 DGYIS-AGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSI 325

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
             D  L  AL++ Y KC  ++   ++F E+ + E    WN +I     + + E+A++LF 
Sbjct: 326 KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE-IFTWNAMIGGLAIHGRAEDALELFS 384

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRN 444
           ++Q    K    T+V +L ACA  G   +G +I   + +   ++  L    C++ +  R+
Sbjct: 385 KLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRS 444

Query: 445 NKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
                A  + +SM    N + W +++ +    G  D+A
Sbjct: 445 GLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLA 482


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Glycine max]
          Length = 780

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 253/776 (32%), Positives = 397/776 (51%), Gaps = 81/776 (10%)

Query: 304  CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG--KCRDVESANKLFSEVSDLEDD 361
            CT  M      ++HA +++     D +    L+  Y    C  +  A  +F+++    + 
Sbjct: 82   CTNTMQL---KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQ-PNL 137

Query: 362  LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHG 420
              WN +I     +     +  +F  M  S ++  ++ T   + +A +++   H G  +HG
Sbjct: 138  YCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHG 197

Query: 421  YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
             V+K++L S+L + N LI+ Y  +   +LA RVF +M   ++ SWN+MI+++   G  D 
Sbjct: 198  MVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDK 257

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            A  LF +M    ++P++IT                                   +  VL 
Sbjct: 258  ALLLFQEMEMKDVKPNVIT-----------------------------------MVSVLS 282

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
            A  +   L++GR    YI  NG    L +  +++DMYVK  C+ +A+++F+ M  ++IV+
Sbjct: 283  ACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVS 342

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
            W +++ G+   G +  A  + + M  +       +WN+L+S Y   G+ + AL + H M+
Sbjct: 343  WTTMLDGHAKLGNYDEAHCIFDAMPHKWT----AAWNALISAYEQNGKPRVALSLFHEMQ 398

Query: 661  NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
             S                                  +D KP+  T+   L     LG + 
Sbjct: 399  LS----------------------------------KDAKPDEVTLICALCASAQLGAID 424

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             G  IH    K+    + ++AT L+DMY+K GNL  A EVF     K +  W+ MI   A
Sbjct: 425  FGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALA 484

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
            +YG GK A+ LF  +LE   +P+A+TFT +L AC ++GLV EG + F+ M   Y I+P I
Sbjct: 485  MYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQI 544

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            +HY C+VD+ G+AG L++A  FI  MP  P A +WGALLG+C  HG++E AE+A + L +
Sbjct: 545  QHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLE 604

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            LEPCN   + L+ N+ A +  WE V  LR  M +  VK     S I ++ IVH F     
Sbjct: 605  LEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDN 664

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS-HTEKLAIVYGLMK 1019
             HP + +IY +L  +  + K +GY PD   + Q  +E+   +  L+ H+EKLAI +GL+ 
Sbjct: 665  SHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLIS 724

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            T S  PIR++KN R+C DCH  AK +S +  R+I LRD  RFHHFR G+CSC D W
Sbjct: 725  TASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 207/459 (45%), Gaps = 10/459 (2%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  Y S     Q  L     LH             + K  ++L    LG  +H  +
Sbjct: 140 WNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMV 199

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           IK     D+ +  +L+NFYG     + A+++F+ +   +D + WN +I         + A
Sbjct: 200 IKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPG-KDVVSWNAMINAFALGGLPDKA 258

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           + LF+EM+    K    T+V +L ACAK      G+ I  Y+  +    +L + N ++ M
Sbjct: 259 LLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDM 318

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y +   +  A  +F+ M + ++ SW +M+  +  LG  D A  +F+ M           W
Sbjct: 319 YVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTA----AW 374

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           N L+S +  +G  +  L+L   MQ S   +P+  ++   L A  +L  + +G   H YI 
Sbjct: 375 NALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIK 434

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           ++ ++ + ++ TSL+DMY K   L  A EVF  ++ +++  W+++I      G    A  
Sbjct: 435 KHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALD 494

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGS 678
           + + M E  IKP+ V++ +++   +  G   E   +   M+   GI P +  +  ++   
Sbjct: 495 LFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIF 554

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            +     ++  F  +M    I P +    +LL  C   G
Sbjct: 555 GRAGLLEKAASFIEKMP---IPPTAAVWGALLGACSRHG 590


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 821

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 249/796 (31%), Positives = 408/796 (51%), Gaps = 76/796 (9%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +HA +IK     +  L   L+  Y     +  A  +F + S L +  + N +I   LRN+
Sbjct: 66   IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCS-LPETAVCNAMIAGFLRNQ 124

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +     +LFR M     +  S T +  L+AC  +     G +I    ++     +L V +
Sbjct: 125  QHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGS 184

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             +++   +   L  A +VFD M                                    + 
Sbjct: 185  SMVNFLVKRGYLADAQKVFDGMP-----------------------------------EK 209

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            D++ WN ++ G+   G +   + +   M   G RP+  +++ +L+A  +  L K G  +H
Sbjct: 210  DVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAH 269

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
             Y+L  G+  D++V TSL+DMY       +A  VFD+M +R++++WN++ISGY   G+  
Sbjct: 270  SYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIP 329

Query: 616  NAKKMLNQMEE-----------------------------------EEIKPDLVSWNSLV 640
             +  +  ++ +                                   +E++  LV   ++V
Sbjct: 330  ESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIV 389

Query: 641  SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
              YS  G  K+A ++   M       NV+TWT+++ G  QN    ++LK F QMQ+E + 
Sbjct: 390  DMYSKCGAIKQATIVFGRMGKK----NVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVA 445

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
             NS T+ SL+  C  LG L  G+ +H   +++G+  DA + + LIDMY+K G + SA ++
Sbjct: 446  ANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKL 505

Query: 761  FRKSAN-KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            F    + K +   N MIMG+ ++G+G+ A+ ++  ++E   +P+  TF +LL AC +SGL
Sbjct: 506  FNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGL 565

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            VEEG   F SM  D+++ P  +HY+C+VDL  +AG L+EA + ++ MPF+P   +  ALL
Sbjct: 566  VEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALL 625

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
              CR H +       + RL  L+  NS  Y ++ N+ A + +WE V  +R  M   G+K 
Sbjct: 626  SGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKK 685

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
            +  +S I++   V+ F A    HP+  +IY  L +L  E++  GY+PDT CV +D++E  
Sbjct: 686  IPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPM 745

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K K+L  H+E+LAI +GL+ T   + I++ KN RVC DCH   KY+S +  REI +RD  
Sbjct: 746  KVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDAN 805

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF  G+CSCND W
Sbjct: 806  RFHHFVNGKCSCNDFW 821



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 165/668 (24%), Positives = 279/668 (41%), Gaps = 118/668 (17%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDD--MVKSLIFHYLEFGDFTSAAKAF----FLYFSRSYAD 260
           L  VKS HAQ+IK    W S +  +   LI  Y + G    A   F        +   A 
Sbjct: 60  LIHVKSIHAQIIKN---WVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAM 116

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
            + FL + +    EV  L  + G      +   S      LK CT L+   +G+E+  + 
Sbjct: 117 IAGFLRNQQHM--EVPRLFRMMGSC---DIEINSYTCMFALKACTDLLDDEVGMEIIRAA 171

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++RGF   +++  +++NF  K   +  A K+F  + + +D + WN II   ++   +  +
Sbjct: 172 VRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPE-KDVVCWNSIIGGYVQKGLFWES 230

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           I++F EM     +    T+  +L+AC + G    G   H YVL   + +++ V   L+ M
Sbjct: 231 IQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDM 290

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           YS       A  VFDSM   +L SWN+MIS Y   G +  +++LF ++  S         
Sbjct: 291 YSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQS--------- 341

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                  F  G+   +++L+RG                    ++   L+ GR  H  I+R
Sbjct: 342 ----GSGFDSGT---LVSLIRG-------------------CSQTSDLENGRILHSCIIR 375

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
             L+  L + T+++DMY K   ++ A  VF  M  +N++ W +++ G    G   +A K+
Sbjct: 376 KELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKL 435

Query: 621 LNQMEEEEIKPDLVSWNSLV---------------------SGYSIWGQSKEALVIIHH- 658
             QM+EE++  + V+  SLV                      GY+       AL+ ++  
Sbjct: 436 FCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAK 495

Query: 659 ----------MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                       N     +V+   S+I G   + + R +L  + +M +E +KPN TT  S
Sbjct: 496 CGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVS 555

Query: 709 LLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           LL  C   GL++ GK + H +   +           L+D++S++G L+ A E+ +     
Sbjct: 556 LLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVK----- 610

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
                                        +  FQP      ALL+ C+       G +  
Sbjct: 611 -----------------------------QMPFQPSTDVLEALLSGCRTHKNTNMGIQIA 641

Query: 828 DSM-STDY 834
           D + S DY
Sbjct: 642 DRLISLDY 649



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 4/159 (2%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           K IH   +KN    ++++A  LI +YS  G L  AR VF + +    A  N MI GF   
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD-SMSTDYNIIPTIE 841
               E   LF  +     + ++ T    L AC +    E G +    ++   +++   + 
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
             S MV+ L K GYL +A      MP K D   W +++G
Sbjct: 184 --SSMVNFLVKRGYLADAQKVFDGMPEK-DVVCWNSIIG 219


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 257/811 (31%), Positives = 419/811 (51%), Gaps = 86/811 (10%)

Query: 316  VHASLIKRGF--DFDVHLKCALMNFYGKCRDVESANKLFSEVSD-LEDDLLWNEIIMVKL 372
            +HA+ ++RG        +  AL+  Y +C  + +A ++F  +SD   D + +N +I    
Sbjct: 79   IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 138

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC----AKVGAFHEGKQIHGYVLKSALE 428
               +W++A+   R M        S T+V +L+A     A   A   G++ H + LK+ L 
Sbjct: 139  LFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL- 197

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
                                        +  H   ++N+++S Y  LG V  A  LF   
Sbjct: 198  ----------------------------LHGHQRFAFNALLSMYARLGLVADAQRLFAGA 229

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
               R   D++TWN ++S     G +   +  L  M +LG RP+G + +  L A + L LL
Sbjct: 230  TPGR--GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELL 287

Query: 549  KYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN--RNIVAWNSLI 605
              GRE H Y++++  L  + +V ++L+DMY  ++ +  A++VFD + +  + +  WN++I
Sbjct: 288  DVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMI 347

Query: 606  SGYCFKGLFVNAKKMLNQMEEEE--------------------------------IKPDL 633
             GY   G+   A ++  +ME E                                 +K  +
Sbjct: 348  CGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGM 407

Query: 634  VS----WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                   N+L+  Y+  G++  A  I   +      P+VV+W +LI+G +   +  ++ +
Sbjct: 408  AGNRFVQNALMDMYARLGKTDVARRIFAMVD----LPDVVSWNTLITGCVVQGHVADAFQ 463

Query: 690  FFIQMQQED---IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
               +MQQ +   + PN+ T+ +LL  C  L     GKEIH   +++    D  V + L+D
Sbjct: 464  LAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVD 523

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAI 805
            MY+K G L  +R VF +   +   +WN +IM + ++G G EA +LF  +  +G  +P+ +
Sbjct: 524  MYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEV 583

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF A LAAC +SG+V+ G + F +M  D+ + PT +  +C+VD+LG+AG LDEA+  + +
Sbjct: 584  TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTS 643

Query: 866  MPF-KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            M   +   + W  +LG+CR+H ++   EIA  RL +LEP  +++Y L+ N+ + + +W  
Sbjct: 644  MEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTR 703

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
               +R  M   GV      SWI++D  +H F A  + HPA+ E++  +  L  EM   GY
Sbjct: 704  AAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGY 763

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PDT CV  D+D+ +K  VL  H+EKLAI +GL++    A IRV KN RVC+DCH AAK+
Sbjct: 764  TPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKF 823

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S + GREI LRD  RFHHFR G+CSC D W
Sbjct: 824  LSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 178/395 (45%), Gaps = 18/395 (4%)

Query: 181 TLAKQAQLSCISSGFCF---LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHY 237
           TL     L     G  F   L   ++   L   +  HA +IK  ++  +  +  +L+  Y
Sbjct: 258 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 317

Query: 238 LEFGDFTSAAKAFFLY--FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK-GVIFRS 294
                   A + F +     +    W++ +  Y   G + +E L ++  +  + G +   
Sbjct: 318 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD-EEALRLFARMEAEAGFVPCE 376

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
             +  +L  C +  AF     VH  ++KRG   +  ++ ALM+ Y +    + A ++F+ 
Sbjct: 377 TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAM 436

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI---SRTIVKMLQACAKVGA 411
           V DL D + WN +I   +      +A +L REMQ      +   + T++ +L  CA + A
Sbjct: 437 V-DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 495

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              GK+IHGY ++ AL+++++V + L+ MY++   L L+  VFD +   N  +WN +I +
Sbjct: 496 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 555

Query: 472 YTGLGYVDVAWSLFNKMNSS-RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFR 529
           Y   G    A  LF++M +S   +P+ +T+   L+     G     L L   M+   G  
Sbjct: 556 YGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 615

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           P       +L  V ++ L + GR    Y +   ++
Sbjct: 616 PTPD----ILACVVDI-LGRAGRLDEAYAMVTSME 645


>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/840 (30%), Positives = 432/840 (51%), Gaps = 51/840 (6%)

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G + E + +   L  +G   +      +L+ C      ++G E+H S I    + +  ++
Sbjct: 62   GSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELH-SRIGLVENVNPFVE 120

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
              L++ Y KC  +  A K+F+E+S + +   W+ +I    RN+ W   + LF  M     
Sbjct: 121  TKLVSMYAKCGLLGMARKVFNEMS-VRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGV 179

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                  + K+LQAC K      G+ IH  V++  +  +  + N ++++Y++  +++ A +
Sbjct: 180  LPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKK 239

Query: 453  VFDSMKDHNLSSWNSMISS-----------------------------------YTGLGY 477
            +FD M + +  +WN+MIS                                    Y  LG+
Sbjct: 240  IFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGH 299

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
             D+A  L  KM    I PD+ TW  ++SG    G   + L LL+ M   G   N  +++ 
Sbjct: 300  CDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIAS 359

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
               A   L+ L  G E H   ++  L  ++ VG SL+DMY K   L+ AQ +FD M  R+
Sbjct: 360  AASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERD 419

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
            + +WNS+I GY   G    A ++  +M+E +  P++++WN +++GY   G   +AL +  
Sbjct: 420  VYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFK 479

Query: 658  HMKNSG-IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
             ++  G    N  +W SLISG +Q+    ++L+ F  MQ   I PNS T+ S+L  C  L
Sbjct: 480  SIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANL 539

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
               +  KEIHC  ++   + +  V+  LID Y+KSGNL  ++ +F + + K   SWN M+
Sbjct: 540  VASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSML 599

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
              + ++G  + A+ LF+++ + G QP+  TF ++L A  ++G+V+EG   F  ++ DY +
Sbjct: 600  SSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLV 659

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
               +EHYS MV LLG++G L EA DFI++MP +P++++WGALL +CRIH +   A +A +
Sbjct: 660  RQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHRNFGVAVLAGK 719

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            R+ + EP N+   +L+    ++  ++E          E  V   +  SWI+ + +VH F 
Sbjct: 720  RMLEFEPGNNITRHLLSQAYSLCGKFE-------PEGEKAVNKPIGQSWIERNNVVHTFV 772

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
                 +P   +++  L  +   +K   +V D     ++ ++E    V   H+EKLA  + 
Sbjct: 773  VGDQSNPYLDKLHSWLKRVAVNVKT--HVSDNELYIEEEEKENTSSV---HSEKLAFAFA 827

Query: 1017 LMKTKSRAPI-RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+   ++  I R++K  R+C DCH  AKY+S+  G EI+L D    HHF+ G CSC D W
Sbjct: 828  LIDPHNKPQILRIVKKLRMCRDCHDTAKYISMAYGCEIYLSDSNCLHHFKGGHCSCRDYW 887



 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 235/497 (47%), Gaps = 40/497 (8%)

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS- 432
           N     A+ +   +     +    T + +LQ+C        GK++H  +    L  N++ 
Sbjct: 61  NGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRI---GLVENVNP 117

Query: 433 -VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V   L+SMY++   L +A +VF+ M   NL +W++MI                      
Sbjct: 118 FVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMI---------------------- 155

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                         G   + S+  V+ L   M   G  P+   +  VLQA  + R L+ G
Sbjct: 156 -------------GGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETG 202

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           R  H  ++R G+ +  ++  S+M +Y K   +  A+++FD M  R+ VAWN++ISG+C  
Sbjct: 203 RLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQN 262

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
           G    A+K  + M+++ ++P LV+WN L+S Y+  G    A+ ++  M+  GI P+V TW
Sbjct: 263 GEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTW 322

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
           TS+ISG  Q      +L    +M    ++ N+ T++S    C  L  L  G EIH + +K
Sbjct: 323 TSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVK 382

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
              + +  V   LIDMY K G+LK+A+ +F   + + + SWN +I G+   G   +A  L
Sbjct: 383 MNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHEL 442

Query: 792 FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
           F ++ E+   P+ IT+  ++     SG  ++    F S+  D         ++ ++    
Sbjct: 443 FMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFV 502

Query: 852 KAGYLDEAWDFIRTMPF 868
           ++G  D+A    R M F
Sbjct: 503 QSGQKDKALQIFRNMQF 519



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 104/474 (21%), Positives = 182/474 (38%), Gaps = 78/474 (16%)

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL--DYDL 567
           +GS    +T+L  +   G R    +   +LQ+  +   +  G+E H  I   GL  + + 
Sbjct: 61  NGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRI---GLVENVNP 117

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           +V T L+ MY K   L  A++VF+ M  RN+  W+++I G      +     +   M  +
Sbjct: 118 FVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRD 177

Query: 628 EIKPDL------------------------------VSW-----NSLVSGYSIWGQSKEA 652
            + PD                               + W     NS+++ Y+  G+   A
Sbjct: 178 GVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCA 237

Query: 653 LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
             I   M       + V W ++ISG  QN    ++ K+F  MQ++ ++P+  T + L+  
Sbjct: 238 KKIFDCMDER----DSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISC 293

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
              LG        HC                 ID+  K      A +V+         +W
Sbjct: 294 YNQLG--------HC--------------DLAIDLMRKMEWFGIAPDVY---------TW 322

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
             MI GF   G    A+ L  E+   G + + IT  +  +AC     +  G +   S++ 
Sbjct: 323 TSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLE-IHSIAV 381

Query: 833 DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA- 891
             N++  +   + ++D+  K G L  A   I  M  + D   W +++G     G    A 
Sbjct: 382 KMNLVDNVLVGNSLIDMYCKCGDLKAA-QHIFDMMSERDVYSWNSIIGGYFQAGFCGKAH 440

Query: 892 EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
           E+  +      P N   +N+M+     S   +    L  S+++ G       SW
Sbjct: 441 ELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASW 494



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 12/220 (5%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           I+GSL      E++     + ++  +    T  +LLQ+C     +  GKE+H    + G 
Sbjct: 60  INGSLS-----EAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHS---RIGL 111

Query: 735 IKDA--YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
           +++   +V T L+ MY+K G L  AR+VF + + + L +W+ MI G +   +  E + LF
Sbjct: 112 VENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLF 171

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
           + ++  G  PD      +L AC     +E G +   SM     +  +    + ++ +  K
Sbjct: 172 YAMMRDGVLPDEFLLPKVLQACGKCRDLETG-RLIHSMVIRRGMRWSKHLRNSIMAVYAK 230

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
            G +D A      M  + D+  W A++     +G +  A+
Sbjct: 231 CGEMDCAKKIFDCMDER-DSVAWNAMISGFCQNGEIGQAQ 269


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/722 (32%), Positives = 381/722 (52%), Gaps = 68/722 (9%)

Query: 418  IHGYVLKSALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H  +LK+ L++  + + N L++ Y+++ +L  A RVFD M D NL + N+++S+     
Sbjct: 34   VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSV 535
             V     LF  M     + D +++N L++G  + GS    + L R + +    RP   ++
Sbjct: 94   LVPDMERLFASMP----ERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITL 149

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            S ++   + L     G   H  +LR G     +VG+ L+DMY K   +++A+ VF  M+ 
Sbjct: 150  SAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEA 209

Query: 596  RNIVAWNSLISGYC-------FKGLF------------------------VNAKKMLNQM 624
            + +V +N+LI+G          KGLF                        + A  +  +M
Sbjct: 210  KTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM 269

Query: 625  EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-------------GIYP----- 666
              E +  D  ++ S+++       S+E   I  ++  +              +Y      
Sbjct: 270  RAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSI 329

Query: 667  -------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                         N+++WT++I G  QN    E+++ F +MQ + IKP+  T+ S++ +C
Sbjct: 330  RLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC 389

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              L  L+ G + HCL L +G ++   V+  L+ +Y K G+++ A  +F + +     SW 
Sbjct: 390  ANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 449

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             ++ G+A +G  KE I LF ++L  G +PD +TF  +L+AC  +GLVE+G  YFDSM  D
Sbjct: 450  ALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKD 509

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            ++I+P  +HY+CM+DL  ++G   EA +FI+ MP  PDA  W  LL SCR+ G++E  + 
Sbjct: 510  HDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKW 569

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A+  L + +P N A+Y L+ ++ A   +W +V  LR  M +  VK     SWI+    VH
Sbjct: 570  AAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVH 629

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
            +FSA+   HP +  IY +L  L S+M + GY PD   V  D+ + +K  ++  H+EKLAI
Sbjct: 630  IFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAI 689

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +GL+      PIR++KN RVC DCH A K++S + GR+I +RD  RFH F +G CSC D
Sbjct: 690  AFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGD 749

Query: 1074 CW 1075
             W
Sbjct: 750  FW 751



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 230/515 (44%), Gaps = 43/515 (8%)

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           D ++  + AL++     R V    +LF+ + +  D + +N +I           +++L+R
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPE-RDAVSYNALITGFSSTGSPARSVQLYR 134

Query: 386 EM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            + +  S +    T+  M+   + +     G  +H  VL+    +   V + L+ MY++ 
Sbjct: 135 ALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKM 194

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +  A RVF  M+   +  +N++I+       ++ A  LF  M    +  D ITW  ++
Sbjct: 195 GLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLM----VDRDSITWTTMV 250

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           +G   +G     L + R M++ G   +  +   +L A   L   + G++ H YI R   +
Sbjct: 251 TGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYE 310

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            +++VG++L+DMY K   ++ A+ VF  M  RNI++W ++I GY        A +  ++M
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370

Query: 625 EEEEIKPDLVSWNS---------------------LVSGYSIWGQSKEALVII------- 656
           + + IKPD  +  S                     LVSG   +     ALV +       
Sbjct: 371 QMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSI 430

Query: 657 ---HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
              H + +   + + V+WT+L++G  Q    +E++  F +M    +KP+  T   +L  C
Sbjct: 431 EDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSAC 490

Query: 714 GGLGLLQNGKEIHCLCLKNG---FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              GL++ G +      K+     I D Y  T +ID+YS+SG  K A E  ++  +   A
Sbjct: 491 SRAGLVEKGCDYFDSMQKDHDIVPIDDHY--TCMIDLYSRSGRFKEAEEFIKQMPHSPDA 548

Query: 771 -SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
             W  ++    + GN +        LLET  Q  A
Sbjct: 549 FGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPA 583



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 210/501 (41%), Gaps = 73/501 (14%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGV 314
           R    +++ +  + S G   + + +++  L  +  +  +RI L+ ++ + + L    LG 
Sbjct: 108 RDAVSYNALITGFSSTGSPARSV-QLYRALLREESVRPTRITLSAMIMVASALSDRALGH 166

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGK-------------------------------CR 343
            VH  +++ GF     +   L++ Y K                               C+
Sbjct: 167 SVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCK 226

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            +E A  LF  + D  D + W  ++    +N     A+ +FR M+         T   +L
Sbjct: 227 MIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            AC  + A  EGKQIH Y+ ++  E N+ V + L+ MYS+   + LA  VF  M   N+ 
Sbjct: 286 TACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           SW +MI  Y      + A   F++M    I+PD           FT GS           
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPD----------DFTLGS----------- 384

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                         V+ +   L  L+ G + H   L +GL   + V  +L+ +Y K   +
Sbjct: 385 --------------VISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSI 430

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
           ++A  +FD M   + V+W +L++GY   G       +  +M    +KPD V++  ++S  
Sbjct: 431 EDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSAC 490

Query: 644 SIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           S  G  ++       M K+  I P    +T +I    ++  ++E+ +F  QM      P+
Sbjct: 491 SRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH---SPD 547

Query: 703 STTMSSLLQTCGGLGLLQNGK 723
           +   ++LL +C   G ++ GK
Sbjct: 548 AFGWATLLSSCRLRGNMEIGK 568



 Score =  120 bits (302), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 2/278 (0%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           M  +LI   L       A   F L   R    W++ +      G ++ E L+V+  +  +
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQL-EALDVFRRMRAE 272

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           GV         IL  C  L A   G ++HA + +  ++ +V +  AL++ Y KCR +  A
Sbjct: 273 GVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F  ++   + + W  +I+   +N   E A++ F EMQ    K    T+  ++ +CA 
Sbjct: 333 EAVFRRMT-CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + +  EG Q H   L S L   ++V N L+++Y +   +E A R+FD M  H+  SW ++
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ Y   G       LF KM  + ++PD +T+  +LS 
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSA 489


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/753 (32%), Positives = 386/753 (51%), Gaps = 54/753 (7%)

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQFS-S 391
            +L+  Y     + +A   F  V     D +L N +I    R      A+ +FR +  S S
Sbjct: 93   SLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGS 152

Query: 392  AKAISRTIVKMLQACAKVG--AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
             +    +   +L A   +   +     Q+H  VLKS     LSVCN L+++Y +    E 
Sbjct: 153  LRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEA 212

Query: 450  ---ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
               A +V D M + +  +W +M+  Y   G V  A S+F +++    + D++ WN ++SG
Sbjct: 213  TRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDG---KFDVV-WNAMISG 268

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY- 565
            +   G       L R M       +  + + VL A   + L  +G+  HG I+R   ++ 
Sbjct: 269  YVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFV 328

Query: 566  ---DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
                L V  +L+  Y K   +  A+ +FDNM  +                          
Sbjct: 329  PEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK-------------------------- 362

Query: 623  QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                     D+VSWN+++SGY       +A+ +   M     Y N ++W  ++SG +   
Sbjct: 363  ---------DVVSWNTILSGYVESSCLDKAVEVFEEMP----YKNELSWMVMVSGYVHGG 409

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               ++LK F +M+ E++KP   T +  +  CG LG L++GK++H   ++ GF        
Sbjct: 410  FAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGN 469

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             LI MY++ G +K A  +F    N    SWN MI     +G+G+EA+ LF  ++  G  P
Sbjct: 470  ALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYP 529

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D I+F  +L AC +SGLV+EG++YF+SM  D+ IIP  +HY+ ++DLLG+AG + EA D 
Sbjct: 530  DRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL 589

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I+TMPF+P  +IW A+L  CR  G +E    A+ +LFK+ P +   Y L+ N  + +  W
Sbjct: 590  IKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCW 649

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
             D  R+R  M + GVK     SWI+    VHVF      HP   E+Y  L  + ++M+KL
Sbjct: 650  VDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKL 709

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVPDT+ V  D++  +K  +L +H+E+LA+ +GL+     A + V+KN R+C DCH A 
Sbjct: 710  GYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAI 769

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +MS   GREI +RD  RFHHF++GECSC + W
Sbjct: 770  MFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 39/339 (11%)

Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
            +C S   ++ A+ + + ++ N DD+   +++  Y+  GD  +A   F     +    W+
Sbjct: 205 MKCESPEATRDARKV-LDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWN 263

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIK 322
           + +  Y   G  V E  E++  +  + V       T +L  C  +  F  G  VH  +I+
Sbjct: 264 AMISGYVHSGMAV-EAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIR 322

Query: 323 RGFDF----DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM--------- 369
              +F     + +  AL+ FY KC ++  A ++F  ++ L+D + WN I+          
Sbjct: 323 LQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMT-LKDVVSWNTILSGYVESSCLD 381

Query: 370 --------VKLRNE-KW-------------ENAIKLFREMQFSSAKAISRTIVKMLQACA 407
                   +  +NE  W             E+A+KLF +M+  + K    T    + AC 
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACG 441

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
           ++GA   GKQ+HG++++   E + S  N LI+MY+R   ++ A  +F  M + +  SWN+
Sbjct: 442 ELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNA 501

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           MIS+    G+   A  LF++M +  I PD I++  +L+ 
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/621 (36%), Positives = 356/621 (57%), Gaps = 10/621 (1%)

Query: 459  DHNLSSWNSM-ISSYTGLGYVDVAWS---LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            DH+L S  S+ I            WS   +F+++     + +++ +N ++  +  +  Y 
Sbjct: 1053 DHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIP----KKNVVFFNVMIRSYVNNHLYS 1108

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
            + L + + M   G  P+  +   VL+A +    L  G + H  ++R GLD +++VG  L+
Sbjct: 1109 DALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLI 1168

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
             MY K  CL  A  V D M  R++V+WNSL++G    G F +A ++  +ME   +KPD  
Sbjct: 1169 SMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAG 1228

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
            +  SL+   +       + V    MK +    ++V+W  +I+  + N    E++  F+QM
Sbjct: 1229 TMASLLPAVTNTCLDNVSFVKEMFMKLAN--KSLVSWNVMIAVYMNNSMPAEAVDIFLQM 1286

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
            +   + P++ +++S+L  CG L  L  G+ IH   ++     +  +   LIDMY+K G L
Sbjct: 1287 EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCL 1346

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            + AREVF +   + + SW  MI  + + G G++A+ LF  + + G  PD+I F ++L+AC
Sbjct: 1347 EYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSAC 1406

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
             ++GL++EG  YF  M+ +  I+P IEH+ CMVDLLG+AG +DEA+ FI+ MP +P+  +
Sbjct: 1407 SHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERV 1466

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            WGALL +CR++ ++    +A+ +LF+L P  S  Y L+ N+ A + RWEDV  +R  M  
Sbjct: 1467 WGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKT 1526

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
             G+K +   S  ++D  VH F A    HP + +IY EL  LV +MK+ GYVP+T     D
Sbjct: 1527 KGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHD 1586

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
            ++EE+K   L  H+EKLAI + ++ T   +PIR+ KN RVC DCH AAK +S + GREI 
Sbjct: 1587 VEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREIT 1646

Query: 1055 LRDGARFHHFREGECSCNDCW 1075
            +RD  RFHHF  G CSC D W
Sbjct: 1647 IRDTNRFHHFYNGVCSCGDYW 1667



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 217/492 (44%), Gaps = 56/492 (11%)

Query: 325  FDFDVH----LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
             D D+H    L   LM  Y  C +  S   +F E+   ++ + +N +I   + N  + +A
Sbjct: 1052 IDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK-KNVVFFNVMIRSYVNNHLYSDA 1110

Query: 381  IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
            + +F+ M          T   +L+A +       G QIH  V++  L+ N+ V N LISM
Sbjct: 1111 LLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISM 1170

Query: 441  YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD---- 496
            Y +   L  A RV D M   ++ SWNS+++     G  D A  +  +M    ++PD    
Sbjct: 1171 YGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTM 1230

Query: 497  -----------------------------IITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
                                         +++WN +++ +  +      + +   M+   
Sbjct: 1231 ASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA 1290

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P+  S++ VL A  +L  L  GR  H Y++R  L  +L +  +L+DMY K  CL+ A+
Sbjct: 1291 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 1350

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            EVFD MK R++V+W S+IS Y   G   +A  + ++M++  + PD +++ S++S  S  G
Sbjct: 1351 EVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAG 1410

Query: 648  QSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
               E       M +   I P +  +  ++    +     E+  F  QM  E   PN    
Sbjct: 1411 LLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPME---PNERVW 1467

Query: 707  SSLLQTCGG-----LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAR 758
             +LL  C       +GLL   +       ++G+    YV   L ++Y+K+G   ++ + R
Sbjct: 1468 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGY----YVL--LSNIYAKAGRWEDVTTVR 1521

Query: 759  EVFRKSANKTLA 770
             + +    K + 
Sbjct: 1522 SIMKTKGIKKMP 1533



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 139/315 (44%), Gaps = 46/315 (14%)

Query: 277  ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALM 336
            + L V+  + G G+         +LK  +     W+G+++HA++++ G D +V +   L+
Sbjct: 1109 DALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLI 1168

Query: 337  NFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS 396
            + YGKC  +  A ++  Z+    D + WN ++    RN ++++A+++ +EM+    K  +
Sbjct: 1169 SMYGKCGCLVEACRVLDZMP-CRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDA 1227

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
             T+  +L A            +    +K A +S +S  N +I++Y  N+    A  +F  
Sbjct: 1228 GTMASLLPAVTNT-CLDNVSFVKEMFMKLANKSLVS-WNVMIAVYMNNSMPAEAVDIFLQ 1285

Query: 457  MKDH---------------------------------------NLSSWNSMISSYTGLGY 477
            M+DH                                       NL   N++I  Y   G 
Sbjct: 1286 MEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGC 1345

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            ++ A  +F++M       D+++W  ++S +  +G  ++ ++L   MQ LG  P+  +   
Sbjct: 1346 LEYAREVFDQMKFR----DVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVS 1401

Query: 538  VLQAVTELRLLKYGR 552
            VL A +   LL  GR
Sbjct: 1402 VLSACSHAGLLDEGR 1416



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 127/296 (42%), Gaps = 16/296 (5%)

Query: 242  DFTSAAKAFFLYFS-RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
            D  S  K  F+  + +S   W+  +  Y +      E ++++ ++    V   +  +  +
Sbjct: 1243 DNVSFVKEMFMKLANKSLVSWNVMIAVYMN-NSMPAEAVDIFLQMEDHAVDPDAISIASV 1301

Query: 301  LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
            L  C  L A  LG  +H  ++++    ++ L+ AL++ Y KC  +E A ++F ++    D
Sbjct: 1302 LPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMK-FRD 1360

Query: 361  DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
             + W  +I     N K  +A+ LF  MQ       S   V +L AC+  G   EG+    
Sbjct: 1361 VVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR---- 1416

Query: 421  YVLKSALESNLSVCN-----CLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTG 474
            Y  K   E    V       C++ +  R  +++ A      M  + N   W +++S+   
Sbjct: 1417 YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACR- 1475

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFR 529
              Y ++   L       ++ P+   +  LLS  +   G +++V T+   M++ G +
Sbjct: 1476 -VYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 1530



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 17/230 (7%)

Query: 723  KEIHC-LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            K++H  +C+ +    +  +   L+  Y+  G   S R +F +   K +  +N MI  +  
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS---MSTDYNIIP 838
                 +A+L+F  +   G  PD  T+  +L A   S  +  G +   +   +  D N+  
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 1163

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA-EIASR- 896
                 + ++ + GK G L EA   +  MP + D   W +L+  C  +G  + A E+    
Sbjct: 1164 G----NGLISMYGKCGCLVEACRVLDZMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEM 1218

Query: 897  RLFKLEPCNSANYNLMMNLL-AMSNR-WEDVERLRHSMDEVGVKSVLVWS 944
             L  L+P    +   M +LL A++N   ++V  ++    ++  KS++ W+
Sbjct: 1219 ELLGLKP----DAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWN 1264


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 257/811 (31%), Positives = 419/811 (51%), Gaps = 86/811 (10%)

Query: 316  VHASLIKRGF--DFDVHLKCALMNFYGKCRDVESANKLFSEVSD-LEDDLLWNEIIMVKL 372
            +HA+ ++RG        +  AL+  Y +C  + +A ++F  +SD   D + +N +I    
Sbjct: 81   IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 140

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC----AKVGAFHEGKQIHGYVLKSALE 428
               +W++A+   R M        S T+V +L+A     A   A   G++ H + LK+ L 
Sbjct: 141  LFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL- 199

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
                                        +  H   ++N+++S Y  LG V  A  LF   
Sbjct: 200  ----------------------------LHGHQRFAFNALLSMYARLGLVADAQRLFAGA 231

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
               R   D++TWN ++S     G +   +  L  M +LG RP+G + +  L A + L LL
Sbjct: 232  TPGR--GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELL 289

Query: 549  KYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN--RNIVAWNSLI 605
              GRE H Y++++  L  + +V ++L+DMY  ++ +  A++VFD + +  + +  WN++I
Sbjct: 290  DVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMI 349

Query: 606  SGYCFKGLFVNAKKMLNQMEEEE--------------------------------IKPDL 633
             GY   G+   A ++  +ME E                                 +K  +
Sbjct: 350  CGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGM 409

Query: 634  VS----WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                   N+L+  Y+  G++  A  I   +      P+VV+W +LI+G +   +  ++ +
Sbjct: 410  AGNRFVQNALMDMYARLGKTDVARRIFAMVD----LPDVVSWNTLITGCVVQGHVADAFQ 465

Query: 690  FFIQMQQED---IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
               +MQQ +   + PN+ T+ +LL  C  L     GKEIH   +++    D  V + L+D
Sbjct: 466  LAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVD 525

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAI 805
            MY+K G L  +R VF +   +   +WN +IM + ++G G EA +LF  +  +G  +P+ +
Sbjct: 526  MYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEV 585

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF A LAAC +SG+V+ G + F +M  D+ + PT +  +C+VD+LG+AG LDEA+  + +
Sbjct: 586  TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTS 645

Query: 866  MPF-KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            M   +   + W  +LG+CR+H ++   EIA  RL +LEP  +++Y L+ N+ + + +W  
Sbjct: 646  METGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTR 705

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
               +R  M   GV      SWI++D  +H F A  + HPA+ E++  +  L  EM   GY
Sbjct: 706  AAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGY 765

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PDT CV  D+D+ +K  VL  H+EKLAI +GL++    A IRV KN RVC+DCH AAK+
Sbjct: 766  TPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKF 825

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S + GREI LRD  RFHHFR G+CSC D W
Sbjct: 826  LSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 178/395 (45%), Gaps = 18/395 (4%)

Query: 181 TLAKQAQLSCISSGFCF---LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHY 237
           TL     L     G  F   L   ++   L   +  HA +IK  ++  +  +  +L+  Y
Sbjct: 260 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 319

Query: 238 LEFGDFTSAAKAFFLY--FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK-GVIFRS 294
                   A + F +     +    W++ +  Y   G + +E L ++  +  + G +   
Sbjct: 320 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD-EEALRLFARMEAEAGFVPCE 378

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
             +  +L  C +  AF     VH  ++KRG   +  ++ ALM+ Y +    + A ++F+ 
Sbjct: 379 TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAM 438

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI---SRTIVKMLQACAKVGA 411
           V DL D + WN +I   +      +A +L REMQ      +   + T++ +L  CA + A
Sbjct: 439 V-DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 497

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              GK+IHGY ++ AL+++++V + L+ MY++   L L+  VFD +   N  +WN +I +
Sbjct: 498 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 557

Query: 472 YTGLGYVDVAWSLFNKMNSS-RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFR 529
           Y   G    A  LF++M +S   +P+ +T+   L+     G     L L   M+   G  
Sbjct: 558 YGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 617

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           P       +L  V ++ L + GR    Y +   ++
Sbjct: 618 PTPD----ILACVVDI-LGRAGRLDEAYAMVTSME 647


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 257/811 (31%), Positives = 419/811 (51%), Gaps = 86/811 (10%)

Query: 316  VHASLIKRGF--DFDVHLKCALMNFYGKCRDVESANKLFSEVSD-LEDDLLWNEIIMVKL 372
            +HA+ ++RG        +  AL+  Y +C  + +A ++F  +SD   D + +N +I    
Sbjct: 79   IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 138

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC----AKVGAFHEGKQIHGYVLKSALE 428
               +W++A+   R M        S T+V +L+A     A   A   G++ H + LK+ L 
Sbjct: 139  LFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL- 197

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
                                        +  H   ++N+++S Y  LG V  A  LF   
Sbjct: 198  ----------------------------LHGHQRFAFNALLSMYARLGLVADAQRLFAGA 229

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
               R   D++TWN ++S     G +   +  L  M +LG RP+G + +  L A + L LL
Sbjct: 230  TPGR--GDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELL 287

Query: 549  KYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN--RNIVAWNSLI 605
              GRE H Y++++  L  + +V ++L+DMY  ++ +  A++VFD + +  + +  WN++I
Sbjct: 288  DVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMI 347

Query: 606  SGYCFKGLFVNAKKMLNQMEEEE--------------------------------IKPDL 633
             GY   G+   A ++  +ME E                                 +K  +
Sbjct: 348  CGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGM 407

Query: 634  VS----WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                   N+L+  Y+  G++  A  I   +      P+VV+W +LI+G +   +  ++ +
Sbjct: 408  AGNRFVQNALMDMYARLGKTDVARRIFAMVD----LPDVVSWNTLITGCVVQGHVADAFQ 463

Query: 690  FFIQMQQED---IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
               +MQQ +   + PN+ T+ +LL  C  L     GKEIH   +++    D  V + L+D
Sbjct: 464  LAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVD 523

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAI 805
            MY+K G L  +R VF +   +   +WN +IM + ++G G EA +LF  +  +G  +P+ +
Sbjct: 524  MYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEV 583

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF A LAAC +SG+V+ G + F +M  D+ + PT +  +C+VD+LG+AG LDEA+  + +
Sbjct: 584  TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTS 643

Query: 866  MPF-KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            M   +   + W  +LG+CR+H ++   EIA  RL +LEP  +++Y L+ N+ + + +W  
Sbjct: 644  METGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTR 703

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
               +R  M   GV      SWI++D  +H F A  + HPA+ E++  +  L  EM   GY
Sbjct: 704  AAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGY 763

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PDT CV  D+D+ +K  VL  H+EKLAI +GL++    A IRV KN RVC+DCH AAK+
Sbjct: 764  TPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKF 823

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S + GREI LRD  RFHHFR G+CSC D W
Sbjct: 824  LSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 178/395 (45%), Gaps = 18/395 (4%)

Query: 181 TLAKQAQLSCISSGFCF---LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHY 237
           TL     L     G  F   L   ++   L   +  HA +IK  ++  +  +  +L+  Y
Sbjct: 258 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 317

Query: 238 LEFGDFTSAAKAFFLY--FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK-GVIFRS 294
                   A + F +     +    W++ +  Y   G + +E L ++  +  + G +   
Sbjct: 318 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD-EEALRLFARMEAEAGFVPCE 376

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
             +  +L  C +  AF     VH  ++KRG   +  ++ ALM+ Y +    + A ++F+ 
Sbjct: 377 TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAM 436

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI---SRTIVKMLQACAKVGA 411
           V DL D + WN +I   +      +A +L REMQ      +   + T++ +L  CA + A
Sbjct: 437 V-DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 495

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              GK+IHGY ++ AL+++++V + L+ MY++   L L+  VFD +   N  +WN +I +
Sbjct: 496 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 555

Query: 472 YTGLGYVDVAWSLFNKMNSS-RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFR 529
           Y   G    A  LF++M +S   +P+ +T+   L+     G     L L   M+   G  
Sbjct: 556 YGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 615

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           P       +L  V ++ L + GR    Y +   ++
Sbjct: 616 PTPD----ILACVVDI-LGRAGRLDEAYAMVTSME 645


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 684

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/733 (32%), Positives = 396/733 (54%), Gaps = 75/733 (10%)

Query: 344  DVESANKLFSEVSDLEDDL-LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
            D++ A  LF ++   E DL  W  +I    ++   + AI ++  +   + +     ++ +
Sbjct: 26   DLKRALYLFDKIP--EPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSV 83

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
             +ACA  G     K+IH   ++     +L + N LI M+ +   +  A  VFD M   ++
Sbjct: 84   AKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDV 143

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
             SW SM   Y                            NC        G  +  + L R 
Sbjct: 144  VSWTSMTYCYV---------------------------NC--------GMCRQGILLFRE 168

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M   G R N  +VS +L A  +   +K GRE HG+ILRN ++ ++YV ++L++MY  +  
Sbjct: 169  MGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLG 226

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
            L+ A+ VFD+M +R                                   D+VSWN +++ 
Sbjct: 227  LKQARLVFDSMYHR-----------------------------------DIVSWNVMLTA 251

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
            Y +  + +  L + H M+  GI  N  +W + ISG +QN  +  +L    +MQ   IKPN
Sbjct: 252  YFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPN 311

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              T+ S L  C  L  L+ GKEIH    ++ FI+D  + T L+ +Y+K G+L+ +R VF 
Sbjct: 312  RITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFN 371

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
                K + +WN MIM  +++G G E+++LF+++L++G +P+++TF  +L+ C +S L +E
Sbjct: 372  TMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADE 431

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G   F+SMS++++I P  +HYSCMVD+L +AG L+EA+DFIR MP +P A  WGALLG+C
Sbjct: 432  GLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGAC 491

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            R++ ++E   +A+ +LF++EP N+ NY L+ N+L  + +W +   +R  M + G+     
Sbjct: 492  RVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPG 551

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             SW+Q+   V+ F      +     IY  L  +  +M+  GY P+T  V Q++D+E++ +
Sbjct: 552  RSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREE 611

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L SH+E+LA+ +G++ +  +  +RV KN R+C DCH A K ++ + G +I +RD  RFH
Sbjct: 612  TLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFH 671

Query: 1063 HFREGECSCNDCW 1075
            HFR+G C+CND W
Sbjct: 672  HFRDGYCTCNDFW 684



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 232/466 (49%), Gaps = 5/466 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI   L  GD   A   F          W+  +  +   G   ++ ++++  L  + V  
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFP-KKAIDIYSTLLSRNVRP 75

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
              +L  + K C       +  ++H   I+ GF+ D+ L  AL++ +GKC+ V  A  +F
Sbjct: 76  DKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVF 135

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            ++  ++D + W  +    +        I LFREM  +  +A S T+  +L ACA     
Sbjct: 136 DDMV-VKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--I 192

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G+++HG++L++ +E N+ V + L++MY+ +  L+ A  VFDSM   ++ SWN M+++Y
Sbjct: 193 KLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAY 252

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                 +    LF++M    I+ +  +WN  +SG   +G ++  L +L  MQ  G +PN 
Sbjct: 253 FLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNR 312

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++   L   T L  L+ G+E HGY+ R+    D+ + T+L+ +Y K   L+ ++ VF+ 
Sbjct: 313 ITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNT 372

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           M  +++VAWN++I      G    +  + N+M +  ++P+ V++  ++SG S    + E 
Sbjct: 373 MPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEG 432

Query: 653 LVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           L++ + M +   I P+   ++ ++    +     E+  F  +M  E
Sbjct: 433 LLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIE 478


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/669 (36%), Positives = 352/669 (52%), Gaps = 77/669 (11%)

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G +  A SLF  + +    P+ + WN ++ G  +  S    L     M S G  PN  + 
Sbjct: 76   GDLSYALSLFKTIRN----PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTF 131

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ-------- 587
              + ++ T++R    G++ H ++L+ GL+++ +V TSL++MY +N  L NA+        
Sbjct: 132  PSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSM 191

Query: 588  -----------------------EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
                                   E+FD +  R++V+WN++ISGY   G    A     +M
Sbjct: 192  RDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM 251

Query: 625  EEEEIKPDLV-----------------------SW-------------NSLVSGYSIWGQ 648
               ++ P++                        SW             N L+  Y   G 
Sbjct: 252  RRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGD 311

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             +EA  +   +++     NVV+W  +I G      Y+E+L  F +M Q +I PN  T  S
Sbjct: 312  LEEASNLFEKIQDK----NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLS 367

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSAN 766
            +L  C  LG L  GK +H    KN       VA  T LIDMY+K G+L  A+ +F     
Sbjct: 368  ILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNT 427

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            K+LA+WN MI GFA++G+   A+ LF  +   GF PD ITF  +L ACK++GL+  G +Y
Sbjct: 428  KSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRY 487

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F SM  DY + P + HY CM+DL G+AG  DEA   ++ M  KPD  IW +LLG+CRIH 
Sbjct: 488  FSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHR 547

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
             +E AE  ++ LF+LEP N + Y L+ N+ A + RWEDV ++R  +++  +K V   S I
Sbjct: 548  RIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSI 607

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            ++D +VH F      HP + EIY  L  +   ++K G+VPDT  V  D+DEE K  VL  
Sbjct: 608  EVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSH 667

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            H+EKLAI +GL+ TK    IR++KN RVC +CH+A K +S +  REI  RD  RFHHF++
Sbjct: 668  HSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKD 727

Query: 1067 GECSCNDCW 1075
            G CSC D W
Sbjct: 728  GSCSCKDYW 736



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 220/505 (43%), Gaps = 50/505 (9%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCR--DVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           ++H+ +IK G          L+ F       D+  A  LF  + +  + ++WN +I    
Sbjct: 46  QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN-PNHVIWNHMIRGLS 104

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            +E    A++ +  M  S  +    T   + ++C K+   HEGKQ+H +VLK  LE N  
Sbjct: 105 SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAF 164

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V   LI+MY++N +L  A  VFD     +  S+ ++I+ Y   G++D A  LF+++    
Sbjct: 165 VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVR- 223

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL-RLLKYG 551
              D+++WN ++SG+   G  +  +     M+     PN S++  VL A  +    L+ G
Sbjct: 224 ---DVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLG 280

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
                +I   GL  ++ +   L+DMYVK   L+ A  +F+ ++++N+V+WN +I GY   
Sbjct: 281 NWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHM 340

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVS------------------------------------ 635
             +  A  +  +M +  I P+ V+                                    
Sbjct: 341 SCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVA 400

Query: 636 -WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
            W SL+  Y+  G    A  I   M    +     TW ++ISG   + +   +L  F +M
Sbjct: 401 LWTSLIDMYAKCGDLAVAKRIFDCMNTKSL----ATWNAMISGFAMHGHTDTALGLFSRM 456

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGN 753
             E   P+  T   +L  C   GLL  G+      +++  +       G +ID++ ++G 
Sbjct: 457 TSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGL 516

Query: 754 LKSAREVFRKSANKTLASWNCMIMG 778
              A  + +    K   +  C ++G
Sbjct: 517 FDEAETLVKNMEMKPDGAIWCSLLG 541



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 205/478 (42%), Gaps = 82/478 (17%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEF------GDFTSAAKAFFLYFSRSY 258
           + L ++K  H+Q+IK G + N+   +  LI    EF      GD + A   F    + ++
Sbjct: 39  KTLQTLKQIHSQIIKTG-LHNTHFALSKLI----EFCAVSPHGDLSYALSLFKTIRNPNH 93

Query: 259 ADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
             W+  +    S       L E +  +   G          I K CTK+     G +VHA
Sbjct: 94  VIWNHMIRGLSSSESPFLAL-EYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHA 152

Query: 319 SLIKRGFDFDVHLKCALMNFYGK---------------CRD----------------VES 347
            ++K G + +  +  +L+N Y +                RD                ++ 
Sbjct: 153 HVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDE 212

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A +LF E+  + D + WN +I    ++ + E A+  F EM+ +       T++ +L ACA
Sbjct: 213 ARELFDEIP-VRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACA 271

Query: 408 KVG-AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           + G +   G  +  ++    L SN+ + N LI MY +   LE A+ +F+ ++D N+ SWN
Sbjct: 272 QSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWN 331

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
            MI  YT +     A  LF +M  S I P+ +T+   LS                     
Sbjct: 332 VMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTF---LS--------------------- 367

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN--GLDYDLYVGTSLMDMYVKNDCLQ 584
                      +L A   L  L  G+  H Y+ +N   +   + + TSL+DMY K   L 
Sbjct: 368 -----------ILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLA 416

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
            A+ +FD M  +++  WN++ISG+   G    A  + ++M  E   PD +++  +++ 
Sbjct: 417 VAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTA 474


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
            [Vitis vinifera]
          Length = 640

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/682 (35%), Positives = 378/682 (55%), Gaps = 44/682 (6%)

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
            I + ++ +LQ   K+       QIH  ++K++L+ N    N +++        +L  R+F
Sbjct: 2    IGKKVMSLLQNATKLNQI---IQIHALIIKTSLDGN----NFVLA--------KLLRRLF 46

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
                           SS   L Y   A S+F+++ S    PD   WN ++  +    + Q
Sbjct: 47   -------------ACSSANDLLY---ARSVFDEIPS----PDTFIWNTMIRAYLNSQNPQ 86

Query: 515  NVLTLLRGMQSLGFRPNGS-SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              ++L   M+     P  S S+S+V+QA   L+    G++ H  +L+ GL  DL+V T+L
Sbjct: 87   ESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETAL 146

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            ++MY K   ++ A+ + D M + ++V +N L++ Y   G    A  + ++M E     DL
Sbjct: 147  IEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPER----DL 202

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
            VSWN+++ G++  G    A      + +     ++++W+S+I+   +     E+L+ F +
Sbjct: 203  VSWNTMIHGHASLGDVGTA----KKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHE 258

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            MQ  ++ P+  TM S+L  CG +G L  GK IH    +N    D  + T L+DMY+K G+
Sbjct: 259  MQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGD 318

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            + ++  VF    N+ + +W+ MIMG A +G G+ A+  F +++    +P+ +TF  +L+A
Sbjct: 319  IDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSA 378

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C + GLV+EGW YF SMS  Y++ P IEHY C+VD+LG+AG L EA + I++MPF PDA 
Sbjct: 379  CSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAI 438

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            +W ALLG+CRI+ ++E AE A+  L +LEP    NY L+ N+ + +  W+ V  +R  M 
Sbjct: 439  VWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMK 498

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
             + ++ V   S I++D  VH F A    HP + +I   L  + + +K  GY P T  V Q
Sbjct: 499  NINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQ 558

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D DE+EK   L  H+EKLAI +GL+ T   + IR++KN RVC DCH A K +S    R I
Sbjct: 559  DFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRI 618

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD  RFHHF  G CSC D W
Sbjct: 619  IVRDRNRFHHFVNGSCSCKDYW 640



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 92/164 (56%), Gaps = 3/164 (1%)

Query: 344 DVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
           DV +A KLF      E DL+ W+ +I    +  +   A++LF EMQ ++      T+V +
Sbjct: 217 DVGTAKKLFDRTC--ERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSV 274

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L AC  VGA   GK IH  + ++ +E +L +   L+ MY++   ++ + RVF+ M + ++
Sbjct: 275 LSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDV 334

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            +W++MI      G+ ++A   F+KM S  I+P+ +T+  +LS 
Sbjct: 335 FAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSA 378


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/644 (35%), Positives = 362/644 (56%), Gaps = 25/644 (3%)

Query: 437  LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
            ++S+Y+R+  L  A  VFD M   +L SW +++S++   G+ + A +LF+ M     + D
Sbjct: 29   MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQ----ERD 84

Query: 497  IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            +I W  +L+   T  + ++       M          + + +L A  E   ++  RE+  
Sbjct: 85   LIAWTIMLTVLATFSNIEDAKYHFDQMPERDL----VAWTAMLAANAERGQMENARETFD 140

Query: 557  YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
             +     + +L+  TSL+  Y ++  ++ A  VFD+M   N+VAW ++++GY   G  V 
Sbjct: 141  QMP----ERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVR 196

Query: 617  AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
            AK+  + M E     DL++W +++S Y+  G  +    I   M       ++++W ++++
Sbjct: 197  AKRAFDSMPER----DLIAWTAMLSAYAFNGHLRYTREIFQRMPER----DLISWATMVA 248

Query: 677  GSLQNENYRESLKFFIQMQQ-----EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
              ++N+   ES + F +M +     + + PN  T  +LL  C  LG L  G++IH    +
Sbjct: 249  ALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAE 308

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
             GF  D  V+  L++ Y + G L  A+ VF     + + SW+ MI  FA  G   EA+ L
Sbjct: 309  RGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMEL 368

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            +H +L  G  PD I F ++L AC NSG+VE    +F S+  D  + PT+EHY+CMVD+LG
Sbjct: 369  YHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLG 428

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L +A D +R MPF P   ++  +L +C+++  +E  E A+  +F+L+P NS+ Y  
Sbjct: 429  RAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYIT 488

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ + + R +D  R+R  M+E G+K     SWI++   VH F A    HP   EIY E
Sbjct: 489  LANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAE 548

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            +  L  +MK+ GY  DT+ V QD++E+EK  +L  H+EKLAI +GL+ T   AP+R++KN
Sbjct: 549  IQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKN 608

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVCSDCH A K +S V GREI +RD  RFHHF+ G CSCND W
Sbjct: 609  LRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/466 (22%), Positives = 193/466 (41%), Gaps = 68/466 (14%)

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM----------- 387
           +G+   VE A ++F  ++D  D   W  ++ +  R+    NA  +F  M           
Sbjct: 2   FGRLGCVERARQIFDAIAD-RDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTAL 60

Query: 388 --------QFSSAKAISRTIVK--------MLQACAKVGAFHEGKQIHGYVLKSALESNL 431
                       AK +  T+ +        ML   A      + K    Y      E +L
Sbjct: 61  LSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAK----YHFDQMPERDL 116

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
                +++  +   ++E A   FD M + NL SW S++S+Y   G V  A  +F+ M   
Sbjct: 117 VAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMP-- 174

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
             + +++ W  +L+G+   G   +V+   R   S+  R +  + + +L A      L+Y 
Sbjct: 175 --EWNLVAWTAMLTGYSLSG---DVVRAKRAFDSMPER-DLIAWTAMLSAYAFNGHLRYT 228

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR---------NIVAWN 602
           RE    I +   + DL    +++   V+ND L+ ++E+FD M            N V + 
Sbjct: 229 RE----IFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFI 284

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
           +L+    F G     +K+   + E     DLV  N+LV+ Y   G   +A ++   M+  
Sbjct: 285 TLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRR 344

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               +V++W+S+IS   Q     E+++ + +M  E   P+     S+L  C   G+++  
Sbjct: 345 ----DVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEAS 400

Query: 723 KEIHCLCLKNGFIKDAYVATGL------IDMYSKSGNLKSAREVFR 762
            +          + D  V   L      +D+  ++G L+ A ++ R
Sbjct: 401 GDFF-----RSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLR 441



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 185/425 (43%), Gaps = 58/425 (13%)

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           M+ +  C++ A+++FD + +R+  +W  ++S Y   G   NAK + ++M     +  L S
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMP----RWSLGS 56

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
           W +L+S +++ G  +EA  +   M+      +++ WT +++      N  ++   F QM 
Sbjct: 57  WTALLSAFALSGHHEEAKTLFDTMQER----DLIAWTIMLTVLATFSNIEDAKYHFDQMP 112

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           + D+       +++L      G ++N +E           ++ +  T L+  Y +SG++K
Sbjct: 113 ERDL----VAWTAMLAANAERGQMENARE----TFDQMPERNLFSWTSLLSAYGRSGDVK 164

Query: 756 SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
           +A  VF       L +W  M+ G+++ G+   A   F  + E     D I +TA+L+A  
Sbjct: 165 AAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPER----DLIAWTAMLSAYA 220

Query: 816 NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP-------- 867
            +G +    + F  M  + ++I     ++ MV  L +   L+E+ +    MP        
Sbjct: 221 FNGHLRYTREIFQRMP-ERDLI----SWATMVAALVENDLLEESKELFDRMPRHCALSKG 275

Query: 868 FKPDATIWGALLGSCRIHGHLE-----YAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
             P+   +  LL +C   G L      +A +A R  F  +   S   N ++N        
Sbjct: 276 MTPNRVTFITLLDACSFLGALAEGRKIHAAVAERG-FDTDLVVS---NALVNFYGRCGAL 331

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            D + +    D +  + V+ WS      ++  F+  G    A      ELYH    M   
Sbjct: 332 GDAKIV---FDGMRRRDVISWS-----SMISAFAQRGRVDEA-----MELYH---RMLSE 375

Query: 983 GYVPD 987
           G +PD
Sbjct: 376 GTLPD 380



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 25/276 (9%)

Query: 239 EFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILT 298
           E G   +A + F     R+   W+S L  Y   G           ++   G +F S    
Sbjct: 128 ERGQMENARETFDQMPERNLFSWTSLLSAYGRSG-----------DVKAAGRVFDSMPEW 176

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFD----FDVHLKCALMNFYGKCRDVESANKLFSE 354
            ++     L  + L  +V  +  KR FD     D+    A+++ Y     +    ++F  
Sbjct: 177 NLVAWTAMLTGYSLSGDVVRA--KRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQR 234

Query: 355 VSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREM----QFSSAKAISR-TIVKMLQACAK 408
           +   E DL+ W  ++   + N+  E + +LF  M      S     +R T + +L AC+ 
Sbjct: 235 MP--ERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSF 292

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +GA  EG++IH  V +   +++L V N L++ Y R   L  A  VFD M+  ++ SW+SM
Sbjct: 293 LGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSM 352

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           IS++   G VD A  L+++M S    PD I +  +L
Sbjct: 353 ISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVL 388



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 181/436 (41%), Gaps = 87/436 (19%)

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           D D +    ++ +Y ++  L NA+ VFD M   ++ +W +L+S +   G    AK + + 
Sbjct: 20  DRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDT 79

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL---Q 680
           M+E     DL++W  +++  + +   ++A      M       ++V WT++++ +    Q
Sbjct: 80  MQER----DLIAWTIMLTVLATFSNIEDAKYHFDQMPER----DLVAWTAMLAANAERGQ 131

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI--------------- 725
            EN RE+   F QM +     N  + +SLL   G  G ++    +               
Sbjct: 132 MENARET---FDQMPER----NLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAM 184

Query: 726 --------HCLCLKNGFI----KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
                     +  K  F     +D    T ++  Y+ +G+L+  RE+F++   + L SW 
Sbjct: 185 LTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWA 244

Query: 774 CMIMGFAIYGNGKEAILLF-----HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            M+         +E+  LF     H  L  G  P+ +TF  LL AC   G + EG K   
Sbjct: 245 TMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHA 304

Query: 829 SMST---DYNIIPT---------------------------IEHYSCMVDLLGKAGYLDE 858
           +++    D +++ +                           +  +S M+    + G +DE
Sbjct: 305 AVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDE 364

Query: 859 AWDFIRTMPFK---PDATIWGALLGSCRIHGHLEYAEIASRRLF---KLEPCNSANYNLM 912
           A +    M  +   PD  I+ ++L +C   G +E +    R +    ++EP    +Y  M
Sbjct: 365 AMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEP-TLEHYACM 423

Query: 913 MNLLAMSNRWEDVERL 928
           +++L  + +  D E L
Sbjct: 424 VDVLGRAGKLRDAEDL 439


>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
 gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
          Length = 719

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/625 (37%), Positives = 353/625 (56%), Gaps = 21/625 (3%)

Query: 460  HNLSS----WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            HNLSS       +ISS +    ++ + ++FN         ++ T+N L+ G  T+  + N
Sbjct: 107  HNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPK----NLFTFNALIRGLTTNSHFFN 162

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
             +   R M   G +P+  +   VL+++  L   + G   H  ILR G++ D +V  SL+D
Sbjct: 163  AIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVD 222

Query: 576  MYVKNDCLQNAQEVFDNMKNR-----NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            MYVK + L +A +VFD    R     + + WN LI G C  G    A K+   M ++E  
Sbjct: 223  MYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKEN- 281

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
               VSW++L+ G++  G    A+ +   M       NVV+WT+++ G  +N +  ++L  
Sbjct: 282  ---VSWSTLIDGFAKNGDMDRAMELFDQMPEK----NVVSWTTMVDGFSRNGDSEKALSM 334

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F +M +E ++PN+ T+ S L  C  +G L+ G  IH     NG      + T L+DMY+K
Sbjct: 335  FSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAK 394

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             GN++SA EVF ++  K++ +W  MI G+AI+G+ ++AI  F +++  G +PD + F AL
Sbjct: 395  CGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLAL 454

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L AC +SG V+ G  +FDSM  DY I P+++HY+ +VD+LG++G L EA  FI  MP  P
Sbjct: 455  LTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNP 514

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            D  IWGAL  +CR H   + A+ A  +L KLEP ++ NY  + N  A   +WED ER+R 
Sbjct: 515  DFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRV 574

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
             M   GV     WS I+++  VH F +    H  +  I  +L  +++   K GY+P T  
Sbjct: 575  LMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEW 634

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
            V  ++++EEK  VL SH EKLA+ + L+ T     IR++KN +VC DCH+  KY S +  
Sbjct: 635  VLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQ 694

Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
            REI LRD  RFHHF++G CSC D W
Sbjct: 695  REIMLRDMKRFHHFKDGSCSCRDHW 719



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 44/387 (11%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           +N +I     N  + NAI  FR M  S  K    T   +L++ A + +   G  IH  +L
Sbjct: 147 FNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMIL 206

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFD---------------------------- 455
           +  +E +  V   L+ MY +  KL  A +VFD                            
Sbjct: 207 RCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSM 266

Query: 456 --------SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
                   +M      SW+++I  +   G +D A  LF++M     + ++++W  ++ G 
Sbjct: 267 KKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMP----EKNVVSWTTMVDGF 322

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
             +G  +  L++   M   G RPN  ++   L A  ++  L+ G   H YI  NGL    
Sbjct: 323 SRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTE 382

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +GT+L+DMY K   +++A EVF   + ++I  W  +I G+   G    A     QM   
Sbjct: 383 ALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFA 442

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRE 686
            IKPD V + +L++     GQ    L     M+ +  I P++  +T ++    ++   +E
Sbjct: 443 GIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKE 502

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +L+F  +M    + P+     +L   C
Sbjct: 503 ALRFIERMP---MNPDFVIWGALFCAC 526



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 143/334 (42%), Gaps = 37/334 (11%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ + K  D++ A +LF ++ + ++ + W  ++    RN   E A+ +F +M     + 
Sbjct: 287 LIDGFAKNGDMDRAMELFDQMPE-KNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRP 345

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
            + TIV  L ACAK+G    G +IH Y+  + L    ++   L+ MY++   +E A+ VF
Sbjct: 346 NAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVF 405

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
              +  ++ +W  MI  +   G+ + A + F +M  + I+PD + +  LL+     G   
Sbjct: 406 GETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVD 465

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
             L     M+              L    E  +  Y                    T ++
Sbjct: 466 IGLNFFDSMR--------------LDYCIEPSMKHY--------------------TLIV 491

Query: 575 DMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           DM  ++  L+ A    + M  N + V W +L            AK  LN++ + E     
Sbjct: 492 DMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLE-PTHT 550

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
            ++  L + Y+  GQ ++A  +   M+N G++ N
Sbjct: 551 GNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKN 584



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 7/229 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  + + GD   A + F     ++   W++ ++ + S  G+ ++ L ++ ++  +GV 
Sbjct: 286 TLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGF-SRNGDSEKALSMFSKMLEEGV- 343

Query: 292 FRSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
            R    TI+  L  C K+     G+ +H  +   G      L  AL++ Y KC ++ESA+
Sbjct: 344 -RPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESAS 402

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           ++F E ++ +    W  +I     +   E AI  F++M F+  K      + +L AC   
Sbjct: 403 EVFGE-TEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHS 461

Query: 410 GAFHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           G    G      + L   +E ++     ++ M  R+ +L+ A R  + M
Sbjct: 462 GQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERM 510


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 997

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 295/957 (30%), Positives = 483/957 (50%), Gaps = 85/957 (8%)

Query: 195  FCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDD-MVKSLIFHYLEFGDFTSAAKAFFLY 253
            F FL +      L   K  HA+++ + +  N +  +V +LI  Y + G  T A + F   
Sbjct: 50   FGFLRDAISTSDLMLGKCTHARILALEE--NPERFLVNNLISMYSKCGSLTYARRVFDKM 107

Query: 254  FSRSYADWSSFLEDY-ESFGGEVQELLEVW--GELHGKGVIFRSRI-LTIILKLCTKLMA 309
              R    W+S L  Y +S  G V+ + E +    +  + V++ SR+ L+ +LKLC     
Sbjct: 108  PERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 167

Query: 310  FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
                   H    K G D D  +  AL+N Y K   V+    LF E+    D +LWN ++ 
Sbjct: 168  VCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMP-YRDVVLWNLMLK 226

Query: 370  VKLRNEKWENAIKLFREMQFS-------SAKAISRTIVKMLQACAKVGAFHEG------- 415
              L     E AI L      S       + + +SR      +A  +V +F  G       
Sbjct: 227  AYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEA-GQVKSFENGNDASAVS 285

Query: 416  ------KQIHGYV---------------LKSALESNLSVCNCLISMYSRNNKLELATRVF 454
                  K + GY+               ++S LE +      +++   R + L L  +V 
Sbjct: 286  EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVH 345

Query: 455  -DSMK---DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
              ++K   D  L+  NS+I+ Y  L  + +A ++FN M+    + D+I+WN +++G    
Sbjct: 346  CMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMS----ERDLISWNSVIAGIAQS 401

Query: 511  GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL-RLLKYGRESHGYILRNGLDYDLYV 569
                  + L   +   G +P+  +++ VL+A + L   L   ++ H + ++     D +V
Sbjct: 402  DLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFV 461

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             T+L+D Y +N C++ A+ +F    N ++VAWN+++SGY          ++   M ++  
Sbjct: 462  STALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGE 520

Query: 630  KPD-------------LVSWN--------SLVSGYSI--WGQSK--EALVIIHHMK---- 660
            + D             L + N        ++ SGY +  W  S   +  V    M     
Sbjct: 521  RSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 580

Query: 661  --NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
              +S   P+ V WT+LISG ++N     +L  F QM+   + P+  T+++L +    L  
Sbjct: 581  AFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTA 640

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            L+ G++IH   LK     D +V T L+DMY+K G++  A  +F++     + +WN M++G
Sbjct: 641  LEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 700

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
             A +G GKEA+ LF ++   G +PD +TF  +L+AC +SGLV E +KY  SM  DY I P
Sbjct: 701  LAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKP 760

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
             IEHYSC+ D LG+AG + EA + I +M  +  A+++  LL +CR+ G  E  +  + +L
Sbjct: 761  EIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKL 820

Query: 899  FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
             +LEP +S+ Y L+ N+ A +++W++++  R  M    VK    +SWI++   +H+F  +
Sbjct: 821  LELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVD 880

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
               +P T  IY ++  ++ ++K+ GYVP+T     D++EEEK + L  H+EKLA+ +GL+
Sbjct: 881  DRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLL 940

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             T    PIRVIKN RVC DCH A KY+S V  REI LRD  RFH F++G CSC D W
Sbjct: 941  STPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/585 (37%), Positives = 330/585 (56%), Gaps = 38/585 (6%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            +P+I  +N ++ G   + S+Q  + +   M+  G  P+  +   +L+A   L   K G +
Sbjct: 70   EPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIK 129

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             HG +++ G + D +V TSL+ +Y K   + NA +VFD++  +N                
Sbjct: 130  LHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKN---------------- 173

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH---MKNSGIYPNVVT 670
                               + +W +++SGY   G+ +EA+ +      + +  +  ++V+
Sbjct: 174  -------------------VAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVS 214

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W+S+I G   N   +E+L  F +M  E  +P+   M  +L  C  LG L+ G     L  
Sbjct: 215  WSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMD 274

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            +N F+ +  + T LIDMY+K G + SA EVFR    K +  WN  I G A+ G+ K A  
Sbjct: 275  RNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFG 334

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF ++ ++G +PD  TF  LL AC ++GLV+EG +YF+SM   + + P IEHY CMVDLL
Sbjct: 335  LFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLL 394

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG+LDEA   +++MP + +A +WGALLG CR+H   +  E   ++L  LEP NS NY 
Sbjct: 395  GRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYV 454

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ + S++WED  ++R  M E G+K V  +SWI++D +VH F      HP + +IY 
Sbjct: 455  LLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYA 514

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            +L  LV ++K  GYVP T  V  DI+EEEK   +  H+EKLAI +GL+ T     IRV+K
Sbjct: 515  KLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVK 574

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH A K++S   GREI +RD  RFH F +G CSC D W
Sbjct: 575  NLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 175/320 (54%), Gaps = 4/320 (1%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VHA+L++ G D D +L   ++ F     +   ++++F +  +  +  L+N +I   + N+
Sbjct: 29  VHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKE-PNIFLFNTMIHGLVLND 87

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            ++ +I+++  M+       S T   +L+ACA++     G ++HG V+K+  ES+  V  
Sbjct: 88  SFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNT 147

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS---SR 492
            L+S+Y +   ++ A +VFD + + N+++W ++IS Y G+G    A  +F +  S     
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGM 207

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++ DI++W+ ++ G+ ++G  +  L L   M + GFRP+  ++  VL A   L  L+ G 
Sbjct: 208 LEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGN 267

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            +   + RN    +  +GT+L+DMY K   + +A EVF  M+ ++IV WN+ ISG    G
Sbjct: 268 WASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSG 327

Query: 613 LFVNAKKMLNQMEEEEIKPD 632
               A  +  QME+  I+PD
Sbjct: 328 HVKAAFGLFGQMEKSGIEPD 347



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 152/338 (44%), Gaps = 39/338 (11%)

Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           F  L  +K  HA ++++G   +S  + K L F +  FG+   + + F      +   +++
Sbjct: 20  FNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSF-NFGNTNYSHRIFHQTKEPNIFLFNT 78

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +          QE +E++  +  +G+   S     +LK C +L+   LG+++H  ++K 
Sbjct: 79  MIHGL-VLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKA 137

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD-------------------------- 357
           G + D  +  +L++ YGKC  +++A K+F ++ +                          
Sbjct: 138 GCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMF 197

Query: 358 ----------LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
                     LE D++ W+ +I     N   + A+ LF +M     +     +V +L AC
Sbjct: 198 RRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCAC 257

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           A++GA   G      + ++    N  +   LI MY++  +++ A  VF  M+  ++  WN
Sbjct: 258 ARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWN 317

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           + IS     G+V  A+ LF +M  S I+PD  T+  LL
Sbjct: 318 AAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLL 355



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 28/185 (15%)

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
           G   L++ K +H   L+ G  +D+Y+   ++      GN   +  +F ++    +  +N 
Sbjct: 19  GFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNT 78

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC----------KNSGLVEEGW 824
           MI G  +  + +E+I ++H + + G  PD+ TF  LL AC          K  GLV +  
Sbjct: 79  MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL----- 879
              D+              + +V L GK G++D A+     +P K +   W A++     
Sbjct: 139 CESDAFVN-----------TSLVSLYGKCGFIDNAFKVFDDIPEK-NVAAWTAIISGYIG 186

Query: 880 -GSCR 883
            G CR
Sbjct: 187 VGKCR 191


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
          Length = 734

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/742 (33%), Positives = 378/742 (50%), Gaps = 106/742 (14%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            +K+L  C  +  F   KQIH +++K+ L + L   + LI                     
Sbjct: 33   LKLLSKCQSIRTF---KQIHAHIIKTGLHNTLFALSKLIEF------------------- 70

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
                      S+ +  G +  A SLFN +     +P++  WN ++ G     S    L  
Sbjct: 71   ----------SAVSRSGDISYAISLFNSIE----EPNLFIWNSMIRGLSMSLSPALALVF 116

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
               M   G  PN  +   +L++  +L     G++ H ++L+ G   D+++ TSL++MY +
Sbjct: 117  FVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 176

Query: 580  NDCLQNAQ-------------------------------EVFDNMKNRNIVAWNSLISGY 608
            +  + NAQ                               ++FD M  +++V+WN++I+GY
Sbjct: 177  SGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGY 236

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPD----------------------LVSW---------- 636
               G    A  +   M +  + P+                      + SW          
Sbjct: 237  AQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL 296

Query: 637  ---NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
               N+L+  YS  G  + A  +   M    +  +V++W  +I G     +Y+E+L  F +
Sbjct: 297  KLVNALIDMYSKCGDLQTARELFDDM----LERDVISWNVMIGGYTHMCSYKEALALFRE 352

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            M    ++P   T  S+L +C  LG +  GK IH    KN       ++T LID+Y+K GN
Sbjct: 353  MLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGN 412

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            + +AR+VF     K+LASWN MI G A++G   +A  LF ++   G +P+ ITF  +L+A
Sbjct: 413  IVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSA 472

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            CK++GLV+ G ++F SM  DY I P  +HY CM+DLLG+AG  +EA   ++ M  KPD  
Sbjct: 473  CKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGA 532

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            IWG+LLG+CR HG +E  E+ + RLF+LEP N   Y L+ N+ A + +W+DV R+R  ++
Sbjct: 533  IWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLN 592

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            + G+K V   + I++D +VH F      HP + +IY  L  +  ++K  G+V DT  V  
Sbjct: 593  DRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLY 652

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D+DEE K   L  H+EKLAI +GL+ TK   PIR+IKN RVC +CH+A K +S +  REI
Sbjct: 653  DMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREI 712

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
              RD  RFHHF++G CSCND W
Sbjct: 713  IARDRNRFHHFKDGSCSCNDYW 734



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 201/467 (43%), Gaps = 71/467 (15%)

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC------ 342
           GV   S     +LK C KL +   G ++HA ++K GF  DV +  +L+N Y +       
Sbjct: 124 GVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNA 183

Query: 343 ---------RD----------------VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
                    RD                ++ A +LF E+  ++D + WN +I    +  + 
Sbjct: 184 QLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMP-VKDVVSWNAMIAGYAQMGRS 242

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           + A+ LF +M+ ++      TIV +L ACA+  A   G  +  ++    L SNL + N L
Sbjct: 243 KEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNAL 302

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           I M                               Y+  G +  A  LF+ M    ++ D+
Sbjct: 303 IDM-------------------------------YSKCGDLQTARELFDDM----LERDV 327

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
           I+WN ++ G+    SY+  L L R M + G  P   +   +L +   L  +  G+  H Y
Sbjct: 328 ISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAY 387

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           I +N       + TSL+D+Y K   +  A++VFD MK +++ +WN++I G    G    A
Sbjct: 388 INKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKA 447

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLIS 676
            ++ ++M  + I+P+ +++  ++S     G           M ++  I P    +  +I 
Sbjct: 448 FELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMID 507

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              +   + E+      +Q  ++KP+     SLL  C   G ++ G+
Sbjct: 508 LLGRAGLFEEAESL---LQNMEVKPDGAIWGSLLGACRDHGRVELGE 551



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 142/276 (51%), Gaps = 4/276 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y  +G    A + F     +    W++ +  Y   G   + LL ++ ++    V 
Sbjct: 200 ALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALL-LFEDMRKANVP 258

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C +  A  LG  + + +  RG   ++ L  AL++ Y KC D+++A +L
Sbjct: 259 PNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAREL 318

Query: 352 FSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           F ++  LE D++ WN +I        ++ A+ LFREM  S  +    T + +L +CA +G
Sbjct: 319 FDDM--LERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLG 376

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A   GK IH Y+ K+    + S+   LI +Y++   +  A +VFD MK  +L+SWN+MI 
Sbjct: 377 AIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMIC 436

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
                G  D A+ LF+KM+S  I+P+ IT+  +LS 
Sbjct: 437 GLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSA 472



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 22/259 (8%)

Query: 699 IKPNSTTMSSLLQTCGGLGLL------QNGKEIHCLCLKNGFIKDAYVATGLIDM--YSK 750
           + P+S     +LQ    L LL      +  K+IH   +K G     +  + LI+    S+
Sbjct: 16  VLPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSR 75

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
           SG++  A  +F       L  WN MI G ++  +   A++ F  ++ +G +P++ TF  L
Sbjct: 76  SGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFL 135

Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
           L +C       EG K   +       +  +  ++ ++++  ++G ++ A        F+ 
Sbjct: 136 LKSCAKLASAHEG-KQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFR- 193

Query: 871 DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNR-------W 922
           DA  + AL+    + G+++ A    R+LF   P  +  ++N M+   A   R       +
Sbjct: 194 DAISFTALIAGYALWGYMDRA----RQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLF 249

Query: 923 EDVERLRHSMDEVGVKSVL 941
           ED+ +     +E  + SVL
Sbjct: 250 EDMRKANVPPNESTIVSVL 268


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/621 (36%), Positives = 355/621 (57%), Gaps = 10/621 (1%)

Query: 459  DHNLSSWNSM-ISSYTGLGYVDVAWS---LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            DH+L S  S+ I            WS   +F+++     + +++ +N ++  +  +  Y 
Sbjct: 64   DHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIP----KKNVVFFNVMIRSYVNNHLYS 119

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
            + L + + M   G  P+  +   VL+A +    L  G + H  ++R GLD +++VG  L+
Sbjct: 120  DALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLI 179

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
             MY K  CL  A  V D M  R++V+WNSL++G    G F +A ++  +ME   +KPD  
Sbjct: 180  SMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAG 239

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
            +  SL+   +       + V    MK +    ++V+W  +I+  + N    E++  F+QM
Sbjct: 240  TMASLLPAVTNTCLDNVSFVKEMFMKLAN--KSLVSWNVMIAVYMNNSMPAEAVDIFLQM 297

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
            +   + P++ +++S+L  CG L  L  G+ IH   ++     +  +   LIDMY+K G L
Sbjct: 298  EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCL 357

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            + AREVF +   + + SW  MI  + + G G++A+ LF  + + G  PD+I F ++L+AC
Sbjct: 358  EYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSAC 417

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
             ++GL++EG  YF  M+ +  I+P IEH+ CMVDLLG+AG +DEA+ FI+ MP +P+  +
Sbjct: 418  SHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERV 477

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            WGALL +CR++ ++    +A+ +LF+L P  S  Y L+ N+ A + RWEDV  +R  M  
Sbjct: 478  WGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKT 537

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
             G+K +   S  ++D  VH F A    HP + +IY EL   V +MK+ GYVP+T     D
Sbjct: 538  KGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHD 597

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
            ++EE+K   L  H+EKLAI + ++ T   +PIR+ KN RVC DCH AAK +S + GREI 
Sbjct: 598  VEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREIT 657

Query: 1055 LRDGARFHHFREGECSCNDCW 1075
            +RD  RFHHF  G CSC D W
Sbjct: 658  IRDTNRFHHFYNGVCSCGDYW 678



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 217/491 (44%), Gaps = 56/491 (11%)

Query: 325 FDFDVH----LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            D D+H    L   LM  Y  C +  S   +F E+   ++ + +N +I   + N  + +A
Sbjct: 63  IDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK-KNVVFFNVMIRSYVNNHLYSDA 121

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           + +F+ M          T   +L+A +       G QIH  V++  L+ N+ V N LISM
Sbjct: 122 LLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISM 181

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD---- 496
           Y +   L  A RV D M   ++ SWNS+++     G  D A  +  +M    ++PD    
Sbjct: 182 YGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTM 241

Query: 497 -----------------------------IITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
                                        +++WN +++ +  +      + +   M+   
Sbjct: 242 ASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA 301

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             P+  S++ VL A  +L  L  GR  H Y++R  L  +L +  +L+DMY K  CL+ A+
Sbjct: 302 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 361

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
           EVFD MK R++V+W S+IS Y   G   +A  + ++M++  + PD +++ S++S  S  G
Sbjct: 362 EVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAG 421

Query: 648 QSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
              E       M +   I P +  +  ++    +     E+  F  QM  E   PN    
Sbjct: 422 LLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPME---PNERVW 478

Query: 707 SSLLQTCGG-----LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAR 758
            +LL  C       +GLL   +       ++G+    YV   L ++Y+K+G   ++ + R
Sbjct: 479 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGY----YVL--LSNIYAKAGRWEDVTTVR 532

Query: 759 EVFRKSANKTL 769
            + +    K +
Sbjct: 533 SIMKTKGIKKM 543



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 139/315 (44%), Gaps = 46/315 (14%)

Query: 277 ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALM 336
           + L V+  + G G+         +LK  +     W+G+++HA++++ G D +V +   L+
Sbjct: 120 DALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLI 179

Query: 337 NFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS 396
           + YGKC  +  A ++  ++    D + WN ++    RN ++++A+++ +EM+    K  +
Sbjct: 180 SMYGKCGCLVEACRVLDQMP-CRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDA 238

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            T+  +L A            +    +K A +S +S  N +I++Y  N+    A  +F  
Sbjct: 239 GTMASLLPAVTNT-CLDNVSFVKEMFMKLANKSLVS-WNVMIAVYMNNSMPAEAVDIFLQ 296

Query: 457 MKDH---------------------------------------NLSSWNSMISSYTGLGY 477
           M+DH                                       NL   N++I  Y   G 
Sbjct: 297 MEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGC 356

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
           ++ A  +F++M       D+++W  ++S +  +G  ++ ++L   MQ LG  P+  +   
Sbjct: 357 LEYAREVFDQMKFR----DVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVS 412

Query: 538 VLQAVTELRLLKYGR 552
           VL A +   LL  GR
Sbjct: 413 VLSACSHAGLLDEGR 427



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 127/296 (42%), Gaps = 16/296 (5%)

Query: 242 DFTSAAKAFFLYFS-RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           D  S  K  F+  + +S   W+  +  Y +      E ++++ ++    V   +  +  +
Sbjct: 254 DNVSFVKEMFMKLANKSLVSWNVMIAVYMN-NSMPAEAVDIFLQMEDHAVDPDAISIASV 312

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L  C  L A  LG  +H  ++++    ++ L+ AL++ Y KC  +E A ++F ++    D
Sbjct: 313 LPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMK-FRD 371

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
            + W  +I     N K  +A+ LF  MQ       S   V +L AC+  G   EG+    
Sbjct: 372 VVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR---- 427

Query: 421 YVLKSALESNLSVCN-----CLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTG 474
           Y  K   E    V       C++ +  R  +++ A      M  + N   W +++S+   
Sbjct: 428 YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACR- 486

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFR 529
             Y ++   L       ++ P+   +  LLS  +   G +++V T+   M++ G +
Sbjct: 487 -VYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 541



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 17/230 (7%)

Query: 723 KEIHC-LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           K++H  +C+ +    +  +   L+  Y+  G   S R +F +   K +  +N MI  +  
Sbjct: 55  KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS---MSTDYNIIP 838
                +A+L+F  +   G  PD  T+  +L A   S  +  G +   +   +  D N+  
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 174

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA-EIASR- 896
                + ++ + GK G L EA   +  MP + D   W +L+  C  +G  + A E+    
Sbjct: 175 G----NGLISMYGKCGCLVEACRVLDQMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEM 229

Query: 897 RLFKLEPCNSANYNLMMNLL-AMSNR-WEDVERLRHSMDEVGVKSVLVWS 944
            L  L+P    +   M +LL A++N   ++V  ++    ++  KS++ W+
Sbjct: 230 ELLGLKP----DAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWN 275


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g15930-like [Cucumis
            sativus]
          Length = 744

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/766 (31%), Positives = 391/766 (51%), Gaps = 83/766 (10%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNF-----YGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
            +VH   IK+G + +  L+  +M F     YG   D + A +LF E+ +  +  +WN +I 
Sbjct: 57   QVHCQAIKKGLNANPVLQNRVMTFCCTHEYG---DFQYARRLFDEIPE-PNLFIWNTMIR 112

Query: 370  VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
               R +  +  + L+ EM     K    T   + +   +  A   G+Q+HG+VLK  L+ 
Sbjct: 113  GYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQY 172

Query: 430  NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
            N+ V   L+ MY    +L+ A  VFD                                  
Sbjct: 173  NVFVHTALVQMYLLCGQLDTARGVFDVCP------------------------------- 201

Query: 490  SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                + D+ITWN ++S +   G ++    L   M+     P   ++ +VL A ++L+ L+
Sbjct: 202  ----KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLR 257

Query: 550  YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
             G++ H Y+    ++ +L +  +++DMY     + +A  +F +M NR             
Sbjct: 258  TGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR------------- 304

Query: 610  FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                                  D++SW ++VSG++  G+   A      M       + V
Sbjct: 305  ----------------------DIISWTTIVSGFTNLGEIDVARNYFDKMPEK----DYV 338

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +WT++I G +++  ++E+L+ F  MQ  ++KP+  TM S+L  C  LG L+ G+ I    
Sbjct: 339  SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
             +N    D +V   LIDMY K G++  A  +FR+ + +   +W  MI+G A+ G+G++A+
Sbjct: 399  DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 458

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             +F  +L+    PD IT+  +L+AC ++GLV++G KYF  M++ + I P I HY C+VDL
Sbjct: 459  DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 518

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L +AG L EA++ I  MP K ++ +WGALL  CR++   + AE+  +++ +LEP N A Y
Sbjct: 519  LARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVY 578

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N+ A   RW D+  LR  M + G+K     S I+++  VH F A    HP T  I 
Sbjct: 579  VLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNID 638

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             +L  +  ++K  GY PD   V+ DI EE+K   +  H+EKLAI +GL+ +     IR+ 
Sbjct: 639  AKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRIT 698

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN R+C DCH  AK +S V  RE+ +RD  RFHHF+ G CSC D W
Sbjct: 699  KNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 267/566 (47%), Gaps = 35/566 (6%)

Query: 157 QNRHSHKPNSITN-SPTSLAL----PPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVK 211
            +RH  KP  +T  + TS AL    PPT  L    + +C S              +  ++
Sbjct: 12  HHRHVKKPKQMTTIAATSSALKSFSPPTHPLISLLE-TCES--------------MDQLQ 56

Query: 212 SKHAQMIKMGKIWNSDDMVKSLIFHYL---EFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
             H Q IK G   N++ ++++ +  +    E+GDF  A + F      +   W++ +  Y
Sbjct: 57  QVHCQAIKKG--LNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGY 114

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
                  Q  + ++ E+  +GV         + K  T+ +A   G ++H  ++K G  ++
Sbjct: 115 SRLDFP-QLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYN 173

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V +  AL+  Y  C  +++A  +F +V    D + WN II    +  K+E + +LF  M+
Sbjct: 174 VFVHTALVQMYLLCGQLDTARGVF-DVCPKADVITWNMIISAYNKVGKFEESRRLFLVME 232

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                  + T+V +L AC+K+     GK++H YV    +ESNL + N +I MY+   +++
Sbjct: 233 DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMD 292

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A  +F SM + ++ SW +++S +T LG +DVA + F+KM     + D ++W  ++ G+ 
Sbjct: 293 SALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP----EKDYVSWTAMIDGYI 348

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
               ++  L L R MQ+   +P+  ++  VL A   L  L+ G     YI RN +  DL+
Sbjct: 349 RSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLF 408

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           V  +L+DMY K   +  A+ +F  M  R+   W ++I G    G    A  M + M +  
Sbjct: 409 VRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKAS 468

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRES 687
           I PD +++  ++S  +  G   +       M +  GI PN+  +  L+    +    +E+
Sbjct: 469 ILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEA 528

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +    M    IK NS    +LL  C
Sbjct: 529 YEVIENMP---IKANSIVWGALLAGC 551



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM--YSKSGNLKSAR 758
           P +  + SLL+TC  +  LQ   ++HC  +K G   +  +   ++      + G+ + AR
Sbjct: 37  PPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYAR 93

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            +F +     L  WN MI G++     +  + L+ E+L  G +PD  TF  L        
Sbjct: 94  RLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 153

Query: 819 LVEEGWKYFDSM---STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            +E G +    +      YN+      ++ +V +    G LD A       P K D   W
Sbjct: 154 ALEYGRQLHGHVLKHGLQYNVFV----HTALVQMYLLCGQLDTARGVFDVCP-KADVITW 208

Query: 876 GALLGSCRIHGHLEYAEIASRRLF 899
             ++ +    G  E     SRRLF
Sbjct: 209 NMIISAYNKVGKFE----ESRRLF 228


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/766 (31%), Positives = 391/766 (51%), Gaps = 83/766 (10%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNF-----YGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
            +VH   IK+G + +  L+  +M F     YG   D + A +LF E+ +  +  +WN +I 
Sbjct: 36   QVHCQAIKKGLNANPVLQNRVMTFCCTHEYG---DFQYARRLFDEIPE-PNLFIWNTMIR 91

Query: 370  VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
               R +  +  + L+ EM     K    T   + +   +  A   G+Q+HG+VLK  L+ 
Sbjct: 92   GYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQY 151

Query: 430  NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
            N+ V   L+ MY    +L+ A  VFD                                  
Sbjct: 152  NVFVHTALVQMYLLCGQLDTARGVFDVCP------------------------------- 180

Query: 490  SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                + D+ITWN ++S +   G ++    L   M+     P   ++ +VL A ++L+ L+
Sbjct: 181  ----KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLR 236

Query: 550  YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
             G++ H Y+    ++ +L +  +++DMY     + +A  +F +M NR             
Sbjct: 237  TGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR------------- 283

Query: 610  FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                                  D++SW ++VSG++  G+   A      M       + V
Sbjct: 284  ----------------------DIISWTTIVSGFTNLGEIDVARNYFDKMPEK----DYV 317

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +WT++I G +++  ++E+L+ F  MQ  ++KP+  TM S+L  C  LG L+ G+ I    
Sbjct: 318  SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
             +N    D +V   LIDMY K G++  A  +FR+ + +   +W  MI+G A+ G+G++A+
Sbjct: 378  DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 437

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             +F  +L+    PD IT+  +L+AC ++GLV++G KYF  M++ + I P I HY C+VDL
Sbjct: 438  DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 497

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L +AG L EA++ I  MP K ++ +WGALL  CR++   + AE+  +++ +LEP N A Y
Sbjct: 498  LARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVY 557

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N+ A   RW D+  LR  M + G+K     S I+++  VH F A    HP T  I 
Sbjct: 558  VLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNID 617

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             +L  +  ++K  GY PD   V+ DI EE+K   +  H+EKLAI +GL+ +     IR+ 
Sbjct: 618  AKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRIT 677

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN R+C DCH  AK +S V  RE+ +RD  RFHHF+ G CSC D W
Sbjct: 678  KNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  202 bits (514), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 247/511 (48%), Gaps = 15/511 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYL---EFGDFTSAAKAFFLYFSRSYADWSS 263
           +  ++  H Q IK G   N++ ++++ +  +    E+GDF  A + F      +   W++
Sbjct: 31  MDQLQQVHCQAIKKG--LNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNT 88

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +  Y       Q  + ++ E+  +GV         + K  T+ +A   G ++H  ++K 
Sbjct: 89  MIRGYSRLDFP-QLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKH 147

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G  ++V +  AL+  Y  C  +++A  +F +V    D + WN II    +  K+E + +L
Sbjct: 148 GLQYNVFVHTALVQMYLLCGQLDTARGVF-DVCPKADVITWNMIISAYNKVGKFEESRRL 206

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F  M+       + T+V +L AC+K+     GK++H YV    +ESNL + N +I MY+ 
Sbjct: 207 FLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYAD 266

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
             +++ A  +F SM + ++ SW +++S +T LG +DVA + F+KM     + D ++W  +
Sbjct: 267 CGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP----EKDYVSWTAM 322

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           + G+     ++  L L R MQ+   +P+  ++  VL A   L  L+ G     YI RN +
Sbjct: 323 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 382

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             DL+V  +L+DMY K   +  A+ +F  M  R+   W ++I G    G    A  M + 
Sbjct: 383 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 442

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNE 682
           M +  I PD +++  ++S  +  G   +       M +  GI PN+  +  L+    +  
Sbjct: 443 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG 502

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +E+ +    M    IK NS    +LL  C
Sbjct: 503 RLKEAYEVIENMP---IKANSIVWGALLAGC 530



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM--YSKSGNLKSAR 758
           P +  + SLL+TC  +  LQ   ++HC  +K G   +  +   ++      + G+ + AR
Sbjct: 16  PPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYAR 72

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            +F +     L  WN MI G++     +  + L+ E+L  G +PD  TF  L        
Sbjct: 73  RLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 132

Query: 819 LVEEGWKYFDSM---STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            +E G +    +      YN+      ++ +V +    G LD A       P K D   W
Sbjct: 133 ALEYGRQLHGHVLKHGLQYNVFV----HTALVQMYLLCGQLDTARGVFDVCP-KADVITW 187

Query: 876 GALLGSCRIHGHLEYAEIASRRLF 899
             ++ +    G  E     SRRLF
Sbjct: 188 NMIISAYNKVGKFE----ESRRLF 207


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/712 (34%), Positives = 371/712 (52%), Gaps = 77/712 (10%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC-LISMYSRNNKLELATRVFDSMKDH 460
            +LQAC +      G+++H  V  S    N  V N  +I+MYS       +  VFD ++  
Sbjct: 111  LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNS-SRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            NL  WN+++S+YT     + A S+F+++ S +  +PD  T  C                 
Sbjct: 171  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPC----------------- 213

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
                              V++A   L  L  G+  HG   +  L  D++VG +L+ MY K
Sbjct: 214  ------------------VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 255

Query: 580  NDCLQNA-QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
               ++ A + VFD M  + + +WN+L+ GY        A  +  QM +  + PD  +  S
Sbjct: 256  CGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGS 315

Query: 639  LV-----------------------------------SGYSIWGQSKEALVIIHHMKNSG 663
            L+                                   S Y   G+   A V+   M+   
Sbjct: 316  LLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGME--- 372

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             + ++V+W  +I+G  QN    E++  F QM  + I+P    +  +   C  L  L+ GK
Sbjct: 373  -HRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGK 431

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            E+HC  LK    +D +V++ +IDMY+K G +  ++ +F +   K +ASWN +I G+ I+G
Sbjct: 432  ELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHG 491

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
             GKEA+ LF ++L  G +PD  TFT +L AC ++GLVE+G +YF+ M   +NI P +EHY
Sbjct: 492  RGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY 551

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +C+VD+LG+AG +D+A   I  MP  PD+ IW +LL SCRIHG+L   E  + +L +LEP
Sbjct: 552  TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEP 611

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
                NY L+ NL A S +W+DV R+R  M ++G++     SWI++   VH F       P
Sbjct: 612  EKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLP 671

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
               E+      L  ++  +GY PDT  V  D++EE+K  +L  H+EKLAI +GL+ T   
Sbjct: 672  ELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKG 731

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             P+RV KN R+C DCH AAK++S V  R+I +RD  RFHHFR+G CSC D W
Sbjct: 732  LPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 233/534 (43%), Gaps = 84/534 (15%)

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF--DVHLKCALMNFYGKCRDVESANK 350
           RS  + ++L+ C +     +G  +H  ++     F  D  L   ++  Y  C     +  
Sbjct: 104 RSEAMGVLLQACGQRKDIEVGRRLH-EMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRM 162

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKV 409
           +F ++   ++   WN I+    RNE +E+A+ +F E+   +  K  + T+  +++ACA +
Sbjct: 163 VFDKLRR-KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGL 221

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT-RVFDSMKDHNLSSWNSM 468
                G+ IHG   K  L S++ V N LI+MY +   +E A  RVFD M    +SS    
Sbjct: 222 LDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSS---- 277

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                                          WN LL G+  +   +  L L   M   G 
Sbjct: 278 -------------------------------WNALLCGYAQNSDPRKALDLYLQMTDSGL 306

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            P+  ++  +L A + ++ L YG E HG+ LRNGL  D ++G SL+ +Y+       AQ 
Sbjct: 307 DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQV 366

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP----------------- 631
           +FD M++R++V+WN +I+GY   GL   A  +  QM  + I+P                 
Sbjct: 367 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 426

Query: 632 ------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                             D+   +S++  Y+  G    +  I   ++      +V +W  
Sbjct: 427 LRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK----DVASWNV 482

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI--HCLCLK 731
           +I+G   +   +E+L+ F +M +  +KP+  T + +L  C   GL+++G E     L L 
Sbjct: 483 IIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLH 542

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWNCMIMGFAIYGN 784
           N   K  +  T ++DM  ++G +  A R +     +     W+ ++    I+GN
Sbjct: 543 NIEPKLEHY-TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGN 595



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 214/475 (45%), Gaps = 50/475 (10%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFF-LYFSRSYADWSSFLEDYESF 271
           H    KM  +  SD  V  +LI  Y + G    A K  F L  +++ + W++ L  Y   
Sbjct: 231 HGMATKMDLV--SDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQ- 287

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
             + ++ L+++ ++   G+      +  +L  C+++ +   G E+H   ++ G   D  +
Sbjct: 288 NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFI 347

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             +L++ Y  C    +A  LF  + +    + WN +I    +N   + AI LFR+M    
Sbjct: 348 GISLLSLYICCGKPFAAQVLFDGM-EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG 406

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +     I+ +  AC+++ A   GK++H + LK+ L  ++ V + +I MY++   + L+ 
Sbjct: 407 IQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQ 466

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           R+FD +++ +++SWN +I+ Y   G    A  LF KM                       
Sbjct: 467 RIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM----------------------- 503

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR-NGLDYDLYVG 570
                   LR    LG +P+  + + +L A +   L++ G E    +L  + ++  L   
Sbjct: 504 --------LR----LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY 551

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQ-MEEEE 628
           T ++DM  +   + +A  + + M  + +   W+SL+S     G     +K+ N+ +E E 
Sbjct: 552 TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEP 611

Query: 629 IKPD-LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV-VTWTSLISGSLQN 681
            KP+  V  ++L +G   W   +    +   MK+ G+  +   +W   + G + N
Sbjct: 612 EKPENYVLISNLFAGSGKWDDVRR---VRGRMKDIGLQKDAGCSWIE-VGGKVHN 662



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 10/207 (4%)

Query: 680 QNENYRESLKFFIQMQQEDI----KPNSTTMSSLLQTCGGLGLLQNGKEIH-CLCLKNGF 734
           ++ N +E+L F +Q + +D+       S  M  LLQ CG    ++ G+ +H  +     F
Sbjct: 79  ESGNLKEALDF-LQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQF 137

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
             D  + T +I MYS  G+   +R VF K   K L  WN ++  +      ++A+ +F E
Sbjct: 138 CNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSE 197

Query: 795 LLE-TGFQPDAITFTALLAACKNSGLVEEGW-KYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
           L+  T  +PD  T   ++ AC  +GL++ G  +    M+T  +++  +   + ++ + GK
Sbjct: 198 LISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 255

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALL 879
            G ++EA   +  +      + W ALL
Sbjct: 256 CGLVEEAVKRVFDLMDTKTVSSWNALL 282


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Cucumis sativus]
          Length = 990

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 262/811 (32%), Positives = 404/811 (49%), Gaps = 71/811 (8%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            ++K CT      LG  VH   +K G   D+ +  A++  YGKC  ++ A +LF ++ + +
Sbjct: 216  LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPE-Q 274

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS--RTIVKMLQACAKVGAFHEGKQ 417
            + + WN +I     N  W  A + FR +  S    I    T+V +L  C+  G    G  
Sbjct: 275  NLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMV 334

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            IHG  +K  L   L VCN LI M                               Y+  G 
Sbjct: 335  IHGMAVKLGLVHELMVCNALIDM-------------------------------YSKCGC 363

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSV 535
            +  A  LF K+ +      +++WN ++  +   G       LLR M  +      N  ++
Sbjct: 364  LSEAAILFRKIENK----SVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              +L A  E   L   R  HGY LR+   Y   +  + +  Y K   L  A+ VF  M  
Sbjct: 420  LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSK 650
            +++ +WN++I G+   G  + A     +M    I PD  S  SL+      G   +G+  
Sbjct: 480  KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539

Query: 651  EALVIIHHMKNSGIYP--------------------------NVVTWTSLISGSLQNENY 684
               V+ + ++ +                              N V W +++SG  QNE  
Sbjct: 540  HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELP 599

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L  F QM  + ++P+   ++S+L  C  L  L  GKE+HC  LKN  ++D +VA  L
Sbjct: 600  NEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSL 659

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMY+KSG L  ++ +F +   K +ASWN MI GF ++G G +A+ LF ++  +  QPD 
Sbjct: 660  MDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDR 719

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
             TF  +L AC ++GLV EG  Y   M T Y + P +EHY+C++D+LG+AG L+EA +FI 
Sbjct: 720  FTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFIN 779

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP +PDA IW +LL S   +  LE  E  + +L  LE   + +Y L+ NL A + +W+ 
Sbjct: 780  EMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDV 839

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V  +R  M ++ ++  +  SWI++   V+ F A    +P++ EI      L  ++ ++GY
Sbjct: 840  VRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGY 899

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PD  CV  +++E EK K+L  H+EK+AI +G + TK    +R+ KN R+C DCH AAKY
Sbjct: 900  TPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKY 959

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S    REI +RD  RFHHF++G CSC D W
Sbjct: 960  ISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  199 bits (506), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 286/651 (43%), Gaps = 73/651 (11%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL-IKRGFDFDVHL 331
           G +  L   W    G  +  R   + ++L+ C +     +G ++   L +   F  D  L
Sbjct: 86  GALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVL 145

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREM-QF 389
              L+  Y  C     +  +F  +  L  +L  WN ++   +RNE ++ AI  F E+   
Sbjct: 146 NTRLITMYSICGYPLESRLVFDRL--LNKNLFQWNALVSGYVRNELYDEAIHTFLELISV 203

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           +  +  + T   +++AC      H GK +HG  +K  L  +L V N +I++Y +   L+ 
Sbjct: 204 TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDE 263

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  +FD M + NL SWNS+I  ++  G+   A+  F  +              L SG   
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSL--------------LESGD-- 307

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                            G  P+ +++  +L   +    +  G   HG  ++ GL ++L V
Sbjct: 308 -----------------GLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMV 350

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE- 628
             +L+DMY K  CL  A  +F  ++N+++V+WNS+I  Y  +G       +L +M  EE 
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410

Query: 629 -----------IKPDLVSWNSLVS-----GYSIWG--QSKE--------------ALVII 656
                      + P  +  + L+S     GYS+    Q KE              +LV  
Sbjct: 411 LMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFA 470

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            H+       +V +W ++I G  QN +  ++L F+ +M +  I P+  ++ SLL  CG L
Sbjct: 471 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRL 530

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
           GLLQ GKEIH   L+NG   +++VA  L+ +Y         R  F    +K    WN M+
Sbjct: 531 GLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAML 590

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
            G++      EA+ LF ++L  G +PD I   ++L AC     +  G K     +   ++
Sbjct: 591 SGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG-KEVHCFALKNSL 649

Query: 837 IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           +        ++D+  K+G+L  +      +  K  A+ W  ++    +HG 
Sbjct: 650 MEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS-WNVMITGFGVHGQ 699



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 231/558 (41%), Gaps = 95/558 (17%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF----- 264
           KS H   +KMG I   D  V  ++I  Y + G    A + F     ++   W+S      
Sbjct: 230 KSVHGMAVKMGLIM--DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFS 287

Query: 265 -----LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHAS 319
                LE Y +F    + LLE      G G+I     +  +L +C+      +G+ +H  
Sbjct: 288 ENGFWLEAYRAF----RSLLE-----SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGM 338

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            +K G   ++ +  AL++ Y KC  +  A  LF ++ + +  + WN +I    R      
Sbjct: 339 AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN-KSVVSWNSMIGAYSREGFVFE 397

Query: 380 AIKLFREMQFSSA--KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
              L R+M       +    TI+ +L AC +       + +HGY L+ + +    + N  
Sbjct: 398 TFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAF 457

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           I+ Y++   L  A  VF  M   ++SSWN++I                            
Sbjct: 458 IAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVI---------------------------- 489

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                   GH  +G     L     M  LG  P+  S+  +L A   L LL+YG+E HG+
Sbjct: 490 -------GGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGF 542

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           +LRNGL+ + +V  SL+ +Y         +  F+ M ++N V WN+++SGY    L   A
Sbjct: 543 VLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEA 602

Query: 618 KKMLNQMEEEEIKPDLVSWNSLV---SGYSIWGQSKEALVIIHHMKNSGIYPN------- 667
             +  QM  + ++PD ++  S++   S  S  G  KE  V    +KNS +  N       
Sbjct: 603 LSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKE--VHCFALKNSLMEDNFVACSLM 660

Query: 668 -----------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                  V +W  +I+G   +    ++++ F  M++ D +P+  
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720

Query: 705 TMSSLLQTCGGLGLLQNG 722
           T   +LQ C   GL+  G
Sbjct: 721 TFLGVLQACCHAGLVSEG 738



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 171/382 (44%), Gaps = 33/382 (8%)

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           D V    L++ YSI G   E+ ++   + N     N+  W +L+SG ++NE Y E++  F
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNK----NLFQWNALVSGYVRNELYDEAIHTF 197

Query: 692 IQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
           +++    + +P++ T   L++ C G   +  GK +H + +K G I D +V   +I +Y K
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGK 257

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET--GFQPDAITFT 808
            G L  A E+F K   + L SWN +I GF+  G   EA   F  LLE+  G  PD  T  
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMV 317

Query: 809 ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            LL  C   G V+ G      M+    ++  +   + ++D+  K G L EA    R +  
Sbjct: 318 TLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN 376

Query: 869 KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA--------MSN 920
           K   + W +++G+    G +       R+++  E     N   ++NLL         +S 
Sbjct: 377 KSVVS-WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSL 435

Query: 921 RWEDVERLRHSMD-EVGVKSVLVWSWIQIDQIV---HVF-----------SAEGAPHPAT 965
           R      LRHS   +  + +  + ++ +   +V   HVF           +A    H   
Sbjct: 436 RALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQN 495

Query: 966 GEIYFELYHLVSEMKKLGYVPD 987
           G+    L     EM +LG +PD
Sbjct: 496 GDPIKAL-DFYFEMTRLGILPD 516



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 140/296 (47%), Gaps = 4/296 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           + I  Y + G    A   FF   ++S + W++ +  +   G  ++ L + + E+   G++
Sbjct: 456 AFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKAL-DFYFEMTRLGIL 514

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C +L     G E+H  +++ G + +  +  +L++ Y  C         
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTY 574

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + D ++ + WN ++    +NE    A+ LFR+M     +     I  +L AC+++ A
Sbjct: 575 FETMGD-KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA 633

Query: 412 FHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
              GK++H + LK++L E N   C+ L+ MY+++  L  + R+F+ +    ++SWN MI+
Sbjct: 634 LGLGKEVHCFALKNSLMEDNFVACS-LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
            +   G  + A  LF  M  S  QPD  T+  +L      G     L  L  MQ+L
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTL 748


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Cucumis sativus]
          Length = 990

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 262/811 (32%), Positives = 404/811 (49%), Gaps = 71/811 (8%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            ++K CT      LG  VH   +K G   D+ +  A++  YGKC  ++ A +LF ++ + +
Sbjct: 216  LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPE-Q 274

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS--RTIVKMLQACAKVGAFHEGKQ 417
            + + WN +I     N  W  A + FR +  S    I    T+V +L  C+  G    G  
Sbjct: 275  NLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMV 334

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            IHG  +K  L   L VCN LI M                               Y+  G 
Sbjct: 335  IHGMAVKLGLVHELMVCNALIDM-------------------------------YSKCGC 363

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSV 535
            +  A  LF K+ +      +++WN ++  +   G       LLR M  +      N  ++
Sbjct: 364  LSEAAILFRKIENK----SVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTI 419

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              +L A  E   L   R  HGY LR+   Y   +  + +  Y K   L  A+ VF  M  
Sbjct: 420  LNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT 479

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSK 650
            +++ +WN++I G+   G  + A     +M    I PD  S  SL+      G   +G+  
Sbjct: 480  KSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI 539

Query: 651  EALVIIHHMKNSGIYP--------------------------NVVTWTSLISGSLQNENY 684
               V+ + ++ +                              N V W +++SG  QNE  
Sbjct: 540  HGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELP 599

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L  F QM  + ++P+   ++S+L  C  L  L  GKE+HC  LKN  ++D +VA  L
Sbjct: 600  NEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSL 659

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMY+KSG L  ++ +F +   K +ASWN MI GF ++G G +A+ LF ++  +  QPD 
Sbjct: 660  MDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDR 719

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
             TF  +L AC ++GLV EG  Y   M T Y + P +EHY+C++D+LG+AG L+EA +FI 
Sbjct: 720  FTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFIN 779

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP +PDA IW +LL S   +  LE  E  + +L  LE   + +Y L+ NL A + +W+ 
Sbjct: 780  EMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDV 839

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V  +R  M ++ ++  +  SWI++   V+ F A    +P++ EI      L  ++ ++GY
Sbjct: 840  VRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGY 899

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PD  CV  +++E EK K+L  H+EK+AI +G + TK    +R+ KN R+C DCH AAKY
Sbjct: 900  TPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKY 959

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S    REI +RD  RFHHF++G CSC D W
Sbjct: 960  ISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 287/651 (44%), Gaps = 73/651 (11%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL-IKRGFDFDVHL 331
           G +  L   W    G  +  R   + ++L+ C +     +G ++   L +   F  D  L
Sbjct: 86  GALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVL 145

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREM-QF 389
              L+  Y  C     +  +F  +  L  +L  WN ++   +RNE ++ AI  F E+   
Sbjct: 146 NTRLITMYSICGYPLESRLVFDRL--LNKNLFQWNALVSGYVRNELYDEAIHTFLELISV 203

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           +  +  + T   +++AC      H GK +HG  +K  L  +L V N +I++Y +   L+ 
Sbjct: 204 TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDE 263

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  +FD M + NL SWNS+I  ++  G+   A+  F  +              L SG   
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSL--------------LESGD-- 307

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                            G  P+ +++  +L   +    +  G   HG  ++ GL ++L V
Sbjct: 308 -----------------GLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMV 350

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE- 628
             +L+DMY K  CL  A  +F  ++N+++V+WNS+I  Y  +G       +L +M  EE 
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410

Query: 629 -----------IKPDLVSWNSLVS-----GYSIWG--QSKE--------------ALVII 656
                      + P  +  + L+S     GYS+    Q KE              +LV  
Sbjct: 411 LMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFA 470

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            H+       +V +W ++I G  QN +  ++L F+ +M +  I P+  ++ SLL  CG L
Sbjct: 471 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRL 530

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
           GLLQ GKEIH   L+NG   +++VA  L+ +Y         R  F +  +K    WN M+
Sbjct: 531 GLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAML 590

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
            G++      EA+ LF ++L  G +PD I   ++L AC     +  G K     +   ++
Sbjct: 591 SGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG-KEVHCFALKNSL 649

Query: 837 IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           +        ++D+  K+G+L  +      +  K  A+ W  ++    +HG 
Sbjct: 650 MEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS-WNVMITGFGVHGQ 699



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 231/558 (41%), Gaps = 95/558 (17%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF----- 264
           KS H   +KMG I   D  V  ++I  Y + G    A + F     ++   W+S      
Sbjct: 230 KSVHGMAVKMGLIM--DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFS 287

Query: 265 -----LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHAS 319
                LE Y +F    + LLE      G G+I     +  +L +C+      +G+ +H  
Sbjct: 288 ENGFWLEAYRAF----RSLLE-----SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGM 338

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            +K G   ++ +  AL++ Y KC  +  A  LF ++ + +  + WN +I    R      
Sbjct: 339 AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN-KSVVSWNSMIGAYSREGFVFE 397

Query: 380 AIKLFREMQFSSA--KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
              L R+M       +    TI+ +L AC +       + +HGY L+ + +    + N  
Sbjct: 398 TFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAF 457

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           I+ Y++   L  A  VF  M   ++SSWN++I                            
Sbjct: 458 IAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVI---------------------------- 489

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                   GH  +G     L     M  LG  P+  S+  +L A   L LL+YG+E HG+
Sbjct: 490 -------GGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGF 542

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           +LRNGL+ + +V  SL+ +Y         +  F+ M ++N V WN+++SGY    L   A
Sbjct: 543 VLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEA 602

Query: 618 KKMLNQMEEEEIKPDLVSWNSLV---SGYSIWGQSKEALVIIHHMKNSGIYPN------- 667
             +  QM  + ++PD ++  S++   S  S  G  KE  V    +KNS +  N       
Sbjct: 603 LSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKE--VHCFALKNSLMEDNFVACSLM 660

Query: 668 -----------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                  V +W  +I+G   +    ++++ F  M++ D +P+  
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720

Query: 705 TMSSLLQTCGGLGLLQNG 722
           T   +LQ C   GL+  G
Sbjct: 721 TFLGVLQACCHAGLVSEG 738



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 171/382 (44%), Gaps = 33/382 (8%)

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           D V    L++ YSI G   E+ ++   + N     N+  W +L+SG ++NE Y E++  F
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNK----NLFQWNALVSGYVRNELYDEAIHTF 197

Query: 692 IQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
           +++    + +P++ T   L++ C G   +  GK +H + +K G I D +V   +I +Y K
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGK 257

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET--GFQPDAITFT 808
            G L  A E+F K   + L SWN +I GF+  G   EA   F  LLE+  G  PD  T  
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMV 317

Query: 809 ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            LL  C   G V+ G      M+    ++  +   + ++D+  K G L EA    R +  
Sbjct: 318 TLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN 376

Query: 869 KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA--------MSN 920
           K   + W +++G+    G +       R+++  E     N   ++NLL         +S 
Sbjct: 377 KSVVS-WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSL 435

Query: 921 RWEDVERLRHSMD-EVGVKSVLVWSWIQIDQIV---HVF-----------SAEGAPHPAT 965
           R      LRHS   +  + +  + ++ +   +V   HVF           +A    H   
Sbjct: 436 RALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQN 495

Query: 966 GEIYFELYHLVSEMKKLGYVPD 987
           G+    L     EM +LG +PD
Sbjct: 496 GDPIKAL-DFYFEMTRLGILPD 516



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 140/296 (47%), Gaps = 4/296 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           + I  Y + G    A   FF   ++S + W++ +  +   G  ++ L + + E+   G++
Sbjct: 456 AFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKAL-DFYFEMTRLGIL 514

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C +L     G E+H  +++ G + +  +  +L++ Y  C         
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTY 574

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + D ++ + WN ++    +NE    A+ LFR+M     +     I  +L AC+++ A
Sbjct: 575 FERMGD-KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA 633

Query: 412 FHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
              GK++H + LK++L E N   C+ L+ MY+++  L  + R+F+ +    ++SWN MI+
Sbjct: 634 LGLGKEVHCFALKNSLMEDNFVACS-LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
            +   G  + A  LF  M  S  QPD  T+  +L      G     L  L  MQ+L
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTL 748


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 666

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/700 (32%), Positives = 375/700 (53%), Gaps = 54/700 (7%)

Query: 384  FREMQFSSAKAI------SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            F+ + FS+ K I       +T++K+  +   + +     Q+H  VL+S    +  V   L
Sbjct: 13   FKPVDFSAEKNIPTSKLPQKTVLKLFDS-KSITSLQYLTQLHALVLRSGHFQDHYVSGAL 71

Query: 438  ISMYSRNN--KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            +  Y+  +    + A +VF S+ + N+  WN                             
Sbjct: 72   LKCYANPHFSNFDFALKVFSSIPNPNVFIWN----------------------------- 102

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
             I+   CL +       Y        G   +  RPN  +   + +A +  + ++ GR+ H
Sbjct: 103  -IVIKGCLENNKLFKAIY------FYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIH 155

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            G+++++G+  D+++ ++ + MY     L++A+++F + ++ ++V WN++I GY   G+  
Sbjct: 156  GHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGES-DVVCWNTMIDGYLKCGVLE 214

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
             AK +  QM  + I     SWN +++G +  G   +A  +   M       + ++W+S++
Sbjct: 215  AAKGLFAQMPVKNIG----SWNVMINGLAKGGNLGDARKLFDEMSER----DEISWSSMV 266

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
             G +    Y+E+L+ F QMQ+E+ +P    +SS+L  C  +G +  G+ +H    +N   
Sbjct: 267  DGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIK 326

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             DA + T L+DMY+K G L    EVF +   + + +WN MI G AI+G  ++A+ LF +L
Sbjct: 327  LDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKL 386

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
             E   +P+ IT   +L AC ++G V++G + F +M   Y + P +EHY CMVDLLG++G 
Sbjct: 387  QEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGL 446

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
              EA D I +MP KP+A +WGALLG+CRIHG+ + AE   + L +LEP NS  Y L+ N+
Sbjct: 447  FSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNI 506

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A   R++DV ++R  M   G+K+V   S + ++  VH F      HP   EIY +L  +
Sbjct: 507  YAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKII 566

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
               ++  G+ PDT  V  DIDEEEK   +  H+EKLAI +GL+ T     I ++KN RVC
Sbjct: 567  KERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVC 626

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH+A K +S +  REI +RD  R+HHF+ G CSC D W
Sbjct: 627  DDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 204/430 (47%), Gaps = 36/430 (8%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCR--DVESANKLFSEVSDLEDDLLWNEIIMVK 371
            ++HA +++ G   D ++  AL+  Y      + + A K+FS + +  +  +WN +I   
Sbjct: 50  TQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPN-PNVFIWNIVIKGC 108

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           L N K   AI  +  M    A+    T   + +AC+   A  EG+QIHG+V+K  + S++
Sbjct: 109 LENNKLFKAIYFYGRMVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDV 167

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            + +  I MY+   +LE A ++F S  + ++  WN+MI  Y   G ++ A  LF +M   
Sbjct: 168 HIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVK 226

Query: 492 RI---------------------------QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
            I                           + D I+W+ ++ G+ + G Y+  L + + MQ
Sbjct: 227 NIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQ 286

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
               RP    +S VL A + +  +  GR  H Y+ RN +  D  +GT+L+DMY K   L 
Sbjct: 287 REETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLD 346

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
              EVF+ MK R I  WN++I G    G   +A ++ ++++E  +KP+ ++   +++  +
Sbjct: 347 MGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACA 406

Query: 645 IWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             G   + L I   M+   G+ P +  +  ++    ++  + E+      M    +KPN+
Sbjct: 407 HAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP---MKPNA 463

Query: 704 TTMSSLLQTC 713
               +LL  C
Sbjct: 464 AVWGALLGAC 473



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 159/332 (47%), Gaps = 39/332 (11%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           ++N   K  ++  A KLF E+S+  D++ W+ ++   +   +++ A+++F++MQ    + 
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSE-RDEISWSSMVDGYISAGRYKEALEIFQQMQREETRP 292

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               +  +L AC+ +GA  +G+ +H Y+ +++++ +  +   L+ MY++  +L++   VF
Sbjct: 293 GRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVF 352

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           + MK+  + +WN+MI      G  + A  LF+K+   R++P+ IT               
Sbjct: 353 EEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT--------------- 397

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
            ++ +L      GF   G            LR+ +  RE +      G+D +L     ++
Sbjct: 398 -LVGVLTACAHAGFVDKG------------LRIFQTMREFY------GVDPELEHYGCMV 438

Query: 575 DMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           D+  ++     A+++ ++M  + N   W +L+      G F  A+++   +   E++P  
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL--LELEPQN 496

Query: 634 VSWNSLVSG-YSIWGQSKEALVIIHHMKNSGI 664
                L+S  Y+  G+  +   I   MKN GI
Sbjct: 497 SGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGI 528



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 11/278 (3%)

Query: 207 LSSVKSKHAQM-IKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L + K   AQM +K    WN   M+  L     + G+   A K F     R    WSS +
Sbjct: 213 LEAAKGLFAQMPVKNIGSWNV--MINGLA----KGGNLGDARKLFDEMSERDEISWSSMV 266

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
           + Y S  G  +E LE++ ++  +       IL+ +L  C+ + A   G  VHA L +   
Sbjct: 267 DGYIS-AGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSI 325

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
             D  L  AL++ Y KC  ++   ++F E+ + E    WN +I     + + E+A++LF 
Sbjct: 326 KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE-IFTWNAMIGGLAIHGRAEDALELFS 384

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRN 444
           ++Q    K    T+V +L ACA  G   +G +I   + +   ++  L    C++ +  R+
Sbjct: 385 KLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRS 444

Query: 445 NKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
                A  + +SM    N + W +++ +    G  D+A
Sbjct: 445 GLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLA 482


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/779 (31%), Positives = 388/779 (49%), Gaps = 84/779 (10%)

Query: 338  FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
             YGKC  V  A  +F  + +  + + W  I+    RN  +  A+  +R M     +    
Sbjct: 1    MYGKCGSVADALAVFHAI-EHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59

Query: 398  TIVKMLQACAKVGAFHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDS 456
              V  +  C+      +G+ +H  +L++ L E ++ +   LI+MY+R   LELA + FD 
Sbjct: 60   MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M    L                                   +TWN L++G+  +G ++  
Sbjct: 120  MGKKTL-----------------------------------VTWNALIAGYSRNGDHRGA 144

Query: 517  LTLLRGMQSL---GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            L + + M S    G +P+  + S  L A T +  +  GRE     + +G   D  V  +L
Sbjct: 145  LKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNAL 204

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP-- 631
            ++MY K   L++A++VFD +KNR+++AWN++ISGY  +G    A ++  +M   + KP  
Sbjct: 205  INMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNV 264

Query: 632  ---------------------------------DLVSWNSLVSGYSIWGQS-KEALVIIH 657
                                             DLV  N L++ Y+    S +EA  +  
Sbjct: 265  VTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFE 324

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
             M+      +V+TW  LI   +Q    +++L  F QMQ E++ PN  T+S++L  C  LG
Sbjct: 325  RMRTR----DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
              + GK +H L        D  +   L++MY++ G+L     VF    +K+L SW+ +I 
Sbjct: 381  AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIA 440

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
             +A +G+ +  +  F ELL+ G   D +T  + L+AC + G+++EG + F SM  D+ + 
Sbjct: 441  AYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLA 500

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P   H+ CMVDLL +AG L+ A + I  MPF PDA  W +LL  C++H   + A   + +
Sbjct: 501  PDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADK 560

Query: 898  LFKLEPCNS-ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            LF+LE  +  +   L+ N+ A + RW+DV + R   +    +     S+I+I+  VH F 
Sbjct: 561  LFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFV 617

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            A    HP    I  E+  L  +MK  GYVPD R V  ++ EEEK ++L  H+EKLAI YG
Sbjct: 618  AGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYG 677

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+ T    P+ ++KN R C DCH AAK++S + GR+I +RD  RFHHF  G CSC D W
Sbjct: 678  LISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736



 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 150/611 (24%), Positives = 279/611 (45%), Gaps = 76/611 (12%)

Query: 240 FGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELLEVWGELHGKGVIFRSRIL 297
           +G   S A A  ++ +  + +  S+     +F   G  +E L  +  +  +G+     + 
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 298 TIILKLCTKLMAFWLGVEVHASLIK-RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            + + +C+       G  +HA +++ R  +FD+ L  AL+  Y +CRD+E A K F E+ 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI---SRTIVKMLQACAKVGAFH 413
             +  + WN +I    RN     A+K++++M   S + +   + T    L AC  VG   
Sbjct: 122 K-KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           +G++I    + S   S+  V N LI+MYS+   LE A +VFD +K+ ++ +WN+MIS Y 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G    A  LF +M  +  +P+++T+  LL+                            
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLT---------------------------- 272

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK-NDCLQNAQEVFDN 592
                  A T L  L+ GR  H  +  +G + DL +G  L++MY K +  L+ A++VF+ 
Sbjct: 273 -------ACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFER 325

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE- 651
           M+ R+++ WN LI  Y   G   +A  +  QM+ E + P+ ++ ++++S  ++ G  ++ 
Sbjct: 326 MRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385

Query: 652 ----ALVIIHHMKNSGIYPN--------------------------VVTWTSLISGSLQN 681
               AL+     K   +  N                          +V+W++LI+   Q+
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH-CLCLKNGFIKDAYV 740
            + R  L+ F ++ QE +  +  TM S L  C   G+L+ G +    +   +G   D   
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRH 505

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLA-SWNCMIMGFAIYGNGKEAILLFHELLETG 799
              ++D+ S++G L++A  +         A +W  ++ G  ++ + K A  +  +L E  
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELE 565

Query: 800 FQPDAITFTAL 810
            + +  T T L
Sbjct: 566 SEDEHSTVTLL 576



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 153/316 (48%), Gaps = 15/316 (4%)

Query: 224 WNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQ--ELLE 280
           + SD +V+ +LI  Y + G   SA K F    +R    W++ +  Y   G   Q  EL +
Sbjct: 194 YASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQ 253

Query: 281 VWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
             G    K       ++T I  L  CT L     G  +H  + + G++ D+ +   L+N 
Sbjct: 254 RMGPNDPK-----PNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNM 308

Query: 339 YGKCRD-VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
           Y KC   +E A ++F  +    D + WN +I+  ++  + ++A+ +F++MQ  +      
Sbjct: 309 YTKCSSSLEEARQVFERMR-TRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEI 367

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+  +L ACA +GA  +GK +H  +     ++++ + N L++MY+R   L+    VF ++
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY--QN 515
           +D +L SW+++I++Y   G+       F ++    +  D +T    LS   +HG    + 
Sbjct: 428 RDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA-CSHGGMLKEG 486

Query: 516 VLTLLRGMQSLGFRPN 531
           V T L  +   G  P+
Sbjct: 487 VQTFLSMVGDHGLAPD 502


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/553 (37%), Positives = 325/553 (58%), Gaps = 39/553 (7%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M   G +PN  ++S V++A   +  L+ G+++H YI++ G + D+ V T+L+ MY +   
Sbjct: 1    MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
            L++A  VFD M  R+                                     +WN++++G
Sbjct: 61   LEDAGHVFDKMSERSTR-----------------------------------TWNAMITG 85

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
            ++     K+AL + + M       +VV+WT++I+G  QN    ESL  F QM++  +K +
Sbjct: 86   HAQNRDMKKALKLFYEMSER----DVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSD 141

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
               M S+L  C  L  L+ G++ H   +++GF  D  V + L+DMY+KSG+++ A +VF 
Sbjct: 142  RFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFD 201

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            K   +   SWN +I G A +G G +A+LLF ++L+ G +P+ I+F  +L+AC ++GLV E
Sbjct: 202  KMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNE 261

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G  YF+ M+ +Y I+P + HY+CM+DLLG+AG LDEA +FI  MP +PD ++WGALLG+C
Sbjct: 262  GRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGAC 321

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIHG+ E A+  +  L  +E   +  Y L+ N+ A + +W+D  ++R  M + GV     
Sbjct: 322  RIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPG 381

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
            +SWI++  I+H F A    HP   EI+  L  L  +MK  GYVP+   V QD++++EK  
Sbjct: 382  YSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKEL 441

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLAI +G++ T     IRV KN RVC DCHT  K++SL   R+I +RD  RFH
Sbjct: 442  SLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFISLNFTRKIVVRDANRFH 501

Query: 1063 HFREGECSCNDCW 1075
            HF++G CSC D W
Sbjct: 502  HFKDGRCSCGDYW 514



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 194/366 (53%), Gaps = 13/366 (3%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+  +++ACA + +  +GKQ H Y++K   ES++ V   L+ MY+R   LE A  VFD M
Sbjct: 12  TLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKM 71

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            + +  +WN+MI+ +     +  A  LF +M+    + D+++W  +++G+  +G     L
Sbjct: 72  SERSTRTWNAMITGHAQNRDMKKALKLFYEMS----ERDVVSWTAVIAGYAQNGYGDESL 127

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
            +   M+  G + +   +  VL A  +L  L+ GR+ H Y++++G   D+ VG++L+DMY
Sbjct: 128 NVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMY 187

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            K+  +++A +VFD M  RN V+WNS+I+G    G   +A  +  QM +  IKP+ +S+ 
Sbjct: 188 AKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFV 247

Query: 638 SLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
            ++S  S  G   E     + M +N GI P+V  +T +I    +     E+  F   M  
Sbjct: 248 GVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMP- 306

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEI--HCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
             ++P+ +   +LL  C   G  +  K I  H L ++   ++ A +   L ++Y+ +G  
Sbjct: 307 --VEPDVSVWGALLGACRIHGNTELAKRIAEHLLGME---VQIAGIYVLLSNIYAAAGQW 361

Query: 755 KSAREV 760
             A +V
Sbjct: 362 DDAAKV 367



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 178/413 (43%), Gaps = 74/413 (17%)

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           GKGV      L+ ++K C  + +   G + H  +IK GF+ DV ++ AL++ Y +C  +E
Sbjct: 3   GKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLE 62

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV------ 400
            A  +F ++S+      WN +I    +N   + A+KLF EM  S    +S T V      
Sbjct: 63  DAGHVFDKMSE-RSTRTWNAMITGHAQNRDMKKALKLFYEM--SERDVVSWTAVIAGYAQ 119

Query: 401 ---------------------------KMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                                       +L ACA + A   G+Q H YV++S    ++ V
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            + L+ MY+++  +E A +VFD M   N  SWNS+I+     G  + A  LF +M  + I
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           +P+ I++                         +G          VL A +   L+  GR 
Sbjct: 240 KPNEISF-------------------------VG----------VLSACSHTGLVNEGRG 264

Query: 554 SHGYILRN-GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFK 611
               + +N G+  D+   T ++D+  +  CL  A+   + M    ++  W +L+      
Sbjct: 265 YFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIH 324

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           G    AK++   +   E++   + +  L + Y+  GQ  +A  +   MK+ G+
Sbjct: 325 GNTELAKRIAEHLLGMEVQIAGI-YVLLSNIYAAAGQWDDAAKVRKLMKDRGV 376



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 149/368 (40%), Gaps = 62/368 (16%)

Query: 163 KPNSITNSPTSLALPPTDTL--AKQAQLSCISSGFCFLNETNKF----------RCLSSV 210
           KPN  T S    A     +L   KQA    I  GF    E++            RC S  
Sbjct: 7   KPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGF----ESDVVVQTALVHMYARCGSLE 62

Query: 211 KSKHAQMIKMG----KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
            + H    KM     + WN+      +I  + +  D   A K F+    R    W++ + 
Sbjct: 63  DAGHV-FDKMSERSTRTWNA------MITGHAQNRDMKKALKLFYEMSERDVVSWTAVIA 115

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y    G   E L V+ ++   G+     I+  +L  C  L A  LG + HA +++ GF 
Sbjct: 116 GYAQ-NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFA 174

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D+ +  AL++ Y K   +E A ++F ++    +++ WN II    ++ +  +A+ LF +
Sbjct: 175 LDIVVGSALVDMYAKSGSMEDACQVFDKMPQ-RNEVSWNSIITGCAQHGRGNDAVLLFEQ 233

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M  +  K    + V +L AC+  G  +EG+   GY                         
Sbjct: 234 MLQAGIKPNEISFVGVLSACSHTGLVNEGR---GY------------------------- 265

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             L T+ +  + D  +S +  MI      G +D A +  N M    ++PD+  W  LL  
Sbjct: 266 FNLMTQNYGIVPD--VSHYTCMIDLLGRAGCLDEAENFINGM---PVEPDVSVWGALLGA 320

Query: 507 HFTHGSYQ 514
              HG+ +
Sbjct: 321 CRIHGNTE 328


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
            protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  424 bits (1091), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/722 (31%), Positives = 379/722 (52%), Gaps = 68/722 (9%)

Query: 418  IHGYVLKSALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H  +LK+ L++  + + N L++ Y+++ +L  A RVFD M D NL + N+++S+     
Sbjct: 34   VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSV 535
             V     LF  M     + D +++N L++G  + GS    + L R + +    RP   ++
Sbjct: 94   LVPDMERLFASMP----ERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITL 149

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            S ++   + L     G   H  +LR G     +VG+ L+DMY K   +++A+ VF  M+ 
Sbjct: 150  SAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEA 209

Query: 596  RNIVAWNSLISGYC-------FKGLF------------------------VNAKKMLNQM 624
            + +V +N+LI+G          KGLF                        + A  +  +M
Sbjct: 210  KTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM 269

Query: 625  EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-------------GIYP----- 666
              E +  D  ++ S+++        +E   I  ++  +              +Y      
Sbjct: 270  RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSI 329

Query: 667  -------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                         N+++WT++I G  QN    E+++ F +MQ + IKP+  T+ S++ +C
Sbjct: 330  RLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC 389

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              L  L+ G + HCL L +G ++   V+  L+ +Y K G+++ A  +F + +     SW 
Sbjct: 390  ANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 449

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             ++ G+A +G  KE I LF ++L  G +PD +TF  +L+AC  +GLVE+G  YFDSM  D
Sbjct: 450  ALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKD 509

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            + I+P  +HY+CM+DL  ++G   EA +FI+ MP  PDA  W  LL SCR+ G++E  + 
Sbjct: 510  HGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKW 569

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A+  L + +P N A+Y L+ ++ A   +W +V  LR  M +  VK     SWI+    VH
Sbjct: 570  AAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVH 629

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
            +FSA+   HP +  IY +L  L S+M + GY PD   V  D+ + +K  ++  H+EKLAI
Sbjct: 630  IFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAI 689

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +GL+      PIR++KN RVC DCH A K++S + GR+I +RD  RFH F +G CSC D
Sbjct: 690  AFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGD 749

Query: 1074 CW 1075
             W
Sbjct: 750  FW 751



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 232/515 (45%), Gaps = 43/515 (8%)

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           D ++  + AL++     R V    +LF+ + +  D + +N +I           +++L+R
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPE-RDAVSYNALITGFSSTGSPARSVQLYR 134

Query: 386 EM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            + +  S +    T+  M+   + +     G  +H  VL+    +   V + L+ MY++ 
Sbjct: 135 ALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKM 194

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +  A RVF  M+   +  +N++I+       ++ A  LF  M    +  D ITW  ++
Sbjct: 195 GLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLM----VDRDSITWTTMV 250

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           +G   +G     L + R M++ G   +  +   +L A   L  L+ G++ H YI R   +
Sbjct: 251 TGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYE 310

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            +++VG++L+DMY K   ++ A+ VF  M  RNI++W ++I GY        A +  ++M
Sbjct: 311 DNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM 370

Query: 625 EEEEIKPDLVSWNS---------------------LVSGYSIWGQSKEALVII------- 656
           + + IKPD  +  S                     LVSG   +     ALV +       
Sbjct: 371 QMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSI 430

Query: 657 ---HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
              H + +   + + V+WT+L++G  Q    +E++  F +M    +KP+  T   +L  C
Sbjct: 431 EDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC 490

Query: 714 GGLGLLQNGKE-IHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              GL++ G +    +   +G   I D Y  T +ID+YS+SG  K A E  ++  +   A
Sbjct: 491 SRAGLVEKGCDYFDSMQKDHGIVPIDDHY--TCMIDLYSRSGRFKEAEEFIKQMPHSPDA 548

Query: 771 -SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
             W  ++    + GN +        LLET  Q  A
Sbjct: 549 FGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPA 583



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 211/501 (42%), Gaps = 73/501 (14%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGV 314
           R    +++ +  + S G   + + +++  L  +  +  +RI L+ ++ + + L    LG 
Sbjct: 108 RDAVSYNALITGFSSTGSPARSV-QLYRALLREESVRPTRITLSAMIMVASALSDRALGH 166

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGK-------------------------------CR 343
            VH  +++ GF     +   L++ Y K                               C+
Sbjct: 167 SVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCK 226

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            +E A  LF  + D  D + W  ++    +N     A+ +FR M+         T   +L
Sbjct: 227 MIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            AC  + A  EGKQIH Y+ ++  E N+ V + L+ MYS+   + LA  VF  M   N+ 
Sbjct: 286 TACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           SW +MI  Y      + A   F++M    I+PD           FT GS           
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPD----------DFTLGS----------- 384

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                         V+ +   L  L+ G + H   L +GL   + V  +L+ +Y K   +
Sbjct: 385 --------------VISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSI 430

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
           ++A  +FD M   + V+W +L++GY   G       +  +M    +KPD V++  ++S  
Sbjct: 431 EDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC 490

Query: 644 SIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           S  G  ++       M K+ GI P    +T +I    ++  ++E+ +F  QM      P+
Sbjct: 491 SRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPH---SPD 547

Query: 703 STTMSSLLQTCGGLGLLQNGK 723
           +   ++LL +C   G ++ GK
Sbjct: 548 AFGWATLLSSCRLRGNMEIGK 568



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 187/438 (42%), Gaps = 40/438 (9%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           M  +LI   L       A   F L   R    W++ +      G ++ E L+V+  +  +
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQL-EALDVFRRMRAE 272

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           GV         IL  C  L A   G ++HA + +  ++ +V +  AL++ Y KCR +  A
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F  ++   + + W  +I+   +N   E A++ F EMQ    K    T+  ++ +CA 
Sbjct: 333 EAVFRRMT-CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + +  EG Q H   L S L   ++V N L+++Y +   +E A R+FD M  H+  SW ++
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           ++ Y   G       LF KM ++ ++PD +T+  +LS     G  +        MQ    
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQ---- 507

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
                                   + HG +  +    D Y  T ++D+Y ++   + A+E
Sbjct: 508 ------------------------KDHGIVPID----DHY--TCMIDLYSRSGRFKEAEE 537

Query: 589 VFDNMKNR-NIVAWNSLISGYCFKG-LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
               M +  +   W +L+S    +G + +      N +E +   P   S+  L S ++  
Sbjct: 538 FIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNP--ASYVLLCSMHAAK 595

Query: 647 GQSKEALVIIHHMKNSGI 664
           GQ  E   +   M++  +
Sbjct: 596 GQWTEVAHLRRGMRDRQV 613


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 289/951 (30%), Positives = 467/951 (49%), Gaps = 94/951 (9%)

Query: 211  KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
            K  HA+++  G + +   +  +LI  Y + G   SA + F     R    W+S L  Y  
Sbjct: 631  KRAHARIVTSGDLPDRY-LTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689

Query: 271  FGGE----VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE--VHASLIKRG 324
            F       V E   ++G L   G  F    LT+   L   L++ ++ V   VH   +K G
Sbjct: 690  FADSSYENVLEGFRLFGLLREFG--FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIG 747

Query: 325  FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            F+ D+ +  AL+N Y K   V  A  LF ++ +  D +LWN ++   + N   + A++ F
Sbjct: 748  FELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLWNVMLKAYVENSFQDEALRFF 806

Query: 385  REMQ-------FSSAKAI------------SRTIVKMLQACAKVGAFHEGKQIHGY---- 421
                       FS+   +             R   ++     K+  F +G  I  +    
Sbjct: 807  SAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKL 866

Query: 422  ------------------VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
                              +L+S +  +      ++S     + L+L  ++   +   + +
Sbjct: 867  TEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFA 926

Query: 464  SW----NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
                  NS+++ Y+  G V  A   F  +NS  +  D+I+WN ++S +  +      +  
Sbjct: 927  PVVPVSNSLMNMYSKAGVVYAAEKTF--INSPEL--DLISWNTMISSYAQNNLEMEAICT 982

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVT---ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
             R +   G +P+  +++ VL+A +   E      G + H Y ++ G+  D +V T+L+D+
Sbjct: 983  FRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL 1042

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
            Y K   +  A+ +     + ++ +WN+++ GY        A +  + M E  I  D ++ 
Sbjct: 1043 YSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITL 1102

Query: 637  NSLV--SGYSI---WGQSKEALVIIHHMKN-----SGIY--------------------- 665
             + +  SG  I    G+  +A  I     N     SG+                      
Sbjct: 1103 ATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISR 1162

Query: 666  PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            P+ V WT++ISG ++N +   +L  +  M+   ++P+  T ++L++    L  L+ GK+I
Sbjct: 1163 PDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQI 1222

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            H   +K  +  D +V T L+DMY K G+++ A  VFRK   + +  WN M++G A +G+ 
Sbjct: 1223 HANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHV 1282

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
             EA+ LF  +   G QPD +TF  +L+AC +SGL  E +KYFD+M   Y I P IEHYSC
Sbjct: 1283 DEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSC 1342

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            +VD LG+AG + EA + I +MPFK  A+++ ALLG+CR  G  E A+  + +L  L+P +
Sbjct: 1343 LVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSD 1402

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            S+ Y L+ N+ A S +W+DV   R+ M    VK    +SWI +   VH+F  +   HP  
Sbjct: 1403 SSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQA 1462

Query: 966  GEIYFELYHLVSEMKKLG-YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
              IY ++  L+  +++ G YVPDT     D++EEEK + L  H+EKLAI +GL+ T   A
Sbjct: 1463 SLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSA 1522

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             IRVIKN RVC DCH+A K +S +  REI LRD  RFHHFR G CSC D W
Sbjct: 1523 TIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  189 bits (479), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 164/678 (24%), Positives = 298/678 (43%), Gaps = 119/678 (17%)

Query: 312  LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV- 370
            LG   HA ++  G   D +L   L+  Y KC  + SA ++F + SD  D + WN I+   
Sbjct: 629  LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSD-RDLVTWNSILAAY 687

Query: 371  -KLRNEKWENAIK------LFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYV 422
             +  +  +EN ++      L RE  FS    I+R T+  +L+ C   G     + +HGY 
Sbjct: 688  AQFADSSYENVLEGFRLFGLLREFGFS----ITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
            +K   E +L V   L+++Y +   +  A  +FD M + +   WN M+ +Y    + D A 
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 483  SLFNKMNSSRIQPDIITWNCLLSG------------------------HFTHGSYQNVL- 517
              F+  + S   PD    +C++ G                         F  GS  N+  
Sbjct: 804  RFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS--NIFA 861

Query: 518  ----------------------TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                                  TLLR   ++G   +  ++ ++L A      L  G + H
Sbjct: 862  WNKKLTEFLHAGQIVAAIDCFKTLLR--STIGH--DSVTLVIILSAAVGADDLDLGEQIH 917

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
              ++++     + V  SLM+MY K   +  A++ F N    ++++WN++IS Y    L +
Sbjct: 918  ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977

Query: 616  NAKKMLNQMEEEEIKPDLVSWNS------------------------------------- 638
             A      +  + +KPD  +  S                                     
Sbjct: 978  EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 639  -LVSGYSIWGQSKEALVIIHHMKNSGIYP-NVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             L+  YS  G+  EA  ++H     G Y  ++ +W +++ G +++   R++L+ F  M +
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLH-----GKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
              I  +  T+++ ++  G L  L+ GK+I    +K GF  D +V++G++DMY K G++ +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A E+F + +     +W  MI G+   G+   A+ ++H +  +G QPD  TF  L+ A   
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 817  SGLVEEGWK-YFDSMSTDYNIIPTIEHY--SCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
               +E+G + + + +  DY    +++H+  + +VD+  K G + +A+   R M  +    
Sbjct: 1213 LTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VV 1267

Query: 874  IWGALLGSCRIHGHLEYA 891
             W A+L     HGH++ A
Sbjct: 1268 FWNAMLLGLAQHGHVDEA 1285



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L+ GK  H   + +G + D Y+   LI MYSK G+L SAR+VF KS+++ L +WN ++  
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 779 FA-----IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE-----EGWKYFD 828
           +A      Y N  E   LF  L E GF    +T   LL  C  SG V+      G+    
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746

Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
               D  +   + +  C   L+G+A  L         MP + DA +W  +L
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLL------FDKMPER-DAVLWNVML 790



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 78/375 (20%), Positives = 148/375 (39%), Gaps = 73/375 (19%)

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           LK G+ +H  I+ +G   D Y+  +L+ MY K   L +A++VFD   +R++V WNS+++ 
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 608 YC-------------FK--GL------------------------FVNAKKMLNQMEEE- 627
           Y              F+  GL                        FV   + ++    + 
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
             + DL    +LV+ Y  +G   +A ++   M       + V W  ++   ++N    E+
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER----DAVLWNVMLKAYVENSFQDEA 802

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL-LQNGKEIHCLCLKNGFIKDAYVATGLID 746
           L+FF    +    P+    S+L    GG+   + N ++ H   +K      AY       
Sbjct: 803 LRFFSAFHRSGFFPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK------AY------- 846

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
                     A ++F       + +WN  +  F   G    AI  F  LL +    D++T
Sbjct: 847 ----------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896

Query: 807 FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
              +L+A   +  ++ G +   ++    +  P +   + ++++  KAG +  A       
Sbjct: 897 LVIILSAAVGADDLDLG-EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 867 PFKPDATIWGALLGS 881
           P + D   W  ++ S
Sbjct: 956 P-ELDLISWNTMISS 969


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
            At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 258/855 (30%), Positives = 420/855 (49%), Gaps = 112/855 (13%)

Query: 293  RSRILTIILKLCTKLMAFWLGVE-VHASLIKRGFDFDV--------------HLKCA--- 334
            RSR L  + +L     A +L    V A +IK GFD D                +  A   
Sbjct: 11   RSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKV 70

Query: 335  --------------LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
                          +++ + K  DV SA  LF  + D    + W  ++    RN  ++ A
Sbjct: 71   YDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPD-RTVVTWTILMGWYARNSHFDEA 129

Query: 381  IKLFREMQFSSAKAISR--TIVKMLQACAKVGAFHEGKQIHGYVLKSALESN--LSVCNC 436
             KLFR+M  SS+  +    T   +L  C      +   Q+H + +K   ++N  L+V N 
Sbjct: 130  FKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNV 189

Query: 437  LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
            L+  Y    +L+LA  +F+ +                                    + D
Sbjct: 190  LLKSYCEVRRLDLACVLFEEIP-----------------------------------EKD 214

Query: 497  IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
             +T+N L++G+   G Y   + L   M+  G +P+  + S VL+AV  L     G++ H 
Sbjct: 215  SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274

Query: 557  YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
              +  G   D  VG  ++D Y K+D +   + +FD M   + V++N +IS Y     +  
Sbjct: 275  LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334

Query: 617  AKKMLNQME-------------EEEIKPDLVSW----------------------NSLVS 641
            +     +M+                I  +L S                       NSLV 
Sbjct: 335  SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             Y+     +EA +I   +         V+WT+LISG +Q   +   LK F +M+  +++ 
Sbjct: 395  MYAKCEMFEEAELIFKSLPQR----TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRA 450

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            + +T +++L+       L  GK++H   +++G +++ +  +GL+DMY+K G++K A +VF
Sbjct: 451  DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             +  ++   SWN +I   A  G+G+ AI  F +++E+G QPD+++   +L AC + G VE
Sbjct: 511  EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G +YF +MS  Y I P  +HY+CM+DLLG+ G   EA   +  MPF+PD  +W ++L +
Sbjct: 571  QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630

Query: 882  CRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
            CRIH +   AE A+ +LF +E   ++A Y  M N+ A +  WE V  ++ +M E G+K V
Sbjct: 631  CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
              +SW++++  +HVFS+    HP   EI  ++  L +E+++ GY PDT  V QD+DE+ K
Sbjct: 691  PAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMK 750

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
             + L  H+E+LA+ + L+ T    PI V+KN R C DCH A K +S +  REI +RD +R
Sbjct: 751  IESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSR 810

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF EG CSC D W
Sbjct: 811  FHHFSEGVCSCGDYW 825



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 148/677 (21%), Positives = 274/677 (40%), Gaps = 120/677 (17%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL--HGKG 289
           ++I  +++ GD +SA   F     R+   W+  L  + +      E  +++ ++      
Sbjct: 84  TMISGHVKTGDVSSARDLFDAMPDRTVVTWT-ILMGWYARNSHFDEAFKLFRQMCRSSSC 142

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA--LMNFYGKCRDVES 347
            +      T +L  C   +      +VHA  +K GFD +  L  +  L+  Y + R ++ 
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  LF E+ + +D + +N +I    ++  +  +I LF +M+ S  +    T   +L+A  
Sbjct: 203 ACVLFEEIPE-KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +  F  G+Q+H   + +    + SV N ++  YS+++++ L TR+              
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRV-LETRM-------------- 306

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
                           LF++M     + D +++N ++S +     Y+  L   R MQ +G
Sbjct: 307 ----------------LFDEMP----ELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
           F       + +L     L  L+ GR+ H   L    D  L+VG SL+DMY K +  + A+
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--------------- 632
            +F ++  R  V+W +LISGY  KGL     K+  +M    ++ D               
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466

Query: 633 --------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                               + S + LV  Y+  G  K+A+ +   M +     N V+W 
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR----NAVSWN 522

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           +LIS    N +   ++  F +M +  ++P+S ++  +L  C   G ++ G E        
Sbjct: 523 ALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY------- 575

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
                                 ++   ++  +  K    + CM+      G   EA  L 
Sbjct: 576 ---------------------FQAMSPIYGITPKKK--HYACMLDLLGRNGRFAEAEKLM 612

Query: 793 HELLETGFQPDAITFTALLAAC---KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
            E+    F+PD I ++++L AC   KN  L E   +   SM      +     Y  M ++
Sbjct: 613 DEM---PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK----LRDAAAYVSMSNI 665

Query: 850 LGKAGYLDEAWDFIRTM 866
              AG  ++  D  + M
Sbjct: 666 YAAAGEWEKVRDVKKAM 682


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis pumila]
          Length = 710

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/672 (35%), Positives = 360/672 (53%), Gaps = 79/672 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F+ +     +P ++ WN +  GH       + L L   M SLG  PN
Sbjct: 50   FDGLPY---AISVFDTIQ----EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPN 102

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L++  +    K G++ HG +L+ G D DLY+ TSL+ MYV+N  L++AQ+V D
Sbjct: 103  SYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXD 162

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ---------------------------- 623
               +R++V++ +LI+GY  +G   +A KM ++                            
Sbjct: 163  KSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALEL 222

Query: 624  ---MEEEEIKPD----------------------LVSW-------------NSLVSGYSI 645
               M +  ++PD                      + SW             N+L+  YS 
Sbjct: 223  FKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSK 282

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   + N     +V++W +LI G      Y+E+L  F  M +   KPN  T
Sbjct: 283  CGELETACGLFQGLSNK----DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVT 338

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            M S+L  C  LG +  G+ IH    K   G    + + T LIDMY+K G++++A++VF  
Sbjct: 339  MLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDS 398

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              N++L+SWN MI GFA++G    A  +F  + + G +PD ITF  LL+AC +SG+++ G
Sbjct: 399  MLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 458

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F SM+ DY ++P +EHY CM+DL G +G   EA   I TM  +PD  IW +LL +C+
Sbjct: 459  RHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACK 518

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG++E  E  ++ L K+EP N  +Y L+ N+ A + RW +V + R  +++ G+K V   
Sbjct: 519  MHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGC 578

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I+ID +VH F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K   
Sbjct: 579  SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 638

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RFHH
Sbjct: 639  LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 698

Query: 1064 FREGECSCNDCW 1075
            FR+GECSCND W
Sbjct: 699  FRDGECSCNDYW 710



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 137/556 (24%), Positives = 249/556 (44%), Gaps = 78/556 (14%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYL---EFGDFTSAAKAFFLYFSRSYADW 261
           + L S++  HAQMIK G + N++  +  L+   +    F     A   F          W
Sbjct: 13  KTLQSLRIIHAQMIKTG-LHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIW 71

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           ++    + +   +    L+++  +   G++  S     +LK C K  AF  G ++H  ++
Sbjct: 72  NTMFRGH-ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVL 130

Query: 322 KRGFDFDVHLKCALMNFY---GKCRD----------------------------VESANK 350
           K GFD D+++  +L++ Y   G+  D                            +ESA+K
Sbjct: 131 KFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHK 190

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F E+  ++D + WN  I        ++ A++LF++M  ++ +    T+V +L ACA+ G
Sbjct: 191 MFDEIP-VKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSG 249

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           +   G+Q+H ++       NL + N LI +YS+  +LE A  +F  + + ++ SWN++I 
Sbjct: 250 SIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIG 309

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            YT +     A  LF  M  S                                   G +P
Sbjct: 310 GYTHMNLYKEALLLFQDMLRS-----------------------------------GEKP 334

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILR--NGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           N  ++  +L A   L  +  GR  H YI +   G+     + TSL+DMY K   ++ AQ+
Sbjct: 335 NDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQ 394

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VFD+M NR++ +WN++I G+   G    A  + ++M +  I+PD +++  L+S  S  G 
Sbjct: 395 VFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 454

Query: 649 SKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                 I   M ++  + P +  +  +I     +  ++E+ K    M+ E   P+     
Sbjct: 455 LDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEME---PDGVIWC 511

Query: 708 SLLQTCGGLGLLQNGK 723
           SLL+ C   G ++ G+
Sbjct: 512 SLLKACKMHGNVELGE 527


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 260/872 (29%), Positives = 443/872 (50%), Gaps = 84/872 (9%)

Query: 242  DFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG-KGVIFRSRILTII 300
            D T A +AF     R+  D + F  D+ +  G V + L+ + ++H   G       L  +
Sbjct: 53   DATGARQAFDEIPHRNTLDHALF--DH-ARRGSVHQALDHFLDVHRCHGGRVGGGALVGV 109

Query: 301  LKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            LK+C  +    LG ++H   I+ G D  DV +  +L++ Y K   V    K+F E     
Sbjct: 110  LKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVF-EAMPKR 168

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            + + W  ++   +++    + ++LF  M+       S T   +L   A  G    G+++H
Sbjct: 169  NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
               +K    S + VCN L++MY++                                G V+
Sbjct: 229  AQSVKFGCCSTVFVCNSLMNMYAK-------------------------------CGLVE 257

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A  +F  M +     D+++WN L++G   +G     L L    +S       S+ + V+
Sbjct: 258  EARVVFCGMETR----DMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVI 313

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNI 598
            +    ++ L   R+ H  +L+ G      V T+LMD Y K   L NA ++F  M  ++N+
Sbjct: 314  KLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNV 373

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS-------------------- 638
            V+W ++I+G    G    A  + ++M E+ + P+  ++++                    
Sbjct: 374  VSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKT 433

Query: 639  -----------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                       L++ YS    ++EAL I   +       +VV+W+++++   Q  +   +
Sbjct: 434  NYECTSIVGTALLASYSKLCNTEEALSIFKMIDQK----DVVSWSAMLTCYAQAGDSDGA 489

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCG----GLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
               FI+M    +KPN  T+SS++  C     G+ L   G++ H + +K+       V++ 
Sbjct: 490  TNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDL---GRQFHAISIKHRCHDALCVSSA 546

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            L+ MY++ G+++SA+ +F +  ++ L SWN M+ G+A +G  ++A+ +F ++   G + D
Sbjct: 547  LVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMD 606

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             +TF +++  C ++GLVEEG +YFDSM+ DY I PT+EHY+CMVDL  +AG LDEA   I
Sbjct: 607  GVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLI 666

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              M F     +W  LLG+C++H ++E  ++A+ +L  LEP +SA Y L+ N+ + + +W+
Sbjct: 667  EGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWK 726

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            + + +R  MD   VK     SWIQI   VH F A    HP + +IY +L  + +++K+ G
Sbjct: 727  EKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEG 786

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            Y PDT     ++ EE+K  +L  H+E+LA+ +GL+ T   AP+ + KN RVC DCHT  K
Sbjct: 787  YCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIK 846

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +S +  REI +RD +RFHHF  G CSC D W
Sbjct: 847  MVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 129/585 (22%), Positives = 237/585 (40%), Gaps = 83/585 (14%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  H   I+ G       +  SL+  Y+++       K F     R+   W+S L  Y  
Sbjct: 123 KQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQ 182

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G + +++E++  +  +GV   S     +L +        LG  VHA  +K G    V 
Sbjct: 183 -DGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVF 241

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  +LMN Y KC  VE A  +F  + +  D + WN ++   + N     A++LF + + S
Sbjct: 242 VCNSLMNMYAKCGLVEEARVVFCGM-ETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSS 300

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                  T   +++ CA +      +Q+H  VLK    S  +V   L+  YS+  +L  A
Sbjct: 301 ITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNA 360

Query: 451 TRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
             +F  M    N+ SW +MI+     G V +A +LF++M    + P+  T++ +L+    
Sbjct: 361 LDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA--- 417

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                          S+   P                      + H  +++   +    V
Sbjct: 418 ---------------SVASLPP---------------------QIHAQVIKTNYECTSIV 441

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GT+L+  Y K    + A  +F  +  +++V+W+++++ Y   G    A  +  +M    +
Sbjct: 442 GTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGL 501

Query: 630 KPD------------------------------------LVSWNSLVSGYSIWGQSKEAL 653
           KP+                                    L   ++LVS Y+  G  + A 
Sbjct: 502 KPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            I     +     ++V+W S++SG  Q+   +++L  F QM+ E I+ +  T  S++  C
Sbjct: 562 CIFERQTDR----DLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGC 617

Query: 714 GGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
              GL++ G+     +    G          ++D+YS++G L  A
Sbjct: 618 AHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEA 662



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 9/302 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYF-SRSYADWSSFL 265
           L   +  H+ ++K G   +  +++ +L+  Y + G   +A   F L   S++   W++ +
Sbjct: 322 LGLARQLHSSVLKRG-FHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMI 380

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
                  G+V     ++  +   GV       + IL          L  ++HA +IK  +
Sbjct: 381 NGCIQ-NGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVIKTNY 435

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           +    +  AL+  Y K  + E A  +F  + D +D + W+ ++    +    + A  +F 
Sbjct: 436 ECTSIVGTALLASYSKLCNTEEALSIFKMI-DQKDVVSWSAMLTCYAQAGDSDGATNIFI 494

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHE-GKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           +M     K    TI  ++ ACA   A  + G+Q H   +K      L V + L+SMY+R 
Sbjct: 495 KMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARK 554

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +E A  +F+   D +L SWNSM+S Y   GY   A  +F +M +  I+ D +T+  ++
Sbjct: 555 GSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVI 614

Query: 505 SG 506
            G
Sbjct: 615 MG 616



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 108/247 (43%), Gaps = 7/247 (2%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HAQ+IK    +    +V  +L+  Y +  +   A   F +   +    WS+ L  Y    
Sbjct: 427 HAQVIKTN--YECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQ-A 483

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHL 331
           G+      ++ ++   G+      ++ ++  C    A   LG + HA  IK      + +
Sbjct: 484 GDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCV 543

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             AL++ Y +   +ESA  +F   +D  D + WN ++    ++   + A+ +FR+M+   
Sbjct: 544 SSALVSMYARKGSIESAQCIFERQTD-RDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEG 602

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELA 450
            +    T + ++  CA  G   EG++    + +   +   +    C++ +YSR  KL+ A
Sbjct: 603 IEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEA 662

Query: 451 TRVFDSM 457
             + + M
Sbjct: 663 MSLIEGM 669


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 751

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/712 (32%), Positives = 380/712 (53%), Gaps = 67/712 (9%)

Query: 396  SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
            ++T+  ++Q  A+    ++GKQ+H  +++     N  + N  +++YS+  +L+   ++FD
Sbjct: 75   TKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFD 134

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
             M   N+ SW S+I+ +        A S F +M   RI+ +I T   L            
Sbjct: 135  KMSQRNMVSWTSIITGFAHNSRFQEALSSFCQM---RIEGEIATQFAL------------ 179

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
                                S VLQA T L  +++G + H  +++ G   +L+VG++L D
Sbjct: 180  --------------------SSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTD 219

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            MY K   L +A + F+ M  ++ V W S+I G+   G F  A     +M  +++  D   
Sbjct: 220  MYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHV 279

Query: 636  WNSLVSGYSI-----WGQSKEALVIIHHMKNSGIYPN----------------------- 667
              S +S  S      +G+S  A ++    +      N                       
Sbjct: 280  LCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHS 339

Query: 668  ----VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
                +V+ T++I G ++ +   ++L  F+ +++  I+PN  T +SL++ C     L++G 
Sbjct: 340  DCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGS 399

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            ++H   +K  F +D +V++ L+DMY K G    + ++F +  N    +WN ++  F+ +G
Sbjct: 400  QLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHG 459

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
             G+ AI  F+ ++  G +P+A+TF  LL  C ++G+VE+G  YF SM   Y ++P  EHY
Sbjct: 460  LGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHY 519

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            SC++DLLG+AG L EA DFI  MPF+P+   W + LG+C+IHG +E A+ A+ +L KLEP
Sbjct: 520  SCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEP 579

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             NS  + L+ N+ A   +WEDV+ LR  + +  +  +  +SW+ I    HVF  E   HP
Sbjct: 580  ENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHP 639

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
               EIY +L +L+ ++K++GYVP T  V  D+D+  K K+L  H+E++A+ + L+   + 
Sbjct: 640  QKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTG 699

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             PI V KN RVCSDCH+A K++S V  R I +RD +RFHHF  G CSC D W
Sbjct: 700  MPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 226/518 (43%), Gaps = 41/518 (7%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L+  K  HA +I+ G + N+  +    +  Y + G+     K F     R+   W+S + 
Sbjct: 91  LNKGKQLHAMLIRGGCLPNTF-LSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIIT 149

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            + +     QE L  + ++  +G I     L+ +L+ CT L A   G +VH  ++K GF 
Sbjct: 150 GF-AHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFG 208

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            ++ +   L + Y KC ++  A K F E+   +D +LW  +I   ++N  ++ A+  + +
Sbjct: 209 CELFVGSNLTDMYSKCGELSDACKAFEEMP-CKDAVLWTSMIDGFVKNGDFKKALTAYMK 267

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M           +   L AC+ + A   GK +H  +LK   E    + N L  MYS++  
Sbjct: 268 MVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGD 327

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +  A+ VF    D         IS                          I++   ++ G
Sbjct: 328 MVSASNVFQIHSD--------CIS--------------------------IVSLTAIIDG 353

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
           +      +  L+    ++  G  PN  + + +++A      L++G + HG +++     D
Sbjct: 354 YVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRD 413

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            +V ++L+DMY K     ++ ++FD ++N + +AWN+L+  +   GL  NA +  N M  
Sbjct: 414 PFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIH 473

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYR 685
             +KP+ V++ +L+ G S  G  ++ L     M K  G+ P    ++ +I    +    +
Sbjct: 474 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLK 533

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           E+  F   M  E   PN     S L  C   G ++  K
Sbjct: 534 EAEDFINNMPFE---PNVFGWCSFLGACKIHGDMERAK 568



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 16/204 (7%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           ++ T++ L+QT      L  GK++H + ++ G + + +++   +++YSK G L    ++F
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            K + + + SW  +I GFA     +EA+  F ++   G        +++L AC + G ++
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSC-------MVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
            G        T  + +     + C       + D+  K G L +A      MP K DA +
Sbjct: 194 FG--------TQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCK-DAVL 244

Query: 875 WGALLGSCRIHGHLEYAEIASRRL 898
           W +++     +G  + A  A  ++
Sbjct: 245 WTSMIDGFVKNGDFKKALTAYMKM 268


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 289/951 (30%), Positives = 467/951 (49%), Gaps = 94/951 (9%)

Query: 211  KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
            K  HA+++  G + +   +  +LI  Y + G   SA + F     R    W+S L  Y  
Sbjct: 631  KRAHARIVTSGDLPDRY-LTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689

Query: 271  FGGE----VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE--VHASLIKRG 324
            F       V E   ++G L   G  F    LT+   L   L++ ++ V   VH   +K G
Sbjct: 690  FADSSYENVLEGFRLFGLLREFG--FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIG 747

Query: 325  FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            F+ D+ +  AL+N Y K   V  A  LF ++ +  D +LWN ++   + N   + A++ F
Sbjct: 748  FELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLWNVMLKAYVENSFQDEALRFF 806

Query: 385  REMQ-------FSSAKAI------------SRTIVKMLQACAKVGAFHEGKQIHGY---- 421
                       FS+   +             R   ++     K+  F +G  I  +    
Sbjct: 807  SAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKL 866

Query: 422  ------------------VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
                              +L+S +  +      ++S     + L+L  ++   +   + +
Sbjct: 867  TEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFA 926

Query: 464  SW----NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
                  NS+++ Y+  G V  A   F  +NS  +  D+I+WN ++S +  +      +  
Sbjct: 927  PVVPVSNSLMNMYSKAGVVYAAEKTF--INSPEL--DLISWNTMISSYAQNNLEMEAICT 982

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVT---ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
             R +   G +P+  +++ VL+A +   E      G + H Y ++ G+  D +V T+L+D+
Sbjct: 983  FRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL 1042

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
            Y K   +  A+ +     + ++ +WN+++ GY        A +  + M E  I  D ++ 
Sbjct: 1043 YSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITL 1102

Query: 637  NSLV--SGYSI---WGQSKEALVIIHHMKN-----SGIY--------------------- 665
             + +  SG  I    G+  +A  I     N     SG+                      
Sbjct: 1103 ATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISR 1162

Query: 666  PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            P+ V WT++ISG ++N +   +L  +  M+   ++P+  T ++L++    L  L+ GK+I
Sbjct: 1163 PDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQI 1222

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            H   +K  +  D +V T L+DMY K G+++ A  VFRK   + +  WN M++G A +G+ 
Sbjct: 1223 HANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHV 1282

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
             EA+ LF  +   G QPD +TF  +L+AC +SGL  E +KYFD+M   Y I P IEHYSC
Sbjct: 1283 DEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSC 1342

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            +VD LG+AG + EA + I +MPFK  A+++ ALLG+CR  G  E A+  + +L  L+P +
Sbjct: 1343 LVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSD 1402

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            S+ Y L+ N+ A S +W+DV   R+ M    VK    +SWI +   VH+F  +   HP  
Sbjct: 1403 SSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQA 1462

Query: 966  GEIYFELYHLVSEMKKLG-YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
              IY ++  L+  +++ G YVPDT     D++EEEK + L  H+EKLAI +GL+ T   A
Sbjct: 1463 SLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSA 1522

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             IRVIKN RVC DCH+A K +S +  REI LRD  RFHHFR G CSC D W
Sbjct: 1523 TIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 164/678 (24%), Positives = 298/678 (43%), Gaps = 119/678 (17%)

Query: 312  LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV- 370
            LG   HA ++  G   D +L   L+  Y KC  + SA ++F + SD  D + WN I+   
Sbjct: 629  LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSD-RDLVTWNSILAAY 687

Query: 371  -KLRNEKWENAIK------LFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYV 422
             +  +  +EN ++      L RE  FS    I+R T+  +L+ C   G     + +HGY 
Sbjct: 688  AQFADSSYENVLEGFRLFGLLREFGFS----ITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
            +K   E +L V   L+++Y +   +  A  +FD M + +   WN M+ +Y    + D A 
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 483  SLFNKMNSSRIQPDIITWNCLLSG------------------------HFTHGSYQNVL- 517
              F+  + S   PD    +C++ G                         F  GS  N+  
Sbjct: 804  RFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS--NIFA 861

Query: 518  ----------------------TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                                  TLLR   ++G   +  ++ ++L A      L  G + H
Sbjct: 862  WNKKLTEFLHAGQIVAAIDCFKTLLR--STIGH--DSVTLVIILSAAVGADDLDLGEQIH 917

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
              ++++     + V  SLM+MY K   +  A++ F N    ++++WN++IS Y    L +
Sbjct: 918  ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEM 977

Query: 616  NAKKMLNQMEEEEIKPDLVSWNS------------------------------------- 638
             A      +  + +KPD  +  S                                     
Sbjct: 978  EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 639  -LVSGYSIWGQSKEALVIIHHMKNSGIYP-NVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             L+  YS  G+  EA  ++H     G Y  ++ +W +++ G +++   R++L+ F  M +
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLH-----GKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
              I  +  T+++ ++  G L  L+ GK+I    +K GF  D +V++G++DMY K G++ +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A E+F + +     +W  MI G+   G+   A+ ++H +  +G QPD  TF  L+ A   
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 817  SGLVEEGWK-YFDSMSTDYNIIPTIEHY--SCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
               +E+G + + + +  DY    +++H+  + +VD+  K G + +A+   R M  +    
Sbjct: 1213 LTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VV 1267

Query: 874  IWGALLGSCRIHGHLEYA 891
             W A+L     HGH++ A
Sbjct: 1268 FWNAMLLGLAQHGHVDEA 1285



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L+ GK  H   + +G + D Y+   LI MYSK G+L SAR+VF KS+++ L +WN ++  
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 779 FA-----IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE-----EGWKYFD 828
           +A      Y N  E   LF  L E GF    +T   LL  C  SG V+      G+    
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746

Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
               D  +   + +  C   L+G+A  L         MP + DA +W  +L
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLL------FDKMPER-DAVLWNVML 790



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 78/375 (20%), Positives = 148/375 (39%), Gaps = 73/375 (19%)

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           LK G+ +H  I+ +G   D Y+  +L+ MY K   L +A++VFD   +R++V WNS+++ 
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 608 YC-------------FK--GL------------------------FVNAKKMLNQMEEE- 627
           Y              F+  GL                        FV   + ++    + 
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
             + DL    +LV+ Y  +G   +A ++   M       + V W  ++   ++N    E+
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER----DAVLWNVMLKAYVENSFQDEA 802

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL-LQNGKEIHCLCLKNGFIKDAYVATGLID 746
           L+FF    +    P+    S+L    GG+   + N ++ H   +K      AY       
Sbjct: 803 LRFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK------AY------- 846

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
                     A ++F       + +WN  +  F   G    AI  F  LL +    D++T
Sbjct: 847 ----------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896

Query: 807 FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
              +L+A   +  ++ G +   ++    +  P +   + ++++  KAG +  A       
Sbjct: 897 LVIILSAAVGADDLDLG-EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 867 PFKPDATIWGALLGS 881
           P + D   W  ++ S
Sbjct: 956 P-ELDLISWNTMISS 969


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like
            [Vitis vinifera]
          Length = 731

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/725 (32%), Positives = 375/725 (51%), Gaps = 82/725 (11%)

Query: 356  SDLEDDLLWNEIIMVKLRNEKWENAIKLF---REMQFSSAKAISRTIVKMLQACAKVGAF 412
            S L     WN +I    +  +  NA+ ++   R+M F     ++ +++K   AC +V   
Sbjct: 84   SGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLK---ACGQVSWT 140

Query: 413  HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
              GK+IHG+VLK  L+ ++ V N L+ MY     +E A  VFD M               
Sbjct: 141  QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKM--------------- 185

Query: 473  TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                                ++ D+++W+ ++     +  +   L L+R M  +  RP+ 
Sbjct: 186  --------------------MERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSE 225

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS--LMDMYVKNDCLQNAQEVF 590
             ++  ++    +   ++ G+  H Y++RN  +  + V T+  L+DMY K   L  A+++F
Sbjct: 226  VAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLF 285

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
            + +  + +V                                   SW ++++G     + +
Sbjct: 286  NGLTQKTVV-----------------------------------SWTAMIAGCIRSNRLE 310

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            EA  +    +N     +V+ WT+++S   Q     ++   F QM+   ++P   T+ SLL
Sbjct: 311  EARALFDSTQNR----DVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLL 366

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              C   G L  GK +H    K     D  + T L+DMY+K G++ +A  +F ++ ++ + 
Sbjct: 367  SLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDIC 426

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
             WN +I GFA++G G+EA+ +F E+   G +P+ ITF  LL AC ++GLV EG K F+ M
Sbjct: 427  MWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKM 486

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
               + ++P IEHY CMVDLLG+AG LDEA + I++MP KP+  +WGAL+ +CR+H + + 
Sbjct: 487  VHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQL 546

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             E+A+ +L ++EP N     LM N+ A +NRW D   +R +M  VG+K     S I+++ 
Sbjct: 547  GELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNG 606

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             VH F      HP    I   L  +  ++ + GYVPDT  V  +IDEEEK   L  H+EK
Sbjct: 607  TVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEK 666

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA+ +GL+ T    PIR++KN RVC+DCH A K +S + GR I +RD  RFHHFREG CS
Sbjct: 667  LAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCS 726

Query: 1071 CNDCW 1075
            C D W
Sbjct: 727  CGDYW 731



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/570 (24%), Positives = 251/570 (44%), Gaps = 63/570 (11%)

Query: 154 SINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSK 213
           +I Q +H H  +++  +PT L  PPT     Q  LS                 L   K  
Sbjct: 22  TIQQLQH-HPHSTLKFNPTPLQTPPTS--PSQHDLST----------------LEQTKQI 62

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHY---LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           HA +IK               FH+   +   DF S         S S A W+  +  Y  
Sbjct: 63  HAHIIKTH-------------FHHALQIPLNDFPSG-------LSPS-AQWNFVITSYTK 101

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
              + +  L V+ +L        + +   +LK C ++    LG E+H  ++K+G D DV 
Sbjct: 102 -RNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVF 160

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  ALM  YG+C  VE A  +F ++ +  D + W+ +I    RN++++ A++L REM F 
Sbjct: 161 VGNALMLMYGECACVEYARLVFDKMME-RDVVSWSTMIRSLSRNKEFDMALELIREMNFM 219

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV--CNCLISMYSRNNKLE 448
             +     +V M+   A       GK +H YV++++   ++ V     L+ MY++   L 
Sbjct: 220 QVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLG 279

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           LA ++F+ +    + SW +MI+       ++ A +LF+   +     D++ W  +LS + 
Sbjct: 280 LARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNR----DVMIWTAMLSAYA 335

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                     L   M++ G RP   ++  +L        L  G+  H YI +  ++ D  
Sbjct: 336 QANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCI 395

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           + T+L+DMY K   +  A  +F    +R+I  WN++I+G+   G    A  +  +ME + 
Sbjct: 396 LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQG 455

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLIS----GSLQNEN 683
           +KP+ +++  L+   S  G   E   +   M ++ G+ P +  +  ++       L +E 
Sbjct: 456 VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEA 515

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +         ++   IKPN+    +L+  C
Sbjct: 516 HE-------MIKSMPIKPNTIVWGALVAAC 538


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/775 (31%), Positives = 389/775 (50%), Gaps = 76/775 (9%)

Query: 338  FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
             YGKC  V  A  +F  + +  + + W  I+    RN  +  A+  +R M     +    
Sbjct: 1    MYGKCGSVADALAVFHAI-EHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59

Query: 398  TIVKMLQACAKVGAFHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDS 456
              V  +  C+      +G+ +H  +L++ L E ++ +   LI+MY+R   LELA + FD 
Sbjct: 60   MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M    L                                   +TWN L++G+  +G ++  
Sbjct: 120  MGKKTL-----------------------------------VTWNALIAGYSRNGDHRGA 144

Query: 517  LTLLRGMQSL---GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            L + + M S    G +P+  + S  L A + +  +  GRE     + +G   D  V  +L
Sbjct: 145  LKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNAL 204

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            ++MY K   L++A++VFD +KNR+++AWN++ISGY  +G    A ++  +M   + KP++
Sbjct: 205  INMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNV 264

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSG-------------IYP-------------- 666
            V++  L++  +     ++   I   +K  G             +Y               
Sbjct: 265  VTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFE 324

Query: 667  -----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 +V+TW  LI   +Q    +++L  F QMQ E++ PN  T+S++L  C  LG  + 
Sbjct: 325  RLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQ 384

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            GK +H L        D  +   L++MY++ G+L     VF    +K+L SW+ +I  +A 
Sbjct: 385  GKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQ 444

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G+ +  +  F ELL+ G   D +T  + L+AC + G+++EG + F SM  D+ + P   
Sbjct: 445  HGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYR 504

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            H+ CMVDLL +AG L+ A + I  MPF PDA  W +LL  C++H   + A   + +LF+L
Sbjct: 505  HFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL 564

Query: 902  EPCNS-ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            E  +  +   L+ N+ A + RW+DV + R   +    +     S+I+I+  VH F A   
Sbjct: 565  ESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARKNPGCSYIEINDTVHEFVAGDK 621

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP    I  E+  L  +MK  GYVPD R V  ++ EEEK ++L  H+EKLAI YGL+ T
Sbjct: 622  SHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLIST 681

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                P+ ++KN R C DCH AAK++S + GR+I +RD  RFHHF  G CSC D W
Sbjct: 682  PPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/611 (24%), Positives = 280/611 (45%), Gaps = 76/611 (12%)

Query: 240 FGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELLEVWGELHGKGVIFRSRIL 297
           +G   S A A  ++ +  + +  S+     +F   G  +E L  +  +  +G+     + 
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 298 TIILKLCTKLMAFWLGVEVHASLIK-RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            + + +C+       G  +HA +++ +  +FD+ L  AL+  Y +CRD+E A K F E+ 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI---SRTIVKMLQACAKVGAFH 413
             +  + WN +I    RN     A+K++++M   S + +   + T    L AC+ VG   
Sbjct: 122 K-KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           +G++I    + S   S+  V N LI+MYS+   LE A +VFD +K+ ++ +WN+MIS Y 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G    A  LF +M  +  +P+++T+  LL+                            
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLT---------------------------- 272

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK-NDCLQNAQEVFDN 592
                  A T L  L+ GR  H  +  +G + DL +G  L++MY K +  L+ A++VF+ 
Sbjct: 273 -------ACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFER 325

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE- 651
           ++ R+++ WN LI  Y   G   +A  +  QM+ E + P+ ++ ++++S  ++ G  ++ 
Sbjct: 326 LRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385

Query: 652 ----ALVIIHHMKNSGIYPN--------------------------VVTWTSLISGSLQN 681
               AL+     K   +  N                          +V+W++LI+   Q+
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYV 740
            + R  L+ F ++ QE +  +  TM S L  C   G+L+ G +    +   +G   D   
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRH 505

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLA-SWNCMIMGFAIYGNGKEAILLFHELLETG 799
              ++D+ S++G L++A  +         A +W  ++ G  ++ + K A  +  +L E  
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELE 565

Query: 800 FQPDAITFTAL 810
            + +  T T L
Sbjct: 566 SEDEHSTVTLL 576



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 153/316 (48%), Gaps = 15/316 (4%)

Query: 224 WNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQ--ELLE 280
           + SD +V+ +LI  Y + G   SA K F    +R    W++ +  Y   G   Q  EL +
Sbjct: 194 YASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQ 253

Query: 281 VWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
             G    K       ++T I  L  CT L     G  +H  + + G++ D+ +   L+N 
Sbjct: 254 RMGPNDPK-----PNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNM 308

Query: 339 YGKCRD-VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
           Y KC   +E A ++F  +    D + WN +I+  ++  + ++A+ +F++MQ  +      
Sbjct: 309 YTKCSSSLEEARQVFERLR-TRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEI 367

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+  +L ACA +GA  +GK +H  +     ++++ + N L++MY+R   L+    VF ++
Sbjct: 368 TLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI 427

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY--QN 515
           +D +L SW+++I++Y   G+       F ++    +  D +T    LS   +HG    + 
Sbjct: 428 RDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA-CSHGGMLKEG 486

Query: 516 VLTLLRGMQSLGFRPN 531
           V + L  +   G  P+
Sbjct: 487 VQSFLSMVGDHGLAPD 502


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/672 (35%), Positives = 360/672 (53%), Gaps = 79/672 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F  +     +P+++ WN +  GH       + L L   M SLG  PN
Sbjct: 10   FEGLPY---AISVFETIQ----EPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPN 62

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L++  +L+  K G + HG++L+ G + DLYV TSL+ MYV+N+ L++A +VFD
Sbjct: 63   SYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFD 122

Query: 592  NMKNRNIVA-------------------------------WNSLISGYCFKGLFVNAKKM 620
               +R++V+                               WN++ISGY   G +  A ++
Sbjct: 123  RSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALEL 182

Query: 621  LNQMEEEEIKPD----------------------LVSW-------------NSLVSGYSI 645
              +M +  ++PD                      + SW             N+L+  YS 
Sbjct: 183  FKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSK 242

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   +     Y +V++W  LI G      Y+E+L  F +M +    PN  T
Sbjct: 243  CGEMETACGLFLGLS----YKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVT 298

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            M S+L  C  LG +  G+ IH    K   G    + + T LIDMYSK G++++A +VF  
Sbjct: 299  MLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNS 358

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +K+L +WN MI GFA++G    A  +F  + +   +PD ITF  LL+AC ++G+++ G
Sbjct: 359  MLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLG 418

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F SM+ +Y I P +EHY CM+DLLG +G   EA + I TM  +PD  IW +LL +C+
Sbjct: 419  RHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACK 478

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG++E  E  ++ LFK+EP N  +Y L+ N+ A + RW +V R+R  +++ G+K V   
Sbjct: 479  MHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGC 538

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I+ID +VH F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K   
Sbjct: 539  SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGA 598

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RFHH
Sbjct: 599  LRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 658

Query: 1064 FREGECSCNDCW 1075
            FR+G CSCND W
Sbjct: 659  FRDGVCSCNDYW 670



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 212/469 (45%), Gaps = 71/469 (15%)

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G++  S     +LK C KL A   G+++H  ++K G++ D+++  +L++ Y +   +E A
Sbjct: 58  GLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDA 117

Query: 349 NKLFSEVS------------------------------DLEDDLLWNEIIMVKLRNEKWE 378
           +K+F   S                               ++D + WN +I   +    ++
Sbjct: 118 HKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYK 177

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A++LF+EM  ++ +    T+V ++ A A+ G+   G+Q+H ++      SNL + N LI
Sbjct: 178 EALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALI 237

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
             YS+  ++E A  +F  +   ++ SWN +I  YT L     A  LF +M          
Sbjct: 238 DFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEM---------- 287

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
                                LR  +S    PN  ++  +L A   L  +  GR  H YI
Sbjct: 288 ---------------------LRSGES----PNDVTMLSILHACAHLGAIDIGRWIHVYI 322

Query: 559 LR--NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
            +   G+     + TSL+DMY K   ++ A +VF++M ++++ AWN++I G+   G    
Sbjct: 323 DKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANA 382

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLI 675
           A  + ++M + EIKPD +++  L+S  S  G       I   M  N  I P +  +  +I
Sbjct: 383 AFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMI 442

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
                +  ++E+ +    M  E   P+     SLL+ C   G ++ G++
Sbjct: 443 DLLGHSGLFKEAEEMISTMTME---PDGVIWCSLLKACKMHGNVELGEK 488



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 141/277 (50%), Gaps = 4/277 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y   G   SA   F     +    W++ +  Y    G  +E LE++ E+    V 
Sbjct: 134 ALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVE-TGNYKEALELFKEMMKTNVR 192

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  ++    +  +  LG +VH+ +   GF  ++ +  AL++FY KC ++E+A  L
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +S  +D + WN +I        ++ A+ LF+EM  S       T++ +L ACA +GA
Sbjct: 253 FLGLS-YKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311

Query: 412 FHEGKQIHGYVLK--SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
              G+ IH Y+ K    + +  S+   LI MYS+   +E A +VF+SM   +L +WN+MI
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMI 371

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             +   G  + A+ +F++M  + I+PD IT+  LLS 
Sbjct: 372 FGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSA 408


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/673 (36%), Positives = 359/673 (53%), Gaps = 80/673 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F        +P+++ WN +L G  +     + L +   M S G  PN
Sbjct: 30   FDGLPY---AVSVFETXQ----EPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPN 82

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L++  + +  + GR+ H  +++ G + D Y  TSL+ MY +N  L++A++VFD
Sbjct: 83   AYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFD 142

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN-------------- 637
                R++V+  +LI+GY  +G   +A+K+ + + E     D+VSWN              
Sbjct: 143  XSSQRDVVSCTALITGYASRGDVRSARKVFDXITER----DVVSWNAMITGYVENCGYEE 198

Query: 638  ------------------SLVSGYSIWGQSK--------EALVIIHHMKNS--------- 662
                              +LVS  S   QS           LV  HH   S         
Sbjct: 199  ALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFI 258

Query: 663  GIYP------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            G+Y                   +VV+W +LI G      Y+E+L  F +M +    PN  
Sbjct: 259  GLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 318

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
            TM S+L  C  LG +  G+ IH    K   G    + + T LIDMY+K G++++A +VF 
Sbjct: 319  TMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFN 378

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
               +K+L+SWN MI GFA++G    A  LF  + + G +PD IT   LL+AC +SGL++ 
Sbjct: 379  SMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDL 438

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G   F S++ DYNI P +EHY CM+DLLG AG   EA + I  MP +PD  IW +LL +C
Sbjct: 439  GRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKAC 498

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            ++HG+LE AE  +++L ++EP NS +Y L+ N+ A + RWEDV R+R  ++  G+K V  
Sbjct: 499  KMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPG 558

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             S I+ID +VH F      HP + EIY  L  +   +++ G+VPDT  V Q+++EE K  
Sbjct: 559  CSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEG 618

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLAI +GL+ TK    + V+KN RVC +CH A K +S +  REI  RD  RFH
Sbjct: 619  ALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFH 678

Query: 1063 HFREGECSCNDCW 1075
            HFR+G CSC D W
Sbjct: 679  HFRDGVCSCCDYW 691



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/498 (23%), Positives = 213/498 (42%), Gaps = 79/498 (15%)

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           L+WN ++     +    + ++++  M        + T   +L++CAK   F EG+QIH  
Sbjct: 49  LIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQ 108

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           V+K   E +      LISMY+RN +LE A +VFD     ++ S  ++I+ Y   G V  A
Sbjct: 109 VMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSA 168

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             +F+ +     + D+++WN +++G+  +  Y+  L L + M     RP+  ++  VL A
Sbjct: 169 RKVFDXIT----ERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSA 224

Query: 542 VTELRLLKYGRESHGYI-LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
             +   ++ GRE H  +   +G    L +  + + +Y K   ++ A  +F+ +  +++V+
Sbjct: 225 CAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVS 284

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------DLVSW------ 636
           WN+LI GY    L+  A  +  +M      P                  D+  W      
Sbjct: 285 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYID 344

Query: 637 -------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                         SL+  Y+  G  + A    H + NS ++ ++ +W ++I G   +  
Sbjct: 345 KRLKGVTNGSALRTSLIDMYAKCGDIEAA----HQVFNSMMHKSLSSWNAMIFGFAMHGR 400

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              +   F +M++  I+P+  T+  LL  C   GLL  G+ I                  
Sbjct: 401 ANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHI------------------ 442

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
                      KS  + +  +    L  + CMI      G  KEA  + H +     +PD
Sbjct: 443 ----------FKSVTQDY--NITPKLEHYGCMIDLLGHAGLFKEAEEIIHMM---PMEPD 487

Query: 804 AITFTALLAACKNSGLVE 821
            + + +LL ACK  G +E
Sbjct: 488 GVIWCSLLKACKMHGNLE 505



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 152/648 (23%), Positives = 278/648 (42%), Gaps = 104/648 (16%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYL---EFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           HAQM+K G + N++  +  L+   +    F     A   F      +   W++ L    S
Sbjct: 2   HAQMVKTG-LHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
              ++   LE++  +   G +  +     +LK C K   F  G ++HA ++K G + D +
Sbjct: 61  -SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRY 119

Query: 331 LKCALMNFYGK---------------------CR----------DVESANKLFSEVSDLE 359
              +L++ Y +                     C           DV SA K+F  +++  
Sbjct: 120 AHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITE-R 178

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + WN +I   + N  +E A++LF+EM  ++ +    T+V +L ACA+ G+   G++IH
Sbjct: 179 DVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIH 238

Query: 420 GYVLK-SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
             V       S+L + N  I +YS+   +E+A+ +F+ +   ++ SWN++I  YT +   
Sbjct: 239 TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLY 298

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
             A  LF +M  S                                   G  PN  ++  V
Sbjct: 299 KEALLLFQEMLRS-----------------------------------GESPNDVTMLSV 323

Query: 539 LQAVTELRLLKYGRESHGYILR--NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
           L A   L  +  GR  H YI +   G+     + TSL+DMY K   ++ A +VF++M ++
Sbjct: 324 LPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHK 383

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           ++ +WN++I G+   G    A  + ++M +  I+PD ++   L+S  S  G       I 
Sbjct: 384 SLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIF 443

Query: 657 HHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC-- 713
             + ++  I P +  +  +I        ++E+ +    M  E   P+     SLL+ C  
Sbjct: 444 KSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPME---PDGVIWCSLLKACKM 500

Query: 714 -GGLGLLQN-GKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKT 768
            G L L ++  +++  +  +N     +YV   L ++Y+ +G   ++   REV      K 
Sbjct: 501 HGNLELAESFAQKLMEIEPEN---SGSYVL--LSNIYATAGRWEDVARIREVLNGKGMKK 555

Query: 769 LASWNCM---------IMGFAIYGNGKEAILLFHE----LLETGFQPD 803
           +   + +         I+G  ++   +E   +  E    L E GF PD
Sbjct: 556 VPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPD 603



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 3/101 (2%)

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGN---LKSAREVFRKSANKTLASWNCMIMGFAIY 782
           H   +K G     Y  + L+++   S +   L  A  VF       L  WN M+ G A  
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
            +    + ++  ++  G  P+A TF  LL +C  S   EEG
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEG 102


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
            At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/665 (34%), Positives = 355/665 (53%), Gaps = 42/665 (6%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            + +H  ++   L  N S+   L+  Y+    +  A +VFD + + N+   N MI SY   
Sbjct: 59   RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G+      +F  M    ++PD  T+ C+L      G+                       
Sbjct: 119  GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT----------------------- 155

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
                        +  GR+ HG   + GL   L+VG  L+ MY K   L  A+ V D M  
Sbjct: 156  ------------IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            R++V+WNSL+ GY     F +A ++  +ME  +I  D  +  SL+   S    + E ++ 
Sbjct: 204  RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS--NTTTENVMY 261

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
            +  M       ++V+W  +I   ++N    E+++ + +M+ +  +P++ +++S+L  CG 
Sbjct: 262  VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
               L  GK+IH    +   I +  +   LIDMY+K G L+ AR+VF    ++ + SW  M
Sbjct: 322  TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I  +   G G +A+ LF +L ++G  PD+I F   LAAC ++GL+EEG   F  M+  Y 
Sbjct: 382  ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 441

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P +EH +CMVDLLG+AG + EA+ FI+ M  +P+  +WGALLG+CR+H   +   +A+
Sbjct: 442  ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAA 501

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
             +LF+L P  S  Y L+ N+ A + RWE+V  +R+ M   G+K     S +++++I+H F
Sbjct: 502  DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                  HP + EIY EL  LV +MK+LGYVPD+     D++EE+K   L  H+EKLAIV+
Sbjct: 562  LVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVF 621

Query: 1016 GLMKTK-----SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
             LM TK     S   IR+ KN R+C DCH AAK +S +  REI +RD  RFH FR G CS
Sbjct: 622  ALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCS 681

Query: 1071 CNDCW 1075
            C D W
Sbjct: 682  CGDYW 686



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 241/544 (44%), Gaps = 65/544 (11%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VH+ +I      +  L   LM  Y   +DV SA K+F E+ +  + ++ N +I   + N 
Sbjct: 61  VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE-RNVIIINVMIRSYVNNG 119

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +   +K+F  M   + +    T   +L+AC+  G    G++IHG   K  L S L V N
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+SMY +   L  A  V D M   ++ SWNS++  Y      D A  +  +M S +I  
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239

Query: 496 D---------------------------------IITWNCLLSGHFTHGSYQNVLTLLRG 522
           D                                 +++WN ++  +  +      + L   
Sbjct: 240 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M++ GF P+  S++ VL A  +   L  G++ HGYI R  L  +L +  +L+DMY K  C
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           L+ A++VF+NMK+R++V+W ++IS Y F G   +A  + +++++  + PD +++ + ++ 
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419

Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S  G  +E       M +   I P +     ++    +    +E+ +F   M  E   P
Sbjct: 420 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME---P 476

Query: 702 NSTTMSSLLQTC-----GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           N     +LL  C       +GLL   K       ++G+    YV   L ++Y+K+G  + 
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY----YVL--LSNIYAKAGRWEE 530

Query: 757 AREV--------FRKSANKTLASWNCMIMGFAIYGNG--------KEAILLFHELLETGF 800
              +         +K+   +    N +I  F +            +E  +L  ++ E G+
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGY 590

Query: 801 QPDA 804
            PD+
Sbjct: 591 VPDS 594



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 9/309 (2%)

Query: 250 FFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
           FF    +S   W+  +  Y      V E +E++  +   G    +  +T +L  C    A
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPV-EAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
             LG ++H  + ++    ++ L+ AL++ Y KC  +E A  +F  +    D + W  +I 
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS-RDVVSWTAMIS 383

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALE 428
               + +  +A+ LF ++Q S     S   V  L AC+  G   EG+     +     + 
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             L    C++ +  R  K++ A R    M  + N   W +++ +       D+     +K
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503

Query: 488 MNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
           +   ++ P+   +  LLS  +   G ++ V  +   M+S G + N  + +V +  +    
Sbjct: 504 L--FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561

Query: 547 LLKYGRESH 555
           L+  G  SH
Sbjct: 562 LV--GDRSH 568


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/643 (36%), Positives = 352/643 (54%), Gaps = 50/643 (7%)

Query: 442  SRNNKLELATRVFDSMKDHNLSS----WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
            +R+N ++L  +    +  H L         M++ Y   G +D A  +F+++++    P  
Sbjct: 88   TRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDN----PSS 143

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRG---MQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            + +N ++  +  HG        L     M  LG   +  ++  VL++  +L  +  GR  
Sbjct: 144  LLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCV 203

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            HG  LR GL+ D YVG SL+DMYVK   + +A+++FD M  R++ +WN+LI+GY  +G  
Sbjct: 204  HGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEI 263

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
              A+ +  +ME   I    VSW +++SGY+  G +++AL +   M   G           
Sbjct: 264  GVAEDLFERMEHRNI----VSWTAMISGYTQNGFAEQALGLFDEMLQDG----------- 308

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
                                   ++KPN  T+ S+L  C     L+ G+ IH      G 
Sbjct: 309  ----------------------SEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGL 346

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSAN--KTLASWNCMIMGFAIYGNGKEAILLF 792
              ++ V T L  MY+K  +L  AR  F   A   K L +WN MI  +A +G G EA+ +F
Sbjct: 347  HLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIF 406

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
              +L  G QPDA+TF  LL+ C +SGL++ G  +F+ M T +++ P +EHY+C+VDLLG+
Sbjct: 407  ENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGR 466

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG L EA + I  MP +   ++WGALL +CR H +LE AE+A+RRLF LEP NS NY L+
Sbjct: 467  AGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLL 526

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             NL A +  WE+V++LR  +   G+K     SWI+I+   H+F      HP   EIY  L
Sbjct: 527  SNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFL 586

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L  ++K  GY+PDT  V  DI EEEK   L +H+EKLAI +GL+ T+    +RV KN 
Sbjct: 587  EALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNL 646

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH A K++S +  REI +RD  RFH F++G CSC D W
Sbjct: 647  RICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 169/355 (47%), Gaps = 12/355 (3%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           I +  T+     LG + HA ++  G   +  L   ++  Y    D++SA  +F  + D  
Sbjct: 83  IFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRI-DNP 141

Query: 360 DDLLWNEIIMVKLRN---EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             LL+N II    R+         ++ +  M F      + T+  +L++CA +     G+
Sbjct: 142 SSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGR 201

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +HG  L+  LE +  V   LI MY +   +  A ++FD M   +++SWN++I+ Y   G
Sbjct: 202 CVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEG 261

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG--FRPNGSS 534
            + VA  LF +M       +I++W  ++SG+  +G  +  L L   M   G   +PN  +
Sbjct: 262 EIGVAEDLFERMEHR----NIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVT 317

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM- 593
           +  VL A  +   L+ GR  H +    GL  +  V T+L  MY K   L  A+  FD + 
Sbjct: 318 IVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIA 377

Query: 594 -KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
              +N++AWN++I+ Y   G  V A  +   M    ++PD V++  L+SG S  G
Sbjct: 378 QNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSG 432



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 145/332 (43%), Gaps = 37/332 (11%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           +  HAQ++  G   N+  +   ++  Y   GD  SA   F    + S   ++S +  Y  
Sbjct: 97  QQAHAQIVLHGLQPNAF-LAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTR 155

Query: 271 FGGEVQEL--LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
            G        LE +  +H  G++  +  L  +LK C  L    +G  VH   ++ G + D
Sbjct: 156 HGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGD 215

Query: 329 VHLKCALMNFYGKCRDVESANKLFSE--VSDL------------------EDDLL----- 363
            ++  +L++ Y KC  +  A KLF +  V D+                   +DL      
Sbjct: 216 FYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEH 275

Query: 364 -----WNEIIMVKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGK 416
                W  +I    +N   E A+ LF EM    S  K    TIV +L ACA+  A   G+
Sbjct: 276 RNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGR 335

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH--NLSSWNSMISSYTG 474
           +IH +     L  N SV   L  MY++   L  A   FD +  +  NL +WN+MI++Y  
Sbjct: 336 RIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYAS 395

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            G    A S+F  M  + +QPD +T+  LLSG
Sbjct: 396 HGCGVEAVSIFENMLRAGVQPDAVTFMGLLSG 427



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 85/209 (40%), Gaps = 21/209 (10%)

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           P+ ++ + + Q       ++ G++ H   + +G   +A++A  ++ MY+ SG+L SA  V
Sbjct: 75  PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGK------EAILLFHELLETGFQPDAITFTALLAAC 814
           F +  N +   +N +I  +  +G         EA    H L   G   D  T   +L +C
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFL---GLLGDNFTLPFVLKSC 191

Query: 815 KN-----SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +      G    G      +  D+ +       + ++D+  K G + +A      M  +
Sbjct: 192 ADLSRVCMGRCVHGQGLRVGLEGDFYV------GASLIDMYVKCGVIGDARKLFDKMIVR 245

Query: 870 PDATIWGALLGSCRIHGHLEYAEIASRRL 898
            D   W AL+      G +  AE    R+
Sbjct: 246 -DMASWNALIAGYMKEGEIGVAEDLFERM 273


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/676 (34%), Positives = 357/676 (52%), Gaps = 83/676 (12%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F  +     +P+++ WN +L GH +     + L +   M SLG  PN
Sbjct: 11   FDGLPY---AISVFETIQ----EPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPN 63

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              S   +L++  + +  + GR+ H  +L+ G   D YV TSL+ MY +N  L++A++VFD
Sbjct: 64   SYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFD 123

Query: 592  -------------------------------NMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
                                            +  R++V+WN++I+GY   G +  A ++
Sbjct: 124  ASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALEL 183

Query: 621  LNQMEEEEIKPD----------------------LVSW-----------------NSLVS 641
              +M    ++PD                      + SW                 N+L+ 
Sbjct: 184  FKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALID 243

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             YS  G  + A  +   +       +VV+W +LI G      Y+E+L  F +M +    P
Sbjct: 244  LYSKCGDVETAFGLFEGLSCK----DVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP 299

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN--GFIKDAYVATGLIDMYSKSGNLKSARE 759
            N  T+ S+L  C  LG +  G+ IH    K   G   +  + T LIDMY+K G++++A +
Sbjct: 300  NDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQ 359

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF     ++L+SWN MI GFA++G    A  LF  +     +PD ITF  LL+AC +SGL
Sbjct: 360  VFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGL 419

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            ++ G + F SM+ DYN+ P +EHY CM+DLLG +G   EA + I TMP +PD  IW +LL
Sbjct: 420  LDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             +C+ HG+LE AE  +++L K+EP NS +Y L+ N+ A + RWEDV R+R  ++  G+K 
Sbjct: 480  KACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKK 539

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
            V   S I++D +VH F      HP   EIY  L  +  ++++ G+ PDT  V Q+++EE 
Sbjct: 540  VPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEW 599

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K   L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  
Sbjct: 600  KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRT 659

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHFR+G CSC D W
Sbjct: 660  RFHHFRDGVCSCCDYW 675



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 223/475 (46%), Gaps = 84/475 (17%)

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
           C++S +   + L  A  VF+++++ NL  WN+M                           
Sbjct: 5   CVVSPHF--DGLPYAISVFETIQEPNLLIWNTM--------------------------- 35

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                   L GH +     + L +   M SLG  PN  S   +L++  + +  + GR+ H
Sbjct: 36  --------LRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIH 87

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
             +L+ G   D YV TSL+ MY +N  L++A++VFD   +R++V+  +LI+GY  +G F 
Sbjct: 88  AQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFR 147

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
           +A+K+ +++ E     D+VSWN++++GY   G+ +EAL +   M  + + P+  T  S++
Sbjct: 148 SARKVFDEITER----DVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVV 203

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC----LCLK 731
           S                                    C   G ++ G+++H         
Sbjct: 204 SA-----------------------------------CAQSGSIELGRQVHSWVDDDDDD 228

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
           +GF     +   LID+YSK G++++A  +F   + K + SWN +I G+      KEA+LL
Sbjct: 229 HGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLL 288

Query: 792 FHELLETGFQPDAITFTALLAACKNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLL 850
           F E+L +G  P+ +T  ++L AC + G ++ G W +         +       + ++D+ 
Sbjct: 289 FQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMY 348

Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA-EIASR-RLFKLEP 903
            K G ++ A     +M ++  ++ W A++    +HG    A ++ SR R  ++EP
Sbjct: 349 AKCGDIEAAHQVFNSMLYRSLSS-WNAMIFGFAMHGRANAAFDLFSRMRGNRVEP 402



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 218/501 (43%), Gaps = 82/501 (16%)

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           L+WN ++     +    +A++++  M        S +   +L++CAK  AF EG+QIH  
Sbjct: 30  LIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQ 89

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           VLK     +  V   LISMY+RN  LE A +VFD+    ++ S  ++I+ Y   G    A
Sbjct: 90  VLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSA 149

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             +F+++     + D+++WN +++G+  +G Y+  L L + M     RP+  ++  V+ A
Sbjct: 150 RKVFDEIT----ERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSA 205

Query: 542 VTELRLLKYGRESHGYI----LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
             +   ++ GR+ H ++      +G    L +  +L+D+Y K   ++ A  +F+ +  ++
Sbjct: 206 CAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKD 265

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------DLVSW--- 636
           +V+WN+LI GY    L+  A  +  +M      P                  D+  W   
Sbjct: 266 VVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHV 325

Query: 637 ----------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                            SL+  Y+  G  + A    H + NS +Y ++ +W ++I G   
Sbjct: 326 YIDKKLKGVTNETSLRTSLIDMYAKCGDIEAA----HQVFNSMLYRSLSSWNAMIFGFAM 381

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           +     +   F +M+   ++P+  T   LL  C   GLL  G++I               
Sbjct: 382 HGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI--------------- 426

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
                         KS  + +  +    L  + CMI      G  KEA  + H +     
Sbjct: 427 -------------FKSMTQDY--NLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTM---PM 468

Query: 801 QPDAITFTALLAACKNSGLVE 821
           +PD + + +LL ACK  G +E
Sbjct: 469 EPDGVIWCSLLKACKKHGNLE 489



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 222/498 (44%), Gaps = 78/498 (15%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ L  + S    V  L E++  +   G +  S     +LK C K  AF  G ++HA +
Sbjct: 32  WNTMLRGHASSSDPVSAL-EMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQV 90

Query: 321 IKRGFDFDVHLKCALMNFYGKC---------------RDV----------------ESAN 349
           +K G   D ++  +L++ Y +                RDV                 SA 
Sbjct: 91  LKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSAR 150

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           K+F E+++  D + WN +I   + N ++E A++LF+EM  ++ +    T+V ++ ACA+ 
Sbjct: 151 KVFDEITE-RDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQS 209

Query: 410 GAFHEGKQIHGYVLKS----ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
           G+   G+Q+H +V          S+L + N LI +YS+                      
Sbjct: 210 GSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSK---------------------- 247

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
                     G V+ A+ LF  ++      D+++WN L+ G+     Y+  L L + M  
Sbjct: 248 ---------CGDVETAFGLFEGLSCK----DVVSWNTLIGGYTHTNLYKEALLLFQEMLR 294

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN--GLDYDLYVGTSLMDMYVKNDCL 583
            G  PN  ++  VL A   L  +  GR  H YI +   G+  +  + TSL+DMY K   +
Sbjct: 295 SGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDI 354

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
           + A +VF++M  R++ +WN++I G+   G    A  + ++M    ++PD +++  L+S  
Sbjct: 355 EAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSAC 414

Query: 644 SIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           S  G       I   M ++  + P +  +  +I     +  ++E+ +    M  E   P+
Sbjct: 415 SHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPME---PD 471

Query: 703 STTMSSLLQTCGGLGLLQ 720
                SLL+ C   G L+
Sbjct: 472 GVIWCSLLKACKKHGNLE 489



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 144/281 (51%), Gaps = 8/281 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y   GDF SA K F     R    W++ +  Y    G  +E LE++ E+    V 
Sbjct: 135 ALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVE-NGRYEEALELFKEMMRTNVR 193

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHA----SLIKRGFDFDVHLKCALMNFYGKCRDVES 347
                L  ++  C +  +  LG +VH+         GF   + +  AL++ Y KC DVE+
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  LF  +S  +D + WN +I        ++ A+ LF+EM  S       T++ +L ACA
Sbjct: 254 AFGLFEGLS-CKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312

Query: 408 KVGAFHEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            +GA   G+ IH Y+ K    + +  S+   LI MY++   +E A +VF+SM   +LSSW
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSW 372

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           N+MI  +   G  + A+ LF++M  +R++PD IT+  LLS 
Sbjct: 373 NAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSA 413


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/813 (30%), Positives = 416/813 (51%), Gaps = 96/813 (11%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            ++N Y K   +  A +LF  +    D   WN ++    +++++  +++ F  M  S   +
Sbjct: 77   MLNGYVKLGRLSDAVELFGRMP-ARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSS 135

Query: 395  ISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             +  T    +++C  +G      Q+ G V K   + +  V   L+ M+ R   ++LA+R+
Sbjct: 136  PNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRL 195

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F  +K+  +   NSM+  Y     VD A  LF+ M     + D+++WN ++S     G  
Sbjct: 196  FVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMP----ERDVVSWNMMVSALSQSGRV 251

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            +  L ++  MQS G R + ++ +  L A   L  L++G++ H  ++RN    D YV ++L
Sbjct: 252  REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASAL 311

Query: 574  MDMY-------------------------------VKNDCLQNAQEVFDNMKN------- 595
            +++Y                               +++ C   + E+F+ M+        
Sbjct: 312  VELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQ 371

Query: 596  --------------------------------RNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
                                            + +V  NSLIS Y       +A+ +   
Sbjct: 372  FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRF 431

Query: 624  MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            M E+    D+VSW S+++ +S  G   +A      M       NV+TW +++   +Q+  
Sbjct: 432  MNEK----DIVSWTSMITAHSQVGNIAKAREFFDGMSTK----NVITWNAMLGAYIQHGA 483

Query: 684  YRESLKFF-IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              + L+ + + + ++D++P+  T  +L + C  LG  + G +I    +K G I D  VA 
Sbjct: 484  EEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVAN 543

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             +I MYSK G +  AR+VF     K + SWN MI G++ +G GK+AI +F ++L+ G +P
Sbjct: 544  AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKP 603

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D I++ A+L+ C +SGLV+EG  YFD M   +NI P +EH+SCMVDLLG+AG+L EA D 
Sbjct: 604  DYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDL 663

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MP KP A +WGALL +C+IHG+ E AE+A++ +F+L+  +S +Y LM  + A + + 
Sbjct: 664  IDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKS 723

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            +D  ++R  M + G+K    +SW++++  VHVF A+   HP    I  +L  L+ ++ +L
Sbjct: 724  DDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARL 783

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYV             +  +  + H+EKLA+ +GLM   +  PI ++KN R+C DCHT  
Sbjct: 784  GYV-----------RTDSPRSEIHHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVI 832

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K +S V GRE  +RD  RFHHF  G CSC D W
Sbjct: 833  KLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 234/484 (48%), Gaps = 11/484 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S++  Y++      A + F     R    W+  +    S  G V+E L++  ++  KGV 
Sbjct: 209 SMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL-SQSGRVREALDMVVDMQSKGVR 267

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S   T  L  C +L +   G ++HA +I+     D ++  AL+  Y KC   + A  +
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGV 327

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+ + D  +++ W  +I   L++  +  +++LF +M+          +  ++  C     
Sbjct: 328 FNSLHD-RNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+Q+H   LKS     + V N LISMY++ + L+ A  +F  M + ++ SW SMI++
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITA 446

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRP 530
           ++ +G +  A   F+ M++     ++ITWN +L  +  HG+ ++ L +   M S    RP
Sbjct: 447 HSQVGNIAKAREFFDGMSTK----NVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRP 502

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           +  +   + +   +L   K G +  G  ++ GL  D  V  +++ MY K   +  A++VF
Sbjct: 503 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVF 562

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
           D +  ++IV+WN++I+GY   G+   A ++ + + +   KPD +S+ +++SG S  G  +
Sbjct: 563 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622

Query: 651 EALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           E       MK    I P +  ++ ++    +  +  E+     +M    +KP +    +L
Sbjct: 623 EGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMP---MKPTAEVWGAL 679

Query: 710 LQTC 713
           L  C
Sbjct: 680 LSAC 683



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 230/543 (42%), Gaps = 54/543 (9%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A+++     L++C   GA    + +HG ++   L S + + N L+  Y     L  A R+
Sbjct: 2   AVTQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRL 61

Query: 454 FDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
             +   H N+ + N M++ Y  LG +  A  LF +M +     D+ +WN L+SG+F    
Sbjct: 62  LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPAR----DVASWNTLMSGYFQSQQ 117

Query: 513 YQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
           Y   L     M   G   PN  + +  +++   L       +  G + + G   D  V  
Sbjct: 118 YLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAA 177

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DM+V+   +  A  +F  +K   I   NS++ GY       +A ++ + M E     
Sbjct: 178 ALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPER---- 233

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           D+VSWN +VS  S  G+ +EAL ++  M++ G                            
Sbjct: 234 DVVSWNMMVSALSQSGRVREALDMVVDMQSKG---------------------------- 265

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
                  ++ +STT +S L  C  L  L+ GK++H   ++N    D YVA+ L+++Y+K 
Sbjct: 266 -------VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKC 318

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G  K A+ VF    ++   +W  +I GF  +G   E++ LF+++       D      L+
Sbjct: 319 GCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLI 378

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
           + C +   +  G +   S+      I  +   + ++ +  K   L  A    R M  K D
Sbjct: 379 SGCCSRMDLCLG-RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEK-D 436

Query: 872 ATIWGALLGSCRIHGHLEYAEIASRRLF--KLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
              W ++     I  H +   IA  R F   +   N   +N M+         ED  R+ 
Sbjct: 437 IVSWTSM-----ITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMY 491

Query: 930 HSM 932
           + M
Sbjct: 492 NVM 494


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/579 (38%), Positives = 335/579 (57%), Gaps = 11/579 (1%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS--SVSVVLQAVTELRLLKYGR 552
            P+I  +N LL     H ++   ++       L   PN    + + VL+A   L  +  G+
Sbjct: 88   PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQ 147

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H ++ + G + +L+V  SL+D+Y K  C   AQ++FD M  R++V+WN+LISGYCF G
Sbjct: 148  KVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSG 207

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
            +   A+ + + M E+    +LVSW++++SGY+  G  +EA  +  +M       NVV+W 
Sbjct: 208  MVDKARMVFDGMMEK----NLVSWSTMISGYARVGNLEEARQLFENMP----MRNVVSWN 259

Query: 673  SLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            ++I+G  QNE Y ++++ F QMQ E  + PN  T+ S+L  C  LG L  GK IH    +
Sbjct: 260  AMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRR 319

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            N      ++   L DMY+K G +  A+ VF +   + + SW+ +IMG A+YG   EA   
Sbjct: 320  NKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNF 379

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F E++E G +P+ I+F  LL AC ++GLV++G +YFD M   Y I P IEHY C+VDLL 
Sbjct: 380  FAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLS 439

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG LD+A   I +MP +P+  +WGALLG CRI+   E  E    R+ +L+  +S +   
Sbjct: 440  RAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVY 499

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ A   R +D    R  M +         SWI+I+  V+ F    + HP +  IY  
Sbjct: 500  LANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSM 559

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            +  L  +MK  GY P T  V  +IDEEEK   L +H+EKLA+ +GL+ T     IR++KN
Sbjct: 560  IRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKN 619

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
             RVC+DCH A K +S +  REI +RD +RFHHF++G+CS
Sbjct: 620  LRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 163/350 (46%), Gaps = 42/350 (12%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T   +L+ACA +    EG+++H +V K   ESNL V N L+ +Y +     +A ++FD M
Sbjct: 129 TFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEM 188

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI------------------------ 493
              ++ SWN++IS Y   G VD A  +F+ M    +                        
Sbjct: 189 VVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFE 248

Query: 494 ---QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLK 549
                ++++WN +++G+  +  Y + + L R MQ   G  PN  ++  VL A   L  L 
Sbjct: 249 NMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALD 308

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G+  H +I RN ++  L++G +L DMY K  C+  A+ VF  M  R++++W+ +I G  
Sbjct: 309 LGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLA 368

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNV 668
             G    A     +M E+ ++P+ +S+  L++  +  G   + L     M    GI P +
Sbjct: 369 MYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKI 428

Query: 669 VTWTSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +  ++     +G L   +  ESL   + MQ     PN     +LL  C
Sbjct: 429 EHYGCVVDLLSRAGRL---DQAESLINSMPMQ-----PNVIVWGALLGGC 470



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 62/272 (22%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK--------------- 341
            T +LK C  L     G +VH  + K G + ++ ++ +L++ Y K               
Sbjct: 130 FTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMV 189

Query: 342 CRDVESANKL-----FSEVSD---------LEDDLL-WNEIIMVKLRNEKWENAIKLFRE 386
            RDV S N L     FS + D         +E +L+ W+ +I    R    E A +LF  
Sbjct: 190 VRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFEN 249

Query: 387 M-------------------QFSSAKAISR-------------TIVKMLQACAKVGAFHE 414
           M                   +++ A  + R             T+V +L ACA +GA   
Sbjct: 250 MPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDL 309

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           GK IH ++ ++ +E  L + N L  MY++   +  A  VF  M + ++ SW+ +I     
Sbjct: 310 GKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAM 369

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            GY + A++ F +M    ++P+ I++  LL+ 
Sbjct: 370 YGYANEAFNFFAEMIEDGLEPNDISFMGLLTA 401


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/633 (36%), Positives = 355/633 (56%), Gaps = 10/633 (1%)

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI----QPDIITWNCLL 504
            L+TR F     H L+    +I  Y+ LG +  A +LF+  +         P+    N +L
Sbjct: 48   LSTRGFLLHTPHFLAR---LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTML 104

Query: 505  SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
              +   G     + L   MQ +G   N  +   VL+         +G   HG ++R G  
Sbjct: 105  RAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFG 164

Query: 565  YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
             DL+V  +L+DMY K   + +A EVFD M  R++V W ++I+ Y      + A  +  +M
Sbjct: 165  SDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKM 224

Query: 625  EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
            +EE    D ++  S+ S     G  + A+     + +     N ++W S++SG  QN   
Sbjct: 225  QEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRP 284

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             ++L  F QMQ  +  PN  T   ++  C  LG    G+++H   + +    D  +   +
Sbjct: 285  TDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAI 344

Query: 745  IDMYSKSGNLKSAREVFRKS--ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            +DMY K G+L +A E+F       + ++SWN +I G+ ++G+GKEA+ LF  +   G +P
Sbjct: 345  MDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEP 404

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + ITFT++L+AC ++GL++EG K F  M T  ++ P ++HY+CMVD+LG+AG+L+EA+  
Sbjct: 405  NDITFTSILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRL 463

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I+ +P +P   +WGALL +CRIHG+ E  EIA+  LF+LEP ++  Y LM N+ A SN+W
Sbjct: 464  IKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKW 523

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            ++VE +R +M   G+K    +S I+    VH F       P   E+Y ++  L  EMK +
Sbjct: 524  KEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMV 583

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVPD  CV  D++ E+K  +L  H+EKLA+ +G+MK     PI+V KN RVCSDCH A 
Sbjct: 584  GYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAF 643

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K++S + GR+I +RDG RFHHF+ G CSC D W
Sbjct: 644  KFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/521 (22%), Positives = 220/521 (42%), Gaps = 89/521 (17%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD------ 260
           L+++K  H+ +   G + ++   +  LI  Y + GD  SA   F       +        
Sbjct: 38  LTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNS 97

Query: 261 --WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
              ++ L  Y +  G   E ++++  +   GV   +     +LK+C   +    G  VH 
Sbjct: 98  FLCNTMLRAYAN-AGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHG 156

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
            +++ GF  D+ ++ AL++ Y KC ++  A+++F  +  + D + W  +I +  + E+  
Sbjct: 157 QVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRML-IRDVVCWTAMITLYEQAERPL 215

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A+ LFR+MQ         T + +  A  ++G   +G+                      
Sbjct: 216 KALMLFRKMQEEGFLGDEITAISVASAVGQLG---DGRM--------------------- 251

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
                   +  A  VFD M++ N  SWNSM+S YT  G    A SLFN+M +S   P+ +
Sbjct: 252 -------AISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPV 304

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
           T                                     +++ A + L     GR+ H ++
Sbjct: 305 T-----------------------------------ALIMVSACSYLGSKHLGRKLHNFV 329

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN--MKNRNIVAWNSLISGYCFKGLFVN 616
           + + +D D  +  ++MDMY+K   L  A E+F+N  +  R++ +WN LISGY   G    
Sbjct: 330 ISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKE 389

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
           A ++ ++M+ E ++P+ +++ S++S  S  G   E       M    + P +  +  ++ 
Sbjct: 390 ALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVD 449

Query: 677 ----GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                   NE +R        +++   +P+     +LL  C
Sbjct: 450 MLGRAGFLNEAFR-------LIKKIPSRPSDEVWGALLLAC 483


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/628 (35%), Positives = 356/628 (56%), Gaps = 54/628 (8%)

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
             W+ ++  + +H       +    M+SL   PN      +L+A T L+  K     H   
Sbjct: 77   AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 559  LRNGLDYDLYVGTSLMDMYVK------------------NDCLQNAQEVFDNMKNRNIVA 600
            +R GLD DLY+  +L++ Y K                   DC++   +VFD M  R++V+
Sbjct: 137  VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVK---KVFDMMPVRDVVS 193

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSL---------------VSGYS 644
            WN++I+G+   G++V A  M+ +M +  ++KPD  + +S+               + GY+
Sbjct: 194  WNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYA 253

Query: 645  IWGQSK------EALVIIH--------HMKNSGIYP--NVVTWTSLISGSLQNENYRESL 688
            +            +L+ ++         ++   I P  + ++W S+I+G +QN  +   L
Sbjct: 254  VRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGL 313

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
             FF +M +E++KP + + SS++  C  L  L  G+++H   ++ GF  + ++A+ L+DMY
Sbjct: 314  GFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMY 373

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
            +K GN+K AR VF +   + + +W  +IMG A++G+  +A+ LF  +LE G +P  + F 
Sbjct: 374  AKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFM 433

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP- 867
            A+L AC ++GLV+EGW+YF+SM  D+ I P +EHY+ + DLLG+AG L+EA+DFI  M  
Sbjct: 434  AVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRG 493

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
             +P  ++W  LL +CR H  +E AE    +L  ++  N   Y LM N+ + + RW+D  R
Sbjct: 494  VQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAAR 553

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            LR  M + G+K     SWI++   VH F A    HP   +I   L  L+ +M+K GYV D
Sbjct: 554  LRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVID 613

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSL 1047
            T  V  D+DEE K ++L +H+E+LAI YG++ T +   IRVIKN RVC+DCHTA K+++ 
Sbjct: 614  TNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITK 673

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            + GREI +RD +RFHHF+ G CSC D W
Sbjct: 674  IVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 212/473 (44%), Gaps = 62/473 (13%)

Query: 261 WSSFLEDYESFGGEVQELLEV----WGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           WSS ++ Y S       LL +    +  +    V     +   +LK  T L    L   +
Sbjct: 78  WSSIIKCYTS-----HSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSL 132

Query: 317 HASLIKRGFDFDVHLKCALMNFY------GKCRDV-----ESANKLFSEVSDL---EDDL 362
           HA  ++ G D D+++  AL+N Y      GK  DV     ES      +V D+    D +
Sbjct: 133 HACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVV 192

Query: 363 LWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
            WN +I    +N  +  A+ + REM +    K  S T+  +L   A+    ++GK+IHGY
Sbjct: 193 SWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGY 252

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            +++  + ++ + + LI MY++ N+LE + R F  +   +  SWNS+I+           
Sbjct: 253 AVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIA----------- 301

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                               C+ +G F  G     L   R M     +P   S S V+ A
Sbjct: 302 -------------------GCVQNGEFDRG-----LGFFRRMLKENVKPMAVSFSSVIPA 337

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
              L  L  GR+ HG I+R G D + ++ +SL+DMY K   ++ A+ VFD +  R++VAW
Sbjct: 338 CAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAW 397

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-K 660
            ++I G    G  ++A  +   M E+ ++P  V++ ++++  S  G   E     + M +
Sbjct: 398 TAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMER 457

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + GI P +  + ++     +     E+  F   M+   ++P  +  S LL  C
Sbjct: 458 DFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMR--GVQPTGSVWSILLAAC 508



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/509 (22%), Positives = 199/509 (39%), Gaps = 104/509 (20%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W+ II     +     +   F  M+  S          +L+A   +        +H   +
Sbjct: 78  WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           +  L+S+L + N LI+ Y+   K   A +VFD             +    G   +D    
Sbjct: 138 RLGLDSDLYIANALINTYA---KFHNAGKVFD-------------VFPKRGESGIDCVKK 181

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAV 542
           +F+ M       D+++WN +++G   +G Y   L ++R M   G  +P+  ++S +L   
Sbjct: 182 VFDMMPVR----DVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIF 237

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            E   +  G+E HGY +RNG D D+++G+SL+DMY K + L+ +   F  +  ++ ++WN
Sbjct: 238 AEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWN 297

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------------------------- 636
           S+I+G    G F        +M +E +KP  VS+                          
Sbjct: 298 SIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRL 357

Query: 637 ---------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                    +SLV  Y+  G  K A  +   +       ++V WT++I G   + +  ++
Sbjct: 358 GFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKR----DMVAWTAIIMGCAMHGHALDA 413

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL--- 744
           +  F  M ++ ++P      ++L  C   GL+  G         N   +D  +A GL   
Sbjct: 414 VSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYF-----NSMERDFGIAPGLEHY 468

Query: 745 ---IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
               D+  ++G L+ A +                                       G Q
Sbjct: 469 AAVADLLGRAGRLEEAYDFISNM---------------------------------RGVQ 495

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSM 830
           P    ++ LLAAC+    VE   K  D +
Sbjct: 496 PTGSVWSILLAACRAHKSVELAEKVLDKL 524



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 130/260 (50%), Gaps = 3/260 (1%)

Query: 248 KAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF-RSRILTIILKLCTK 306
           K F +   R    W++ +  +   G  V E L++  E+   G +   S  L+ IL +  +
Sbjct: 181 KVFDMMPVRDVVSWNTVIAGFAQNGMYV-EALDMVREMGKNGKLKPDSFTLSSILPIFAE 239

Query: 307 LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNE 366
            +    G E+H   ++ GFD DV +  +L++ Y KC  +E + + F  +   +D + WN 
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFY-ILPRKDAISWNS 298

Query: 367 IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
           II   ++N +++  +  FR M   + K ++ +   ++ ACA + A   G+Q+HG +++  
Sbjct: 299 IIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLG 358

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
            + N  + + L+ MY++   +++A  VFD +   ++ +W ++I      G+   A SLF 
Sbjct: 359 FDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFE 418

Query: 487 KMNSSRIQPDIITWNCLLSG 506
            M    ++P  + +  +L+ 
Sbjct: 419 NMLEDGVRPCYVAFMAVLTA 438


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/650 (35%), Positives = 366/650 (56%), Gaps = 22/650 (3%)

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            + N+   N L+S Y +N +++ A +VFD M + N+ SW +++  Y   G VDVA SLF K
Sbjct: 76   DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            M     + + ++W  +L G    G   +   L    + +  + N +  S++     E R+
Sbjct: 136  MP----EKNKVSWTVMLIGFLQDGRIDDACKLY---EMIPDKDNIARTSMIHGLCKEGRV 188

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
                RE    I     +  +   T+++  Y +N+ + +A+++FD M  +  V+W S++ G
Sbjct: 189  -DEARE----IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
            Y   G   +A+++   M    +KP +++ N+++SG    G+  +A  +   MK      N
Sbjct: 244  YVQNGRIEDAEELFEVMP---VKP-VIACNAMISGLGQKGEIAKARRVFDSMKER----N 295

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
              +W ++I    +N    E+L  FI MQ++ ++P   T+ S+L  C  L  L +GK++H 
Sbjct: 296  DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              ++  F  D YVA+ L+ MY K G L  ++ +F +  +K +  WN +I G+A +G G+E
Sbjct: 356  QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415

Query: 788  AILLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            A+ +F E+  +G  +P+ +TF A L+AC  +G+VEEG K ++SM + + + P   HY+CM
Sbjct: 416  ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VD+LG+AG  +EA + I +M  +PDA +WG+LLG+CR H  L+ AE  +++L ++EP NS
Sbjct: 476  VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA-PHPAT 965
              Y L+ N+ A   RW DV  LR  M    V+     SW +++  VH F+  G   HP  
Sbjct: 536  GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQ 595

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
              I   L  L   +++ GY PD      D+DEEEK   L  H+E+LA+ Y L+K     P
Sbjct: 596  ESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIP 655

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IRV+KN RVCSDCHTA K +S V+ REI LRD  RFHHFR GECSC D W
Sbjct: 656  IRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 20/259 (7%)

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           S++  Y  N   ++A+++FD M +RNI++WN L+SGY   G    A+K+ + M E     
Sbjct: 53  SMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER---- 108

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           ++VSW +LV GY   G+   A  +   M       N V+WT ++ G LQ+    ++ K +
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLY 164

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             +  +D    +   +S++      G +   +EI     +   I    + TG    Y ++
Sbjct: 165 EMIPDKD----NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG----YGQN 216

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
             +  AR++F     KT  SW  M+MG+   G  ++A     EL E       I   A++
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA----EELFEVMPVKPVIACNAMI 272

Query: 812 AACKNSGLVEEGWKYFDSM 830
           +     G + +  + FDSM
Sbjct: 273 SGLGQKGEIAKARRVFDSM 291



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 18/294 (6%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           G+   A + F     R+ A W + ++ +E  G E+ E L+++  +  +GV      L  I
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL-EALDLFILMQKQGVRPTFPTLISI 337

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L +C  L +   G +VHA L++  FD DV++   LM  Y KC ++  +  +F      +D
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS-KD 396

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            ++WN II     +   E A+K+F EM  S S K    T V  L AC+  G   EG +I+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456

Query: 420 GYVLKSALESNLSV------CNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSY 472
                 ++ES   V        C++ M  R  +   A  + DSM  + + + W S++ + 
Sbjct: 457 -----ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQS 525
                +DVA     K+    I+P+      LLS  + + G + +V  L + M++
Sbjct: 512 RTHSQLDVAEFCAKKL--IEIEPENSGTYILLSNMYASQGRWADVAELRKLMKT 563



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 3/199 (1%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A+++  G+  ++  A ++F  + +  +D  W  +I +  RN     A+ LF  MQ    +
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKE-RNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T++ +L  CA + + H GKQ+H  +++   + ++ V + L++MY +  +L  +  +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-SSRIQPDIITWNCLLSGHFTHGS 512
           FD     ++  WNS+IS Y   G  + A  +F +M  S   +P+ +T+   LS     G 
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448

Query: 513 YQNVLTLLRGMQSL-GFRP 530
            +  L +   M+S+ G +P
Sbjct: 449 VEEGLKIYESMESVFGVKP 467


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/716 (33%), Positives = 378/716 (52%), Gaps = 76/716 (10%)

Query: 362  LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
            L+WN +      N     A+KL+  M        S +   +L++CAK  A  EG+QIHG+
Sbjct: 31   LIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGH 90

Query: 422  VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            VLK   + ++ V   LISMY++N +LE A +VFD     ++ S+ ++I+ Y   GY++ A
Sbjct: 91   VLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNA 150

Query: 482  WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
              LF++++      D+++WN ++SG+    +++  L L + M     +P+ S++  V+ A
Sbjct: 151  RKLFDEISVK----DVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSA 206

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
              +   ++ GR+ H +I  +G   ++ +   L+D+Y K   ++ A  +F  +  +++++W
Sbjct: 207  CAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISW 266

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            N+LI G+    L+                                   KEAL++   M  
Sbjct: 267  NTLIGGHTHMNLY-----------------------------------KEALLLFQEMLR 291

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
            SG  PN V                                   TM S+L  C  LG +  
Sbjct: 292  SGESPNDV-----------------------------------TMLSVLPACAHLGAIDI 316

Query: 722  GKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
            G+ IH    K   G    + + T LIDMY+K G++++A++VF     ++L+SWN MI GF
Sbjct: 317  GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 376

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A++G    A  LF ++ + G  PD ITF  LL+AC +SG+++ G   F SMS DY I P 
Sbjct: 377  AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPK 436

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            +EHY CM+DLLG  G   EA + IRTMP +PD  IW +LL +C++H ++E  E  ++ L 
Sbjct: 437  LEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLI 496

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            K+EP N  +Y L+ N+ A + RW+ V ++R  +++ G+K     S I+ID +VH F    
Sbjct: 497  KIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGD 556

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP   EIY  L  +   M++ G+VPDT  V Q+++EE K   L  H+EKLAI +GL+ 
Sbjct: 557  KFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 616

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            TK    + ++KN RVC +CH A K +S +  REI  RD  R H  ++G  SC+D W
Sbjct: 617  TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 140/277 (50%), Gaps = 4/277 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y   G   +A K F     +    W++ +  Y       +E LE++ ++    V 
Sbjct: 136 ALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVE-TCNFKEALELYKDMMKTNVK 194

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  ++  C +  +  LG ++H+ +   GF  ++ +   L++ Y KC +VE+A  L
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  ++  +D + WN +I        ++ A+ LF+EM  S       T++ +L ACA +GA
Sbjct: 255 FQGLAK-KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313

Query: 412 FHEGKQIHGYVLK--SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
              G+ IH Y+ K    + +  S+   LI MY++   +E A +VFDSM   +LSSWN+MI
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             +   G  + A+ LF+KM  + I PD IT+  LLS 
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSA 410



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 165/373 (44%), Gaps = 72/373 (19%)

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW---- 636
           D L  A  +F+ ++  N++ WN++  G+      V A K+   M    + P+  S+    
Sbjct: 13  DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72

Query: 637 -------------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
                                           SL+S Y+  G+ ++A    H + +   +
Sbjct: 73  KSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDA----HKVFDRSSH 128

Query: 666 PNVVTWTSL-------------------------------ISGSLQNENYRESLKFFIQM 694
            +VV++T+L                               ISG ++  N++E+L+ +  M
Sbjct: 129 RHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDM 188

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
            + ++KP+ +TM +++  C   G ++ G+++H     +GF  +  +   LID+YSK G +
Sbjct: 189 MKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEV 248

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           ++A  +F+  A K + SWN +I G       KEA+LLF E+L +G  P+ +T  ++L AC
Sbjct: 249 ETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 308

Query: 815 KNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            + G ++ G W +         +       + ++D+  K G ++ A     +M  +  ++
Sbjct: 309 AHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS 368

Query: 874 IWGALLGSCRIHG 886
            W A++    +HG
Sbjct: 369 -WNAMIFGFAMHG 380


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 278/952 (29%), Positives = 462/952 (48%), Gaps = 57/952 (5%)

Query: 151  TRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFC-FLNETNKFRCLSS 209
            TR  + + +    P S +   TS     TD L      S  +S F   +++  +   L+ 
Sbjct: 2    TRRFLGRRKPRIDPVSFS---TSAPQHRTDELKYFDDGSADASTFAALIHKCARLHDLAQ 58

Query: 210  VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
             +  H  +++ G I   D +   L+  Y + G    A   F     +S   W+S +    
Sbjct: 59   GRRIHGLILRNG-IEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLI-GVN 116

Query: 270  SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG-FDFD 328
            +  G  +E   ++ E+  +GV+        +L  C      W    + A +   G  + D
Sbjct: 117  ARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHP---WEVDTIRARVEACGSLELD 173

Query: 329  VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
            V +  A+MN YGKC D++SA  +F  +  + D  +WN +I + + +E+ + A++LFR+M+
Sbjct: 174  VIVATAVMNAYGKCGDLDSAWGVFDGIL-VRDAAVWNAMISLLVAHEQGDEALELFRQMR 232

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                     T V  L AC     F E  +IH +  + A +++  V   L++MY +  K++
Sbjct: 233  LGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVD 292

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-----SSRIQPDIITWNCL 503
             A  +F+ +++ ++ SWN+M+++    G+ D A+  F +M       SRI    I   C 
Sbjct: 293  DAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACF 352

Query: 504  LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL---------------QAVTELRLL 548
            L+ H  HG +   L +  G           SV VV+                A +   LL
Sbjct: 353  LAAHLKHGDFVKTLAVEGGCGI-------ESVDVVMGTAIMNMYSRCKSPKSAFSSSLLL 405

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM----KNRNIVAWNSL 604
            +  R+    ++ N          +++ +YV+N+  + A  +F  M       + V+  ++
Sbjct: 406  EQDRDQPSIMMWN----------TVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTV 455

Query: 605  ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
             +           K + + + E E+       N+LV+ Y+  G  ++A  I   M     
Sbjct: 456  FNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTR-- 513

Query: 665  YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
              NV++WT+++    Q    RE+L+ F  +  E + PN  T +++L  CG L  +   K 
Sbjct: 514  --NVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKL 571

Query: 725  IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            +     + GF  +  VA GL+    K G+L+     F+  A K   SWN  I   A +GN
Sbjct: 572  VQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGN 631

Query: 785  GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
            G   + LF  +   G    ++T   +L++C ++GLV +G+ YF +M  DY      EHYS
Sbjct: 632  GVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYS 691

Query: 845  CMVDLLGKAGYLDEAWDFIRTMPFKPDATI-WGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            C++DLL +AG+L+ A +F++ +PF   +   W  LL  C++HG LE    A++R+  L P
Sbjct: 692  CVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNP 751

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             ++  Y +M NL A + +W +   +R SM E+G K     SWI++   +H F      HP
Sbjct: 752  GSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHP 811

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
             + EI+ EL  L  EMK+ G+V D + V  D+  +EK  +L  H+EKLAI +GL+ T + 
Sbjct: 812  RSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAG 871

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             P+R++KN RVCSDCH+A K++S + GREI +RD  RFHHFR G CSC D W
Sbjct: 872  EPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 257/809 (31%), Positives = 408/809 (50%), Gaps = 78/809 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+LC    A   G  VH+ + K      V L  AL++ + +  D+  A  +F ++++  
Sbjct: 100  LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAE-R 158

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D   WN ++    +   ++ A+ L+  M +   +    T   +L+ C  +     G+++H
Sbjct: 159  DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             +V++   ES++ V N LI+MY +   +  A  VFD M                      
Sbjct: 219  LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMP--------------------- 257

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                          + D I+WN ++SG+F +      L L   M+     P+  +++ V+
Sbjct: 258  --------------RRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVI 303

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A   L   + GRE HGY+++ G   ++ V  SL+ M+    C   A+ VF  M+ +++V
Sbjct: 304  SACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLV 363

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--------------------------- 632
            +W ++ISGY   GL   A +    ME E + PD                           
Sbjct: 364  SWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFA 423

Query: 633  --------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                    ++  NSL+  YS      +AL + H + N     NV++WTS+I G   N   
Sbjct: 424  DRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK----NVISWTSIILGLRLNYRS 479

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L FF QM    +KPNS T+ S+L  C  +G L  GKEIH   L+ G   D ++   L
Sbjct: 480  FEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL 538

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMY + G ++ A   F  S  K +ASWN ++ G+A  G G  A+ LFH+++E+   PD 
Sbjct: 539  LDMYVRCGRMEPAWNQF-NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDE 597

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            ITFT+LL AC  SG+V +G +YF+SM   ++I P ++HY+ +VDLLG+AG L++A++FI+
Sbjct: 598  ITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIK 657

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP  PD  IWGALL +CRI+ ++E  E+A++ +F+++  +   Y L+ NL A S +W++
Sbjct: 658  KMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDE 717

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V R+R  M E  +      SW+++   VH F      HP   EI   L     +M+  G 
Sbjct: 718  VARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGL 777

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
                     DID   K ++   H+E+LAI +GL+ T    PI V KN  +C +CH   K+
Sbjct: 778  SMSKDSRRDDID-ASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKF 836

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCND 1073
            +S V  R I +RD  +FHHF++G CSC D
Sbjct: 837  ISKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 166/633 (26%), Positives = 273/633 (43%), Gaps = 117/633 (18%)

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N +I+        E A+     MQ         T + +L+ C    A  EG ++H YV K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           +     + + N L+SM+ R   L  A  VF  M + +L SWN ++  Y   GY D A +L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           +++M    I+PD+ T+ C+L                   ++ G  P+             
Sbjct: 183 YHRMLWVGIRPDVYTFPCVL-------------------RTCGGLPD------------- 210

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
              L  GRE H +++R G + D+ V  +L+ MYVK   + +A+ VFD M  R+ ++WN++
Sbjct: 211 ---LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAM 267

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS-----------KEAL 653
           ISGY    + +   ++   M E  + PDL++  S++S     G             K   
Sbjct: 268 ISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGF 327

Query: 654 VIIHHMKNSGI--------------------YPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           V    + NS I                    + ++V+WT++ISG  +N    ++++ +  
Sbjct: 328 VAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTI 387

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M+ E + P+  T++S+L  C GLGLL  G  +H    + G      VA  LIDMYSK   
Sbjct: 388 MEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRC 447

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           +  A EVF +  NK + SW  +I+G  +     EA+  F +++    +P+++T  ++L+A
Sbjct: 448 IDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSA 506

Query: 814 CK-----------------------------------NSGLVEEGWKYFDSMSTD---YN 835
           C                                      G +E  W  F+S   D   +N
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWN 566

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH----LEYA 891
           I+ T   Y+      GK G   E +  +      PD   + +LL +C   G     LEY 
Sbjct: 567 ILLT--GYAQQ----GKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYF 620

Query: 892 EIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
           E    + F + P N  +Y  +++LL  + R ED
Sbjct: 621 ESMEHK-FHIAP-NLKHYASVVDLLGRAGRLED 651



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 245/590 (41%), Gaps = 80/590 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  ++ FGD   A   F     R    W+  +  Y    G   E L ++  +   G+ 
Sbjct: 134 ALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK-AGYFDEALNLYHRMLWVGIR 192

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L+ C  L     G EVH  +I+ GF+ DV +  AL+  Y KC D+ SA  +
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +    D + WN +I     N+     ++LF  M+         T+  ++ AC  +G 
Sbjct: 253 FDRMPR-RDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGD 311

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+++HGYV+K+   + +SV N LI M+S     + A  VF  M+  +L SW +MIS 
Sbjct: 312 ERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y   G  + A   +  M    + PD IT                                
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEIT-------------------------------- 399

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              ++ VL A   L LL  G   H +  R GL   + V  SL+DMY K  C+  A EVF 
Sbjct: 400 ---IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFH 456

Query: 592 NMKNRNIVAWNSLISGY-----CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS----- 641
            + N+N+++W S+I G       F+ LF   + +L+      +KP+ V+  S++S     
Sbjct: 457 RIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS------LKPNSVTLVSVLSACARI 510

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPN-------------------------VVTWTSLIS 676
           G    G+   A  +   +   G  PN                         V +W  L++
Sbjct: 511 GALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLT 570

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFI 735
           G  Q      +++ F +M + D+ P+  T +SLL  C   G++ +G E    +  K    
Sbjct: 571 GYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIA 630

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGN 784
            +      ++D+  ++G L+ A E  +K   +   A W  ++    IY N
Sbjct: 631 PNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQN 680



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 236/521 (45%), Gaps = 48/521 (9%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYF 254
           C L        L+  +  H  +I+ G  + SD D+V +LI  Y++ GD  SA   F    
Sbjct: 200 CVLRTCGGLPDLARGREVHLHVIRYG--FESDVDVVNALITMYVKCGDIFSARLVFDRMP 257

Query: 255 SRSYADWSSFLEDYESFGGEV-QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLG 313
            R    W++ +  Y  F  +V  E L ++  +    V      +T ++  C  L    LG
Sbjct: 258 RRDRISWNAMISGY--FENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            EVH  +IK GF  +V +  +L+  +      + A  +FS++ + +D + W  +I    +
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM-EFKDLVSWTAMISGYEK 374

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N   E A++ +  M+         TI  +L ACA +G   +G  +H +  ++ L S + V
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N LI MYS+   ++ A  VF  + + N+ SW S+I                        
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII------------------------ 470

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
                     L     + S++ +    + + SL  +PN  ++  VL A   +  L  G+E
Sbjct: 471 ----------LGLRLNYRSFEALFFFQQMILSL--KPNSVTLVSVLSACARIGALSCGKE 518

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H + LR GL +D ++  +L+DMYV+   ++ A   F++ + +++ +WN L++GY  +G 
Sbjct: 519 IHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGK 577

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A ++ ++M E ++ PD +++ SL+   S  G   + L     M++   I PN+  + 
Sbjct: 578 GGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYA 637

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           S++    +     ++ +F  +M    I P+     +LL  C
Sbjct: 638 SVVDLLGRAGRLEDAYEFIKKMP---IDPDPAIWGALLNAC 675


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Brachypodium distachyon]
          Length = 808

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/714 (33%), Positives = 368/714 (51%), Gaps = 80/714 (11%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L+AC+ +      + +H +  ++ L ++L V   L+ +Y++      A  VF  M    
Sbjct: 135  VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR- 193

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                              D++ WN +L+G+  HG Y + +  L 
Sbjct: 194  ----------------------------------DVVAWNAMLAGYALHGKYSDTIACLL 219

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD----LYVGTSLMDMY 577
             MQ     PN S++  +L  + +   L  GR  H Y +R    +D    + VGT+L+DMY
Sbjct: 220  LMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMY 278

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA----KKMLNQ---------- 623
             K   L  A  VF+ M  RN V W++L+ G+   G  + A    K ML Q          
Sbjct: 279  AKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSV 338

Query: 624  ----------------------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
                                  + +  +  DL + NSL+S Y+  G   +A  +   M  
Sbjct: 339  ASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM-- 396

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
              +  + V++++L+SG +QN    E+ + F +MQ  +++P+  TM SL+  C  L  LQ+
Sbjct: 397  --VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQH 454

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            GK  H   +  G   +  +   LIDMY+K G +  +R++F     + + SWN MI G+ I
Sbjct: 455  GKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGI 514

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G GKEA  LF ++     +PD +TF  L++AC +SGLV EG ++F  M+  Y I P +E
Sbjct: 515  HGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRME 574

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY  MVDLL + G+LDEA+ FI+ MP K D  +WGALLG+CR+H +++  +  S  + +L
Sbjct: 575  HYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQL 634

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
             P  + N+ L+ N+ + + R+++   +R    E G K     SWI+I+  +H F      
Sbjct: 635  GPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRS 694

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
            H  + EIY EL +++ ++ KLGY  DT  V QD++EEEK K LL H+EKLAI +G++   
Sbjct: 695  HAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLS 754

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                I V KN RVC DCHT  KYM+LVR R I +RD  RFHHF+ G+CSC D W
Sbjct: 755  EDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/540 (22%), Positives = 230/540 (42%), Gaps = 76/540 (14%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C+ L+       VH    + G   D+ +  AL++ Y KC     A  +F  +    
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP-AR 193

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + WN ++     + K+ + I     MQ   A   S T+V +L   A+ GA  +G+ +H
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNAS-TLVALLPLLAQHGALSQGRAVH 252

Query: 420 GYVLKSAL----ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            Y +++      +  + V   L+ MY++   L  A+RVF++M   N  +W++++  +   
Sbjct: 253 AYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G +  A+SLF  M +  +        C LS                           +SV
Sbjct: 313 GRMLEAFSLFKDMLAQGL--------CFLS--------------------------PTSV 338

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           +  L+A   L  L  G++ H  + ++GL  DL  G SL+ MY K   +  A  +FD M  
Sbjct: 339 ASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVV 398

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSK 650
           ++ V++++L+SGY   G    A ++  +M+   ++PD+ +  SL+   S       G+  
Sbjct: 399 KDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCG 458

Query: 651 EALVIIHHMKNS------------------------GIYP--NVVTWTSLISGSLQNENY 684
              VI+  + +                          + P  ++V+W ++I+G   +   
Sbjct: 459 HGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLG 518

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATG 743
           +E+   F+ M+ +  +P+  T   L+  C   GL+  GK   H +  K G         G
Sbjct: 519 KEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIG 578

Query: 744 LIDMYSKSGNLKSAREVFRKSANKT-LASWNCMIMGFAIYGN---GKEAILLFHELLETG 799
           ++D+ ++ G L  A +  +    K  +  W  ++    ++ N   GK+   +  +L   G
Sbjct: 579 MVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEG 638



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 157/304 (51%), Gaps = 6/304 (1%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMV---KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           LS  ++ HA  ++   + +  D V    +L+  Y + G    A++ F     R+   WS+
Sbjct: 245 LSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSA 304

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIK 322
            +  +    G + E   ++ ++  +G+ F S   +   L+ C  L    LG ++HA L K
Sbjct: 305 LVGGF-VLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAK 363

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
            G   D+    +L++ Y K   ++ A  LF ++  ++D + ++ ++   ++N K + A +
Sbjct: 364 SGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV-VKDTVSYSALVSGYVQNGKADEAFR 422

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           +FR+MQ  + +    T+V ++ AC+ + A   GK  HG V+   + S  S+CN LI MY+
Sbjct: 423 VFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYA 482

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +  +++L+ ++FD M   ++ SWN+MI+ Y   G    A +LF  M     +PD +T+ C
Sbjct: 483 KCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFIC 542

Query: 503 LLSG 506
           L+S 
Sbjct: 543 LISA 546



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 5/184 (2%)

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           +PN+ T   +L+ C  L  L++ + +HC   + G   D +V+T L+D+Y+K  + + A  
Sbjct: 126 QPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAAT 185

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VFR+   + + +WN M+ G+A++G   + I     L++    P+A T  ALL      G 
Sbjct: 186 VFRRMPARDVVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGA 244

Query: 820 VEEG---WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
           + +G     Y     + ++    +   + ++D+  K G+L  A      M  + + T W 
Sbjct: 245 LSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT-WS 303

Query: 877 ALLG 880
           AL+G
Sbjct: 304 ALVG 307


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 257/809 (31%), Positives = 408/809 (50%), Gaps = 78/809 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+LC    A   G  VH+ + K      V L  AL++ + +  D+  A  +F ++++  
Sbjct: 100  LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAE-R 158

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D   WN ++    +   ++ A+ L+  M +   +    T   +L+ C  +     G+++H
Sbjct: 159  DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             +V++   ES++ V N LI+MY +   +  A  VFD M                      
Sbjct: 219  LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMP--------------------- 257

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                          + D I+WN ++SG+F +      L L   M+     P+  +++ V+
Sbjct: 258  --------------RRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVI 303

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A   L   + GRE HGY+++ G   ++ V  SL+ M+    C   A+ VF  M+ +++V
Sbjct: 304  SACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLV 363

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--------------------------- 632
            +W ++ISGY   GL   A +    ME E + PD                           
Sbjct: 364  SWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFA 423

Query: 633  --------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                    ++  NSL+  YS      +AL + H + N     NV++WTS+I G   N   
Sbjct: 424  DRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK----NVISWTSIILGLRLNYRS 479

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L FF QM    +KPNS T+ S+L  C  +G L  GKEIH   L+ G   D ++   L
Sbjct: 480  FEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL 538

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMY + G ++ A   F  S  K +ASWN ++ G+A  G G  A+ LFH+++E+   PD 
Sbjct: 539  LDMYVRCGRMEPAWNQF-NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDE 597

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            ITFT+LL AC  SG+V +G +YF+SM   ++I P ++HY+ +VDLLG+AG L++A++FI+
Sbjct: 598  ITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIK 657

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP  PD  IWGALL +CRI+ ++E  E+A++ +F+++  +   Y L+ NL A S +W++
Sbjct: 658  KMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDE 717

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V R+R  M E  +      SW+++   VH F      HP   EI   L     +M+  G 
Sbjct: 718  VARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGL 777

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
                     DID   K ++   H+E+LAI +GL+ T    PI V KN  +C +CH   K+
Sbjct: 778  SMSKDSRRDDID-ASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKF 836

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCND 1073
            +S V  R I +RD  +FHHF++G CSC D
Sbjct: 837  ISKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  207 bits (526), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 273/633 (43%), Gaps = 117/633 (18%)

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N +I+        E A+     MQ         T + +L+ C    A  EG ++H YV K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           +     + + N L+SM+ R   L  A  VF  M + +L SWN ++  Y   GY D A +L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           +++M    I+PD+ T+ C+L                   ++ G  P+             
Sbjct: 183 YHRMLWVGIRPDVYTFPCVL-------------------RTCGGLPD------------- 210

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
              L  GRE H +++R G + D+ V  +L+ MYVK   + +A+ VFD M  R+ ++WN++
Sbjct: 211 ---LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAM 267

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           ISGY    + +   ++   M E  + PDL++  S++S     G  +    +  ++  +G 
Sbjct: 268 ISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGF 327

Query: 665 -------------------------------YPNVVTWTSLISGSLQNENYRESLKFFIQ 693
                                          + ++V+WT++ISG  +N    ++++ +  
Sbjct: 328 VAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTI 387

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M+ E + P+  T++S+L  C GLGLL  G  +H    + G      VA  LIDMYSK   
Sbjct: 388 MEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRC 447

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           +  A EVF +  NK + SW  +I+G  +     EA+  F +++    +P+++T  ++L+A
Sbjct: 448 IDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSA 506

Query: 814 CK-----------------------------------NSGLVEEGWKYFDSMSTD---YN 835
           C                                      G +E  W  F+S   D   +N
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWN 566

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH----LEYA 891
           I+ T   Y+      GK G   E +  +      PD   + +LL +C   G     LEY 
Sbjct: 567 ILLT--GYAQQ----GKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYF 620

Query: 892 EIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
           E    + F + P N  +Y  +++LL  + R ED
Sbjct: 621 ESMEHK-FHIAP-NLKHYASVVDLLGRAGRLED 651



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 245/590 (41%), Gaps = 80/590 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  ++ FGD   A   F     R    W+  +  Y    G   E L ++  +   G+ 
Sbjct: 134 ALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK-AGYFDEALNLYHRMLWVGIR 192

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L+ C  L     G EVH  +I+ GF+ DV +  AL+  Y KC D+ SA  +
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +    D + WN +I     N+     ++LF  M+         T+  ++ AC  +G 
Sbjct: 253 FDRMPR-RDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGD 311

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+++HGYV+K+   + +SV N LI M+S     + A  VF  M+  +L SW +MIS 
Sbjct: 312 ERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y   G  + A   +  M    + PD IT                                
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEIT-------------------------------- 399

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              ++ VL A   L LL  G   H +  R GL   + V  SL+DMY K  C+  A EVF 
Sbjct: 400 ---IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFH 456

Query: 592 NMKNRNIVAWNSLISGY-----CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS----- 641
            + N+N+++W S+I G       F+ LF   + +L+      +KP+ V+  S++S     
Sbjct: 457 RIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS------LKPNSVTLVSVLSACARI 510

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPN-------------------------VVTWTSLIS 676
           G    G+   A  +   +   G  PN                         V +W  L++
Sbjct: 511 GALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLT 570

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFI 735
           G  Q      +++ F +M + D+ P+  T +SLL  C   G++ +G E    +  K    
Sbjct: 571 GYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIA 630

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGN 784
            +      ++D+  ++G L+ A E  +K   +   A W  ++    IY N
Sbjct: 631 PNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQN 680



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 235/529 (44%), Gaps = 64/529 (12%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYF 254
           C L        L+  +  H  +I+ G  + SD D+V +LI  Y++ GD  SA   F    
Sbjct: 200 CVLRTCGGLPDLARGREVHLHVIRYG--FESDVDVVNALITMYVKCGDIFSARLVFDRMP 257

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSR---------ILTIILKLCT 305
            R    W++ +  Y  F  +V         L G  + F  R          +T ++  C 
Sbjct: 258 RRDRISWNAMISGY--FENDVC--------LEGLRLFFMMREFFVDPDLMTMTSVISACE 307

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
            L    LG EVH  +IK GF  +V +  +L+  +      + A  +FS++ + +D + W 
Sbjct: 308 ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM-EFKDLVSWT 366

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I    +N   E A++ +  M+         TI  +L ACA +G   +G  +H +  ++
Sbjct: 367 AMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRT 426

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
            L S + V N LI MYS+   ++ A  VF  + + N+ SW S+I                
Sbjct: 427 GLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII---------------- 470

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
                             L     + S++ +    + + SL  +PN  ++  VL A   +
Sbjct: 471 ------------------LGLRLNYRSFEALFFFQQMILSL--KPNSVTLVSVLSACARI 510

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
             L  G+E H + LR GL +D ++  +L+DMYV+   ++ A   F++ + +++ +WN L+
Sbjct: 511 GALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILL 569

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GI 664
           +GY  +G    A ++ ++M E ++ PD +++ SL+   S  G   + L     M++   I
Sbjct: 570 TGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHI 629

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            PN+  + S++    +     ++ +F  +M    I P+     +LL  C
Sbjct: 630 APNLKHYASVVDLLGRAGRLEDAYEFIKKMP---IDPDPAIWGALLNAC 675


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/725 (32%), Positives = 375/725 (51%), Gaps = 73/725 (10%)

Query: 418  IHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H  +L++    S   + N L++ Y+ +  L  A RVFD+M   NL + NS++S+    G
Sbjct: 32   VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSG----HFTHGSYQNVLTLLRGMQSLGFRPNG 532
             V     LF  +     Q D +++N LL+G         +    + LLR     G RP+ 
Sbjct: 92   LVRDMERLFTSLP----QRDAVSYNALLAGFSRAGAHARAAGAYVALLR--DEAGVRPSR 145

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             ++S V+   + L     GR+ H  ILR G     + G+ L+DMY K   + +A+ VFD 
Sbjct: 146  ITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDE 205

Query: 593  MKNRNIV-------------------------------AWNSLISGYCFKGLFVNAKKML 621
            M+ +N+V                                W ++++G    GL   A  + 
Sbjct: 206  MEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVF 265

Query: 622  NQMEEEEIKPDLVSWNSLVSGYSIWGQSKE---------------------ALVIIHHMK 660
             +M  E +  D  ++ S+++        +E                     ALV ++   
Sbjct: 266  RRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKC 325

Query: 661  NS----------GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
             S           ++ N+++WT++I G  QN    E+++ F +MQ++ IKP+  T+ S++
Sbjct: 326  RSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVI 385

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
             +C  L  L+ G + HCL L +G      V+  L+ +Y K G+++ A  +F + +     
Sbjct: 386  SSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV 445

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            SW  ++MG+A +G  KE I LF ++L  G +PD +TF  +L+AC  SGLV++G  YF SM
Sbjct: 446  SWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSM 505

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
              D++I+P  +HY+CM+DL  ++G+L +A +FI+ MP  PDA  W  LL +CR+ G +E 
Sbjct: 506  QQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEI 565

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             + A+  L KL+P N A+Y L+ ++ A    W DV +LR  M +  VK     SWI+   
Sbjct: 566  GKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKN 625

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             VH+FSA+   HP +  IY +L  L S+M + GY PD   V  D+ + EK  +L  H+EK
Sbjct: 626  KVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEK 685

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LAI +GL+      PIR++KN RVC DCH A K++S + GR+I +RD  RFH F  G CS
Sbjct: 686  LAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICS 745

Query: 1071 CNDCW 1075
            C D W
Sbjct: 746  CGDFW 750



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 188/398 (47%), Gaps = 36/398 (9%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+  ++   + +G    G+Q+H  +L+    +     + L+ MY++   +  A RVFD M
Sbjct: 147 TMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEM 206

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
           +  N+   N+MI+       V  A +LF  +     + D ITW  +++G   +G     L
Sbjct: 207 EGKNVVMCNTMITGLLRCKMVAEARALFEAIE----ERDSITWTTMVTGLTQNGLESEAL 262

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
            + R M++ G   +  +   +L A   L  L+ G++ H YI R   + +++VG++L+DMY
Sbjct: 263 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMY 322

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            K   ++ A+ VF  M  +NI++W ++I GY   G    A ++ ++M+ + IKPD  +  
Sbjct: 323 SKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLG 382

Query: 638 S---------------------LVSGYSIWGQSKEALVII----------HHMKNSGIYP 666
           S                     LVSG   +     ALV +          H + +   + 
Sbjct: 383 SVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFH 442

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-I 725
           + V+WT+L+ G  Q    +E++  F +M  + +KP+  T   +L  C   GL+  G+   
Sbjct: 443 DQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYF 502

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
           H +   +  +      T +ID+YS+SG LK A E  ++
Sbjct: 503 HSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQ 540



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 194/463 (41%), Gaps = 72/463 (15%)

Query: 294 SRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK----------- 341
           SRI ++ ++ + + L    LG +VH  +++ GF         L++ Y K           
Sbjct: 144 SRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVF 203

Query: 342 --------------------CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
                               C+ V  A  LF  + +  D + W  ++    +N     A+
Sbjct: 204 DEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEE-RDSITWTTMVTGLTQNGLESEAL 262

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            +FR M+         T   +L AC  + A  EGKQIH Y+ ++  E N+ V + L+ MY
Sbjct: 263 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMY 322

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           S+   + LA  VF  M   N+ SW +MI  Y   G  + A  +F++M    I+PD     
Sbjct: 323 SKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPD----- 377

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
                 FT GS                         V+ +   L  L+ G + H   L +
Sbjct: 378 -----DFTLGS-------------------------VISSCANLASLEEGAQFHCLALVS 407

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
           GL   + V  +L+ +Y K   +++A  +FD M   + V+W +L+ GY   G       + 
Sbjct: 408 GLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLF 467

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQ 680
            +M  + +KPD V++  ++S  S  G   +     H M ++  I P    +T +I    +
Sbjct: 468 EKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSR 527

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           +   +++ +F  QM +    P++   ++LL  C   G ++ GK
Sbjct: 528 SGWLKQAEEFIKQMPR---CPDAFGWATLLSACRLRGDMEIGK 567



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 162/372 (43%), Gaps = 38/372 (10%)

Query: 243 FTSAAKAFFLYFS-RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIIL 301
             + A+A F     R    W++ +      G E  E L+V+  +  +GV         IL
Sbjct: 226 MVAEARALFEAIEERDSITWTTMVTGLTQNGLE-SEALDVFRRMRAEGVGIDQYTFGSIL 284

Query: 302 KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
             C  L A   G ++HA + +  ++ +V +  AL++ Y KCR V  A  +F  +   ++ 
Sbjct: 285 TACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMM-WKNI 343

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           + W  +I+   +N   E A+++F EMQ    K    T+  ++ +CA + +  EG Q H  
Sbjct: 344 ISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 403

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            L S L   ++V N L+++Y +   +E A R+FD M  H+  SW +++  Y   G     
Sbjct: 404 ALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKET 463

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             LF KM S  ++PD +T+  +LS     G      +    MQ                 
Sbjct: 464 IDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQ----------------- 506

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM-KNRNIVA 600
                      + H  +    LD D Y  T ++D+Y ++  L+ A+E    M +  +   
Sbjct: 507 -----------QDHDIV---PLD-DHY--TCMIDLYSRSGWLKQAEEFIKQMPRCPDAFG 549

Query: 601 WNSLISGYCFKG 612
           W +L+S    +G
Sbjct: 550 WATLLSACRLRG 561


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
            mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/648 (36%), Positives = 353/648 (54%), Gaps = 52/648 (8%)

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL-GYVDVAWSLFNK 487
            S++   N  I+ + R   LE A  VF+ M      +WN+M+S YT + G V  A  LF+K
Sbjct: 71   SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            +     +PD +++N +L                                     V  LR 
Sbjct: 131  IP----EPDSVSYNIML-------------------------------------VCYLR- 148

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
              YG E+           D+    +L+  + +N  +Q A ++F  M  +N V+W+++ISG
Sbjct: 149  -SYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISG 207

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
            Y   G    A+++   +  + +    V   ++++GY  +G+ + A  I   M       N
Sbjct: 208  YVEHGDLEAAEELYKNVGMKSV----VVETAMLTGYMKFGKVELAERIFQRMA----VKN 259

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +VTW S+I+G ++N    + LK F  M +  ++PN  ++SS+L  C  L  L  G+++H 
Sbjct: 260  LVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQ 319

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            L  K+   KD    T LI MY K G+L SA ++F +   K + SWN MI G+A +G G++
Sbjct: 320  LVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRK 379

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF ++     +PD ITF A++ AC ++G V+ G +YF SM  ++ I     HY+C++
Sbjct: 380  ALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVI 439

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG LDEA   I+ MPFKP A I+G LLG+CRIH +L+ AE A+R L  L+P ++ 
Sbjct: 440  DLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSAT 499

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y  + N+ A +N+W+ V ++R  M E  V  +  +SWI+I  + H F +    HP    
Sbjct: 500  GYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTS 559

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I+ +L  L  +MK  GYVPD      D++EE K K+LL H+EKLAI +GLMKT    PIR
Sbjct: 560  IHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIR 619

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V KN RVC DCH A K++S +  REI +RD  RFHHFR G CSC D W
Sbjct: 620  VFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/482 (22%), Positives = 194/482 (40%), Gaps = 89/482 (18%)

Query: 234 IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFR 293
           I  ++   D  SA   F     R+   W++ L  Y    G+V+E  E++ ++     +  
Sbjct: 80  IASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSV-- 137

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
                                            +++ L C L + YG    VE+A   F+
Sbjct: 138 --------------------------------SYNIMLVCYLRS-YG----VEAALAFFN 160

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           ++  ++D   WN +I    +N + + A  LF  M   +  + S     M+    + G   
Sbjct: 161 KMP-VKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWS----AMISGYVEHGDLE 215

Query: 414 EGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             ++++  V +KS +     V   +++ Y +  K+ELA R+F  M   NL +WNSMI+ Y
Sbjct: 216 AAEELYKNVGMKSVV-----VETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGY 270

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                 +    +F  M  SR++                                   PN 
Sbjct: 271 VENCRAEDGLKVFKTMIESRVR-----------------------------------PNP 295

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            S+S VL   + L  L  GR+ H  + ++ L  D    TSL+ MY K   L +A ++F  
Sbjct: 296 LSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLE 355

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           M  +++++WN++ISGY   G    A  + ++M    +KPD +++ +++   +  G     
Sbjct: 356 MPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLG 415

Query: 653 LVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           +     MK   GI    V +T +I    +     E++    +M     KP++    +LL 
Sbjct: 416 VQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP---FKPHAAIYGTLLG 472

Query: 712 TC 713
            C
Sbjct: 473 AC 474



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 3/227 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y++FG    A + F     ++   W+S +  Y       ++ L+V+  +    V 
Sbjct: 234 AMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE-NCRAEDGLKVFKTMIESRVR 292

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L+ +L  C+ L A  LG ++H  + K     D     +L++ Y KC D++SA KL
Sbjct: 293 PNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKL 352

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+   +D + WN +I    ++     A+ LF +M+  + K    T V ++ AC   G 
Sbjct: 353 FLEMPR-KDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGF 411

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
              G Q    + K   +E+      C+I +  R  +L+ A  +   M
Sbjct: 412 VDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 235/672 (34%), Positives = 362/672 (53%), Gaps = 79/672 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F  +     +P+++ WN +  GH       + L L   M SLG  PN
Sbjct: 35   FDGLPY---AISVFETIQ----EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPN 87

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L++  + +  + G++ HG++L+ G D DLYV TSL+ MYV+N  L++A++VFD
Sbjct: 88   CYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFD 147

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ---------------------------- 623
               +R++V++ +LI+GY  KG   +A+KM ++                            
Sbjct: 148  QSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALEL 207

Query: 624  ---MEEEEIKPD----------------------LVSW-------------NSLVSGYSI 645
               M +  ++PD                      + SW             N+L+  Y  
Sbjct: 208  FKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIK 267

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   +     Y +V++W +LI G      Y+E+L  F +M +    PN  T
Sbjct: 268  CGEVETACGLFEGLS----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 323

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            M S+L  C  LG ++ G+ IH    K   G    +   T LIDMY+K G++++A++VF  
Sbjct: 324  MLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDS 383

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              N++L+SWN MI GFA++G    A  +F  + +   +PD ITF  LL+AC +SG+++ G
Sbjct: 384  ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 443

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F SM  DY I P +EHY CM+DLLG +G   EA + I TM  +PD  IW +LL +C+
Sbjct: 444  RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 503

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG++E  E  ++ L K+EP N  +Y L+ N+ A + RW +V ++R  +++ G+K V   
Sbjct: 504  MHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 563

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I+ID +VH F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K   
Sbjct: 564  SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 623

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RFHH
Sbjct: 624  LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 683

Query: 1064 FREGECSCNDCW 1075
            FR+G CSCND W
Sbjct: 684  FRDGVCSCNDYW 695



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 247/553 (44%), Gaps = 78/553 (14%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLI-FHYL--EFGDFTSAAKAFFLYFSRSYADWSSF 264
           SS++  HAQMIK G + N++  +  LI F  L   F     A   F      +   W++ 
Sbjct: 1   SSLRMIHAQMIKTG-LHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTM 59

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
              + +   +    L ++  +   G++        +LK C K  AF  G ++H  ++K G
Sbjct: 60  FRGH-ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLG 118

Query: 325 FDFDVHLKCALMNFY---GKCRD----------------------------VESANKLFS 353
           +D D+++  +L++ Y   G+  D                            + SA K+F 
Sbjct: 119 YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFD 178

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           E+  ++D + WN +I         + A++LF+EM  ++ +    T+V ++ ACA+  +  
Sbjct: 179 EIP-IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 237

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G+Q+H ++      SNL + N LI +Y +  ++E A  +F+ +   ++ SWN++I  YT
Sbjct: 238 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 297

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
            +     A  LF +M                               LR  +S    PN  
Sbjct: 298 HMNLYKEALLLFQEM-------------------------------LRSGES----PNDV 322

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILR--NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
           ++  +L A   L  ++ GR  H YI +   G+       TSL+DMY K   ++ AQ+VFD
Sbjct: 323 TMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 382

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
           ++ NR++ +WN++I G+   G    A  + ++M + EI+PD +++  L+S  S  G    
Sbjct: 383 SILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 442

Query: 652 ALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
              I   MK    I P +  +  +I     +  ++E+ +    M+ E   P+     SLL
Sbjct: 443 GRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME---PDGVIWCSLL 499

Query: 711 QTCGGLGLLQNGK 723
           + C   G ++ G+
Sbjct: 500 KACKMHGNVELGE 512


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  421 bits (1083), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/707 (33%), Positives = 374/707 (52%), Gaps = 68/707 (9%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +LQ+     +F +G+Q+H +++  S LE+N  +          N KL             
Sbjct: 65   LLQSFTNTKSFKQGQQLHAHMISFSILENNTYL----------NTKLA------------ 102

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
                     + Y G G +  A  +F+ +    +  +   WN ++ G+ ++G     L L 
Sbjct: 103  ---------AFYAGCGLMSQAEVIFDGI----VLKNSFLWNFMIRGYASNGLPMKSLVLY 149

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
            R M   G R +  +   VL+A  +L L++ GR  H  ++  GL+ D+YVG SL+ MY K 
Sbjct: 150  REMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKF 209

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
              +  A+ VFD M  R++ +WN++ISGY        A  + + M +  +  D  +   L+
Sbjct: 210  GDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLL 269

Query: 641  SGYSIWGQSKEALVIIHHMKNSGI--------------------------------YPNV 668
            S  +     KE  VI  +   + I                                + + 
Sbjct: 270  SACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDT 329

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            V+W S+I G  +N +  ESL+ F +M  +   P+  T  ++L  C  +  L+ G  IH  
Sbjct: 330  VSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSY 389

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             +K GF  +  V T L+DMYSK G+L  +R VF +  +K+L SW+ M+ G+ ++G G+EA
Sbjct: 390  LVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREA 449

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            I +   +      PD   FT++L+AC ++GLV EG + F  M  +YN+ P + HYSCMVD
Sbjct: 450  ISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVD 509

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG+LDEA+  IRTM  KP + IW ALL + R+H +++ AEI+++++F + P   ++
Sbjct: 510  LLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSS 569

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y  + N+ A   RW+DVER+R  +   G+K     S+I++D +VH F      H  T +I
Sbjct: 570  YICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDI 629

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y +L  L  ++K+ GY PDT  V+ D++EE K K+L  H+E+LAI + L+ T     IR+
Sbjct: 630  YAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRI 689

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KN RVC DCHT  K +S + GREI +RD  RFHHF +G CSC D W
Sbjct: 690  TKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 241/529 (45%), Gaps = 43/529 (8%)

Query: 184 KQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDF 243
           +Q  L+ +  G    + TN  +     +  HA MI    + N+  +   L   Y   G  
Sbjct: 53  QQYPLTSLQCGALLQSFTNT-KSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLM 111

Query: 244 TSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKL 303
           + A   F     ++   W+  +  Y S G  ++ L+ ++ E+   G    +     +LK 
Sbjct: 112 SQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLV-LYREMLCFGQRADNFTYPFVLKA 170

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C  L+   +G  VH+ ++  G + D+++  +L+  Y K  D+ +A  +F  +++  D   
Sbjct: 171 CGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE-RDLTS 229

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           WN +I    +N     A  +F  M  +   A   T++ +L ACA + A  EGK IHGY +
Sbjct: 230 WNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAV 289

Query: 424 KSALES-NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
           ++++ + N    N LI MY   N +  A R+F+ ++      W                 
Sbjct: 290 RNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVR------WK---------------- 327

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
                        D ++WN ++ G+  +G     L L R M   G  P+  +   VL A 
Sbjct: 328 -------------DTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC 374

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            ++  L+YG   H Y+++ G D +  VGT+L+DMY K   L  ++ VFD M ++++V+W+
Sbjct: 375 DQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWS 434

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KN 661
           ++++GY   G    A  +L+ M+   + PD   + S++S  S  G   E   I + M K 
Sbjct: 435 AMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKE 494

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
             + P +  ++ ++    +  +  E+   ++ ++  +IKP S   ++LL
Sbjct: 495 YNVKPALSHYSCMVDLLGRAGHLDEA---YVIIRTMEIKPTSDIWAALL 540



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD-AYVATGLIDMYSKSGNLKSAREV 760
            S    +LLQ+       + G+++H   +    +++  Y+ T L   Y+  G +  A  +
Sbjct: 58  TSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVI 117

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
           F     K    WN MI G+A  G   ++++L+ E+L  G + D  T+  +L AC +  LV
Sbjct: 118 FDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLV 177

Query: 821 EEGWK 825
           E G +
Sbjct: 178 EIGRR 182


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 741

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/674 (35%), Positives = 361/674 (53%), Gaps = 83/674 (12%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F  +     +P+++ WN +  GH       + L L   M SLG  PN
Sbjct: 81   FDGLPY---AISVFETIQ----EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L++  + +  K G++ HG++L+ G D DL+V TSL+ +YV+N  L++A++VFD
Sbjct: 134  SYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFD 193

Query: 592  NMKNRNIVA-------------------------------WNSLISGYCFKGLFVNAKKM 620
               +R++V+                               WN++ISGY   G +  A ++
Sbjct: 194  RSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253

Query: 621  LNQMEEEEIKPD----------------------LVSW-------------NSLVSGYSI 645
              +M +  I+PD                      + SW             NSL+  YS 
Sbjct: 254  FKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSK 313

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   +    +Y +V++W +LI G      Y+E+L  F +M +   +PN  T
Sbjct: 314  CGELETACGLFEGL----LYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVT 369

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA----TGLIDMYSKSGNLKSAREVF 761
            M S+L  C  LG +  G+ IH    K   +K A  A    T LIDMY+K G++++A +VF
Sbjct: 370  MLSILPACAHLGAIDIGRWIHVYIDKR--LKSATNASSLRTSLIDMYAKCGDIEAAHQVF 427

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                +K+L+SWN MI GFA++G    A  +F  + + G +PD ITF  LL+AC  SG+++
Sbjct: 428  NSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLD 487

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
             G   F +M+ DY I P +EHY CM+DLLG +G   EA + I  M  +PD  IW +LL +
Sbjct: 488  LGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKA 547

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C+I G++E  E  ++ L K+EP N   Y L+ N+ A + RW +V ++R  +++ G+K V 
Sbjct: 548  CKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP 607

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              S I+ID +VH F      HP   EIY  L  +   ++K G+VPDT  V Q+++EE K 
Sbjct: 608  GCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKE 667

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
              L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RF
Sbjct: 668  GALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRF 727

Query: 1062 HHFREGECSCNDCW 1075
            HHFR+G CSCND W
Sbjct: 728  HHFRDGVCSCNDYW 741



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 260/585 (44%), Gaps = 90/585 (15%)

Query: 177 PPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH 236
           PP D+L     LS +          +  + L S++  HAQMIK G + N++  +  L+  
Sbjct: 26  PPYDSLRNHPSLSLL----------HNCKTLQSLRLIHAQMIKTG-LHNTNYALSKLLEL 74

Query: 237 YL---EFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFR 293
            +    F     A   F      +   W++    + +   +    L+++  +   G++  
Sbjct: 75  CVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH-ALSSDPVSALKLYVCMISLGLLPN 133

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY---GKCRD------ 344
           S     +LK C K  AF  G ++H  ++K G+D D+ +  +L++ Y   G+  D      
Sbjct: 134 SYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFD 193

Query: 345 ----------------------VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
                                 +ESA KLF E+  ++D + WN +I        ++ A++
Sbjct: 194 RSPHRDVVSYTALIKGYASRGYIESAQKLFDEIP-VKDVVSWNAMISGYAETGNYKEALE 252

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           LF+EM  ++ +    T+V ++ ACA+ G+   G+Q+H ++      SNL + N L+ +YS
Sbjct: 253 LFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYS 312

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +  +LE A  +F+ +   ++ SWN++I  YT +     A  LF +M  S           
Sbjct: 313 KCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS----------- 361

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI---L 559
                                   G RPN  ++  +L A   L  +  GR  H YI   L
Sbjct: 362 ------------------------GERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           ++  +    + TSL+DMY K   ++ A +VF+++ ++++ +WN++I G+   G    A  
Sbjct: 398 KSATNAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFD 456

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGS 678
           + ++M +  I+PD +++  L+S  S  G       I   M ++  I P +  +  +I   
Sbjct: 457 IFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLL 516

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             +  ++E+ +    M+ E   P+     SLL+ C   G ++ G+
Sbjct: 517 GHSGLFKEAEEMINNMEME---PDGVIWCSLLKACKIRGNVELGE 558


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1217

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/659 (34%), Positives = 355/659 (53%), Gaps = 40/659 (6%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            + +H  ++   L  N S+   L+  Y+    +  A +VFD + + N+   N MI SY   
Sbjct: 60   RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNN 119

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G+      +F  M S  ++PD  T+ C+L      G+                       
Sbjct: 120  GFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGN----------------------- 156

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
                        +  G++ HG   + GL   L+VG  L+ MY K   L  A+ V D M  
Sbjct: 157  ------------IVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 204

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            R++V+WNSL++GY     F +A ++  +ME  +I  D  +  SL+   S    + E ++ 
Sbjct: 205  RDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS--NTTTENVMY 262

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
            +  M       ++V+W  +I   ++N    E+++ +  M+ +  +P++ +++S+L  CG 
Sbjct: 263  VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGD 322

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
               L  GK+IH    +   I +  +   LIDMY+K G L  AR+VF    ++ + SW  M
Sbjct: 323  TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAM 382

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I  +   G G +A+ LF ++ ++G  PD+I F   LAAC ++GL+EEG   F  M+  Y 
Sbjct: 383  ISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 442

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P +EH +CMVDLLG+AG + EA+ FI+ MP +P+  +WGALLG+CR+H + +   +A+
Sbjct: 443  ITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAA 502

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
             +LF+L P  S  Y L+ N+ A + RWE+V  +R+ M   G+K     S +++++I+H F
Sbjct: 503  DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 562

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                  HP + EIY EL  LV +MK+LGYVPD+     D++EE+K   L  H+EKLAIV+
Sbjct: 563  LVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVF 622

Query: 1016 GLMKTK---SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
             LM T+   S   IR+ KN R+C DCH AAK +S +  REI +RD  RFH FR G CSC
Sbjct: 623  ALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 681



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 243/544 (44%), Gaps = 65/544 (11%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VH+ +I     ++  L   LM  Y   +DV +A K+F E+ +  + ++ N +I   + N 
Sbjct: 62  VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPE-RNVIIINVMIRSYVNNG 120

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +   I++F  M     K    T   +L+AC+  G    GK+IHG   K  L S L V N
Sbjct: 121 FYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGN 180

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+SMY +   L  A  V D M   ++ SWNS+++ Y      D A  +  +M S +I  
Sbjct: 181 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISH 240

Query: 496 D---------------------------------IITWNCLLSGHFTHGSYQNVLTLLRG 522
           D                                 +++WN ++  +  +      + L  G
Sbjct: 241 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSG 300

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M++ GF P+  S++ VL A  +   L  G++ HGYI R  L  +L +  +L+DMY K  C
Sbjct: 301 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 360

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           L  A++VF+NMK+R++V+W ++IS Y F G   +A  + ++M++  + PD +++ + ++ 
Sbjct: 361 LDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAA 420

Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S  G  +E       M +   I P +     ++    +    +E+ KF  +M  E   P
Sbjct: 421 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPME---P 477

Query: 702 NSTTMSSLLQTC-----GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           N     +LL  C       +GLL   K       ++G+    YV   L ++Y+K+G  + 
Sbjct: 478 NERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGY----YVL--LSNIYAKAGRWEE 531

Query: 757 AREV--------FRKSANKTLASWNCMIMGFAIYGNG--------KEAILLFHELLETGF 800
              +         +K+   +    N +I  F +            +E  +L  ++ E G+
Sbjct: 532 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGY 591

Query: 801 QPDA 804
            PD+
Sbjct: 592 VPDS 595



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 149/369 (40%), Gaps = 74/369 (20%)

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           LK  R  H  I+   L Y+  +G  LM  Y     +  A++VFD +  RN++  N +I  
Sbjct: 56  LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPD----------------------------------- 632
           Y   G +    ++   M    +KPD                                   
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSST 175

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           L   N LVS Y   G   EA +++  M       +VV+W SL++G  QN+ + ++L+   
Sbjct: 176 LFVGNGLVSMYGKCGFLSEARLVLDEMSRR----DVVSWNSLVAGYAQNQRFDDALEVCR 231

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           +M+   I  ++ TM+SLL                                      + + 
Sbjct: 232 EMESVKISHDAGTMASLLPAVSN---------------------------------TTTE 258

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           N+   +++F K   K+L SWN MI  +       EA+ L+  +   GF+PDA++ T++L 
Sbjct: 259 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLP 318

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
           AC ++  +  G K    +     +IP +   + ++D+  K G LD A D    M  + D 
Sbjct: 319 ACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLDRARDVFENMKSR-DV 376

Query: 873 TIWGALLGS 881
             W A++ +
Sbjct: 377 VSWTAMISA 385



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 9/309 (2%)

Query: 250 FFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
           FF    +S   W+  +  Y      V E +E++  +   G    +  +T +L  C    A
Sbjct: 267 FFKMGKKSLVSWNVMIGVYMKNAMPV-EAVELYSGMEADGFEPDAVSITSVLPACGDTSA 325

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
             LG ++H  + ++    ++ L+ AL++ Y KC  ++ A  +F  +    D + W  +I 
Sbjct: 326 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKS-RDVVSWTAMIS 384

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALE 428
               + +  +A+ LF +MQ S     S   V  L AC+  G   EG+     +     + 
Sbjct: 385 AYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 444

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             L    C++ +  R  K++ A +    M  + N   W +++ +       D+     +K
Sbjct: 445 PRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADK 504

Query: 488 MNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
           +   ++ P+   +  LLS  +   G ++ V  +   M+S G + N  + +V +  +    
Sbjct: 505 L--FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 562

Query: 547 LLKYGRESH 555
           L+  G  SH
Sbjct: 563 LV--GDRSH 569


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 872

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 264/872 (30%), Positives = 428/872 (49%), Gaps = 82/872 (9%)

Query: 246  AAKAFFLYFSRSYADWSSFL--EDYES--FG----GEVQELLEVWGELHGKGVIFRSRIL 297
            AA +  LY++ +  D S     E Y S  FG    G  QE   ++  +   G+     I 
Sbjct: 41   AASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIF 100

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            + +LK+   L     G ++H   IK GF  DV +  +L++ Y K  + +    +F E+ +
Sbjct: 101  SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKE 160

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              + + W  +I    RN   E  + LF  MQ    +  S T    L   A+ G    G Q
Sbjct: 161  -RNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            +H  V+K+ L+  + V N LI++                               Y   G 
Sbjct: 220  VHTVVVKNGLDKTIPVSNSLINL-------------------------------YLKCGN 248

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            V  A  LF+K         ++TWN ++SG+  +G     L +   M+    R + SS + 
Sbjct: 249  VRKARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFAS 304

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN-R 596
            +++    L+ L++  + H  +++ G  +D  + T+LM  Y K   + +A  +F       
Sbjct: 305  IIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLG 364

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN------------------- 637
            N+V+W ++ISG+        A  + ++M+ + ++P+  +++                   
Sbjct: 365  NVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 424

Query: 638  ------------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                        +L+  Y   G+  EA  +   + N     ++V W+++++G  Q     
Sbjct: 425  KTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNK----DIVAWSAMLAGYAQAGETE 480

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL-GLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             ++K F ++ +  +KPN  T SS+L  C      +  GK+ H   +K+       V++ L
Sbjct: 481  AAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSAL 540

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            + MY+K G+++SA EVF++   K L SWN MI G+A +G   +A+ +F E+ +   + D+
Sbjct: 541  LTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDS 600

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF  + AAC ++GLVEEG KYFD M  D  I PT EH SCMVDL  +AG L++A   I 
Sbjct: 601  VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVID 660

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP    +TIW  +L +CR+H   E   +A+ ++  + P +SA Y L+ N+ A S  W++
Sbjct: 661  NMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQE 720

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
              ++R  M+E  VK    +SWI++    + F A    HP   +IY +L  L + +K LGY
Sbjct: 721  RAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGY 780

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PDT  V QDID+E K  VL  H+E+LAI +GL+ T   +P+ +IKN RVC DCH   K 
Sbjct: 781  EPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKL 840

Query: 1045 MSLVRGREIFLRDGARFHHF-REGECSCNDCW 1075
            ++ +  REI +RD  RFHHF  +G CSC D W
Sbjct: 841  IAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 196/405 (48%), Gaps = 39/405 (9%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  YL+ G+   A   F     +S   W+S +  Y + G ++ E L ++  +    V 
Sbjct: 238 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL-EALGMFYSMRLNHVR 296

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   I+KLC  L       ++H S++K GF FD +++ ALM  Y KC  +  A +L
Sbjct: 297 LSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRL 356

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E   L + + W  +I   L+N+  E A+ LF EM+    +    T   +L A   +  
Sbjct: 357 FKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISP 416

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
                ++H  V+K+  E + +V   L+  Y +  K++ A +VF  + + ++ +W++M++ 
Sbjct: 417 ----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAG 472

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y   G  + A  +F+++    ++P+  T++ +L+                          
Sbjct: 473 YAQAGETEAAIKIFSELTKGGVKPNEFTFSSILN-------------------------- 506

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
                 V  A T    +  G++ HG+ +++ LD  L V ++L+ MY K   +++A+EVF 
Sbjct: 507 ------VCAATTA--SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFK 558

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
             + +++V+WNS+ISGY   G  + A  +  +M++ ++K D V++
Sbjct: 559 RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTF 603



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 2/244 (0%)

Query: 643 YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           Y     S   L   H++ +     +  ++TSL+ G  ++   +E+ + F+ +Q   ++ +
Sbjct: 37  YCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMD 96

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
            +  SS+L+    L     G+++HC C+K GF+ D  V T L+D Y K  N K  R VF 
Sbjct: 97  CSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFD 156

Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
           +   + + +W  +I G+A     +E + LF  + + G QP++ TF A L      G+   
Sbjct: 157 EMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGR 216

Query: 823 GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
           G +   ++     +  TI   + +++L  K G + +A         K   T W +++   
Sbjct: 217 GLQ-VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT-WNSMISGY 274

Query: 883 RIHG 886
             +G
Sbjct: 275 AANG 278



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 8/262 (3%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HAQ++K      S  +  +L+  Y++ G    AAK F    ++    WS+ L  Y    G
Sbjct: 420 HAQVVKTN-YERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQ-AG 477

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHLK 332
           E +  ++++ EL   GV       + IL +C    A    G + H   IK   D  + + 
Sbjct: 478 ETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVS 537

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSS 391
            AL+  Y K   +ESA ++F      E DL+ WN +I    ++ +   A+ +F+EM+   
Sbjct: 538 SALLTMYAKKGHIESAEEVFKR--QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 595

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN-CLISMYSRNNKLELA 450
            K  S T + +  AC   G   EG++    +++    +     N C++ +YSR  +LE A
Sbjct: 596 VKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 655

Query: 451 TRVFDSMKDHNLSS-WNSMISS 471
            +V D+M +   S+ W +++++
Sbjct: 656 MKVIDNMPNLAGSTIWRTILAA 677


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 725

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/734 (32%), Positives = 373/734 (50%), Gaps = 80/734 (10%)

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A  LFS +S L + +++N ++    R+ +    I  ++ ++    +    +   +L+A +
Sbjct: 66   ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125

Query: 408  KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            KV A  EG ++HG+  K A  S+  V   L+ MY+   ++  A  VFD M   ++ +WN+
Sbjct: 126  KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            MI  Y   G +D A+ LF +M  S + PD +    ++S     G+               
Sbjct: 186  MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN--------------- 230

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
                                ++Y R  + +++ N +  D ++ T+L+ MY    C+  A 
Sbjct: 231  --------------------MRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAM 270

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            E F  M  RN+    +++SGY   G   +A+ + +Q E +    DLV W +++S Y+   
Sbjct: 271  EFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMK----DLVCWTTMISAYAESD 326

Query: 648  QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
              +EAL +   M  SGI P+VVT  S+IS                               
Sbjct: 327  HPQEALRVFEEMCCSGIKPDVVTMLSVISA------------------------------ 356

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
                 C  LG L   K +H     NG      +   LI+MY+K G L +AR+VF K   +
Sbjct: 357  -----CVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR 411

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             + SW+ MI  FA++G   +++ LF ++ +   +P+ +TF  +L  C +SGLVEEG K F
Sbjct: 412  NVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 471

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
             SM+ +YNI P IEHY CMVDL G+A  L EA + I +MP  P+  IWG+L+ +CR+HG 
Sbjct: 472  ASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGE 531

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            LE  E+A++R+ KLEP +     LM N+ A   RW+ V  +R  M++  V      S I 
Sbjct: 532  LELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRID 591

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            ++   H F      H  + EIY +LY +VS++K  GYVPD   V  D++EEEK  ++L H
Sbjct: 592  LNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWH 651

Query: 1008 TEKLAIVYGLMKTK------SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            +EKLA+ +GLM  +      S   IR++KN RVC DCH   K +S V   EI +RD  RF
Sbjct: 652  SEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRF 711

Query: 1062 HHFREGECSCNDCW 1075
            H +++G CSC D W
Sbjct: 712  HRYKDGLCSCRDYW 725



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 216/464 (46%), Gaps = 10/464 (2%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           ++S L D  S  GE +  +  +  +   G  F       ILK  +K+ A + G+E+H   
Sbjct: 82  FNSLLRDL-SRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFA 140

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            K     D  ++  LM+ Y  C  +  A  +F E+S   D + WN +I    R    + A
Sbjct: 141 FKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQ-RDVVTWNTMIERYCRFGLLDEA 199

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
            KLF EM+ S+       +  ++ AC + G     + I+ +++++ +  +  +   L++M
Sbjct: 200 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTM 259

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y+    +++A   F  M   NL    +M+S Y+  G +D A  +F++        D++ W
Sbjct: 260 YAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTE----MKDLVCW 315

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
             ++S +      Q  L +   M   G +P+  ++  V+ A   L  L   +  H Y   
Sbjct: 316 TTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHL 375

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
           NGL+  L +  +L++MY K   L  A++VF+ M  RN+V+W+S+I+ +   G   ++  +
Sbjct: 376 NGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSL 435

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSL 679
             QM++E ++P+ V++  ++ G S  G  +E   I   M +   I P +  +  ++    
Sbjct: 436 FAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFG 495

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           +    RE+L+    M    + PN     SL+  C   G L+ G+
Sbjct: 496 RANLLREALEVIESMP---MAPNVVIWGSLMSACRVHGELELGE 536


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like
            [Vitis vinifera]
          Length = 643

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/666 (35%), Positives = 371/666 (55%), Gaps = 50/666 (7%)

Query: 416  KQIHGYVLKSALESNLSVCNCLI--SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            KQ+H YV K+ L+++  +   L+  S  S  + L+ A R+F    +              
Sbjct: 22   KQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPN-------------- 67

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                                 PD+   N L+ G     + QN L     M+     P  S
Sbjct: 68   ---------------------PDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDS 106

Query: 534  -SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             S + +L+A    R L+ G + H   + +GLD  L+VGT+L+ MY +   +  A++VF+ 
Sbjct: 107  FSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEE 166

Query: 593  MKNRNIVAWNSLISGYCFK-GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
            M   N+VAWN++++  CF+ G    A  M N+M       +L SWN +++GY+  G+ + 
Sbjct: 167  MFEPNVVAWNAVVTA-CFRCGDVKGADMMFNRMPFR----NLTSWNVMLAGYTKAGELEL 221

Query: 652  ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
            A  +   M       + V+W+++I G   N  + E+  FF ++QQ  ++PN  +++  L 
Sbjct: 222  ARKLFLEMP----VKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALS 277

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF-RKSANKTLA 770
             C   G ++ GK +H    K+GF+    V   L+D YSK GN+  AR VF R    +++ 
Sbjct: 278  ACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIV 337

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            SW  MI G A++G G+EAI LFHE+ E+G +PD I F ++L AC ++GL+E+G++YF  M
Sbjct: 338  SWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKM 397

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
               YNI P IEHY CMVDL G+AG LD+A++FI  MP  P A IW  LLG+C IHG+++ 
Sbjct: 398  KDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKL 457

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
            AE    RL +L+P NS ++ L+ N+ A++ +W+DV  +R SM +  +     WS I++D+
Sbjct: 458  AERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDK 517

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG-YVPDTRCVYQDIDEEEKGKVLLSHTE 1009
            I++ F A    +  T E Y +L  ++ +++  G Y+P+   V  DI++EEK   +  H+E
Sbjct: 518  IMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSE 577

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            KLA+ +G+ +    + IR++KN RVC DCHT  K +S V G EI +RD +RFH F+ G C
Sbjct: 578  KLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSC 637

Query: 1070 SCNDCW 1075
            SC D W
Sbjct: 638  SCRDYW 643



 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 207/445 (46%), Gaps = 39/445 (8%)

Query: 315 EVHASLIKRGFDFD--VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           +VHA + K G D D  +  K  L +       ++ A +LF    +  D  + N +I    
Sbjct: 23  QVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPN-PDVFMHNTLIRGLA 81

Query: 373 RNEKWENAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            ++  +N++  F EM+   +A   S +   +L+A A   +   G Q+H   +   L+++L
Sbjct: 82  ESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHL 141

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V   L+SMYS    +  A +VF+ M + N+ +WN+++++    G V  A  +FN+M   
Sbjct: 142 FVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFR 201

Query: 492 RIQP---------------------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
            +                             D ++W+ ++ G   +G +       R +Q
Sbjct: 202 NLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQ 261

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            +G RPN  S++  L A  +   +++G+  HG+I ++G  + + V  +L+D Y K   + 
Sbjct: 262 QVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVG 321

Query: 585 NAQEVFDNM-KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            A+ VF+ M + R+IV+W S+I+G    G    A ++ ++MEE  I+PD +++ S++   
Sbjct: 322 MARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYAC 381

Query: 644 SIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           S  G  ++     + MK+   I P +  +  ++    +     ++ +F I M    + P 
Sbjct: 382 SHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMP---VLPT 438

Query: 703 STTMSSLLQTC---GGLGLLQNGKE 724
           +    +LL  C   G + L +  KE
Sbjct: 439 AIIWRTLLGACSIHGNVKLAERVKE 463



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 36/365 (9%)

Query: 542 VTELRLLKYGRESHGYILRNGLDYD-LYVGTSLMDMYVK-NDCLQNAQEVFDNMKNRNIV 599
           +T  R LK  ++ H Y+ + GLD D +  G  L+   V   D L  A+ +F +  N ++ 
Sbjct: 12  LTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVF 71

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP-----------DLVSWNSLVSGYSIWGQ 648
             N+LI G        N+     +M      P              S+ SL SG  +  Q
Sbjct: 72  MHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQ 131

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES--LKFFIQMQQEDIKPNSTTM 706
           +     I+H     G+  ++   T+L+S       Y E   + F  ++ +E  +PN    
Sbjct: 132 A-----IVH-----GLDTHLFVGTTLVS------MYSECGFVAFAKKVFEEMFEPNVVAW 175

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           ++++  C   G ++       +       ++      ++  Y+K+G L+ AR++F +   
Sbjct: 176 NAVVTACFRCGDVKGAD----MMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPV 231

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
           K   SW+ MI+GFA  G   EA   F EL + G +P+ ++ T  L+AC ++G +E G K 
Sbjct: 232 KDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFG-KI 290

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
                     +  +   + ++D   K G +  A      MP K     W +++    +HG
Sbjct: 291 LHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHG 350

Query: 887 HLEYA 891
           + E A
Sbjct: 351 YGEEA 355



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 10/307 (3%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G+   A K F     +    WS+ +  + +  G   E    + EL   G+      
Sbjct: 213 YTKAGELELARKLFLEMPVKDDVSWSTMIVGF-AHNGFFYEAFGFFRELQQVGMRPNEVS 271

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT  L  C    A   G  +H  + K GF + V +  AL++ Y KC +V  A  +F  + 
Sbjct: 272 LTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMP 331

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +    + W  +I     +   E AI+LF EM+ S  +      + +L AC+  G   +G 
Sbjct: 332 EKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGY 391

Query: 417 QIHGYVLKSA--LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS-SWNSMISSYT 473
           + + Y +K    +E  +    C++ +Y R  +L+ A      M     +  W +++ + +
Sbjct: 392 E-YFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACS 450

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGM--QSLGFRP 530
             G V +A  +  ++  S + P+    + LLS  +   G +++V  + R M  Q +   P
Sbjct: 451 IHGNVKLAERVKERL--SELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTP 508

Query: 531 NGSSVSV 537
             S + V
Sbjct: 509 GWSMIEV 515


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 850

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/793 (31%), Positives = 388/793 (48%), Gaps = 118/793 (14%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN +I     N +    +  F  M   S    + T   + +AC ++ +   G   H    
Sbjct: 95   WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             +   SN+ V N L++MYSR   L  A +VFD M                        W 
Sbjct: 155  VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMP----------------------VW- 191

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAV 542
                        D+++WN ++  +   G  +  L +   M +  GFRP+  ++  VL   
Sbjct: 192  ------------DVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPC 239

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
              +     G++ HG+ + + +  +++VG  L+DMY K   +  A  VF NM  +++V+WN
Sbjct: 240  ASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWN 299

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEE---------------------------------- 628
            ++++GY   G F +A ++  QM+EE+                                  
Sbjct: 300  AMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359

Query: 629  -IKPDLVSWNSLVSG---------------YSIW--------GQSKEALVI--------- 655
             IKP+ V+  S++SG               Y+I         G   E +VI         
Sbjct: 360  GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAK 419

Query: 656  -----IHHMKNSGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNSTT 705
                 I       + P   +VVTWT +I G  Q+ +  ++L+   +M +ED   +PN+ T
Sbjct: 420  CKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA---YVATGLIDMYSKSGNLKSAREVFR 762
            +S  L  C  L  L  GK+IH   L+N   ++A   +V+  LIDMY+K G++  AR VF 
Sbjct: 480  ISCALVACASLAALSIGKQIHAYALRNQ--QNAVPLFVSNCLIDMYAKCGDIGDARLVFD 537

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
                K   +W  ++ G+ ++G G+EA+ +F E+   GF+ D +T   +L AC +SG++++
Sbjct: 538  NMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G +YF+ M TD+ + P  EHY+C+VDLLG+AG L+ A   I  MP +P   +W ALL  C
Sbjct: 598  GMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCC 657

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIHG +E  E A++++ +L   N  +Y L+ N+ A + RW+DV R+R  M   G+K    
Sbjct: 658  RIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPG 717

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             SW++  +    F      HP   EIY  L   +  +K +GYVP+T     D+D+EEK  
Sbjct: 718  CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDD 777

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            +L  H+EKLA+ YG++ T   A IR+ KN RVC DCHTA  YMS +   EI LRD +RFH
Sbjct: 778  LLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFH 837

Query: 1063 HFREGECSCNDCW 1075
            HF+ G CSC   W
Sbjct: 838  HFKNGLCSCKGYW 850



 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 171/680 (25%), Positives = 295/680 (43%), Gaps = 107/680 (15%)

Query: 202 NKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD- 260
           +K + +S VK  H +++  G +  + ++   LI  Y+  G  + A  +    F  S A  
Sbjct: 36  HKCKTISQVKLIHQKLLSFGIL--TLNLTSHLISTYISLGCLSHAV-SLLRRFPPSDAGV 92

Query: 261 --WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
             W+S +  Y +  G   + L  +  +H       +     + K C ++ +   G   HA
Sbjct: 93  YHWNSLIRSYGN-NGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHA 151

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
                GF  +V +  AL+  Y +C  +  A K+F E+  + D + WN II    +  K +
Sbjct: 152 LSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMP-VWDVVSWNSIIESYAKLGKPK 210

Query: 379 NAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            A+++F +M      +    T+V +L  CA VG    GKQ HG+ + S +  N+ V NCL
Sbjct: 211 MALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCL 270

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           + MY++   ++ A  VF +M   ++ SWN+M++ Y+ +G  + A  LF +M   +I+ D+
Sbjct: 271 VDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDV 330

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
           +TW+  +SG+   G     L + R M S G +PN  ++  VL     +  L +G+E H Y
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390

Query: 558 IL-------RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGY 608
            +       +NG   +  V   L+DMY K   +  A+ +FD++  K R++V W  +I GY
Sbjct: 391 AIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGY 450

Query: 609 CFKGLFVNAKKMLNQMEEEEIK-------------------------------------- 630
              G    A ++L++M EE+ +                                      
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNA 510

Query: 631 -PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
            P  VS N L+  Y+  G   +A ++  +M    +  N VTWTSL++G   +    E+L 
Sbjct: 511 VPLFVS-NCLIDMYAKCGDIGDARLVFDNM----MEKNEVTWTSLMTGYGMHGYGEEALG 565

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG------ 743
            F +M++   K +  T+  +L  C   G++  G E       N    D  V+ G      
Sbjct: 566 IFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF-----NRMKTDFGVSPGPEHYAC 620

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           L+D+  ++G L +A  +                                    E   +P 
Sbjct: 621 LVDLLGRAGRLNAALRLIE----------------------------------EMPMEPP 646

Query: 804 AITFTALLAACKNSGLVEEG 823
            + + ALL+ C+  G VE G
Sbjct: 647 PVVWVALLSCCRIHGKVELG 666



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 132/310 (42%), Gaps = 44/310 (14%)

Query: 639 LVSGYSIWGQSKEALVIIHHM--KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
           L+S Y   G    A+ ++      ++G+Y     W SLI     N    + L  F  M  
Sbjct: 65  LISTYISLGCLSHAVSLLRRFPPSDAGVY----HWNSLIRSYGNNGRANKCLSSFCLMHS 120

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
               P++ T   + + CG +  ++ G   H L    GF+ + +V   L+ MYS+ G+L  
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQPDAITFTALLAACK 815
           AR+VF +     + SWN +I  +A  G  K A+ +F ++  E GF+PD IT   +L  C 
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240

Query: 816 NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
           + G    G K F   +    +I  +   +C+VD+  K G +DEA      MP K D   W
Sbjct: 241 SVGTRSLG-KQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSW 298

Query: 876 GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
            A++          Y++I                           R+ED  RL   M E 
Sbjct: 299 NAMVAG--------YSQIG--------------------------RFEDAVRLFEQMQEE 324

Query: 936 GVK-SVLVWS 944
            +K  V+ WS
Sbjct: 325 KIKMDVVTWS 334


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 745

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 242/750 (32%), Positives = 375/750 (50%), Gaps = 97/750 (12%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV-KMLQACAKVGAFHEGKQIHGYV 422
            +N +I     N   + +   +  M+ + A A+   I+  +L+ACA+  +   G+++HG+ 
Sbjct: 55   YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
             K+   S++ VCN L++MY +   L  A  VFD M + ++ SW +M+  Y          
Sbjct: 115  QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYV--------- 165

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
                                         ++   L L+R MQ +G + +G ++  ++   
Sbjct: 166  --------------------------RSKAFGEALRLVREMQFVGVKLSGVALISLIAVF 199

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVG--TSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
              L  +K GR  HGYI+RN  D  + V   T+L+DMY K  CL +AQ +FD +  R++V+
Sbjct: 200  GNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVS 259

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------DLVSW------ 636
            W  +I+G           K  N+M EE++ P                  DL  W      
Sbjct: 260  WTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLL 319

Query: 637  -----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                        +L+  Y   GQ   A  + + +K      +V  W+ LIS         
Sbjct: 320  RNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKK----DVKIWSVLISAYAHVSCMD 375

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            +    F++M   D+KPN+ TM SLL  C   G L  GK  H    ++G   D  + T LI
Sbjct: 376  QVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALI 435

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            +MY+K G++  AR +F ++  + +  WN M+ GF+++G GKEA+ LF E+   G +P+ I
Sbjct: 436  NMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDI 495

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF ++  AC +SGL                    +EHY C+VDLLG+AG+LDEA + I  
Sbjct: 496  TFVSIFHACSHSGL--------------------MEHYGCLVDLLGRAGHLDEAHNIIEN 535

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP +P+  IWGALL +C++H +L   E+A+R++ +L+P N     L  N+ A + RW DV
Sbjct: 536  MPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDV 595

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
              +R +M   G+K     SWI++   VH F +       T ++Y  +  +  ++++ GY 
Sbjct: 596  TSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYT 655

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            P+T  V  +IDEEEK   L  H+EKLA  +GL+ T    PIR++KN R+C DCH A K +
Sbjct: 656  PNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLL 715

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S + GR I +RD  RFHHF EG CSC   W
Sbjct: 716  SKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 130/554 (23%), Positives = 229/554 (41%), Gaps = 124/554 (22%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           IL  +LK C +  +  LG E+H    K GF  DV +  ALMN Y KC  + SA  +F ++
Sbjct: 90  ILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQM 149

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            +  D + W  ++   +R++ +  A++L REMQF   K     ++ ++     +     G
Sbjct: 150 PE-RDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSG 208

Query: 416 KQIHGYVLKSALESNL--SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           + +HGY++++  +  +  S+   LI MY +   L  A R+FD +   ++ SW  MI+   
Sbjct: 209 RAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCI 268

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
               +D     FN+M   ++ P                   N +TLL  +   GF     
Sbjct: 269 RSCRLDEGAKNFNRMLEEKLFP-------------------NEITLLSLITECGF----- 304

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
                      +  L  G+  H Y+LRNG    L + T+L+DMY K   +  A+ +F+ +
Sbjct: 305 -----------VGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQ 648
           K +++  W+ LIS Y           +  +M   ++KP+ V+  SL+S     G    G+
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413

Query: 649 SKEALVIIHHMK--------------------------NSGIYPNVVTWTSLISGSLQNE 682
              A +  H ++                          N  +  ++  W ++++G   + 
Sbjct: 414 WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHG 473

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
             +E+L+ F +M+   ++PN  T  S+   C   GL++     H  C             
Sbjct: 474 CGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME-----HYGC------------- 515

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQ 801
            L+D+  ++G+L  A                                   H ++E    +
Sbjct: 516 -LVDLLGRAGHLDEA-----------------------------------HNIIENMPMR 539

Query: 802 PDAITFTALLAACK 815
           P+ I + ALLAACK
Sbjct: 540 PNTIIWGALLAACK 553



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 24/283 (8%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL----------EDYESFGGEVQEL 278
           M  +LI  Y + G   SA + F     RS   W+  +          E  ++F   ++E 
Sbjct: 228 MTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEK 287

Query: 279 LEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
           L            F + I L  ++  C  +    LG   HA L++ GF   + L  AL++
Sbjct: 288 L------------FPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALID 335

Query: 338 FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
            YGKC  V  A  LF+ V   +D  +W+ +I         +    LF EM  +  K  + 
Sbjct: 336 MYGKCGQVGYARALFNGVKK-KDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNV 394

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+V +L  CA+ GA   GK  H Y+ +  LE ++ +   LI+MY++   + +A  +F+  
Sbjct: 395 TMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEA 454

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
              ++  WN+M++ ++  G    A  LF++M S  ++P+ IT+
Sbjct: 455 MQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITF 497


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Brachypodium distachyon]
          Length = 886

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 253/813 (31%), Positives = 403/813 (49%), Gaps = 96/813 (11%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAK 393
            +MN Y K   +  A +LF  +    D   WN I+    ++ ++ NA+ +F  M Q   + 
Sbjct: 98   MMNGYAKLGSLSDAVELFGRMP-TRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSL 156

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
              + T   ++++C  +G      Q+ G + K   + +  V   L+ M  R   ++ A++ 
Sbjct: 157  PNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQ 216

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F  +K+  +   NSM+  Y     VD A  +F  M     + D+++WN ++S     G  
Sbjct: 217  FSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMP----ERDVVSWNMVISALSKSGRV 272

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            +  L ++  M   G RP+ ++ +  L A   L  L++G++ H  ++RN    D YV +++
Sbjct: 273  REALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAM 332

Query: 574  MDMY-------------------------------VKNDCLQNAQEVFDNMK-------- 594
            +++Y                               ++  C   + E+F+ M+        
Sbjct: 333  VELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQ 392

Query: 595  -------------------------------NRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
                                            R +V  NSLIS Y   G   NA+ + N 
Sbjct: 393  FALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNF 452

Query: 624  MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            M E     D+VSW  +++ YS  G   +A      M       NV+TW +++   +Q+  
Sbjct: 453  MAER----DIVSWTGMITAYSQVGNIAKAREFFDDMSTR----NVITWNAMLGAYIQHGA 504

Query: 684  YRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              + LK +  M  E D+ P+  T  +L + C  +G  + G +I    +K G I D  V  
Sbjct: 505  EEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVN 564

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             +I MYSK G +  AR+ F   + K L SWN MI G++ +G GK+AI +F ++L  G +P
Sbjct: 565  AVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKP 624

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D I++ A+L+ C +SGLVEEG  YFD M  D+NI P +EH+SCMVDLLG+AG+L EA + 
Sbjct: 625  DYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNL 684

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MP KP A +WGALL +C+ HG+ + AE+A++ LF L+   S  Y L+  + A + + 
Sbjct: 685  IDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKS 744

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            +D  ++R  M + G+K    +SW++++  VHVF AE   HP    I  +L  L+ ++  L
Sbjct: 745  DDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHL 804

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYV             E  +  + H+EKLA+ +G+M   +  PI ++KN R+C DCHT  
Sbjct: 805  GYV-----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVI 853

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K +S V  RE  +RDG RFHHF+ G CSC D W
Sbjct: 854  KLISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/543 (23%), Positives = 255/543 (46%), Gaps = 18/543 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S++  Y +      A + F     R    W+  +    S  G V+E L++  ++HGKGV 
Sbjct: 230 SMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISAL-SKSGRVREALDMVVDMHGKGVR 288

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S   T  L  C +L +   G ++H  +I+     D ++  A++  Y KC   + A ++
Sbjct: 289 PDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRV 348

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           FS + D  + + W  +I   L+   +  +++LF +M+          +  ++  C     
Sbjct: 349 FSSLRD-RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMD 407

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G Q+H   LKS     + V N LISMY++   L+ A  +F+ M + ++ SW  MI++
Sbjct: 408 ICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITA 467

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRP 530
           Y+ +G +  A   F+ M++     ++ITWN +L  +  HG+ ++ L +   M +     P
Sbjct: 468 YSQVGNIAKAREFFDDMSTR----NVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIP 523

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           +  +   + +   ++   K G +  G+ ++ GL  D  V  +++ MY K   +  A++ F
Sbjct: 524 DWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAF 583

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
           D +  +++V+WN++I+GY   G+   A ++ + +  +  KPD +S+ +++SG S  G  +
Sbjct: 584 DFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVE 643

Query: 651 EALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           E       MK +  I P +  ++ ++    +  +  E+     +M    +KP +    +L
Sbjct: 644 EGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMP---MKPTAEVWGAL 700

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG---LIDMYSKSGNLKSAREVFRKSAN 766
           L  C   G      ++  L  K+ F  D+  + G   L  MY+ +G    + +V +   +
Sbjct: 701 LSACKTHG----NNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRD 756

Query: 767 KTL 769
           K +
Sbjct: 757 KGI 759



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 209/473 (44%), Gaps = 51/473 (10%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L A    GA  + + +   +     E N+   N +++ Y++   L  A  +F  M   +
Sbjct: 66  LLHAYLSCGALSDARNL---LRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRD 122

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ-PDIITWNCLLSGHFTHGSYQNVLTLL 520
           ++SWN+++S Y   G    A  +F  M  +    P+  T+ C++      G ++  L LL
Sbjct: 123 VASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLL 182

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             +     + +    + ++  +     + +  +    I     +  +    S++  Y K+
Sbjct: 183 GLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRI----KNPTIICRNSMLVGYAKS 238

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS-- 638
             + +A E+F +M  R++V+WN +IS     G    A  M+  M  + ++PD  ++ S  
Sbjct: 239 HGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSL 298

Query: 639 ---------------------------------LVSGYSIWGQSKEALVIIHHMKNSGIY 665
                                            +V  Y+  G  KEA  +   +++    
Sbjct: 299 TACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDR--- 355

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            N V+WT LI G LQ   + ES++ F QM+ E +  +   +++L+  C     +  G ++
Sbjct: 356 -NSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQL 414

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
           H LCLK+G  +   V+  LI MY+K GNL++A  +F   A + + SW  MI  ++  GN 
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474

Query: 786 KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            +A   F ++       + IT+ A+L A    G  E+G K +  M T+ ++IP
Sbjct: 475 AKAREFFDDM----STRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIP 523


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Glycine max]
          Length = 782

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 259/761 (34%), Positives = 390/761 (51%), Gaps = 52/761 (6%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D+     +++ Y    +++ A++LF+     + D + +N +I     +     A++LF +
Sbjct: 61   DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFH-EGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            M+         T   +L A + +       +Q+H  V K    S  SV N L+S Y    
Sbjct: 121  MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180

Query: 446  KLEL---------ATRVFDSMKD--HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
               L         A ++FD       +  +W ++I+ Y     +  A  L   M      
Sbjct: 181  SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDH--- 237

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
               + WN ++SG+   G Y+    LLR M SLG + +  + + V+ A +   L   GR+ 
Sbjct: 238  -IAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQV 296

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H Y+LR  +    +   S+                            N+LI+ Y   G  
Sbjct: 297  HAYVLRTVVQPSGHFVLSVN---------------------------NALITLYTRCGKL 329

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
            V A+++ ++M  +    DLVSWN+++SG     + +EA  I   M       +++TWT +
Sbjct: 330  VEARRVFDKMPVK----DLVSWNAILSGCVNARRIEEANSIFREMPVR----SLLTWTVM 381

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            ISG  QN    E LK F QM+ E ++P     +  + +C  LG L NG+++H   ++ G 
Sbjct: 382  ISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGH 441

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                 V   LI MYS+ G +++A  VF         SWN MI   A +G+G +AI L+ +
Sbjct: 442  DSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEK 501

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +L+    PD ITF  +L+AC ++GLV+EG  YFD+M   Y I P  +HYS ++DLL +AG
Sbjct: 502  MLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAG 561

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
               EA +   +MPF+P A IW ALL  C IHG++E    A+ RL +L P     Y  + N
Sbjct: 562  MFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSN 621

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A   +W++V R+R  M E GVK     SWI+++ +VHVF  + A HP    +Y  L  
Sbjct: 622  MYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQ 681

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            LV EM+KLGYVPDT+ V  D++ E+K   L +H+EKLA+VYG+MK    A IRV KN R+
Sbjct: 682  LVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRI 741

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH A KY+S V  REI +RD  RFHHFR GECSC++ W
Sbjct: 742  CGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/493 (22%), Positives = 224/493 (45%), Gaps = 36/493 (7%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            + +H ++L S  +    + N LI  Y ++  +  A  +FD +   ++ +  +M+S+Y+ 
Sbjct: 15  ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG-SYQNVLTLLRGMQSLGFRPNGS 533
            G + +A  LFN    S    D +++N +++  F+H       L L   M+ LGF P+  
Sbjct: 75  AGNIKLAHQLFNATPMS--IRDTVSYNAMITA-FSHSHDGHAALQLFVQMKRLGFVPDPF 131

Query: 534 SVSVVLQAVTELRLLK-YGRESHGYILRNGLDYDLYVGTSLMDMYVK-------NDC--L 583
           + S VL A++ +   + + ++ H  + + G      V  +LM  YV        N C  +
Sbjct: 132 TFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLM 191

Query: 584 QNAQEVFDNMK--NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             A+++FD      R+  AW ++I+GY      V A+++L  M +       V+WN+++S
Sbjct: 192 AAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIA----VAWNAMIS 247

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS-------LQNENYRESLKFFIQM 694
           GY   G  +EA  ++  M + GI  +  T+TS+IS +       +  + +   L+  +Q 
Sbjct: 248 GYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQP 307

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
               +   +  + +L   CG L   +              +KD      ++     +  +
Sbjct: 308 SGHFVLSVNNALITLYTRCGKLVEARR-------VFDKMPVKDLVSWNAILSGCVNARRI 360

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           + A  +FR+   ++L +W  MI G A  G G+E + LF+++   G +P    +   +A+C
Sbjct: 361 EEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASC 420

Query: 815 KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
              G ++ G +   S         ++   + ++ +  + G ++ A     TMP+  D+  
Sbjct: 421 SVLGSLDNG-QQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVS 478

Query: 875 WGALLGSCRIHGH 887
           W A++ +   HGH
Sbjct: 479 WNAMIAALAQHGH 491



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 183/419 (43%), Gaps = 39/419 (9%)

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
           + +L    + R  H +IL +G      +   L+D Y K+  +  A+ +FD +   +IVA 
Sbjct: 6   LAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAA 65

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            +++S Y   G    A ++ N      I+ D VS+N++++ +S       AL +   MK 
Sbjct: 66  TTMLSAYSAAGNIKLAHQLFNA-TPMSIR-DTVSYNAMITAFSHSHDGHAALQLFVQMKR 123

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ-------TCG 714
            G  P+  T++S++ G+L      E+     Q+  E  K  + ++ S+L        +C 
Sbjct: 124 LGFVPDPFTFSSVL-GALSLIADEET--HCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180

Query: 715 GLGLLQNGKEIHCLCLKNGFI---------KDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
              L+ +     C+ +              +D    T +I  Y ++ +L +ARE+     
Sbjct: 181 SSPLVNS-----CVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMT 235

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
           +    +WN MI G+   G  +EA  L   +   G Q D  T+T++++A  N+GL   G +
Sbjct: 236 DHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQ 295

Query: 826 YFDSMSTDYNIIPTIEHY-----SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
               +     ++    H+     + ++ L  + G L EA      MP K D   W A+L 
Sbjct: 296 VHAYVLR--TVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILS 352

Query: 881 SCRIHGHLEYAEIASRRLFKLEPCNS-ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            C     +E A      +F+  P  S   + +M++ LA +   E+  +L + M   G++
Sbjct: 353 GCVNARRIEEAN----SIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLE 407



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C+ L +   G ++H+ +I+ G D  + +  AL+  Y +C  VE+A+ +F  +  + D + 
Sbjct: 420 CSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVS 478

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
           WN +I    ++     AI+L+ +M          T + +L AC+  G   EG+ 
Sbjct: 479 WNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRH 532


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
          Length = 695

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/633 (35%), Positives = 349/633 (55%), Gaps = 43/633 (6%)

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            +D A S+FN ++    +P+   +N ++ G     S  N L L + M     + +  + S 
Sbjct: 71   IDYALSIFNHID----KPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSS 126

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            VL+A + ++ L+ G + H  IL++G   + +V  +L+ MY     +  A+ VFD M  R+
Sbjct: 127  VLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERS 186

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--------------------- 636
            IVAWNS++SGY   GL+    K+  ++ E  I+ D V+                      
Sbjct: 187  IVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGE 246

Query: 637  --------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                           SL+  Y+  GQ   A  +   M       +VV W+++ISG  Q +
Sbjct: 247  YIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKR----DVVAWSAMISGYAQAD 302

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              +E+L  F +MQ+ ++ PN  TM S+L +C  LG  + GK +H    K        + T
Sbjct: 303  RCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGT 362

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             LID Y+K G +  + EVF++ + K + +W  +I G A  G GK A+  F  +LE   +P
Sbjct: 363  QLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKP 422

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + +TF  +L+AC ++ LV++G   F+SM  D++I P IEHY CMVD+LG+AG+L+EA+ F
Sbjct: 423  NDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQF 482

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MPF P+A +W  LL SCR H ++E AE +   + +LEP +S +Y L+ N  A+  R 
Sbjct: 483  IDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRV 542

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            ED  R+R  + E  +K +   S I++D +VH F +E   H  + EI+  L  ++ ++K+L
Sbjct: 543  EDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRL 602

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVP+T     + +EE K   +  H+EKLAI YGL++T  R  IR+ KN R+C DCH A 
Sbjct: 603  GYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNAT 662

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K++S V  R I +RD  RFHHF++G CSCND W
Sbjct: 663  KFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 207/485 (42%), Gaps = 99/485 (20%)

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           +NA+ LF++M   S +    T   +L+AC+++ A  EG+Q+H  +LKS  +SN  V N L
Sbjct: 103 DNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTL 162

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           I MY+   ++ +A  VFD M + ++ +WNSM+S YT  G  D    LF K+   RI+ D 
Sbjct: 163 IQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDD 222

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
           +T   ++S                                VL A   L  L+ G     Y
Sbjct: 223 VT---MIS--------------------------------VLMACGRLANLEIGELIGEY 247

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           I+  GL  +  + TSL+DMY K   +  A+++FD M  R++VAW+++ISGY        A
Sbjct: 248 IVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEA 307

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI------------- 664
             + ++M++  + P+ V+  S++   ++ G  +    +  ++K   +             
Sbjct: 308 LNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDF 367

Query: 665 ------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
                             + NV TWT+LI G   N   + +L+FF  M + D+KPN  T 
Sbjct: 368 YAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTF 427

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
             +L  C    L+  G+ +                              S R  F     
Sbjct: 428 IGVLSACSHACLVDQGRHL----------------------------FNSMRRDF--DIE 457

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
             +  + CM+      G  +EA      +    F P+A+ +  LLA+C+    +E   K 
Sbjct: 458 PRIEHYGCMVDILGRAGFLEEAYQFIDNM---PFPPNAVVWRTLLASCRAHKNIEMAEKS 514

Query: 827 FDSMS 831
            + ++
Sbjct: 515 LEHIT 519



 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/436 (22%), Positives = 192/436 (44%), Gaps = 40/436 (9%)

Query: 279 LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
           L ++ ++H K V       + +LK C+++ A   G +VHA ++K GF  +  ++  L+  
Sbjct: 106 LLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQM 165

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           Y  C  +  A  +F  + +    + WN ++    +N  W+  +KLFR++     +    T
Sbjct: 166 YANCGQIGVARHVFDGMPE-RSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVT 224

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           ++ +L AC ++     G+ I  Y++   L  N ++   LI MY++  +++ A ++FD M 
Sbjct: 225 MISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD 284

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
             ++ +W++MIS Y        A +LF++M    + P+ +T   +L      G+Y+    
Sbjct: 285 KRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYET--- 341

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
                                           G+  H YI +  +   + +GT L+D Y 
Sbjct: 342 --------------------------------GKWVHFYIKKKKMKLTVTLGTQLIDFYA 369

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           K   +  + EVF  M  +N+  W +LI G    G    A +  + M E ++KP+ V++  
Sbjct: 370 KCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIG 429

Query: 639 LVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           ++S  S      +   + + M+    I P +  +  ++    +     E+ +F   M   
Sbjct: 430 VLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMP-- 487

Query: 698 DIKPNSTTMSSLLQTC 713
              PN+    +LL +C
Sbjct: 488 -FPPNAVVWRTLLASC 502



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 150/312 (48%), Gaps = 9/312 (2%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSR 256
           L   ++ + L   +  HA ++K G  + S++ V+ +LI  Y   G    A   F     R
Sbjct: 128 LKACSRMKALREGEQVHALILKSG--FKSNEFVENTLIQMYANCGQIGVARHVFDGMPER 185

Query: 257 SYADWSSFLEDYESFG--GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
           S   W+S L  Y   G   EV +L     EL    + F    +  +L  C +L    +G 
Sbjct: 186 SIVAWNSMLSGYTKNGLWDEVVKLFRKILELR---IEFDDVTMISVLMACGRLANLEIGE 242

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            +   ++ +G   +  L  +L++ Y KC  V++A KLF E+ D  D + W+ +I    + 
Sbjct: 243 LIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEM-DKRDVVAWSAMISGYAQA 301

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           ++ + A+ LF EMQ  +      T+V +L +CA +GA+  GK +H Y+ K  ++  +++ 
Sbjct: 302 DRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLG 361

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             LI  Y++   ++ +  VF  M   N+ +W ++I      G   +A   F+ M  + ++
Sbjct: 362 TQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVK 421

Query: 495 PDIITWNCLLSG 506
           P+ +T+  +LS 
Sbjct: 422 PNDVTFIGVLSA 433



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 8/273 (2%)

Query: 226 SDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL 285
           ++ +  SLI  Y + G   +A K F     R    WS+ +  Y       +E L ++ E+
Sbjct: 256 NNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ-ADRCKEALNLFHEM 314

Query: 286 HGKGVIFRSRILTI-ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
             KG ++ + +  + +L  C  L A+  G  VH  + K+     V L   L++FY KC  
Sbjct: 315 Q-KGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGY 373

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           ++ + ++F E+S  ++   W  +I     N + + A++ F  M  +  K    T + +L 
Sbjct: 374 IDRSVEVFKEMS-FKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLS 432

Query: 405 ACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNL 462
           AC+      +G+ +   + +   +E  +    C++ +  R   LE A +  D+M    N 
Sbjct: 433 ACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNA 492

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             W ++++S      +++A      +  +R++P
Sbjct: 493 VVWRTLLASCRAHKNIEMAEKSLEHI--TRLEP 523


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/620 (35%), Positives = 345/620 (55%), Gaps = 44/620 (7%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            Q ++++W  ++SG   +  +   +    GM+  G  P   + S  ++A   L  ++ G++
Sbjct: 3    QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 62

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             H   L+ G+  +L+VG++L DMY K   + +A +VF+ M  ++ V+W ++I GY   G 
Sbjct: 63   MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122

Query: 614  FVNAKKMLNQMEEEEI-----------------------------------KPDLVSWNS 638
            F  A     +M +EE+                                   + D+   N+
Sbjct: 123  FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 182

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            L   YS  G  + A  +       GI     NVV++T LI G ++ E   + L  F++++
Sbjct: 183  LTDMYSKAGDMESASNVF------GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 236

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
            ++ I+PN  T SSL++ C     L+ G ++H   +K  F +D +V++ L+DMY K G L+
Sbjct: 237  RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 296

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             A + F +  + T  +WN ++  F  +G GK+AI +F  +++ G +P+AITF +LL  C 
Sbjct: 297  QAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 356

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            ++GLVEEG  YF SM   Y ++P  EHYSC++DLLG+AG L EA +FI  MPF+P+A  W
Sbjct: 357  HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 416

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
             + LG+CRIHG  E  ++A+ +L KLEP NS    L+ N+ A   +WEDV  +R  M + 
Sbjct: 417  CSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDG 476

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
             VK +  +SW+ +    HVF AE   HP    IY +L  L+ ++K  GYVP T  V  D+
Sbjct: 477  NVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDM 536

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            D+  K K+L  H+E++A+ + L+      PI V KN RVC DCH+A K++S V GR+I +
Sbjct: 537  DDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIV 596

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD +RFHHF +G CSC D W
Sbjct: 597  RDNSRFHHFTDGSCSCGDYW 616



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 192/424 (45%), Gaps = 39/424 (9%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           ++ C  L +  +G ++H   +K G   ++ +   L + Y KC  +  A K+F E+   +D
Sbjct: 48  IRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-CKD 106

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
           ++ W  +I    +  ++E A+  F++M           +   L AC  + A   G+ +H 
Sbjct: 107 EVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHS 166

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
            V+K   ES++ V N L  MYS+   +E A+ VF       + S    + SYT       
Sbjct: 167 SVVKLGFESDIFVGNALTDMYSKAGDMESASNVF------GIDSECRNVVSYT------- 213

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
                                CL+ G+      +  L++   ++  G  PN  + S +++
Sbjct: 214 ---------------------CLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIK 252

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
           A      L+ G + H  +++   D D +V + L+DMY K   L+ A + FD + +   +A
Sbjct: 253 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIA 312

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM- 659
           WNSL+S +   GL  +A K+  +M +  +KP+ +++ SL++G S  G  +E L   + M 
Sbjct: 313 WNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMD 372

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
           K  G+ P    ++ +I    +    +E+ +F  +M  E   PN+    S L  C   G  
Sbjct: 373 KTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFE---PNAFGWCSFLGACRIHGDK 429

Query: 720 QNGK 723
           + GK
Sbjct: 430 EMGK 433



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 199/468 (42%), Gaps = 69/468 (14%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I    +N K+  AI+ F  M+              ++ACA +G+   GKQ+H   L
Sbjct: 9   WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 68

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           K  + S L V + L  MYS+   +  A +VF+ M   +  SW +MI  Y+ +G  + A  
Sbjct: 69  KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 128

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            F KM    +  D                 Q+VL                     L A  
Sbjct: 129 AFKKMIDEEVTID-----------------QHVLC------------------STLGACG 153

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD-NMKNRNIVAWN 602
            L+  K+GR  H  +++ G + D++VG +L DMY K   +++A  VF  + + RN+V++ 
Sbjct: 154 ALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYT 213

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV----------SGYSIWGQSKE- 651
            LI GY           +  ++  + I+P+  +++SL+           G  +  Q  + 
Sbjct: 214 CLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKI 273

Query: 652 --------ALVIIHHMKNSGIY------------PNVVTWTSLISGSLQNENYRESLKFF 691
                   + +++      G+             P  + W SL+S   Q+   ++++K F
Sbjct: 274 NFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIF 333

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSK 750
            +M    +KPN+ T  SLL  C   GL++ G +  + +    G +      + +ID+  +
Sbjct: 334 ERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGR 393

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFA-IYGNGKEAILLFHELLE 797
           +G LK A+E   +   +  A   C  +G   I+G+ +   L   +L++
Sbjct: 394 AGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK 441



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 2/318 (0%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G    A K F     +    W++ ++ Y   G E +E L  + ++  + V     +
Sbjct: 86  YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG-EFEEALLAFKKMIDEEVTIDQHV 144

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L   L  C  L A   G  VH+S++K GF+ D+ +  AL + Y K  D+ESA+ +F   S
Sbjct: 145 LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 204

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  + + +  +I   +  E+ E  + +F E++    +    T   +++ACA   A  +G 
Sbjct: 205 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 264

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+H  V+K   + +  V + L+ MY +   LE A + FD + D    +WNS++S +   G
Sbjct: 265 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHG 324

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSV 535
               A  +F +M    ++P+ IT+  LL+G    G  +  L     M ++ G  P     
Sbjct: 325 LGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY 384

Query: 536 SVVLQAVTELRLLKYGRE 553
           S V+  +     LK  +E
Sbjct: 385 SCVIDLLGRAGRLKEAKE 402


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/813 (30%), Positives = 413/813 (50%), Gaps = 96/813 (11%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK- 393
            ++N Y K   +  A +LF  +    D   WN ++    ++ ++  +++ F  M  S    
Sbjct: 77   MLNGYAKLGRLSDAVELFGRMP-ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSW 135

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
              + T+   +++C  +G      Q+   V K   + +  V   L+ M+ R   ++LA+R+
Sbjct: 136  PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRL 195

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F  +K+  +   NSM++ Y     VD A  LF+ M     + D+++WN ++S     G  
Sbjct: 196  FVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP----ERDVVSWNMMVSALSQSGRV 251

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            +  L ++  MQS G R + ++ +  L A   L  L++G++ H  ++RN    D YV ++L
Sbjct: 252  REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASAL 311

Query: 574  MDM-------------------------------YVKNDCLQNAQEVFDNMKN------- 595
            +++                               +++  C   + E+F+ M+        
Sbjct: 312  VELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 371

Query: 596  --------------------------------RNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
                                            + +V  NSLIS Y       +A+ +   
Sbjct: 372  FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRF 431

Query: 624  MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            M E+    D+VSW S+++ YS  G   +A      M       NV+TW +++   +Q+  
Sbjct: 432  MNEK----DIVSWTSMITAYSQVGNVAKAREFFDGMSEK----NVITWNAMLGAYIQHGA 483

Query: 684  YRESLKFF-IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              + L+ + + + +E ++P+  T  +L + C  LG  + G +I    +K G I D  VA 
Sbjct: 484  EEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN 543

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             +I MYSK G +  AR+VF     K + SWN MI G++ +G GK+AI +F ++L+ G +P
Sbjct: 544  AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKP 603

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D I++ A+L+ C +SGLV+EG  YFD M   +NI P +EH+SCMVDLLG+AG+L EA D 
Sbjct: 604  DYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDL 663

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MP KP A +WGALL +C+IHG+ E AE+A++ +F+L+  +S +Y LM  + A + + 
Sbjct: 664  IDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKS 723

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            +D  ++R  M + G+K    +SW+++D  VHVF A+   HP    I  +L  L+ ++ +L
Sbjct: 724  DDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARL 783

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYV             +  +  + H+EKLA+ +GLM   +  PI ++KN R+C DCHT  
Sbjct: 784  GYV-----------RTDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVI 832

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K +S V GRE  +RD  RFHHF  G CSC D W
Sbjct: 833  KLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 221/446 (49%), Gaps = 10/446 (2%)

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G V+E L++  ++  KGV   S   T  L  C +L +   G ++HA +I+     D 
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           ++  AL+  Y K    + A  +F+ + D  +++ W  +I   L+   +  +++LF +M+ 
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHD-RNNVAWTVLISGFLQYGCFTESVELFNQMRA 364

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                    +  ++  C        G+Q+H   LKS     + V N LISMY++ + L+ 
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  +F  M + ++ SW SMI++Y+ +G V  A   F+ M+    + ++ITWN +L  +  
Sbjct: 425 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQ 480

Query: 510 HGSYQNVLTLLRGMQSLGF-RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
           HG+ ++ L + + M S  + RP+  +   + +   +L   K G +  G  ++ GL  D  
Sbjct: 481 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 540

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           V  +++ MY K   +  A++VFD +  ++IV+WN++I+GY   G+   A ++ + + +  
Sbjct: 541 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 600

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRES 687
            KPD +S+ +++SG S  G  +E       MK +  I P +  ++ ++    +  +  E+
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEA 660

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTC 713
                 M    +KP +    +LL  C
Sbjct: 661 KDLIDDMP---MKPTAEVWGALLSAC 683



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 189/423 (44%), Gaps = 45/423 (10%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A+++     L++C   GA    + +HG ++   L S + + N L+  Y     L  A R+
Sbjct: 2   AVTQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRL 61

Query: 454 FDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
                 H N+ + N M++ Y  LG +  A  LF +M +     D+ +WN L+SG+F    
Sbjct: 62  LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR----DVASWNTLMSGYFQSRQ 117

Query: 513 YQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
           Y   L     M   G   PN  +++  +++   L       +    + +     D  V  
Sbjct: 118 YLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAA 177

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DM+V+   +  A  +F  +K   +   NS+++GY       +A ++ + M E     
Sbjct: 178 ALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPER---- 233

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           D+VSWN +VS  S  G+ +EAL ++  M++ G                            
Sbjct: 234 DVVSWNMMVSALSQSGRVREALDMVVDMQSKG---------------------------- 265

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
                  ++ +STT +S L  C  L  L+ GK++H   ++N    D YVA+ L+++Y+KS
Sbjct: 266 -------VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKS 318

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G  K A+ VF    ++   +W  +I GF  YG   E++ LF+++       D      L+
Sbjct: 319 GCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLI 378

Query: 812 AAC 814
           + C
Sbjct: 379 SGC 381


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/579 (37%), Positives = 327/579 (56%), Gaps = 40/579 (6%)

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE-LRLLKYGRESHG 556
            + WN L+SGH   G +         M   G  P   +   VL A  +  R +  G + HG
Sbjct: 88   VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147

Query: 557  YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
             ++ +G+  DL V  +L+DMY +   + +A +VFD M+ R++V                 
Sbjct: 148  RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVV----------------- 190

Query: 617  AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                              SW SL+SG +  GQ  EA  +   M       + V+WT++I 
Sbjct: 191  ------------------SWTSLLSGLARLGQVDEARDLFDRMPER----DTVSWTAMID 228

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G +    +RE+L+ F +MQ  ++  +  TM S++  C  LG L+ G+ +     + G   
Sbjct: 229  GYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKM 288

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            DA+V   LIDMYSK G+++ A +VF+   ++   +W  +I+G A+ G  +EAI +FH ++
Sbjct: 289  DAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMI 348

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
                 PD +TF  +L AC ++GLV++G ++F SM   YNI P + HY C++DLLG+AG +
Sbjct: 349  RVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKI 408

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
             EA D I  MP  P++TIWG LL +CR+HG+ E  E+ + RL +L+P NS  Y L+ N+ 
Sbjct: 409  TEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIY 468

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A  NRWEDV RLRH++ E G+K     S I++D I+H F A    HP + EIY +L  ++
Sbjct: 469  AKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESII 528

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
            S++  +GY PD   V+ ++ E+EK KVL  H+EKLAI + L+ +K    IR++KN R+C 
Sbjct: 529  SDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCL 588

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            DCH A K +S + GRE+ +RD  RFHHFR G CSC D W
Sbjct: 589  DCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 188/400 (47%), Gaps = 12/400 (3%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VHA +++ G   + H+  +L+  Y    D  +A  L   V + +  + WN +I    R  
Sbjct: 45  VHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARAL---VGECDTPVAWNALISGHNRGG 101

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAK-VGAFHEGKQIHGYVLKSALESNLSVC 434
           ++  +   F +M  + A     T V +L AC K       G Q+HG V+ S +  +L V 
Sbjct: 102 RFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVE 161

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L+ MY+    +  A +VFD M+  ++ SW S++S    LG VD A  LF++M     +
Sbjct: 162 NALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMP----E 217

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            D ++W  ++ G+     ++  L + R MQ      +  ++  V+ A  +L  L+ G   
Sbjct: 218 RDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWV 277

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
             Y+ R G+  D +VG +L+DMY K   ++ A +VF  M +R+   W ++I G    G  
Sbjct: 278 RVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYE 337

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG-QSKEALVIIHHMKNSGIYPNVVTWTS 673
             A +M ++M      PD V++  +++  +  G   K     +  ++   I PNVV +  
Sbjct: 338 EEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGC 397

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +I    +     E+L    QM    + PNST   +LL  C
Sbjct: 398 IIDLLGRAGKITEALDTIDQMP---MTPNSTIWGTLLAAC 434



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 30/225 (13%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS------------------ 353
           LG++VH  ++  G   D+ ++ AL++ Y +C D+ SA K+F                   
Sbjct: 141 LGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLA 200

Query: 354 ------EVSDL------EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
                 E  DL       D + W  +I   +   ++  A+++FREMQ+S+  A   T+V 
Sbjct: 201 RLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVS 260

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           ++ ACA++GA   G+ +  Y+ +  ++ +  V N LI MYS+   +E A  VF  M   +
Sbjct: 261 VITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRD 320

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             +W ++I      GY + A  +F++M      PD +T+  +L+ 
Sbjct: 321 KFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTA 365



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 48/234 (20%)

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQT----CGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
           +++  + +M     +P++ T  +LL+      GG G     + +H   ++ G  ++A+VA
Sbjct: 2   DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
           + L+  Y+  G+  +AR +  +    T  +WN +I G    G   E+   F ++   G  
Sbjct: 62  SSLVAAYTAGGDGAAARALVGEC--DTPVAWNALISGHNRGGRFGESCGSFVDMARAGAA 119

Query: 802 PDAITFTALLAACK-----------------NSGLVEE-------------------GWK 825
           P  +T+ ++L+AC                   SG++ +                    WK
Sbjct: 120 PTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWK 179

Query: 826 YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            FD M      + ++  ++ ++  L + G +DEA D    MP + D   W A++
Sbjct: 180 VFDGMQ-----VRSVVSWTSLLSGLARLGQVDEARDLFDRMPER-DTVSWTAMI 227


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/751 (31%), Positives = 391/751 (52%), Gaps = 74/751 (9%)

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS-VCNCLISMYSRNNKLELA 450
            ++ +S     +L A A+    H    +H  +L++      + + N L++ Y +  +   A
Sbjct: 2    SRPLSSQYAALLSAAARTEP-HVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARA 60

Query: 451  TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             RVFD+M   NL ++N+++S+      +    +LF  M     Q DI+++N +++G    
Sbjct: 61   RRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMT----QRDIVSYNAVIAGFSGG 116

Query: 511  GSYQNV----LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            GS+       L LL+   S+  RP+  ++S ++ A + L     G++ H  ILR G   +
Sbjct: 117  GSHAQAVRVYLALLQADSSV--RPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGAN 174

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV--------------------------- 599
             +VG+ L+DMY K   + +A+  FD + ++N+V                           
Sbjct: 175  AFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTD 234

Query: 600  ----AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG---YSIWGQSKEA 652
                 W ++++G+   GL   A ++  +M  + I  D  ++ S+++     S   Q K+ 
Sbjct: 235  RDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQI 294

Query: 653  -LVIIHHMKNSGIY---------------------------PNVVTWTSLISGSLQNENY 684
               II    +  ++                            N+++WT+LI G  QN   
Sbjct: 295  HAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCS 354

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+++ F +MQ++ I P+  T+ S++ +C  L  L+ G + HCL L +G +    V+  L
Sbjct: 355  EEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNAL 414

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            + +Y K G+++ A  +F + +     SW  ++ G+A +G  KE I LF ++L  G +PD 
Sbjct: 415  VTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDG 474

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF  +L+AC  +G VE+G  YF SM  D+ I+P  +HY+CM+DL  ++G L EA +FI+
Sbjct: 475  VTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIK 534

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP  PDA  WG LL +CR+ G +E  + A+  L +++P N A+Y L+ ++ A   +W +
Sbjct: 535  QMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNE 594

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V +LR  M +  VK     SWI+    VH+FSA+   HP +  IY +L  L S+M + GY
Sbjct: 595  VAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGY 654

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PD   V  D+ + +K  ++  H+EKLAI +GL+      PIR++KN RVC DCH A K+
Sbjct: 655  KPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKF 714

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S + GR+I +RD  RFH F +G CSC D W
Sbjct: 715  ISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 235/526 (44%), Gaps = 77/526 (14%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSA 392
           AL++     R +     LF+ ++   D + +N +I           A++++  + Q  S+
Sbjct: 77  ALLSTLAHARLLSDMEALFASMTQ-RDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSS 135

Query: 393 KAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
              SR T+  M+ A + +G    GKQ H  +L+    +N  V + L+ MY++ + +  A 
Sbjct: 136 VRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAK 195

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           R FD +   N+  +N+MI+       V+ A  LF  M       D ITW  +++G   +G
Sbjct: 196 RAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDR----DSITWTTMVTGFTQNG 251

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                L + R M+  G   +  +   +L A   L  L+ G++ H YI+R   D +++VG+
Sbjct: 252 LESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGS 311

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DMY K   ++ A+ VF  M  +NI++W +LI GY   G    A ++ ++M+ + I P
Sbjct: 312 ALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371

Query: 632 DLVSWNS---------------------LVSGYSIWGQSKEALVII----------HHMK 660
           D  +  S                     LVSG   +     ALV +          H + 
Sbjct: 372 DDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
           +   + + V+WT+L+SG  Q    +E++  F +M  + +KP+  T   +L  C   G ++
Sbjct: 432 DEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVE 491

Query: 721 NGKE-IHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
            G+   H +   +G   I D Y  T +ID+YS+SG LK A E  +               
Sbjct: 492 KGRSYFHSMQKDHGIVPIDDHY--TCMIDLYSRSGKLKEAEEFIK--------------- 534

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
                              +    PDAI +  LL+AC+  G +E G
Sbjct: 535 -------------------QMPMHPDAIGWGTLLSACRLRGDMEIG 561



 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 214/501 (42%), Gaps = 72/501 (14%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGV 314
           R    +++ +  +   G   Q +      L     +  SRI ++ ++   + L    LG 
Sbjct: 101 RDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGK 160

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGK-------------------------------CR 343
           + H  +++ GF  +  +   L++ Y K                               C+
Sbjct: 161 QFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCK 220

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            VE A +LF  ++D  D + W  ++    +N     A+++FR M+F        T   +L
Sbjct: 221 MVEEARRLFEVMTD-RDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSIL 279

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            AC  + A  +GKQIH Y++++  + N+ V + L+ MYS+   ++LA  VF  M   N+ 
Sbjct: 280 TACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNII 339

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           SW ++I  Y   G  + A  +F++M    I PD           +T GS           
Sbjct: 340 SWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPD----------DYTLGS----------- 378

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                         V+ +   L  L+ G + H   L +GL + + V  +L+ +Y K   +
Sbjct: 379 --------------VISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSI 424

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
           ++A  +FD M   + V+W +L+SGY   G       +  +M  + +KPD V++  ++S  
Sbjct: 425 EDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSAC 484

Query: 644 SIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           S  G  ++     H M K+ GI P    +T +I    ++   +E+ +F  QM    + P+
Sbjct: 485 SRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMP---MHPD 541

Query: 703 STTMSSLLQTCGGLGLLQNGK 723
           +    +LL  C   G ++ GK
Sbjct: 542 AIGWGTLLSACRLRGDMEIGK 562



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 222/520 (42%), Gaps = 55/520 (10%)

Query: 157 QNRHSHKPNSITNSPTSLALPP--TDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKH 214
           Q   S +P+ IT S   +A        L KQ     +  GF      N F   S +   +
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGF----GANAF-VGSPLVDMY 185

Query: 215 AQMIKMGKIWNSDDMVKS--------LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           A+M  +G    + D V S        +I   L       A + F +   R    W++ + 
Sbjct: 186 AKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVT 245

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            +   G E  E LE++  +  +G+         IL  C  L A   G ++HA +I+  +D
Sbjct: 246 GFTQNGLE-SEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYD 304

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            +V +  AL++ Y KCR ++ A  +F  ++  ++ + W  +I+   +N   E A+++F E
Sbjct: 305 DNVFVGSALVDMYSKCRSIKLAETVFRRMT-CKNIISWTALIVGYGQNGCSEEAVRVFSE 363

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           MQ         T+  ++ +CA + +  EG Q H   L S L   ++V N L+++Y +   
Sbjct: 364 MQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGS 423

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +E A R+FD M  H+  SW +++S Y   G       LF KM +  ++PD +T+      
Sbjct: 424 IEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTF------ 477

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                     + +L      GF   G S    +Q            + HG +  +    D
Sbjct: 478 ----------IGVLSACSRAGFVEKGRSYFHSMQ------------KDHGIVPID----D 511

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKG-LFVNAKKMLNQM 624
            Y  T ++D+Y ++  L+ A+E    M  + + + W +L+S    +G + +      N +
Sbjct: 512 HY--TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLL 569

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           E +   P   S+  L S ++  GQ  E   +   M++  +
Sbjct: 570 EIDPQNP--ASYVLLCSMHAAKGQWNEVAQLRRGMRDRQV 607


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/813 (30%), Positives = 413/813 (50%), Gaps = 96/813 (11%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK- 393
            ++N Y K   +  A +LF  +    D   WN ++    ++ ++  +++ F  M  S    
Sbjct: 97   MLNGYAKLGRLSDAVELFGRMP-ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSW 155

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
              + T+   +++C  +G      Q+   V K   + +  V   L+ M+ R   ++LA+R+
Sbjct: 156  PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRL 215

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F  +K+  +   NSM++ Y     VD A  LF+ M     + D+++WN ++S     G  
Sbjct: 216  FVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP----ERDVVSWNMMVSALSQSGRV 271

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            +  L ++  MQS G R + ++ +  L A   L  L++G++ H  ++RN    D YV ++L
Sbjct: 272  REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASAL 331

Query: 574  MDM-------------------------------YVKNDCLQNAQEVFDNMKN------- 595
            +++                               +++  C   + E+F+ M+        
Sbjct: 332  VELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 391

Query: 596  --------------------------------RNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
                                            + +V  NSLIS Y       +A+ +   
Sbjct: 392  FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRF 451

Query: 624  MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            M E+    D+VSW S+++ YS  G   +A      M       NV+TW +++   +Q+  
Sbjct: 452  MNEK----DIVSWTSMITAYSQVGNVAKAREFFDGMSE----KNVITWNAMLGAYIQHGA 503

Query: 684  YRESLKFF-IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              + L+ + + + +E ++P+  T  +L + C  LG  + G +I    +K G I D  VA 
Sbjct: 504  EEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN 563

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             +I MYSK G +  AR+VF     K + SWN MI G++ +G GK+AI +F ++L+ G +P
Sbjct: 564  AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKP 623

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D I++ A+L+ C +SGLV+EG  YFD M   +NI P +EH+SCMVDLLG+AG+L EA D 
Sbjct: 624  DYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDL 683

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MP KP A +WGALL +C+IHG+ E AE+A++ +F+L+  +S +Y LM  + A + + 
Sbjct: 684  IDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKS 743

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            +D  ++R  M + G+K    +SW+++D  VHVF A+   HP    I  +L  L+ ++ +L
Sbjct: 744  DDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARL 803

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYV             +  +  + H+EKLA+ +GLM   +  PI ++KN R+C DCHT  
Sbjct: 804  GYV-----------RTDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVI 852

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K +S V GRE  +RD  RFHHF  G CSC D W
Sbjct: 853  KLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 221/446 (49%), Gaps = 10/446 (2%)

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G V+E L++  ++  KGV   S   T  L  C +L +   G ++HA +I+     D 
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           ++  AL+  Y K    + A  +F+ + D  +++ W  +I   L+   +  +++LF +M+ 
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLHD-RNNVAWTVLISGFLQYGCFTESVELFNQMRA 384

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                    +  ++  C        G+Q+H   LKS     + V N LISMY++ + L+ 
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 444

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  +F  M + ++ SW SMI++Y+ +G V  A   F+ M+    + ++ITWN +L  +  
Sbjct: 445 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQ 500

Query: 510 HGSYQNVLTLLRGMQSLGF-RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
           HG+ ++ L + + M S  + RP+  +   + +   +L   K G +  G  ++ GL  D  
Sbjct: 501 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 560

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           V  +++ MY K   +  A++VFD +  ++IV+WN++I+GY   G+   A ++ + + +  
Sbjct: 561 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 620

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRES 687
            KPD +S+ +++SG S  G  +E       MK +  I P +  ++ ++    +  +  E+
Sbjct: 621 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEA 680

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTC 713
                 M    +KP +    +LL  C
Sbjct: 681 KDLIDDMP---MKPTAEVWGALLSAC 703



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 191/427 (44%), Gaps = 45/427 (10%)

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           +S  A+++     L++C   GA    + +HG ++   L S + + N L+  Y     L  
Sbjct: 18  ASHMAVTQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSD 77

Query: 450 ATRVFDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           A R+      H N+ + N M++ Y  LG +  A  LF +M +     D+ +WN L+SG+F
Sbjct: 78  ARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR----DVASWNTLMSGYF 133

Query: 509 THGSYQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
               Y   L     M   G   PN  +++  +++   L       +    + +     D 
Sbjct: 134 QSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDS 193

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            V  +L+DM+V+   +  A  +F  +K   +   NS+++GY       +A ++ + M E 
Sbjct: 194 EVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPER 253

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
               D+VSWN +VS  S  G+ +EAL ++  M++ G                        
Sbjct: 254 ----DVVSWNMMVSALSQSGRVREALDMVVDMQSKG------------------------ 285

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
                      ++ +STT +S L  C  L  L+ GK++H   ++N    D YVA+ L+++
Sbjct: 286 -----------VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVEL 334

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           Y+KSG  K A+ VF    ++   +W  +I GF  YG   E++ LF+++       D    
Sbjct: 335 YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFAL 394

Query: 808 TALLAAC 814
             L++ C
Sbjct: 395 ATLISGC 401


>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/777 (31%), Positives = 411/777 (52%), Gaps = 39/777 (5%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           R L      HA +IK G  +  +D V S L+  Y + G    A + F    S +   W++
Sbjct: 65  RALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAA 124

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +    +  G  +E L  + ++   G+   + +L  +LK C  L     G  VHA ++K 
Sbjct: 125 II-GLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKT 183

Query: 324 -GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
            G    V++  +L++ YGKC  VE A K+F E+S+  +D+ WN +++   +N   + AI+
Sbjct: 184 IGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSE-RNDVTWNSMVVTYAQNGMNQEAIR 242

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           +FREM+    +     +     ACA   A  EG+Q HG  +   LE +  + + +++ Y 
Sbjct: 243 VFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYF 302

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +   +E A  VF +M                                      D++TWN 
Sbjct: 303 KVGLIEEAEVVFRNMA-----------------------------------VKDVVTWNL 327

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           +++G+   G  +  L +   M+  G R +  ++S +L    + R L  G ++H Y ++N 
Sbjct: 328 VVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKND 387

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            + D+ V + ++DMY K   +  A+ VF  ++ ++IV WN++++    +GL   A K+  
Sbjct: 388 FEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFF 447

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
           QM+ E + P++VSWNSL+ G+   GQ  EA  +   M +SG+ PN++TWT+++SG +QN 
Sbjct: 448 QMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNG 507

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               ++  F +MQ   I+PNS +++S L  C  + LL++G+ IH   ++    +  ++ T
Sbjct: 508 FGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIIT 567

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            ++DMY+K G+L  A+ VF+  + K L  +N MI  +A +G  +EA++LF ++ + G  P
Sbjct: 568 SIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVP 627

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D IT T++L+AC + GL++EG K F  M ++  + P+ EHY C+V LL   G LDEA   
Sbjct: 628 DHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRT 687

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
           I TMP  PDA I G+LL +C  +  +E A+  ++ L KL+P NS NY  + N+ A   +W
Sbjct: 688 ILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKW 747

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
           + V  LR  M E G++ +   SWI++ Q +HVF A    HP T EIY  L  L  EM
Sbjct: 748 DKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIYVTLDLLGFEM 804



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 155/662 (23%), Positives = 289/662 (43%), Gaps = 103/662 (15%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH-- 330
           G ++E +    ++H   +     I   +L+ C    A  L +++HA +IKRG  F ++  
Sbjct: 30  GRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALNDF 89

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +   L+  Y KC   E A +LF + S   +   W  II +  R    E A+  + +MQ  
Sbjct: 90  VISKLVILYAKCGASEPATRLFRD-SPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQD 148

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLEL 449
                +  +  +L+AC  +     GK +H +V+K+  L+  + V   L+ MY +   +E 
Sbjct: 149 GLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVED 208

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VFD M + N  +WNSM+ +Y   G    A  +F +M    ++  ++     LSG FT
Sbjct: 209 AGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVA----LSGFFT 264

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
             +                           +AV E      GR+ HG  +  GL+ D  +
Sbjct: 265 ACANS-------------------------EAVGE------GRQGHGLAVVGGLELDNVL 293

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           G+S+M+ Y K   ++ A+ VF NM  +++V WN +++GY   G+   A +M   M EE +
Sbjct: 294 GSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGL 353

Query: 630 KPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMK-----NSGIY-------------- 665
           + D V+ ++L++  +     + G    A  + +  +     +SGI               
Sbjct: 354 RFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARR 413

Query: 666 -------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                   ++V W ++++   +     E+LK F QMQ E + PN  + +SL+        
Sbjct: 414 VFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLI-------- 465

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
                         GF K+  VA    +M++         E+        L +W  M+ G
Sbjct: 466 -------------FGFFKNGQVAEAR-NMFA---------EMCSSGVMPNLITWTTMMSG 502

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
               G G  A+++F E+ + G +P++++ T+ L+ C +  L++ G +         ++  
Sbjct: 503 LVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHG-RAIHGYVMRRDLSQ 561

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
           +I   + ++D+  K G LD A    +    K +  ++ A++ +   HG    A +  +++
Sbjct: 562 SIHIITSIMDMYAKCGSLDGAKCVFKMCSTK-ELYVYNAMISAYASHGQAREALVLFKQM 620

Query: 899 FK 900
            K
Sbjct: 621 EK 622



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 16/224 (7%)

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           + PN  + T   S   ++   RE++    QM   ++        +LLQ C     L    
Sbjct: 13  LTPNQFSLTHF-SSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLAL 71

Query: 724 EIHCLCLKNG--FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           ++H   +K G  F  + +V + L+ +Y+K G  + A  +FR S +  + SW  +I     
Sbjct: 72  QLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTR 131

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            G  +EA+  + ++ + G  PD      +L AC   G+++  W  F      + ++ TI 
Sbjct: 132 TGFCEEALFGYIKMQQDGLPPDNFVLPNVLKAC---GVLK--WVRFGKGVHAF-VVKTIG 185

Query: 842 HYSC------MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
              C      +VD+ GK G +++A      M  + D T W +++
Sbjct: 186 LKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVT-WNSMV 228


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/672 (34%), Positives = 358/672 (53%), Gaps = 48/672 (7%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS--SYTGLGYVDVAWSLFNKMNSSR 492
            N L++ Y RN   + A  +F  M   +L+S+N++IS  S       D A +L     S  
Sbjct: 52   NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAAL----ASIP 107

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
              P ++++  LL G+  HG   + + L + M       N  S +V+L       LL  GR
Sbjct: 108  FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGG-----LLDAGR 158

Query: 553  ESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
             +    L + + D D+   T+++  Y +   +  A+ +FD M  RN+V+W ++ISGY   
Sbjct: 159  VNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN 218

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP----- 666
            G    A+K+   M E     + VSW +++ GY   G  ++A  + + M    +       
Sbjct: 219  GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMM 274

Query: 667  ----------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                  +  TW+++I    QNE   E+L  F +M    ++PN  
Sbjct: 275  VGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP 334

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            ++ S+L  C  L +L  G+E+H   L+  F  D +  + LI MY K GNL  A+ VF   
Sbjct: 335  SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K +  WN MI G+A +G G++A+ +FH++   G  PD IT+   L AC  +G V+EG 
Sbjct: 395  EPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGR 454

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            + F+SM+ + +I P  EHYSCMVDLLG++G ++EA+D I+ MP +PDA IWGAL+G+CR+
Sbjct: 455  EIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRM 514

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H + E AE+A+++L +LEP N+  Y L+ ++     RWED  ++R  +    +      S
Sbjct: 515  HRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCS 574

Query: 945  WIQIDQIVHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            WI+ D+ VH+F S +   HP    I   L  L   + + GY  D   V  DIDEE+K   
Sbjct: 575  WIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHS 634

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+E+ A+ YGL+K     PIRV+KN RVC DCH+A K ++ +  REI LRD  RFHH
Sbjct: 635  LRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHH 694

Query: 1064 FREGECSCNDCW 1075
            F++G CSC D W
Sbjct: 695  FKDGFCSCRDYW 706



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEV---QELLEVWGELHGK 288
           +++  Y + G  T A   F     R+   W++ +  Y    GEV   ++L EV  E   +
Sbjct: 179 AMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQ-NGEVNLARKLFEVMPE---R 234

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
             +  + +L   ++           VE  A L     +  V    A+M  +G+   V++A
Sbjct: 235 NEVSWTAMLVGYIQAGH--------VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAA 286

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F ++ +  DD  W+ +I    +NE    A+  FREM +   +    +++ +L  CA 
Sbjct: 287 KTVFEKMRE-RDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +     G+++H  +L+ + + ++   + LI+MY +   L+ A RVF + +  ++  WNSM
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           I+ Y   G  + A  +F+ M  + + PD IT+
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 28/299 (9%)

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           ++ A+  F+ M  R   ++N+L++GY    L   A  +  +M       DL S+N+L+SG
Sbjct: 33  IEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR----DLASYNALISG 88

Query: 643 YSIWGQS-KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S+  Q+  +A   +  +      P+VV++TSL+ G +++    ++++ F QM +     
Sbjct: 89  LSLRRQTLPDAAAALASIP---FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER---- 141

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI-KDAYVATGLIDMYSKSGNLKSAREV 760
           N  + + LL      GLL  G+      L +    +D    T ++  Y ++G +  AR +
Sbjct: 142 NHVSYTVLLG-----GLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
           F +   + + SW  MI G+A  G     + L  +L E   + + +++TA+L     +G V
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGE----VNLARKLFEVMPERNEVSWTAMLVGYIQAGHV 252

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           E+  + F++M       P     + MV   G+ G +D A      M  + D T W A++
Sbjct: 253 EDAAELFNAMPEH----PVAACNAMMVG-FGQRGMVDAAKTVFEKMRERDDGT-WSAMI 305



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 6/229 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  + + G   +A   F     R    WS+ ++ YE     + E L  + E+  +GV 
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQ-NEFLMEALSTFREMLWRGVR 330

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  IL +C  L     G EVHA++++  FD DV    AL+  Y KC +++ A ++
Sbjct: 331 PNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRV 390

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F    + +D ++WN +I    ++   E A+ +F +M+ +       T +  L AC+  G 
Sbjct: 391 F-HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGK 449

Query: 412 FHEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
             EG++I +   + S++       +C++ +  R+  +E A   FD +K+
Sbjct: 450 VKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEA---FDLIKN 495


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/815 (30%), Positives = 411/815 (50%), Gaps = 67/815 (8%)

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
            F + I   +L+ C +      G  +H  +IK+G   D+     L+NFY K   +  A KL
Sbjct: 42   FNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKL 101

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F E+ D  + + +  +I    +  ++  AI LF  +Q                       
Sbjct: 102  FDEMPD-RNTVSFVTLIQGYSQCLRFSEAIGLFSRLQ----------------------- 137

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              EG +++ +V  + L+        L+S         +   V+    D +     ++I  
Sbjct: 138  -GEGHELNPFVFSTVLK-------LLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDC 189

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            Y+  GY + A  +F+ +       D+++W  +++ +  +  ++  L L   M+ +GF+PN
Sbjct: 190  YSVCGYAECARQVFDAIE----YKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPN 245

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              + + VL+A   L +   G+  HG   +     +L+VG  L+D+Y+K+  + +A +VF+
Sbjct: 246  NFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFE 305

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
             M   +++ W+ +I+ Y        A +M  +M    + P+  +  SL+   +     + 
Sbjct: 306  EMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQL 365

Query: 652  ALVIIHHMKNSGIYPNV-------------------------------VTWTSLISGSLQ 680
               I  H+   G+  NV                               V+W ++I G +Q
Sbjct: 366  GNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQ 425

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
              N  ++L  F  M +  ++    T SS+L+ C G+  L+ G +IH L +K  + K+  V
Sbjct: 426  AGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVV 485

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
               LIDMY+K GN+K AR VF         SWN MI G++++G   EA+  F  +LET  
Sbjct: 486  GNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETEC 545

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +PD +TF  +L+AC N+GL++ G  YF SM  +Y+I P  EHY+CMV LLG++G+LD+A 
Sbjct: 546  KPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAA 605

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
              +  +PF+P   +W ALL +C IH  +E   I+++R+ ++EP + A + L+ N+ A + 
Sbjct: 606  KLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANAR 665

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RW +V  +R SM   G++     SWI+    VH FS     HP T  I   L  L  + +
Sbjct: 666  RWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKAR 725

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
              GYVPD   V  D+++ +K + L  H+E+LA+ YGL++T S +P+R+IKN R+C+DCH 
Sbjct: 726  NEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHA 785

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            A K +S +  R+I +RD  RFHHF EG CSC D W
Sbjct: 786  AIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 163/672 (24%), Positives = 289/672 (43%), Gaps = 125/672 (18%)

Query: 189 SCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS--LIFHYLEFGDFTSA 246
           SCI +G C           ++ K  H ++IK G   N  D+  +  L+  Y+++     A
Sbjct: 53  SCIRNGDC-----------ATGKYLHCEIIKKG---NCLDLFANNILLNFYVKYDSLPDA 98

Query: 247 AKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTK 306
           AK F     R+   + + ++ Y S      E + ++  L G+G      + + +LKL   
Sbjct: 99  AKLFDEMPDRNTVSFVTLIQGY-SQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVS 157

Query: 307 LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNE 366
                LG  VHA + K GFD D  +  AL++ Y  C   E A ++F  + + +D + W  
Sbjct: 158 AEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI-EYKDMVSWTG 216

Query: 367 IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
           ++   + NE +E ++KLF  M+    K  + T   +L+AC  +  F+ GK +HG   K++
Sbjct: 217 MVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTS 276

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
               L V   LI +Y ++  ++ A +VF+ M   ++  W+ MI+ Y      + A  +F 
Sbjct: 277 YLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFC 336

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
           +M                                RG+      PN  +++ +LQA   L 
Sbjct: 337 RMR-------------------------------RGL----VLPNQFTLASLLQACASLV 361

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L+ G + H ++++ GLD +++V  +LMDMY K   ++N+ ++F    N   V+WN++I 
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIV 421

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------------ 636
           GY   G    A  +   M E +++   V++                              
Sbjct: 422 GYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDK 481

Query: 637 -----NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
                N+L+  Y+  G  K+A ++   ++      + V+W ++ISG   +  Y E+LK F
Sbjct: 482 NTVVGNALIDMYAKCGNIKDARLVFDMLREH----DQVSWNAMISGYSVHGLYGEALKTF 537

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             M + + KP+  T   +L  C   GLL  G+              AY  + +++ Y   
Sbjct: 538 ESMLETECKPDKVTFVGILSACSNAGLLDRGQ--------------AYFKS-MVEEY--- 579

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            +++   E            + CM+      G+  +A  L HE+    F+P  + + ALL
Sbjct: 580 -DIEPCAE-----------HYTCMVWLLGRSGHLDKAAKLVHEI---PFEPSVMVWRALL 624

Query: 812 AACKNSGLVEEG 823
           +AC     VE G
Sbjct: 625 SACVIHNDVELG 636


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/673 (34%), Positives = 364/673 (54%), Gaps = 79/673 (11%)

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            ++ GL Y   A S+F  +     +P+++ WN +  GH       + + L   M SLG  P
Sbjct: 49   NFDGLPY---AISVFETIQ----EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLP 101

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  +   +L++  +L++ K G++ HG++L+ G + DLYV TSL+ MYVKN   ++A +VF
Sbjct: 102  NSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVF 161

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ--------------------------- 623
            D   +R++V++ +LI+GY  +G   +A+KM ++                           
Sbjct: 162  DGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALD 221

Query: 624  ----MEEEEIKPD----------------------LVSW-------------NSLVSGYS 644
                M +  +KPD                      + SW             N+L+  YS
Sbjct: 222  LFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYS 281

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G+ + A  +   + N     +V++W ++I G      Y+E+L  F +M +    PN  
Sbjct: 282  KCGEVETACGLFQGLSNK----DVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDV 337

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
            TM S+L  C  LG +  G+ IH    K   G    + + T LIDMY+K G++++A +VF 
Sbjct: 338  TMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 397

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
               ++TL++ N MI GFA++G    A  +F  + + G +PD ITF  LL+AC +SG+++ 
Sbjct: 398  SMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 457

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G + F SM+ +Y I P +EHY CM+DLLG  G   EA + I TM  +PD  IW +LL +C
Sbjct: 458  GRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKAC 517

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            ++HG++E  E  +++L K+EP N  +Y L+ N+ A + RW +V  +R  +++ G+K V  
Sbjct: 518  KMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPG 577

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             S I+ID +VH F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K  
Sbjct: 578  CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQG 637

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RFH
Sbjct: 638  ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 697

Query: 1063 HFREGECSCNDCW 1075
            HFR+G CSCND W
Sbjct: 698  HFRDGVCSCNDYW 710



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 245/555 (44%), Gaps = 76/555 (13%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLE--FGDFTSAAKAFFLYFSRSYADWS 262
           + L S++  HAQMIK G    +  + + L F  L   F     A   F      +   W+
Sbjct: 13  KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWN 72

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIK 322
           +    + +   +    ++++  +   G++  S     +LK C KL     G ++H  ++K
Sbjct: 73  TMFRGH-ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLK 131

Query: 323 RGFDFDVHLKCALMNFY---GKCRD----------------------------VESANKL 351
            G++ D+++  +L++ Y   G+ +D                            +ESA K+
Sbjct: 132 LGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKM 191

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+  ++D + WN II         + A+ LF+EM  ++ K    T+V ++ ACA+ G+
Sbjct: 192 FDEIP-VKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS 250

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+Q+H ++    L SNL + N LI +YS+  ++E A  +F  + + ++ SWN+MI  
Sbjct: 251 IQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGG 310

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           YT L     A  LF +M  S                                   G  PN
Sbjct: 311 YTHLNLYKEALLLFQEMLRS-----------------------------------GENPN 335

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILR--NGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
             ++  +L A  +L  + +GR  H YI +   G+     + TSL+DMY K   ++ A +V
Sbjct: 336 DVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQV 395

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F++M +R + A N++I G+   G    A  + ++M +  I+PD +++  L+S  S  G  
Sbjct: 396 FNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGML 455

Query: 650 KEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                I   M +N  I P +  +  +I        ++E+ +    M  E   P+     S
Sbjct: 456 DLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTME---PDGVIWCS 512

Query: 709 LLQTCGGLGLLQNGK 723
           LL+ C   G ++ G+
Sbjct: 513 LLKACKMHGNVELGE 527


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative [Solanum
            demissum]
          Length = 819

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/769 (29%), Positives = 409/769 (53%), Gaps = 68/769 (8%)

Query: 339  YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
            Y K R++  A +LF  +    +++ W  +I    +N + + A  L+ EM  S  K    T
Sbjct: 87   YVKSRNLFRARELFESMFS-RNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHIT 145

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
               +L          E  QIH ++++    ++L V                         
Sbjct: 146  FATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIV------------------------- 180

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
                  +NS++ SY     +D+A  LF++M +     D +++N +++G+  +G  +  L 
Sbjct: 181  ------FNSLVDSYCKTCCLDIASQLFSEMPTK----DSVSFNVMITGYTKYGFREEALK 230

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
            L   M+++ F+P+G + + +L        + +G++ HG  ++    +D++V  +L+D Y 
Sbjct: 231  LFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYS 290

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
            K+D +  A+ +FD M   + V++N +I+GY + G +  +  +  +++          + +
Sbjct: 291  KHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFAT 350

Query: 639  LVSGYSI-----WGQSKEALVIIH------HMKNSGI--------------------YPN 667
            ++S  +I      G+   A  ++        + N+ +                    Y N
Sbjct: 351  MLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRN 410

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
             V WT++IS  +Q   + E+LK F +M +E++  +  T +S L+    L  +  GK++H 
Sbjct: 411  SVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHS 470

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              ++ G +   +  + L+DMY+  G++K A EVF++  ++ +  WN +I  ++  G+ + 
Sbjct: 471  SVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEA 530

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
                F +++E+G  PD+++F ++L AC + GLVE+   YF+SM+  Y + P  +HY+ M+
Sbjct: 531  TFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMI 590

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NS 906
            D+L ++G  +EA + I  MPF+PD  +W ++L SCRIH + + A+ A+ +LFK++   ++
Sbjct: 591  DVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDA 650

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            A Y  M N+ A + +WE+  +++ +M E GVK V  +SW++ID  VHVF+A    HP T 
Sbjct: 651  AAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTE 710

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
            +I  ++  LV  M K GY PDT C  Q++DEE K + L  H+E+LAI + L+ T   +PI
Sbjct: 711  QIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPI 770

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             ++KN R C DCH A K +S + GREI +RD +RFHHFR+G CSC D W
Sbjct: 771  IIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 200/450 (44%), Gaps = 40/450 (8%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
            G ++H   IK  + +D+ +  AL++FY K   ++ A  LF E+ +L D + +N II   
Sbjct: 262 FGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPEL-DGVSYNIIITGY 320

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             N ++E +  LF+ +Q +S    +     ML   A       G+Q H   + +   S +
Sbjct: 321 AWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEV 380

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N L+ MY++  K E A R+F ++   N   W ++IS Y   G+ + A  +F +MN  
Sbjct: 381 QVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRE 440

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
            +  D  T+                                   +  L+A   L  +  G
Sbjct: 441 NVHGDQATF-----------------------------------ASTLKASANLASVSLG 465

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           ++ H  ++R GL   ++ G+ L+DMY     +++A EVF  M +RNIV WN+LIS Y   
Sbjct: 466 KQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQN 525

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVT 670
           G           M E  + PD VS+ S+++  S  G  ++AL   + M     + P    
Sbjct: 526 GDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKH 585

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           + ++I    ++  + E+     +M  E   P+    SS+L +C         K+      
Sbjct: 586 YATMIDVLCRSGRFNEAENLISEMPFE---PDEVMWSSVLNSCRIHKNQDLAKKAADQLF 642

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           K   ++DA     + ++Y+++G  ++A +V
Sbjct: 643 KMDALRDAAAYVNMSNIYAEAGKWENAAKV 672



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 223/529 (42%), Gaps = 78/529 (14%)

Query: 230 VKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
           V  ++  Y++  +   A + F   FSR+   W+  +  Y S   + +E   ++ E+   G
Sbjct: 80  VNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGY-SQNNQPKEAFNLYTEMCRSG 138

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
           V         +L            +++H+ +I+ GF   + +  +L++ Y K   ++ A+
Sbjct: 139 VKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIAS 198

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           +LFSE+   +D + +N +I    +    E A+KLF +M+    +    T   ML      
Sbjct: 199 QLFSEMP-TKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGS 257

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
                G+QIHG  +K++   ++ V N L+  YS+++ ++LA  +FD M + +  S+N +I
Sbjct: 258 EDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIII 317

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF- 528
           + Y                           WN         G Y+    L + +Q   F 
Sbjct: 318 TGY--------------------------AWN---------GQYEKSFDLFKRLQGTSFD 342

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           R N    +++  A  EL  L  GR++H   +      ++ VG +L+DMY K +  ++A  
Sbjct: 343 RKNFPFATMLSVAAIELN-LSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANR 401

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS---------- 638
           +F N+  RN V W ++IS Y  KG    A KM  +M  E +  D  ++ S          
Sbjct: 402 IFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLAS 461

Query: 639 -------------------------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                                    LV  Y+  G  K+A+ +   M +     N+V W +
Sbjct: 462 VSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDR----NIVCWNA 517

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           LIS   QN +   +   F  M +  + P+S +  S+L  C   GL++  
Sbjct: 518 LISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKA 566



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 187/425 (44%), Gaps = 17/425 (4%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR-SYADWSSFLEDYESFG 272
           H   IK   +W  D  V + +  +    D+   AK  F          ++  +  Y ++ 
Sbjct: 267 HGLAIKTSYVW--DIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGY-AWN 323

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+ ++  +++  L G     ++     +L +    +   +G + HA  +      +V + 
Sbjct: 324 GQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVG 383

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KC   E AN++F+ ++   + + W  II + ++    E A+K+F+EM   + 
Sbjct: 384 NALVDMYAKCEKFEDANRIFANLA-YRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENV 442

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                T    L+A A + +   GKQ+H  V++  L S++   + L+ MY+    ++ A  
Sbjct: 443 HGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIE 502

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VF  M D N+  WN++IS+Y+  G  +  +S F  M  S + PD +++  +L+     G 
Sbjct: 503 VFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGL 562

Query: 513 YQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGR--ESHGYILRNGLDYDLYV 569
            +  L     M Q     P     + ++       L + GR  E+   I     + D  +
Sbjct: 563 VEKALWYFNSMTQVYKLDPRRKHYATMIDV-----LCRSGRFNEAENLISEMPFEPDEVM 617

Query: 570 GTSLMD---MYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            +S+++   ++   D  + A +    M   R+  A+ ++ + Y   G + NA K+   M 
Sbjct: 618 WSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMR 677

Query: 626 EEEIK 630
           E  +K
Sbjct: 678 ERGVK 682



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 40/310 (12%)

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           I++ G D ++      +   V+ + +  A+++FD M  RN  + N ++SGY        A
Sbjct: 37  IVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRA 96

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
           +++   M                                          N V+WT +I G
Sbjct: 97  RELFESM---------------------------------------FSRNEVSWTIMIGG 117

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             QN   +E+   + +M +  +KP+  T ++LL        L+   +IH   ++ GF   
Sbjct: 118 YSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSAS 177

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             V   L+D Y K+  L  A ++F +   K   S+N MI G+  YG  +EA+ LF ++  
Sbjct: 178 LIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRN 237

Query: 798 TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             FQP   TF A+L     S  V  G +    ++   + +  I   + ++D   K  Y+D
Sbjct: 238 MDFQPSGFTFAAMLGMSVGSEDVIFG-QQIHGLAIKTSYVWDIFVANALLDFYSKHDYID 296

Query: 858 EAWDFIRTMP 867
            A +    MP
Sbjct: 297 LAKNLFDEMP 306


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 278/914 (30%), Positives = 446/914 (48%), Gaps = 82/914 (8%)

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
            L+  +  H Q++K G   N D +   L+  Y +      A  AF    SR  A W++ + 
Sbjct: 40   LAQGRQLHRQIVKQGLARN-DLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIA 98

Query: 267  DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIK---R 323
               S          +  E   +    R  I+ ++  + +   +        A ++    R
Sbjct: 99   AQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIR 158

Query: 324  GFDF--DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN-EKWENA 380
            G D   D+ +  AL++ YGKC  VESA ++FS +  + D + WN  IM    N E+ + A
Sbjct: 159  GSDLERDLFVATALLDAYGKCGCVESALEVFSRIQ-VPDLICWNAAIMACAGNDERPDRA 217

Query: 381  IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
            + L R M          + V +L +C    +    + IH  V +     ++ V   L++M
Sbjct: 218  LLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTM 277

Query: 441  YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
            Y R   ++ +  VF++M   N  SWN+MI+++   G+   A++++              W
Sbjct: 278  YGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIY--------------W 323

Query: 501  NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES--HGYI 558
                                  MQ  GFRPN  +    L+A         G  +  HG+I
Sbjct: 324  R---------------------MQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWI 362

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
               GL+ D+ VGT+L+ MY     +  A+  FD +  +NIV+WN++++ Y   G    A 
Sbjct: 363  ACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAM 422

Query: 619  KMLNQMEEEEIKPDLVSW----------------NSLVSGYSIWGQ-SKEALVIIHHMKN 661
            ++   M+ + + P+ VS+                ++ V G  ++ Q S  A  ++     
Sbjct: 423  ELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFAR 482

Query: 662  SG------------IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
            SG            +  + V+W + ++     E+   ++  F  MQ E  +P+  T+ S+
Sbjct: 483  SGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSV 542

Query: 710  LQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYSKSG-NLKSAREVFRKSAN- 766
            +  C  LG L+ G+ I   L       +D  V + +++M +K G ++     +F +  + 
Sbjct: 543  VDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDD 602

Query: 767  -KTLASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEGW 824
             K L +WN MI  +A +G+G++A+ LF  + + +  +PD+ TF ++L+ C ++GLVE+G 
Sbjct: 603  RKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGI 662

Query: 825  KYFDSMSTDYNI-IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
              F        I    +EHY+C+VD+LG+ GYL EA DFIR MP   D+ +W +LLG+C 
Sbjct: 663  HCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACS 722

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
             +G LE  E A+R   +L   +S  Y ++ N+ A + RWED  R+R  M E  VK     
Sbjct: 723  SYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPG 782

Query: 944  -SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             S I +   VH F A    HP + EIY EL  L   +++ GYVPDTR V  D++EE+K +
Sbjct: 783  KSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQ 842

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            +L  H+EKLAI +GL+    R  IRVIKN RVC DCHTA K+++ V  REI +RD  RFH
Sbjct: 843  LLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFH 902

Query: 1063 HF-REGECSCNDCW 1075
            HF ++GECSC D W
Sbjct: 903  HFGKDGECSCGDYW 916



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/463 (22%), Positives = 189/463 (40%), Gaps = 83/463 (17%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+  +L+ C       +G+Q+H  ++K  L  N  + N L+ MYS+   L+ A   F ++
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
           +   +++WN++I++ +    V   + L+ +M       +                     
Sbjct: 86  RSRGIATWNTLIAAQSSPAAV---FDLYTRMKLEERAEN--------------------- 121

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTE------LRLLKYGRESHGYILRNGLDYDLYVGT 571
                      RPN  ++  VL A+               R  H  I  + L+ DL+V T
Sbjct: 122 -----------RPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVAT 170

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS-----------------LISGYCFKGLF 614
           +L+D Y K  C+++A EVF  ++  +++ WN+                 L+     +GL 
Sbjct: 171 ALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLL 230

Query: 615 VN-------------------AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            N                   A+ +  ++EE     D+V   +LV+ Y   G   E++ +
Sbjct: 231 PNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAV 290

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT-MSSLLQTCG 714
              M       N V+W ++I+   Q  +   +   + +MQQE  +PN  T +++L   C 
Sbjct: 291 FEAMA----VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACS 346

Query: 715 GLGL-LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
                L     +H      G   D  V T L+ MY  +G +  AR  F     K + SWN
Sbjct: 347 SSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWN 406

Query: 774 CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            M+  +   G  +EA+ LF  +      P+ +++ A+L  C++
Sbjct: 407 AMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED 449



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 20/190 (10%)

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T++ LL+ C G   L  G+++H   +K G  ++  +   L+ MYSK  +L  A   F   
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 765 ANKTLASWNCMIMG-------FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            ++ +A+WN +I         F +Y   K       E  E   +P+ +T  A+L A  + 
Sbjct: 86  RSRGIATWNTLIAAQSSPAAVFDLYTRMK-----LEERAEN--RPNRLTIIAVLGAIASG 138

Query: 818 GLVEEGWKYFDSMSTDYNIIPT-IEH----YSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
                      +     +I  + +E      + ++D  GK G ++ A +    +   PD 
Sbjct: 139 DPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDL 197

Query: 873 TIWGALLGSC 882
             W A + +C
Sbjct: 198 ICWNAAIMAC 207


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 272/877 (31%), Positives = 430/877 (49%), Gaps = 80/877 (9%)

Query: 142 LHSIYHHFNTRTSIN-QNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNE 200
           L SIY  F   T+   ++ H++  N     P   ++   D+LA Q            L  
Sbjct: 6   LSSIYKCFLPSTTFKLKSFHTNSVN--IGKPLQFSIHNDDSLAPQL--------VSILQT 55

Query: 201 TNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD 260
                 LS  +  HAQM+  G  +N     K L+  Y+  G F  A   F+         
Sbjct: 56  CTDPSGLSQGRQAHAQMLVNGIGYNGILGTK-LLGMYVLCGAFLDAKNIFYQLRLWCSEP 114

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+  +  + +  G+    L  + ++ G G +        ++K C  L +  LG  VH  +
Sbjct: 115 WNWMIRGF-TMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKI 173

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
              GF+ DV +  +L+ FY +   +  A  LF  +   +D +LWN ++   ++N  W+NA
Sbjct: 174 QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPS-KDGVLWNVMLNGYVKNGDWDNA 232

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
             +F EM+ +     S T   +L  CA     + G Q+HG V+ S LE +  V N L++M
Sbjct: 233 TGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAM 292

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y++   L  A R+FD M                                    + D++TW
Sbjct: 293 YAKCGHLFDARRLFDMMP-----------------------------------KTDLVTW 317

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
           N ++SG+  +G       L   M S   +P+  + S  L  ++E   L+ G+E H YI+R
Sbjct: 318 NGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIR 377

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
           NG+  D+++ ++L+D+Y K   ++ A+++FD     +IV   ++ISGY   G+  NA ++
Sbjct: 378 NGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEI 437

Query: 621 LNQMEEEEIKPDLVSWNSLVS----------GYSIWGQ--------------------SK 650
              + +E ++ + V+  S++           G  + G                     +K
Sbjct: 438 FRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAK 497

Query: 651 EALVIIHHMKNSGIY-PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
              + + H    GI   + V W S+I+   QN    E++  F QM     K +  ++S+ 
Sbjct: 498 CGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAA 557

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           L  C  L  L  GKEIH   ++  F  D +  + LIDMYSK GNL  A  VF     K  
Sbjct: 558 LSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNE 617

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS 829
            SWN +I  +  +G  K+++ LFH +L  G QPD +TF A+++AC ++G V+EG  YF  
Sbjct: 618 VSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRC 677

Query: 830 MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLE 889
           M+ +  I+  +EHY+CMVDL G+AG L+EA+  I +MPF PDA +WG LLG+CR+HG++E
Sbjct: 678 MTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVE 737

Query: 890 YAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQID 949
            AE+ASR LF L+P NS  Y L+ N+ A + +WE V ++R  M E GV+ V   SWI ++
Sbjct: 738 LAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVN 797

Query: 950 QIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
              H+F A    HP + +IY  L +L  E++K GYVP
Sbjct: 798 NTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVP 834


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
            isoform 1 [Vitis vinifera]
          Length = 672

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/672 (34%), Positives = 354/672 (52%), Gaps = 52/672 (7%)

Query: 411  AFHEGKQIHGYVLKSALESNLSVCNCLISMYS-----RNNKLELATRVFDSMKDHNLSSW 465
            + H  KQ H  +L++    +  +   L+  Y+     R    E + RVFD ++       
Sbjct: 46   SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR------- 98

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
                                        +P++  WNC++     +      + L   M  
Sbjct: 99   ----------------------------KPNVFLWNCMIKVCIENNEPFKAILLYYEMMV 130

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
              FRPN  +   VL+A ++  ++  G + H +++++GL  D ++ +S + MY     L  
Sbjct: 131  AHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 190

Query: 586  AQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            A+ + D+     + V WN++I GY   G    A+++   M +  +   + +WN+++SG+S
Sbjct: 191  ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM---ISTWNAMISGFS 247

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G  + A      MK      + ++W+++I G +Q   + E+L+ F QMQ+E I+P   
Sbjct: 248  RCGMVEVAREFFDEMKER----DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKF 303

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
             + S+L  C  LG L  G+ IH    +N    D  + T L+DMY+K G +  A EVF K 
Sbjct: 304  VLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 363

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
            +NK ++SWN MI G A++G  ++AI LF ++      P+ ITF  +L AC + GLV++G 
Sbjct: 364  SNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGL 420

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
              F+SM  +Y + P IEHY C+VDLLG+AG L EA   + ++P +P   +WGALLG+CR 
Sbjct: 421  TIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRK 480

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            HG++E  E   + L +LEP NS  Y L+ N+ A + RWE+V  +R  M E G+K+    S
Sbjct: 481  HGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 540

Query: 945  WIQIDQ-IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
             I + +  VH F      HP   +IY  L  +   ++  GY PD   V  DIDEEEK   
Sbjct: 541  IIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETA 600

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            +  H+EKLAI +GL+ T     IR++KN RVC DCH+A K +S V  REI +RD  R+HH
Sbjct: 601  VWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHH 660

Query: 1064 FREGECSCNDCW 1075
            FR G CSC D W
Sbjct: 661  FRNGACSCKDFW 672



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 224/485 (46%), Gaps = 51/485 (10%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCR-----DVESANKLFSEVSDLEDDLLWNEIIM 369
           + HA +++ G   D ++  +L+  Y           ES+ ++F  V    +  LWN +I 
Sbjct: 52  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRK-PNVFLWNCMIK 110

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH---------- 419
           V + N +   AI L+ EM  +  +    T   +L+AC+  G   EG Q+H          
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170

Query: 420 -GYVLKSALESNLS--------------------VC-NCLISMYSRNNKLELATRVFDSM 457
            G++L SA+    S                    VC N +I  Y R  ++E A  +F+ M
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230

Query: 458 KDHNL-SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            D ++ S+WN+MIS ++  G V+VA   F++M     + D I+W+ ++ G+   G +   
Sbjct: 231 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMK----ERDEISWSAMIDGYIQEGCFMEA 286

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           L +   MQ    RP    +  VL A   L  L  GR  H Y  RN +  D  +GTSL+DM
Sbjct: 287 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 346

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
           Y K   +  A EVF+ M N+ + +WN++I G    G   +A  + ++M   +I P+ +++
Sbjct: 347 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITF 403

Query: 637 NSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
             +++  +  G  ++ L I + M K  G+ P +  +  ++    +     E+ K    + 
Sbjct: 404 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 463

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
            E   P      +LL  C   G ++ G+ +  + L+    +++   T L ++Y+K+G  +
Sbjct: 464 TE---PTPAVWGALLGACRKHGNVELGERVGKILLELE-PQNSGRYTLLSNIYAKAGRWE 519

Query: 756 SAREV 760
              EV
Sbjct: 520 EVGEV 524



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 8/242 (3%)

Query: 243 FTSAAKAFFLYF-SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIIL 301
               A+ FF     R    WS+ ++ Y   G    E LE++ ++  + +  R  +L  +L
Sbjct: 251 MVEVAREFFDEMKERDEISWSAMIDGYIQEGC-FMEALEIFHQMQKEKIRPRKFVLPSVL 309

Query: 302 KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
             C  L A   G  +H    +     D  L  +L++ Y KC  ++ A ++F ++S+ E  
Sbjct: 310 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 369

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
             WN +I     + + E+AI LF +M  +  +    T V +L ACA  G   +G  I   
Sbjct: 370 -SWNAMIGGLAMHGRAEDAIDLFSKMDINPNEI---TFVGVLNACAHGGLVQKGLTIFNS 425

Query: 422 VLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVD 479
           + K   +E  +    C++ +  R   L  A +V  S+  +   + W +++ +    G V+
Sbjct: 426 MRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVE 485

Query: 480 VA 481
           + 
Sbjct: 486 LG 487


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 267/899 (29%), Positives = 434/899 (48%), Gaps = 80/899 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            H  ++K G +   D  V + + H Y   G   +A K F      +   W+S +  Y S  
Sbjct: 869  HGFVVKTGIL--GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGY-SDS 925

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G   E+L V+  +  +GV         +   C  L    LG +V   +I+ GF+  V + 
Sbjct: 926  GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVA 985

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             +L++ +     VE A  +F  +++  D + WN +I     +     +++ F  M+    
Sbjct: 986  NSLISMFSSFSSVEEACYVFDHMNEC-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 1044

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +  S T+  +L  C+ V     G+ IHG V+K  L+SN+ +CN L+++YS   + E A  
Sbjct: 1045 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 1104

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            VF +M +                                    D+I+WN +++ +   G 
Sbjct: 1105 VFQAMTER-----------------------------------DLISWNSMMACYVQDGK 1129

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
              + L +L  +  +G   N  + +  L A +    L   +  H  I+  G    L VG +
Sbjct: 1130 CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA 1189

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF----------------KGLFVN 616
            L+ MY K   +  A++V   M   + V WN+LI G+                  KG+  N
Sbjct: 1190 LVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 1249

Query: 617  AKKMLNQMEEEEIKPDLVSW--------------------NSLVSGYSIWGQSKEALVII 656
               M++ +       DL+                      NSL++ Y+  G    +  I 
Sbjct: 1250 YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 1309

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
              + N     + +TW ++++ +  +    E+LK F +M+   +  +  + S  L     L
Sbjct: 1310 DGLGNK----SPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL 1365

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
             +L+ G+++H L +K GF  D +V    +DMY K G +    ++  +  N++  SWN +I
Sbjct: 1366 AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 1425

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
              FA +G  ++A   FHE+L+ G +PD +TF +LL+AC + GLV+EG  Y+DSM+ ++ +
Sbjct: 1426 SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 1485

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P IEH  C++DLLG++G L  A  FI+ MP  P+   W +LL +CRIHG+LE A   + 
Sbjct: 1486 FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAE 1545

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             L +L+P + + Y L  N+ A S +WEDVE LR  M    +K     SW+++   VH F 
Sbjct: 1546 HLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFG 1605

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
                 HP    I  +L  L+   K+ GYVPDT     D+DEE+K   L +H+E+LA+ +G
Sbjct: 1606 MGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFG 1665

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+ T   + +R+ KN RVC DCH+  K++S + GR+I LRD  RFHHF  G+CSC D W
Sbjct: 1666 LINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  259 bits (661), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 158/580 (27%), Positives = 279/580 (48%), Gaps = 67/580 (11%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           +K+LQ C    A  +G  IH +++ +   S+L +   LI  Y +   +  A  VFD M +
Sbjct: 34  LKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPE 93

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            +                                   +++W  ++SG+  +G ++    L
Sbjct: 94  RS-----------------------------------VVSWTAMVSGYSQNGRFEKAFVL 118

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M+  G + N  +    L+A T LR L  G +  G I +     +L+V ++L+D + K
Sbjct: 119 FSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSK 178

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS- 638
              +++A  +F  M  R++V+WN++I GY  +G   ++  M   M    + PD  +  S 
Sbjct: 179 CGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSV 238

Query: 639 -----------------------------LVSGYSIWGQSKE-ALVIIHHMKNSGIYPNV 668
                                        +V+G  I   +K  +L     ++   +  ++
Sbjct: 239 LRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDL 298

Query: 669 VTWTSLISGSLQNENYR-ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            + T+LI+G      Y  ++L  F +M Q +I  +   + S+L  C  L     G +IH 
Sbjct: 299 FSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHA 358

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
             LK     D  +   LIDMY+KSG ++ A+  F +   K + SW  +I G+A +G G  
Sbjct: 359 FALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHM 418

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
           A+ L+ ++   GF+P+ +TF +LL AC ++GL  EG + F++M   YNI P  EHYSCMV
Sbjct: 419 AVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMV 478

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
           DL  + G L+EA++ +  +  K +A++WGA+LG+  I+G++   + A+  LF ++P NS 
Sbjct: 479 DLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSV 538

Query: 908 NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
           NY ++ ++ + +  W+D  ++R  M+E   K    +S+ Q
Sbjct: 539 NYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQ 578



 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 186/710 (26%), Positives = 324/710 (45%), Gaps = 82/710 (11%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
            +LI  Y +FG+   A   F     R+ A WS+ L  Y   G   +E + ++ ++ G GV 
Sbjct: 784  TLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVG-LYEEAVGLFCQMWGLGVE 842

Query: 292  FRSRILTIILKLCTK--LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
                ++  ++  C++   MA   G +VH  ++K G   DV++  AL++FYG    V +A 
Sbjct: 843  PNGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 901

Query: 350  KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            KLF E+ D  + + W  +++    +      + +++ M+         T   +  +C  +
Sbjct: 902  KLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 960

Query: 410  GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
                 G Q+ G++++   E ++SV N LISM+S  + +E A  VFD M + ++ SWN+MI
Sbjct: 961  EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 1020

Query: 470  SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
            S+Y                                     HG  +  L     M+ L   
Sbjct: 1021 SAYA-----------------------------------HHGLCRESLRCFHWMRHLHNE 1045

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
             N +++S +L   + +  LK+GR  HG +++ GLD ++ +  +L+ +Y +    ++A+ V
Sbjct: 1046 TNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELV 1105

Query: 590  FDNMKNRNIVAWNSLIS-----GYCFKGLFVNAK-----KMLNQME-------------- 625
            F  M  R++++WNS+++     G C  GL + A+     K++N +               
Sbjct: 1106 FQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECL 1165

Query: 626  -EEEI----------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
             E +I             L+  N+LV+ Y   G   EA  ++  M      P+ VTW +L
Sbjct: 1166 IESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ----PDRVTWNAL 1221

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL-GLLQNGKEIHCLCLKNG 733
            I G  +NE   E++K +  ++++ I  N  TM S+L  C     LL++G  IH   +  G
Sbjct: 1222 IGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTG 1281

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            F  D YV   LI MY+K G+L S+  +F    NK+  +WN M+   A +G G+EA+ +F 
Sbjct: 1282 FESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFG 1341

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            E+   G   D  +F+  LAA  N  ++EEG +    +         +   +  +D+ GK 
Sbjct: 1342 EMRNVGVNLDQFSFSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKC 1400

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            G + +    +   P       W  L+ +   HG  + A      + KL P
Sbjct: 1401 GEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 1449



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 254/574 (44%), Gaps = 99/574 (17%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL+LC    A   G  +H  LI  GF  D+HL   L+ FY K  DV +A  +F  + +  
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPE-R 94

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
             + W  ++    +N ++E A  LF +M+    KA   T    L+AC  +     G Q+ 
Sbjct: 95  SVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQ 154

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G + K     NL V + L+  +S+  K+E A+ +F +M + ++ SWN+MI  Y   G+ D
Sbjct: 155 GCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD 214

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            ++ +F  M                               LRG    G  P+  ++  VL
Sbjct: 215 DSFCMFRSM-------------------------------LRG----GLVPDCYTLGSVL 239

Query: 540 QAVTELRLLKYGRESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           +A  E   L    + HG I + G   YD+  G  L++ Y KN  L++A+++   M  +++
Sbjct: 240 RASAEGGGLIIANQIHGIITQLGYGSYDIVTGL-LINAYAKNGSLRSAKDLRKGMLKKDL 298

Query: 599 VAWNSLISGYCFKGLF-VNAKKMLNQMEEEEI---------------------------- 629
            +  +LI+GY  +G++ V+A  +  +M +  I                            
Sbjct: 299 FSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHA 358

Query: 630 -----KP--DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                +P  D+   N+L+  Y+  G+ ++A      M+      NV++WTSLISG  ++ 
Sbjct: 359 FALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEK----NVISWTSLISGYAKHG 414

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK-----D 737
               ++  + +M+ +  KPN  T  SLL  C   GL   G    C C  N   K      
Sbjct: 415 YGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG----CECFNNMVNKYNIKPR 470

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN---GKEAIL-LF 792
           A   + ++D++++ G L+ A  +  K   K  AS W  ++   +IYG    GKEA   LF
Sbjct: 471 AEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLF 530

Query: 793 HELLETGFQPD-AITFTALLAACKNSGLVEEGWK 825
           +       QP+ ++ +  L +    +GL ++ WK
Sbjct: 531 N------MQPENSVNYVVLASIYSAAGLWDDAWK 558



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/550 (22%), Positives = 232/550 (42%), Gaps = 76/550 (13%)

Query: 301  LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
            LK  +++ +   G  +HA  I    +  +     L+N Y K  ++E A  +F E+    +
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH-RN 809

Query: 361  DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF-HEGKQIH 419
            +  W+ ++   +R   +E A+ LF +M     +     +  ++ AC++ G    EG Q+H
Sbjct: 810  EASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVH 869

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G+V+K+ +  ++ V   L+  Y     +  A ++F+ M DHN+ SW S++     +GY D
Sbjct: 870  GFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLM-----VGYSD 924

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                                           G+   VL + + M+  G   N ++ + V 
Sbjct: 925  ------------------------------SGNPGEVLNVYQRMRQEGVSGNQNTFATVT 954

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             +   L     G +  G+I++ G +  + V  SL+ M+     ++ A  VFD+M   +I+
Sbjct: 955  SSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDII 1014

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEE---------------EEIKPDLVSW-------- 636
            +WN++IS Y   GL   + +  + M                      D + W        
Sbjct: 1015 SWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLV 1074

Query: 637  ------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                        N+L++ YS  G+S++A ++   M       ++++W S+++  +Q+   
Sbjct: 1075 VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTER----DLISWNSMMACYVQDGKC 1130

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             + LK   ++ Q     N  T +S L  C     L   K +H L +  GF     V   L
Sbjct: 1131 LDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNAL 1190

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            + MY K G +  A++V +        +WN +I G A      EA+  +  + E G   + 
Sbjct: 1191 VTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 1250

Query: 805  ITFTALLAAC 814
            IT  ++L AC
Sbjct: 1251 ITMVSVLGAC 1260



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 129/525 (24%), Positives = 223/525 (42%), Gaps = 46/525 (8%)

Query: 206 CLSSVKSKHAQMIKMGKIWN---SD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADW 261
           C+     K   +I    I N   SD  +   LI  Y++ GD  +A   F     RS   W
Sbjct: 40  CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSW 99

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           ++ +  Y S  G  ++   ++ ++   GV          L+ CT L    +G++V   + 
Sbjct: 100 TAMVSGY-SQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQ 158

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           K  F  ++ +K AL++F+ KC  +E A+ LF  + +  D + WN +I         +++ 
Sbjct: 159 KGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMME-RDVVSWNAMIGGYAVQGFADDSF 217

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            +FR M          T+  +L+A A+ G      QIHG + +    S   V   LI+ Y
Sbjct: 218 CMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAY 277

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV-AWSLFNKMNSSRIQPDIITW 500
           ++N  L  A  +   M   +L S  ++I+ Y   G   V A  LF +MN   I  D +  
Sbjct: 278 AKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVI- 336

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                                             +  +L     L     G + H + L+
Sbjct: 337 ----------------------------------LCSMLNICANLASFALGTQIHAFALK 362

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
               YD+ +G +L+DMY K+  +++A+  FD M+ +N+++W SLISGY   G    A  +
Sbjct: 363 YQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSL 422

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSL 679
             +ME +  KP+ V++ SL+   S  G + E     ++M N   I P    ++ ++    
Sbjct: 423 YKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFA 482

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
           +     E+     ++   DIK N++   ++L      G +  GKE
Sbjct: 483 RQGLLEEAYNLLCKI---DIKHNASLWGAILGASSIYGYMSLGKE 524



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 32/293 (10%)

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++V+  L+  +E+     G+  H + +   ++  ++   +L++MY K   +++A+ VFD 
Sbjct: 745  NAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDE 804

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV-----SGY---- 643
            M++RN  +W++++SGY   GL+  A  +  QM    ++P+     SL+     SGY    
Sbjct: 805  MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE 864

Query: 644  -----------SIWGQSKEALVIIHHMKNSGIY------------PNVVTWTSLISGSLQ 680
                        I G       ++H   + G+              NVV+WTSL+ G   
Sbjct: 865  GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 924

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            + N  E L  + +M+QE +  N  T +++  +CG L     G ++    ++ GF     V
Sbjct: 925  SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 984

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            A  LI M+S   +++ A  VF       + SWN MI  +A +G  +E++  FH
Sbjct: 985  ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFH 1037



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 201/467 (43%), Gaps = 23/467 (4%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRS 257
           L      RCL  +  +    I+ G+   +  +  +L+  + + G    A+  F     R 
Sbjct: 138 LRACTSLRCLD-MGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERD 196

Query: 258 YADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
              W++ +  Y   G            L G G++     L  +L+   +     +  ++H
Sbjct: 197 VVSWNAMIGGYAVQGFADDSFCMFRSMLRG-GLVPDCYTLGSVLRASAEGGGLIIANQIH 255

Query: 318 ASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
             + + G+  +D+ +   L+N Y K   + SA  L   +  L+ DL  +  ++    +E 
Sbjct: 256 GIITQLGYGSYDI-VTGLLINAYAKNGSLRSAKDLRKGM--LKKDLFSSTALITGYAHEG 312

Query: 377 WE--NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
               +A+ LF+EM   +       +  ML  CA + +F  G QIH + LK     ++++ 
Sbjct: 313 IYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMG 372

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI MY+++ ++E A R FD M++ N+ SW S+IS Y   GY  +A SL+ KM S   +
Sbjct: 373 NALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFK 432

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           P+ +T+  LL      G           M      +P     S ++       LL+   E
Sbjct: 433 PNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLE---E 489

Query: 554 SHGYILRNGLDYDLYVGTSLM---DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           ++  + +  + ++  +  +++    +Y      + A     NM+  N V +  L S Y  
Sbjct: 490 AYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSA 549

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
            GL+ +A K+   MEE   K +        +GYS +  +K+++ ++ 
Sbjct: 550 AGLWDDAWKIRKLMEERSTKKN--------AGYSFFQATKKSIPLLQ 588



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 8/304 (2%)

Query: 205  RCLSSVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
             CL   K  HA +I  G     D ++   +L+  Y + G    A K            W+
Sbjct: 1163 ECLIESKIVHALIIVAGF---HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWN 1219

Query: 263  SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWL-GVEVHASLI 321
            + +  +     E  E ++ +  +  KG+      +  +L  C+        G+ +HA ++
Sbjct: 1220 ALIGGHAE-NEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIV 1278

Query: 322  KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
              GF+ D ++K +L+  Y KC D+ S+N +F  + + +  + WN ++     +   E A+
Sbjct: 1279 LTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGN-KSPITWNAMVAANAHHGCGEEAL 1337

Query: 382  KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            K+F EM+         +    L A A +    EG+Q+HG V+K   ES+L V N  + MY
Sbjct: 1338 KIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMY 1397

Query: 442  SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
             +  ++    ++     + +  SWN +IS++   G    A   F++M     +PD +T+ 
Sbjct: 1398 GKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 1457

Query: 502  CLLS 505
             LLS
Sbjct: 1458 SLLS 1461



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 3/159 (1%)

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           GK +H  C+        +    LI+MYSK GN++ AR VF +  ++  ASW+ M+ G+  
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG-LVEEGWKYFDSMSTDYNIIPTI 840
            G  +EA+ LF ++   G +P+     +L+ AC  SG + +EG++          I+  +
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ-VHGFVVKTGILGDV 881

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
              + +V   G  G +  A      MP   +   W +L+
Sbjct: 882 YVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 919


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 244/737 (33%), Positives = 393/737 (53%), Gaps = 61/737 (8%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D  +WN II     N  ++ AI  +  M+    ++ + T   +++AC ++ A   G+++H
Sbjct: 88   DTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVH 147

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G ++K   + ++ VCN LI MY +                               +G+++
Sbjct: 148  GKLIKIGFDLDVYVCNFLIDMYLK-------------------------------IGFIE 176

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            +A  +F++M       D+++WN ++SG+   G   + L   + M  LG + +   +   L
Sbjct: 177  LAEKVFDEMPVR----DLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISAL 232

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A +    L+ G E H  ++R+ L+ D+ V TSL+DMY K   +  A+ VF+ + ++NIV
Sbjct: 233  GACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIV 292

Query: 600  AWNSLISGY-------------------CFK-GLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
            AWN++I G                    C + G  +  K +      +   P LV   +L
Sbjct: 293  AWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETAL 352

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            V  Y   G+ K A  + + M       N+V+W ++++  +QNE Y+E+LK F  +  E +
Sbjct: 353  VDMYGKCGELKLAEHVFNQMNEK----NMVSWNTMVAAYVQNEQYKEALKMFQHILNEPL 408

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            KP++ T++S+L     L     GK+IH   +K G   + +++  ++ MY+K G+L++ARE
Sbjct: 409  KPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTARE 468

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
             F     K + SWN MIM +AI+G G+ +I  F E+   GF+P+  TF +LL AC  SGL
Sbjct: 469  FFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGL 528

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            ++EGW +F+SM  +Y I P IEHY CM+DLLG+ G LDEA  FI  MP  P A IWG+LL
Sbjct: 529  IDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLL 588

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             + R H  +  AE+A+R +  L+  N+  Y L+ N+ A + RWEDV+R+++ M E G+  
Sbjct: 589  AASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVK 648

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID-EE 998
             +  S + I+     F  +   H  T  IY  L  L+ ++ +  Y+  +   ++ +D  +
Sbjct: 649  TVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYL-HSLTKFRPLDVAK 707

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            ++G     H+ KLAI +GL+ T    P+ V KNTR+C DCH AAK +S V  REI + D 
Sbjct: 708  KRGNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDA 767

Query: 1059 ARFHHFREGECSCNDCW 1075
              FHHFR+G CSC D W
Sbjct: 768  KVFHHFRDGCCSCRDYW 784



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 203/447 (45%), Gaps = 62/447 (13%)

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G +  A  +F KMN S    D   WN ++ G+  +G +Q  +     M+  G R +  + 
Sbjct: 72  GLMGNALDMFEKMNHS----DTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
             V++A  EL  L  G++ HG +++ G D D+YV   L+DMY+K   ++ A++VFD M  
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 596 RNIVAWNSLISGY-----------CFKGLFVNAKK-----MLN----------------- 622
           R++V+WNS++SGY           CFK +     K     M++                 
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 623 --QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
             Q+   E++ D++   SL+  Y   G+   A  + + + +     N+V W ++I G   
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSK----NIVAWNAMIGG--- 300

Query: 681 NENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
                        MQ++D + P+  TM +LL +C   G L  GK IH   ++  F+    
Sbjct: 301 -------------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLV 347

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
           + T L+DMY K G LK A  VF +   K + SWN M+  +      KEA+ +F  +L   
Sbjct: 348 LETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEP 407

Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
            +PDAIT  ++L A        EG K   S      +       + +V +  K G L  A
Sbjct: 408 LKPDAITIASVLPAVAELASRSEG-KQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTA 466

Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHG 886
            +F   M  K D   W  ++ +  IHG
Sbjct: 467 REFFDGMVCK-DVVSWNTMIMAYAIHG 492



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 231/539 (42%), Gaps = 102/539 (18%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+  +  Y +  G  QE ++ +  +  +G+   +     ++K C +L+A  +G +VH  L
Sbjct: 92  WNVIIRGYTN-NGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKL 150

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           IK GFD DV++   L++ Y K   +E A K+F E+  + D + WN ++     +    ++
Sbjct: 151 IKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMP-VRDLVSWNSMVSGYQIDGDGLSS 209

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           +  F+EM     KA    ++  L AC+       G +IH  V++S LE ++ V   LI M
Sbjct: 210 LMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDM 269

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y +  K++ A RVF+ +   N+ +WN+MI                      ++ PD+IT 
Sbjct: 270 YGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQ---------------EDDKVIPDVITM 314

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
             LL                         P+ S    +L+          G+  HG+ +R
Sbjct: 315 INLL-------------------------PSCSQSGALLE----------GKSIHGFAIR 339

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
                 L + T+L+DMY K   L+ A+ VF+ M  +N+V+WN++++ Y     +  A KM
Sbjct: 340 KMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKM 399

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN------------- 667
              +  E +KPD ++  S++   +      E   I  ++   G+  N             
Sbjct: 400 FQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAK 459

Query: 668 ------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
                             VV+W ++I     +   R S++FF +M+ +  KPN +T  SL
Sbjct: 460 CGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSL 519

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG----------LIDMYSKSGNLKSAR 758
           L  C   GL+  G          GF     V  G          ++D+  ++GNL  A+
Sbjct: 520 LTACSISGLIDEGW---------GFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAK 569



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 229/499 (45%), Gaps = 59/499 (11%)

Query: 214 HAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H ++IK+G  ++ D  V + LI  YL+ G    A K F     R    W+S +  Y+  G
Sbjct: 147 HGKLIKIG--FDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDG 204

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             +  L+  + E+   G       +   L  C+       G+E+H  +I+   + D+ ++
Sbjct: 205 DGLSSLM-CFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQ 263

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L++ YGKC  V+ A ++F+ +   ++ + WN +I     ++K    +           
Sbjct: 264 TSLIDMYGKCGKVDYAERVFNRIYS-KNIVAWNAMIGGMQEDDKVIPDVI---------- 312

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                T++ +L +C++ GA  EGK IHG+ ++      L +   L+ MY +  +L+LA  
Sbjct: 313 -----TMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEH 367

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VF+ M + N+ SWN+M+++Y        A  +F  + +  ++PD IT             
Sbjct: 368 VFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAIT------------- 414

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                 ++ VL AV EL     G++ H YI++ GL  + ++  +
Sbjct: 415 ----------------------IASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNA 452

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           ++ MY K   LQ A+E FD M  +++V+WN++I  Y   G    + +  ++M  +  KP+
Sbjct: 453 IVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPN 512

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
             ++ SL++  SI G   E     + MK   GI P +  +  ++    +N N  E+  F 
Sbjct: 513 GSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFI 572

Query: 692 IQMQQEDIKPNSTTMSSLL 710
            +M    + P +    SLL
Sbjct: 573 EEMP---LVPTARIWGSLL 588



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 159/304 (52%), Gaps = 24/304 (7%)

Query: 206 CLSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           CL S    H Q+I+       D MV+ SLI  Y + G    A + F   +S++   W++ 
Sbjct: 240 CLRSGMEIHCQVIR--SELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAM 297

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIK 322
           +       G +QE  +V  +           ++T+I  L  C++  A   G  +H   I+
Sbjct: 298 I-------GGMQEDDKVIPD-----------VITMINLLPSCSQSGALLEGKSIHGFAIR 339

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
           + F   + L+ AL++ YGKC +++ A  +F+++++ ++ + WN ++   ++NE+++ A+K
Sbjct: 340 KMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNE-KNMVSWNTMVAAYVQNEQYKEALK 398

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           +F+ +     K  + TI  +L A A++ +  EGKQIH Y++K  L SN  + N ++ MY+
Sbjct: 399 MFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYA 458

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +   L+ A   FD M   ++ SWN+MI +Y   G+   +   F++M     +P+  T+  
Sbjct: 459 KCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVS 518

Query: 503 LLSG 506
           LL+ 
Sbjct: 519 LLTA 522



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 126/252 (50%), Gaps = 8/252 (3%)

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
           +P+ ++    + G+   G    AL +   M +S  +     W  +I G   N  ++E++ 
Sbjct: 55  RPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTF----IWNVIIRGYTNNGLFQEAID 110

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
           F+ +M+ E I+ ++ T   +++ CG L  L  G+++H   +K GF  D YV   LIDMY 
Sbjct: 111 FYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYL 170

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           K G ++ A +VF +   + L SWN M+ G+ I G+G  +++ F E+L  G + D     +
Sbjct: 171 KIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMIS 230

Query: 810 LLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            L AC     +  G + +   + ++  +   ++  + ++D+ GK G +D A      + +
Sbjct: 231 ALGACSIEHCLRSGMEIHCQVIRSELELDIMVQ--TSLIDMYGKCGKVDYAERVFNRI-Y 287

Query: 869 KPDATIWGALLG 880
             +   W A++G
Sbjct: 288 SKNIVAWNAMIG 299


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
            [Glycine max]
          Length = 727

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/661 (35%), Positives = 367/661 (55%), Gaps = 40/661 (6%)

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            ++  R+  S   HN      +++  + LG +  A  LF++       PD+  WN ++  +
Sbjct: 74   QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEF----CYPDVFMWNAIIRSY 129

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES--HGYILRNGLDY 565
              +  Y++ + + R M+  G  P+G +   VL+A TEL  L +G     HG I++ G   
Sbjct: 130  SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTEL--LDFGLSCIIHGQIIKYGFGS 187

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            D++V   L+ +Y K   +  A+ VFD + +R IV+W S+ISGY   G  V A +M +QM 
Sbjct: 188  DVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMR 247

Query: 626  EEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIHHMKN--------SGIYP------ 666
               +KPD ++  S++  Y+       G+S    VI   +++        +  Y       
Sbjct: 248  NNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVT 307

Query: 667  ------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
                        NV+ W ++ISG  +N +  E++  F  M   +IKP+S T+ S +    
Sbjct: 308  VAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASA 367

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             +G L+  + +     K+ +  D +V T LIDMY+K G+++ AR VF ++++K +  W+ 
Sbjct: 368  QVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSA 427

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MIMG+ ++G G EAI L+H + + G  P+ +TF  LL AC +SGLV+EGW+ F  M  D+
Sbjct: 428  MIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-DF 486

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             I+P  EHYSC+VDLLG+AGYL EA  FI  +P +P  ++WGALL +C+I+  +   E A
Sbjct: 487  EIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYA 546

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            + +LF L+P N+ +Y  + NL A S  W+ V  +R  M E G+   L +S I+I+  +  
Sbjct: 547  ANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQA 606

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP   EI+ EL  L   +K++G+VP T  V  D++ EEK + L  H+E++A+ 
Sbjct: 607  FHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVA 666

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            YGL+ T     +R+ KN R C +CH+A K +S +  REI +RD  RFHHF++G CSC D 
Sbjct: 667  YGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDY 726

Query: 1075 W 1075
            W
Sbjct: 727  W 727



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 200/432 (46%), Gaps = 44/432 (10%)

Query: 282 WGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
           W  +H  G  F       +LK CT+L+ F L   +H  +IK GF  DV ++  L+  Y K
Sbjct: 147 WTGVHPDGFTF-----PYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAK 201

Query: 342 CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
           C  +  A  +F  +      + W  II    +N K   A+++F +M+ +  K     +V 
Sbjct: 202 CGHIGVAKVVFDGLYH-RTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVS 260

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L+A   V    +G+ IHG+V+K  LE   ++   L + Y++   + +A   FD MK  N
Sbjct: 261 ILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTN 320

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           +  WN+MIS Y   G+ + A +LF+ M S  I+PD +T                      
Sbjct: 321 VIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVT---------------------- 358

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
                        V   + A  ++  L+  +    Y+ ++    D++V TSL+DMY K  
Sbjct: 359 -------------VRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCG 405

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            ++ A+ VFD   ++++V W+++I GY   G    A  + + M++  + P+ V++  L++
Sbjct: 406 SVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLT 465

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             +  G  KE   + H MK+  I P    ++ ++    +     E+  F +++    I+P
Sbjct: 466 ACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIP---IEP 522

Query: 702 NSTTMSSLLQTC 713
             +   +LL  C
Sbjct: 523 GVSVWGALLSAC 534


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 260/816 (31%), Positives = 410/816 (50%), Gaps = 76/816 (9%)

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            L  ++K C  +    LG  VH   +K     DV +  AL+  YGK   VESA K+F ++ 
Sbjct: 199  LPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP 258

Query: 357  DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS--RTIVKMLQACAKVGAFHE 414
               + + WN ++   L N  +E +  LF+ +       +    T+V ++  CA+ G    
Sbjct: 259  Q-RNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRL 317

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            G   HG  LK  L   L V + L+ MYS+   L  A  +FD+                  
Sbjct: 318  GMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN----------------- 360

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGS 533
                               + ++I+WN ++ G+     ++    LLR MQ     + N  
Sbjct: 361  -------------------EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEV 401

Query: 534  SVSVVLQAVTE-LRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
            ++  VL    E ++ LK  +E HGY LR+G +  D  V  + +  Y K   L  A+ VF 
Sbjct: 402  TLLNVLPVCEEEIQFLKL-KEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFC 460

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--------- 642
             M+++ + +WN+LI G+   G    A  +   M    ++PDL +  SL+S          
Sbjct: 461  GMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSC 520

Query: 643  -----------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                                    S++ Q  + L+      N     N+V W ++I+G  
Sbjct: 521  GKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNME-EKNLVCWNTMINGFS 579

Query: 680  QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
            QNE   ++L  F QM    I P+  ++   L  C  +  L+ GKE+HC  +K+   + ++
Sbjct: 580  QNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSF 639

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            V   LIDMY+K G ++ ++ +F +   K   +WN +I G+ I+G+G++AI LF  +   G
Sbjct: 640  VTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAG 699

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
            F+PD++TF ALL AC ++GLV EG +Y   M + + I P +EHY+C+VD+LG+AG L+EA
Sbjct: 700  FRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEA 759

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
             + +  +P KPD+ IW +LL SCR +  L+  E  + +L +L P  + NY L+ N  A  
Sbjct: 760  LELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARL 819

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
             +W++V ++R  M E+G++     SWI+I   V  F         + +I      L  ++
Sbjct: 820  GKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKI 879

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
             K+GY PDT CV  +++E+EK K+L +H+EKLAI +GL+ T     +RV KN R+C DCH
Sbjct: 880  NKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCH 939

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             A K +S +  REI +RD  RFHHF+ G CSC D W
Sbjct: 940  NAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 174/634 (27%), Positives = 288/634 (45%), Gaps = 84/634 (13%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASL-IKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           +++ ++L+LC +     +G ++H  +     F  DV L   L+  Y  C D    + L  
Sbjct: 94  QLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSIC-DSPYDSCLVF 152

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAF 412
             S  ++  LWN ++   LRN  + +A+ +F EM   +     + T+  +++AC  V   
Sbjct: 153 NASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDV 212

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G+ +HG+ LK+ + S++ V N LI+MY +   +E A +VFD M   NL SWNS     
Sbjct: 213 RLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNS----- 267

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                                    + + CL +G F   SY     LL G +  G  P+ 
Sbjct: 268 -------------------------VMYACLENGVFEE-SYGLFKGLLNGDE--GLMPDV 299

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
           +++  V+        ++ G   HG  L+ GL  +L V +SL+DMY K   L  A+ +FD 
Sbjct: 300 ATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT 359

Query: 593 MKNRNIVAWNSLISGYC----FKGLFVNAKKMLNQME-----------------EEE--- 628
              +N+++WNS+I GY     F+G F   +KM  QME                 EEE   
Sbjct: 360 -NEKNVISWNSMIGGYSKDRDFRGAFELLRKM--QMEDKVKVNEVTLLNVLPVCEEEIQF 416

Query: 629 ---------------IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                          I+ D +  N+ V+GY+  G    A  +   M++      V +W +
Sbjct: 417 LKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESK----MVSSWNA 472

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           LI G +QN   R++L  ++ M+   ++P+  T++SLL  C  L  L  GKEIH   L+NG
Sbjct: 473 LIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNG 532

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
           F  D ++   L+ +Y + G +  A+  F     K L  WN MI GF+      +A+ +FH
Sbjct: 533 FELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFH 592

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
           ++L +   PD I+    L AC     +  G K     +   ++         ++D+  K 
Sbjct: 593 QMLSSKIWPDEISIIGALGACSQVSALRLG-KELHCFAVKSHLTEHSFVTCSLIDMYAKC 651

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           G ++++ +    +  K + T W  L+    IHGH
Sbjct: 652 GCMEQSQNIFDRVHLKGEVT-WNVLITGYGIHGH 684



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 164/675 (24%), Positives = 294/675 (43%), Gaps = 122/675 (18%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG---- 287
           +LI  Y +FG   SA K F     R+   W+S +  Y      V E  E +G   G    
Sbjct: 236 ALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVM--YACLENGVFE--ESYGLFKGLLNG 291

Query: 288 -KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
            +G++     +  ++ LC +     LG+  H   +K G   ++ +  +L++ Y KC  + 
Sbjct: 292 DEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLC 351

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQA 405
            A  LF   ++ ++ + WN +I    ++  +  A +L R+MQ      ++  T++ +L  
Sbjct: 352 EARVLFD--TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPV 409

Query: 406 CAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           C +   F + K+IHGY L+   ++S+  V N  ++ Y++   L  A  VF  M+   +SS
Sbjct: 410 CEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSS 469

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           WN++I  +   G+   A  L+  M  S ++PD+ T                         
Sbjct: 470 WNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFT------------------------- 504

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
                     ++ +L A   L+ L  G+E HG +LRNG + D ++  SL+ +YV+   + 
Sbjct: 505 ----------IASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKIL 554

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------NS 638
            A+  FDNM+ +N+V WN++I+G+       +A  M +QM   +I PD +S        S
Sbjct: 555 LAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACS 614

Query: 639 LVSGYSIWGQSKEALVIIHHM---------------------KNSGIYPNV-----VTWT 672
            VS   + G+      +  H+                     ++  I+  V     VTW 
Sbjct: 615 QVSALRL-GKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWN 673

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            LI+G   + + R++++ F  MQ    +P+S T  +LL  C   GL+  G E        
Sbjct: 674 VLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLE-------- 725

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
                 Y+           G ++S   +  K     L  + C++      G   EA+ L 
Sbjct: 726 ------YL-----------GQMQSLFGIKPK-----LEHYACVVDMLGRAGRLNEALELV 763

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP-TIEHYSCMVDLLG 851
           +EL +   +PD+  +++LL++C+N   ++ G K  + +     + P   E+Y  + +   
Sbjct: 764 NELPD---KPDSRIWSSLLSSCRNYRDLDIGEKVANKL---LELGPDKAENYVLISNFYA 817

Query: 852 KAGYLDEAWDFIRTM 866
           + G     WD +R M
Sbjct: 818 RLG----KWDEVRKM 828



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 214/468 (45%), Gaps = 85/468 (18%)

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLE 448
           SS     + I  +LQ C +      G++IH ++  S   ++++ +   L++MYS  +   
Sbjct: 87  SSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPY 146

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            +  VF++ +  NL  WN+                                   LLSG+ 
Sbjct: 147 DSCLVFNASRRKNLFLWNA-----------------------------------LLSGYL 171

Query: 509 THGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
            +  +++ + +   M SL  F P+  ++  V++A   +  ++ G   HG+ L+  +  D+
Sbjct: 172 RNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDV 231

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA----KKMLNQ 623
           +VG +L+ MY K   +++A +VFD M  RN+V+WNS++      G+F  +    K +LN 
Sbjct: 232 FVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNG 291

Query: 624 MEEEEIKPDLVSW-----------------------------------NSLVSGYSIWGQ 648
             +E + PD+ +                                    +SL+  YS  G 
Sbjct: 292 --DEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGY 349

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMS 707
             EA V+    +      NV++W S+I G  ++ ++R + +   +MQ ED +K N  T+ 
Sbjct: 350 LCEARVLFDTNEK-----NVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLL 404

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           ++L  C         KEIH   L++GFI+ D  VA   +  Y+K G+L  A  VF    +
Sbjct: 405 NVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMES 464

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           K ++SWN +I G    G  ++A+ L+  +  +G +PD  T  +LL+AC
Sbjct: 465 KMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSAC 512



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 158/327 (48%), Gaps = 13/327 (3%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           +K  H   ++ G I + + +  + +  Y + G    A   F    S+  + W++ +    
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALI---- 474

Query: 270 SFGGEVQ-----ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
             GG VQ     + L+++  + G G+      +  +L  C +L +   G E+H S+++ G
Sbjct: 475 --GGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNG 532

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F+ D  +  +L++ Y +C  +  A KLF +  + ++ + WN +I    +NE   +A+ +F
Sbjct: 533 FELDEFICISLVSLYVQCGKILLA-KLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMF 591

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            +M  S       +I+  L AC++V A   GK++H + +KS L  +  V   LI MY++ 
Sbjct: 592 HQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKC 651

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +E +  +FD +      +WN +I+ Y   G+   A  LF  M ++  +PD +T+  LL
Sbjct: 652 GCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALL 711

Query: 505 SGHFTHGSYQNVLTLLRGMQSL-GFRP 530
           +     G     L  L  MQSL G +P
Sbjct: 712 TACNHAGLVAEGLEYLGQMQSLFGIKP 738


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/660 (34%), Positives = 349/660 (52%), Gaps = 45/660 (6%)

Query: 418  IHGYVLKSALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H   L++ L S    V N LI MY R      A R FD +   +  +W  +IS    +G
Sbjct: 128  LHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMG 187

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             +     L ++        D+I+W  L++ +      +  +   + M S G  P+  +V 
Sbjct: 188  MLCDTQLLLSQAPVR----DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVI 243

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             VL A  +L+ L+ GR  H  +   G+     +  +L+DMY K     +AQ+VFD +   
Sbjct: 244  AVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGR- 302

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
                                              P   SWN+++ GY   G    A  + 
Sbjct: 303  ---------------------------------GPRPQSWNAIIDGYCKHGHVDVARSLF 329

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
              M+      +++T+ S+++G + +   RE+L  F+ M++ D++ ++ T+ +LL  C  L
Sbjct: 330  DEMEVR----DIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASL 385

Query: 717  GLLQNGKEIHCLCLKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            G LQ G+ +H  C++   ++ D Y+ T L+DMY K G +  A  VF++   + + +W  M
Sbjct: 386  GALQQGRALHA-CIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAM 444

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I G A  G GK A+  F+++   GFQP+++++ A+L AC +S L+ EG  YFD M   YN
Sbjct: 445  IAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYN 504

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P IEHY CM+DLLG++G LDEA D ++TMP +P+A IW ++L +CR+H H++ A+ A+
Sbjct: 505  IHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAA 564

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
              L KLEP     Y  + N+   S +WE+  ++R  M+E  VK    +S I +   VH F
Sbjct: 565  EHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKF 624

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                  HP   EI   L  +   +K LGY P T  +  D+DEEEK + LL+H+EKLAI +
Sbjct: 625  VVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAF 684

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+      P+ + KN RVC DCH+A K +S +  REI +RD +RFHHFREG CSCND W
Sbjct: 685  GLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 196/403 (48%), Gaps = 16/403 (3%)

Query: 318 ASLIKRGFDFDVHLKCA-----LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           A+  +R FD ++H+K A     L++   K   +     L S+ + + D + W  +I    
Sbjct: 158 AADARRAFD-EIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQ-APVRDVISWTSLIAAYS 215

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           R  +   A+  F+ M          T++ +L ACAK+     G+ +H  V +  + ++ +
Sbjct: 216 RANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSEN 275

Query: 433 VCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           +   LI MY++      A +VFD++ +     SWN++I  Y   G+VDVA SLF++M   
Sbjct: 276 LVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVR 335

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               DIIT+N +++G+   G  +  L L   M+    R +  +V  +L A   L  L+ G
Sbjct: 336 ----DIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQG 391

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           R  H  I +  ++ D+Y+GT+L+DMY+K   +  A  VF  M  R++  W ++I+G  F 
Sbjct: 392 RALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFN 451

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVT 670
           G+   A +   QM  +  +P+ VS+ ++++  S      E  +    M+    I+P +  
Sbjct: 452 GMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEH 511

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +  +I    ++    E++     M    I+PN+   +S+L  C
Sbjct: 512 YGCMIDLLGRSGLLDEAMDLVKTMP---IQPNAVIWASILSAC 551



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 161/389 (41%), Gaps = 77/389 (19%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R    W+S +  Y S     +E +  +  +   G+      +  +L  C KL    LG  
Sbjct: 202 RDVISWTSLIAAY-SRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRS 260

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRD------------------------------- 344
           +H  + ++G     +L  AL++ Y KC D                               
Sbjct: 261 LHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHG 320

Query: 345 -VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            V+ A  LF E+ ++ D + +N ++   + + +   A+ LF  M+    +  + T+V +L
Sbjct: 321 HVDVARSLFDEM-EVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLL 379

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            ACA +GA  +G+ +H  + +  +E+++ +   L+ MY +  +++ AT VF  M   ++ 
Sbjct: 380 TACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVH 439

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +W +MI+   GL         FN M  + ++            HF    YQ        M
Sbjct: 440 TWTAMIA---GLA--------FNGMGKAALE------------HF----YQ--------M 464

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS----LMDMYVK 579
           +  GF+PN  S   VL A +   LL  GR    Y     + Y+++        ++D+  +
Sbjct: 465 RCDGFQPNSVSYIAVLTACSHSCLLNEGRL---YFDEMRILYNIHPQIEHYGCMIDLLGR 521

Query: 580 NDCLQNAQEVFDNMK-NRNIVAWNSLISG 607
           +  L  A ++   M    N V W S++S 
Sbjct: 522 SGLLDEAMDLVKTMPIQPNAVIWASILSA 550


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/672 (35%), Positives = 360/672 (53%), Gaps = 79/672 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F  +     +P+ + WN ++ GH       + LTL   M SLG  PN
Sbjct: 11   FDGLPY---ATSVFETIQ----EPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPN 63

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L++  + +    G++ HG +L+ G D DLYV TSL+ MYV+N  L++A +VFD
Sbjct: 64   SYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFD 123

Query: 592  NMKNRNIVA-------------------------------WNSLISGYCFKGLFVNAKKM 620
               +R++V+                               WN++ISGY   G +  A ++
Sbjct: 124  RSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALEL 183

Query: 621  LNQMEEEEIKPD----------------------LVSW-------------NSLVSGYSI 645
              +M +  ++PD                      + SW             N+L+  YS 
Sbjct: 184  FEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSK 243

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   +     Y +V++W +LI G      Y+E+L  F +M +    PN  T
Sbjct: 244  CGEVETACGLFQGLS----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 299

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            M S+L  C  LG +  G+ IH    K   G    + + T LIDMY+K G++++A +VF  
Sbjct: 300  MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 359

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +K+L+SWN MI GFA++G    +  LF  + + G +PD ITF  LL+AC +SG+++ G
Sbjct: 360  MLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLG 419

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F SM+ DY + P +EHY CM+DLLG +G   EA + I TM  +PD  IW +LL +C+
Sbjct: 420  RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 479

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG++E AE  ++ L K+EP N ++Y L+ N+ A + RWEDV R+R  ++   +K V   
Sbjct: 480  MHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGC 539

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I++D +V  F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K   
Sbjct: 540  SSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 599

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RFHH
Sbjct: 600  LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHH 659

Query: 1064 FREGECSCNDCW 1075
            FR+G CSCND W
Sbjct: 660  FRDGVCSCNDYW 671



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 226/512 (44%), Gaps = 81/512 (15%)

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  +F  + +  + L+WN +I     +    +++ L+  M        S T   +L++CA
Sbjct: 17  ATSVFETIQE-PNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCA 75

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
           K   F EG+QIHG VLK   + +L V   LISMY +N +LE A +VFD     ++ S+ +
Sbjct: 76  KSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTA 135

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +I+ Y   G +  A  LF+++       D+++WN ++SG+   G Y+  L L   M  + 
Sbjct: 136 LITGYASRGDIRSAQKLFDEIPVK----DVVSWNAMISGYAETGCYKEALELFEEMMKMN 191

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            RP+ S+   VL A      ++ GR+ H ++  +G D +L +  +L+D+Y K   ++ A 
Sbjct: 192 VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETAC 251

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP---------------- 631
            +F  +  +++++WN+LI GY    L+  A  +  +M      P                
Sbjct: 252 GLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLG 311

Query: 632 --DLVSW-------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
             D+  W                    SL+  Y+  G  + A    H + NS ++ ++ +
Sbjct: 312 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA----HQVFNSMLHKSLSS 367

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           W ++I G   +     S   F +M++  I+P+  T   LL  C   G+L  G+ I     
Sbjct: 368 WNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI----- 422

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
                                   +S  + ++ +    L  + CMI      G  KEA  
Sbjct: 423 -----------------------FRSMTQDYKMTPK--LEHYGCMIDLLGHSGLFKEA-- 455

Query: 791 LFHELLET-GFQPDAITFTALLAACKNSGLVE 821
              E++ T   +PD + + +LL ACK  G VE
Sbjct: 456 --EEMINTMEMEPDGVIWCSLLKACKMHGNVE 485



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 202/459 (44%), Gaps = 73/459 (15%)

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF---------- 338
           G++  S     +LK C K   F  G ++H  ++K GFD D+++  +L++           
Sbjct: 59  GLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDA 118

Query: 339 ---------------------YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
                                Y    D+ SA KLF E+  ++D + WN +I        +
Sbjct: 119 YKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIP-VKDVVSWNAMISGYAETGCY 177

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           + A++LF EM   + +    T V +L ACA  G+   G+Q+H +V     +SNL + N L
Sbjct: 178 KEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNAL 237

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           I +YS+  ++E A  +F  +   ++ SWN++I  YT +     A  LF +M  S      
Sbjct: 238 IDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS------ 291

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                                        G  PN  ++  VL A   L  +  GR  H Y
Sbjct: 292 -----------------------------GETPNDVTMLSVLPACAHLGAIDIGRWIHVY 322

Query: 558 ILR--NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
           I +   G+     + TSL+DMY K   ++ A +VF++M ++++ +WN++I G+   G   
Sbjct: 323 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRAD 382

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSL 674
            +  + ++M +  I+PD +++  L+S  S  G       I   M ++  + P +  +  +
Sbjct: 383 ASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCM 442

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           I     +  ++E+ +    M+ E   P+     SLL+ C
Sbjct: 443 IDLLGHSGLFKEAEEMINTMEME---PDGVIWCSLLKAC 478



 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 142/277 (51%), Gaps = 4/277 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y   GD  SA K F     +    W++ +  Y   G   +E LE++ E+    V 
Sbjct: 135 ALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGC-YKEALELFEEMMKMNVR 193

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L  C    +  LG +VH+ +   GFD ++ +  AL++ Y KC +VE+A  L
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +S  +D + WN +I        ++ A+ LF+EM  S       T++ +L ACA +GA
Sbjct: 254 FQGLS-YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312

Query: 412 FHEGKQIHGYVLK--SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
              G+ IH Y+ K    + +  S+   LI MY++   +E A +VF+SM   +LSSWN+MI
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 372

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             +   G  D ++ LF++M    I+PD IT+  LLS 
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSA 409


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 243/724 (33%), Positives = 381/724 (52%), Gaps = 67/724 (9%)

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           +  L  ++K C  L A  LG  VH +    G   DV++  AL+  Y     + +A   F 
Sbjct: 141 AHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFD 200

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
            + +  D +LWN ++   ++    + A++LFR M+ S  +    T+   L  CA      
Sbjct: 201 GIPE-RDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLL 259

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G Q+H   +K  LE  ++V N L++MY++   L                          
Sbjct: 260 SGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCL-------------------------- 293

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                D AW LF  M     Q D++TWN ++SG   +G +     L   MQ  G RP+  
Sbjct: 294 -----DDAWRLFELMP----QDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSI 344

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           ++  +L A+T+L  LK G+E HGYI+RN ++ D+++ ++L+D+Y K   ++ AQ ++D  
Sbjct: 345 TLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAA 404

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----IWGQ 648
           +  ++V  +++ISGY   G+   A +M   + E+ IKP+ V+  S++ G +       GQ
Sbjct: 405 RAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQ 464

Query: 649 SKEALVI--------------------------IHHMKNSGIYPNVVTWTSLISGSLQNE 682
                V+                           H++       + VTW S+IS   QN 
Sbjct: 465 QIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNG 524

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
             +E+L  F QM  E IK N+ T+S+ L  C  L  +  GKEIH + +K     D +  +
Sbjct: 525 KPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAES 584

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            LIDMY+K GNL+ A  VF    +K   SWN +I  +  +G  KE++ L H + E G++P
Sbjct: 585 ALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKP 644

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D +TF AL++AC ++GLVEEG + F  M+  Y I P +EH++CMVDL  ++G LD+A  F
Sbjct: 645 DHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQF 704

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
           I  MPFKPDA IWGALL +CR+H ++E A+IAS+ LFKL+P NS  Y LM N+ A++ RW
Sbjct: 705 IADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRW 764

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
           + V ++R  M +  +  +  +SW+ ++   H+F A    HP + +IY  L  L+ E+++ 
Sbjct: 765 DGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREE 824

Query: 983 GYVP 986
           GYVP
Sbjct: 825 GYVP 828



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 162/628 (25%), Positives = 279/628 (44%), Gaps = 75/628 (11%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFD---VHLKCALMNFYGKCRDVESANKLFS 353
           L  +L+ C       LG+++HA  +  G   D   + L   L+  Y   R    A  +FS
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 354 EV--SDLEDDLLWNEIIMVKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKV 409
            +  +     L WN +I       +   A+  + +M    ++    + T+  ++++CA +
Sbjct: 95  ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           GA   G+ +H       L +++ V + L+ MY+    L  A   FD + + +   WN M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
                 G VD A  LF  M +S  +P+  T  C LS                        
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLS------------------------ 250

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                        T+  LL  G + H   ++ GL+ ++ V  +L+ MY K  CL +A  +
Sbjct: 251 ----------VCATDADLLS-GAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRL 299

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG-- 647
           F+ M   ++V WN +ISG    GLFV A  +   M+    +PD ++  SL+   +     
Sbjct: 300 FELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGL 359

Query: 648 -QSKE------------------ALVIIH----------HMKNSGIYPNVVTWTSLISGS 678
            Q KE                  ALV I+          ++ ++    +VV  +++ISG 
Sbjct: 360 KQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGY 419

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
           + N    E+L+ F  + ++ IKPN+ T++S+L  C  +  L  G++IH   L+N + +  
Sbjct: 420 VLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKC 479

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
           YV + L+DMY+K G L  +  +F K + K   +WN MI  F+  G  +EA+ LF ++   
Sbjct: 480 YVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCME 539

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
           G + + IT +A L+AC +   +  G K    ++    I   I   S ++D+  K G L+ 
Sbjct: 540 GIKYNNITISAALSACASLPAIYYG-KEIHGVTIKGPIKADIFAESALIDMYAKCGNLEL 598

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHG 886
           A      MP K + + W +++ +   HG
Sbjct: 599 ALRVFEFMPDKNEVS-WNSIISAYGAHG 625



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 139/603 (23%), Positives = 258/603 (42%), Gaps = 78/603 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + G   +A  AF     R    W+  ++      G+V   + ++  +   G  
Sbjct: 181 ALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIK-AGDVDGAVRLFRNMRASGCE 239

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L   L +C        G ++H+  +K G + +V +   L+  Y KC+ ++ A +L
Sbjct: 240 PNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRL 299

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+   +D + WN +I   ++N  +  A  LF +MQ S A+  S T+V +L A   +  
Sbjct: 300 F-ELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNG 358

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
             +GK++HGY++++ +  ++ + + L+ +Y +   + +A  ++D+ +  ++   ++MIS 
Sbjct: 359 LKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISG 418

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y   G  + A  +F  +    I+P+ +T                                
Sbjct: 419 YVLNGMSEEALQMFRYLLEQCIKPNAVT-------------------------------- 446

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              ++ VL     +  L  G++ HGY+LRN  +   YV ++LMDMY K   L  +  +F 
Sbjct: 447 ---IASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFL 503

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------------------------ 627
            M  ++ V WNS+IS +   G    A  +  QM  E                        
Sbjct: 504 KMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYY 563

Query: 628 -----------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                       IK D+ + ++L+  Y+  G  + AL +   M +     N V+W S+IS
Sbjct: 564 GKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDK----NEVSWNSIIS 619

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFI 735
               +   +ES+     MQ+E  KP+  T  +L+  C   GL++ G ++  C+  K    
Sbjct: 620 AYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIA 679

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHE 794
                   ++D+YS+SG L  A +       K  A  W  ++    ++ N + A +   E
Sbjct: 680 PRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQE 739

Query: 795 LLE 797
           L +
Sbjct: 740 LFK 742



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/557 (23%), Positives = 229/557 (41%), Gaps = 87/557 (15%)

Query: 382 KLFREMQFSSAKAISRT-----IVKMLQACAKVGAFHEGKQIHGYVLKSALESN---LSV 433
           + F    FS+  A++       ++ +L+ C        G QIH   + S   S+   L++
Sbjct: 13  RPFCSTTFSATAAVTDVSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLAL 72

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSS---WNSMISSYTGLGYVDVAWSLFNKMNS 490
              L+ MY    +   A  VF ++     +S   WN +I  +T  G   +A   + KM S
Sbjct: 73  HTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWS 132

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
               P                                  P+  ++  V+++   L  +  
Sbjct: 133 HPAAPS---------------------------------PDAHTLPYVVKSCAALGAMSL 159

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           GR  H      GL  D+YVG++L+ MY     L NA++ FD +  R+ V WN ++ G   
Sbjct: 160 GRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIK 219

Query: 611 KGLFVNAKKMLNQMEEEEIKP----------------DLVSW------------------ 636
            G    A ++   M     +P                DL+S                   
Sbjct: 220 AGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAV 279

Query: 637 -NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            N+L++ Y+      +A  +   M       ++VTW  +ISG +QN  + E+   F  MQ
Sbjct: 280 ANTLLAMYAKCQCLDDAWRLFELMPQD----DLVTWNGMISGCVQNGLFVEAFGLFYDMQ 335

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           +   +P+S T+ SLL     L  L+ GKE+H   ++N    D ++ + L+D+Y K  +++
Sbjct: 336 RSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVR 395

Query: 756 SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            A+ ++  +    +   + MI G+ + G  +EA+ +F  LLE   +P+A+T  ++L  C 
Sbjct: 396 MAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCA 455

Query: 816 NSGLVEEGWKYFD-SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
           +   +  G +     +   Y     +E  S ++D+  K G LD +      M  K D   
Sbjct: 456 SMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRLDLSHYIFLKMSQK-DEVT 512

Query: 875 WGALLGSCRIHGHLEYA 891
           W +++ S   +G  + A
Sbjct: 513 WNSMISSFSQNGKPQEA 529


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/672 (34%), Positives = 357/672 (53%), Gaps = 48/672 (7%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS--SYTGLGYVDVAWSLFNKMNSSR 492
            N L++ Y RN   + A  +F  M   +L+S+N++IS  S       D A +L     S  
Sbjct: 52   NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAAL----ASIP 107

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
              P ++++  LL G+  HG   + + L + M       N  S +V+L       LL  GR
Sbjct: 108  FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGG-----LLDAGR 158

Query: 553  ESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
             +    L + + D D+   T+++  Y +   +  A+ +FD M  RN+V+W ++ISGY   
Sbjct: 159  VNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN 218

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP----- 666
            G    A+K+   M E     + VSW +++ GY   G  ++A  + + M    +       
Sbjct: 219  GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMM 274

Query: 667  ----------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                  +  TW+++I    QNE   E+L  F +M    ++PN  
Sbjct: 275  VGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP 334

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            ++ S+L  C  L +L  G+E+H   L+  F  D +  + LI MY K GNL  A+ VF   
Sbjct: 335  SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K +  WN MI G+A +G G++A+ +FH++   G  PD IT+   L AC  +G V+EG 
Sbjct: 395  EPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGR 454

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            + F+SM+ + +I P  EHYSCMVDLLG++G ++EA+D I+ MP +PDA IWGAL+G+CR+
Sbjct: 455  EIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRM 514

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H + E AE A+++L +LEP N+  Y L+ ++     RWED  ++R  +    +      S
Sbjct: 515  HRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCS 574

Query: 945  WIQIDQIVHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            WI+ D+ VH+F S +   HP    I   L  L   + + GY  D   V  DIDEE+K   
Sbjct: 575  WIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHS 634

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+E+ A+ YGL+K     PIRV+KN RVC DCH+A K ++ +  REI LRD  RFHH
Sbjct: 635  LRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHH 694

Query: 1064 FREGECSCNDCW 1075
            F++G CSC D W
Sbjct: 695  FKDGFCSCRDYW 706



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEV---QELLEVWGELHGK 288
           +++  Y + G  T A   F     R+   W++ +  Y    GEV   ++L EV  E   +
Sbjct: 179 AMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQ-NGEVNLARKLFEVMPE---R 234

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
             +  + +L   ++           VE  A L     +  V    A+M  +G+   V++A
Sbjct: 235 NEVSWTAMLVGYIQAGH--------VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAA 286

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F ++ +  DD  W+ +I    +NE    A+  FREM +   +    +++ +L  CA 
Sbjct: 287 KTVFEKMCE-RDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +     G+++H  +L+ + + ++   + LI+MY +   L+ A RVF + +  ++  WNSM
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           I+ Y   G  + A  +F+ M  + + PD IT+
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437



 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 28/299 (9%)

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           ++ A+  F+ M  R   ++N+L++GY    L   A  +  +M       DL S+N+L+SG
Sbjct: 33  IEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR----DLASYNALISG 88

Query: 643 YSIWGQS-KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S+  Q+  +A   +  +      P+VV++TSL+ G +++    ++++ F QM +     
Sbjct: 89  LSLRRQTLPDAAAALASIP---FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER---- 141

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI-KDAYVATGLIDMYSKSGNLKSAREV 760
           N  + + LL      GLL  G+      L +    +D    T ++  Y ++G +  AR +
Sbjct: 142 NHVSYTVLLG-----GLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
           F +   + + SW  MI G+A  G     + L  +L E   + + +++TA+L     +G V
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGE----VNLARKLFEVMPERNEVSWTAMLVGYIQAGHV 252

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           E+  + F++M       P     + MV   G+ G +D A      M  + D T W A++
Sbjct: 253 EDAAELFNAMPEH----PVAACNAMMVG-FGQRGMVDAAKTVFEKMCERDDGT-WSAMI 305



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 6/229 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  + + G   +A   F     R    WS+ ++ YE     + E L  + E+  +GV 
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQ-NEFLMEALSTFREMLWRGVR 330

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  IL +C  L     G EVHA++++  FD DV    AL+  Y KC +++ A ++
Sbjct: 331 PNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRV 390

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F    + +D ++WN +I    ++   E A+ +F +M+ +       T +  L AC+  G 
Sbjct: 391 F-HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGK 449

Query: 412 FHEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
             EG++I +   + S++       +C++ +  R+  +E A   FD +K+
Sbjct: 450 VKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEA---FDLIKN 495


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/751 (31%), Positives = 383/751 (50%), Gaps = 74/751 (9%)

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS-VCNCLISMYSRNNKLELA 450
            ++ +S     +L A A+    H    +H  +L++      + + N L++ Y +  +   A
Sbjct: 2    SRPLSSQYAALLSAAARTEP-HAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARA 60

Query: 451  TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             RVFD+    NL ++N+++S+      +D   SLF  M     Q D +++N +++G    
Sbjct: 61   RRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASM----AQRDTVSYNAVIAGFSGG 116

Query: 511  GSYQNVL----TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            G++   +    TLLR   S+  RP+  ++S ++ A + L     GR+ H  ILR G   +
Sbjct: 117  GAHARAVRLYHTLLRAGSSV--RPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVN 174

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV--------------------------- 599
             +VG+ L+ MY K   + +A+ VFD M  +N+V                           
Sbjct: 175  AFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTD 234

Query: 600  ----AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSK 650
                 W ++++G+   GL   A     +M  + I  D  ++ S+++          G+  
Sbjct: 235  RDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQI 294

Query: 651  EALVIIHHMKNS---------------GIYP-----------NVVTWTSLISGSLQNENY 684
             A +I  H  ++                I P           N+++WT+LI G  QN   
Sbjct: 295  HAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCS 354

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+++ F +MQ++ I P+  T+ S++ +C  L  L+ G + HCL L +G +    V+  L
Sbjct: 355  EEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNAL 414

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            + +Y K G+++ A  +F +       SW  ++ G+A +G  KE I LF ++L    +PD 
Sbjct: 415  VTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDG 474

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF  +L+AC  +G VE+G  YF SM  D+ I+P  +HY+CM+DL  ++G L EA +FI+
Sbjct: 475  VTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIK 534

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP  PDA  WG LL +CR+ G +E  + A+  L +++P N A+Y L+ ++ A    W  
Sbjct: 535  QMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQ 594

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V +LR  M +  VK     SWI+    VH+FSA+   HP +  IY +L  L S+M + GY
Sbjct: 595  VAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGY 654

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             PD   V  D+ + +K  ++  H+EKLAI +GLM      PIR++KN RVC DCH A K 
Sbjct: 655  KPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKL 714

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S + GR+I +RD  RFH F  G CSC D W
Sbjct: 715  ISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  180 bits (457), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 238/542 (43%), Gaps = 81/542 (14%)

Query: 322 KRGFDFDVHLKC----ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
           +R FD   H       AL++     R ++  + LF+ ++   D + +N +I         
Sbjct: 61  RRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQ-RDTVSYNAVIAGFSGGGAH 119

Query: 378 ENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             A++L+  +    SS +    T+  M+ A + +G    G+Q H  +L+     N  V +
Sbjct: 120 ARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGS 179

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+ MY++   +  A RVFD M   N+  +N+MI+       V+ A  LF  M       
Sbjct: 180 PLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDR---- 235

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D ITW  +++G   +G     L   R M+  G   +  +   +L A   L  L+ G++ H
Sbjct: 236 DCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIH 295

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            YI+R   D +++VG++L+DMY K   ++ A+  F  M  +NI++W +LI GY   G   
Sbjct: 296 AYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSE 355

Query: 616 NAKKMLNQMEEEEIKPDLVSWNS---------------------LVSGYSIWGQSKEALV 654
            A ++ ++M+ + I PD  +  S                     LVSG   +     ALV
Sbjct: 356 EAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALV 415

Query: 655 II----------HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            +          H + +  ++ + V+WT+L++G  Q    +E++  F +M  +D+KP+  
Sbjct: 416 TLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGV 475

Query: 705 TMSSLLQTCGGLGLLQNG-KEIHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREVF 761
           T   +L  C   G ++ G    H +   +G   I D Y  T +ID+YS+SG LK A E  
Sbjct: 476 TFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHY--TCMIDLYSRSGRLKEAEEFI 533

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
           +                                  +    PDAI +  LL+AC+  G +E
Sbjct: 534 K----------------------------------QMPMHPDAIGWGTLLSACRLRGDME 559

Query: 822 EG 823
            G
Sbjct: 560 IG 561



 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 208/488 (42%), Gaps = 73/488 (14%)

Query: 270 SFGGEVQELLEVWGELHGKGVIFR-SRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           S GG     + ++  L   G   R SRI ++ ++   + L    LG + H  +++ GF  
Sbjct: 114 SGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGV 173

Query: 328 DVHLKCALMNFYGK-------------------------------CRDVESANKLFSEVS 356
           +  +   L+  Y K                               C+ VE A +LF  ++
Sbjct: 174 NAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMT 233

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D  D + W  ++    +N     A+  FR M+F        T   +L AC  + A  +GK
Sbjct: 234 D-RDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGK 292

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           QIH Y++++  + N+ V + L+ MYS+   ++ A   F  M   N+ SW ++I  Y   G
Sbjct: 293 QIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNG 352

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  +F++M    I PD           FT GS                        
Sbjct: 353 CSEEAVRVFSEMQRDGIDPD----------DFTLGS------------------------ 378

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            V+ +   L  L+ G + H   L +GL + + V  +L+ +Y K   +++A  +FD M   
Sbjct: 379 -VISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFH 437

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           + V+W +L++GY   G       +  +M  +++KPD V++  ++S  S  G  ++     
Sbjct: 438 DQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYF 497

Query: 657 HHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
           H M K+ GI P    +T +I    ++   +E+ +F  QM    + P++    +LL  C  
Sbjct: 498 HSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMP---MHPDAIGWGTLLSACRL 554

Query: 716 LGLLQNGK 723
            G ++ G+
Sbjct: 555 RGDMEIGQ 562



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 200/463 (43%), Gaps = 52/463 (11%)

Query: 161 SHKPNSITNSPTSLALPPTDTLAKQAQLSC--ISSGFCFLNETNKFRCLSSVKSKHAQMI 218
           S +P+ IT S   +A       A   Q  C  +  GF      N F   S +   +A+M 
Sbjct: 135 SVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGF----GVNAF-VGSPLVGMYAKMG 189

Query: 219 KMG---KIWNSDD-----MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
            +G   ++++  D     M  ++I   L       A + F +   R    W++ +  +  
Sbjct: 190 LIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQ 249

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
            G E Q L   +  +  +G+         IL  C  L A   G ++HA +I+  +D +V 
Sbjct: 250 NGLESQAL-NFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVF 308

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  AL++ Y KCR ++ A   F  +S  ++ + W  +I+   +N   E A+++F EMQ  
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMS-CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRD 367

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                  T+  ++ +CA + +  EG Q H   L S L   ++V N L+++Y +   +E A
Sbjct: 368 GIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDA 427

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            R+FD M  H+  SW ++++ Y   G       LF KM +  ++PD +T+          
Sbjct: 428 HRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTF---------- 477

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                 + +L      GF   G S    +Q            + HG +  +    D Y  
Sbjct: 478 ------IGVLSACSRAGFVEKGCSYFHSMQ------------KDHGIVPID----DHY-- 513

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKG 612
           T ++D+Y ++  L+ A+E    M  + + + W +L+S    +G
Sbjct: 514 TCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/661 (34%), Positives = 353/661 (53%), Gaps = 42/661 (6%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            + +H  ++   L  N S+   L+  Y+    +  A +VFD + + N+   N MI SY   
Sbjct: 59   RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G+      +F  M    ++PD  T+ C+L      G+                       
Sbjct: 119  GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT----------------------- 155

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
                        +  GR+ HG   + GL   L+VG  L+ MY K   L  A+ V D M  
Sbjct: 156  ------------IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            R++V+WNSL+ GY     F +A ++  +ME  +I  D  +  SL+   S    + E ++ 
Sbjct: 204  RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS--NTTTENVMY 261

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
            +  M       ++V+W  +I   ++N    E+++ + +M+ +  +P++ +++S+L  CG 
Sbjct: 262  VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
               L  GK+IH    +   I +  +   LIDMY+K G L+ AR+VF    ++ + SW  M
Sbjct: 322  TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I  +   G G +A+ LF +L ++G  PD+I F   LAAC ++GL+EEG   F  M+  Y 
Sbjct: 382  ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 441

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P +EH +CMVDLLG+AG + EA+ FI+ M  +P+  +WGALLG+CR+H   +   +A+
Sbjct: 442  ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAA 501

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
             +LF+L P  S  Y L+ N+ A + RWE+V  +R+ M   G+K     S +++++I+H F
Sbjct: 502  DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                  HP + EIY EL  LV +MK+LGYVPD+     D++EE+K   L  H+EKLAIV+
Sbjct: 562  LVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVF 621

Query: 1016 GLMKTK-----SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
             LM TK     S   IR+ KN R+C DCH AAK +S +  REI +RD  RFH FR G CS
Sbjct: 622  ALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCS 681

Query: 1071 C 1071
            C
Sbjct: 682  C 682



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 241/544 (44%), Gaps = 65/544 (11%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VH+ +I      +  L   LM  Y   +DV SA K+F E+ +  + ++ N +I   + N 
Sbjct: 61  VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE-RNVIIINVMIRSYVNNG 119

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +   +K+F  M   + +    T   +L+AC+  G    G++IHG   K  L S L V N
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+SMY +   L  A  V D M   ++ SWNS++  Y      D A  +  +M S +I  
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239

Query: 496 D---------------------------------IITWNCLLSGHFTHGSYQNVLTLLRG 522
           D                                 +++WN ++  +  +      + L   
Sbjct: 240 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M++ GF P+  S++ VL A  +   L  G++ HGYI R  L  +L +  +L+DMY K  C
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           L+ A++VF+NMK+R++V+W ++IS Y F G   +A  + +++++  + PD +++ + ++ 
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419

Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S  G  +E       M +   I P +     ++    +    +E+ +F   M  E   P
Sbjct: 420 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME---P 476

Query: 702 NSTTMSSLLQTC-----GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           N     +LL  C       +GLL   K       ++G+    YV   L ++Y+K+G  + 
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY----YVL--LSNIYAKAGRWEE 530

Query: 757 AREV--------FRKSANKTLASWNCMIMGFAIYGNG--------KEAILLFHELLETGF 800
              +         +K+   +    N +I  F +            +E  +L  ++ E G+
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGY 590

Query: 801 QPDA 804
            PD+
Sbjct: 591 VPDS 594



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 9/309 (2%)

Query: 250 FFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
           FF    +S   W+  +  Y      V E +E++  +   G    +  +T +L  C    A
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPV-EAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
             LG ++H  + ++    ++ L+ AL++ Y KC  +E A  +F  +    D + W  +I 
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS-RDVVSWTAMIS 383

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALE 428
               + +  +A+ LF ++Q S     S   V  L AC+  G   EG+     +     + 
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             L    C++ +  R  K++ A R    M  + N   W +++ +       D+     +K
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503

Query: 488 MNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
           +   ++ P+   +  LLS  +   G ++ V  +   M+S G + N  + +V +  +    
Sbjct: 504 L--FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561

Query: 547 LLKYGRESH 555
           L+  G  SH
Sbjct: 562 LV--GDRSH 568


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
            mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/648 (35%), Positives = 349/648 (53%), Gaps = 52/648 (8%)

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL-GYVDVAWSLFNK 487
            S++   N  I+ + R   LE A  VF+ M      +WN+M+S YT + G V  A  LF+K
Sbjct: 71   SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            +     +PD +++N +L  +      +  L     M                        
Sbjct: 131  IP----EPDSVSYNIMLVCYLRSYGVKAALAFFNKMPV---------------------- 164

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
                              D+    +L+  + +N  +Q A ++F  M  +N V+W+++ISG
Sbjct: 165  -----------------KDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISG 207

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
            Y   G    A+++   +  + +    V   ++++GY  +G+ + A  I   M       N
Sbjct: 208  YVEHGDLEAAEELYKNVGMKSV----VVETAMLTGYMKFGKVELAERIFQRMA----VKN 259

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +VTW S+I+G ++N    + LK F  M +  ++PN  ++SS+L  C  L  L  G+++H 
Sbjct: 260  LVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQ 319

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            L  K+   KD    T LI MY K G+L SA ++F +   K + +WN MI G+A +G G++
Sbjct: 320  LVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRK 379

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF ++     +PD ITF A++ AC ++G V+ G +YF SM  ++ I     HY+C++
Sbjct: 380  ALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVI 439

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG LDEA   I+ MPF P A I+G LLG+CRIH +L+ AE A+R L  L+P ++ 
Sbjct: 440  DLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSAT 499

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y  + N+ A +N+W+ V ++R  M E  V  +  +SWI+I  + H F +    HP    
Sbjct: 500  GYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTS 559

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I+ +L  L  +MK  GYVPD      D++EE K K+LL H+EKLAI +GLMKT    PIR
Sbjct: 560  IHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIR 619

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V KN RVC DCH A K++S +  REI +RD  RFHHFR G CSC D W
Sbjct: 620  VFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 106/482 (21%), Positives = 192/482 (39%), Gaps = 89/482 (18%)

Query: 234 IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFR 293
           I  ++   D  SA   F     R+   W++ L  Y    G+V+E  E++ ++     +  
Sbjct: 80  IASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSV-- 137

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
                                            +++ L C L + YG    V++A   F+
Sbjct: 138 --------------------------------SYNIMLVCYLRS-YG----VKAALAFFN 160

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           ++  ++D   WN +I    +N + + A  LF  M   +  + S     M+    + G   
Sbjct: 161 KMP-VKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWS----AMISGYVEHGDLE 215

Query: 414 EGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             ++++  V +KS +     V   +++ Y +  K+ELA R+F  M   NL +WNSMI+ Y
Sbjct: 216 AAEELYKNVGMKSVV-----VETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGY 270

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                 +    +F  M  SR++                                   PN 
Sbjct: 271 VENCRAEDGLKVFKTMIESRVR-----------------------------------PNP 295

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            S+S VL   + L  L  GR+ H  + ++ L  D    TSL+ MY K   L +A ++F  
Sbjct: 296 LSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLE 355

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           M  ++++ WN++ISGY   G    A  + ++M    +KPD +++ +++   +  G     
Sbjct: 356 MPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLG 415

Query: 653 LVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           +     MK   GI    V +T +I    +     E++    +M      P++    +LL 
Sbjct: 416 VQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP---FTPHAAIYGTLLG 472

Query: 712 TC 713
            C
Sbjct: 473 AC 474



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 3/227 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y++FG    A + F     ++   W+S +  Y       ++ L+V+  +    V 
Sbjct: 234 AMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE-NCRAEDGLKVFKTMIESRVR 292

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L+ +L  C+ L A  LG ++H  + K     D     +L++ Y KC D++SA KL
Sbjct: 293 PNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKL 352

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+   +D + WN +I    ++     A+ LF +M+  + K    T V ++ AC   G 
Sbjct: 353 FLEMPR-KDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGF 411

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
              G Q    + K   +E+      C+I +  R  +L+ A  +   M
Sbjct: 412 VDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 938

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 255/896 (28%), Positives = 433/896 (48%), Gaps = 73/896 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            H   IK G I+  D  V +   H Y  +G  ++A K F     R+   W+S +  Y S  
Sbjct: 82   HGFAIKCGLIY--DVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSY-SDN 138

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G  +E++  +  +  +G+      + +++  C  LM   LG ++    +K G +  V   
Sbjct: 139  GSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAA 198

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             +L+  +G C D+  A  +F+E+++  D + WN II    +N   E + + F  M+    
Sbjct: 199  NSLIFMFGGCGDINEACSIFNEMNE-RDTISWNSIISANAQNTLHEESFRYFHWMRLVHE 257

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +    T+  +L  C  V     GK +HG  +K  LESN+ +CN L+S+YS   + + A  
Sbjct: 258  EINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAEL 317

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            +F  M +                                    D+I+WN +L+ +   G 
Sbjct: 318  IFRRMPER-----------------------------------DLISWNSMLACYVQDGR 342

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                L +   M  +    N  + +  L A  +      G+  HG+++  GL  +L +G +
Sbjct: 343  CLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNT 402

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK-- 630
            L+  Y K   +  A++VF  M   + V WN+LI G+        A      M E      
Sbjct: 403  LITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV 462

Query: 631  ---------------PDLVSW------NSLVSGYSIWGQSKEALVIIH----------HM 659
                            DL+ +      +++V+G+ +    + +L+ ++          ++
Sbjct: 463  DYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYI 522

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
             +  ++     W ++I+ + +     E+LK  ++M+   I+ +    S+ L     L +L
Sbjct: 523  FDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAML 582

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
            + G+++H   +K GF  D ++    +DMY K G L  A  +  +  +++  SWN +I   
Sbjct: 583  EEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIS 642

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A +G   +A   FH++L+ G +P+ ++F  LL+AC + GLV+EG  Y+ SM++ Y I P 
Sbjct: 643  ARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPG 702

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            IEH  CM+DLLG++G L EA  FI  MP  P+  +W +LL SCRI+ +L+    A++ L 
Sbjct: 703  IEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLL 762

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +L+P + + Y L  N+ A   RWEDVE +R  M    ++     SW++    + +F    
Sbjct: 763  ELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGD 822

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP   +I  +L  L+  + + GYVPDT    QD DEE+K   + SH+E++A+ +GL+ 
Sbjct: 823  QTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLIN 882

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                + +R+ KN RVC DCH+  K++S V GR+I LRD  RFHHF  G CSC+D W
Sbjct: 883  IPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 168/711 (23%), Positives = 310/711 (43%), Gaps = 97/711 (13%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y +FG    A   F     R+ A W+  +  Y   G  V+ +L  + ++ G G+     +
Sbjct: 2   YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVL-FFRDICGIGIKPSGFM 60

Query: 297 LTIILKLCTK--LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           +  ++  C K  +MA   G + H   IK G  +DV +  + ++FY     V +A K+F+E
Sbjct: 61  IASLVTACNKSSIMA-KEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           + D  + + W  +++    N   +  I  ++ M+          I  ++ +C  +     
Sbjct: 120 MPD-RNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIIL 178

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G Q+ G+ LK  LE+ +S  N LI M+                                G
Sbjct: 179 GHQLLGHALKFGLETKVSAANSLIFMFG-------------------------------G 207

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            G ++ A S+FN+MN    + D I+WN ++S +  +  ++        M+ +    N ++
Sbjct: 208 CGDINEACSIFNEMN----ERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTT 263

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
           +S++L     +  LK+G+  HG  ++ GL+ ++ +  +L+ +Y      ++A+ +F  M 
Sbjct: 264 LSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP 323

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEI----------------------- 629
            R++++WNS+++ Y   G  + A K+  +M   ++EI                       
Sbjct: 324 ERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKI 383

Query: 630 ----------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                     + +L+  N+L++ Y    +  EA  +   M       + VTW +LI G  
Sbjct: 384 LHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPK----LDKVTWNALIGGFA 439

Query: 680 QNENYRESLKFFIQMQQEDIKP-NSTTMSSLLQTC-GGLGLLQNGKEIHCLCLKNGFIKD 737
            N    E++  F  M++      +  T+ ++L +C     L++ G  IH   +  GF  D
Sbjct: 440 NNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLD 499

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            +V + LI MY+K G+L S+  +F +   KT + WN +I   A YG G+EA+ L   +  
Sbjct: 500 QHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRS 559

Query: 798 TGFQPDAITFTALLAACKNSGLVEEGWKYFDS-----MSTDYNIIPTIEHYSCMVDLLGK 852
            G + D   F+  L+   +  ++EEG +   S        D+ II      +  +D+ GK
Sbjct: 560 AGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFII------NAAMDMYGK 613

Query: 853 AGYLDEAWDFIRTMPFKPDAT--IWGALLGSCRIHGHLEYAEIASRRLFKL 901
            G LD+A   +R +P   D +   W  L+     HG    A+     + KL
Sbjct: 614 CGELDDA---LRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKL 661



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 226/490 (46%), Gaps = 47/490 (9%)

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y+  G ++ A  +F++M+    + +  +WN ++SG+   GSY   +   R +  +G +P+
Sbjct: 2   YSKFGRINYAQLVFDRMS----ERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPS 57

Query: 532 GSSVSVVLQAVTELRLL-KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           G  ++ ++ A  +  ++ K G + HG+ ++ GL YD++VGTS +  Y     + NAQ++F
Sbjct: 58  GFMIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMF 117

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI--------------------- 629
           + M +RN+V+W SL+  Y   G          +M  E I                     
Sbjct: 118 NEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDII 177

Query: 630 --------------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                         +  + + NSL+  +   G   EA  I + M       + ++W S+I
Sbjct: 178 LGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNER----DTISWNSII 233

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
           S + QN  + ES ++F  M+    + N TT+S LL  CG +  L+ GK +H L +K G  
Sbjct: 234 SANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLE 293

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
            +  +   L+ +YS +G  K A  +FR+   + L SWN M+  +   G    A+ +F E+
Sbjct: 294 SNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEM 353

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           L    + + +TFT+ LAAC +      G K          +   +   + ++   GK   
Sbjct: 354 LWMKKEINYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHK 412

Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
           + EA    + MP K D   W AL+G    +  L  A +A+ +L +    +  +Y  ++N+
Sbjct: 413 MAEAKKVFQRMP-KLDKVTWNALIGGFANNAELNEA-VAAFKLMREGSTSGVDYITIVNI 470

Query: 916 LAMSNRWEDV 925
           L      ED+
Sbjct: 471 LGSCLTHEDL 480


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700-like
            [Glycine max]
          Length = 778

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 251/828 (30%), Positives = 404/828 (48%), Gaps = 92/828 (11%)

Query: 288  KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
            +G I R+ +L +I K CT    F    E HA LI+ G+  D+     L            
Sbjct: 3    RGDISRNTLLALISKACT----FPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRH 58

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM---------QFSSAKAISRT 398
            A  LF  V   + D+    +++         ++I  +  +          F+ A AIS +
Sbjct: 59   ARALFFSVP--KPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISAS 116

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
                L  C           +H + +    +SNL V + L+ +Y + +++  A +VFD M 
Sbjct: 117  PDDNLGMC-----------LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMP 165

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
            D                                    D + WN +++G   +  Y + + 
Sbjct: 166  DR-----------------------------------DTVLWNTMITGLVRNCCYDDSVQ 190

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
            + + M + G R + ++V+ VL AV E++ +K G       L+ G  +D YV T L+ ++ 
Sbjct: 191  VFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFS 250

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
            K + +  A+ +F  ++  ++V++N+LISG+   G    A K   ++     +    +   
Sbjct: 251  KCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVG 310

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSG--IYPNVVT-------------------------- 670
            L+   S +G    A  I      SG  + P+V T                          
Sbjct: 311  LIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKT 370

Query: 671  ---WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
               W ++ISG  Q+     ++  F +M   +  PN  T++S+L  C  LG L  GK +H 
Sbjct: 371  VAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQ 430

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            L       ++ YV+T LIDMY+K GN+  A ++F  ++ K   +WN MI G+ ++G G E
Sbjct: 431  LIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDE 490

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF+E+L  GFQP ++TF ++L AC ++GLV EG + F +M   Y I P  EHY+CMV
Sbjct: 491  ALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMV 550

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            D+LG+AG L++A +FIR MP +P   +WG LLG+C IH     A +AS RLF+L+P N  
Sbjct: 551  DILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVG 610

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y L+ N+ ++   +     +R ++ +  +      + I+++   HVF      H  T  
Sbjct: 611  YYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTS 670

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY +L  L  +M+++GY  +T     D++EEEK  +   H+EKLAI +GL+ T+    IR
Sbjct: 671  IYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIR 730

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +IKN RVC DCH A K++S +  R I +RD  RFHHF++G CSC D W
Sbjct: 731  IIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 231/507 (45%), Gaps = 54/507 (10%)

Query: 214 HAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA  +  G  ++S+  V S L+  Y +F     A K F     R    W++ +       
Sbjct: 126 HAHAVVDG--FDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMIT------ 177

Query: 273 GEVQ-----ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           G V+     + ++V+ ++  +GV   S  +  +L    ++    +G+ +    +K GF F
Sbjct: 178 GLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHF 237

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           D ++   L++ + KC DV++A  LF  +    D + +N +I     N + E A+K FRE+
Sbjct: 238 DDYVLTGLISVFSKCEDVDTARLLFGMIRK-PDLVSYNALISGFSCNGETECAVKYFREL 296

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
             S  +  S T+V ++   +  G  H    I G+ +KS      SV   L ++YSR N++
Sbjct: 297 LVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEI 356

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
           +LA ++FD   +  +++WN+MIS Y   G  ++A SLF +M ++   P+ +T        
Sbjct: 357 DLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVT-------- 408

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                                      ++ +L A  +L  L +G+  H  I    L+ ++
Sbjct: 409 ---------------------------ITSILSACAQLGALSFGKSVHQLIKSKNLEQNI 441

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           YV T+L+DMY K   +  A ++FD    +N V WN++I GY   G    A K+ N+M   
Sbjct: 442 YVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHL 501

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRE 686
             +P  V++ S++   S  G  +E   I H M N   I P    +  ++    +     +
Sbjct: 502 GFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEK 561

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +L+F  +M    ++P      +LL  C
Sbjct: 562 ALEFIRKMP---VEPGPAVWGTLLGAC 585



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 126/305 (41%), Gaps = 26/305 (8%)

Query: 169 NSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDD 228
           +S T + L P  +      L+C   GFC                     +K G I     
Sbjct: 304 SSSTMVGLIPVSSPFGHLHLACCIQGFC---------------------VKSGTILQPS- 341

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  +L   Y    +   A + F     ++ A W++ +  Y    G  +  + ++ E+   
Sbjct: 342 VSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQ-SGLTEMAISLFQEMMTT 400

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
                   +T IL  C +L A   G  VH  +  +  + ++++  AL++ Y KC ++  A
Sbjct: 401 EFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEA 460

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
           ++LF   S+ ++ + WN +I     +   + A+KLF EM     +  S T + +L AC+ 
Sbjct: 461 SQLFDLTSE-KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSH 519

Query: 409 VGAFHEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWN 466
            G   EG +I H  V K  +E       C++ +  R  +LE A      M  +   + W 
Sbjct: 520 AGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWG 579

Query: 467 SMISS 471
           +++ +
Sbjct: 580 TLLGA 584


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/672 (34%), Positives = 357/672 (53%), Gaps = 48/672 (7%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS--SYTGLGYVDVAWSLFNKMNSSR 492
            N L++ Y RN   + A  +F  M   +L+S+N++IS  S       D A +L     S  
Sbjct: 52   NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAAL----ASIP 107

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
              P ++++  LL G+  HG   + + L + M       N  S +V+L       LL  GR
Sbjct: 108  FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGG-----LLDAGR 158

Query: 553  ESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
             +    L + + D D+   T+++  Y +   +  A+ +FD M  RN+V+W ++ISGY   
Sbjct: 159  VNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN 218

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP----- 666
            G    A+K+   M E     + VSW +++ GY   G  ++A  + + M    +       
Sbjct: 219  GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMM 274

Query: 667  ----------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                  +  TW+++I    QNE   E+L  F +M    ++PN  
Sbjct: 275  VGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP 334

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            ++ S+L  C  L +L  G+E+H   L+  F  D +  + LI MY K GNL  A+ VF   
Sbjct: 335  SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K +  WN MI G+A +G G++A+ +FH++   G  PD IT+   L AC  +G V+EG 
Sbjct: 395  EPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGR 454

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            + F+SM+ + +I P  EHYSCMVDLLG++G ++EA+D I+ MP +PDA IWGAL+G+CR+
Sbjct: 455  EIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRM 514

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H + E AE A+++L +LEP N+  Y L+ ++     RWED  ++R  +    +      S
Sbjct: 515  HRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCS 574

Query: 945  WIQIDQIVHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            WI+ D+ VH+F S +   HP    I   L  L   + + GY  D   V  DIDEE+K   
Sbjct: 575  WIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHS 634

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+E+ A+ YGL+K     PIRV+KN RVC DCH+A K ++ +  REI LRD  RFHH
Sbjct: 635  LRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHH 694

Query: 1064 FREGECSCNDCW 1075
            F++G CSC D W
Sbjct: 695  FKDGFCSCRDYW 706



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEV---QELLEVWGELHGK 288
           +++  Y + G  T A   F     R+   W++ +  Y    GEV   ++L EV  E   +
Sbjct: 179 AMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQ-NGEVNLARKLFEVMPE---R 234

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
             +  + +L   ++           VE  A L     +  V    A+M  +G+   V++A
Sbjct: 235 NEVSWTAMLVGYIQAGH--------VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAA 286

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F ++ +  DD  W+ +I    +NE    A+  FREM +   +    +++ +L  CA 
Sbjct: 287 KTVFEKMCE-RDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +     G+++H  +L+ + + ++   + LI+MY +   L+ A RVF + +  ++  WNSM
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           I+ Y   G  + A  +F+ M  + + PD IT+
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 28/299 (9%)

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           ++ A+  F+ M  R   ++N+L++GY    L   A  +  +M       DL S+N+L+SG
Sbjct: 33  IEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR----DLASYNALISG 88

Query: 643 YSIWGQS-KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S+  Q+  +A   +  +      P+VV++TSL+ G +++    ++++ F QM +     
Sbjct: 89  LSLRRQTLPDAAAALASIP---FPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER---- 141

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI-KDAYVATGLIDMYSKSGNLKSAREV 760
           N  + + LL      GLL  G+      L +    +D    T ++  Y ++G +  AR +
Sbjct: 142 NHVSYTVLLG-----GLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
           F +   + + SW  MI G+A  G     + L  +L E   + + +++TA+L     +G V
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGE----VNLARKLFEVMPERNEVSWTAMLVGYIQAGHV 252

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           E+  + F++M       P     + MV   G+ G +D A      M  + D T W A++
Sbjct: 253 EDAAELFNAMPEH----PVAACNAMMVG-FGQRGMVDAAKTVFEKMCERDDGT-WSAMI 305



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 6/229 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  + + G   +A   F     R    WS+ ++ YE     + E L  + E+  +GV 
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQ-NEFLMEALSTFREMLWRGVR 330

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  IL +C  L     G EVHA++++  FD DV    AL+  Y KC +++ A ++
Sbjct: 331 PNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRV 390

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F    + +D ++WN +I    ++   E A+ +F +M+ +       T +  L AC+  G 
Sbjct: 391 F-HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGK 449

Query: 412 FHEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
             EG++I +   + S++       +C++ +  R+  +E A   FD +K+
Sbjct: 450 VKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEA---FDLIKN 495


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/613 (36%), Positives = 339/613 (55%), Gaps = 28/613 (4%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N +IS ++ +  + LA   FD   + +  SWN M+++Y   G V+ A  LFN    SR +
Sbjct: 135  NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTE 190

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D+I+WN L+SG+   G       L   M      P    VS        + +  Y R  
Sbjct: 191  WDVISWNALMSGYVQWGKMSEARELFDRM------PGRDVVS------WNIMVSGYARRG 238

Query: 555  HGYILRNGLD----YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
                 R   D     D++  T+++  Y +N  L+ A+ VFD M  RN V+WN++++ Y  
Sbjct: 239  DMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQ 298

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
            + +   AK++ N M    +     SWN++++GY+  G  +EA  +   M       + V+
Sbjct: 299  RRMMDEAKELFNMMPCRNV----ASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVS 350

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W ++++   Q     E+L+ FI+M +     N +  + +L TC  +  L+ G ++H   +
Sbjct: 351  WAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLI 410

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            + G+    +V   L+ MY K GN++ AR  F +   + + SWN MI G+A +G GKEA+ 
Sbjct: 411  RAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALE 470

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            +F  +  T  +PD IT   +LAAC +SGLVE+G  YF SM  D+ +    EHY+CM+DLL
Sbjct: 471  IFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLL 530

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG L EA D ++ MPF+PD+T+WGALLG+ RIH + E    A+ ++F+LEP N+  Y 
Sbjct: 531  GRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYV 590

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A S +W D  ++R  M+E GVK V  +SWI++   VH FSA    HP   +IY 
Sbjct: 591  LLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYA 650

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L   MKK GYV  T  V  D++EEEK  +L  H+EKLA+ YG++      PIRVIK
Sbjct: 651  FLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIK 710

Query: 1031 NTRVCSDCHTAAK 1043
            N RVC DCH A K
Sbjct: 711  NLRVCGDCHNAFK 723



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 203/451 (45%), Gaps = 24/451 (5%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           VE    L     ++DV    ALM+ Y +   +  A +LF  +    D + WN ++    R
Sbjct: 178 VEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPG-RDVVSWNIMVSGYAR 236

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                 A +LF             T   ++   A+ G   E ++    V  +  E N   
Sbjct: 237 RGDMVEARRLFDAAPVRDVF----TWTAVVSGYAQNGMLEEARR----VFDAMPERNAVS 288

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N +++ Y +   ++ A  +F+ M   N++SWN+M++ Y   G ++ A ++F+ M     
Sbjct: 289 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP---- 344

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           Q D ++W  +L+ +   G  +  L L   M   G   N S+ + VL    ++  L+ G +
Sbjct: 345 QKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 404

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG ++R G     +VG +L+ MY K   +++A+  F+ M+ R++V+WN++I+GY   G 
Sbjct: 405 LHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGF 464

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A ++ + M     KPD ++   +++  S  G  ++ +   + M +  G+      +T
Sbjct: 465 GKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT 524

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            +I    +     E+      M+    +P+ST   +LL    G   +    E+     + 
Sbjct: 525 CMIDLLGRAGRLAEAHDL---MKDMPFEPDSTMWGALL----GASRIHRNPELGRSAAEK 577

Query: 733 GF---IKDAYVATGLIDMYSKSGNLKSAREV 760
            F    ++A +   L ++Y+ SG  + AR++
Sbjct: 578 IFELEPENAGMYVLLSNIYASSGKWRDARKM 608



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 14/248 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y + G    A   F     +    W++ L  Y S GG  +E L+++ E+   G  
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAY-SQGGCSEETLQLFIEMGRCGEW 380

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L  C  + A   G+++H  LI+ G+     +  AL+  Y KC ++E A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+ +  D + WN +I    R+   + A+++F  M+ +S K    T+V +L AC+  G 
Sbjct: 441 FEEMEE-RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499

Query: 412 FHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +G        H + + +  E       C+I +  R  +L  A    D MKD      +
Sbjct: 500 VEKGISYFYSMHHDFGVTAKPEH----YTCMIDLLGRAGRLAEA---HDLMKDMPFEPDS 552

Query: 467 SMISSYTG 474
           +M  +  G
Sbjct: 553 TMWGALLG 560


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/781 (31%), Positives = 392/781 (50%), Gaps = 68/781 (8%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y+  G    A   F+       + W+  +  + +  G+    L  + ++ G GV      
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGF-TMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              ++K C  L +  +G  VH ++   G   DV +  +L+  Y +   +  A  LF  + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             +D +LWN ++   ++N    NAIK+F EM+ S  K  S T   +L  CA       G 
Sbjct: 121 Q-KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+HG  +   LE +  V N L++MYS+   L+ A ++FD+                    
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSP------------------ 221

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                            Q D+++WN ++SG+  +G       L RGM S G +P+  + +
Sbjct: 222 -----------------QSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFA 264

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             L  V EL  LK+ +E HGYI+R+ +  D+++ ++L+D+Y K   ++ AQ++     + 
Sbjct: 265 SFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSF 324

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---SGYSIWGQSKE-- 651
           + V   ++ISGY   G    A +    + +E +KP  V+++S+    +G +     KE  
Sbjct: 325 DTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELH 384

Query: 652 --------------------------ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                                      L +   + N     + + W S+I+   QN    
Sbjct: 385 GSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPG 444

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           E++  F QM  E  + +  ++S  L  C  L  L  GKEIH L +K     D Y  + LI
Sbjct: 445 EAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLI 504

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
           DMY+K GNL  +R VF +   +   SWN +I  +  +G+ KE + LFHE+L  G QPD +
Sbjct: 505 DMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHV 564

Query: 806 TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
           TF  +++AC ++G V+EG +Y+  M+ +Y I   +EHY+C+ D+ G+AG LDEA++ I +
Sbjct: 565 TFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINS 624

Query: 866 MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
           MPF PDA +WG LLG+C IHG++E AE+AS+ LF L+P NS  Y L+ N+ A + +W  V
Sbjct: 625 MPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKV 684

Query: 926 ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
            ++R  M E GV+ V  +SWI+++   H+F A    HP T +IY  L  L+ E+KK GYV
Sbjct: 685 LKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYV 744

Query: 986 P 986
           P
Sbjct: 745 P 745



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 215/483 (44%), Gaps = 78/483 (16%)

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY R   L+ A  +F +++    S+WN MI  +T +G  + A   + KM  + + PD  T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           +                                     V++A   L+ +K G+  H  + 
Sbjct: 61  F-----------------------------------PYVVKACCGLKSVKMGKIVHETVN 85

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
             GL  D++VG+SL+ +Y +N  L +AQ +FDN+  ++ V WN +++GY   G   NA K
Sbjct: 86  LMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145

Query: 620 MLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQSK------------------- 650
           +  +M   EIKP+ V++  ++S          G  + G +                    
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYS 205

Query: 651 --EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             + L     + ++    ++V+W  +ISG +QN    E+   F  M    IKP+S T +S
Sbjct: 206 KCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFAS 265

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            L     L  L++ KEIH   +++  + D ++ + LID+Y K  +++ A+++  +S++  
Sbjct: 266 FLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFD 325

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
                 MI G+ + G  KEA+  F  L++   +P ++TF+++  A      +  G +   
Sbjct: 326 TVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHG 385

Query: 829 SMSTDYNIIPTIEHYSCMV-----DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
           S      II T     C V     D+  K G LD A      +  K DA  W +++ SC 
Sbjct: 386 S------IIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK-DAICWNSMITSCS 438

Query: 884 IHG 886
            +G
Sbjct: 439 QNG 441


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 256/881 (29%), Positives = 427/881 (48%), Gaps = 78/881 (8%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
            +L+  Y   G   +A + F+    R+   W++ +    S  G ++E L  +  +  +GV+
Sbjct: 84   ALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS-NGCMEEALVAYRRMRKEGVM 142

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
              +  L  ++ LC  L     G++V A ++  G    V +  +L+  +G  R V+ A +L
Sbjct: 143  CNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERL 202

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F  + +  D + WN +I +    E +     +  +M+    K    T+  ++  CA    
Sbjct: 203  FDRMEE-RDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDL 261

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               G  IH   + S L  ++ + N L++MYS   KL                        
Sbjct: 262  VALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL------------------------ 297

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL-TLLRGMQSLGFRP 530
                   D A SLF  M+    + D+I+WN ++S +    S    L TL + +Q+    P
Sbjct: 298  -------DEAESLFRNMS----RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPP 346

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  + S  L A +    L  GR  H  IL+  L   L +G SL+ MY K + +++ + VF
Sbjct: 347  NSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVF 406

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------------- 636
            ++M   ++V+ N L  GY       NA ++ + M    IKP+ ++               
Sbjct: 407  ESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLH 466

Query: 637  ----------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                                  NSL++ Y+  G  + +  I   + N     +V++W ++
Sbjct: 467  SYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNK----SVISWNAI 522

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+ ++++    E++K F+  Q    K +   ++  L +   L  L+ G ++H L +KNG 
Sbjct: 523  IAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGL 582

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              D++V    +DMY K G +    +     A++    WN +I G+A YG  KEA   F  
Sbjct: 583  DCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKH 642

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            ++  G +PD +TF ALL+AC ++GL+++G  Y++SM+  + + P I+H  C+VDLLG+ G
Sbjct: 643  MVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLG 702

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
               EA  FI  MP  P+  IW +LL S R H +L+    A++ L +L+P + + Y L+ N
Sbjct: 703  KFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSN 762

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            L A + RW DV++LR  M  + +      SW+++   V  F      H    +IY +L  
Sbjct: 763  LYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDE 822

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            ++ +++++GYV DT     D DEE+K   L +H+EKLA+ YGL+     + IR+ KN RV
Sbjct: 823  ILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRV 882

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C+DCH   K +S+V  REI LRD  RFH F+ G CSC+D W
Sbjct: 883  CADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 148/616 (24%), Positives = 272/616 (44%), Gaps = 77/616 (12%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA   + G   +V++  AL++ YG    V +A +LF E+    + + W  I++   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQ-RNVVSWTAIMVALS 121

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N   E A+  +R M+       +  +  ++  C  +     G Q+  +V+ S L +++S
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS 181

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N LI+M+    +++ A R+FD M++ +  SWN+MIS Y+        + + + M    
Sbjct: 182 VANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGE 241

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++PD+ T   L+S                                         L+  G 
Sbjct: 242 VKPDVTTLCSLVS-----------------------------------VCASSDLVALGS 266

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H   + +GL   + +  +L++MY     L  A+ +F NM  R++++WN++IS Y    
Sbjct: 267 GIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSN 326

Query: 613 LFVNAKKMLNQ-MEEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMKNSGIYP 666
             V A + L Q ++ +E  P+ ++++S +   S     + G++  A+++   ++N  +  
Sbjct: 327 SCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIG 386

Query: 667 N--------------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
           N                          VV+   L  G    E+   +++ F  M+   IK
Sbjct: 387 NSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIK 446

Query: 701 PNSTTMSSLLQTCGGLGLLQN-GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           PN  TM +L  TC  LG L + G  +H    + G + D Y+   LI MY+  G+L+S+  
Sbjct: 447 PNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTG 506

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           +F +  NK++ SWN +I     +G G+EAI LF +    G + D       L++  N   
Sbjct: 507 IFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLAS 566

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWG 876
           +EEG +    +S    +       +  +D+ GK G +D     ++T+P    +P    W 
Sbjct: 567 LEEGMQ-LHGLSVKNGLDCDSHVVNATMDMYGKCGKMD---CMLKTLPDPAHRP-TQCWN 621

Query: 877 ALLGSCRIHGHLEYAE 892
            L+     +G+ + AE
Sbjct: 622 TLISGYARYGYFKEAE 637



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/527 (22%), Positives = 212/527 (40%), Gaps = 77/527 (14%)

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES---- 554
           +W   +SG    G      TLLR M+      +G +++ ++ A  E R  + G       
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTAC-EHRGWQEGAACGAAI 66

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H    R GL  ++Y+GT+L+ +Y     + NAQ +F  M  RN+V+W +++      G  
Sbjct: 67  HALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCM 126

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE---ALVIIHHMKNSGIYPNV--- 668
             A     +M +E +   + + N+L +  S+ G  ++    L +  H+  SG+  +V   
Sbjct: 127 EEALVAYRRMRKEGV---MCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVA 183

Query: 669 ----------------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
                                       ++W ++IS     E Y +       M+  ++K
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           P+ TT+ SL+  C    L+  G  IH LC+ +G      +   L++MYS +G L  A  +
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESL 303

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFTALLAACKNSGL 819
           FR  + + + SWN MI  +    +  EA+    +LL+T    P+++TF++ L AC +   
Sbjct: 304 FRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEA 363

Query: 820 VEEG-------------------------WKYFDSMSTDYNI---IPTIEHYSCMVDLLG 851
           +  G                         +   +SM     +   +P  +  SC V   G
Sbjct: 364 LMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGG 423

Query: 852 KAGYLDEA-----WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            A   D A     + ++R    KP+      L G+C+  G L    +            S
Sbjct: 424 YAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLS 483

Query: 907 ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
             Y +  +L+ M     D+E        +  KSV+ W+ I    + H
Sbjct: 484 DEY-ITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRH 529



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 132/323 (40%), Gaps = 36/323 (11%)

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--YSIWGQSK 650
           M +R   +W + +SG    GL   A  +L  M E ++     +  SLV+   +  W +  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 651 EALVIIHHMKNSG-----IY---------------------------PNVVTWTSLISGS 678
                IH + +       +Y                            NVV+WT+++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
             N    E+L  + +M++E +  N+  +++++  CG L     G ++    + +G +   
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            VA  LI M+     ++ A  +F +   +   SWN MI  ++      +  ++  ++   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
             +PD  T  +L++ C +S LV  G     S+     +  ++   + +V++   AG LDE
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALG-SGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 859 AWDFIRTMPFKPDATIWGALLGS 881
           A    R M  + D   W  ++ S
Sbjct: 300 AESLFRNMS-RRDVISWNTMISS 321



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 5/260 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA + + G + + + +  SLI  Y   GD  S+   F    ++S   W++ +       G
Sbjct: 473 HAYVTQTG-LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRH-G 530

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
             +E ++++ +    G       L   L     L +   G+++H   +K G D D H+  
Sbjct: 531 RGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVN 590

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A M+ YGKC  ++   K   + +       WN +I    R   ++ A   F+ M     K
Sbjct: 591 ATMDMYGKCGKMDCMLKTLPDPAHRPTQ-CWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATR 452
               T V +L AC+  G   +G   +  +  +  +   +  C C++ +  R  K   A +
Sbjct: 650 PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEK 709

Query: 453 VFDSMKD-HNLSSWNSMISS 471
             D M    N   W S++SS
Sbjct: 710 FIDEMPVLPNDLIWRSLLSS 729


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya wallichii]
          Length = 710

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/672 (34%), Positives = 361/672 (53%), Gaps = 79/672 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F  +     +P+++ WN +  GH       + L L   M SLG  PN
Sbjct: 50   FDGLPY---AISVFETIQ----EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPN 102

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L++  + +  + G++ HG++L+ G D DLYV TSL+ MYV+N  L++A++VFD
Sbjct: 103  CYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFD 162

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ---------------------------- 623
               +R++V++ +LI+GY  KG   +A+KM ++                            
Sbjct: 163  QSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALEL 222

Query: 624  ---MEEEEIKPD----------------------LVSW-------------NSLVSGYSI 645
               M +  ++PD                      + SW             N+L+  Y  
Sbjct: 223  FKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIK 282

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   +     Y +V++W +LI G      Y+E+L  F +M +    PN  T
Sbjct: 283  CGEVETACGLFEGLS----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 338

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            M S+L  C  LG ++ G+ IH    K   G    +   T LIDMY+K G++++A++VF  
Sbjct: 339  MLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDS 398

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              N++L+SWN MI GFA++G    A  +F  + +   +PD ITF  LL+AC +SG+++ G
Sbjct: 399  ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 458

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F SM  DY I P +EHY CM+DLLG +G   EA + I TM  +PD  IW +LL +C+
Sbjct: 459  RHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 518

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            ++ ++E  E  ++ L K+EP N  +Y L+ N+ A + RW +V ++R  +++ G+K V   
Sbjct: 519  MYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGC 578

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I+ID +VH F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K   
Sbjct: 579  SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 638

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RFHH
Sbjct: 639  LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 698

Query: 1064 FREGECSCNDCW 1075
            FR+G CSCND W
Sbjct: 699  FRDGVCSCNDYW 710



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 243/546 (44%), Gaps = 78/546 (14%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLI-FHYL--EFGDFTSAAKAFFLYFSRSYADW 261
           + L S++  HAQMIK G + N++  +  LI F  L   F     A   F      +   W
Sbjct: 13  KTLQSLRMIHAQMIKTG-LHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIW 71

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           ++    + +   +    L ++  +   G++        +LK C K  AF  G ++H  ++
Sbjct: 72  NTMFRGH-ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 130

Query: 322 KRGFDFDVHLKCALMNFY---GKCRD----------------------------VESANK 350
           K G+D D+++  +L++ Y   G+  D                            + SA K
Sbjct: 131 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 190

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F E+  ++D + WN +I         + A++LF+EM  ++ +    T+V ++ ACA+  
Sbjct: 191 MFDEIP-IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSA 249

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           +   G+Q+H ++      SNL + N LI +Y +  ++E A  +F+ +   ++ SWN++I 
Sbjct: 250 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIG 309

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            YT +     A  LF +M                               LR  +S    P
Sbjct: 310 GYTHMNLYKEALLLFQEM-------------------------------LRSGES----P 334

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILR--NGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           N  ++  +L A   L  ++ GR  H YI +   G+       TSL+DMY K   ++ AQ+
Sbjct: 335 NDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQ 394

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VFD++ NR++ +WN++I G+   G    A  + ++M + EI+PD +++  L+S  S  G 
Sbjct: 395 VFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGM 454

Query: 649 SKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                 I   MK    I P +  +  +I     +  ++E+ +    M+ E   P+     
Sbjct: 455 LDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME---PDGVIWC 511

Query: 708 SLLQTC 713
           SLL+ C
Sbjct: 512 SLLKAC 517


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/652 (35%), Positives = 352/652 (53%), Gaps = 76/652 (11%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            +P+ + WN +L G+       + L L   M SLG  PN  +   +L++  + +  + G++
Sbjct: 28   EPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQ 87

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA--------------------------- 586
             HG++L+ G + DLYV TSL+ MY +N  L++A                           
Sbjct: 88   IHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGN 147

Query: 587  ----QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------- 632
                QE+FD +  +++V+WN++ISGY   G +  A ++  +M +  ++PD          
Sbjct: 148  IRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSA 207

Query: 633  ------------LVSW-------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                        + SW             N+L+  YS  GQ + A  +   +       +
Sbjct: 208  CAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCK----D 263

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            VV+W +LI G      Y+E+L  F +M +    PN  T+ S+L  C  LG +  G+ IH 
Sbjct: 264  VVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHV 323

Query: 728  LCLKNGFIKDAYVA----TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
               K   +KD   A    T LIDMY+K G++++A +VF    +K+L+SWN MI GFA++G
Sbjct: 324  YIDKK--LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 381

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
                   LF  + + G +PD ITF  LL+AC +SG ++ G   F SM+ DY+I P +EHY
Sbjct: 382  RANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHY 441

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
             CM+DLLG +G   EA + I+TMP +PD  IW +LL +CR HG+LE AE  +R L K+EP
Sbjct: 442  GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEP 501

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             N  +Y L+ N+ A +  W++V ++R  ++  G+K V   S I+ID  VH F      HP
Sbjct: 502  ENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHP 561

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
               EIY  L  + + +++ G+VPDT  V Q+++EE K   L  H+EKLAI +GL+ TK  
Sbjct: 562  RNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPG 621

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              + ++KN RVC +CH A K +S +  REI  RD  RFHHFR+G CSCND W
Sbjct: 622  TKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 226/514 (43%), Gaps = 72/514 (14%)

Query: 240 FGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI 299
           F  F  A   F      +   W++ L  Y +   +    L+++  +   G++  S     
Sbjct: 13  FDGFPYAISVFATIQEPNQLIWNTMLRGY-ALSSDPVSALKLYVVMISLGLLPNSYTFPF 71

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS--- 356
           +LK C K  AF  G ++H  ++K G++ D+++  +L++ Y +   +E A+K+F   S   
Sbjct: 72  LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131

Query: 357 ---------------------------DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
                                       ++D + WN +I        ++ A++LF+EM  
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           ++ +    T+V +L ACA+  +   G+Q+H ++      SNL + N LI +YS+  ++E 
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  +F+ +   ++ SWN++I  YT +     A  LF +M                     
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEM--------------------- 290

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD--L 567
                     LR  +S    PN  ++  +L A   L  +  GR  H YI +   D     
Sbjct: 291 ----------LRSGES----PNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAP 336

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            + TSL+DMY K   ++ A +VF++M ++++ +WN++I G+   G       + ++M + 
Sbjct: 337 SLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKN 396

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRE 686
            I+PD +++  L+S  S  G+      I   M ++  I P +  +  +I     +  ++E
Sbjct: 397 GIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKE 456

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
           + +    M  E   P+     SLL+ C   G L+
Sbjct: 457 AKEMIKTMPME---PDGVIWCSLLKACRRHGNLE 487



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 142/277 (51%), Gaps = 4/277 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y   G+  SA + F     +    W++ +  Y    G  +E LE++ E+    V 
Sbjct: 137 ALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAE-TGSYKEALELFKEMMKTNVR 195

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C +  +  LG +VH+ +   GF  ++ +  AL++ Y KC  VE+A  L
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGL 255

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +S  +D + WN +I        ++ A+ LF+EM  S       TIV +L ACA +GA
Sbjct: 256 FEGLS-CKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGA 314

Query: 412 FHEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
              G+ IH Y+ K    + +  S+   LI MY++   +E A +VF+SM   +LSSWN+MI
Sbjct: 315 IDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 374

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             +   G  +  + LF++M  + I+PD IT+  LLS 
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSA 411



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 169/371 (45%), Gaps = 68/371 (18%)

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM---------------- 624
           D    A  VF  ++  N + WN+++ GY      V+A K+   M                
Sbjct: 14  DGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLL 73

Query: 625 ----------EEEEI---------KPDLVSWNSLVSGYSIWGQSKEA------------- 652
                     E ++I         +PDL    SL+S Y+  G+ ++A             
Sbjct: 74  KSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVV 133

Query: 653 --LVIIHHMKNSG------------IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
               +I    +SG               +VV+W ++ISG  +  +Y+E+L+ F +M + +
Sbjct: 134 SYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN 193

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           ++P+  TM ++L  C     ++ G+++H     +GF  +  +   LID+YSK G +++A 
Sbjct: 194 VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETAC 253

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            +F   + K + SWN +I G+      KEA+LLF E+L +G  P+ +T  ++L AC + G
Sbjct: 254 GLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLG 313

Query: 819 LVEEG-W--KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            ++ G W   Y D    D    P++   + ++D+  K G ++ A     +M  K  ++ W
Sbjct: 314 AIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSMLHKSLSS-W 370

Query: 876 GALLGSCRIHG 886
            A++    +HG
Sbjct: 371 NAMIFGFAMHG 381


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 950

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/726 (32%), Positives = 385/726 (53%), Gaps = 53/726 (7%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            ++KL     +S++  ++ +    +   +++G  +E ++    +   A+ S     N ++S
Sbjct: 3    SLKLILHRAYSTSTGVNNSF--EISRLSRIGQINEARKFFDSLRYKAIGS----WNSIVS 56

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
             Y  N     A ++FD M + N+ SWN ++S Y     ++ A ++F  M     + ++++
Sbjct: 57   GYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMP----ERNVVS 112

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
            W  ++ G+   G       L   M      P  + VS     V    L+  GR      L
Sbjct: 113  WTAMVKGYVQEGMVVEAELLFWRM------PERNEVS---WTVMFGGLIDGGRIDDARKL 163

Query: 560  RNGLD-YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
             + +   D+   T+++    +   +  A+E+FD M+ RN++ W ++I+GY        A+
Sbjct: 164  YDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVAR 223

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM------------------- 659
            K+   M E+      VSW S++ GY++ G+ ++A      M                   
Sbjct: 224  KLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVG 279

Query: 660  ---KNSGIYPNV-----VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
               K   ++  +      TW  +I    +     E+L+ F QMQ++ ++P+  ++ S+L 
Sbjct: 280  EIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILS 339

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             C  L  LQ G+++H   ++  F  D YVA+ L+ MY K G L  A+ VF +  +K +  
Sbjct: 340  VCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIM 399

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            WN +I G+A +G G+EA+ +FHE+  +G  P+ +T  A+L AC   G +EEG + F+SM 
Sbjct: 400  WNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESME 459

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            + + + PT+EHYSC VD+LG+AG +D+A + I +M  KPDAT+WGALLG+C+ H  L+ A
Sbjct: 460  SKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLA 519

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E+A+++LF++EP N+  Y L+ ++ A  ++W DV  +R +M    V      SWI++ + 
Sbjct: 520  EVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKK 579

Query: 952  VHVFSAEGAP-HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
            VH+F+  G   HP    I   L      +++ GY PD   V  D+DEEEK   L  H+E+
Sbjct: 580  VHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSER 639

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA+ YGL+K     PIRV+KN RVC DCH A K +S V  REI LRD  RFHHF  GECS
Sbjct: 640  LAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECS 699

Query: 1071 CND-CW 1075
            C D CW
Sbjct: 700  CRDYCW 705



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 14/257 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I    E G+   A + F     R  A W   ++ YE  G E+ E LE++ ++  +GV 
Sbjct: 270 AMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFEL-EALELFAQMQRQGVR 328

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  IL +C  L +   G +VHA L++  FD DV++   LM  Y KC ++  A  +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLV 388

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F      +D ++WN II     +   E A+K+F EM  S       T++ +L AC+  G 
Sbjct: 389 FDRFPS-KDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGK 447

Query: 412 FHEGKQIHGYVLKSALESNLSVC------NCLISMYSRNNKLELATRVFDSMK-DHNLSS 464
             EG +I       ++ES   V       +C + M  R  K++ A  + +SM    + + 
Sbjct: 448 LEEGLEIF-----ESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATV 502

Query: 465 WNSMISSYTGLGYVDVA 481
           W +++ +      +D+A
Sbjct: 503 WGALLGACKTHSRLDLA 519



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 96/192 (50%), Gaps = 1/192 (0%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A++   G+  ++  A ++F ++ D  D+  W  +I    R      A++LF +MQ    +
Sbjct: 270 AMIVALGEVGEIVKARRVFDQMED-RDNATWRGMIKAYERKGFELEALELFAQMQRQGVR 328

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               +++ +L  CA + +   G+Q+H ++++   + ++ V + L++MY +  +L  A  V
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLV 388

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           FD     ++  WNS+IS Y   G  + A  +F++M  S   P+ +T   +L+     G  
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKL 448

Query: 514 QNVLTLLRGMQS 525
           +  L +   M+S
Sbjct: 449 EEGLEIFESMES 460


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/777 (30%), Positives = 409/777 (52%), Gaps = 76/777 (9%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            +++ Y K  ++  A KLF  + +    + W  +I    +  +++ A +LF +MQ    + 
Sbjct: 89   MISGYVKSGNLGEARKLFDGMVE-RTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEP 147

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               T V +L  C      ++  Q+   ++K   +S L V N L+  Y ++N+L       
Sbjct: 148  DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRL------- 200

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
                                    D+A  LF +M     + D +++N +++G+   G  +
Sbjct: 201  ------------------------DLACQLFKEMP----EIDSVSYNAMITGYSKDGLDE 232

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
              + L   MQ+ G +P   + + VL A   L  +  G++ H ++++    ++++V  +L+
Sbjct: 233  KAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALL 292

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------- 627
            D Y K+D + +A+++FD M  ++ V++N +ISGY + G    A  +  +++         
Sbjct: 293  DFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQF 352

Query: 628  ------EIKPDLVSW----------------------NSLVSGYSIWGQSKEALVIIHHM 659
                   I  + + W                      NSLV  Y+  G+ +EA +I  ++
Sbjct: 353  PFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNL 412

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
             +    P    WT++IS  +Q   Y E L+ F +M+Q  +  +  T +SLL+    +  L
Sbjct: 413  THRSAVP----WTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 468

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
              GK++H   +K+GF+ + +  + L+D+Y+K G++K A + F++  ++ + SWN MI  +
Sbjct: 469  SLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAY 528

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A  G  +  +  F E++ +G QPD+++F  +L+AC +SGLVEEG  +F+SM+  Y + P 
Sbjct: 529  AQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPR 588

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
             EHY+ +VD+L ++G  +EA   +  MP  PD  +W ++L +CRIH + E A  A+ +LF
Sbjct: 589  REHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLF 648

Query: 900  KLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
             +E   ++A Y  M N+ A + +WE+V ++  +M + GVK +  +SW++I    H+FSA 
Sbjct: 649  NMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSAN 708

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
               HP   EI  ++  L   M++LGY PDT C   + DE+ K + L  H+E+LAI + L+
Sbjct: 709  DRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALI 768

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             T   +PI V+KN R C DCH A K +S + GREI +RD  RFHHFR+G CSC D W
Sbjct: 769  STPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 219/472 (46%), Gaps = 55/472 (11%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG ++H+ +IK  F ++V +  AL++FY K   V  A KLF E+ + +D + +N II   
Sbjct: 268 LGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE-QDGVSYNVIISGY 326

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             + K + A  LFRE+QF++          ML   +    +  G+QIH   + +  +S +
Sbjct: 327 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI 386

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N L+ MY++  K E A  +F ++   +   W +MIS+Y   G+ +    LFNKM  +
Sbjct: 387 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 446

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
            +  D  T+  LL                        R + S  S+ L           G
Sbjct: 447 SVIADQATFASLL------------------------RASASIASLSL-----------G 471

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           ++ H +I+++G   +++ G++L+D+Y K   +++A + F  M +RNIV+WN++IS Y   
Sbjct: 472 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN 531

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY---PNV 668
           G      K   +M    ++PD VS+  ++S  S  G  +E L   + M  + IY   P  
Sbjct: 532 GEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSM--TQIYKLDPRR 589

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
             + S++    ++  + E+ K   +M    I P+    SS+L  C     +   +E+   
Sbjct: 590 EHYASVVDMLCRSGRFNEAEKLMAEMP---IDPDEIMWSSVLNAC----RIHKNQELARR 642

Query: 729 CLKNGF----IKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWN 773
                F    ++DA     + ++Y+ +G   N+    +  R    K L +++
Sbjct: 643 AADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYS 694



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 131/572 (22%), Positives = 239/572 (41%), Gaps = 93/572 (16%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y++ G+   A K F     R+   W+  +  Y     + +E  E++ ++   G   
Sbjct: 89  MISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLN-QFKEAFELFVQMQRCGTEP 147

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
                  +L  C          +V   +IK G+D  + +   L++ Y K   ++ A +LF
Sbjct: 148 DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLF 207

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG-- 410
            E+ ++ D + +N +I    ++   E A+ LF EMQ S  K    T   +L  CA +G  
Sbjct: 208 KEMPEI-DSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLD 264

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
               G+QIH +V+K+    N+ V N L+  YS+++ +  A ++FD M + +  S+N +IS
Sbjct: 265 DIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIIS 324

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y        AW                            G ++    L R +Q   F  
Sbjct: 325 GY--------AWD---------------------------GKHKYAFDLFRELQFTAFDR 349

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
                + +L   +     + GR+ H   +    D ++ VG SL+DMY K    + A+ +F
Sbjct: 350 KQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIF 409

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------- 642
            N+ +R+ V W ++IS Y  KG +    ++ N+M +  +  D  ++ SL+          
Sbjct: 410 TNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLS 469

Query: 643 ---------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                                      Y+  G  K+A+     M +     N+V+W ++I
Sbjct: 470 LGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR----NIVSWNAMI 525

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-------KEIHCL 728
           S   QN     +LK F +M    ++P+S +   +L  C   GL++ G        +I+ L
Sbjct: 526 SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKL 585

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
             +    ++ Y +  ++DM  +SG    A ++
Sbjct: 586 DPR----REHYAS--VVDMLCRSGRFNEAEKL 611



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 144/293 (49%), Gaps = 3/293 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H+ +IK   +WN   +  +L+  Y +      A K F     +    ++  +  Y ++ G
Sbjct: 273 HSFVIKTNFVWNVF-VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY-AWDG 330

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           + +   +++ EL       +      +L + +  + + +G ++HA  I    D ++ +  
Sbjct: 331 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN 390

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +L++ Y KC   E A  +F+ ++     + W  +I   ++   +E  ++LF +M+ +S  
Sbjct: 391 SLVDMYAKCGKFEEAEMIFTNLTH-RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVI 449

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A   T   +L+A A + +   GKQ+H +++KS   SN+   + L+ +Y++   ++ A + 
Sbjct: 450 ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQT 509

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           F  M D N+ SWN+MIS+Y   G  +     F +M  S +QPD +++  +LS 
Sbjct: 510 FQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSA 562



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 41/262 (15%)

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           I++ G D D       +  ++KN  L  A+++F+ M ++N V                  
Sbjct: 43  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTV------------------ 84

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                            S N ++SGY   G   EA  +   M    +    VTWT LI G
Sbjct: 85  -----------------STNMMISGYVKSGNLGEARKLFDGM----VERTAVTWTILIGG 123

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             Q   ++E+ + F+QMQ+   +P+  T  +LL  C G  +     ++    +K G+   
Sbjct: 124 YSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSR 183

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             V   L+D Y KS  L  A ++F++       S+N MI G++  G  ++A+ LF E+  
Sbjct: 184 LIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQN 243

Query: 798 TGFQPDAITFTALLAACKNSGL 819
           +G +P   TF A+L  C N GL
Sbjct: 244 SGLKPTEFTFAAVL--CANIGL 263


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 736

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 248/724 (34%), Positives = 388/724 (53%), Gaps = 64/724 (8%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM--YSRNNKLELATRVFDSM 457
            + +L  C  + +    KQIH  ++KS L + L   + LI     S +  L  A  +F S+
Sbjct: 29   LNLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSI 85

Query: 458  --KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG----HFTHG 511
              +  N+  WN++I +++       +  LF++M  S + P+  T+  L         TH 
Sbjct: 86   HHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHE 145

Query: 512  SYQNVLTLLRGMQSLGFRPN-GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
            + Q     L+   +L   P+  +S+  +   V ELR  +   +     LR+ + +     
Sbjct: 146  AKQLHAHALK--LALHLHPHVHTSLIHMYSQVGELRHARLVFDKS--TLRDAVSF----- 196

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            T+L+  YV    + +A+ +FD +  +++V+WN++I+GY   G F  A     +M+E ++ 
Sbjct: 197  TALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVS 256

Query: 631  PD----------------------LVSW-------------NSLVSGYSIWGQSKEALVI 655
            P+                      + SW             N+LV  YS  G+   A  +
Sbjct: 257  PNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKL 316

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
               M++     +V+ W ++I G      Y E+L  F  M +E++ PN  T  ++L  C  
Sbjct: 317  FDGMEDK----DVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACAS 372

Query: 716  LGLLQNGKEIHCLCLKN----GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
            LG L  GK +H    KN    G + +  + T +I MY+K G ++ A +VFR   +++LAS
Sbjct: 373  LGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLAS 432

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            WN MI G A+ G+ + A+ LF E++  GFQPD ITF  +L+AC  +G VE G +YF SM+
Sbjct: 433  WNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMN 492

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             DY I P ++HY CM+DLL ++G  DEA   +  M  +PD  IWG+LL +CRIHG +E+ 
Sbjct: 493  KDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFG 552

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E  + RLF+LEP NS  Y L+ N+ A + RW+DV ++R  +++ G+K V   + I+ID +
Sbjct: 553  EYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGV 612

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKL 1011
            VH F      HP +  I+  L  +   +++ G+VPDT  V  D+DEE K   L  H+EKL
Sbjct: 613  VHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKL 672

Query: 1012 AIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            AI +GL+ TK  + IR++KN RVC +CH+A K +S +  REI  RD  RFHHF++G CSC
Sbjct: 673  AIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSC 732

Query: 1072 NDCW 1075
            ND W
Sbjct: 733  NDRW 736



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 241/527 (45%), Gaps = 35/527 (6%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNF--YGKCRDVESANKLFSEVSDLEDDL-LWNEIIMVK 371
           ++H+ +IK G    +  +  L+ F      RD+  A  LF  +     ++ +WN +I   
Sbjct: 43  QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAH 102

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
                  +++ LF +M  S     S T   + ++CAK  A HE KQ+H + LK AL  + 
Sbjct: 103 SLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHP 162

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V   LI MYS+  +L  A  VFD     +  S+ ++I+ Y   G+VD A  LF+++ + 
Sbjct: 163 HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAK 222

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               D+++WN +++G+   G ++  L     MQ     PN S++  VL A   LR L+ G
Sbjct: 223 ----DVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELG 278

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           +    ++   G   +L +  +L+DMY K   +  A+++FD M++++++ WN++I GYC  
Sbjct: 279 KWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHL 338

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA----LVIIHHMKNSGIYPN 667
            L+  A  +   M  E + P+ V++ +++   +  G           I  ++K +G   N
Sbjct: 339 SLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNN 398

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           V  WTS+I    +      + + F  M    +   +  +S         GL  NG     
Sbjct: 399 VSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMIS---------GLAMNGHAERA 449

Query: 728 LCL-----KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK------TLASWNCMI 776
           L L       GF  D     G++   +++G ++     F  S NK       L  + CMI
Sbjct: 450 LGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYF-SSMNKDYGISPKLQHYGCMI 508

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              A  G   EA +L   +     +PD   + +LL AC+  G VE G
Sbjct: 509 DLLARSGKFDEAKVLMGNM---EMEPDGAIWGSLLNACRIHGQVEFG 552



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 203/483 (42%), Gaps = 75/483 (15%)

Query: 279 LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
           L ++ ++   G+   S     + K C K  A     ++HA  +K       H+  +L++ 
Sbjct: 112 LHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHM 171

Query: 339 YGKC---------------RD----------------VESANKLFSEVSDLEDDLLWNEI 367
           Y +                RD                V+ A +LF E+   +D + WN +
Sbjct: 172 YSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP-AKDVVSWNAM 230

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I   +++ ++E A+  F  MQ +       T+V +L AC  + +   GK I  +V     
Sbjct: 231 IAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGF 290

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
             NL + N L+ MYS+  ++  A ++FD M+D ++  WN+MI  Y  L   + A  LF  
Sbjct: 291 GKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEV 350

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M    + P+ +T+                                     VL A   L  
Sbjct: 351 MLRENVTPNDVTF-----------------------------------LAVLPACASLGA 375

Query: 548 LKYGRESHGYILRN----GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
           L  G+  H YI +N    G   ++ + TS++ MY K  C++ A++VF +M +R++ +WN+
Sbjct: 376 LDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNA 435

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNS 662
           +ISG    G    A  +  +M  E  +PD +++  ++S  +  G  +        M K+ 
Sbjct: 436 MISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDY 495

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           GI P +  +  +I    ++  + E+      M+ E   P+     SLL  C   G ++ G
Sbjct: 496 GISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEME---PDGAIWGSLLNACRIHGQVEFG 552

Query: 723 KEI 725
           + +
Sbjct: 553 EYV 555



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 6/298 (2%)

Query: 213 KHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           +HA+++             +LI  Y+  G    A + F    ++    W++ +  Y    
Sbjct: 179 RHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQ-S 237

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  +E L  +  +    V      +  +L  C  L +  LG  + + +  RGF  ++ L 
Sbjct: 238 GRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLV 297

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KC ++ +A KLF  + D +D +LWN +I        +E A+ LF  M   + 
Sbjct: 298 NALVDMYSKCGEIGTARKLFDGMED-KDVILWNTMIGGYCHLSLYEEALVLFEVMLRENV 356

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLK----SALESNLSVCNCLISMYSRNNKLE 448
                T + +L ACA +GA   GK +H Y+ K    +   +N+S+   +I MY++   +E
Sbjct: 357 TPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVE 416

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +A +VF SM   +L+SWN+MIS     G+ + A  LF +M +   QPD IT+  +LS 
Sbjct: 417 VAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSA 474


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/707 (33%), Positives = 379/707 (53%), Gaps = 80/707 (11%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            + L+WN +      +    +A+KL+  M          T   +L++CAK   F EG+QIH
Sbjct: 39   NQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIH 98

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G+VLK   + +L V   LISMY++N +LE A +VFD     ++ S+ ++I+ Y   GY++
Sbjct: 99   GHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIE 158

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A  +F+++       D+++WN ++SG+   G+Y+  L L + M     +P+ S+++ V+
Sbjct: 159  SAQKMFDEIPIK----DVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVV 214

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A  +   ++ GR+ H +I  +G   +L +  +L+D+Y K   ++ A E+ + + N++++
Sbjct: 215  SACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVI 274

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
            +WN+LI GY    L+                                   KEAL++   M
Sbjct: 275  SWNTLIGGYTHMNLY-----------------------------------KEALLLFQEM 299

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
              SG  PN V                                   TM S+L  C  LG +
Sbjct: 300  LRSGETPNDV-----------------------------------TMLSILPACAHLGAI 324

Query: 720  QNGKEIHCLC---LKNGFIKDA-YVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNC 774
              G+ IH      LK   + +A  + T LIDMY+K G++ +A +V   SA N++L++WN 
Sbjct: 325  DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MI GFA++G    A  +F  + + G +PD ITF  LL+AC +SG+++ G   F SM  DY
Sbjct: 385  MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDY 444

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
            NI P +EHY CM+DLLG +G   EA + I TMP +PD  IW +LL +C+IHG+LE  E  
Sbjct: 445  NITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 504

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV-KSVLVWSWIQIDQIVH 953
            +++L K+EP N  +Y L+ N+ A + +W +V ++R  +++ G+ K V   S I+ID +VH
Sbjct: 505  AKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVH 564

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K   L  H+EKLAI
Sbjct: 565  EFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 624

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
             +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  R
Sbjct: 625  AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 206/457 (45%), Gaps = 68/457 (14%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY---GKCRD------------ 344
           +LK C K   F  G ++H  ++K GFD D+++  +L++ Y   G+  D            
Sbjct: 81  LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140

Query: 345 ----------------VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
                           +ESA K+F E+  ++D + WN +I        ++ A++LF+EM 
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIP-IKDVVSWNAMISGYAETGNYKKALELFKEMM 199

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            ++ K    T+  ++ ACA+ G+   G+Q+H ++      SNL + N LI +YS+  ++E
Sbjct: 200 KTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVE 259

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A  + + + + ++ SWN++I  YT +     A  LF +M  S   P+ +T         
Sbjct: 260 TACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT--------- 310

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                  +L++L     LG    G  + V +            ++  G ++ N       
Sbjct: 311 -------MLSILPACAHLGAIDIGRWIHVYID-----------KKLKGVVVTNASS---- 348

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           + TSL+DMY K   +  A +V D+   NR++  WN++I G+   G    A  + ++M + 
Sbjct: 349 LRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKN 408

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRE 686
            I+PD +++  L+S  S  G       I   M+    I P +  +  +I     +  ++E
Sbjct: 409 GIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKE 468

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           + +    M  E   P+     SLL+ C   G L+ G+
Sbjct: 469 AEEMINTMPME---PDGVIWCSLLKACKIHGNLELGE 502



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 145/280 (51%), Gaps = 7/280 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y   G   SA K F     +    W++ +  Y    G  ++ LE++ E+    V 
Sbjct: 146 ALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAE-TGNYKKALELFKEMMKTNVK 204

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  ++  C +  +  LG +VH+ +   GF  ++ +  AL++ Y KC +VE+A +L
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
              +S+ +D + WN +I        ++ A+ LF+EM  S       T++ +L ACA +GA
Sbjct: 265 LEGLSN-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 323

Query: 412 FHEGKQIHGYV---LKSALESNL-SVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWN 466
              G+ IH Y+   LK  + +N  S+   LI MY++   ++ A +V DS   + +LS+WN
Sbjct: 324 IDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWN 383

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +MI  +   G  + A+ +F++M  + I+PD IT+  LLS 
Sbjct: 384 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 423


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/618 (36%), Positives = 350/618 (56%), Gaps = 12/618 (1%)

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            +DH +S   +++  Y    + ++ ++L  K+      P++  +N ++ G   +      +
Sbjct: 60   QDHYVSG--TLVKCYANPHFSNLNFAL--KVFEYVPNPNVFVFNIIIKGCLQNNEPCKAI 115

Query: 518  TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
                 M     RPN  +   + +A T     + G + H ++++ GL  D+++ ++ + MY
Sbjct: 116  CCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMY 175

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
                 ++ A+ +     N +++ +N++I GY   G    AK++   ME++ +     SWN
Sbjct: 176  GSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVG----SWN 231

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
             +VSG +  G  +EA  + + MK      N ++W+++I G ++   Y+E+L+ F  MQ+E
Sbjct: 232  VMVSGMAKCGMIEEARELFNEMKEK----NEISWSAMIDGYIKGGYYKEALEVFNVMQRE 287

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            +I+P    +SS+L  C  LG L  G+ IH     N    DA + T L+DMY+K G L  A
Sbjct: 288  EIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMA 347

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             +VF K   K + +WN MI G  ++G  ++AI LF ++ +  F+P+ IT   +L+AC +S
Sbjct: 348  WDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHS 407

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            G+V+EG + F+SM   Y I P +EHY C+VDLLG+AG L EA + + +MP +P A +WGA
Sbjct: 408  GMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGA 467

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+CR HG +E  E   + L +LEP NS  Y L+ N+ A + RW+DV  +R  M E GV
Sbjct: 468  LLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGV 527

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            K+    S I  D +VH F      HP    IY  L +++  +K  G+ P+T  V  DI+E
Sbjct: 528  KTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEE 587

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            EEK   L  H+EKLAI +GL+ TK    I V+KN R+C DCH+A K +S V  REI +RD
Sbjct: 588  EEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRD 647

Query: 1058 GARFHHFREGECSCNDCW 1075
             AR+HHF+ G CSC D W
Sbjct: 648  RARYHHFKTGTCSCKDFW 665



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 226/491 (46%), Gaps = 46/491 (9%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCR--DVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           +VHA  ++ G   D ++   L+  Y      ++  A K+F  V +  +  ++N II   L
Sbjct: 48  QVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPN-PNVFVFNIIIKGCL 106

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +N +   AI  + +M  + A+    T   + +AC    A  EG Q+H +V+K  L  ++ 
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVH 166

Query: 433 ------------------------------VC-NCLISMYSRNNKLELATRVFDSMKDHN 461
                                         +C N +I  Y +  ++E A  +F SM+D N
Sbjct: 167 IRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKN 226

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           + SWN M+S     G ++ A  LFN+M     + + I+W+ ++ G+   G Y+  L +  
Sbjct: 227 VGSWNVMVSGMAKCGMIEEARELFNEMK----EKNEISWSAMIDGYIKGGYYKEALEVFN 282

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            MQ    RP    +S VL A   L  L  GR  H Y+  N   +D  +GT+L+DMY K  
Sbjct: 283 VMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCG 342

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            L  A +VF+ M+ + +  WN++I G    G   +A ++  +M++++ +P+ ++   ++S
Sbjct: 343 RLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLS 402

Query: 642 GYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             +  G   E L I + M+   GI P +  +  ++    +     E+ +    M  E   
Sbjct: 403 ACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPME--- 459

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSA 757
           P++    +LL  C   G ++ G+ +  + L+         A  L ++Y+++G   ++ + 
Sbjct: 460 PSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYAL-LSNIYARAGRWDDVANV 518

Query: 758 REVFRKSANKT 768
           R++ ++   KT
Sbjct: 519 RKLMKERGVKT 529



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 131/316 (41%), Gaps = 62/316 (19%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC-------------------------- 333
           + K CT   A   GV+VHA +IK+G   DVH++                           
Sbjct: 136 LFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSD 195

Query: 334 -----ALMNFYGKCRDVESANKLFSEVSDL------------------------------ 358
                A+++ Y KC +VE+A +LF  + D                               
Sbjct: 196 VICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKE 255

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
           ++++ W+ +I   ++   ++ A+++F  MQ    +     +  +L ACA +GA  +G+ I
Sbjct: 256 KNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWI 315

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H YV  ++   +  +   L+ MY++  +L++A  VF+ M+   + +WN+MI      G  
Sbjct: 316 HAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRA 375

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSV 537
           + A  LF KM   + +P+ IT   +LS     G     L +   M+ + G  P       
Sbjct: 376 EDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGC 435

Query: 538 VLQAVTELRLLKYGRE 553
           V+  +    LL    E
Sbjct: 436 VVDLLGRAGLLGEAEE 451



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 34/276 (12%)

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
           L ++++    KF  Q+ Q+ I     T SS          L + K++H + L+ G  +D 
Sbjct: 11  LASKDFSTENKFTSQLSQKTILDLLNTKSSTS--------LHHLKQVHAVALRTGHFQDH 62

Query: 739 YVATGLIDMYSKS--GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
           YV+  L+  Y+     NL  A +VF    N  +  +N +I G        +AI  +++++
Sbjct: 63  YVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMM 122

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEGWKYF-----DSMSTDYNIIPT-IEHYSCMVDLL 850
               +P+  T+  L  AC  +   EEG +         +S D +I    I+ Y    ++ 
Sbjct: 123 IAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVE 182

Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI-ASRRLF-KLEPCNSAN 908
           G    L E  +         D   + A+     I G+L+  E+ A++ LF  +E  N  +
Sbjct: 183 GARRMLGEDGN--------SDVICFNAM-----IDGYLKCGEVEAAKELFWSMEDKNVGS 229

Query: 909 YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
           +N+M++ +A     E+   L + M E   K+ + WS
Sbjct: 230 WNVMVSGMAKCGMIEEARELFNEMKE---KNEISWS 262


>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 827

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 248/849 (29%), Positives = 427/849 (50%), Gaps = 80/849 (9%)

Query: 164 PNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKI 223
           P ++   P     PP  +L     L+  +     L  +N    L+  K  H+  IK G  
Sbjct: 8   PLTLPPLPKHQTKPPNFSLLHTPPLTSTTYS-TILQSSNS---LTLGKQLHSHSIKTG-F 62

Query: 224 WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
           +N + +   L+  Y     F  A   F     ++   W++ L  + + G   +  + ++ 
Sbjct: 63  YNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFM-LFE 121

Query: 284 EL--HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
           E    G G      +  ++L +C  L    LG +VH  ++K GF  +V++  AL++ YGK
Sbjct: 122 EFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGK 181

Query: 342 CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN-------EKWEN--------------- 379
           C  ++ A K+   ++  +D + WN II   + N       +  EN               
Sbjct: 182 CGSLDEAKKVLEGMTQ-KDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSA 240

Query: 380 -------------AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
                        +++LF  M  +     +RT+  +L AC+++     GK++HGY+++  
Sbjct: 241 VIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHE 300

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
           L SN  V N L+ MY R   ++ A ++F        +S+N+MI  Y   G V  A  LF 
Sbjct: 301 LFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFY 360

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
           +M    ++ D I+WNC++SGH  +  + + L L R +   G  P+  ++  +L    ++ 
Sbjct: 361 QMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMT 420

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            ++ G+E H   +  GL  + +VG +L++MY K + +  AQ  FD +  R          
Sbjct: 421 CIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISER---------- 470

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                                    D  +WN+L+SGY+   Q  +   ++  MK+ G  P
Sbjct: 471 -------------------------DTSTWNALISGYARCNQIGKIRELVERMKSDGFEP 505

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           NV TW S+++G ++N+ Y  +++ F +MQ   ++P+  T+  +L  C  L  +  GK++H
Sbjct: 506 NVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVH 565

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
              ++ G+  DA++   L+DMY+K G++K   +V+ K +N  L   N M+  +A++G+G+
Sbjct: 566 AYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGE 625

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
           E I++F  +L++  +PD +TF ++L++C ++G ++ G++ F  M T YNI PT++HY+CM
Sbjct: 626 EGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPTLKHYTCM 684

Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
           VDLL +AG LDEA+  I+ MP + D+  W ALLG C IH  +   EIA+ +L +LEP N+
Sbjct: 685 VDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNT 744

Query: 907 ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            NY L+ NL A + RW D+ + R  M++ G++     SWI+    VH+F A    H    
Sbjct: 745 GNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVE 804

Query: 967 EIYFELYHL 975
           EIYF L +L
Sbjct: 805 EIYFMLDNL 813


>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/586 (38%), Positives = 324/586 (55%), Gaps = 48/586 (8%)

Query: 500  WNCLLSGHF-----THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            WN L+  H        G   + +++   M+  G +P+  +   +LQ+     LL  GR  
Sbjct: 27   WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H  ILR GL  D +V TSL+ MY     L  A++VFD +                     
Sbjct: 87   HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIP-------------------- 126

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                           +PDL SWNS+++     G    A  +   M       NV++W+ +
Sbjct: 127  ---------------QPDLPSWNSIINANFQAGLVDMARNLFAVMPER----NVISWSCM 167

Query: 675  ISGSLQNENYRESLKFFIQMQQ---EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            I+G ++   Y+E+L  F +MQ     D++PN  TMS +L  CG LG L++GK  H    K
Sbjct: 168  INGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDK 227

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAIL 790
             G   D  + T LIDMY+K G+++ A  VF     NK + +W+ MI G A++G  +E + 
Sbjct: 228  CGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVG 287

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF +++  G +P+A+TF A+  AC + GLV EG  Y   M+ DY+IIPTI+HY CMVDL 
Sbjct: 288  LFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLY 347

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG + EAW+ +++MP +PD  +WGALL   R+HG +E  E+A ++L +LEP NS  Y 
Sbjct: 348  GRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYV 407

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A   RWEDV  +R  M+ +G+K V   S I++  ++H F      HP T +I+ 
Sbjct: 408  LLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHM 467

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  ++  +K  GYV +T+ V  D+DEE K   L  H+EKLA+ YG +KT    PIR++K
Sbjct: 468  MLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVK 527

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCWQ 1076
            N R+C DCH A K +S V  REI +RD  RFHHF +G CSC D W+
Sbjct: 528  NLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYWE 573



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 187/387 (48%), Gaps = 55/387 (14%)

Query: 360 DDLLWNEIIMVKLRNEKWENA-----IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           +  LWN +I   ++            I +F  M+F   +    T   +LQ+ A     H 
Sbjct: 23  ESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHL 82

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+ +H  +L+  L  +  V   LISMYS    L  A +VFD +   +L SWNS+I++   
Sbjct: 83  GRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQ 142

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG---FRPN 531
            G VD+A +LF  M     + ++I+W+C+++G+   G Y+  L L R MQ LG    RPN
Sbjct: 143 AGLVDMARNLFAVMP----ERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPN 198

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             ++S VL A   L  L++G+ +H YI + G+  D+ +GT+L+DMY K   ++ A  VF 
Sbjct: 199 EFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFS 258

Query: 592 NM-KNRNIVAWNSLISGYCFKGLFVNA----KKMLNQ----------------------- 623
           N+  N++++AW+++ISG    GL         KM+NQ                       
Sbjct: 259 NLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVS 318

Query: 624 ---------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                     E+  I P +  +  +V  Y   G+ KEA  ++  M    + P+V+ W +L
Sbjct: 319 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP---MEPDVLVWGAL 375

Query: 675 ISGSLQN---ENYRESLKFFIQMQQED 698
           +SGS  +   E    +LK  I+++  +
Sbjct: 376 LSGSRMHGDIETCELALKKLIELEPTN 402



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 146/356 (41%), Gaps = 77/356 (21%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS--------------- 356
           LG  VHA +++ G   D  ++ +L++ Y  C ++  A ++F E+                
Sbjct: 82  LGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANF 141

Query: 357 -----DLEDDLL----------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR---T 398
                D+  +L           W+ +I   +R  +++ A+ LFREMQ      +     T
Sbjct: 142 QAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFT 201

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM- 457
           +  +L AC ++GA   GK  H Y+ K  +  ++ +   LI MY++   +E AT VF ++ 
Sbjct: 202 MSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLG 261

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            + ++ +W++MIS     G  +    LF+KM +                           
Sbjct: 262 PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQ-------------------------- 295

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS----L 573
                    G RPN  +   V  A     L+  G++   Y+ R   DY +         +
Sbjct: 296 ---------GVRPNAVTFLAVFCACVHGGLVSEGKD---YLRRMTEDYSIIPTIQHYGCM 343

Query: 574 MDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           +D+Y +   ++ A  V  +M    +++ W +L+SG    G     +  L ++ E E
Sbjct: 344 VDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELE 399



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 159/407 (39%), Gaps = 57/407 (14%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGV- 290
           S+I    + G    A   F +   R+   WS  +  Y    G+ +E L ++ E+   GV 
Sbjct: 135 SIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVR-CGQYKEALALFREMQMLGVN 193

Query: 291 IFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
             R    T+  +L  C +L A   G   HA + K G   DV L  AL++ Y KC  VE A
Sbjct: 194 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKA 253

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +FS +   +D + W+ +I     +   E  + LF +M     +  + T + +  AC  
Sbjct: 254 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVH 313

Query: 409 VGAFHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            G   EGK  +       ++   +    C++ +Y R  +++ A  V  SM          
Sbjct: 314 GGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP--------- 364

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
                                    ++PD++ W  LLSG   HG  +     L+ +  L 
Sbjct: 365 -------------------------MEPDVLVWGALLSGSRMHGDIETCELALKKLIEL- 398

Query: 528 FRPNGSSVSVVLQAV-------TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             P  S   V+L  V        ++R ++   E+ G     G    + VG  L + +V +
Sbjct: 399 -EPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSL-IEVGGVLHEFFVGD 456

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           D     +++   ++         ++     +G   N K++L  ++EE
Sbjct: 457 DSHPETRQIHMMLEE--------ILERLKVEGYVGNTKEVLLDLDEE 495


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g56690,
            mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/711 (33%), Positives = 378/711 (53%), Gaps = 59/711 (8%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            K++   + ++ L S    C+  IS  SR  K+  A + FDS++   + SWNS++S Y   
Sbjct: 2    KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSN 61

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH------------FTHGSYQNVLT---LL 520
            G    A  LF++M+    + ++++WN L+SG+            F     +NV++   ++
Sbjct: 62   GLPKEARQLFDEMS----ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMV 117

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELR-------LLKYGRESHGYILRNGLDY-DLYVGTS 572
            +G    G      S+   +    E+        L+  GR      L + +   D+   T+
Sbjct: 118  KGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN 177

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            ++    +   +  A+ +FD M+ RN+V W ++I+GY        A+K+   M E+     
Sbjct: 178  MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----T 233

Query: 633  LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP-------------------------- 666
             VSW S++ GY++ G+ ++A      M    +                            
Sbjct: 234  EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMED 293

Query: 667  -NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             +  TW  +I    +     E+L  F QMQ++ ++P+  ++ S+L  C  L  LQ G+++
Sbjct: 294  RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            H   ++  F  D YVA+ L+ MY K G L  A+ VF + ++K +  WN +I G+A +G G
Sbjct: 354  HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            +EA+ +FHE+  +G  P+ +T  A+L AC  +G +EEG + F+SM + + + PT+EHYSC
Sbjct: 414  EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
             VD+LG+AG +D+A + I +M  KPDAT+WGALLG+C+ H  L+ AE+A+++LF+ EP N
Sbjct: 474  TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP-HPA 964
            +  Y L+ ++ A  ++W DV  +R +M    V      SWI++ + VH+F+  G   HP 
Sbjct: 534  AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
               I   L      +++ GY PD   V  D+DEEEK   L  H+E+LA+ YGL+K     
Sbjct: 594  QAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGV 653

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            PIRV+KN RVC DCH A K +S V  REI LRD  RFHHF  GECSC D W
Sbjct: 654  PIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 17/302 (5%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  + E G+ + A + F L   R  A W   ++ YE  G E+ E L+++ ++  +GV 
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL-EALDLFAQMQKQGVR 328

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  IL +C  L +   G +VHA L++  FD DV++   LM  Y KC ++  A  +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F   S  +D ++WN II     +   E A+K+F EM  S       T++ +L AC+  G 
Sbjct: 389 FDRFSS-KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447

Query: 412 FHEGKQIHGYVLKSALESNLSVC------NCLISMYSRNNKLELATRVFDSMK-DHNLSS 464
             EG +I       ++ES   V       +C + M  R  +++ A  + +SM    + + 
Sbjct: 448 LEEGLEIF-----ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV 502

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTHGSYQNVLTLLRGM 523
           W +++ +      +D+A     K+  +  +PD      LLS  + +   + +V  + + M
Sbjct: 503 WGALLGACKTHSRLDLAEVAAKKLFEN--EPDNAGTYVLLSSINASRSKWGDVAVVRKNM 560

Query: 524 QS 525
           ++
Sbjct: 561 RT 562


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/776 (32%), Positives = 394/776 (50%), Gaps = 70/776 (9%)

Query: 329  VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
            V L  AL++ + +  ++  A  +F ++S+  D   WN ++    +   ++ A+ L+  M 
Sbjct: 132  VRLGNALLSMFVRFGNLLDAWYVFGKMSE-RDVFSWNVLVGGYAKAGCFDEALNLYHRML 190

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            ++  +    T   +L+ CA V     GK+IH +V++   ES++ V N LI+MY +   + 
Sbjct: 191  WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A  +FD M   +  SWN+MIS Y   G       LF+ M    + PD+IT         
Sbjct: 251  NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLIT--------- 301

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                                      ++ V  A   L   + GR  HGY++++    D+ 
Sbjct: 302  --------------------------MTTVASACELLDNERLGRGVHGYVVKSEFGGDIS 335

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            +  SL+ MY     L+ A+ VF  M+++++V+W ++I+      L   A +    ME E 
Sbjct: 336  MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEG 395

Query: 629  IKPDLVSWNSLVSGYSIWGQ-----------SKEALVIIHHMKNSGI------------- 664
            I PD ++  S++S  +  G             K  LV    + NS I             
Sbjct: 396  ILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNAL 455

Query: 665  -------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
                     NVV+WTSLI G   N    E+L FF QM +E +KPNS T+ S+L  C  +G
Sbjct: 456  EVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIG 514

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             L  GKEIH   L+ G   D ++   ++DMY + G    A   F  S  K + +WN ++ 
Sbjct: 515  ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAWNILLT 573

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            G+A  G  K A+ LF ++LE    PD ITF +LL AC  SG+V EG +YF+ M   YN+ 
Sbjct: 574  GYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT 633

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P ++HY+C+VD+LG+AG LD+A+DFI+ MP +PDA IWGALL +CRIH ++E  EIA++R
Sbjct: 634  PNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKR 693

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            +F+ +  +   Y L+ NL A    W+ V ++R  M E G+ +    SW++I   VH F +
Sbjct: 694  VFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLS 753

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
                H  + EI   L    S+MK+ G+  + +  +    E  +  +   H+E+ AI +GL
Sbjct: 754  GDNSHSQSKEINGVLDGFCSKMKENGF-GNLKSSFTSEIESSRADIFCGHSERQAIAFGL 812

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            + T    PI V KN  +C  CH   K++S +  REI +RD   +HHF++G CSC D
Sbjct: 813  INTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGD 868



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 154/595 (25%), Positives = 242/595 (40%), Gaps = 90/595 (15%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELLE--VWGELHG 287
           +L+  ++ FG+   A   F     R    W+  +  Y   G   E   L    +W E+  
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRP 196

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
               F S     +LK C  +     G E+HA +I+ GF+ DV +  AL+  Y KC D+ +
Sbjct: 197 NVYTFPS-----VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  LF ++    D + WN +I     N      ++LF  M+  S      T+  +  AC 
Sbjct: 252 ARMLFDKMPK-RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE 310

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +     G+ +HGYV+KS    ++S+ N LI MYS   +LE A  VF  M+  ++ SW +
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTA 370

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           MI+S         A   +  M    I PD IT   L+S                      
Sbjct: 371 MIASLVSHKLPFKAVETYKMMELEGILPDEIT---LVS---------------------- 405

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
                     VL A   +  L  G   H   ++ GL   + V  SL+DMY K  C+ NA 
Sbjct: 406 ----------VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNAL 455

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
           EVF N+  +N+V+W SLI G         A     QM +E +KP+ V+  S++S  +  G
Sbjct: 456 EVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIG 514

Query: 648 QSKEALVIIHHMKNSGI-----YPN-------------------------VVTWTSLISG 677
                  I  H   +G+      PN                         V  W  L++G
Sbjct: 515 ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNILLTG 574

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             Q    + +++ F +M + +I P+  T  SLL  C   G++  G E          +K+
Sbjct: 575 YAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYF------NIMKN 628

Query: 738 AYVATG-------LIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN 784
            Y  T        ++D+  ++G L  A +  +    +  A+ W  ++    I+ N
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRN 683



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 233/505 (46%), Gaps = 46/505 (9%)

Query: 211 KSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  HA +I+ G  + SD D+  +LI  Y++ GD ++A   F     R    W++ +  Y 
Sbjct: 218 KEIHAHVIRFG--FESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYF 275

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
             GG + E LE++  +    V      +T +   C  L    LG  VH  ++K  F  D+
Sbjct: 276 ENGGGL-EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDI 334

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  +L+  Y     +E A  +FS +   +D + W  +I   + ++    A++ ++ M+ 
Sbjct: 335 SMNNSLIQMYSSLGRLEEAETVFSRMES-KDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                   T+V +L ACA +G    G ++H   +K+ L S++ V N LI MYS+   ++ 
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  VF ++   N+ SW S+I                                  L     
Sbjct: 454 ALEVFRNISGKNVVSWTSLI----------------------------------LGLRIN 479

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           + S++ +L   +  +S+  +PN  ++  VL A   +  L  G+E H + LR G+ +D ++
Sbjct: 480 NRSFEALLFFRQMKESM--KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFL 537

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             +++DMYV+      A   F++ K +++ AWN L++GY  +G    A ++ ++M E EI
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
            PD +++ SL+   S  G   E L   + MKN   + PN+  +  ++    +     ++ 
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
            F   +Q   I+P++    +LL  C
Sbjct: 657 DF---IQDMPIRPDAAIWGALLNAC 678



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 25/287 (8%)

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH--------CLCLKNGF 734
           N  +++K    M +  I+       +LL+ C        G  ++        CLC++ G 
Sbjct: 77  NLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG- 135

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                    L+ M+ + GNL  A  VF K + + + SWN ++ G+A  G   EA+ L+H 
Sbjct: 136 -------NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHR 188

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
           +L    +P+  TF ++L  C     +  G K   +    +     ++  + ++ +  K G
Sbjct: 189 MLWAEIRPNVYTFPSVLKTCAGVSDIARG-KEIHAHVIRFGFESDVDVGNALITMYVKCG 247

Query: 855 YLDEAWDFIRTMPFKPDATIWGALL-GSCRIHGHLEYAEIAS-RRLFKLEPCNSANYNLM 912
            +  A      MP K D   W A++ G     G LE  E+ S  R   ++P       + 
Sbjct: 248 DISNARMLFDKMP-KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDP-----DLIT 301

Query: 913 MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
           M  +A +    D ERL   +    VKS         + ++ ++S+ G
Sbjct: 302 MTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLG 348


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/776 (32%), Positives = 394/776 (50%), Gaps = 70/776 (9%)

Query: 329  VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
            V L  AL++ + +  ++  A  +F ++S+  D   WN ++    +   ++ A+ L+  M 
Sbjct: 132  VRLGNALLSMFVRFGNLLDAWYVFGKMSE-RDVFSWNVLVGGYAKAGCFDEALNLYHRML 190

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            ++  +    T   +L+ CA V     GK+IH +V++   ES++ V N LI+MY +   + 
Sbjct: 191  WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A  +FD M   +  SWN+MIS Y   G       LF+ M    + PD+IT         
Sbjct: 251  NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLIT--------- 301

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                                      ++ V  A   L   + GR  HGY++++    D+ 
Sbjct: 302  --------------------------MTTVASACELLDNERLGRGVHGYVVKSEFGGDIS 335

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            +  SL+ MY     L+ A+ VF  M+++++V+W ++I+      L   A +    ME E 
Sbjct: 336  MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEG 395

Query: 629  IKPDLVSWNSLVSGYSIWGQ-----------SKEALVIIHHMKNSGI------------- 664
            I PD ++  S++S  +  G             K  LV    + NS I             
Sbjct: 396  ILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNAL 455

Query: 665  -------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
                     NVV+WTSLI G   N    E+L FF QM +E +KPNS T+ S+L  C  +G
Sbjct: 456  EVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIG 514

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             L  GKEIH   L+ G   D ++   ++DMY + G    A   F  S  K + +WN ++ 
Sbjct: 515  ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAWNILLT 573

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            G+A  G  K A+ LF ++LE    PD ITF +LL AC  SG+V EG +YF+ M   YN+ 
Sbjct: 574  GYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT 633

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P ++HY+C+VD+LG+AG LD+A+DFI+ MP +PDA IWGALL +CRIH ++E  EIA++R
Sbjct: 634  PNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKR 693

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            +F+ +  +   Y L+ NL A    W+ V ++R  M E G+ +    SW++I   VH F +
Sbjct: 694  VFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLS 753

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
                H  + EI   L    S+MK+ G+  + +  +    E  +  +   H+E+ AI +GL
Sbjct: 754  GDNSHSQSKEINGVLDGFCSKMKENGF-GNLKSSFTSEIESSRADIFCGHSERQAIAFGL 812

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            + T    PI V KN  +C  CH   K++S +  REI +RD   +HHF++G CSC D
Sbjct: 813  INTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGD 868



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 154/595 (25%), Positives = 242/595 (40%), Gaps = 90/595 (15%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELLE--VWGELHG 287
           +L+  ++ FG+   A   F     R    W+  +  Y   G   E   L    +W E+  
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRP 196

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
               F S     +LK C  +     G E+HA +I+ GF+ DV +  AL+  Y KC D+ +
Sbjct: 197 NVYTFPS-----VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  LF ++    D + WN +I     N      ++LF  M+  S      T+  +  AC 
Sbjct: 252 ARMLFDKMPK-RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE 310

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +     G+ +HGYV+KS    ++S+ N LI MYS   +LE A  VF  M+  ++ SW +
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTA 370

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           MI+S         A   +  M    I PD IT   L+S                      
Sbjct: 371 MIASLVSHKLPFKAVETYKMMELEGILPDEIT---LVS---------------------- 405

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
                     VL A   +  L  G   H   ++ GL   + V  SL+DMY K  C+ NA 
Sbjct: 406 ----------VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNAL 455

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
           EVF N+  +N+V+W SLI G         A     QM +E +KP+ V+  S++S  +  G
Sbjct: 456 EVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIG 514

Query: 648 QSKEALVIIHHMKNSGI-----YPN-------------------------VVTWTSLISG 677
                  I  H   +G+      PN                         V  W  L++G
Sbjct: 515 ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNILLTG 574

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             Q    + +++ F +M + +I P+  T  SLL  C   G++  G E          +K+
Sbjct: 575 YAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYF------NIMKN 628

Query: 738 AYVATG-------LIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN 784
            Y  T        ++D+  ++G L  A +  +    +  A+ W  ++    I+ N
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRN 683



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 233/505 (46%), Gaps = 46/505 (9%)

Query: 211 KSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  HA +I+ G  + SD D+  +LI  Y++ GD ++A   F     R    W++ +  Y 
Sbjct: 218 KEIHAHVIRFG--FESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYF 275

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
             GG + E LE++  +    V      +T +   C  L    LG  VH  ++K  F  D+
Sbjct: 276 ENGGGL-EGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDI 334

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  +L+  Y     +E A  +FS +   +D + W  +I   + ++    A++ ++ M+ 
Sbjct: 335 SMNNSLIQMYSSLGRLEEAETVFSRMES-KDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                   T+V +L ACA +G    G ++H   +K+ L S++ V N LI MYS+   ++ 
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  VF ++   N+ SW S+I                                  L     
Sbjct: 454 ALEVFRNISGKNVVSWTSLI----------------------------------LGLRIN 479

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           + S++ +L   +  +S+  +PN  ++  VL A   +  L  G+E H + LR G+ +D ++
Sbjct: 480 NRSFEALLFFRQMKESM--KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFL 537

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             +++DMYV+      A   F++ K +++ AWN L++GY  +G    A ++ ++M E EI
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
            PD +++ SL+   S  G   E L   + MKN   + PN+  +  ++    +     ++ 
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
            F   +Q   I+P++    +LL  C
Sbjct: 657 DF---IQDMPIRPDAAIWGALLNAC 678



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 25/287 (8%)

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH--------CLCLKNGF 734
           N  +++K    M +  I+       +LL+ C        G  ++        CLC++ G 
Sbjct: 77  NLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG- 135

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                    L+ M+ + GNL  A  VF K + + + SWN ++ G+A  G   EA+ L+H 
Sbjct: 136 -------NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHR 188

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
           +L    +P+  TF ++L  C     +  G K   +    +     ++  + ++ +  K G
Sbjct: 189 MLWAEIRPNVYTFPSVLKTCAGVSDIARG-KEIHAHVIRFGFESDVDVGNALITMYVKCG 247

Query: 855 YLDEAWDFIRTMPFKPDATIWGALL-GSCRIHGHLEYAEIAS-RRLFKLEPCNSANYNLM 912
            +  A      MP K D   W A++ G     G LE  E+ S  R   ++P       + 
Sbjct: 248 DISNARMLFDKMP-KRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDP-----DLIT 301

Query: 913 MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
           M  +A +    D ERL   +    VKS         + ++ ++S+ G
Sbjct: 302 MTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLG 348


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 281/921 (30%), Positives = 445/921 (48%), Gaps = 92/921 (9%)

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
            L+  +  H Q++K G   N D +   L+  Y +      A  AF    SR  A W++ + 
Sbjct: 40   LAQGRQLHRQIVKQGLARN-DLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIA 98

Query: 267  DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT------------KLMAFWLGV 314
               S          +  E   +    R   LTII  L              +  +     
Sbjct: 99   AQSSPAAVFDLYTRMKLEERAEN---RPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQAR 155

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
             VH  +     + D+ +  AL++ YGKC  VESA ++FS +  + D + WN  IM    N
Sbjct: 156  IVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQ-VPDLICWNAAIMACAGN 214

Query: 375  -EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
             E+ + A+ L R M          + V +L +C    +    + IH  V +     ++ V
Sbjct: 215  DERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVV 274

Query: 434  CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
               L++MY R   ++ +  VF++M   N  SWN+MI+++   G+   A++++        
Sbjct: 275  ATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIY-------- 326

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
                  W                      MQ  GFRPN  +    L+A         G  
Sbjct: 327  ------WR---------------------MQQEGFRPNKITFVTALKAACSSSSQDLGES 359

Query: 554  S--HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            +  HG+I   GL+ D+ VGT+L+ MY     +  A+  FD +  +NIV+WN++++ Y   
Sbjct: 360  AALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDN 419

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSW----------------NSLVSGYSIWGQ-SKEALV 654
            G    A ++   M+ + + P+ VS+                ++ V G  ++ Q S  A  
Sbjct: 420  GRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANG 479

Query: 655  IIHHMKNSG------------IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
            ++     SG            +  + V+W + ++     E+   ++  F  MQ E  +P+
Sbjct: 480  VVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPD 539

Query: 703  STTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYSKSG-NLKSAREV 760
              T+ S++  C  LG L+ G+ I   L       +D  VA+ +++M +K G ++     +
Sbjct: 540  KFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERL 599

Query: 761  FRKSAN--KTLASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNS 817
            F +  +  K L +WN MI  +A +G+G++A+ LF  + + +  +PD+ TF ++L+ C ++
Sbjct: 600  FARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHA 659

Query: 818  GLVEEGWKYFDSMSTDYNI-IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            GLVE+G   F        I    +EHY+C+VD+LG+ GYL EA DFIR MP   D+ +W 
Sbjct: 660  GLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWT 719

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            +LLG+C  +G LE  E A+R   +L   +S  Y ++ N+ A + RWED  R+R  M E  
Sbjct: 720  SLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERR 779

Query: 937  VKS-VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            VK  V   S I +   VH F A    HP +  IY EL  L   +++ GYVPDTR V  D+
Sbjct: 780  VKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDV 839

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            +EE+K ++L  H+EKLAI +GL+    R  IRVIKN RVC DCHTA K+++ V  REI +
Sbjct: 840  EEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAV 899

Query: 1056 RDGARFHHF-REGECSCNDCW 1075
            RD  RFHHF ++GECSC D W
Sbjct: 900  RDCNRFHHFGKDGECSCGDYW 920



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/458 (22%), Positives = 198/458 (43%), Gaps = 69/458 (15%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+  +L+ C       +G+Q+H  ++K  L  N  + N L+ MYS+   L+ A   F ++
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-SSRIQPDIITWNCLLSGHFTHGSYQNV 516
           +   +++WN++I++ +    V   + L+ +M    R +                 +  N 
Sbjct: 86  RSRGIATWNTLIAAQSSPAAV---FDLYTRMKLEERAE-----------------NRPNK 125

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           LT++  + ++      SS S    ++ + R++      H  I  + L+ DL+V T+L+D 
Sbjct: 126 LTIIAVLGAIASGDPSSSSSSRAPSIAQARIV------HDDIRGSDLERDLFVATALLDA 179

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNS-----------------LISGYCFKGLFVN--- 616
           Y K  C+++A EVF  ++  +++ WN+                 L+     +GL  N   
Sbjct: 180 YGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRAS 239

Query: 617 ----------------AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
                           A+ +  ++EE     D+V   +LV+ Y   G   E++ +   M 
Sbjct: 240 FVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA 299

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT-MSSLLQTCGGLGL- 718
                 N V+W ++I+   Q  +   +   + +MQQE  +PN  T +++L   C      
Sbjct: 300 ----VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQD 355

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L     +H      G   D  V T L+ MY  +G +  AR  F     K + SWN M+  
Sbjct: 356 LGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTA 415

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           +   G  +EA+ LF  +      P+ +++ A+L  C++
Sbjct: 416 YGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED 453



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 24/194 (12%)

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T++ LL+ C G   L  G+++H   +K G  ++  +   L+ MYSK  +L  A   F   
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 765 ANKTLASWNCMIMG-------FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            ++ +A+WN +I         F +Y   K       E  E   +P+ +T  A+L A  + 
Sbjct: 86  RSRGIATWNTLIAAQSSPAAVFDLYTRMK-----LEERAEN--RPNKLTIIAVLGAIASG 138

Query: 818 GLVEEGWKYFDSMSTDYNIIPTIEH---------YSCMVDLLGKAGYLDEAWDFIRTMPF 868
                      S++    +   I            + ++D  GK G ++ A +    +  
Sbjct: 139 DPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV 198

Query: 869 KPDATIWGALLGSC 882
            PD   W A + +C
Sbjct: 199 -PDLICWNAAIMAC 211


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 252/842 (29%), Positives = 404/842 (47%), Gaps = 122/842 (14%)

Query: 296  ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
            I   IL+ C KL    LG +VHA L+  G D    L   L+  Y +   VE A ++F ++
Sbjct: 91   IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 150

Query: 356  SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            S+  +   W  I+ +      +E  IKLF  M     +       K+ +AC+++  +  G
Sbjct: 151  SE-RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            K ++ Y+L    E N  V   ++ M+ +  ++++A R F+ ++  ++  WN M+S YT  
Sbjct: 210  KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 269

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV------------------- 516
            G    A    + M  S ++PD +TWN ++SG+   G ++                     
Sbjct: 270  GEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVS 329

Query: 517  -----------------LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
                             L++ R M   G +PN  +++  + A T L LL++GRE HGY +
Sbjct: 330  WTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 389

Query: 560  R-NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN--------------------- 597
            +   LD DL VG SL+D Y K   ++ A+  F  +K  +                     
Sbjct: 390  KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAI 449

Query: 598  --------------IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
                          I+ WN L++G+   G    A +   +M    + P+  + +  ++  
Sbjct: 450  ELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAAC 509

Query: 644  S-----IWGQSKEALVIIHHMK-NSGI-------------------------YPNVVTWT 672
                    G+     V+ +H++ ++G+                           +VV W 
Sbjct: 510  GQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            S+IS   Q+     +L    +M   +++ N+ TM S L  C  L  L+ GKEIH   ++ 
Sbjct: 570  SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G     ++   LIDMY + G+++ +R +F     + L SWN MI  + ++G G +A+ LF
Sbjct: 630  GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
                  G +P+ ITFT LL+AC +SGL+EEGWKYF  M T+Y + P +E Y+CMVDLL +
Sbjct: 690  QXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG  +E  +FI  MPF+P+A +WG+LLG+CRIH + + AE A+R LF+LEP +S NY LM
Sbjct: 750  AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLM 809

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ + + RWED  ++R  M E GV      SWI++ + +H F      HP   +I  + 
Sbjct: 810  ANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKD 869

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L                  D+DE+EK   L  H+EK+A+ +GL+ T    P+R+IKN 
Sbjct: 870  GKL------------------DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNL 911

Query: 1033 RV 1034
            RV
Sbjct: 912  RV 913



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 154/578 (26%), Positives = 246/578 (42%), Gaps = 101/578 (17%)

Query: 193 SGFCFLNETNK-FRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF 251
           SG+    E  K  +C+S +K    +  ++   WN+      +I  Y + G F  A+K F 
Sbjct: 264 SGYTSKGEFKKALKCISDMKLSGVKPDQV--TWNA------IISGYAQSGQFEEASKYFL 315

Query: 252 LY-----FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTK 306
                  F  +   W++ +   E  G +  E L V+ ++  +GV   S  +   +  CT 
Sbjct: 316 EMGGLKDFKPNVVSWTALIAGSEQNGYDF-EALSVFRKMVLEGVKPNSITIASAVSACTN 374

Query: 307 LMAFWLGVEVHASLIK-RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
           L     G E+H   IK    D D+ +  +L+++Y KCR VE A + F  +    D + WN
Sbjct: 375 LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQ-TDLVSWN 433

Query: 366 EIIMVKLRNEKWENAIKLFREM--------------------QFSSAKAI---------- 395
            ++         E AI+L  EM                    Q+   KA           
Sbjct: 434 AMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM 493

Query: 396 -----SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                + TI   L AC +V     GK+IHGYVL++ +E +  V + LISMYS  + LE+A
Sbjct: 494 GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVA 553

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             VF  +   ++  WNS+IS+                              C  SG    
Sbjct: 554 CSVFSELSTRDVVVWNSIISA------------------------------CAQSGRSV- 582

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
               N L LLR M       N  ++   L A ++L  L+ G+E H +I+R GLD   ++ 
Sbjct: 583 ----NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFIL 638

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            SL+DMY +   +Q ++ +FD M  R++V+WN +IS Y   G  ++A  +        +K
Sbjct: 639 NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLK 698

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLK 689
           P+ +++ +L+S  S  G  +E       MK    + P V  +  ++    +   + E+L+
Sbjct: 699 PNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLE 758

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           F  +M  E   PN+    SLL  C           IHC
Sbjct: 759 FIEKMPFE---PNAAVWGSLLGAC----------RIHC 783



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 161/763 (21%), Positives = 306/763 (40%), Gaps = 169/763 (22%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HAQ++  G +   + +   L+  Y + G    A + F     R+   W++ +E Y   G 
Sbjct: 112 HAQLVVNG-VDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG- 169

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           + +E ++++  +  +GV     +   + K C++L  + +G +V+  ++  GF+ +  +K 
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           ++++ + KC  ++ A + F E+ + +D  +WN ++       +++ A+K   +M+ S  K
Sbjct: 230 SILDMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVK 288

Query: 394 AISRTIVKMLQACAKVGAFHEGKQ---------------IHGYVLKSALESN------LS 432
               T   ++   A+ G F E  +               +    L +  E N      LS
Sbjct: 289 PDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALS 348

Query: 433 VCNCLISMYSRNNKLELATRVFDSMK--------------------DHNLSSWNSMISSY 472
           V   ++    + N + +A+ V                         D +L   NS++  Y
Sbjct: 349 VFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYY 408

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL------------ 520
                V+VA   F  +     Q D+++WN +L+G+   GS++  + LL            
Sbjct: 409 AKCRSVEVARRKFGMIK----QTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDI 464

Query: 521 -----------------------RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                                  + M S+G  PN +++S  L A  ++R LK G+E HGY
Sbjct: 465 ITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGY 524

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           +LRN ++    VG++L+ MY   D L+ A  VF  +  R++V WNS+IS     G  VNA
Sbjct: 525 VLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNA 584

Query: 618 KKMLNQMEEEEIKPDLVSW-----------------------------------NSLVSG 642
             +L +M    ++ + V+                                    NSL+  
Sbjct: 585 LDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 644

Query: 643 YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           Y   G  +++  I   M       ++V+W  +IS    +    +++  F   +   +KPN
Sbjct: 645 YGRCGSIQKSRRIFDLMPQR----DLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPN 700

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREV 760
             T ++LL  C   GL++ G +   + +K  +  D  V     ++D+ S++G      E 
Sbjct: 701 HITFTNLLSACSHSGLIEEGWKYFKM-MKTEYAMDPAVEQYACMVDLLSRAGQFNETLEF 759

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK---NS 817
             K                                    F+P+A  + +LL AC+   N 
Sbjct: 760 IEKMP----------------------------------FEPNAAVWGSLLGACRIHCNP 785

Query: 818 GLVEEGWKYFDSMSTDYNIIP-TIEHYSCMVDLLGKAGYLDEA 859
            L E   +Y       + + P +  +Y  M ++   AG  ++A
Sbjct: 786 DLAEYAARYL------FELEPQSSGNYVLMANIYSAAGRWEDA 822



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 122/301 (40%), Gaps = 16/301 (5%)

Query: 173 SLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS 232
           S+ + P  T    A  +C            + R L   K  H  +++   I  S  +  +
Sbjct: 492 SMGMDPNTTTISGALAAC-----------GQVRNLKLGKEIHGYVLR-NHIELSTGVGSA 539

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y        A   F    +R    W+S +      G  V  L ++  E++   V  
Sbjct: 540 LISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNAL-DLLREMNLSNVEV 598

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
            +  +   L  C+KL A   G E+H  +I+ G D    +  +L++ YG+C  ++ + ++F
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            ++    D + WN +I V   +    +A+ LF+  +    K    T   +L AC+  G  
Sbjct: 659 -DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLI 717

Query: 413 HEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS 470
            EG K       + A++  +    C++ + SR  +        + M  + N + W S++ 
Sbjct: 718 EEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLG 777

Query: 471 S 471
           +
Sbjct: 778 A 778


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/613 (35%), Positives = 338/613 (55%), Gaps = 66/613 (10%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            MIS Y      D+A  LF+KM     + D+ +WN +L+G+  +   +    L   M    
Sbjct: 1    MISGYLRNHKFDLARDLFDKMP----ERDLFSWNVMLTGYVRNRDLKTARALFERMP--- 53

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
                                                + D+    +++  Y +N  +  A+
Sbjct: 54   ------------------------------------ERDIVSWNAMLSGYAQNGFVDEAR 77

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            E+F  M  +N ++WN L++ Y   G   +AK++     E ++   LVSWN L+ G+    
Sbjct: 78   EIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLF----ESKMDWTLVSWNCLMGGFV--- 130

Query: 648  QSKEALVIIHHMKNSGIYPNV-----VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                        K   ++ N+     ++W+++I+G  QN    E+L FF++MQ++  + N
Sbjct: 131  -----------RKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLN 179

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
             ++ +  L TC  +  L+ G+++HC  +K G+    YV   L+ MY K G++  AR+ F+
Sbjct: 180  RSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQ 239

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            +   K + SWN MI G+A +G G+EA+ +F  +  TG +PD  T  ++LAAC ++GLV++
Sbjct: 240  EILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQ 299

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G +YF SM+ DY I   + HY+CMVDLLG+AG L+EA + ++ MPF+PDA  WGALLG+ 
Sbjct: 300  GSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGAS 359

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIHG+ E  E A++ +F++EP NS  Y L+  L A S RW D  ++R  M   GVK V  
Sbjct: 360  RIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPG 419

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
            +SW+++   +H F      HP T +IY  L  +  ++K+ GY+  T  V+ D++EEEK  
Sbjct: 420  YSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVH 479

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            +L  H+EKLA+ YG++   +  PIRVIKN RVC DCH A KY+S + GR I LRD  RFH
Sbjct: 480  MLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFH 539

Query: 1063 HFREGECSCNDCW 1075
            +F  G CSC D W
Sbjct: 540  YFEGGSCSCRDFW 552



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 172/367 (46%), Gaps = 28/367 (7%)

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK---MLQ 404
           A  LF ++ +  D   WN ++   +RN   + A  LF  M         R IV    ML 
Sbjct: 14  ARDLFDKMPE-RDLFSWNVMLTGYVRNRDLKTARALFERMP-------ERDIVSWNAMLS 65

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
             A+ G   E ++I     K  L++ +S  N L++ Y +N ++E A R+F+S  D  L S
Sbjct: 66  GYAQNGFVDEAREI---FYKMPLKNGIS-WNGLLAAYVQNGRIEDAKRLFESKMDWTLVS 121

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           WN ++      G+V    +LF+ M     Q D I+W+ +++G+  +G  +  L     MQ
Sbjct: 122 WNCLMG-----GFVRKRRNLFDNMP----QRDSISWSAMIAGYSQNGCSEEALHFFVEMQ 172

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
               R N SS +  L   + +  L+ GR+ H  +++ G     YVG +L+ MY K   + 
Sbjct: 173 RDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSID 232

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            A++ F  +  +++V+WN++I GY   G    A  +   M+   I+PD  +  S+++  S
Sbjct: 233 EARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACS 292

Query: 645 IWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             G   +     + M ++ GI   +V +T ++    +     E+      M+    +P++
Sbjct: 293 HAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNL---MKNMPFEPDA 349

Query: 704 TTMSSLL 710
            T  +LL
Sbjct: 350 ATWGALL 356



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 6/219 (2%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R    WS+ +  Y S  G  +E L  + E+            T  L  C+ + A  LG +
Sbjct: 143 RDSISWSAMIAGY-SQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQ 201

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRN 374
           +H  L+K G+    ++  AL+  Y KC  ++ A   F E+  LE D++ WN +I    R+
Sbjct: 202 LHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEI--LEKDVVSWNTMIHGYARH 259

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVLKSALESNLSV 433
              E A+ +F  M+ +  +    T+V +L AC+  G   +G +  +       + + L  
Sbjct: 260 GFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVH 319

Query: 434 CNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
             C++ +  R  +LE A  +  +M  + + ++W +++ +
Sbjct: 320 YTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGA 358


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/712 (33%), Positives = 369/712 (51%), Gaps = 75/712 (10%)

Query: 365  NEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVL 423
            N+++    R+   E  I L+  ++  +A A+ R +   +L+A +KV AF+ G +IHG   
Sbjct: 89   NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            K     +  +   LI+MY+   ++  A  +FD M                          
Sbjct: 149  KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKM-------------------------- 182

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                       PD + WN ++ G+  +G Y + L L   M+S   +P+   +  VL A  
Sbjct: 183  ---------CHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACG 233

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
                L YGR  H ++  NG   D ++ T+L++MY     +  A++++D + +++      
Sbjct: 234  HAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKH------ 287

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
                                         L+   +++SGY+  G  K+A  I   M    
Sbjct: 288  -----------------------------LIVSTAMLSGYAKLGMVKDARFIFDQM---- 314

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
            I  ++V W+++ISG  +++  +E+LK F +M Q+   P+  TM S++  C  +G L    
Sbjct: 315  IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
             IH    ++GF +   V   LIDMY+K GNL  AREVF     K + SW+ MI  FA++G
Sbjct: 375  WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 434

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            N   AI LF  + E   +P+ +TF  +L AC ++GLVEEG K F SM  ++ I PT EHY
Sbjct: 435  NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHY 494

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
             CMVDL  +A +L +A + I TMPF P+  IWG+L+ +C++HG  E  E A++RL +LEP
Sbjct: 495  GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEP 554

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             +     ++ N+ A   RW DV  +R SM   G+      S I+I+  VH+F      H 
Sbjct: 555  DHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHK 614

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
             + EIY +L  +VS++K +GY P T  +  D++EE+K +++L H+EKLA+ YGL+  ++ 
Sbjct: 615  QSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNE 674

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + IR++KN R+C DCH+  K +S V   EI +RD  RFHH   G CSC D W
Sbjct: 675  SCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 207/425 (48%), Gaps = 9/425 (2%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK  +K+ AF  G+E+H    K GF  D  ++  L+  Y  CR +  A  LF ++    
Sbjct: 127 LLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCH-P 185

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + WN II    +N  +++A++LF +M+ S  K  S  +  +L AC   G    G+ IH
Sbjct: 186 DAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIH 245

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            +V  +    +  +   LI+MY+    ++LA +++D +   +L    +M+S Y  LG V 
Sbjct: 246 EFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVK 305

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  +F++M    I+ D++ W+ ++SG+      Q  L L   M      P+  ++  V+
Sbjct: 306 DARFIFDQM----IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVI 361

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A + +  L      H Y+ R+G    L V  +L+DMY K   L  A+EVF+NM  +N++
Sbjct: 362 SACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVI 421

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +W+S+I+ +   G   +A K+  +M+E  I+P+ V++  ++      G  +E   +   M
Sbjct: 422 SWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSM 481

Query: 660 KNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            N  GI P    +  ++    +    R++++    M      PN     SL+  C   G 
Sbjct: 482 INEHGISPTREHYGCMVDLYCRANFLRKAIELIETMP---FAPNVIIWGSLMSACQVHGE 538

Query: 719 LQNGK 723
            + G+
Sbjct: 539 AELGE 543



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 171/409 (41%), Gaps = 80/409 (19%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+  ++ Y    G   + L ++ ++    +   S IL  +L  C        G  +H  +
Sbjct: 190 WNMIIDGYCQ-NGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFV 248

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD----------------------- 357
              G+  D HL+ AL+N Y  C  ++ A K++  +S                        
Sbjct: 249 KDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDAR 308

Query: 358 ------LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
                 +E DL+ W+ +I     +++ + A+KLF EM    +     T++ ++ AC+ VG
Sbjct: 309 FIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVG 368

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A  +   IH YV +S     LSV N LI MY++   L  A  VF++M   N+ SW+SMI+
Sbjct: 369 ALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMIN 428

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFR 529
           ++   G  D A  LF +M    I+P+ +T+  +L      G  +    L   M    G  
Sbjct: 429 AFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGIS 488

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           P                     RE +G                ++D+Y + + L+ A E+
Sbjct: 489 PT--------------------REHYG---------------CMVDLYCRANFLRKAIEL 513

Query: 590 FDNMK-NRNIVAWNSLIS-----GYCFKGLFVNAKKMLNQMEEEEIKPD 632
            + M    N++ W SL+S     G    G F  AK++L      E++PD
Sbjct: 514 IETMPFAPNVIIWGSLMSACQVHGEAELGEFA-AKRLL------ELEPD 555


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/710 (33%), Positives = 366/710 (51%), Gaps = 87/710 (12%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            L+AC+ +   H G+ IH + + + L+++L V   L+ MY +   L  A  +F +M     
Sbjct: 17   LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR-- 74

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
                                             D++ WN +L+G+  HG Y + +  L  
Sbjct: 75   ---------------------------------DLVAWNAMLAGYAHHGMYHHAVAHLLS 101

Query: 523  MQSL--GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD----------LYVG 570
            MQ      RPN S++  +L  + +   L  G   H Y +R  L  +          + +G
Sbjct: 102  MQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 161

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA----KKMLNQ--- 623
            T+L+DMY K   L  A+ VFD M  RN V W++LI G+        A    K ML Q   
Sbjct: 162  TALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 221

Query: 624  -----------------------------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                                         + +  +  DL + NSL+S Y+  G   +A+ 
Sbjct: 222  FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 281

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            +   M       + V++++L+SG +QN    E+   F +MQ  +++P++ TM SL+  C 
Sbjct: 282  LFDEMA----VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACS 337

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             L  LQ+G+  H   +  G   +  +   LIDMY+K G +  +R+VF    ++ + SWN 
Sbjct: 338  HLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNT 397

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            MI G+ I+G GKEA  LF E+   GF PD +TF  LL+AC +SGLV EG  +F  M   Y
Sbjct: 398  MIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGY 457

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             + P +EHY CMVDLL + G+LDEA++FI++MP + D  +W ALLG+CR++ +++  +  
Sbjct: 458  GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKV 517

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            SR + +L P  + N+ L+ N+ + + R+++   +R      G K     SWI+I+  +H 
Sbjct: 518  SRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHA 577

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP + EIY EL +++  +KKLGY PDT  V QD++EEEK K L+ H+EKLAI 
Sbjct: 578  FVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIA 637

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
            YG++       I V KN RVC DCHT  K++SLV+ R I +RD  RFHHF
Sbjct: 638  YGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/544 (22%), Positives = 224/544 (41%), Gaps = 93/544 (17%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LK C+ L     G  +H   I  G   D+ +  AL++ Y KC  +  A  +F+ +    D
Sbjct: 17  LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA-RD 75

Query: 361 DLLWNEIIMVKLRNEKWENAIK--LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            + WN ++     +  + +A+   L  +MQ    +  + T+V +L   A+ GA  +G  +
Sbjct: 76  LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135

Query: 419 HGYVLKSALESN----------LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           H Y +++ L  N          + +   L+ MY++   L  A RVFD+M   N  +W+++
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 195

Query: 469 ISSYTGLGYVDVAWSLFNKM------------------------------------NSSR 492
           I  +     +  A+ LF  M                                      S 
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 255

Query: 493 IQPDIITWNCLLS-------------------------------GHFTHGSYQNVLTLLR 521
           +  D+   N LLS                               G+  +G  +    + +
Sbjct: 256 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            MQ+    P+ +++  ++ A + L  L++GR SHG ++  GL  +  +  +L+DMY K  
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 375

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            +  +++VF+ M +R+IV+WN++I+GY   GL   A  +  +M      PD V++  L+S
Sbjct: 376 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 435

Query: 642 GYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             S  G   E     H M +  G+ P +  +  ++    +     E+ +F   +Q   ++
Sbjct: 436 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF---IQSMPLR 492

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG----LIDMYSKSGNLKS 756
            +     +LL  C     +  GK++  +  + G        TG    L ++YS +G    
Sbjct: 493 ADVRVWVALLGACRVYKNIDLGKKVSRMIQELG-----PEGTGNFVLLSNIYSAAGRFDE 547

Query: 757 AREV 760
           A EV
Sbjct: 548 AAEV 551



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 182/368 (49%), Gaps = 24/368 (6%)

Query: 143 HSIYHHFNTRT-SINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISS--GFCFLN 199
           H +YHH      S+    H  +PN+     T +AL P   LA+Q  L+  +S   +C   
Sbjct: 89  HGMYHHAVAHLLSMQMQMHRLRPNA----STLVALLPL--LAQQGALAQGTSVHAYCIRA 142

Query: 200 ETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYA 259
             +  R   + KSK    + +G          +L+  Y + G    A + F    +R+  
Sbjct: 143 CLHPNR---NSKSKLTDGVLLGT---------ALLDMYAKCGSLLYARRVFDAMPARNEV 190

Query: 260 DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHA 318
            WS+ +  +       Q  L ++  +  +G+ F S   +   L+ C  L    +G ++HA
Sbjct: 191 TWSALIGGFVLCSRMTQAFL-LFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHA 249

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
            L K G   D+    +L++ Y K   ++ A  LF E++ ++D + ++ ++   ++N + E
Sbjct: 250 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA-VKDTVSYSALVSGYVQNGRAE 308

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A  +F++MQ  + +  + T+V ++ AC+ + A   G+  HG V+   L S  S+CN LI
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY++  +++L+ +VF+ M   ++ SWN+MI+ Y   G    A +LF +MN+    PD +
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428

Query: 499 TWNCLLSG 506
           T+ CLLS 
Sbjct: 429 TFICLLSA 436



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 12/198 (6%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M +  + PN+ T    L+ C  L     G+ IH   +  G   D +V+T L+DMY K   
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI--LLFHELLETGFQPDAITFTALL 811
           L  A  +F     + L +WN M+ G+A +G    A+  LL  ++     +P+A T  ALL
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 812 AACKNSGLVEEGWKY---------FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
                 G + +G              + ++   +   +   + ++D+  K G L  A   
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 863 IRTMPFKPDATIWGALLG 880
              MP + + T W AL+G
Sbjct: 181 FDAMPARNEVT-WSALIG 197


>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like
            [Cucumis sativus]
 gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like
            [Cucumis sativus]
          Length = 642

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/584 (37%), Positives = 339/584 (58%), Gaps = 12/584 (2%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGRE 553
            PD+  +N L+ G     +  N L L   M+      P+  S + +L+A    R L  G +
Sbjct: 68   PDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQ 127

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             H   +  GLD  L+VGT+L+ MY +  CL  A++VFD M   NIVAWN++++  CF+  
Sbjct: 128  LHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAA-CFRCE 186

Query: 614  FV-NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
             V +A+++   M       +L SWN +++GY+  G+ + A  +   M       + V+W+
Sbjct: 187  GVKDAEQVFRCMPIR----NLTSWNIMLAGYTKAGELQLAREVFMKMP----LKDDVSWS 238

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            ++I G   N N+ ++  FF ++++E ++PN  +++ +L  C   G  + G+ +H    K+
Sbjct: 239  TMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKS 298

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF++   V   LID YSK GNL  AR VF     ++  SW  MI G A++G G+EAI LF
Sbjct: 299  GFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLF 358

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            +E+ E+  +PD+ITF ++L AC ++GLV+ G  YF  M   Y I P IEHY CMVDL G+
Sbjct: 359  NEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGR 418

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG L +A+DF+  MP  P+  +W  LLG+C IHG+L  A    R+L +L+P NS ++ L+
Sbjct: 419  AGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLL 478

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A++ +W+DV  LR SM    +K    WS I++++I++ F A    +    E + +L
Sbjct: 479  SNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKL 538

Query: 973  YHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
              ++S ++ + GYVP+   V  DI+ EEK   +  H+EKLA+ +G+ K      IRV+KN
Sbjct: 539  REIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKN 598

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             R+C DCHT  K +S V   EI +RD +RFH F  G CSC D W
Sbjct: 599  LRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 187/399 (46%), Gaps = 41/399 (10%)

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS-AKAISRTIVKMLQAC 406
           A +LF ++ +  D  ++N +I     ++   NA++LF EM+  S A   S +   +L+A 
Sbjct: 58  ARRLFLDIRN-PDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAA 116

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           A   A   G Q+H   +   L+S+L V   LISMY+    L  A +VFD M + N+ +WN
Sbjct: 117 ANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWN 176

Query: 467 S-------------------------------MISSYTGLGYVDVAWSLFNKMNSSRIQP 495
           +                               M++ YT  G + +A  +F KM       
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMP----LK 232

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D ++W+ ++ G   +G++ +     R ++  G RPN  S++ VL A  +    ++GR  H
Sbjct: 233 DDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILH 292

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
           G++ ++G    + V  +L+D Y K   L  A+ VFDNM  R+ V+W ++I+G    G   
Sbjct: 293 GFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGE 352

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSL 674
            A ++ N+MEE  IKPD +++ S++   S  G           M N+ GI P +  +  +
Sbjct: 353 EAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCM 412

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +    +    +++  F  QM    I PN     +LL  C
Sbjct: 413 VDLYGRAGKLQQAYDFVCQMP---ISPNDIVWRTLLGAC 448



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 1/166 (0%)

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           Y K  +++ A ++F ++  L+DD+ W+ +I+    N  + +A   FRE++    +    +
Sbjct: 213 YTKAGELQLAREVFMKMP-LKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVS 271

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           +  +L ACA+ GAF  G+ +HG+V KS     +SV N LI  YS+   L++A  VFD+M 
Sbjct: 272 LTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNML 331

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +  SW +MI+     GY + A  LFN+M  S I+PD IT+  +L
Sbjct: 332 RRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISIL 377



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 17/310 (5%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G+   A + F     +    WS+ +  + +  G   +    + E+  +G+      
Sbjct: 213 YTKAGELQLAREVFMKMPLKDDVSWSTMIVGF-AHNGNFNDAFAFFREVRREGMRPNEVS 271

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +L  C +  AF  G  +H  + K GF   + +  AL++ Y KC +++ A  +F  + 
Sbjct: 272 LTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNML 331

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG- 415
                + W  +I     +   E AI+LF EM+ S+ K  S T + +L AC+  G    G 
Sbjct: 332 R-RSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGC 390

Query: 416 ----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS 470
               + ++ Y ++  +E       C++ +Y R  KL+ A      M    N   W +++ 
Sbjct: 391 SYFSRMVNTYGIEPVIEHY----GCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLG 446

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGM--QSLG 527
           + +  G + +A  +  K   S + P+    + LLS  +   G +++V  L R M  Q L 
Sbjct: 447 ACSIHGNLYLAGQV--KRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLK 504

Query: 528 FRPNGSSVSV 537
             P  S + V
Sbjct: 505 KTPGWSMIEV 514


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic [Vitis vinifera]
          Length = 711

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/631 (35%), Positives = 348/631 (55%), Gaps = 38/631 (6%)

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G +  A  +FN++ +    P   T N ++ G+      +  +   + M   G  P+  + 
Sbjct: 88   GSLPYARLVFNQIPN----PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTF 143

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              + ++     +L  G++ H +  + G   D Y+  +LM+MY    CL +A++VFD M N
Sbjct: 144  PSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN 200

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            +++V+W ++I  Y    L   A K+  +ME   +KP+ ++  ++++  +     + A  +
Sbjct: 201  KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQV 260

Query: 656  IHHMKNSGI-------------------YP------------NVVTWTSLISGSLQNENY 684
              ++  +GI                   YP            N+  W  +I+G +++ +Y
Sbjct: 261  HKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDY 320

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L  F +MQ   +K +  TM+SLL  C  LG L+ GK +H    K     D  + T L
Sbjct: 321  EEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTAL 380

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMY+K G+++SA  VF++   K + +W  +I+G A+ G G +A+ LFHE+  +  +PDA
Sbjct: 381  VDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDA 440

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            ITF  +LAAC ++GLV EG  YF+SM   Y I P+IEHY CMVD+LG+AG + EA D I+
Sbjct: 441  ITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQ 500

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP  PD  +   LL +CRIHG+L  AE A+++L +L+P N   Y L+ N+ +    WE 
Sbjct: 501  NMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEA 560

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
             +++R  M E  +K     S I++  +VH F      HP + EIY  L  ++  +K  GY
Sbjct: 561  AKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGY 620

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            VPD   V  D+DE+EK   L  H+EKLAI +GL+ T    PIRV+KN RVCSDCH+A K+
Sbjct: 621  VPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKF 680

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S V  REI +RD  RFHHF +G CSC D W
Sbjct: 681  ISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 190/402 (47%), Gaps = 40/402 (9%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++H    K GF  D +++  LMN Y  C  + SA K+F ++ + +  + W  +I    
Sbjct: 156 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN-KSVVSWATMIGAYA 214

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           + +    AIKLFR M+ +S K    T+V +L ACA+       KQ+H Y+ ++ +  +  
Sbjct: 215 QWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTV 274

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           + + L+ +Y +     LA  +F+ M + NL  WN MI+ +      + A SLFN+M  S 
Sbjct: 275 LTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 334

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++ D +T                       M SL            L A T L  L+ G+
Sbjct: 335 VKGDKVT-----------------------MASL------------LIACTHLGALELGK 359

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H YI +  ++ D+ +GT+L+DMY K   +++A  VF  M  ++++ W +LI G    G
Sbjct: 360 WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCG 419

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
             + A ++ ++M+  E+KPD +++  +++  S  G   E +   + M N  GI P++  +
Sbjct: 420 QGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHY 479

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++    +     E+      +Q   + P+   +  LL  C
Sbjct: 480 GCMVDMLGRAGRIAEAEDL---IQNMPMAPDYFVLVGLLSAC 518



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 142/297 (47%), Gaps = 5/297 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H    K+G  + SD  ++ +L+  Y   G   SA K F    ++S   W++ +  Y 
Sbjct: 157 KQLHCHSTKLG--FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYA 214

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
            +     E ++++  +    V      L  +L  C +        +VH  + + G  F  
Sbjct: 215 QWDLP-HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHT 273

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            L  ALM+ Y KC     A  LF+++ + ++   WN +I   + +  +E A+ LF EMQ 
Sbjct: 274 VLTSALMDVYCKCGCYPLARDLFNKMPE-KNLFCWNIMINGHVEDSDYEEALSLFNEMQL 332

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           S  K    T+  +L AC  +GA   GK +H Y+ K  +E ++++   L+ MY++   +E 
Sbjct: 333 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 392

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           A RVF  M + ++ +W ++I      G    A  LF++M  S ++PD IT+  +L+ 
Sbjct: 393 AMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 449



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 2/185 (1%)

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           + +E L ++ E+   GV      +  +L  CT L A  LG  +H  + K   + DV L  
Sbjct: 319 DYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGT 378

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL++ Y KC  +ESA ++F E+ + +D + W  +I+      +   A++LF EMQ S  K
Sbjct: 379 ALVDMYAKCGSIESAMRVFQEMPE-KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVK 437

Query: 394 AISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
             + T V +L AC+  G  +EG    +    K  ++ ++    C++ M  R  ++  A  
Sbjct: 438 PDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAED 497

Query: 453 VFDSM 457
           +  +M
Sbjct: 498 LIQNM 502


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella bursa-pastoris]
          Length = 706

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/668 (35%), Positives = 357/668 (53%), Gaps = 79/668 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F+ +     +P+++ WN +  GH       + L L   M SLG  PN
Sbjct: 50   FDGLTY---AISVFDSIQ----EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPN 102

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L+A  + +  + G++ HG++L+ G D DLYV TSL+ MYVKN   ++A++VFD
Sbjct: 103  SYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFD 162

Query: 592  NMKNRNIVA-------------------------------WNSLISGYCFKGLFVNAKKM 620
               +R++V+                               WN+LISGY   G +  A ++
Sbjct: 163  QSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALEL 222

Query: 621  LNQMEEEEIKPD----------------------LVSW-------------NSLVSGYSI 645
              +M +  +KPD                      + SW             N+L+  Y  
Sbjct: 223  FKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIK 282

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   +     Y +V++W +LI G      Y+E+L  F +M +    PN  T
Sbjct: 283  CGEVETASGLFEGLS----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVT 338

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            M S+L  C  LG +  G+ IH    K   G    + + T LIDMY+K G++++A++VF  
Sbjct: 339  MLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDS 398

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              N++L+SWN MI GFA++G    A  +F  + + G +PD ITF  LL+AC +SG+++ G
Sbjct: 399  MLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLG 458

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F SM+ DY I P +EHY CM+DLLG +G   EA + I +M   PD  IW +LL +C+
Sbjct: 459  RHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACK 518

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG++E  E  ++ L K+EP NS +Y L+ N+ A + RW +V + R  +++ G+K V   
Sbjct: 519  MHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGC 578

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I+ID +VH F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K   
Sbjct: 579  SSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 638

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RFHH
Sbjct: 639  LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 698

Query: 1064 FREGECSC 1071
            F +G CSC
Sbjct: 699  FXDGVCSC 706



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 251/556 (45%), Gaps = 78/556 (14%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLI-FHYL--EFGDFTSAAKAFFLYFSRSYADW 261
           + L S++  HA+MIK G + N++  +  LI F  L   F   T A   F      +   W
Sbjct: 13  KTLQSLRIIHAKMIKTG-LHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIW 71

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           ++    + +   +    L ++  +   G++  S     +LK C K  AF  G ++H  ++
Sbjct: 72  NTMFRGH-ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVL 130

Query: 322 KRGFDFDVHLKCALMNFY---GKCRD----------------------------VESANK 350
           K G D D+++  +L+  Y   G+  D                            + SA K
Sbjct: 131 KLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQK 190

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F E+  ++D + WN +I        ++ A++LF+EM  ++ K    T+V +L ACA+  
Sbjct: 191 MFDEIP-VKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSA 249

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           +   G+Q+H ++      SNL + N LI +Y +  ++E A+ +F+ +   ++ SWN++I 
Sbjct: 250 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIG 309

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            YT +     A  LF +M                               LR  +S    P
Sbjct: 310 GYTHMNLYKEALLLFQEM-------------------------------LRSGES----P 334

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILR--NGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           N  ++  +L A   L  +  GR  H YI +   G+     + TSL+DMY K   ++ AQ+
Sbjct: 335 NEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQ 394

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VFD+M NR++ +WN++I G+   G    A  + ++M ++ I+PD +++  L+S  S  G 
Sbjct: 395 VFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGM 454

Query: 649 SKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                 I   M ++  I P +  +  +I     +  ++E+ +    M+ +   P+     
Sbjct: 455 LDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMD---PDGVIWC 511

Query: 708 SLLQTCGGLGLLQNGK 723
           SLL+ C   G ++ G+
Sbjct: 512 SLLKACKMHGNVELGE 527


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/798 (30%), Positives = 404/798 (50%), Gaps = 75/798 (9%)

Query: 313  GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            G  +H  ++KRG   D+  +  L+NFY +   ++ A+KLF E+         N I  V L
Sbjct: 54   GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQT------NTISFVTL 107

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
                   A    R+ QF  A      I            F EG +++ +V  + L+    
Sbjct: 108  -------AQGYSRDHQFHQALHFILRI------------FKEGHEVNPFVFTTLLK---- 144

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
                L+SM   +    L   V+      +     ++I +Y+  G VDVA  +F+ +    
Sbjct: 145  ---LLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCK- 200

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
               D+++W  +++ +  +  Y+  L L   M+ +G++PN  ++S  L++   L     G+
Sbjct: 201  ---DMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGK 257

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
              HG  L+   D+DL+VG +L+++Y K+  + +AQ +F+ M   +++ W+ +I+ Y    
Sbjct: 258  SVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSD 317

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSW-----------------------------------N 637
                A  +  +M +  + P+  ++                                   N
Sbjct: 318  RSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSN 377

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            +++  Y+  G+ + ++ +   + +     N VTW ++I G +Q  +   ++  F  M + 
Sbjct: 378  AIMDVYAKCGEIENSMKLFEELPDR----NDVTWNTIIVGYVQLGDGERAMNLFTHMLEH 433

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            D++P   T SS+L+    L  L+ G +IH L +K  + KD  VA  LIDMY+K G +  A
Sbjct: 434  DMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDA 493

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            R  F K   +   SWN MI G++++G   EA+ LF  +  T  +P+ +TF  +L+AC N+
Sbjct: 494  RLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNA 553

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GL+ +G  +F+SMS DY+I P IEHY+CMV LLG+ G  DEA   I  + ++P   +W A
Sbjct: 554  GLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRA 613

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+C IH  ++   + ++ + ++EP + A + L+ N+ A + RW++V  +R  M +  V
Sbjct: 614  LLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKV 673

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            +     SW++   +VH FS     HP    I   L  L  + +  GYVPD   V  D+ +
Sbjct: 674  RKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQD 733

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            +EK + L  H+E+LA+ YGL++T     IR+IKN R+C DCHT  K +S V  REI +RD
Sbjct: 734  DEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRD 793

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFHHFR G CSC D W
Sbjct: 794  INRFHHFRHGVCSCGDYW 811



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/528 (22%), Positives = 236/528 (44%), Gaps = 79/528 (14%)

Query: 396 SRTIVKMLQACAKVGAFH-EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
           S +   MLQ   + GA    GK +H ++LK     +L   N L++ Y ++N L+ A+++F
Sbjct: 34  SHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLF 93

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D M   N  S+ ++   Y+                                 H  H +  
Sbjct: 94  DEMPQTNTISFVTLAQGYS-------------------------------RDHQFHQALH 122

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
            +L + +     G   N    + +L+ +  + L       H  + + G   D +VGT+L+
Sbjct: 123 FILRIFKE----GHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALI 178

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--- 631
           D Y     +  A+ VFD++  +++V+W  +++ Y     +  + ++ NQM     KP   
Sbjct: 179 DAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNF 238

Query: 632 --------------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHM 659
                                           DL    +L+  Y+  G+  +A  +   M
Sbjct: 239 TISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
             + + P    W+ +I+   Q++  +E+L  F++M+Q  + PN+ T +S+LQ C     L
Sbjct: 299 PKTDLIP----WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSL 354

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             GK+IH   LK G   + +V+  ++D+Y+K G ++++ ++F +  ++   +WN +I+G+
Sbjct: 355 DLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGY 414

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD-SMSTDYNIIP 838
              G+G+ A+ LF  +LE   QP  +T++++L A  +   +E G +    ++ T YN   
Sbjct: 415 VQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDT 474

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            +   + ++D+  K G +++A      M  K D   W A++    +HG
Sbjct: 475 VVA--NSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHG 519



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 232/502 (46%), Gaps = 44/502 (8%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA + K+G   ++D  V  +LI  Y   G+   A   F     +    W+  +  Y    
Sbjct: 159 HACVYKLGH--HADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAE-N 215

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
              +E L+++ ++   G    +  ++  LK C  L AF +G  VH   +K  +D D+ + 
Sbjct: 216 CFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVG 275

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  Y K  ++  A +LF E+    D + W+ +I    ++++ + A+ LF  M+ +S 
Sbjct: 276 IALLELYAKSGEIIDAQRLFEEMPK-TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSV 334

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
              + T   +LQACA   +   GKQIH  VLK  L SN+ V N ++ +Y++  ++E + +
Sbjct: 335 VPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMK 394

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +F+ + D N  +WN++I  Y  LG  + A +LF  M    +QP  +T+            
Sbjct: 395 LFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTY------------ 442

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                  S VL+A   L  L+ G + H   ++   + D  V  S
Sbjct: 443 -----------------------SSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANS 479

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+DMY K   + +A+  FD M  R+ V+WN++I GY   G+ + A  + + M+  + KP+
Sbjct: 480 LIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPN 539

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
            +++  ++S  S  G   +       M K+  I P +  +T ++    +   + E++K  
Sbjct: 540 KLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLI 599

Query: 692 IQMQQEDIKPNSTTMSSLLQTC 713
            ++  +   P+     +LL  C
Sbjct: 600 GEIAYQ---PSVMVWRALLGAC 618



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/554 (24%), Positives = 230/554 (41%), Gaps = 108/554 (19%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           + T +LKL   +    L   +HA + K G   D  +  AL++ Y    +V+ A  +F ++
Sbjct: 138 VFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDI 197

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
              +D + W  ++     N  +E +++LF +M+    K  + TI   L++C  + AF+ G
Sbjct: 198 C-CKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVG 256

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           K +HG  LK   + +L V   L+ +Y+++ ++  A R+F+ M   +L  W+ MI+ Y   
Sbjct: 257 KSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQS 316

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                A  LF +M  + + P+          +FT  S                       
Sbjct: 317 DRSKEALDLFLRMRQTSVVPN----------NFTFAS----------------------- 343

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
             VLQA      L  G++ H  +L+ GL+ +++V  ++MD+Y K   ++N+ ++F+ + +
Sbjct: 344 --VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPD 401

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------------ 631
           RN V WN++I GY   G    A  +   M E +++P                        
Sbjct: 402 RNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQI 461

Query: 632 -----------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                      D V  NSL+  Y+  G+  +A +    M       + V+W ++I G   
Sbjct: 462 HSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKR----DEVSWNAMICGYSM 517

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           +    E+L  F  MQ  D KPN  T   +L  C   GLL  G+                 
Sbjct: 518 HGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQ----------------- 560

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
                +  SK  ++K   E            + CM+      G   EA+ L  E+    +
Sbjct: 561 --AHFESMSKDYDIKPCIE-----------HYTCMVWLLGRLGRFDEAMKLIGEI---AY 604

Query: 801 QPDAITFTALLAAC 814
           QP  + + ALL AC
Sbjct: 605 QPSVMVWRALLGAC 618


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/895 (29%), Positives = 432/895 (48%), Gaps = 80/895 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            H  ++K G +   D  V + + H Y   G   +A K F      +   W+S +  Y S  
Sbjct: 219  HGFVVKTGIL--GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGY-SDS 275

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G   E+L V+  +  +GV         +   C  L    LG +V   +I+ GF+  V + 
Sbjct: 276  GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVA 335

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             +L++ +     VE A  +F  +++  D + WN +I     +     +++ F  M+    
Sbjct: 336  NSLISMFSSFSSVEEACYVFDHMNEC-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 394

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +  S T+  +L  C+ V     G+ IHG V+K  L+SN+ +CN L+++YS   + E A  
Sbjct: 395  ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 454

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            VF +M +                                    D+I+WN +++ +   G 
Sbjct: 455  VFQAMTER-----------------------------------DLISWNSMMACYVQDGK 479

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
              + L +L  +  +G   N  + +  L A +    L   +  H  I+  G    L VG +
Sbjct: 480  CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA 539

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF----------------KGLFVN 616
            L+ MY K   +  A++V   M   + V WN+LI G+                  KG+  N
Sbjct: 540  LVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 599

Query: 617  AKKMLNQMEEEEIKPDLVSW--------------------NSLVSGYSIWGQSKEALVII 656
               M++ +       DL+                      NSL++ Y+  G    +  I 
Sbjct: 600  YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 659

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
              + N     + +TW ++++ +  +    E+LK F +M+   +  +  + S  L     L
Sbjct: 660  DGLGNK----SPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL 715

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
             +L+ G+++H L +K GF  D +V    +DMY K G +    ++  +  N++  SWN +I
Sbjct: 716  AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 775

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
              FA +G  ++A   FHE+L+ G +PD +TF +LL+AC + GLV+EG  Y+DSM+ ++ +
Sbjct: 776  SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 835

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P IEH  C++DLLG++G L  A  FI+ MP  P+   W +LL +CRIHG+LE A   + 
Sbjct: 836  FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAE 895

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             L +L+P + + Y L  N+ A S +WEDVE LR  M    +K     SW+++   VH F 
Sbjct: 896  HLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFG 955

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
                 HP    I  +L  L+   K+ GYVPDT     D+DEE+K   L +H+E+LA+ +G
Sbjct: 956  MGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFG 1015

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            L+ T   + +R+ KN RVC DCH+  K++S + GR+I LRD  RFHHF  G+CSC
Sbjct: 1016 LINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 208/829 (25%), Positives = 364/829 (43%), Gaps = 119/829 (14%)

Query: 149 FNT--RTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQ-------------LSCISS 193
           FNT  +T + + R     ++IT +   +   P +  A+Q +               C+  
Sbjct: 16  FNTIPKTPVGKTRQWAPVSTITTASALINETPVENFAEQVKDDDLKTSNAGSRRWGCLDG 75

Query: 194 GFC--FLNETNK---FRCLSSV----------------KSKHAQMIKMGKIWNSDDMVKS 232
                FL + +     RCL++V                K+ HA  I +G +        +
Sbjct: 76  DIAKVFLQQQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCI-VGSVNLGIFQTNT 134

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y +FG+   A   F     R+ A WS+ L  Y   G   +E + ++ ++ G GV  
Sbjct: 135 LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVG-LYEEAVGLFCQMWGLGVEP 193

Query: 293 RSRILTIILKLCTK--LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
              ++  ++  C++   MA   G +VH  ++K G   DV++  AL++FYG    V +A K
Sbjct: 194 NGFMVASLITACSRSGYMADE-GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK 252

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LF E+ D  + + W  +++    +      + +++ M+         T   +  +C  + 
Sbjct: 253 LFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLE 311

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
               G Q+ G++++   E ++SV N LISM+S  + +E A  VFD M + ++ SWN+MIS
Sbjct: 312 DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 371

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
           +Y                                     HG  +  L     M+ L    
Sbjct: 372 AYA-----------------------------------HHGLCRESLRCFHWMRHLHNET 396

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           N +++S +L   + +  LK+GR  HG +++ GLD ++ +  +L+ +Y +    ++A+ VF
Sbjct: 397 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 456

Query: 591 DNMKNRNIVAWNSLIS-----GYCFKGLFVNAK-----KMLNQME--------------- 625
             M  R++++WNS+++     G C  GL + A+     K++N +                
Sbjct: 457 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 516

Query: 626 EEEI----------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
           E +I             L+  N+LV+ Y   G   EA  ++  M      P+ VTW +LI
Sbjct: 517 ESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ----PDRVTWNALI 572

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL-GLLQNGKEIHCLCLKNGF 734
            G  +NE   E++K +  ++++ I  N  TM S+L  C     LL++G  IH   +  GF
Sbjct: 573 GGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGF 632

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
             D YV   LI MY+K G+L S+  +F    NK+  +WN M+   A +G G+EA+ +F E
Sbjct: 633 ESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGE 692

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
           +   G   D  +F+  LAA  N  ++EEG +    +         +   +  +D+ GK G
Sbjct: 693 MRNVGVNLDQFSFSGGLAATANLAVLEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCG 751

Query: 855 YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            + +    +   P       W  L+ +   HG  + A      + KL P
Sbjct: 752 EMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 8/305 (2%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
            CL   K  HA +I  G     D ++   +L+  Y + G    A K            W+
Sbjct: 513 ECLIESKIVHALIIVAGF---HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWN 569

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWL-GVEVHASLI 321
           + +  +     E  E ++ +  +  KG+      +  +L  C+        G+ +HA ++
Sbjct: 570 ALIGGHAE-NEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIV 628

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
             GF+ D ++K +L+  Y KC D+ S+N +F  + + +  + WN ++     +   E A+
Sbjct: 629 LTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGN-KSPITWNAMVAANAHHGCGEEAL 687

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
           K+F EM+         +    L A A +    EG+Q+HG V+K   ES+L V N  + MY
Sbjct: 688 KIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMY 747

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            +  ++    ++     + +  SWN +IS++   G    A   F++M     +PD +T+ 
Sbjct: 748 GKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 807

Query: 502 CLLSG 506
            LLS 
Sbjct: 808 SLLSA 812


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
            [Vitis vinifera]
          Length = 707

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/668 (34%), Positives = 359/668 (53%), Gaps = 49/668 (7%)

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI----QPDIITWNCLL 504
            L+TR F     H L+    +I  Y+ LG +  A +LF+  +         P+    N +L
Sbjct: 48   LSTRGFLLHTPHFLAR---LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTML 104

Query: 505  SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
              +   G     + L   MQ +G   N  +   VL+         +G   HG ++R G  
Sbjct: 105  RAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFG 164

Query: 565  YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
             DL+V  +L+DMY K   + +A EVFD M  R++V W ++I+ Y      + A  +  +M
Sbjct: 165  SDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKM 224

Query: 625  EEEEIKPDLVS-----------------------------------WNSLVSGYSIWGQS 649
            +EE    D ++                                    NS+V  Y+  G  
Sbjct: 225  QEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNV 284

Query: 650  KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
            + A ++   M+      N ++W S++SG  QN    ++L  F QMQ  +  PN  T   +
Sbjct: 285  ERARLVFDRMEER----NGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 340

Query: 710  LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS--ANK 767
            +  C  LG    G+++H   + +    D  +   ++DMY K G+L +A E+F       +
Sbjct: 341  VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 400

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             ++SWN +I G+ ++G+GKEA+ LF  +   G +P+ ITFT++L+AC ++GL++EG K F
Sbjct: 401  DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 460

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
              M T  ++ P ++HY+CMVD+LG+AG+L+EA+  I+ +P +P   +WGALL +CRIHG+
Sbjct: 461  ADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 519

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
             E  EIA+  LF+LEP ++  Y LM N+ A SN+W++VE +R +M   G+K    +S I+
Sbjct: 520  TELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIE 579

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
                VH F       P   E+Y ++  L  EMK +GYVPD  CV  D++ E+K  +L  H
Sbjct: 580  FGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYH 639

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLA+ +G+MK     PI+V KN RVCSDCH A K++S + GR+I +RDG RFHHF+ G
Sbjct: 640  SEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGG 699

Query: 1068 ECSCNDCW 1075
             CSC D W
Sbjct: 700  RCSCGDYW 707



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 235/521 (45%), Gaps = 58/521 (11%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD------ 260
           L+++K  H+ +   G + ++   +  LI  Y + GD  SA   F       +        
Sbjct: 38  LTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNS 97

Query: 261 --WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
              ++ L  Y +  G   E ++++  +   GV   +     +LK+C   +    G  VH 
Sbjct: 98  FLCNTMLRAYAN-AGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHG 156

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
            +++ GF  D+ ++ AL++ Y KC ++  A+++F  +  + D + W  +I +  + E+  
Sbjct: 157 QVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRML-IRDVVCWTAMITLYEQAERPL 215

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A+ LFR+MQ         T + +  A  ++G       +HGY + +    ++SV N ++
Sbjct: 216 KALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIV 275

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY++   +E A  VFD M++ N  SWNSM+S YT  G    A SLFN+M +S   P+ +
Sbjct: 276 GMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPV 335

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
           T                                     +++ A + L     GR+ H ++
Sbjct: 336 T-----------------------------------ALIMVSACSYLGSKHLGRKLHNFV 360

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN--MKNRNIVAWNSLISGYCFKGLFVN 616
           + + +D D  +  ++MDMY+K   L  A E+F+N  +  R++ +WN LISGY   G    
Sbjct: 361 ISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKE 420

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
           A ++ ++M+ E ++P+ +++ S++S  S  G   E       M    + P +  +  ++ 
Sbjct: 421 ALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVD 480

Query: 677 ----GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                   NE +R        +++   +P+     +LL  C
Sbjct: 481 MLGRAGFLNEAFR-------LIKKIPSRPSDEVWGALLLAC 514



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 20/183 (10%)

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFI-KDAYVATGLIDMYSKSGNLKSAREVF------ 761
           LLQ C  L  L   K IH      GF+    +    LI +YSK G+L SAR +F      
Sbjct: 31  LLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 762 ----RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
                ++ N  L   N M+  +A  G   EAI L+  +   G   +  T+  +L  C + 
Sbjct: 88  HHGHTQAPNSFLC--NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASE 145

Query: 818 -GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            G V     +   + T +     +E  + +VD+  K G + +A +    M  + D   W 
Sbjct: 146 LGAVFGEVVHGQVVRTGFGSDLFVE--AALVDMYAKCGEIGDAHEVFDRMLIR-DVVCWT 202

Query: 877 ALL 879
           A++
Sbjct: 203 AMI 205


>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Vitis vinifera]
          Length = 700

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/714 (33%), Positives = 369/714 (51%), Gaps = 28/714 (3%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN II   ++N   E+A+ +F  M +        TI  +L AC  + A   GK IH   L
Sbjct: 13   WNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHAIAL 72

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            K  +  N+ V   +I MYS+    + A +VF   ++ N + WN MI++Y   G V+ A  
Sbjct: 73   KHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVEDALG 132

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            L   M     +PD+IT+N +LSGH  +G       LL  M  +G +PN  S +V++    
Sbjct: 133  LLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVLISGFQ 192

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            +                +GL Y+      +M     + C  N  EV +     N +    
Sbjct: 193  Q----------------SGLSYEALKVFRIMQ-SPSDGC--NPNEVLNLSMRPNPITITG 233

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
             +       L+   K++         +P++   ++LV  Y+       A  +   +    
Sbjct: 234  ALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGR- 292

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               N V+W +L++G + N+   E+LK F++M  E ++P+S T   L   CG +  ++ G+
Sbjct: 293  ---NTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGR 349

Query: 724  EIHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
             +H    K     +K+A +A+ LIDMY+K G++  A+ VF     K +  WN MI  F++
Sbjct: 350  GLHGYAAKCQLDELKNA-IASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSV 408

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G  + A  +F ++   G  PD ITF +LL+AC   GLVEEGWKYF+SM   Y +  T+E
Sbjct: 409  HGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLE 468

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+CMV +LG AG LDEA DFIR MP+ PDA +W  LL +CR+H + E  E A++ LF+L
Sbjct: 469  HYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFEL 528

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            EP N+ NY L+ N+   S  W+  + LR  M    + ++   S++ +   +  F    + 
Sbjct: 529  EPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHICTFKGGESS 588

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
            HP   EI      L  +M+  GY P    V+ D +E+E       HTEKLAI +G++ + 
Sbjct: 589  HPELEEILEAWDKLARKMELSGYFP-LDPVFDD-EEKELDPFSCLHTEKLAICFGIISSN 646

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +  P+ V KN R+C DCHT+AK +S + GREIF++D   +HH ++G CSC D W
Sbjct: 647  TYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGICSCQDRW 700



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 215/416 (51%), Gaps = 23/416 (5%)

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M    +QP + +WN ++SG   +G  ++ L +   M      PN  +++ +L A T L+ 
Sbjct: 1   MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 60

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L+ G+  H   L++G+  ++YV  S++DMY K      A++VF   +N+N   WN +I+ 
Sbjct: 61  LRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAA 120

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
           Y  +G   +A  +L  M+++  KPD++++N+++SG++  G   +A  ++  M   G+ PN
Sbjct: 121 YVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPN 180

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQE------------DIKPNSTTMSSLLQTCGG 715
           VV++  LISG  Q+    E+LK F  MQ               ++PN  T++  L  C  
Sbjct: 181 VVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACAD 240

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
           L L   GKEIH   L+NGF  + +V++ L+DMY+K  ++ SA +VF +   +   SWN +
Sbjct: 241 LNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNAL 300

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE-----EGWKYFDSM 830
           + G+      +EA+ LF E+L  G QP +ITF  L  AC +   +       G+     +
Sbjct: 301 MAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQL 360

Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
               N I      S ++D+  K G + +A     +   + D  +W A++ +  +HG
Sbjct: 361 DELKNAIA-----SALIDMYAKCGSILDAKSVFDS-EVEKDVPLWNAMISAFSVHG 410



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 214/470 (45%), Gaps = 57/470 (12%)

Query: 296 ILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           I+TI  IL  CT L A  LG  +HA  +K G   +V+++ ++++ Y KC   + A K+F 
Sbjct: 45  IITIASILPACTGLKALRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFV 104

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           +  + ++  +WNE+I   +   K E+A+ L R MQ    K    T   +L   A+ G   
Sbjct: 105 KAEN-KNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKT 163

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK--------------- 458
           +  ++   +++  L+ N+   N LIS + ++     A +VF  M+               
Sbjct: 164 QAFELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLS 223

Query: 459 ----------------DHNLSSWNSMISSYT-----------GLGYVDVAWSLFNKMNSS 491
                           D NL      I  YT               VD+ ++  + M+S+
Sbjct: 224 MRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDM-YAKCHDMDSA 282

Query: 492 -----RIQP-DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
                RI   + ++WN L++G+  +   +  L L   M   G +P+  +  ++  A  ++
Sbjct: 283 NKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDI 342

Query: 546 RLLKYGRESHGYILRNGLD-YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             +++GR  HGY  +  LD     + ++L+DMY K   + +A+ VFD+   +++  WN++
Sbjct: 343 AAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAM 402

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-G 663
           IS +   G+  NA  +  QME   I PD +++ SL+S  +  G  +E     + M+ S G
Sbjct: 403 ISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYG 462

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +   +  +T ++          E+L F  QM      P++   ++LLQ C
Sbjct: 463 VAATLEHYTCMVGILGGAGLLDEALDFIRQMPY---PPDACMWATLLQAC 509


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/645 (31%), Positives = 362/645 (56%), Gaps = 46/645 (7%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            +I + +  G +  A  +F+ +     +P I  WN ++ G+  +  +Q+ L +   MQ   
Sbjct: 59   LIHASSSFGDITFARQVFDDLP----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P+  +   +L+A + L  L+ GR  H  + R G D D++V   L+ +Y K   L +A+
Sbjct: 115  VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174

Query: 588  EVFDNMK--NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--- 642
             VF+ +    R IV+W +++S Y   G  + A ++ +QM + ++KPD V+  S+++    
Sbjct: 175  TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234

Query: 643  --------------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                                            Y+  GQ   A ++   MK+    PN++ 
Sbjct: 235  LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLIL 290

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W ++ISG  +N   RE++  F +M  +D++P++ +++S +  C  +G L+  + ++    
Sbjct: 291  WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            ++ +  D ++++ LIDM++K G+++ AR VF ++ ++ +  W+ MI+G+ ++G  +EAI 
Sbjct: 351  RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            L+  +   G  P+ +TF  LL AC +SG+V EGW +F+ M+ D+ I P  +HY+C++DLL
Sbjct: 411  LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLL 469

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG+LD+A++ I+ MP +P  T+WGALL +C+ H H+E  E A+++LF ++P N+ +Y 
Sbjct: 470  GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
             + NL A +  W+ V  +R  M E G+   +  SW+++   +  F      HP   EI  
Sbjct: 530  QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 589

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            ++  + S +K+ G+V +      D+++EE  + L SH+E++AI YGL+ T    P+R+ K
Sbjct: 590  QVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITK 649

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R C +CH A K +S +  REI +RD  RFHHF++G CSC D W
Sbjct: 650  NLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 229/528 (43%), Gaps = 74/528 (14%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
           + +K  HA+++ +G +  S  ++  LI     FGD T A + F          W++ +  
Sbjct: 35  AQLKQIHARLLVLG-LQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           Y S     Q+ L ++  +    V   S     +LK C+ L    +G  VHA + + GFD 
Sbjct: 94  Y-SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFRE 386
           DV ++  L+  Y KCR + SA  +F  +   E  ++ W  I+    +N +   A+++F +
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+    K     +V +L A   +    +G+ IH  V+K  LE    +   L +MY++  +
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +  A  +FD MK  NL  WN+MIS Y   GY   A  +F++M +  ++PD I        
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI-------- 324

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                                      S++  + A  ++  L+  R  + Y+ R+    D
Sbjct: 325 ---------------------------SITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           +++ ++L+DM+ K   ++ A+ VFD   +R++V W+++I GY   G              
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG-------------- 403

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                                +++EA+ +   M+  G++PN VT+  L+     +   RE
Sbjct: 404 ---------------------RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNG 733
              FF +M    I P     + ++   G  G L    E I C+ ++ G
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65570-like
            [Glycine max]
          Length = 676

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/647 (35%), Positives = 355/647 (54%), Gaps = 46/647 (7%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            + +I  Y   G +  A  LF+++ S  I    +TWN ++S H +HG  +  +     M  
Sbjct: 39   HKLIDGYIKCGSLAEARKLFDELPSRHI----VTWNSMISSHISHGKSKEAVEFYGNMLM 94

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQ 584
             G  P+  + S + +A ++L L+++G+ +HG  +  GL+  D +V ++L+DMY K D ++
Sbjct: 95   EGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMR 154

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------- 631
            +A  VF  +  +++V + +LI GY   GL   A K+   M    +KP             
Sbjct: 155  DAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCG 214

Query: 632  ---DLV-------------------SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
               DLV                   S  SL++ YS     ++++ + + +     Y N V
Sbjct: 215  NLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLD----YANQV 270

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            TWTS + G +QN     ++  F +M +  I PN  T+SS+LQ C  L +L+ G++IH + 
Sbjct: 271  TWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAIT 330

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            +K G   + Y    LI++Y K GN+  AR VF       + + N MI  +A  G G EA+
Sbjct: 331  MKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEAL 390

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             LF  L   G  P+ +TF ++L AC N+GLVEEG + F S+  ++NI  TI+H++CM+DL
Sbjct: 391  ELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDL 450

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            LG++  L+EA   I  +   PD  +W  LL SC+IHG +E AE    ++ +L P +   +
Sbjct: 451  LGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTH 509

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ NL A + +W  V  ++ ++ ++ +K     SW+ +D+ VH F A    HP + EI+
Sbjct: 510  ILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIF 569

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR-APIRV 1028
              L+ L+ ++K LGY P+TR V QD+DEE+K   L  H+EKLAI Y L KT  R   IR+
Sbjct: 570  EMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRI 629

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KN RVC DCH+  K++SL+ GR+I  RD  RFHHF+ G CSC D W
Sbjct: 630  FKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/400 (22%), Positives = 181/400 (45%), Gaps = 40/400 (10%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  +L+  Y +F     A   F     +    +++ +  Y   G +  E L+++ ++  +
Sbjct: 139 VASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLD-GEALKIFEDMVNR 197

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           GV      L  IL  C  L     G  +H  ++K G +  V  + +L+  Y +C  +E +
Sbjct: 198 GVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDS 257

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            K+F+++ D  + + W   ++  ++N + E A+ +FREM   S      T+  +LQAC+ 
Sbjct: 258 IKVFNQL-DYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSS 316

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +     G+QIH   +K  L+ N      LI++Y +   ++ A  VFD + + ++ + NSM
Sbjct: 317 LAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSM 376

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           I +Y   G+   A  LF +                                   ++++G 
Sbjct: 377 IYAYAQNGFGHEALELFER-----------------------------------LKNMGL 401

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG--TSLMDMYVKNDCLQNA 586
            PNG +   +L A     L++ G +    I RN  + +L +   T ++D+  ++  L+ A
Sbjct: 402 VPNGVTFISILLACNNAGLVEEGCQIFASI-RNNHNIELTIDHFTCMIDLLGRSRRLEEA 460

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
             + + ++N ++V W +L++     G    A+K+++++ E
Sbjct: 461 AMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILE 500



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 103/467 (22%), Positives = 198/467 (42%), Gaps = 76/467 (16%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VH ++IK GF +   L   L++ Y KC  +  A KLF E+      + WN +I   + + 
Sbjct: 23  VHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELPS-RHIVTWNSMISSHISHG 80

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES-NLSVC 434
           K + A++ +  M        + T   + +A +++G    G++ HG  +   LE  +  V 
Sbjct: 81  KSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVA 140

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           + L+ MY++ +K+  A  VF  + + ++  + ++I  Y   G    A  +F  M +  ++
Sbjct: 141 SALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVK 200

Query: 495 PDIITWNCLL----------SGHFTHG--------------------------------- 511
           P+  T  C+L          +G   HG                                 
Sbjct: 201 PNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKV 260

Query: 512 ----SYQNVLT-------------------LLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                Y N +T                   + R M      PN  ++S +LQA + L +L
Sbjct: 261 FNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAML 320

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
           + G + H   ++ GLD + Y G +L+++Y K   +  A+ VFD +   ++VA NS+I  Y
Sbjct: 321 EVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAY 380

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPN 667
              G    A ++  +++   + P+ V++ S++   +  G  +E   I   ++N+  I   
Sbjct: 381 AQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELT 440

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIK-PNSTTMSSLLQTC 713
           +  +T +I    ++    E+      M  E+++ P+     +LL +C
Sbjct: 441 IDHFTCMIDLLGRSRRLEEA-----AMLIEEVRNPDVVLWRTLLNSC 482


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 249/838 (29%), Positives = 412/838 (49%), Gaps = 78/838 (9%)

Query: 233  LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG-GEVQELLEVWGELHGKGVI 291
            LI  Y + G    A + F    +R    W + L  Y   G GE  E L ++ ++H  GV+
Sbjct: 83   LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE--EALGLYRQMHRAGVV 140

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +L+ +L  CTK   F  G  +HA   K GF  ++ +  A++  Y +C     A ++
Sbjct: 141  PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F ++    D + +N +I    +    E+A+++F EMQFS       TI  +L ACA +G 
Sbjct: 201  FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              +G Q+H Y+ K+ + S+  +   L+ +Y +                            
Sbjct: 260  LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK---------------------------- 291

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                G V+ A  +FN  + +    +++ WN +L              L   MQ+ G RPN
Sbjct: 292  ---CGDVETALVIFNSSDRT----NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L+  T  R +  G + H   ++ G + D+YV   L+DMY K   L+ A+ V +
Sbjct: 345  QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS---------------- 635
             +K +++V+W S+I+GY       +A     +M++  I PD +                 
Sbjct: 405  MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 636  -------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                               WN+LV+ Y+  G+ +EA      ++    + + +TW  L+S
Sbjct: 465  GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE----HKDEITWNGLVS 520

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G  Q+  + E+LK F++M Q  +K N  T  S L     L  ++ GK+IH   +K G   
Sbjct: 521  GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            +  V   LI +Y K G+ + A+  F + + +   SWN +I   + +G G EA+ LF ++ 
Sbjct: 581  ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
            + G +P+ +TF  +LAAC + GLVEEG  YF SMS +Y I P  +HY+C++D+ G+AG L
Sbjct: 641  KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
            D A  FI  MP   DA +W  LL +C++H ++E  E A++ L +LEP +SA+Y L+ N  
Sbjct: 701  DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A++ +W + +++R  M + GV+     SWI++  +VH F      HP   +IY  L  + 
Sbjct: 761  AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
              + K+GY  +   ++ D ++E +    L H+EKLA+ +GLM      P+RVIKN RV
Sbjct: 821  DRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 217/503 (43%), Gaps = 86/503 (17%)

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IH   +   L     V N LI +YS+N  +  A RVF+ +   +  SW +M+S Y   G
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  L+ +M+ +                                   G  P    +S
Sbjct: 123 LGEEALGLYRQMHRA-----------------------------------GVVPTPYVLS 147

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL + T+  L   GR  H    ++G   +++VG +++ +Y++    + A+ VF +M +R
Sbjct: 148 SVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------------- 642
           + V +N+LISG+   G   +A ++  +M+   + PD V+ +SL++               
Sbjct: 208 DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLH 267

Query: 643 ---------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                                Y   G  + ALVI     NS    NVV W  ++    Q 
Sbjct: 268 SYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF----NSSDRTNVVLWNLMLVAFGQI 323

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
            +  +S + F QMQ   I+PN  T   +L+TC     +  G++IH L +K GF  D YV+
Sbjct: 324 NDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVS 383

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             LIDMYSK G L+ AR V      K + SW  MI G+  +   K+A+  F E+ + G  
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW 443

Query: 802 PDAITFTALLAACKNSGLVEEGWK-----YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
           PD I   + ++ C     + +G +     Y    S D +I      ++ +V+L  + G +
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALVNLYARCGRI 497

Query: 857 DEAWDFIRTMPFKPDATIWGALL 879
            EA+     +  K D   W  L+
Sbjct: 498 REAFSSFEEIEHK-DEITWNGLV 519



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 161/359 (44%), Gaps = 33/359 (9%)

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           E H   +  GL     VG  L+D+Y KN  +  A+ VF+ +  R+ V+W +++SGY   G
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQSKE----------A 652
           L   A  +  QM    + P     +S++S          G  I  Q  +           
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 653 LVIIHHMKNSGI-----------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            VI  +++               + + VT+ +LISG  Q  +   +L+ F +MQ   + P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +  T+SSLL  C  LG LQ G ++H    K G   D  +   L+D+Y K G++++A  +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             S    +  WN M++ F    +  ++  LF ++   G +P+  T+  +L  C  +  ++
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            G +   S+S        +     ++D+  K G+L++A   +  +  K D   W +++ 
Sbjct: 363 LG-EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTSMIA 419



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 3/218 (1%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL-QNGKEIHCLCLKNG 733
           ++G L +E+  + L  F    ++         +  L+ C G G   Q   EIH   +  G
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
             K   V   LID+YSK+G +  AR VF + + +   SW  M+ G+A  G G+EA+ L+ 
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
           ++   G  P     +++L++C  + L  +G +   +    +     I   + ++ L  + 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           G    A      MP + D   +  L+      GH E+A
Sbjct: 192 GSFRLAERVFCDMPHR-DTVTFNTLISGHAQCGHGEHA 228


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/629 (34%), Positives = 349/629 (55%), Gaps = 51/629 (8%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            +  + +WN +++     G     L     M+ L   PN S+    +++ + L  L  G++
Sbjct: 48   KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC---- 609
             H      G   D++V ++L+DMY K   L +A+++FD +  RN+V+W S+ISGY     
Sbjct: 108  IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNER 167

Query: 610  -------FKGLFVNAKKMLNQMEEEEIKPD------------------------------ 632
                   FK   +  +   +++    +  D                              
Sbjct: 168  AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKK 227

Query: 633  -----LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                 L   N+L+  Y+  G+   +  +   M+ +    +V +W SLI+   QN    E+
Sbjct: 228  GFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEET----DVCSWNSLIAVYAQNGLSVEA 283

Query: 688  LKFFIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
               F  M ++ +++ N+ T+S++L  C   G LQ GK IH   +K     +  V T ++D
Sbjct: 284  FSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVD 343

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY K G ++ AR+ F +   K + SW  M+ G+ ++G+GKEA+ +F+E++  G +P+ IT
Sbjct: 344  MYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYIT 403

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F ++LAAC ++GL++EGW +F+ M  ++++ P IEHYSCMVDLLG+AGYL EA+  I+ M
Sbjct: 404  FVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM 463

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              KPD  +WG+LLG+CRIH ++E  EI++R+LFKL+P N   Y L+ N+ A + RW+DVE
Sbjct: 464  KVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVE 523

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            R+R  M   G+     +S ++    VHVF      HP   +IY  L  L  +++++GY+P
Sbjct: 524  RMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMP 583

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            +   V  D+D EEKG VL  H+EKLA+ +G+M +   + I++IKN R+C DCH A K +S
Sbjct: 584  NVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLIS 643

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +  REI +RD  RFHHF++G CSC D W
Sbjct: 644  KIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/470 (22%), Positives = 204/470 (43%), Gaps = 53/470 (11%)

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           S   W+S + D+   G  +Q L   +  +    +          +K C+ L     G ++
Sbjct: 50  SVYSWNSIIADFARSGDSLQALY-AFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQI 108

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H      G+  D+ +  AL++ Y KC  +  A KLF E+ +  + + W  +I   ++NE+
Sbjct: 109 HQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPE-RNVVSWTSMISGYVQNER 167

Query: 377 WENAIKLFRE-----------MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
              A+ LF+E           +        S  +  ++ ACA+V      + +HG  +K 
Sbjct: 168 AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKK 227

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
             E  L+V N L+  Y++                                G + V+  +F
Sbjct: 228 GFEGCLAVGNTLMDAYAK-------------------------------CGEISVSRKVF 256

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTE 544
           + M     + D+ +WN L++ +  +G      +L   M   G  R N  ++S VL A   
Sbjct: 257 DGME----ETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAH 312

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
              L+ G+  H  +++  L+ +L VGTS++DMY K   ++ A++ FD +K +N+ +W  +
Sbjct: 313 SGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVM 372

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-G 663
           ++GY   G    A K+  +M    IKP+ +++ S+++  S  G  KE     + MK    
Sbjct: 373 VAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFD 432

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + P +  ++ ++    +    +E+      +Q+  +KP+     SLL  C
Sbjct: 433 VEPGIEHYSCMVDLLGRAGYLKEAYGL---IQEMKVKPDFIVWGSLLGAC 479



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 203/520 (39%), Gaps = 119/520 (22%)

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F +  D      WN II    R+     A+  F  M+  S      T    +++C+ + 
Sbjct: 41  MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
               GKQIH         S++ V + LI MYS+   L  A ++FD + + N+ SW SMIS
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMIS 160

Query: 471 SYTGLGYVDVAWSLF-----------NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            Y        A  LF           +++    +  D +   C++S              
Sbjct: 161 GYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVIS-------------- 206

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
                        +   V +++VTE          HG  ++ G +  L VG +LMD Y K
Sbjct: 207 -------------ACARVCVKSVTEC--------VHGLAVKKGFEGCLAVGNTLMDAYAK 245

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA---------------------- 617
              +  +++VFD M+  ++ +WNSLI+ Y   GL V A                      
Sbjct: 246 CGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSA 305

Query: 618 --------------KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
                         K + +Q+ + E++ +LV   S+V  Y   G+ + A      +K   
Sbjct: 306 VLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKR-- 363

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              NV +WT +++G   + + +E++K F +M +  IKPN  T  S+L  C   GLL+ G 
Sbjct: 364 --KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG- 420

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
                                   +     +K   +V        +  ++CM+      G
Sbjct: 421 ------------------------WHWFNKMKCEFDV-----EPGIEHYSCMVDLLGRAG 451

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
             KEA  L  E+     +PD I + +LL AC+    VE G
Sbjct: 452 YLKEAYGLIQEM---KVKPDFIVWGSLLGACRIHKNVELG 488



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 15/323 (4%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYF 254
           C +   +    L + K  H Q    G  + SD  V S LI  Y + G    A K F    
Sbjct: 91  CTIKSCSSLYDLCAGKQIHQQAFVFG--YGSDIFVASALIDMYSKCGYLNDARKLFDEIP 148

Query: 255 SRSYADWSSFLEDY---ESFGGEV---QELLEV----WGELHGKGVIFRSRILTIILKLC 304
            R+   W+S +  Y   E     V   +E L V    + E+ G GV   S +L  ++  C
Sbjct: 149 ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC 208

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
            ++    +   VH   +K+GF+  + +   LM+ Y KC ++  + K+F  + +  D   W
Sbjct: 209 ARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEE-TDVCSW 267

Query: 365 NEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           N +I V  +N     A  LF +M +    +  + T+  +L ACA  GA   GK IH  V+
Sbjct: 268 NSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVV 327

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           K  LE NL V   ++ MY +  ++E+A + FD +K  N+ SW  M++ Y   G+   A  
Sbjct: 328 KMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMK 387

Query: 484 LFNKMNSSRIQPDIITWNCLLSG 506
           +F +M    I+P+ IT+  +L+ 
Sbjct: 388 VFYEMIRCGIKPNYITFVSVLAA 410



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 36/280 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG-V 290
           +L+  Y + G+ + + K F          W+S +  Y   G  V E   ++ ++  +G V
Sbjct: 238 TLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSV-EAFSLFSDMVKRGEV 296

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
            + +  L+ +L  C    A  +G  +H  ++K   + ++ +  ++++ Y KC  VE A K
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
            F  +   ++   W  ++     +   + A+K+F EM     K    T V +L AC+  G
Sbjct: 357 AFDRLKR-KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAG 415

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
              EG                         +   NK++    V     +  +  ++ M+ 
Sbjct: 416 LLKEG-------------------------WHWFNKMKCEFDV-----EPGIEHYSCMVD 445

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
                GY+  A+ L  +M   +++PD I W  LL     H
Sbjct: 446 LLGRAGYLKEAYGLIQEM---KVKPDFIVWGSLLGACRIH 482



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 758 REVFRKSANKT-LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           R +F K  +KT + SWN +I  FA  G+  +A+  F  + +    P+  TF   + +C +
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 817 SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
              +  G K     +  +     I   S ++D+  K GYL++A      +P + +   W 
Sbjct: 99  LYDLCAG-KQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP-ERNVVSWT 156

Query: 877 ALL 879
           +++
Sbjct: 157 SMI 159


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 1176

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 249/838 (29%), Positives = 412/838 (49%), Gaps = 78/838 (9%)

Query: 233  LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG-GEVQELLEVWGELHGKGVI 291
            LI  Y + G    A + F    +R    W + L  Y   G GE  E L ++ ++H  GV+
Sbjct: 83   LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE--EALGLYRQMHRAGVV 140

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +L+ +L  CTK   F  G  +HA   K GF  ++ +  A++  Y +C     A ++
Sbjct: 141  PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F ++    D + +N +I    +    E+A+++F EMQFS       TI  +L ACA +G 
Sbjct: 201  FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              +G Q+H Y+ K+ + S+  +   L+ +Y +                            
Sbjct: 260  LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK---------------------------- 291

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                G V+ A  +FN  + +    +++ WN +L              L   MQ+ G RPN
Sbjct: 292  ---CGDVETALVIFNSSDRT----NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L+  T  R +  G + H   ++ G + D+YV   L+DMY K   L+ A+ V +
Sbjct: 345  QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS---------------- 635
             +K +++V+W S+I+GY       +A     +M++  I PD +                 
Sbjct: 405  MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 636  -------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                               WN+LV+ Y+  G+ +EA      ++    + + +TW  L+S
Sbjct: 465  GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE----HKDEITWNGLVS 520

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G  Q+  + E+LK F++M Q  +K N  T  S L     L  ++ GK+IH   +K G   
Sbjct: 521  GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            +  V   LI +Y K G+ + A+  F + + +   SWN +I   + +G G EA+ LF ++ 
Sbjct: 581  ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
            + G +P+ +TF  +LAAC + GLVEEG  YF SMS +Y I P  +HY+C++D+ G+AG L
Sbjct: 641  KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
            D A  FI  MP   DA +W  LL +C++H ++E  E A++ L +LEP +SA+Y L+ N  
Sbjct: 701  DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A++ +W + +++R  M + GV+     SWI++  +VH F      HP   +IY  L  + 
Sbjct: 761  AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
              + K+GY  +   ++ D ++E +    L H+EKLA+ +GLM      P+RVIKN RV
Sbjct: 821  DRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 217/503 (43%), Gaps = 86/503 (17%)

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IH   +   L     V N LI +YS+N  +  A RVF+ +   +  SW +M+S Y   G
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  L+ +M+ +                                   G  P    +S
Sbjct: 123 LGEEALGLYRQMHRA-----------------------------------GVVPTPYVLS 147

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL + T+  L   GR  H    ++G   +++VG +++ +Y++    + A+ VF +M +R
Sbjct: 148 SVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------------- 642
           + V +N+LISG+   G   +A ++  +M+   + PD V+ +SL++               
Sbjct: 208 DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLH 267

Query: 643 ---------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                                Y   G  + ALVI     NS    NVV W  ++    Q 
Sbjct: 268 SYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF----NSSDRTNVVLWNLMLVAFGQI 323

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
            +  +S + F QMQ   I+PN  T   +L+TC     +  G++IH L +K GF  D YV+
Sbjct: 324 NDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVS 383

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             LIDMYSK G L+ AR V      K + SW  MI G+  +   K+A+  F E+ + G  
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW 443

Query: 802 PDAITFTALLAACKNSGLVEEGWK-----YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
           PD I   + ++ C     + +G +     Y    S D +I      ++ +V+L  + G +
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALVNLYARCGRI 497

Query: 857 DEAWDFIRTMPFKPDATIWGALL 879
            EA+     +  K D   W  L+
Sbjct: 498 REAFSSFEEIEHK-DEITWNGLV 519



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 161/359 (44%), Gaps = 33/359 (9%)

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           E H   +  GL     VG  L+D+Y KN  +  A+ VF+ +  R+ V+W +++SGY   G
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQSKE----------A 652
           L   A  +  QM    + P     +S++S          G  I  Q  +           
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 653 LVIIHHMKNSGI-----------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            VI  +++               + + VT+ +LISG  Q  +   +L+ F +MQ   + P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +  T+SSLL  C  LG LQ G ++H    K G   D  +   L+D+Y K G++++A  +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             S    +  WN M++ F    +  ++  LF ++   G +P+  T+  +L  C  +  ++
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            G +   S+S        +     ++D+  K G+L++A   +  +  K D   W +++ 
Sbjct: 363 LG-EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTSMIA 419



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 3/218 (1%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL-QNGKEIHCLCLKNG 733
           ++G L +E+  + L  F    ++         +  L+ C G G   Q   EIH   +  G
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
             K   V   LID+YSK+G +  AR VF + + +   SW  M+ G+A  G G+EA+ L+ 
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
           ++   G  P     +++L++C  + L  +G +   +    +     I   + ++ L  + 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           G    A      MP + D   +  L+      GH E+A
Sbjct: 192 GSFRLAERVFCDMPHR-DTVTFNTLISGHAQCGHGEHA 228


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/672 (34%), Positives = 353/672 (52%), Gaps = 52/672 (7%)

Query: 411  AFHEGKQIHGYVLKSALESNLSVCNCLISMYS-----RNNKLELATRVFDSMKDHNLSSW 465
            + H  KQ H  +L++    +  +   L+  Y+     R    E + RVFD ++       
Sbjct: 47   SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR------- 99

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
                                        +P++  WNC++     +      + L   M  
Sbjct: 100  ----------------------------KPNVFLWNCMIKVCIENNEPFKAILLYYEMVV 131

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
               RPN  +   VL+A ++  ++  G + H +++++GL  D ++ +S + MY     L  
Sbjct: 132  AHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 191

Query: 586  AQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            A+ + D+     + V WN++I GY   G    A+++   M +  +   + +WN+++SG+S
Sbjct: 192  ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM---ISTWNAMISGFS 248

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G  + A      MK      + ++W+++I G +Q   + E+L+ F QMQ+E I+P   
Sbjct: 249  RCGMVEVAREFFDEMKER----DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKF 304

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
             + S+L  C  LG L  G+ IH    +N    D  + T L+DMY+K G +  A EVF K 
Sbjct: 305  VLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 364

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
            +NK ++SWN MI G A++G  ++AI LF ++      P+ ITF  +L AC + GLV++G 
Sbjct: 365  SNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGL 421

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
              F+SM  +Y + P IEHY C+VDLLG+AG L EA   + ++P +P   +WGALLG+CR 
Sbjct: 422  TIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRK 481

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            HG++E  E   + L +LEP NS  Y L+ N+ A + RWE+V  +R  M E G+K+    S
Sbjct: 482  HGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 541

Query: 945  WIQIDQ-IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
             I + +  VH F      HP   +IY  L  +   ++  GY PD   V  DIDEEEK   
Sbjct: 542  IIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETA 601

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            +  H+EKLAI +GL+ T     IR++KN RVC DCH+A K +S V  REI +RD  R+HH
Sbjct: 602  VWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHH 661

Query: 1064 FREGECSCNDCW 1075
            FR G CSC D W
Sbjct: 662  FRNGACSCKDFW 673



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 225/485 (46%), Gaps = 51/485 (10%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCR-----DVESANKLFSEVSDLEDDLLWNEIIM 369
           + HA +++ G   D ++  +L+  Y           ES+ ++F  V    +  LWN +I 
Sbjct: 53  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRK-PNVFLWNCMIK 111

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH---------- 419
           V + N +   AI L+ EM  + ++    T   +L+AC+  G   EG Q+H          
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171

Query: 420 -GYVLKSALESNLS--------------------VC-NCLISMYSRNNKLELATRVFDSM 457
            G++L SA+    S                    VC N +I  Y R  ++E A  +F+ M
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231

Query: 458 KDHNL-SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            D ++ S+WN+MIS ++  G V+VA   F++M     + D I+W+ ++ G+   G +   
Sbjct: 232 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMK----ERDEISWSAMIDGYIQEGCFMEA 287

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           L +   MQ    RP    +  VL A   L  L  GR  H Y  RN +  D  +GTSL+DM
Sbjct: 288 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 347

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
           Y K   +  A EVF+ M N+ + +WN++I G    G   +A  + ++M   +I P+ +++
Sbjct: 348 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITF 404

Query: 637 NSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
             +++  +  G  ++ L I + M K  G+ P +  +  ++    +     E+ K    + 
Sbjct: 405 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 464

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
            E   P      +LL  C   G ++ G+ +  + L+    +++   T L ++Y+K+G  +
Sbjct: 465 TE---PTPAVWGALLGACRKHGNVELGERVGKILLELE-PQNSGRYTLLSNIYAKAGRWE 520

Query: 756 SAREV 760
              EV
Sbjct: 521 EVGEV 525



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 8/242 (3%)

Query: 243 FTSAAKAFFLYF-SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIIL 301
               A+ FF     R    WS+ ++ Y   G    E LE++ ++  + +  R  +L  +L
Sbjct: 252 MVEVAREFFDEMKERDEISWSAMIDGYIQEGC-FMEALEIFHQMQKEKIRPRKFVLPSVL 310

Query: 302 KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
             C  L A   G  +H    +     D  L  +L++ Y KC  ++ A ++F ++S+ E  
Sbjct: 311 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 370

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
             WN +I     + + E+AI LF +M     +    T V +L ACA  G   +G  I   
Sbjct: 371 -SWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEI---TFVGVLNACAHGGLVQKGLTIFNS 426

Query: 422 VLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVD 479
           + K   +E  +    C++ +  R   L  A +V  S+  +   + W +++ +    G V+
Sbjct: 427 MRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVE 486

Query: 480 VA 481
           + 
Sbjct: 487 LG 488


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/719 (33%), Positives = 380/719 (52%), Gaps = 47/719 (6%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            ++  ++L++C        GK +H   LKS + S+  + N  I +YS+ N L  A   F+ 
Sbjct: 9    QSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQ 68

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
              + N+ S+N++I++Y     + VA  LF+++     QPD++++N L++ +   G   + 
Sbjct: 69   THEPNVFSFNALIAAYAKESLIHVAHHLFDQIP----QPDLVSFNTLINAYADRGDTLSA 124

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAV-TELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            L+L   M+ +G   +G + S V+ A    + L+   R+ H     +G D  + V  SL+ 
Sbjct: 125  LSLFGEMREMGLVMDGFTFSGVITACCNHVGLI---RQLHSLAFSSGFDSYVSVKNSLLT 181

Query: 576  MYVKNDCLQNAQEVFDNMKN--RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
             Y KN  L+ A+ VF+ M    R+ V+WNS+I  Y      + A  +   M     + D+
Sbjct: 182  YYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM 241

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN-------------------------- 667
             +  S+++ +S        L        +G   N                          
Sbjct: 242  FTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFE 301

Query: 668  ------VVTWTSLISGSLQNENYR-ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                  +V W ++ISG  QN+    E+L+ F QMQ+    P+  +    +  C  L    
Sbjct: 302  EICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPS 361

Query: 721  NGKEIHCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             GK+ H L +K+    +   V   L+ MYSK GNL+ AR++F++       + N +I G+
Sbjct: 362  QGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGY 421

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A +G G E++ LF ++L     P +IT  ++L+AC ++G VEEG KYF+ M   + I P 
Sbjct: 422  AQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPE 481

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
             EHYSCM+DLLG+AG L EA   I TMPF P +  W ALLG+CR +G++E AE A+ +  
Sbjct: 482  AEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFL 541

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +LEP N+  Y ++ ++ + + +WE+  R+R  M + G++     SWI++++ VHVF AE 
Sbjct: 542  QLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAED 601

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID---EEEKGKVLLSHTEKLAIVYG 1016
              HP   EI+  L  +  +MK+ GYVPD R  +   D   E+EK  +L  H+EKLA+ +G
Sbjct: 602  NSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFG 661

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+ TK   P+ V+KN R+C DCH A K+MS +  R+I +RD  RFH F +G CSC D W
Sbjct: 662  LLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 134/560 (23%), Positives = 218/560 (38%), Gaps = 119/560 (21%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD-- 357
           ILK C        G  +H   +K       +L    +  Y KC  + +A+  F++  +  
Sbjct: 14  ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPN 73

Query: 358 ---------------------------LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQF 389
                                       + DL+ +N +I          +A+ LF EM+ 
Sbjct: 74  VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE 133

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEG--KQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                   T   ++ AC      H G  +Q+H     S  +S +SV N L++ YS+N  L
Sbjct: 134 MGLVMDGFTFSGVITACCN----HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGIL 189

Query: 448 ELATRVFDSMKD--HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
           E A  VF+ M +   +  SWNSMI +Y                                 
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYG-------------------------------- 217

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
               H      L L R M   GF  +  +++ VL   + +  L  G + H   ++ G + 
Sbjct: 218 ---QHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNK 274

Query: 566 DLYVGTSLMDMYVKNDC-LQNAQEVFDNMKNRNIVAWNSLISGYCF-KGLFVNAKKMLNQ 623
           + +VG+ L+DMY K    +  +++VF+ +   ++V WN++ISGY   K L V A +   Q
Sbjct: 275 NRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQ 334

Query: 624 MEEEEIKPDLVSW------------------------------------NSLVSGYSIWG 647
           M+     PD  S+                                    N+LV+ YS  G
Sbjct: 335 MQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCG 394

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             ++A  +   M       N VT  S+I+G  Q+    ESL  F QM    I P S T+ 
Sbjct: 395 NLQDARKLFQRMPQH----NTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLV 450

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKN--GFIKDAYVATGLIDMYSKSGNLKSA-REVFRKS 764
           S+L  C   G ++ GK+   + +K+  G   +A   + +ID+  ++G L  A R +    
Sbjct: 451 SILSACAHTGRVEEGKKYFNM-MKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMP 509

Query: 765 ANKTLASWNCMIMGFAIYGN 784
            +   A+W  ++     YGN
Sbjct: 510 FSPGSAAWAALLGACRKYGN 529



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 196/452 (43%), Gaps = 43/452 (9%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+    L ++GE+   G++      + ++  C   +   L  ++H+     GFD  V +K
Sbjct: 119 GDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVG--LIRQLHSLAFSSGFDSYVSVK 176

Query: 333 CALMNFYGKCRDVESANKLFSEVSD-LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
            +L+ +Y K   +E A  +F+ + + + D++ WN +I+   ++++   A+ L+R+M    
Sbjct: 177 NSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRG 236

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +    T+  +L   + V     G Q H   +K+    N  V + LI MY++        
Sbjct: 237 FEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAK-------- 288

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
                                 G G  + +  +F ++  S    D++ WN ++SG+  + 
Sbjct: 289 ---------------------CGAGMSE-SRKVFEEICGS----DLVVWNTMISGYSQNK 322

Query: 512 SYQ-NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD-LYV 569
                 L   R MQ  G+ P+  S    + A + L     G++ H   +++ +  + + V
Sbjct: 323 ELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISV 382

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             +L+ MY K   LQ+A+++F  M   N V  NS+I+GY   G+   +  +  QM    I
Sbjct: 383 NNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASI 442

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
            P  ++  S++S  +  G+ +E     + MK+  GI P    ++ +I    +     E+ 
Sbjct: 443 APTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAE 502

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
           +    M      P S   ++LL  C   G ++
Sbjct: 503 RLIDTM---PFSPGSAAWAALLGACRKYGNME 531


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/629 (35%), Positives = 332/629 (52%), Gaps = 47/629 (7%)

Query: 447  LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            L++   +F    DH+      +  SY  LG +D + +LF +  +    P +  W  ++ G
Sbjct: 47   LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQN----PSVFFWTAIIHG 102

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            H   G ++  L     M + G  PN  + S +L+    L  ++ G+  H   ++ G D D
Sbjct: 103  HALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK----LCPIEPGKALHSQAVKLGFDSD 158

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            LYV T L+D+Y +   + +AQ++FD M  +++V+  ++++ Y   G    A+ + + MEE
Sbjct: 159  LYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEE 218

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                                                    + V W  +I G  QN    E
Sbjct: 219  R---------------------------------------DGVCWNVMIDGYTQNGMPNE 239

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +L  F +M +   KPN  T+ S+L  CG LG L++G+ +H     NG   + +V T L+D
Sbjct: 240  ALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVD 299

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MYSK G+L+ AR VF K  +K + +WN MI+G+A++G  +EA+ LF  +   G  P  IT
Sbjct: 300  MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNIT 359

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F  +L+AC +SG V EGW  F+ M  +Y I P IEHY CMV+LLG+AG++++A++ ++ M
Sbjct: 360  FIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM 419

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              +PD  +WG LLG+CR+HG +   E     L      NS  Y L+ N+ A    W+ V 
Sbjct: 420  NIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVA 479

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            RLR  M + GVK     S I+++  VH F A G  HP   EIY  L  +   +K  GY P
Sbjct: 480  RLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTP 539

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
             T  V  DI E EK + L  H+EKLAI +GL+ T+    I+++KN RVC+DCH   K +S
Sbjct: 540  QTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLIS 599

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             + GR+I +RD  RFHHF  G CSC D W
Sbjct: 600  KITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 196/413 (47%), Gaps = 13/413 (3%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           +++HA L + G D    L   L   Y     ++ +  LF    +      W  II     
Sbjct: 47  LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQN-PSVFFWTAIIHGHAL 105

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
               E A+  + +M     +  + T   +L+ C        GK +H   +K   +S+L V
Sbjct: 106 RGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYV 161

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              L+ +Y+R   +  A ++FD+M + +L S  +M++ Y   G +D A  LF+ M     
Sbjct: 162 RTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGME---- 217

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           + D + WN ++ G+  +G     L L R M     +PN  +V  VL A  +L  L+ GR 
Sbjct: 218 ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRW 277

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H YI  NG+ ++++VGT+L+DMY K   L++A+ VFD + ++++VAWNS+I GY   G 
Sbjct: 278 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGF 337

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A ++   M    + P  +++  ++S     G   E   I + MK+  GI P +  + 
Sbjct: 338 SQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYG 397

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            +++   +  +  ++ +    M   +I+P+     +LL  C   G +  G++I
Sbjct: 398 CMVNLLGRAGHVEQAYELVKNM---NIEPDPVLWGTLLGACRLHGKIALGEKI 447



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 37/279 (13%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  + +  G  ++ L  + ++  +GV   +   + ILKLC        G  +H+  
Sbjct: 96  WTAIIHGH-ALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQA 150

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL---------------------- 358
           +K GFD D++++  L++ Y +  DV SA +LF  + +                       
Sbjct: 151 VKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 210

Query: 359 --------EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
                    D + WN +I    +N     A+ LFR M  + AK    T++ +L AC ++G
Sbjct: 211 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 270

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A   G+ +H Y+  + ++ N+ V   L+ MYS+   LE A  VFD + D ++ +WNSMI 
Sbjct: 271 ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 330

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS--GH 507
            Y   G+   A  LF  M    + P  IT+  +LS  GH
Sbjct: 331 GYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGH 369



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 45/280 (16%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G+  +A   F     R    W+  ++ Y   G   + L+     L  K       +
Sbjct: 200 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 259

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L++ L  C +L A   G  VH+ +   G  F+VH+  AL++ Y KC  +E A  +F ++ 
Sbjct: 260 LSV-LSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 318

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D +D + WN +I+    +   + A++LF+ M        + T + +L AC   G   EG 
Sbjct: 319 D-KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 377

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH-----NLSSWNSMISS 471
            I                                   F+ MKD       +  +  M++ 
Sbjct: 378 DI-----------------------------------FNKMKDEYGIEPKIEHYGCMVNL 402

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
               G+V+ A+ L   MN   I+PD + W  LL     HG
Sbjct: 403 LGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGACRLHG 439


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/684 (34%), Positives = 375/684 (54%), Gaps = 57/684 (8%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC-----NCLISMYSRNNKLELATRVF 454
            + +L  C  +  F   KQIH  VLK  LES+  +      +C IS+   ++ L+ A R+F
Sbjct: 9    LSLLNICKSLTTF---KQIHANVLKLGLESDPFIAGKLLHHCAISL---SDSLDYACRLF 62

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
                             YT                     PD+   N L+ G +     Q
Sbjct: 63   ----------------RYTP-------------------NPDVFMHNTLIRGLYESDRPQ 87

Query: 515  NVLTLLRGMQSLGFRPNGS-SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            + L     M+   F P  S S + +++A   LR ++ G + H   L +GLD  L+VGT+L
Sbjct: 88   DSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTL 147

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            + MY +   +  A++VFD M   N +AWN++++  C  G     +++ + M       +L
Sbjct: 148  ISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVR----NL 203

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
            +SWN +++GY+  G+ + A  +   M       + V+W+++I G   N  + E+  FF +
Sbjct: 204  MSWNVMLAGYTKAGELELAREMFLEMP----MKDDVSWSTMIVGFAHNGYFEEAFSFFRE 259

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            +Q++ ++PN T+++ +L  C   G L+ GK +H    K+G      V   L+D YSK GN
Sbjct: 260  LQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGN 319

Query: 754  LKSAREVFRKSAN-KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            +  A+ VF +  N + + SW  M+   A++G+G+EAI +FH++ E+G +PD I F +LL 
Sbjct: 320  VLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLY 379

Query: 813  ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            AC ++GLVE+G +YFD M   YNI P+IEHY CMVDL G+AG L +A++F+  MP    A
Sbjct: 380  ACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTA 439

Query: 873  TIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
             IW  LLG+C +HG ++ AE    RL +L+P NS+++ L+ N  A++ +W+D   +R SM
Sbjct: 440  IIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSM 499

Query: 933  DEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK-KLGYVPDTRCV 991
             E  +     WS I++D+I++ F A    +  T E Y +L  ++  ++ + GYVP+   V
Sbjct: 500  TEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRV 559

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              DI+EEEK   +  H+EKLA+ +G+ +      IR++KN R+C DCH   K +S +   
Sbjct: 560  LHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKV 619

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD +RFH F++G CSC D W
Sbjct: 620  EIVVRDRSRFHSFKDGYCSCRDYW 643



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 218/466 (46%), Gaps = 54/466 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF--YGKCRDVESANKLFSEVSD 357
           +L +C  L  F    ++HA+++K G + D  +   L++         ++ A +LF    +
Sbjct: 11  LLNICKSLTTF---KQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPN 67

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQ---FSSAKAISRTIVKMLQACAKVGAFHE 414
             D  + N +I     +++ ++++  F EM+   FS   + S   +  ++A A + +   
Sbjct: 68  -PDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFI--VKAAANLRSVRV 124

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS--- 471
           G Q+H   L   L+++L V   LISMY     +  A +VFD M + N  +WN+M+++   
Sbjct: 125 GIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCR 184

Query: 472 ----------------------------YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
                                       YT  G +++A  +F +M       D ++W+ +
Sbjct: 185 GGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMP----MKDDVSWSTM 240

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           + G   +G ++   +  R +Q  G RPN +S++ VL A  +   L++G+  HG+I ++GL
Sbjct: 241 IVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGL 300

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLN 622
            + + V  +L+D Y K   +  AQ VF+ + N RNIV+W S+++     G    A  + +
Sbjct: 301 AWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFH 360

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQN 681
           +MEE  I+PD +++ SL+   S  G  ++       MK    I P++  +  ++    + 
Sbjct: 361 KMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRA 420

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC---GGLGLLQNGKE 724
              +++ +F  QM    I   +    +LL  C   G + L +  KE
Sbjct: 421 GQLQKAYEFVCQMP---IPCTAIIWRTLLGACSMHGDVKLAEQVKE 463



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 134/309 (43%), Gaps = 14/309 (4%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G+   A + F     +    WS+ +  + +  G  +E    + EL  KG+      
Sbjct: 213 YTKAGELELAREMFLEMPMKDDVSWSTMIVGF-AHNGYFEEAFSFFRELQRKGMRPNETS 271

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +L  C +  A   G  +H  + K G  + V +  AL++ Y KC +V  A  +F  + 
Sbjct: 272 LTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIM 331

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  + + W  ++     +   E AI +F +M+ S  +      + +L AC+  G   +G 
Sbjct: 332 NERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGC 391

Query: 417 QIHGYVLKSA----LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS-SWNSMISS 471
           +   Y  K      +E ++    C++ +Y R  +L+ A      M     +  W +++ +
Sbjct: 392 E---YFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGA 448

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGM--QSLGF 528
            +  G V +A  +  ++  S + P+  + + LLS  +   G +++  ++ R M  Q +  
Sbjct: 449 CSMHGDVKLAEQVKERL--SELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITK 506

Query: 529 RPNGSSVSV 537
            P  S + V
Sbjct: 507 TPGWSMIEV 515


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/672 (35%), Positives = 359/672 (53%), Gaps = 79/672 (11%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F  +     +P+++ WN +  GH       + L L   M SLG  PN
Sbjct: 81   FEGLPY---AISVFKTIQ----EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ------- 584
              +   VL++  + +  K G++ HG++L+ G D DLYV TSL+ MYV+N  L+       
Sbjct: 134  SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193

Query: 585  ------------------------NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
                                    NAQ++FD +  +++V+WN++ISGY   G +  A ++
Sbjct: 194  KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253

Query: 621  LNQMEEEEIKPD------LVS----------------W-------------NSLVSGYSI 645
               M +  ++PD      +VS                W             N+L+  YS 
Sbjct: 254  FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 313

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   +     Y +V++W +LI G      Y+E+L  F +M +    PN  T
Sbjct: 314  CGELETACGLFERLP----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            M S+L  C  LG +  G+ IH    K   G    + + T LIDMY+K G++++A +VF  
Sbjct: 370  MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +K+L+SWN MI GFA++G    +  LF  + + G QPD ITF  LL+AC +SG+++ G
Sbjct: 430  ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F +M+ DY + P +EHY CM+DLLG +G   EA + I  M  +PD  IW +LL +C+
Sbjct: 490  RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG++E  E  +  L K+EP N  +Y L+ N+ A + RW +V + R  +++ G+K V   
Sbjct: 550  MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I+ID +VH F      HP   EIY  L  +   ++K G+VPDT  V Q+++EE K   
Sbjct: 610  SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGA 669

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K +S +  REI  RD  RFHH
Sbjct: 670  LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 729

Query: 1064 FREGECSCNDCW 1075
            FR+G CSCND W
Sbjct: 730  FRDGVCSCNDYW 741



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 229/507 (45%), Gaps = 84/507 (16%)

Query: 177 PPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLI-F 235
           PP D++     LS +          +  + L S++  HAQMIK+G + N++  +  LI F
Sbjct: 26  PPYDSIRNHPSLSLL----------HNCKTLQSLRIIHAQMIKIG-LHNTNYALSKLIEF 74

Query: 236 HYL--EFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFR 293
             L   F     A   F      +   W++    + +   +    L+++  +   G++  
Sbjct: 75  CILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH-ALSSDPVSALKLYVCMISLGLLPN 133

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY---GKCRD------ 344
           S     +LK C K  AF  G ++H  ++K G D D+++  +L++ Y   G+  D      
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193

Query: 345 ----------------------VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
                                 +E+A KLF E+  ++D + WN +I        ++ A++
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP-VKDVVSWNAMISGYAETGNYKEALE 252

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           LF++M  ++ +    T+V ++ ACA+ G+   G+Q+H ++      SNL + N LI +YS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +  +LE A  +F+ +   ++ SWN++I  YT +     A  LF +M  S           
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS----------- 361

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR-- 560
                                   G  PN  ++  +L A   L  +  GR  H YI +  
Sbjct: 362 ------------------------GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
            G+     + TSL+DMY K   ++ A +VF+++ ++++ +WN++I G+   G    +  +
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            ++M +  I+PD +++  L+S  S  G
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSG 484


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/779 (30%), Positives = 389/779 (49%), Gaps = 74/779 (9%)

Query: 335  LMNFYGKCRDVESANKLF-SEVSDLEDDLLWNEII--MVKLRNEKWENAIKLFREM---Q 388
            +++ Y +   + +A+ LF S    L D + W  +I         +  +A+ LFR+M    
Sbjct: 72   MLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREG 131

Query: 389  FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNNKL 447
             +  +    T++ +  A     A      +H + LK   L SN+ VCN L+  Y ++  L
Sbjct: 132  VAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLL 191

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
              A RVF  M                                      D +T+N ++ G 
Sbjct: 192  AAARRVFQEMPHR-----------------------------------DSVTYNAMMMGC 216

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
               GS+   L L   M+  G      + S VL   T +  L  GR+ HG + R     ++
Sbjct: 217  SKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNV 275

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +V  SL+D Y K DCL   +++F  M  R+ V++N +I+GY +        ++  +M+  
Sbjct: 276  FVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSL 335

Query: 628  EIKPDLVSWNSLVS----------GYSIWGQ------SKEALV------------IIHHM 659
                  + + SL+S          G  I  Q      S E LV            ++   
Sbjct: 336  SFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAA 395

Query: 660  KNSGIYPNV---VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            K + I  N    V+WT++I+G +QN    E+L+ F  M++  + P+  T SS ++    L
Sbjct: 396  KTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNL 455

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
             ++  G+++H   +++G +   +  + L+DMY+K G L  A + F +   +   SWN +I
Sbjct: 456  AMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVI 515

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
              +A YG  K AI +F  +L  GF+PD++TF ++L+AC ++GL EE  KYF+ M  +Y I
Sbjct: 516  SAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGI 575

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P  EHYSC++D LG+ G  D+  + +  MPF+ D  IW ++L SCR HG+ + A +A+ 
Sbjct: 576  SPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAE 635

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            +LF +   ++  Y ++ N+ A + +WED   ++  M + G++    +SW+++   V+ FS
Sbjct: 636  KLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFS 695

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            +    +P   EI  EL  L  EM K GY PDT C  Q +D++ K + L  H+E+LAI + 
Sbjct: 696  SNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFA 755

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+ T    PIRV+KN   C DCH+A K MS +  R+I +RD +RFHHF++G CSC D W
Sbjct: 756  LINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 224/505 (44%), Gaps = 42/505 (8%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           + S H   +K+G + ++  +  +L+  Y + G   +A + F     R    +++ +    
Sbjct: 158 IASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCS 217

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
             G    E L+++  +  KG+       + +L + T +    LG +VH  L+ R    +V
Sbjct: 218 KEGSHA-EALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHG-LVARATSSNV 275

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  +L++FY KC  ++   KLF E+ +  D++ +N +I     N      ++LFREMQ 
Sbjct: 276 FVNNSLLDFYSKCDCLDEMKKLFHEMIE-RDNVSYNVMIAGYAWNRCASIVLRLFREMQS 334

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            S    +     +L     V     GKQIH  ++   L S   V N LI MYS+   L+ 
Sbjct: 335 LSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDA 394

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A   F +  D    SW +MI+     G  + A  LF  M  + + PD  T+         
Sbjct: 395 AKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATF--------- 445

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                     S  ++A + L ++  GR+ H Y++R+G    ++ 
Sbjct: 446 --------------------------SSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFS 479

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           G++L+DMY K  CL  A + FD M  RN ++WN++IS Y   G   NA KM   M     
Sbjct: 480 GSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGF 539

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESL 688
           KPD V++ S++S  S  G ++E +     M+   GI P    ++ +I    +   + +  
Sbjct: 540 KPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQ 599

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
           +   +M  ED   +    SS+L +C
Sbjct: 600 EMLGEMPFED---DPIIWSSILHSC 621



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 20/328 (6%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  HAQ++ +G   +S+D+V  +LI  Y + G   +A   F     ++   W++ +    
Sbjct: 361 KQIHAQLVLLG--LSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCV 418

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G+ +E L+++  +   G+       +  +K  + L    LG ++H+ LI+ G    V
Sbjct: 419 Q-NGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSV 477

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
               AL++ Y KC  ++ A + F E+ +  + + WN +I       + +NAIK+F  M  
Sbjct: 478 FSGSALLDMYTKCGCLDEALQTFDEMPE-RNSISWNAVISAYAHYGQAKNAIKMFEGMLC 536

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV----CNCLISMYSRNN 445
              K  S T + +L AC+  G   E  +   Y      E  +S      +C+I    R  
Sbjct: 537 YGFKPDSVTFLSVLSACSHNGLAEECMK---YFELMEYEYGISPWKEHYSCVIDTLGRVG 593

Query: 446 KLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNK---MNSSRIQPDIITWN 501
           + +    +   M  + +   W+S++ S    G  D+A     K   M S+   P +I  N
Sbjct: 594 RFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSN 653

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
                    G +++   + + M+  G R
Sbjct: 654 IFAKA----GKWEDAAGVKKIMRDRGLR 677


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 244/781 (31%), Positives = 391/781 (50%), Gaps = 68/781 (8%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y+  G    A   F+       + W+  +  + +  G+    L  + ++ G GV      
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGF-TMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              ++K C  L +  +G  VH ++   G   DV +  +L+  Y +   +  A  LF  + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             +D +LWN ++   ++N    NAIK+F EM+ S  K  S T   +L  CA       G 
Sbjct: 121 Q-KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+HG  +   LE +  V N L++MYS+   L+ A ++FD++                   
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLP------------------ 221

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                            Q D+++WN ++SG+  +G       L RGM S G +P+  + +
Sbjct: 222 -----------------QSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFA 264

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             L  V EL  LK+ +E HGYI+R+ +  D+++ ++L+D+Y K   ++ AQ+      + 
Sbjct: 265 SFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSF 324

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---SGYSIWGQSKE-- 651
           + V   ++ISGY   G    A +    + +E +KP  V+++S+    +G +     KE  
Sbjct: 325 DTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELH 384

Query: 652 --------------------------ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                                      L +   + N     + + W S+I+   QN    
Sbjct: 385 GSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPG 444

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           E++  F QM  E  + +  ++S  L  C  L  L  GKEIH L +K     D Y  + LI
Sbjct: 445 EAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLI 504

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
           DMY+K GNL  +R VF +   K   SWN +I  +  +G+ KE + LFHE+L  G QPD +
Sbjct: 505 DMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHV 564

Query: 806 TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
           TF  +++AC ++G V+EG +Y+  M+ +Y I   +EHY+C+ D+ G+AG L EA++ I +
Sbjct: 565 TFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINS 624

Query: 866 MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
           MPF PDA +WG LLG+C IHG++E AE+AS+ LF L+P NS  Y L+ N+ A + +W  V
Sbjct: 625 MPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKV 684

Query: 926 ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
            ++R  M E GV+ V  +SWI+++   H+F A    HP T +IY  L  L+ E+KK GYV
Sbjct: 685 LKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYV 744

Query: 986 P 986
           P
Sbjct: 745 P 745



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 214/487 (43%), Gaps = 86/487 (17%)

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY R   L+ A  +F +++    S+WN MI  +T +G  + A   + KM  + + PD  T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           +                                     V++A   L+ +K G+  H  + 
Sbjct: 61  F-----------------------------------PYVVKACCGLKSVKMGKIVHETVN 85

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
             GL  D++VG+SL+ +Y +N  L +AQ +FDN+  ++ V WN +++GY   G   NA K
Sbjct: 86  LMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145

Query: 620 MLNQMEEEEIKPDLVSW-----------------------------------NSLVSGYS 644
           +  +M   EIKP+ V++                                   N+L++ YS
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYS 205

Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                + A  +   +  S    ++V+W  +ISG +QN    E+   F  M    IKP+S 
Sbjct: 206 KCQCLQAARKLFDTLPQS----DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSI 261

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T +S L     L  L++ KEIH   +++  + D ++ + LID+Y K  +++ A++   +S
Sbjct: 262 TFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQS 321

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
           ++        MI G+ + G  KEA+  F  L++   +P ++TF+++  A      +  G 
Sbjct: 322 SSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGK 381

Query: 825 KYFDSMSTDYNIIPTIEHYSCMV-----DLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           +   S      II T     C V     D+  K G LD A      +  K DA  W +++
Sbjct: 382 ELHGS------IIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK-DAICWNSMI 434

Query: 880 GSCRIHG 886
            SC  +G
Sbjct: 435 TSCSQNG 441



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 140/611 (22%), Positives = 247/611 (40%), Gaps = 82/611 (13%)

Query: 218 IKMGKIWNS--------DDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
           +KMGKI +         +D+    SLI  Y E G  + A   F     +    W+  L  
Sbjct: 74  VKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNG 133

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           Y    G+    ++++ E+    +   S     +L +C       LG ++H   +  G + 
Sbjct: 134 YVK-NGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLEL 192

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           D  +   L+  Y KC+ +++A KLF  +    D + WN II   ++N     A  LFR M
Sbjct: 193 DSPVANTLLAMYSKCQCLQAARKLFDTLPQ-SDLVSWNGIISGYVQNGLMGEAEHLFRGM 251

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
             +  K  S T    L    ++ +    K+IHGY+++ A+  ++ + + LI +Y +   +
Sbjct: 252 ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDV 311

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
           E+A +        NL   +S                            D +    ++SG+
Sbjct: 312 EMAQK--------NLCQSSSF---------------------------DTVVCTTMISGY 336

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
             +G  +  L   R +     +P   + S +  A   L  L  G+E HG I++  LD   
Sbjct: 337 VLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKC 396

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           +VG++++DMY K   L  A  VF+ +  ++ + WNS+I+     G    A  +  QM  E
Sbjct: 397 HVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGME 456

Query: 628 EIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMKNSGIYP---------------- 666
             + D VS +  +S  +      +G+    L+I   ++ S +Y                 
Sbjct: 457 GTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR-SDLYAESSLIDMYAKCGNLNF 515

Query: 667 -----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                      N V+W S+IS    + + +E L  F +M +  I+P+  T   ++  CG 
Sbjct: 516 SRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGH 575

Query: 716 LGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WN 773
            G +  G +  H +  + G          + DM+ ++G L  A E          A  W 
Sbjct: 576 AGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWG 635

Query: 774 CMIMGFAIYGN 784
            ++    I+GN
Sbjct: 636 TLLGACHIHGN 646



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 158/314 (50%), Gaps = 7/314 (2%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFS 255
           FL   N+   L   K  H  +I+   +   D  +KS LI  Y +  D   A K      S
Sbjct: 266 FLPCVNELLSLKHCKEIHGYIIRHAVVL--DVFLKSALIDIYFKCRDVEMAQKNLCQSSS 323

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
                 ++ +  Y    G+ +E LE +  L  + +   S   + I      L A  LG E
Sbjct: 324 FDTVVCTTMISGY-VLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKE 382

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H S+IK   D   H+  A+++ Y KC  ++ A ++F+ +++ +D + WN +I    +N 
Sbjct: 383 LHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITE-KDAICWNSMITSCSQNG 441

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
           +   AI LFR+M     +    +I   L ACA + A H GK+IHG ++K  L S+L   +
Sbjct: 442 RPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAES 501

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            LI MY++   L  + RVFD M++ N  SWNS+IS+Y   G +    +LF++M  + IQP
Sbjct: 502 SLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQP 561

Query: 496 DIITWNCLLS--GH 507
           D +T+  ++S  GH
Sbjct: 562 DHVTFLGIISACGH 575



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/273 (20%), Positives = 119/273 (43%), Gaps = 5/273 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  H  +IK  K+     +  +++  Y + G    A + F     +    W+S +    S
Sbjct: 381 KELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSC-S 438

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G   E + ++ ++  +G  +    ++  L  C  L A   G E+H  +IK     D++
Sbjct: 439 QNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLY 498

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
            + +L++ Y KC ++  + ++F  + + ++++ WN II     +   +  + LF EM  +
Sbjct: 499 AESSLIDMYAKCGNLNFSRRVFDRMQE-KNEVSWNSIISAYGNHGDLKECLALFHEMLRN 557

Query: 391 SAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
             +    T + ++ AC   G   EG +  H    +  + + +    C+  M+ R  +L  
Sbjct: 558 GIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHE 617

Query: 450 ATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
           A    +SM    +   W +++ +    G V++A
Sbjct: 618 AFETINSMPFPPDAGVWGTLLGACHIHGNVELA 650


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/638 (35%), Positives = 353/638 (55%), Gaps = 52/638 (8%)

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +LFNK      + D+ +WN L++     G     L     M+ L  +PN S+    +++ 
Sbjct: 36   TLFNKYFD---RTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSC 92

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            + L  L  G+++H   L  G + DL+V ++L+DMY K   L NA+ +FD +  RNIV W 
Sbjct: 93   SALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWT 152

Query: 603  SLISGY-----CFKGLFVNAKKMLNQMEE--EEIKPDLVSW------------------- 636
            SLI+GY       + L V  + +  + E   EE+   + S                    
Sbjct: 153  SLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSE 212

Query: 637  ------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                              N+L+  Y+  G+   +  +   M       +VV+W S+I+  
Sbjct: 213  GVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE----KDVVSWNSMIAVY 268

Query: 679  LQNENYRESLKFFIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             QN    ++ + F  M +    K N  T+S+LL  C   G L+ G  +H   +K G++ +
Sbjct: 269  AQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNN 328

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
              +AT +IDMY K G  + AR  F     K + SW  MI G+ ++G  +EA+ +F++++ 
Sbjct: 329  VIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIW 388

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G +P+ ITF ++LAAC ++G +EEGW++F++MS +YN+ P +EHY CMVDLLG+AGY+ 
Sbjct: 389  AGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIK 448

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA++ I++M  + D  +WG+LL +CRIH  +E AEI++R LFKL+P N   Y L+ N+ A
Sbjct: 449  EAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYA 508

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             + RW+DVER+R  + + G+     +S +++   VHVF      HP   +IY  L  L  
Sbjct: 509  DAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSV 568

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            ++++ GYVP+   V  D+DEEEK  ++  H+EKLA+ +G+M +   + I VIKN RVC D
Sbjct: 569  KLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGD 628

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CHT  K +S +  REI +RD  RFHHF++G CSC D W
Sbjct: 629  CHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 188/420 (44%), Gaps = 48/420 (11%)

Query: 244 TSAAKAFFLYFSRSYA-DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILK 302
           T+    F  YF R+    W+S + +  + GG+  E L  +  +    +          +K
Sbjct: 32  TNLTTLFNKYFDRTDVYSWNSLIAEL-ARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIK 90

Query: 303 LCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
            C+ L     G + H   +  GF+ D+ +  AL++ Y KC  + +A  LF E+    + +
Sbjct: 91  SCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPR-RNIV 149

Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKA---------ISRTIVKMLQACAKVGAFH 413
            W  +I   ++N+    A+ +F+E  F  ++           S  ++ +L AC++V    
Sbjct: 150 TWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKA 209

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
             + +HG  +K  L+  + V N L+  Y++  ++ L+ +V                    
Sbjct: 210 VSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKV-------------------- 249

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNG 532
                      F+ M     + D+++WN +++ +  +G   +   +  GM ++ G + N 
Sbjct: 250 -----------FDDM----AEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNE 294

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++S +L A      L+ G   H  +++ G   ++ + TS++DMY K    + A+  FD 
Sbjct: 295 VTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDG 354

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           MK +N+ +W ++I+GY   G    A  +  QM    +KP+ +++ S+++  S  G  +E 
Sbjct: 355 MKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG 414



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 15/322 (4%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYF 254
           C +   +    L+S K  H Q +  G  + SD  V S LI  Y + G  ++A   F    
Sbjct: 87  CAIKSCSALFDLNSGKQAHQQALVFG--FESDLFVSSALIDMYSKCGKLSNARVLFDEIP 144

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGEL-------HGK--GVIFRSRILTIILKLCT 305
            R+   W+S +  Y     +  E L V+ E        +G+  G    S  +  +L  C+
Sbjct: 145 RRNIVTWTSLITGYVQ-NDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACS 203

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
           ++    +   VH   IK G D  + ++  L++ Y KC +V  + K+F ++++ +D + WN
Sbjct: 204 RVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE-KDVVSWN 262

Query: 366 EIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            +I V  +N    +A ++F  M +    K    T+  +L ACA  GA   G  +H  V+K
Sbjct: 263 SMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIK 322

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
               +N+ +   +I MY +  + E+A   FD MK+ N+ SW +MI+ Y   G+   A  +
Sbjct: 323 MGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDV 382

Query: 485 FNKMNSSRIQPDIITWNCLLSG 506
           F +M  + ++P+ IT+  +L+ 
Sbjct: 383 FYQMIWAGVKPNYITFISVLAA 404


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 257/870 (29%), Positives = 420/870 (48%), Gaps = 116/870 (13%)

Query: 237  YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG-VIFRSR 295
            Y + G  + A + F     R  A W++ +  Y        + LE +  +H  G  +  + 
Sbjct: 81   YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQ-ARRFLDGLETFVSMHRSGDSLPNAF 139

Query: 296  ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
                ++K C  L    L  ++     K  F  D  ++ AL++ + +C  V+ A++LFS++
Sbjct: 140  TFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 199

Query: 356  S----------------------------DL--EDDLLWNEIIMVKLRNEKWENAIKLFR 385
                                         D+   D + WN +I    ++ +   A+ L  
Sbjct: 200  ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 259

Query: 386  EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            EM     +  S T    L ACA++ +   GKQ+H  V++S  + +  V + LI +Y++  
Sbjct: 260  EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 319

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
              + A RVF+S++D N  SW  +I           +  LFN+M +  +  D      L+S
Sbjct: 320  SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            G F                                       L  GR+ H   L++G + 
Sbjct: 380  GCFNRMD-----------------------------------LCLGRQLHSLCLKSGHNR 404

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
             + V  SL+ +Y K   LQNA+ VF +M  R+IV+W S+I+ Y   G  + A++  + M+
Sbjct: 405  AIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMD 464

Query: 626  EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                  + ++WN+++  Y   G  ++ L +   M                          
Sbjct: 465  TR----NAITWNAMLGAYIQHGAEEDGLKMYSAM-------------------------- 494

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
                    + Q+D+ P+  T  +L + C  +G  + G +I    +K G I +  VA   I
Sbjct: 495  --------LSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAI 546

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
             MYSK G +  A+++F     K + SWN MI G++ +G GK+A   F ++L  G +PD I
Sbjct: 547  TMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYI 606

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            ++ A+L+ C +SGLV+EG  YFD M+  + I P +EH+SCMVDLLG+AG+L EA D I  
Sbjct: 607  SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDK 666

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP KP A +WGALL +C+IHG+ E AE+A++ +F+L+  +S +Y L+  + + + + +D 
Sbjct: 667  MPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDS 726

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
             ++R  M + G+K    +SW++++  VHVF A+   HP    I  +L  L+ ++  LGYV
Sbjct: 727  AQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYV 786

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
                         E  +  + H+EKLA+ +G+M   +  PI ++KN R+C DCHT  K +
Sbjct: 787  -----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLI 835

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S V  RE  +RDG RFHHF+ G CSC D W
Sbjct: 836  SSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/542 (22%), Positives = 238/542 (43%), Gaps = 52/542 (9%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A+++ +   L++C   GA    + +HG ++   L S + + N L+  Y     L  A R+
Sbjct: 2   AVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRL 61

Query: 454 FDS-MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
             + +K+ N+ + N M++ Y   G +  A  LF++M     + D+ +WN L+SG+F    
Sbjct: 62  LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSGYFQARR 117

Query: 513 YQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
           + + L     M   G   PN  +   V+++   L   +   +  G   +     D  V T
Sbjct: 118 FLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVET 177

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DM+V+                             C  G    A ++ +Q+E    +P
Sbjct: 178 ALVDMFVR-----------------------------C--GYVDFASRLFSQIE----RP 202

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
            +   NS+++GY+       A+     M       +VV+W  +I+   Q+   RE+L   
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAER----DVVSWNMMIAALSQSGRVREALGLV 258

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
           ++M ++ ++ +STT +S L  C  L  L  GK++H   +++    D YVA+ LI++Y+K 
Sbjct: 259 VEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC 318

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G+ K A+ VF    ++   SW  +I G   Y    +++ LF+++       D      L+
Sbjct: 319 GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI 378

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
           + C N   +  G +   S+         I   + ++ L  K G L  A +F+ +   + D
Sbjct: 379 SGCFNRMDLCLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERD 436

Query: 872 ATIWGALLGSCRIHGHLEYAEIASRRLFK-LEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
              W +++ +    G++    I +R  F  ++  N+  +N M+         ED  ++  
Sbjct: 437 IVSWTSMITAYSQIGNI----IKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYS 492

Query: 931 SM 932
           +M
Sbjct: 493 AM 494



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/499 (23%), Positives = 208/499 (41%), Gaps = 89/499 (17%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE--- 266
           K  HA++I+   +   D  V S LI  Y + G F  A + F     R+   W+  +    
Sbjct: 290 KQLHAKVIR--SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSL 347

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            YE F   V    E++ ++  + +      L  ++  C   M   LG ++H+  +K G +
Sbjct: 348 QYECFSKSV----ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 403

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVS------------------------------ 356
             + +  +L++ Y KC D+++A  +FS +S                              
Sbjct: 404 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM 463

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR---TIVKMLQACAKVGAFH 413
           D  + + WN ++   +++   E+ +K++  M   S K ++    T V + + CA +GA  
Sbjct: 464 DTRNAITWNAMLGAYIQHGAEEDGLKMYSAML--SQKDVTPDWVTYVTLFRGCADIGANK 521

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G QI G+ +K+ L  N+SV N  I+MYS+  ++  A ++FD +   ++ SWN+MI+ Y+
Sbjct: 522 LGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYS 581

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNG 532
             G    A   F+ M S   +PD I++  +LSG    G  Q        M  + G  P  
Sbjct: 582 QHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGL 641

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
              S ++  +        GR  H                           L  A+++ D 
Sbjct: 642 EHFSCMVDLL--------GRAGH---------------------------LTEAKDLIDK 666

Query: 593 MKNRNIV-AWNSLISGYCFKG---LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           M  +     W +L+S     G   L   A K + +++     PD  S+  L   YS  G+
Sbjct: 667 MPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDS----PDSGSYMLLAKIYSDAGK 722

Query: 649 SKEALVIIHHMKNSGIYPN 667
           S ++  +   M++ GI  N
Sbjct: 723 SDDSAQVRKLMRDKGIKKN 741


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/645 (33%), Positives = 361/645 (55%), Gaps = 42/645 (6%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            NS+I+ Y  +  V +A +LF++M     + ++++W+ L++G+  +G    V+ LL+ M S
Sbjct: 70   NSLINFYAKVNQVSIAHNLFDRMP----ERNVVSWSALMTGYLLNGFSLKVIRLLKDMIS 125

Query: 526  LG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
             G   PN   +++ + +  +   ++ GR+ HG +L+ G  +  YV  +L+ MY K   +Q
Sbjct: 126  EGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQ 185

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            +A  V++ +   +IVA+NS++S     G      ++L  M  E +K D V++   V+ +S
Sbjct: 186  DAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTF---VNAFS 242

Query: 645  IWGQSKEALVIIH-----------------------------HMKNSGIYP-----NVVT 670
            +    K+  + +H                              +   G++      NVV 
Sbjct: 243  LCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVL 302

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            WT++++   QN  + E+L  F +M+QE++K N  T + LL  C GL   +NG  +H    
Sbjct: 303  WTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSE 362

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K+GF     V   LI+MY+KSG++++A++VF    ++ + +WN MI GF+ +G GK+A+L
Sbjct: 363  KSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALL 422

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            +F ++L     P+ +TFT +L+AC + GLV+EG+ Y   +   + + P +EHY+C+V LL
Sbjct: 423  VFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLL 482

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
             K G L+EA +F+RT P K D   W  LL +C +H +       +  + +++P +   Y 
Sbjct: 483  SKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYT 542

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A   RW+ V ++R  M +  +K     SWI+I  + H+F++E   HP  G+ Y 
Sbjct: 543  LLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQ 602

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            ++  L++ +K LGY PD   V  D+++E+K   L  H+EKLAI YGL+K  S A I VIK
Sbjct: 603  KVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIK 662

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R+C DCH+A + +S V  R I +RD  RFHHFR+G CSC D W
Sbjct: 663  NLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 225/505 (44%), Gaps = 41/505 (8%)

Query: 211 KSKHAQMIKMGK-IWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K+ H+ +I   +   NS   V SLI  Y +    + A   F     R+   WS+ +  Y 
Sbjct: 49  KTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYL 108

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
             G  ++ +  +   +    V     IL I +  C        G + H  L+K GF F  
Sbjct: 109 LNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHN 168

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           +++ AL++ Y KC  V+ A  +++EV  + D + +N I+   + N      +++ R M  
Sbjct: 169 YVRNALVSMYSKCSIVQDAMGVWNEVP-VNDIVAYNSILSSLVENGYLREGLEVLRSMVS 227

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            S K    T V     CA +     G  +HG +L S +E +  V + +I+MY +  K  +
Sbjct: 228 ESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLM 287

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  VFD ++  N+  W ++++S    G  + A +LF+KM    ++          S  FT
Sbjct: 288 ARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVK----------SNEFT 337

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           +        LL     L  R NGS +                   HG+  ++G  + + V
Sbjct: 338 YA------VLLNACAGLSARRNGSLL-------------------HGHSEKSGFKHHVMV 372

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           G +L++MY K+  ++ A++VF +M +R+I+ WN++I G+   GL   A  +   M   E 
Sbjct: 373 GNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEE 432

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHH-MKNSGIYPNVVTWTSLISGSLQNENYRESL 688
            P+ V++  ++S     G  +E    +HH MK  G+ P +  +T ++S   +     E+ 
Sbjct: 433 HPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEAR 492

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
            F   M+   +K +     +LL  C
Sbjct: 493 NF---MRTAPVKWDVVAWRTLLNAC 514



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/525 (22%), Positives = 235/525 (44%), Gaps = 74/525 (14%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLI--KRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           L  +LKL        +G  +H+ LI   R  +  +    +L+NFY K   V  A+ LF  
Sbjct: 32  LIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDR 91

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM-LQACAKVGAFH 413
           + +  + + W+ ++   L N      I+L ++M      + +  I+ + + +C   G   
Sbjct: 92  MPE-RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVE 150

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           EG+Q HG +LK+    +  V N L+SMYS+ + ++ A  V++ +  +++ ++NS++SS  
Sbjct: 151 EGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLV 210

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             GY+     +   M S  ++ D +T             + N  +L              
Sbjct: 211 ENGYLREGLEVLRSMVSESVKWDKVT-------------FVNAFSL-------------- 243

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
                      L+ L+ G   HG +L + ++ D YV +++++MY K      A+ VFD +
Sbjct: 244 --------CASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGL 295

Query: 594 KNRNIVAWNSLISGYCFK-GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           ++RN+V W ++++  CF+ G F  A  + ++ME+E +K +  ++  L++  +     +  
Sbjct: 296 QSRNVVLWTAVMAS-CFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNG 354

Query: 653 LVIIHHMKNSG-------------------------------IYPNVVTWTSLISGSLQN 681
            ++  H + SG                               ++ +++TW ++I G   +
Sbjct: 355 SLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHH 414

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYV 740
              +++L  F  M   +  PN  T + +L  CG LGL+Q G   +H L  + G       
Sbjct: 415 GLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEH 474

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGN 784
            T ++ + SK+G L  AR   R +  K  + +W  ++    ++ N
Sbjct: 475 YTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQN 519


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/722 (31%), Positives = 370/722 (51%), Gaps = 68/722 (9%)

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
            M     KA   T + +L +     A  +GK IH  V +S    ++ V   L++ Y++   
Sbjct: 1    MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 447  LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            L  A +VFD M   ++ +WNSMIS+Y+       A+ +F +                   
Sbjct: 61   LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQR------------------- 101

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                            MQ  G R +  +   +L A      L++G+     I     + D
Sbjct: 102  ----------------MQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELD 145

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            L+VGT+L+ MY +    +NA +VF  MK +N++ W+++I+ +   G    A +    M++
Sbjct: 146  LFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQ 205

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEA-----LVIIHHMKNSGIYPN-------------- 667
            E I P+ V++ SL++G++     +E      L+  H + ++    N              
Sbjct: 206  EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGEL 265

Query: 668  --------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                          +  W  LI+G   +   RE+L+ + ++Q E I  +  T  S+L  C
Sbjct: 266  DVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNAC 325

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
                 L  GK IH   ++ G   D  V   L +MYSK G++++AR +F     ++  SWN
Sbjct: 326  TSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWN 385

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             M+  +A +G  +E + L  ++ + G + + ITF ++L++C ++GL+ EG +YF S+  D
Sbjct: 386  GMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHD 445

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
              I    EHY C+VDLLG+AG L EA  +I  MP +P+   W +LLG+CR+H  L+  ++
Sbjct: 446  RGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKL 505

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A+R+L +L+P NS+   ++ N+ +    W++  +LR +M    VK V   S IQ+   VH
Sbjct: 506  AARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVH 565

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             F      HP   EIY ++  L   M++ GYVPDT+ V  D+DEE+K  +L  H+EKLAI
Sbjct: 566  EFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAI 625

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +GL+ T  ++ + + KN RVC DCHTA K++S + GREI +RD  RFHHFR+G CSC D
Sbjct: 626  AFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKD 685

Query: 1074 CW 1075
             W
Sbjct: 686  YW 687



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 230/543 (42%), Gaps = 48/543 (8%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + G  T A K F     RS   W+S +  Y S      E   ++  +  +G  
Sbjct: 50  ALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY-SISERSGEAFFIFQRMQHEGER 108

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   IL  C        G  V  S+ +  F+ D+ +  AL+  Y +CR  E+A ++
Sbjct: 109 CDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQV 168

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +   ++ + W+ II     +     A++ FR MQ         T + +L        
Sbjct: 169 FGRMKQ-KNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSG 227

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSR--NNKLELATRVFDSMKDHNLSSWNSMI 469
             E  +IH  + +  L+   ++ N L+++Y R    +L++A  +   M +  +++WN +I
Sbjct: 228 LEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLI 287

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           + YT  G    A   + ++    I  D +T+                             
Sbjct: 288 NGYTLHGRSREALETYQRLQLEAIPVDKVTF----------------------------- 318

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                +S VL A T    L  G+  H   +  GLD D+ V  +L +MY K   ++NA+ +
Sbjct: 319 -----IS-VLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 372

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           FD+M  R+ V+WN ++  Y   G      K++ +ME+E +K + +++ S++S  S  G  
Sbjct: 373 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 432

Query: 650 KEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            E     H +  + GI      +  L+    +    +E+ K+  +M  E   P   T +S
Sbjct: 433 AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSE---PEIVTWAS 489

Query: 709 LLQTCGGLGLLQNGK--EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           LL  C     L  GK      L L  G   ++  +  L ++YS+ G+ K+A ++ R  A+
Sbjct: 490 LLGACRVHKDLDRGKLAARKLLELDPG---NSSASVVLSNIYSERGDWKNAAKLRRAMAS 546

Query: 767 KTL 769
           + +
Sbjct: 547 RRV 549



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 216/528 (40%), Gaps = 79/528 (14%)

Query: 309 AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
           A   G  +H+ + +     DV +  AL+N Y KC  +  A K+F  +        WN +I
Sbjct: 25  ALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP-CRSVGTWNSMI 83

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
                +E+   A  +F+ MQ    +    T + +L AC        GK +   + +++ E
Sbjct: 84  SAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFE 143

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            +L V   LI+MY+R    E A +VF  MK  NL +W+++I+++   G+   A   F  M
Sbjct: 144 LDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMM 203

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
               I P+ +T+  LL+G  T                    P+G      L+ ++ + LL
Sbjct: 204 QQEGILPNRVTFISLLNGFTT--------------------PSG------LEELSRIHLL 237

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC--LQNAQEVFDNMKNRNIVAWNSLIS 606
                    I  +GLD    +  +L+++Y + +   L  A+ +   M  + I AWN LI+
Sbjct: 238 ---------ITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLIN 288

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------------ 636
           GY   G    A +   +++ E I  D V++                              
Sbjct: 289 GYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDS 348

Query: 637 -----NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
                N+L + YS  G  + A  I   M       + V+W  ++    Q+    E LK  
Sbjct: 349 DVIVKNALTNMYSKCGSMENARRIFDSMP----IRSAVSWNGMLQAYAQHGESEEVLKLI 404

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            +M+QE +K N  T  S+L +C   GL+  G +  H L    G          L+D+  +
Sbjct: 405 RKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGR 464

Query: 751 SGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           +G L+ A +   K  +   + +W  ++    ++ +     L   +LLE
Sbjct: 465 AGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLE 512



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 94/431 (21%), Positives = 162/431 (37%), Gaps = 70/431 (16%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+  +  Y +  G  +E LE +  L  + +         +L  CT   +   G  +H++ 
Sbjct: 283 WNVLINGY-TLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNA 341

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++ G D DV +K AL N Y KC  +E+A ++F  +  +   + WN ++    ++ + E  
Sbjct: 342 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMP-IRSAVSWNGMLQAYAQHGESEEV 400

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVLKSALESNLSVCNCLIS 439
           +KL R+M+    K    T V +L +C+  G   EG Q  H       +E       CL+ 
Sbjct: 401 LKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVD 460

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           +  R  KL+ A +    M                                    +P+I+T
Sbjct: 461 LLGRAGKLQEAEKYISKMPS----------------------------------EPEIVT 486

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           W  LL     H          R +  L   P  SS SVVL  +   R    G   +   L
Sbjct: 487 WASLLGACRVHKDLDRGKLAARKL--LELDPGNSSASVVLSNIYSER----GDWKNAAKL 540

Query: 560 RNGLD----------YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
           R  +             + V   + +  V++     A E++D ++              C
Sbjct: 541 RRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEE------------LC 588

Query: 610 F----KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
           F     G   + K +L+ ++EE+ K  L++++S     +    S      +H  KN  + 
Sbjct: 589 FAMREAGYVPDTKMVLHDVDEEQ-KESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVC 647

Query: 666 PNVVTWTSLIS 676
            +  T T  IS
Sbjct: 648 EDCHTATKFIS 658


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 278/922 (30%), Positives = 458/922 (49%), Gaps = 82/922 (8%)

Query: 229  MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY----ESFGGEVQELLEVWGE 284
            ++ +LI  Y + G  T A + F     R    W+S L  Y    E     +Q+   ++  
Sbjct: 76   LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135

Query: 285  LHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            L  + V++ SR+ L+ +LKLC      W     H    K G D D  +  AL+N Y K  
Sbjct: 136  LR-QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194

Query: 344  DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL---FREMQFSSAKAISRTIV 400
             V+    LF E+    D +LWN ++   L     E AI L   F     +  +   R + 
Sbjct: 195  KVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253

Query: 401  KML---QACAKVGAFHEGKQIHGYV--------LKSALESNL--SVCNCLISMYSRNNK- 446
            ++        +V +F  G               L   L S    ++  C   M   + + 
Sbjct: 254  RISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313

Query: 447  ------LELATRV-FDSMK--------------DHNLSSWNSMISSYTGLGYVDVAWSLF 485
                  L LAT V  DS+               D  L+  NS+I+ Y  L     A ++F
Sbjct: 314  DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373

Query: 486  NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
            + M+    + D+I+WN +++G   +G     + L   +   G +P+  +++ VL+A + L
Sbjct: 374  DNMS----ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429

Query: 546  -RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
               L   ++ H + ++     D +V T+L+D Y +N C++ A+ +F+   N ++VAWN++
Sbjct: 430  PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAM 488

Query: 605  ISGYCFKGLFVNAKKMLNQMEEEEIKPD-------------LVSWN--------SLVSGY 643
            ++GY          K+   M ++  + D             L + N        ++ SGY
Sbjct: 489  MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548

Query: 644  --SIWGQSK--EALVIIHHMK------NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
               +W  S   +  V    M       +S   P+ V WT++ISG ++N     +   F Q
Sbjct: 549  DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            M+   + P+  T+++L +    L  L+ G++IH   LK     D +V T L+DMY+K G+
Sbjct: 609  MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            +  A  +F++     + +WN M++G A +G GKE + LF ++   G +PD +TF  +L+A
Sbjct: 669  IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C +SGLV E +K+  SM  DY I P IEHYSC+ D LG+AG + +A + I +M  +  A+
Sbjct: 729  CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            ++  LL +CR+ G  E  +  + +L +LEP +S+ Y L+ N+ A +++W++++  R  M 
Sbjct: 789  MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
               VK    +SWI++   +H+F  +   +  T  IY ++  ++ ++K+ GYVP+T     
Sbjct: 849  GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D++EEEK + L  H+EKLA+ +GL+ T    PIRVIKN RVC DCH A KY++ V  REI
Sbjct: 909  DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             LRD  RFH F++G CSC D W
Sbjct: 969  VLRDANRFHRFKDGICSCGDYW 990



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/646 (23%), Positives = 287/646 (44%), Gaps = 75/646 (11%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG   HA ++    + +  L   L++ Y KC  +  A ++F ++ D  D + WN I+   
Sbjct: 57  LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-RDLVSWNSILAAY 115

Query: 372 LRN-----EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
            ++     E  + A  LFR ++         T+  ML+ C   G     +  HGY  K  
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
           L+ +  V   L+++Y +  K++    +F+ M   ++  WN M+ +Y  +G+ + A  L +
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235

Query: 487 KMNSSRIQPDIITWNCL----------------------------------LSGHFTHGS 512
             +SS + P+ IT   L                                  LS +   G 
Sbjct: 236 AFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ 295

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
           Y  +L     M       +  +  ++L    ++  L  G++ H   L+ GLD  L V  S
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L++MY K      A+ VFDNM  R++++WNS+I+G    GL V A  +  Q+    +KPD
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415

Query: 633 -------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP------------------- 666
                  L + +SL  G S+  Q     + I+++ +S +                     
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475

Query: 667 -----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                ++V W ++++G  Q+ +  ++LK F  M ++  + +  T++++ +TCG L  +  
Sbjct: 476 ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           GK++H   +K+G+  D +V++G++DMY K G++ +A+  F         +W  MI G   
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTI 840
            G  + A  +F ++   G  PD  T   L  A      +E+G + + +++  +    P +
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV 655

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
              + +VD+  K G +D+A+   + +    + T W A+L     HG
Sbjct: 656 G--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHG 698



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 122/333 (36%), Gaps = 94/333 (28%)

Query: 524 QSLGFRPNG-SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           Q  GF  N  +S  ++L   T  R+L +      +++ N           L+ MY K   
Sbjct: 41  QWFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINN-----------LISMYSKCGS 89

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKG------------LFVNAKKMLNQMEEEEIK 630
           L  A+ VFD M +R++V+WNS+++ Y                LF   ++ +       + 
Sbjct: 90  LTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLS 149

Query: 631 PDL-------VSWNS---------------------LVSGYSIWGQSKEALVIIHHMKNS 662
           P L         W S                     LV+ Y  +G+ KE  V+   M   
Sbjct: 150 PMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP-- 207

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
             Y +VV W  ++   L+     E++          + PN  T+  L +  G        
Sbjct: 208 --YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD------- 258

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAI 781
                         DA    G +  ++   +  S  E +FR   NK L+ +         
Sbjct: 259 ------------DSDA----GQVKSFANGNDASSVSEIIFR---NKGLSEY--------- 290

Query: 782 YGNGKEAILL--FHELLETGFQPDAITFTALLA 812
             +G+ + LL  F +++E+  + D +TF  +LA
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLA 323


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 282/906 (31%), Positives = 439/906 (48%), Gaps = 102/906 (11%)

Query: 222  KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEV 281
            ++ N D +   +I  Y   G    +   F    S++   W++ +  Y S      E+LE 
Sbjct: 115  RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY-SRNELYDEVLET 173

Query: 282  WGELHGKGVIFRSRIL-TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
            + E+     +         ++K C  +    +G+ VH  ++K G   DV +  AL++FYG
Sbjct: 174  FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233

Query: 341  KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI----S 396
                V  A +LF ++    + + WN +I V   N   E +  L  EM   +         
Sbjct: 234  THGFVTDALQLF-DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
             T+V +L  CA+      GK +HG+ +K  L+  L + N L+ MYS+   +  A  +F  
Sbjct: 293  ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 352

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
              + N+ SWN+M+  ++  G                                THG++   
Sbjct: 353  NNNKNVVSWNTMVGGFSAEGD-------------------------------THGTFD-- 379

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVT---ELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              +LR M + G       V+ +L AV        L   +E H Y L+    Y+  V  + 
Sbjct: 380  --VLRQMLAGGEDVKADEVT-ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC----------------FKGLFVNA 617
            +  Y K   L  AQ VF  ++++ + +WN+LI G+                   GL  ++
Sbjct: 437  VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496

Query: 618  -------------------KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
                               K++   +    ++ DL  + S++S Y   G+      +   
Sbjct: 497  FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            M++     ++V+W ++I+G LQN     +L  F QM    I+    +M  +   C  L  
Sbjct: 557  MEDK----SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            L+ G+E H   LK+    DA++A  LIDMY+K+G++  + +VF     K+ ASWN MIMG
Sbjct: 613  LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            + I+G  KEAI LF E+  TG  PD +TF  +L AC +SGL+ EG +Y D M + + + P
Sbjct: 673  YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFI-RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
             ++HY+C++D+LG+AG LD+A   +   M  + D  IW +LL SCRIH +LE  E  + +
Sbjct: 733  NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            LF+LEP    NY L+ NL A   +WEDV ++R  M+E+ ++     SWI++++ V  F  
Sbjct: 793  LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF-- 850

Query: 958  EGAPHPATGEIYFELYHLVS------EMK--KLGYVPDTRCVYQDIDEEEKGKVLLSHTE 1009
                    GE + + +  +       EMK  K+GY PDT  V  D+ EEEK + L  H+E
Sbjct: 851  ------VVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 904

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            KLA+ YGL+KT     IRV KN R+C DCH AAK +S V  REI +RD  RFHHF+ G C
Sbjct: 905  KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVC 964

Query: 1070 SCNDCW 1075
            SC D W
Sbjct: 965  SCGDYW 970



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 245/598 (40%), Gaps = 123/598 (20%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           +LQA  K      G++IH  V  S  L ++  +C  +I+MY+     + +  VFD+++  
Sbjct: 90  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149

Query: 461 NLSSWNSMISSYT------------------------------------GLGYVDVAWSL 484
           NL  WN++ISSY+                                    G+  V +  ++
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG----------FRPNG-- 532
              +  + +  D+   N L+S + THG   + L L   M              F  NG  
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269

Query: 533 -----------------------SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                  +++  VL      R +  G+  HG+ ++  LD +L +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE--E 627
             +LMDMY K  C+ NAQ +F    N+N+V+WN+++ G+  +G       +L QM    E
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389

Query: 628 EIKPDLVS-----------------------------------WNSLVSGYSIWGQSKEA 652
           ++K D V+                                    N+ V+ Y+  G    A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449

Query: 653 LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
             + H +++      V +W +LI G  Q+ + R SL   +QM+   + P+S T+ SLL  
Sbjct: 450 QRVFHGIRSK----TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
           C  L  L+ GKE+H   ++N   +D +V   ++ +Y   G L + + +F    +K+L SW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK---NSGLVEEGWKY-FD 828
           N +I G+   G    A+ +F +++  G Q   I+   +  AC    +  L  E   Y   
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625

Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            +  D   I        ++D+  K G + ++      +  K  A+ W A++    IHG
Sbjct: 626 HLLEDDAFIAC-----SLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 677



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 145/617 (23%), Positives = 258/617 (41%), Gaps = 90/617 (14%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  ++K G +   D  V  +L+  Y   G  T A + F +   R+   W+S +  + S  
Sbjct: 210 HGLVVKTGLV--EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF-SDN 266

Query: 273 GEVQELLEVWGEL---HGKGVIFRS-RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
           G  +E   + GE+   +G G        L  +L +C +     LG  VH   +K   D +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           + L  ALM+ Y KC  + +A  +F ++++ ++ + WN ++              + R+M 
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385

Query: 389 FS--SAKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMY 441
                 KA   TI+  +  C     FHE      K++H Y LK     N  V N  ++ Y
Sbjct: 386 AGGEDVKADEVTILNAVPVC-----FHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           ++   L  A RVF  ++   ++SWN++I  +              + N  R+  D     
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA-------------QSNDPRLSLD----- 482

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
                H               M+  G  P+  +V  +L A ++L+ L+ G+E HG+I+RN
Sbjct: 483 ----AHLQ-------------MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
            L+ DL+V  S++ +Y+    L   Q +FD M+++++V+WN++I+GY   G    A  + 
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIH---------------HMKN 661
            QM    I+   +S   +    S+      G+   A  + H               + KN
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645

Query: 662 SGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
             I             +  +W ++I G   +   +E++K F +MQ+    P+  T   +L
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705

Query: 711 QTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK--SANK 767
             C   GL+  G + +  +    G   +      +IDM  ++G L  A  V  +  S   
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765

Query: 768 TLASWNCMIMGFAIYGN 784
            +  W  ++    I+ N
Sbjct: 766 DVGIWKSLLSSCRIHQN 782



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 161/331 (48%), Gaps = 14/331 (4%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L S+K  H   +K   ++N + +  + +  Y + G  + A + F    S++   W++ + 
Sbjct: 411 LPSLKELHCYSLKQEFVYN-ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI- 468

Query: 267 DYESFGGEVQE-----LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
                GG  Q       L+   ++   G++  S  +  +L  C+KL +  LG EVH  +I
Sbjct: 469 -----GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           +   + D+ +  ++++ Y  C ++ +   LF  + D +  + WN +I   L+N   + A+
Sbjct: 524 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVITGYLQNGFPDRAL 582

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            +FR+M     +    +++ +  AC+ + +   G++ H Y LK  LE +  +   LI MY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           ++N  +  +++VF+ +K+ + +SWN+MI  Y   G    A  LF +M  +   PD +T+ 
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPN 531
            +L+     G     L  L  M+ S G +PN
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 733


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/641 (34%), Positives = 346/641 (53%), Gaps = 37/641 (5%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            M+S+Y+ +G +      F++M  +    DI++WN L++ +  +  +       RGM   G
Sbjct: 1    MLSAYSQIGNIPAVRKAFDEMPVA----DIVSWNALIAAYIGNRDFDRCWLFFRGMLLQG 56

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P    +S+ L A T+ R +  GR     IL  G++ +  V T+L+ MY K     +A 
Sbjct: 57   INPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAA 116

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
             VF  M +R++VAW+++++ Y   G    A  +  QM+ + + P+ V+  S +   +  G
Sbjct: 117  SVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLG 176

Query: 648  QSKEALVIIHHMKNSGIYP-------------------------------NVVTWTSLIS 676
              +   ++   ++  GI                                 NVV W+++ +
Sbjct: 177  DLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISA 236

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH--CLCLKNGF 734
               +N+  R++++   +M  E + PNSTT  S+L  C  +  L+ G+ IH     L  G 
Sbjct: 237  AYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGL 296

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              D YV T L++MYSK GNL  A ++F K A+  L  WN +I   A +G  ++A+ LF  
Sbjct: 297  ESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFER 356

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +   G QP  ITFT++L AC ++G++++G K+F S   D+ I P  EH+ CMVDLLG+AG
Sbjct: 357  MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 416

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
            ++ ++ D +  MPF+P    W A LG+CR + +++ A  A+  LF+L+P   A Y L+ N
Sbjct: 417  WIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSN 476

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A + RW DV R+R +M           SWI++   VH F +    HP  GEI+ EL  
Sbjct: 477  MYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQR 536

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            L   MK+ GYVPDT  V  D+ +E K  ++  H+EKLA+ + L+ T   +PIRV+KN RV
Sbjct: 537  LTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRV 596

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C+DCHTA+K++S +  REI +RD  RFH F+ G CSC D W
Sbjct: 597  CNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 143/292 (48%), Gaps = 5/292 (1%)

Query: 216 QMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
           Q+  +G     + +V++ L+  Y + G  T AA  F     R    WS+ +  Y +  G 
Sbjct: 84  QLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAY-ARNGH 142

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            +E L ++ ++   GV      L   L  C  L     G  +H  +  +G    V +  A
Sbjct: 143 PREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTA 202

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L+N YGKC  +E+A + F ++ + ++ + W+ I     RN++  +AI++   M       
Sbjct: 203 LVNLYGKCGRIEAAVEAFGQIVE-KNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVP 261

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIH--GYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            S T V +L ACA + A  +G++IH    VL   LES++ V   L++MYS+   L LA  
Sbjct: 262 NSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGD 321

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           +FD +   +L  WNS+I++    G  + A  LF +M    +QP IIT+  +L
Sbjct: 322 MFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVL 373



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 189/436 (43%), Gaps = 46/436 (10%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG---KGVIFR 293
           Y + G+  +  KAF          W++ +  Y   G   ++    W    G   +G+   
Sbjct: 5   YSQIGNIPAVRKAFDEMPVADIVSWNALIAAY--IGN--RDFDRCWLFFRGMLLQGINPG 60

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
              ++I L  CT      +G  +  +++  G + +  ++ AL++ YGK      A  +F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
            +S   D + W+ ++    RN     A+ LFR+M          T+V  L ACA +G   
Sbjct: 121 RMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G  +H  V    ++S + V   L+++Y +  ++E A   F  + + N+ +W+++ ++Y 
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYA 239

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                       N  N                        ++ + +L  M   G  PN +
Sbjct: 240 -----------RNDRN------------------------RDAIRVLHRMDLEGLVPNST 264

Query: 534 SVSVVLQAVTELRLLKYGRESH--GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
           +   VL A   +  LK GR  H    +L  GL+ D+YV T+L++MY K   L  A ++FD
Sbjct: 265 TFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFD 324

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
            + + ++V WNSLI+     G    A ++  +M  E ++P ++++ S++   S  G   +
Sbjct: 325 KIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQ 384

Query: 652 ALV-IIHHMKNSGIYP 666
                +  + + GI+P
Sbjct: 385 GRKHFVSFIGDHGIFP 400



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/517 (19%), Positives = 205/517 (39%), Gaps = 106/517 (20%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           +++ Y +  ++ +  K F E+  + D + WN +I   + N  ++     FR M       
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMP-VADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINP 59

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               I   L AC        G+ I   +L + +E    V   L+SMY +      A  VF
Sbjct: 60  GEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVF 119

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
             M   ++ +W++M+++Y   G+   A  LF +M+   + P+ +T   L+SG        
Sbjct: 120 LRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVT---LVSG-------- 168

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                                   L A   L  L+ G   H  +   G+   + VGT+L+
Sbjct: 169 ------------------------LDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALV 204

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           ++Y K   ++ A E F  +  +N+VAW+++ + Y       +A ++L++M+ E + P+  
Sbjct: 205 NLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNST 264

Query: 635 SWNSLVSGYSIWGQSKEA---------------------------------LVIIHHMKN 661
           ++ S++   +     K+                                  L +   M +
Sbjct: 265 TFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFD 324

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
              + ++V W SLI+ + Q+    ++L+ F +M+ E ++P   T +S+L  C   G+L  
Sbjct: 325 KIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQ 384

Query: 722 GKEIHCLCL--KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
           G++ H +     +G   +A     ++D+  ++G +  + ++                   
Sbjct: 385 GRK-HFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDL------------------- 424

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
                          LL   F+P  + + A L AC+ 
Sbjct: 425 ---------------LLHMPFEPHPVAWMAFLGACRT 446


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
            [Vitis vinifera]
          Length = 632

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/582 (36%), Positives = 324/582 (55%), Gaps = 39/582 (6%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            +P+   WN  L       S  + + L   ++     P+  + S VL+A   L  L  GR 
Sbjct: 90   KPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRI 149

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             HG + + G   +LY+   ++ +Y     +  A+ +F+ M  R++V WN +I+       
Sbjct: 150  LHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIA------- 202

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                 +++ Q + E               Y ++ +  E               NV +WTS
Sbjct: 203  -----QLIKQGDHE-------------GAYDLFSRMPER--------------NVRSWTS 230

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I+G +Q    +E++  F +M++  +K N  T+ ++L  C  LG L  G  IH    ++G
Sbjct: 231  MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            F ++  ++  LIDMY K G L+ A +VF +   +T+ SW+ MI G A++G  +EA+ LF 
Sbjct: 291  FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            ++ + G +P+ +TF  LL AC + GL+ EG ++F SM+ DY IIP IEHY CMVDLL +A
Sbjct: 351  DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRA 410

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L EA +FI  MP KP+  +WGALLG+CR+H ++E AE A + L +L+P N   Y ++ 
Sbjct: 411  GLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLS 470

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A + RWED  R+R  M +  VK    WS I +D +VH F A    HP T +I+    
Sbjct: 471  NIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWE 530

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L+ EM+  GYVP+T  V  DI+E EK K +  H+EKLA+V+GLM T +  PIR++KN R
Sbjct: 531  ELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLR 590

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +C DCH+A K +S +  REI +RD  RFH F +  CSC D W
Sbjct: 591  ICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/479 (23%), Positives = 215/479 (44%), Gaps = 25/479 (5%)

Query: 315 EVHASLIKRGFDFD------VHLKCALMNFYGKCRDVESANKLFSEVSDLEDD-LLWNEI 367
           +VHA +IK            V L CA    +        A ++F  V   + +  +WN  
Sbjct: 46  QVHAQIIKTNAPLSILPLTRVGLVCAFTPSF------HYAQQIFKCVEKQKPETFVWNSC 99

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           +      +   +AI LF  ++       + T   +L+AC  +     G+ +HG V K   
Sbjct: 100 LKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 159

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            SNL + N ++ +Y+   ++  A  +F+ M   ++ +WN MI+     G  + A+ LF++
Sbjct: 160 RSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSR 219

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M    ++    +W  +++G+   G  +  + L   M+  G + N  +V  VL A  +L  
Sbjct: 220 MPERNVR----SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L  G   H Y  R+G   ++ +  +L+DMYVK  CL+ A +VF+ M+ R +V+W+++I G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYP 666
               G    A ++ + M +  I+P+ V++  L+   S  G   E       M ++ GI P
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 395

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            +  +  ++    +     E+ +F + M    +KPN     +LL  C     ++  +E  
Sbjct: 396 QIEHYGCMVDLLSRAGLLHEAHEFILNM---PMKPNGVVWGALLGACRVHKNVEMAEEAI 452

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWNCMIMGFAIY 782
              L+   + D Y    L ++Y+++G   +    R+  +    K    W+ + +   ++
Sbjct: 453 KHLLELDPLNDGYYVV-LSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVH 510



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 3/219 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I   ++ GD   A   F     R+   W+S +  Y   G + +E + ++ ++   GV  
Sbjct: 200 MIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCG-KAKEAIHLFAKMEEAGVKC 258

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               +  +L  C  L A  LG+ +H    + GF  +V +   L++ Y KC  +E A K+F
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 318

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            E+ +    + W+ +I     + + E A++LF +M     +    T + +L AC+ +G  
Sbjct: 319 EEMEE-RTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLI 377

Query: 413 HEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELA 450
            EG++    + +   +   +    C++ + SR   L  A
Sbjct: 378 SEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEA 416


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 264/947 (27%), Positives = 464/947 (48%), Gaps = 107/947 (11%)

Query: 187  QLSCISSGF-CFLNETNKFRCLSSVKSKHAQMI-KMGKIWNSDDMVKSLIFHYLEFGDFT 244
            Q  C  S + C L    + R L   +  HA ++ +   + N   +   LI  + + G+  
Sbjct: 38   QGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLA 97

Query: 245  SAAKAFFLYFSRSYADWSSFLEDYESFGG-----EVQELLEVWGELHGKGVIFRSRILTI 299
             A +A    F+  Y+  ++ +  +   G      E+ + +EV    H          L  
Sbjct: 98   EA-EALADRFASVYS-CTAMIRAWMEHGRPDKAMELFDRMEVRPNCHA---------LIA 146

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV--SD 357
            ++  C+ L     G  +H+ +  R F+ +  L  AL++ Y KC  +  A + F  +  + 
Sbjct: 147  LVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRAS 206

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI-SRTIVKMLQACAKVG--AFHE 414
              D + WN +I   LRN     A++LFR+M    A    S T V +L +C + G  +  +
Sbjct: 207  KRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLED 266

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
             + IHG ++ + +E    V                                 +++ SY  
Sbjct: 267  VRAIHGRIVGAGIEREAFV-------------------------------RTALVDSYGK 295

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            LG +D AW +F +         ++T + ++S  + +G  Q  L L   M   G +P+G +
Sbjct: 296  LGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVT 355

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDY-----DLYVGTSLMDMYVKNDCLQNAQEV 589
            +  VL A +   +L+ G  +  ++L   ++      D  +GT+L+  Y +++ L  A+  
Sbjct: 356  LVSVLNACS---MLQVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARAT 411

Query: 590  FDNMKNRNIVAWNSLISGYC----------------FKGL------FVNA---------- 617
            FD +++ ++V+WN++ + Y                  +G+      F+ A          
Sbjct: 412  FDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQ 471

Query: 618  ------KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
                  K++ + +EE  ++ D    N+ ++ Y+  G   +A  +   +  S    + +TW
Sbjct: 472  TASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERI--SPARRDCITW 529

Query: 672  TSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
             S+++    +   +E+ + F  M+ E  +KPN  T  ++L        +  G+EIH   +
Sbjct: 530  NSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVV 589

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN--KTLASWNCMIMGFAIYGNGKEA 788
             NGF  D  +   L++MY+K G+L  A+ +F KS++  + + +W  +I G+A YG  + A
Sbjct: 590  SNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERA 649

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            + LF  + + G +P+ +TF + L AC + G +E+G +    M+ D+ I+P  +H+SC+VD
Sbjct: 650  LKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVD 709

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+ G LDEA   +     + D   W ALL +C+    LE  E  + R+ +L+P  +++
Sbjct: 710  LLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASS 768

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y ++ ++ A + RW +   +R +M + G+++    S ++++Q +H FSA    HP + EI
Sbjct: 769  YIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEI 828

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y EL  L   +K  GYV DT  V  D+ +E K ++L+ H+EKLAI +GLM T S +P+RV
Sbjct: 829  YLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRV 888

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IKN RVCSDCHTA K +S V GR+I +RD +R+HHF  G CSC D W
Sbjct: 889  IKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
            [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 245/768 (31%), Positives = 393/768 (51%), Gaps = 88/768 (11%)

Query: 315  EVHASLIKRGFDFDVHL-------KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
            +VHA +++   D    L        CAL +       ++ A  +F+ +   E  L  N  
Sbjct: 41   QVHAQILRSKLDRSTSLLVKLVISSCALSS------SLDYALSVFNLIPKPETHLC-NRF 93

Query: 368  IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
            +    R+E+ E  + ++  M+         +   +L+A ++V +  EG +IHG   K   
Sbjct: 94   LRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGF 153

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            +S+  V   L+ MY+   ++  A  +FD M                           F++
Sbjct: 154  DSDPFVQTGLVRMYAACGRIAEARLMFDKM---------------------------FHR 186

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
                    D++TW+ ++ G+   G + + L L   M++    P+   +S VL A      
Sbjct: 187  --------DVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGN 238

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L YG+  H +I+ N +  D ++ ++L+ MY     +  A  +F+ M  +N+VA  ++   
Sbjct: 239  LSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAM--- 295

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                            V+GYS  GQ + A  + + M    +  +
Sbjct: 296  --------------------------------VTGYSKLGQIENARSVFNQM----VKKD 319

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +V W+++ISG  ++++ +E+L  F +MQ   IKP+  TM S++  C  LG L   K IH 
Sbjct: 320  LVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHL 379

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
               KNGF     +   LI+MY+K G+L+ AR +F K   K + SW CMI  FA++G+   
Sbjct: 380  FVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGS 439

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+  FH++ +   +P+ ITF  +L AC ++GLVEEG K F SM  ++NI P   HY CMV
Sbjct: 440  ALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMV 499

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DL G+A  L EA + +  MP  P+  IWG+L+ +CR+HG +E  E A++RL +L+P +  
Sbjct: 500  DLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDG 559

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             +  + N+ A + RWEDV ++R  M   G+      S  +++  +H F      H    E
Sbjct: 560  AHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADE 619

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY +LY +VS++K +GY P+T  +  D++EEEK +V+L H+EKLA+ YGLM+  + + IR
Sbjct: 620  IYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIR 679

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +IKN RVC DCHT  K  S V  REI +RD  RFHH+++G CSC D W
Sbjct: 680  IIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 254/518 (49%), Gaps = 10/518 (1%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L+ +K  HAQ+++     ++  +VK +I           A   F L         + FL 
Sbjct: 36  LTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLR 95

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
           +  S   E ++ L V+  +  +G+         +LK  +++ +   G+E+H    K GFD
Sbjct: 96  EL-SRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFD 154

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D  ++  L+  Y  C  +  A  +F ++    D + W+ +I    ++  + +A+ LF E
Sbjct: 155 SDPFVQTGLVRMYAACGRIAEARLMFDKMFH-RDVVTWSIMIDGYCQSGLFNDALLLFEE 213

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+  + +     +  +L AC + G    GK IH +++++ +  +  + + L++MY+    
Sbjct: 214 MKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGS 273

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++LA  +F+ M   NL +  +M++ Y+ LG ++ A S+FN+M    ++ D++ W+ ++SG
Sbjct: 274 MDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQM----VKKDLVCWSAMISG 329

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
           +    S Q  L L   MQSLG +P+  ++  V+ A   L  L   +  H ++ +NG    
Sbjct: 330 YAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGA 389

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           L +  +L++MY K   L+ A+ +FD M  +N+++W  +IS +   G   +A +  +QME+
Sbjct: 390 LPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMED 449

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYR 685
           E I+P+ +++  ++   S  G  +E   I + M N   I P  V +  ++    +    R
Sbjct: 450 ENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLR 509

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           E+L+    M    + PN     SL+  C   G ++ G+
Sbjct: 510 EALELVEAMP---LAPNVIIWGSLMAACRVHGEIELGE 544


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 287/997 (28%), Positives = 473/997 (47%), Gaps = 127/997 (12%)

Query: 199  NETNKFRCLSSVKSKHAQMIKMGKIWNSDDM--VKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            +E ++++  SS+   +   +++ K   +DD+    +LI  Y+  G+  SA K F     +
Sbjct: 145  SEFDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQK 204

Query: 257  SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL--MAFWLGV 314
            +   WS  +  Y        E   ++  +   G++     +   L+ C +       LG+
Sbjct: 205  NLVSWSCLISGYTQ-NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGM 263

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCR-DVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            ++HA + K     D+ L   LM+ Y  C   ++ A+++F E+    + + WN II V  R
Sbjct: 264  QIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIK-FRNSVTWNSIISVYCR 322

Query: 374  NEKWENAIKLFREMQFSSAKAISRT----------------------IVKMLQACAKVGA 411
                 +A KLF  MQ    +   R                       + +ML    K G 
Sbjct: 323  RGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGF 382

Query: 412  FHE----GKQIHGY-----------VLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
              +       ++G+           + K   + N    N L+   +R ++ E A +VF  
Sbjct: 383  LRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKE 442

Query: 457  MKD-------------------------------------------HNLSSWNSMISSYT 473
            MKD                                             +S  N++++ Y 
Sbjct: 443  MKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYG 502

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                +D A S+F  M S     D ++WN ++SG   +  ++  ++    M+  G  P+  
Sbjct: 503  KCTAIDNACSVFQLMPSK----DTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNF 558

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            SV   L + + L  L  GR+ HG   + GLD D+ V  +L+ +Y + D +   Q+VF  M
Sbjct: 559  SVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM 618

Query: 594  KNRNIVAWNSLISGYC-FKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---VSGYSIWGQS 649
               + V+WNS I     ++   + A K   +M +   +P+ V++ ++   VS +S+ G  
Sbjct: 619  PEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG 678

Query: 650  KE--ALVIIHHMKNSGIYPNV---------------------------VTWTSLISGSLQ 680
             +  AL++ + + +     N                            V+W S+ISG L 
Sbjct: 679  HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLH 738

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            +    +++     M Q   K +  T +++L  C  +  L+ G E+H   ++     D  V
Sbjct: 739  SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVV 798

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             + L+DMY+K G +  A   F     + + SWN MI G+A +G+G++A+ +F  + + G 
Sbjct: 799  GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
             PD +TF  +L+AC + GLV+EG+K+F SM   Y + P IEH+SCMVDLLG+AG + +  
Sbjct: 859  SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIE 918

Query: 861  DFIRTMPFKPDATIWGALLGS-CRIHG-HLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            DFI+TMP  P+  IW  +LG+ CR +G + E  + A++ L +LEP N+ NY L+ N+ A 
Sbjct: 919  DFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAA 978

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
               WEDV   R +M +  VK     SW+ +   VH+F A    HP   +IY +L  L+++
Sbjct: 979  GGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNK 1038

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            ++  GYVP+T+    D++ E K ++L  H+EKLAI + L + KS  PIR++KN RVC DC
Sbjct: 1039 IRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTR-KSELPIRIMKNLRVCGDC 1097

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            HTA KY+S + GR+I LRD  RFHHF  G CSC D W
Sbjct: 1098 HTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 251/821 (30%), Positives = 404/821 (49%), Gaps = 86/821 (10%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVH-----LKCALMNFYGKCRDVESANKLFSE 354
            IL  C+ L A   G  VH  +++     D       L+  ++  Y +C   + A  +F  
Sbjct: 16   ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 355  VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK-MLQACAKVGAFH 413
            + D ++ + W  +I        + +A+ LFR+M  S       T    +L+   +     
Sbjct: 76   MKD-QNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLD 134

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            EGK++H +++++  E +  V N ++ MY +   +E A  VFDS++D              
Sbjct: 135  EGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD-------------- 180

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                                 P++ +W  +++ +  +G    VL LL  M   G +P+G 
Sbjct: 181  ---------------------PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGY 219

Query: 534  SVSVVLQAVTELRLLKYGRESHG-YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            + + VL A T +  L+  +  H   I   GLD D  VGT+L+++Y K   L+ A  VF  
Sbjct: 220  TFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQ 279

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW---------------- 636
            + N++IV+W+S+I+ +   G   +A ++L  M+ E ++P+ V++                
Sbjct: 280  IDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYG 339

Query: 637  -------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                               ++LV  Y  WG  + A  I    +      +VV+W+S+I+G
Sbjct: 340  KEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRER----DVVSWSSMIAG 395

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              QNE+   +L  F +M+ + ++PNS T  S +  C G+G L+ G ++H      G  KD
Sbjct: 396  YSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKD 455

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
              VAT L+++Y K G L+ A  VF     K L +W  + M +   G+G  ++ L H +  
Sbjct: 456  VPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMEL 515

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G +PD I F A+L +C  +G + +G  Y++ M+ D+ I P +EH  CMVD+LG+AG L+
Sbjct: 516  QGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLE 575

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
             A   I TM F+  +  W  LL +C+ H     A  A+ ++F+LEP N+  Y L+ ++  
Sbjct: 576  AAEQLINTMKFE-SSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFC 634

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA--PHPATGEIYFELYHL 975
             +  WE  E  R  MD  GV+ +L  S I+I   VH F A     PH   GEI+  L  L
Sbjct: 635  AAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKL 694

Query: 976  VSEMKKLGYVPDTRCV-YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
              EM+  GYVPD   V  +D++E  K   +  H+E LA+  G++ T +  P+R+ KN R+
Sbjct: 695  GREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRM 754

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CSDCH A K++S +  R I +RDG R HHF  G CSC D W
Sbjct: 755  CSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 221/475 (46%), Gaps = 42/475 (8%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFS 255
            L  + + R L   K  H+ +++ G  +  D MV +L+   Y + GD   A   F     
Sbjct: 123 LLKWSGRERNLDEGKRVHSHIMQTG--YEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            +   W+  +  Y    G   E+L +   ++  GV       T +L  CT + A      
Sbjct: 181 PNVFSWTIIIAAYAQ-NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKI 239

Query: 316 VHASLIKR-GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           +HA+ I   G D D  +  AL+N YGKC  +E A  +F ++ D +D + W+ +I    ++
Sbjct: 240 LHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQI-DNKDIVSWSSMIAAFAQS 298

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + ++AI+L   M     +  + T V +L+A   + AF  GK+IH  ++++    ++ + 
Sbjct: 299 GQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLT 358

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           + L+ MY     +E A  +F+S ++ ++ SW+SMI+ Y+       A SLF +M    +Q
Sbjct: 359 SALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQ 418

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           P+ +T+                                  VS +  A   +  L+ G + 
Sbjct: 419 PNSVTF----------------------------------VSAI-DACAGVGALRRGTQL 443

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H  +   GLD D+ V T+L+++Y K   L+ A+ VF  MK +N++ W S+   Y   G  
Sbjct: 444 HERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHG 503

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNV 668
             + K+L+ ME + +KPD + + +++   +  GQ  + L   + M ++ GI P V
Sbjct: 504 SRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAV 558



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 164/329 (49%), Gaps = 38/329 (11%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD-----MY 577
           M++   +   S+ + +L A ++LR L  G+  HG ++R  L  D     SL++     MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
           ++  C   A +VFD MK++N+VAW SLIS + F G F +A  +  +M    + PD +++ 
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 638 SLVSGYSIWGQSKEALVIIH-HMKNSG-------------IY------------------ 665
           S++  +S   ++ +    +H H+  +G             +Y                  
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           PNV +WT +I+   QN +  E L+   +M Q  +KP+  T +++L  C  +G L+  K +
Sbjct: 181 PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKIL 240

Query: 726 HCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
           H   + + G  +DA V T LI++Y K G L+ A  VF +  NK + SW+ MI  FA  G 
Sbjct: 241 HAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQ 300

Query: 785 GKEAILLFHELLETGFQPDAITFTALLAA 813
            K AI L   +   G +P+ +TF  +L A
Sbjct: 301 AKSAIQLLMLMDLEGVRPNNVTFVNVLEA 329



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 140/338 (41%), Gaps = 15/338 (4%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDD--MVKSLIFHYLEFGDFTSAAKAFFLYFS 255
           L      +     K  HA++++ G    SDD  +  +L+  Y  +G   +A   F     
Sbjct: 327 LEAVTSLKAFQYGKEIHARIVQAGY---SDDVCLTSALVKMYCNWGWVETARSIFESSRE 383

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R    WSS +  Y S        L ++ E+   GV   S      +  C  + A   G +
Sbjct: 384 RDVVSWSSMIAGY-SQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQ 442

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H  +   G D DV +  AL+N YGKC  +E A  +F  +   ++ L W  I M   +N 
Sbjct: 443 LHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKK-KNLLTWTSIAMAYGQNG 501

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS---ALESNLS 432
               ++KL   M+    K      V +L +C   G   +G  +H Y L +    +   + 
Sbjct: 502 HGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKG--LHYYNLMTQDFGIAPAVE 559

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            C C++ +  R  KLE A ++ ++MK  +  +W  ++++     + D A +        +
Sbjct: 560 HCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACK--AHNDTARAARAAEKIFQ 617

Query: 493 IQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGFR 529
           ++P   T   LLS  F   GS++      R M   G +
Sbjct: 618 LEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQ 655



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 49/244 (20%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD-----AYVATGLIDMY 748
           M+  +I+   +  +++L  C  L  L  GK +H L ++   ++D     + +   +I MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
            + G    A +VF +  ++ + +W  +I  F   G+  +A++LF ++L +G  PD ITFT
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 809 ALLAACKNS------------------------------------GLVEEGWKYFDSMST 832
           ++L                                          G VE+    FDS+  
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180

Query: 833 DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM---PFKPDATIWGALLGSCRIHGHLE 889
                P +  ++ ++    + G+  E    +  M     KPD   +  +LG+C   G LE
Sbjct: 181 -----PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALE 235

Query: 890 YAEI 893
            A+I
Sbjct: 236 EAKI 239


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/660 (32%), Positives = 366/660 (55%), Gaps = 36/660 (5%)

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            ++  ++  S   HN    NS++++Y   G +  A  +F+         ++++W  L+SG 
Sbjct: 42   QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTP----YKNVVSWTILISGL 97

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              +  +   + + R M    F+PN  ++S VL A   L L++  +  H + +R G + ++
Sbjct: 98   AKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNV 157

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +V T+L+DMY K  C+  A+++F++M  RN+V WN+++SGY   G    A  + N M  +
Sbjct: 158  FVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRK 217

Query: 628  EIKPDLVSWNSLV---------------------SGYSIWGQSKEALVII---------- 656
             +  D  +  SL+                     +GY      K AL+ I          
Sbjct: 218  GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGG 715
            H + +     +V  WT +++G     ++  ++K F +M   +++K +S  +  +L +C  
Sbjct: 278  HRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSH 337

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
             G LQ G+ +H L +K  F  + +V + +IDMY+  GNL+ A+  F     K +  WN M
Sbjct: 338  SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I G  + G G +AI LF ++  +G  PD  TF ++L AC ++G+V EG + F  M    +
Sbjct: 398  IAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            +IP ++HY+C++D+LG+AG LD A+ FI  MPF+PD  ++  LLG+CRIHG+++     S
Sbjct: 458  VIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEIS 517

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            +++F++EP ++  Y L+ N+ A++  WE V+  R S+    +K    +S I+I+Q ++ F
Sbjct: 518  QKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTF 577

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    HP   +I   L  L+ ++KK GYVP+T  + QD+ ++ K  +L  H+EK+AI +
Sbjct: 578  MAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAF 637

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GLM+TK    IR+ KN R C DCHTA+K++S V GR + ++D  RFH F++G CSC D W
Sbjct: 638  GLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/542 (23%), Positives = 234/542 (43%), Gaps = 103/542 (19%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +I  G   +  L  +LMN Y  C  +  A ++F   +  ++ + W  +I    +N
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHH-TPYKNVVSWTILISGLAKN 100

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           + +  AI +FREM   + K  + TI  +L A A +G     K +H + ++   E N+ V 
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+ MYS+   + +A ++F+SM + N+ +WN+++S Y+  G+ + A  LFN M    + 
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            D  T                +++L+    S+G                    L+ G   
Sbjct: 221 VDFYT----------------IMSLIPASLSVG-------------------CLQVGTGI 245

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           HG+I+R G + D ++ T+LMD+YV ++C+ +A  VF  M  +++ AW  +++G+     +
Sbjct: 246 HGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHW 305

Query: 615 VNAKKMLNQMEE-EEIKPDLVSWNSLV-----SGYSIWGQSKEALVIIHHMKNS------ 662
             A K  N+M   + +K D ++   ++     SG    G+   AL I     N+      
Sbjct: 306 DRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSA 365

Query: 663 --GIYPN------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
              +Y N                  VV W ++I+G+  N    +++  F+QM+   + P+
Sbjct: 366 VIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPD 425

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNG-FIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +T  S+L  C   G++  G +I    +K    I +      +ID+  ++G L +A    
Sbjct: 426 ESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFI 485

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                                                 FQPD   ++ LL AC+  G ++
Sbjct: 486 NNMP----------------------------------FQPDFDVYSTLLGACRIHGNIK 511

Query: 822 EG 823
            G
Sbjct: 512 LG 513



 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 137/586 (23%), Positives = 257/586 (43%), Gaps = 49/586 (8%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
           K + L  ++  HAQ+I  G   N+  +  SL+  Y+  G    A + F     ++   W+
Sbjct: 33  KLKDLKPLQQIHAQIITSGLTHNTF-LSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWT 91

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASL 320
             +         V E ++V+ E+      F+   +TI  +L     L    +   VH   
Sbjct: 92  ILISGLAKNDCFV-EAIDVFREMIMGN--FKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++ GF+ +V ++ AL++ Y K   +  A +LF  +S+  + + WN I+     +   E A
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE-RNVVTWNAIVSGYSDHGFSEEA 207

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           I LF  M+         TI+ ++ A   VG    G  IHG+++++  E++  +   L+ +
Sbjct: 208 IDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDI 267

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y  +N ++ A RVF  M   ++++W  M++ ++   + D A   FNKM            
Sbjct: 268 YVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM------------ 315

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                                G+Q+L  + +  ++  +L + +    L+ GR  H   ++
Sbjct: 316 --------------------LGIQNL--KLDSIALMGILSSCSHSGALQQGRRVHALAIK 353

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
                +++VG++++DMY     L++A+  F  M  +++V WN++I+G    G   +A  +
Sbjct: 354 TCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDL 413

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSL 679
             QM+   + PD  ++ S++   S  G   E L I +HM K S + PN+  +  +I    
Sbjct: 414 FLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILG 473

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
           +      +  F   M     +P+    S+LL  C   G ++ G EI     +     DA 
Sbjct: 474 RAGQLDAAYSFINNMP---FQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEME-PNDAG 529

Query: 740 VATGLIDMYSKSGN---LKSAREVFRKSANKTLASWNCMIMGFAIY 782
               L +MY+ +GN   +K  R   R    K    ++ + +   IY
Sbjct: 530 YYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIY 575



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 179/376 (47%), Gaps = 34/376 (9%)

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
           +L+ LK  ++ H  I+ +GL ++ ++  SLM+ YV    L +A+++F +   +N+V+W  
Sbjct: 33  KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTI 92

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK------------- 650
           LISG      FV A  +  +M     KP+ V+ +S++  ++  G  +             
Sbjct: 93  LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152

Query: 651 --------EALV----------IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
                    ALV          +   +  S    NVVTW +++SG   +    E++  F 
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
            M+++ +  +  T+ SL+     +G LQ G  IH   ++ G+  D ++ T L+D+Y    
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITFTALL 811
            +  A  VF + + K +A+W  M+ GF+   +   AI  F+++L     + D+I    +L
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
           ++C +SG +++G +   +++        I   S ++D+    G L++A  F   M  K D
Sbjct: 333 SSCSHSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEK-D 390

Query: 872 ATIWGALLGSCRIHGH 887
              W A++    ++G+
Sbjct: 391 VVCWNAMIAGNGMNGY 406


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like
            [Glycine max]
          Length = 640

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/683 (34%), Positives = 364/683 (53%), Gaps = 55/683 (8%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV-----CNCLISMYSRNNKLELATRVF 454
            V +L  C+   +    KQIH  + K+ L ++  V      +C I++   ++ L  A R+F
Sbjct: 6    VSLLSKCS---SLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITI---SDALHYALRLF 59

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
                + +    N++I S   L       S  +     R QP +                 
Sbjct: 60   HHFPNPDTFMHNTLIRS---LSLSQTPLSSLHPFIQLRRQPTL----------------- 99

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                           P+  + +  L+AV   R L+ G + H    R+G D  ++VGT+L+
Sbjct: 100  --------------SPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLI 145

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
             MY +     +A+ VFD M   N+V WN++++     G    A+ +   M       +L 
Sbjct: 146  SMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVR----NLT 201

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
            SWN +++GY+  G+   A  + + M       + V+W+++I G   N  + E+  FF ++
Sbjct: 202  SWNGMLAGYAKAGELGLARRVFYEMP----LRDEVSWSTMIVGFAHNGCFDEAFGFFREL 257

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
             +E+I+ N  +++ +L  C   G  + GK +H    K GF+    V   LID YSK GN+
Sbjct: 258  LREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNV 317

Query: 755  KSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
              AR VF+     +++ SW  +I G A++G G+EAI LFHE+ E+G +PD ITF +LL A
Sbjct: 318  AMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYA 377

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C +SGLVEEG   F  M   Y I P IEHY CMVDL G+A  L +A++FI  MP  P+A 
Sbjct: 378  CSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAI 437

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            IW  LLG+C IHG++E AE+   RL +++P NS ++ L+ N+ A++ +W+DV  +R +M 
Sbjct: 438  IWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMT 497

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK-KLGYVPDTRCVY 992
            E  +K    WS I+ID++++ F A   P+  T E + +L  ++  ++ + GY P  R V 
Sbjct: 498  EHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVL 557

Query: 993  QDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGRE 1052
             DI+EEEK   +  H+EKLA  +G+ K      +R++KN RVC DCHT  K +S V   E
Sbjct: 558  HDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVE 617

Query: 1053 IFLRDGARFHHFREGECSCNDCW 1075
            I +RD +RFH F++G CSC D W
Sbjct: 618  IIVRDRSRFHSFKDGFCSCRDYW 640



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 187/438 (42%), Gaps = 45/438 (10%)

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           I+L R+   S     S T    L+A A       G Q+H    +   ++++ V   LISM
Sbjct: 91  IQLRRQPTLSPD---SFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISM 147

Query: 441 YSRNNKLELATRVFDSMKD-------------------------------HNLSSWNSMI 469
           Y+       A RVFD M +                                NL+SWN M+
Sbjct: 148 YAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGML 207

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           + Y   G + +A  +F +M       D ++W+ ++ G   +G +       R +     R
Sbjct: 208 AGYAKAGELGLARRVFYEMPLR----DEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIR 263

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
            N  S++ VL A  +    ++G+  HG++ + G  Y   V  +L+D Y K   +  A+ V
Sbjct: 264 TNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLV 323

Query: 590 FDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           F NM   R+IV+W S+I+G    G    A ++ ++MEE  ++PD +++ SL+   S  G 
Sbjct: 324 FQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGL 383

Query: 649 SKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
            +E   +   MKN  GI P +  +  ++    +    +++ +F  +M    + PN+    
Sbjct: 384 VEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMP---VSPNAIIWR 440

Query: 708 SLLQTCGGLGLLQNGKEIHCLC--LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
           +LL  C   G ++  + +      +      D  + + +  +  K  ++ S R    + +
Sbjct: 441 TLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHS 500

Query: 766 NKTLASWNCMIMGFAIYG 783
            K    W+ + +   IYG
Sbjct: 501 MKKTPGWSMIEIDKVIYG 518



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 14/294 (4%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G+   A + F+    R    WS+ +  + +  G   E    + EL  + +      
Sbjct: 210 YAKAGELGLARRVFYEMPLRDEVSWSTMIVGF-AHNGCFDEAFGFFRELLREEIRTNEVS 268

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +L  C +  AF  G  +H  + K GF +   +  AL++ Y KC +V  A  +F  + 
Sbjct: 269 LTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMP 328

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG- 415
                + W  II     +   E AI+LF EM+ S  +    T + +L AC+  G   EG 
Sbjct: 329 VARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGC 388

Query: 416 ----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS 470
               K  + Y ++ A+E       C++ +Y R  +L+ A      M    N   W +++ 
Sbjct: 389 GLFSKMKNLYGIEPAIEHY----GCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLG 444

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT-HGSYQNVLTLLRGM 523
           + +  G +++A  +  K   + + PD    + LLS  +   G +++V ++ R M
Sbjct: 445 ACSIHGNIEMAELV--KARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTM 496


>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/713 (33%), Positives = 385/713 (53%), Gaps = 55/713 (7%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+ C+K     L  ++H+ +I  G      L   +++ Y     V  A ++F EVS +E
Sbjct: 878  LLQQCSK---SHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVSPIE 933

Query: 360  ---DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
               + LLWN I+   + +   E A++++  M+     A   T   +++ACA +G+    +
Sbjct: 934  CFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCR 993

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
             +HG+V++   + NL V N L+ MY +  +++ A +VF+ M   +  SWN+M+S Y  L 
Sbjct: 994  SVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGY-ALN 1052

Query: 477  Y-VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            Y    A  +F  M S+ ++P+++TW  LLS H   G +   + L   M+  G      ++
Sbjct: 1053 YDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEAL 1112

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            +VVL    +L     G+  HGY+++ G +  L+V  SL+ +Y K+  +  A+ +F  +K 
Sbjct: 1113 AVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKT 1172

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            +NIV                                   SWN+L+S Y+  G   EA  I
Sbjct: 1173 KNIV-----------------------------------SWNALISSYADLGWCDEAFAI 1197

Query: 656  IHHMKNSGIYP----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
               ++ +  YP    NVV+W+++I G        E+L+ F +MQ   +K NS T++S+L 
Sbjct: 1198 FLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLS 1257

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             C  L  L  G+EIH   +++    +  V  GLI+MY+KSG+ K    VF K  NK L S
Sbjct: 1258 VCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLIS 1317

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            WN M+ G+ I+G G+ AI  F ++++ GF+PD +TF A+L+AC ++GLV EG + FD M 
Sbjct: 1318 WNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMI 1377

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             ++ + P +EHY+CMVDLLG+AG L EA   +++MP +P+A +WGALL SCR+H + E A
Sbjct: 1378 KEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVA 1437

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E  + ++F L    + +Y L+ N+ A S RWED  ++R S    G+K     SWIQ+ + 
Sbjct: 1438 EETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKK 1497

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            V++FSA    H    E+Y  L  L  +M+  GY+P       DIDEE++  +L
Sbjct: 1498 VYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIP-------DIDEEQRSILL 1543



 Score =  209 bits (531), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 264/542 (48%), Gaps = 47/542 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYES 270
            H+Q+I  G    S  +   ++  Y  FG  + A + F +     +++   W+S L    +
Sbjct: 892  HSQIIVTGS-HRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVA 950

Query: 271  FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G   +E LE++  +   GV        ++++ C  + +  L   VH  +++ GF +++H
Sbjct: 951  HG-YCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLH 1009

Query: 331  LKCALMNFYGKCRDVESANKLFSEVS---------------------------------D 357
            +   LM  YGK   ++ A K+F  ++                                  
Sbjct: 1010 VGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAG 1069

Query: 358  LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            LE +L+ W  ++    R  +    ++LF  M+     A +  +  +L     + AF EGK
Sbjct: 1070 LEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGK 1129

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
             IHGYV+K   E+ L V N LI +Y ++  +  A  +F  +K  N+ SWN++ISSY  LG
Sbjct: 1130 VIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLG 1189

Query: 477  YVDVAWSLFNKMNSSR----IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
            + D A+++F ++  +     ++P++++W+ ++ G  + G  +  L L R MQ    + N 
Sbjct: 1190 WCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANS 1249

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             +++ VL    EL  L  GRE HG+++R+ +D ++ VG  L++MY K+   +    VF+ 
Sbjct: 1250 VTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEK 1309

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
            ++N+++++WN++++GY   GL  NA +  +QM ++  +PD V++ +++S  S  G   E 
Sbjct: 1310 IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEG 1369

Query: 653  LVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
              +   M K   + P +  +  ++    +    +E+ K    M    ++PN+    +LL 
Sbjct: 1370 RELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP---VEPNACVWGALLN 1426

Query: 712  TC 713
            +C
Sbjct: 1427 SC 1428


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 953

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 280/895 (31%), Positives = 434/895 (48%), Gaps = 104/895 (11%)

Query: 226  SDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
            SDD++   +I  Y   G    +  AF    S++   W++ +  Y S      E+LE++ +
Sbjct: 118  SDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSY-SRNELYHEVLEMFIK 176

Query: 285  LHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            +  K  +         ++K C  +    +G+ VH  ++K G   D+ +  AL++FYG   
Sbjct: 177  MISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHG 236

Query: 344  DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKM 402
             V  A KLF               IM +     W + I++F +     A      T+V +
Sbjct: 237  FVSDALKLFD--------------IMPERNLVSWNSMIRVFSDNGDDGAFMPDVATVVTV 282

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            L  CA+      GK +HG+ +K +L+  L V N L+ MYS+                   
Sbjct: 283  LPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSK------------------- 323

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
              W  +I S            +  K+N+++   ++++WN ++ G    G       LLR 
Sbjct: 324  --WGCIIDS-----------QMIFKLNNNK---NVVSWNTMVGGFSAEGDIHGTFDLLRQ 367

Query: 523  MQSLGFRPNGSSVSVVLQAVT---ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
            M + G     +    +L AV    +  +L   +E H Y L+    YD  +  + +  Y K
Sbjct: 368  MLA-GSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAK 426

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
               L  AQ VF  ++++ + +WN+LI GY        +     QM+   + PD  +  SL
Sbjct: 427  CGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSL 486

Query: 640  VSGYSIW-----GQSKEALVIIHHM-KNSGIYPNV------------------------- 668
            +S  S       G+     +I + + ++  +Y +V                         
Sbjct: 487  LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSL 546

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            V+W ++I+G LQN     +L  F QM    I+P   +M ++   C  L  L+ G+E H  
Sbjct: 547  VSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAY 606

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             LK+    +A++A  +IDMY+K+G +  + +VF     K+ ASWN MIMG+ ++G  KEA
Sbjct: 607  ALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEA 666

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            I LF E+  TG  PD +TF  +L AC +SGL+ EG +Y D M + + + P ++HY+C++D
Sbjct: 667  IKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVID 726

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            +LG+AG LD A      M  +PD  IW +LL  CRIH +LE  E  + +LF LEP    N
Sbjct: 727  MLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPEN 786

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y L+ NL A   +W+DV ++R  M E+ ++     SWI+++  V  F          GE 
Sbjct: 787  YVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSF--------VVGER 838

Query: 969  YFELYHLVS------EMK--KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
            + + +  +       EMK  K+GY PDT  V  D+ EEEK + L  H+EKLAI YGL+KT
Sbjct: 839  FLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKT 898

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                 +RV KN R+C DCH AAK +S V  REI +RD  RFHHF +G CSC D W
Sbjct: 899  SEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 134/608 (22%), Positives = 252/608 (41%), Gaps = 89/608 (14%)

Query: 214 HAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
           H  ++K G +   +D+    +L+  Y   G  + A K F +   R+   W+S +  +   
Sbjct: 210 HGLVVKTGLV---EDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN 266

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G +   + +V               +  +L +C +     +G  VH   +K   D ++ +
Sbjct: 267 GDDGAFMPDV-------------ATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVV 313

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             ALM+ Y K   +  +  +F ++++ ++ + WN ++              L R+M   S
Sbjct: 314 NNALMDMYSKWGCIIDSQMIF-KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGS 372

Query: 392 --AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              KA   TI+  +  C         K++H Y LK     +  + N  ++ Y++   L  
Sbjct: 373 EDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSY 432

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A RVF  ++   L+SWN++I  Y              + +  R+          L  H  
Sbjct: 433 AQRVFHGIRSKTLNSWNALIGGYA-------------QSSDPRLS---------LDAHLQ 470

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                        M++ G  P+  +V  +L A ++L+ L+ G+E HG+I+RN L+ DL+V
Sbjct: 471 -------------MKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 517

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             S++ +Y+    L   Q +FD M++ ++V+WN++I+G+   G    A  +  QM    I
Sbjct: 518 YLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGI 577

Query: 630 KPDLVSWNSLVSGYSI-----WGQSKEALVIIH---------------HMKNSGIY---- 665
           +P  +S  ++    S+      G+   A  + H               + KN  I     
Sbjct: 578 QPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSK 637

Query: 666 -------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                   +  +W ++I G   +   +E++K F +MQ+    P+  T   +L  C   GL
Sbjct: 638 VFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGL 697

Query: 719 LQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWNCMI 776
           L  G + +  +    G   +      +IDM  ++G L +A R     S    +  WN ++
Sbjct: 698 LHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLL 757

Query: 777 MGFAIYGN 784
               I+ N
Sbjct: 758 SWCRIHQN 765



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 162/328 (49%), Gaps = 8/328 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L S+K  H   +K   +++ + +  + +  Y + G  + A + F    S++   W++ + 
Sbjct: 395 LPSLKELHCYSLKQEFVYD-ELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIG 453

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y     + +  L+   ++   G++  +  +  +L  C+KL +  LG EVH  +I+   +
Sbjct: 454 GYAQ-SSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 512

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL--WNEIIMVKLRNEKWENAIKLF 384
            D+ +  ++++ Y  C ++ +   LF     +ED+ L  WN +I   L+N   E A+ LF
Sbjct: 513 RDLFVYLSVLSLYIHCGELCTVQVLFDA---MEDNSLVSWNTVITGHLQNGFPERALGLF 569

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           R+M     +    +++ +  AC+ + +   G++ H Y LK  LE N  +   +I MY++N
Sbjct: 570 RQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKN 629

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +  +++VF+ +K+ + +SWN+MI  Y   G    A  LF +M  +   PD +T+  +L
Sbjct: 630 GAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVL 689

Query: 505 SGHFTHGSYQNVLTLLRGMQ-SLGFRPN 531
           +     G     L  L  M+ S G +PN
Sbjct: 690 TACNHSGLLHEGLRYLDQMKSSFGLKPN 717



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 135/304 (44%), Gaps = 23/304 (7%)

Query: 534 SVSVVLQAVTELRLLKYGRESHGYIL-RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
           ++ ++LQA  + + ++ GR+ H  +     L  D  + T ++ MY       +++  FD 
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKE 651
           ++++N+  WN++IS Y    L+    +M  +M  +  + PD  ++  ++   +       
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGI 205

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI------------ 699
            L +   +  +G+  ++    +L+S    +    ++LK F  M + ++            
Sbjct: 206 GLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSD 265

Query: 700 -------KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
                   P+  T+ ++L  C     +  GK +H   +K    K+  V   L+DMYSK G
Sbjct: 266 NGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWG 325

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL--ETGFQPDAITFTAL 810
            +  ++ +F+ + NK + SWN M+ GF+  G+      L  ++L      + D +T    
Sbjct: 326 CIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNA 385

Query: 811 LAAC 814
           +  C
Sbjct: 386 VPVC 389


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/556 (38%), Positives = 325/556 (58%), Gaps = 31/556 (5%)

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            G++ H  +L+ G ++D++V  SL+ MY +   + +A+++FD+M  R+  +WN++ISGYC 
Sbjct: 13   GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQ 72

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALVIIHHMKNSGIY 665
             G    A  + ++M  E +K D ++  S++      G  + G+     VI H ++     
Sbjct: 73   NGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFV 132

Query: 666  PN-------------------------VVTWTSLISGSLQNENYRESLKFFIQMQQ-EDI 699
             N                         VV+W +LI+G  QN    E+++ ++ M++ E+I
Sbjct: 133  SNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEI 192

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
             PN  T  S+L     +G LQ G  IH   +KN    D +V T LIDMY K G L  A  
Sbjct: 193  IPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAIS 252

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            +F +   K    WN MI  + ++G+G++A+ LF E+     +PD ITF +LL+AC +SGL
Sbjct: 253  LFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGL 312

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            V +    F+ M  +Y I P+++HY CMVDL G+AG L+ A++FI+ MP +PDA+ WGALL
Sbjct: 313  VSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALL 372

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             +CRIHG++E  + AS RLF+++  N   Y L+ N+ A   +WE V+ +R    + G++ 
Sbjct: 373  NACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRK 432

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
               WS I ++  V VF      HP   EIY EL  L S++K +GYVPD   V QD++E+E
Sbjct: 433  NPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDE 492

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K  +L+ H+E+LAI YG++ T  + PIR+ KN RVC DCHT  K++S++  REI +RD +
Sbjct: 493  KEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSS 552

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF+ G CSC D W
Sbjct: 553  RFHHFKGGTCSCGDYW 568



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 202/426 (47%), Gaps = 45/426 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ++K C  L+    G ++H  ++K GF++DV +  +L++ Y +   V  A KLF ++    
Sbjct: 3   VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMP-AR 58

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D   WN +I    +N     A+ +  EM+    K  + T+  +L  CA+VG    GK IH
Sbjct: 59  DRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIH 118

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            YV+K  LE  L V N LI+MY++   L  A +VF                   GL    
Sbjct: 119 LYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-------------------GL---- 155

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVV 538
                        +  D+++WN L++G+  +G     + +   M+      PN  +   +
Sbjct: 156 -------------LIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSI 202

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           L A + +  L+ G   HG +++N L  D++VGT L+DMY K   L +A  +F  +  +N 
Sbjct: 203 LPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNS 262

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           V WN++IS Y   G    A ++  +M+ E +KPD +++ SL+S  S  G   +A    + 
Sbjct: 263 VPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNM 322

Query: 659 MKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
           M+   GI P++  +  ++    +      +  F  +M    I+P+++   +LL  C   G
Sbjct: 323 MEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP---IQPDASAWGALLNACRIHG 379

Query: 718 LLQNGK 723
            ++ GK
Sbjct: 380 NIELGK 385



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 5/296 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  H  ++K+G  W+   +  SL+  Y  FG    A K F    +R    W++ +  Y  
Sbjct: 14  KKIHCLVLKLGFEWDVF-VAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQ 72

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G   E L++  E+  +GV   +  +  +L +C ++     G  +H  +IK G +F++ 
Sbjct: 73  -NGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELF 131

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  AL+N Y K   +  A K+F  +  ++D + WN +I    +N     AI+++  M+  
Sbjct: 132 VSNALINMYAKFGSLGHAQKVFGLL--IKDVVSWNTLITGYAQNGLASEAIEVYLLMEEH 189

Query: 391 SAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                ++ T V +L A + VGA  +G +IHG V+K+ L S++ V  CLI MY +  KL+ 
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDD 249

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
           A  +F  +   N   WN+MIS Y   G  + A  LF +M + R++PD IT+  LLS
Sbjct: 250 AISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLS 305



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           +++ CG L    +GK+IHCL LK GF  D +VA  L+ MYS+ G +  AR++F     + 
Sbjct: 3   VVKACGDL---LDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
             SWN MI G+   GN  EA+ +  E+   G + DAIT  ++L  C   G +  G
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSG 114


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 276/875 (31%), Positives = 427/875 (48%), Gaps = 115/875 (13%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY----------ESFGGEVQELLEV 281
            ++I  Y++ GD T A + F    SR  + W+S L  Y            F    +  L  
Sbjct: 132  AMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVS 191

Query: 282  WG---------ELHGKG-----VIFRSRILTIILKLCTKLMAF-WLG-VEVHASL----I 321
            W          E HGK       + R  +L       + L A   LG ++V  SL    +
Sbjct: 192  WTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL 251

Query: 322  KRGFDFDVHLKCALMNFYGKCRDV-ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            K GF+ DV +  A++N Y +   V ++A K F  + +  ++  W+ +I       + + A
Sbjct: 252  KTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIE-RNEYTWSTMIAALSHGGRIDAA 310

Query: 381  IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
            I ++            R  VK + AC                 ++AL + L+ C      
Sbjct: 311  IAVYE-----------RDPVKSI-AC-----------------RTALITGLAQCG----- 336

Query: 441  YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
                 +++ A  +F+ + +  + SWN++I+ Y   G V+ A  LF+KM       + I+W
Sbjct: 337  -----RIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR----NTISW 387

Query: 501  NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
              +++G+  +G  +  L LL+ +   G  P+ SS++ +  A + +  L+ G + H   ++
Sbjct: 388  AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447

Query: 561  NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
             G  ++ +   +L+ MY K   ++ A++VF  M                           
Sbjct: 448  VGCQFNSFACNALITMYGKCRNMEYARQVFSRM--------------------------- 480

Query: 621  LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                    +  D+VSWNS ++         EA     +M    +  + V+WT++IS    
Sbjct: 481  --------VTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAH 528

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
             E   E++  F  M  E   PNS  ++ LL  CG LG  + G++IH + +K G   +  V
Sbjct: 529  AEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIV 588

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            A  LI MY K G   S R +F     + + +WN +I G+A +G G+EAI ++  +   G 
Sbjct: 589  ANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGV 647

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
             P+ +TF  LL AC ++GLV+EGWK+F SMS DY + P  EHY+CMVDLLG+ G +  A 
Sbjct: 648  LPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAE 707

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
             FI  MP +PD  IW ALLG+C+IH + E  + A+ +LF++EP N+ NY ++ N+ +   
Sbjct: 708  QFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLG 767

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
             W +V  +R  M + GV      SW QI   +H F      H    EI   L  L + +K
Sbjct: 768  MWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLK 827

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
              GYVPDT  V  DIDEE+K   LL H+EKLA+ Y L+ T    PI+++KN R+C DCHT
Sbjct: 828  ATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHT 887

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              K++S V  R+I +RDG RFHHFR G CSC D W
Sbjct: 888  FIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 246/548 (44%), Gaps = 60/548 (10%)

Query: 340 GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
           G+   V  A ++F  +    D + WN +I     N   + A  L+  +   +     RT 
Sbjct: 45  GRLGRVGEAREVFDAMPR-RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM----RTG 99

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
             +L    ++G   E ++    V    LE N    N +IS Y +N  + +A R+FD+M  
Sbjct: 100 AILLSGYGRLGRVLEARR----VFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPS 155

Query: 460 HNLSSWNSMISSYT-GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
            ++SSWNSM++ Y   L  VD A +LF KM     + ++++W  ++SG+    ++     
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVD-ARNLFEKMP----ERNLVSWTVMISGYGRIENHGKAWD 210

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           +   M   G  P+ S+ +  L AV  L  L          L+ G + D+ +GT+++++Y 
Sbjct: 211 IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270

Query: 579 KN-DCLQNAQEVFDNMKNRNIVAWNS-------------------------------LIS 606
           ++   L  A + F++M  RN   W++                               LI+
Sbjct: 271 RDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALIT 330

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
           G    G   +A+ +  Q+ E    P +VSWN+L++GY   G   EA  +   M     + 
Sbjct: 331 GLAQCGRIDDARILFEQIPE----PIVVSWNALITGYMQNGMVNEAKELFDKMP----FR 382

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           N ++W  +I+G  QN    E+L    ++ +  + P+ ++++S+   C  +  L+ G ++H
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
            L +K G   +++    LI MY K  N++ AR+VF +   K + SWN  +          
Sbjct: 443 SLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLD 502

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
           EA   F  +L      D +++T +++A  ++    E    F +M  ++  +P     + +
Sbjct: 503 EARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE-LPNSPILTIL 557

Query: 847 VDLLGKAG 854
           + + G  G
Sbjct: 558 LGVCGSLG 565



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/465 (22%), Positives = 195/465 (41%), Gaps = 93/465 (20%)

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           E  +S C+  I    R  ++  A  VFD+M   ++ +WNSMIS+Y   G  D A  L++ 
Sbjct: 31  ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           ++   ++   I                    LL G   LG                  R+
Sbjct: 91  ISGGNMRTGAI--------------------LLSGYGRLG------------------RV 112

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L+  R   G + RN + ++     +++  YV+N  +  A+ +FD M +R++ +WNS+++G
Sbjct: 113 LEARRVFDGMLERNTVAWN-----AMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTG 167

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
           YC     V+A+ +  +M E     +LVSW  ++SGY                        
Sbjct: 168 YCHSLQMVDARNLFEKMPER----NLVSWTVMISGYG----------------------- 200

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
                       + EN+ ++   F +M +E + P+ +  +S L    GLG L   + +  
Sbjct: 201 ------------RIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV 248

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGN-LKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
           L LK GF +D  + T ++++YS+  + L +A + F     +   +W+ MI   +  G   
Sbjct: 249 LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRID 308

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            AI ++    E          TAL+      G +++    F+ +       P +  ++ +
Sbjct: 309 AAIAVY----ERDPVKSIACRTALITGLAQCGRIDDARILFEQIPE-----PIVVSWNAL 359

Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           +    + G ++EA +    MPF+ +   W  ++     +G  E A
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAGYAQNGRSEEA 403


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/605 (36%), Positives = 322/605 (53%), Gaps = 47/605 (7%)

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            SY  LG +D + +LF +  +    P +  W  ++ GH   G ++  L     M + G  P
Sbjct: 18   SYASLGRLDYSVALFGRTQN----PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 73

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  + S +L+    L  ++ G+  H   ++ G D DLYV T L+D+Y +   + +AQ++F
Sbjct: 74   NAFTFSSILK----LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
            D M  +++V+  ++++ Y   G    A+ + + MEE                        
Sbjct: 130  DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEER----------------------- 166

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
                            + V W  +I G  QN    E+L  F +M +   KPN  T+ S+L
Sbjct: 167  ----------------DGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVL 210

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              CG LG L++G+ +H     NG   + +V T L+DMYSK G+L+ AR VF K  +K + 
Sbjct: 211  SACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVV 270

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +WN MI+G+A+ G  +EA+ LF  +   G  P  ITF  +L+AC +SG V EGW  F+ M
Sbjct: 271  AWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKM 330

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
              +Y I P IEHY CMV+LLG+AG++++A++ ++ M  +PD  +WG LLG+CR+HG +  
Sbjct: 331  KDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIAL 390

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             E     L      NS  Y L+ N+ A    W+ V RLR  M + GVK     S I+++ 
Sbjct: 391  GEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNN 450

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             VH F A G  HP   EIY  L  +   +K  GY P T  V  DI E EK + L  H+EK
Sbjct: 451  KVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEK 510

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LAI +GL+ T+    I+++KN RVC+DCH   K +S + GR+I +RD  RFHHF  G CS
Sbjct: 511  LAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCS 570

Query: 1071 CNDCW 1075
            C D W
Sbjct: 571  CGDYW 575



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 178/365 (48%), Gaps = 12/365 (3%)

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
             W  II         E A+  + +M     +  + T   +L+ C        GK +H  
Sbjct: 41  FFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQ 96

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            +K   +S+L V   L+ +Y+R   +  A ++FD+M + +L S  +M++ Y   G +D A
Sbjct: 97  AVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAA 156

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             LF+ M     + D + WN ++ G+  +G     L L R M     +PN  +V  VL A
Sbjct: 157 RVLFDGME----ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSA 212

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
             +L  L+ GR  H YI  NG+ ++++VGT+L+DMY K   L++A+ VFD + ++++VAW
Sbjct: 213 CGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAW 272

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
           NS+I GY   G    A ++   M    + P  +++  ++S     G   E   I + MK+
Sbjct: 273 NSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKD 332

Query: 662 S-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
             GI P +  +  +++   +  +  ++ +    M   +I+P+     +LL  C   G + 
Sbjct: 333 EYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM---NIEPDPVLWGTLLGACRLHGKIA 389

Query: 721 NGKEI 725
            G++I
Sbjct: 390 LGEKI 394



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 37/279 (13%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  + +  G  ++ L  + ++  +GV   +   + ILKLC        G  +H+  
Sbjct: 43  WTAIIHGH-ALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQA 97

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL---------------------- 358
           +K GFD D++++  L++ Y +  DV SA +LF  + +                       
Sbjct: 98  VKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 157

Query: 359 --------EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
                    D + WN +I    +N     A+ LFR M  + AK    T++ +L AC ++G
Sbjct: 158 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 217

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A   G+ +H Y+  + ++ N+ V   L+ MYS+   LE A  VFD + D ++ +WNSMI 
Sbjct: 218 ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 277

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS--GH 507
            Y   G+   A  LF  M    + P  IT+  +LS  GH
Sbjct: 278 GYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGH 316



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 45/280 (16%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G+  +A   F     R    W+  ++ Y   G   + L+     L  K       +
Sbjct: 147 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 206

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L++ L  C +L A   G  VH+ +   G  F+VH+  AL++ Y KC  +E A  +F ++ 
Sbjct: 207 LSV-LSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 265

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D +D + WN +I+        + A++LF+ M        + T + +L AC   G   EG 
Sbjct: 266 D-KDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 324

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH-----NLSSWNSMISS 471
            I                                   F+ MKD       +  +  M++ 
Sbjct: 325 DI-----------------------------------FNKMKDEYGIEPKIEHYGCMVNL 349

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
               G+V+ A+ L   MN   I+PD + W  LL     HG
Sbjct: 350 LGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGACRLHG 386


>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  411 bits (1057), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/582 (36%), Positives = 329/582 (56%), Gaps = 40/582 (6%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P    +N L+    +  +    L L   M   G +P+  +   V++A  E  +  +G   
Sbjct: 129  PPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLV 188

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H +++++G + D Y+ +SL+ +Y     L  A+++F+    R++V+WN++I GY      
Sbjct: 189  HTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEM 248

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
             +A+ + ++M    +  D++SWN++++GY+I G+                 PN       
Sbjct: 249  GHARMVFDRM----VCRDVISWNTMINGYAICGK-----------------PN------- 280

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
                       E+L  F QM+   +KP   T+ SLL  C  LG L  G  +H     N  
Sbjct: 281  -----------EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRI 329

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              ++ V T L+DMY+K G +  A +VF    +K + +WN +I G AI+GN KEA  LF E
Sbjct: 330  EVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKE 389

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            + E G +P+ ITF A+L+AC ++G+V+EG K  D MS+ Y I P +EHY C++DLL +AG
Sbjct: 390  MKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAG 449

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
            +L+EA + I TMP +P+ +  GALLG CRIHG+ E  E+  +RL  L+PC+S  Y L+ N
Sbjct: 450  FLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSN 509

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A + +W+D  ++R+ M   G+  V   S I++  +VH F A    HP + +IY +L  
Sbjct: 510  IYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNE 569

Query: 975  LVSEMKK-LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
            + + +K  +GY  DT  V  D++EE+K   L  H+EKLAI YGL+   S+  IR++KN R
Sbjct: 570  IHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLR 629

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            VC DCH   K +S V GREI +RD  RFHHF +GECSC D W
Sbjct: 630  VCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 179/352 (50%), Gaps = 8/352 (2%)

Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
           L+N +I     ++    A+ L+  M  S  K    T   +++AC +      G  +H +V
Sbjct: 133 LYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHV 192

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
           +KS  E +  + + LI +Y+    L  A ++F+     ++ SWN+MI  Y     +  A 
Sbjct: 193 VKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHAR 252

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +F++M    +  D+I+WN +++G+   G     L L   M+++G +P  ++V  +L A 
Sbjct: 253 MVFDRM----VCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSAC 308

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             L  L  G   H YI  N ++ +  VGT+L+DMY K   +  A +VF+ M++++++AWN
Sbjct: 309 AHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWN 368

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
           ++I+G    G    A+++  +M+E  ++P+ +++ +++S  S  G   E   ++  M +S
Sbjct: 369 TIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSS 428

Query: 663 -GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            GI P V  +  +I    +     E+++    M  E   PN + + +LL  C
Sbjct: 429 YGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPME---PNPSALGALLGGC 477



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 174/422 (41%), Gaps = 50/422 (11%)

Query: 165 NSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIW 224
           +S++ +P  L  PP++                 L+  N  + L  +K  HAQ+I      
Sbjct: 52  SSMSRTPNPLTNPPSNPQ--------------ILSLFNPCKTLRHLKQVHAQIITH---H 94

Query: 225 NS--DDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW 282
           NS       + +     F  F + AK  F +         + L    S      E L ++
Sbjct: 95  NSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLY 154

Query: 283 GELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
             +   G+         ++K C +    W G+ VH  ++K GF+ D ++  +L++ Y   
Sbjct: 155 HTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANG 214

Query: 343 RDVESANKLFSEVSDLE------------------------------DDLLWNEIIMVKL 372
           +D+ +A +LF+  S  +                              D + WN +I    
Sbjct: 215 KDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYA 274

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
              K   A+ LF +M+    K    T+V +L ACA +GA  +G  +H Y+  + +E N  
Sbjct: 275 ICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSI 334

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V   L+ MY++  K+ LAT+VF++M+  ++ +WN++I+     G V  A  LF +M  + 
Sbjct: 335 VGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAG 394

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYG 551
           ++P+ IT+  +LS     G       LL  M  S G  P       V+  +     L+  
Sbjct: 395 VEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEA 454

Query: 552 RE 553
            E
Sbjct: 455 ME 456



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 47/283 (16%)

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           A  I HH++N    P    + SLI     ++   E+L  +  M Q  +KP+  T   +++
Sbjct: 119 AKTIFHHLQN----PPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIK 174

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
            C    +   G  +H   +K+GF  D+Y+ + LI +Y+   +L +A+++F   + + + S
Sbjct: 175 ACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVS 234

Query: 772 WNC-------------------------------MIMGFAIYGNGKEAILLFHELLETGF 800
           WN                                MI G+AI G   EA+ LF ++   G 
Sbjct: 235 WNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGV 294

Query: 801 QPDAITFTALLAACKNSGLVEEGW---KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
           +P   T  +LL+AC + G +++G     Y +    + N I      + +VD+  K G + 
Sbjct: 295 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG----TALVDMYAKCGKIS 350

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            A      M  K D   W  ++    IHG+++ A+    +LFK
Sbjct: 351 LATQVFNAMESK-DVLAWNTIIAGMAIHGNVKEAQ----QLFK 388



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 19/192 (9%)

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           L  A+ +F    N   + +N +I   +      EA+ L+H +L++G +PD +T+  ++ A
Sbjct: 116 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 175

Query: 814 CKNS-----GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
           C  S     GL+            D  I+ ++ H       LG A  L         +  
Sbjct: 176 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQL-------FNLCS 228

Query: 869 KPDATIWGALLGSCRIHGHLEYAEIA-SRRLFKLEPCNSA-NYNLMMNLLAMSNRWEDVE 926
             D   W A+     I G++++ E+  +R +F    C    ++N M+N  A+  +  +  
Sbjct: 229 ARDVVSWNAM-----IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEAL 283

Query: 927 RLRHSMDEVGVK 938
            L   M  VGVK
Sbjct: 284 ALFDQMRAVGVK 295


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  411 bits (1057), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 257/837 (30%), Positives = 415/837 (49%), Gaps = 125/837 (14%)

Query: 316  VHASLIKRGF--DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            +H + ++R     F   +  AL+  Y +C D+ +A  LF+ +    D + +N +I     
Sbjct: 81   IHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPS-RDAVTFNSLIAALCL 139

Query: 374  NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESNLS 432
              +W  A+   R+M        S T+V +L AC+ +      G++ H + LK        
Sbjct: 140  FRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALK-------- 191

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
                       N  L+   R           ++N+++S Y  LG VD A  LF  ++++ 
Sbjct: 192  -----------NGFLDGDERF----------AFNALLSMYARLGLVDDAQMLFGSVDTTD 230

Query: 493  IQPD--IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
              P   ++TWN ++S     G     + ++  M + G RP+G + +  L A ++L +L  
Sbjct: 231  -SPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSL 289

Query: 551  GRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCL-------------------------- 583
            GRE H Y+L++  L  + +V ++L+DMY  ++ +                          
Sbjct: 290  GREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCG 349

Query: 584  -------QNAQEVFDNMKNRNIV--------------------AWNSLISGYCFK-GL-- 613
                   + A E+F  M+    V                    A    + GY  K G+  
Sbjct: 350  YAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMAD 409

Query: 614  --FVNAKKM-----LNQMEEEE-----IKP-DLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
              FV    M     L  ME        I+P D+VSWN+L++G  + G   +A  ++  M+
Sbjct: 410  NPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQ 469

Query: 661  NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
              G + +  T    I+G+                 +E + PN+ T+ +LL  C  L    
Sbjct: 470  QQGRFTDATTEDG-IAGT----------------DEEPVVPNNVTLMTLLPGCAMLAAPA 512

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             GKEIH   +++    D  V + L+DMY+K G L  +R VF +   + + +WN +IM + 
Sbjct: 513  KGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYG 572

Query: 781  IYGNGKEAILLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            ++G G EAI LF  ++ +   +P+ +TF A LAAC +SG+V+ G + F SM  ++ + PT
Sbjct: 573  MHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPT 632

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTM-PFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
             + ++C VD+LG+AG LDEA+  I +M P +   + W + LG+CR+H ++   EIA+ RL
Sbjct: 633  PDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERL 692

Query: 899  FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
            F+LEP  +++Y L+ N+ + +  WE    +R+ M + GV      SWI++D ++H F A 
Sbjct: 693  FQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAG 752

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
             + HP +  ++  +  L   M+  GY PDT  V  DI+E EK  +L  H+EKLAI +GL+
Sbjct: 753  ESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLL 812

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +T   A IRV KN RVC+DCH AAK++S + GREI LRD  RFHHF +G CSC D W
Sbjct: 813  RTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 191/403 (47%), Gaps = 28/403 (6%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH-- 330
           G   E +EV  ++  +GV          L  C++L    LG E+HA ++K   D D+   
Sbjct: 250 GRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLK---DSDLAAN 306

Query: 331 --LKCALMNFYGKCRDVESANKLFSEVSDLEDDL-LWNEIIMVKLRNEKWENAIKLFREM 387
             +  AL++ Y     V  A ++F  V      L LWN ++    +    E A++LF  M
Sbjct: 307 SFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARM 366

Query: 388 QFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           +  +    S  TI  +L ACA+   F   + +HGYVLK  +  N  V N L+ +Y+R   
Sbjct: 367 EAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGD 426

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +E A  +F +++  ++ SWN++I+     G++  A+ L  +M                 G
Sbjct: 427 MEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQ--------------QG 472

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            FT  + ++ +    G       PN  ++  +L     L     G+E HGY +R+ LD D
Sbjct: 473 RFTDATTEDGIA---GTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSD 529

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM-E 625
           + VG++L+DMY K  CL  ++ VFD +  RN++ WN LI  Y   GL   A  + ++M  
Sbjct: 530 IAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVM 589

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPN 667
             E KP+ V++ + ++  S  G     + + H MK N G+ P 
Sbjct: 590 SNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPT 632



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 176/382 (46%), Gaps = 28/382 (7%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS-- 255
           L   ++   LS  +  HA ++K   +  +  +  +L+  Y        A + F +     
Sbjct: 278 LPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGH 337

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGK-GVIFRSRILTIILKLCTKLMAFWLGV 314
           R    W++ +  Y   G + +E LE++  +  + GV+     +  +L  C +   F    
Sbjct: 338 RQLGLWNAMVCGYAQAGMD-EEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKE 396

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            VH  ++KRG   +  ++ ALM+ Y +  D+E+A  +F+ + +  D + WN +I   +  
Sbjct: 397 AVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAI-EPRDVVSWNTLITGCVVQ 455

Query: 375 EKWENAIKLFREMQ----FSSAKAISR--------------TIVKMLQACAKVGAFHEGK 416
               +A +L REMQ    F+ A                   T++ +L  CA + A  +GK
Sbjct: 456 GHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGK 515

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IHGY ++ AL+S+++V + L+ MY++   L L+  VFD +   N+ +WN +I +Y   G
Sbjct: 516 EIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHG 575

Query: 477 YVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
             D A +LF++M  S+  +P+ +T+   L+     G     + L   M+    R +G   
Sbjct: 576 LGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMK----RNHGVQP 631

Query: 536 SVVLQAVTELRLLKYGRESHGY 557
           +  L A     L + GR    Y
Sbjct: 632 TPDLHACAVDILGRAGRLDEAY 653


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  411 bits (1057), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 273/875 (31%), Positives = 423/875 (48%), Gaps = 115/875 (13%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY----------ESFGGEVQELLEV 281
            ++I  Y++ GD T A + F    SR  + W+S L  Y            F    +  L  
Sbjct: 132  AMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVS 191

Query: 282  WG---------ELHGKG-----VIFRSRILTIILKLCTKLMAF-WLG-VEVHASL----I 321
            W          E HGK       + R  +L       + L A   LG ++V  SL    +
Sbjct: 192  WTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL 251

Query: 322  KRGFDFDVHLKCALMNFYGKCRDV-ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            K GF+ DV +  A++N Y +   V ++A K F  + +  ++  W+ +I       + + A
Sbjct: 252  KTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIE-RNEYTWSTMIAALSHGGRIDAA 310

Query: 381  IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
            I                             A +E   +     ++AL + L+ C      
Sbjct: 311  I-----------------------------AVYERDPVKSIACRTALITGLAQCG----- 336

Query: 441  YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
                 +++ A  +F+ + +  + SWN++I+ Y   G V+ A  LF+KM       + I+W
Sbjct: 337  -----RIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR----NTISW 387

Query: 501  NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
              +++G+  +G  +  L LL+ +   G  P+ SS++ +  A + +  L+ G + H   ++
Sbjct: 388  AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447

Query: 561  NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
             G  ++ +   +L+ MY K   ++ A++VF  M                           
Sbjct: 448  VGCQFNSFACNALITMYGKCRNMEYARQVFSRM--------------------------- 480

Query: 621  LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                    +  D+VSWNS ++         EA     +M    +  + V+WT++IS    
Sbjct: 481  --------VTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAH 528

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
             E   E++  F  M  E   PNS  ++ LL  CG LG  + G++IH + +K G   +  V
Sbjct: 529  AEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIV 588

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            A  LI MY K G   S R +F     + + +WN +I G+A +G G+EAI ++  +   G 
Sbjct: 589  ANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGV 647

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
             P+ +TF  LL AC ++GLV+EGWK+F SMS DY + P  EHY+CMVDLLG+ G +  A 
Sbjct: 648  LPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAE 707

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
             FI  MP +PD  IW ALLG+C+IH + E  + A+ +LF++EP N+ NY ++ N+ +   
Sbjct: 708  QFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLG 767

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
             W +V  +R  M + GV      SW QI   +H F      H    EI   L  L + +K
Sbjct: 768  MWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLK 827

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
              GYVPDT  V  DIDEE+K   LL H+EKLA+ Y L+ T    PI+++KN R+C DCHT
Sbjct: 828  ATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHT 887

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              K++S V  R+I +RDG RFHHFR G CSC D W
Sbjct: 888  FIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 246/548 (44%), Gaps = 60/548 (10%)

Query: 340 GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
           G+   V  A ++F  +    D + WN +I     N   + A  L+  +   +     RT 
Sbjct: 45  GRLGRVGEAREVFDAMPR-RDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM----RTG 99

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
             +L    ++G   E ++    V    LE N    N +IS Y +N  + +A R+FD+M  
Sbjct: 100 AILLSGYGRLGRVLEARR----VFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPS 155

Query: 460 HNLSSWNSMISSYT-GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
            ++SSWNSM++ Y   L  VD A +LF KM     + ++++W  ++SG+    ++     
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVD-ARNLFEKMP----ERNLVSWTVMISGYGRIENHGKAWD 210

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           +   M   G  P+ S+ +  L AV  L  L          L+ G + D+ +GT+++++Y 
Sbjct: 211 IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270

Query: 579 KN-DCLQNAQEVFDNMKNRNIVAWNS-------------------------------LIS 606
           ++   L  A + F++M  RN   W++                               LI+
Sbjct: 271 RDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALIT 330

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
           G    G   +A+ +  Q+ E    P +VSWN+L++GY   G   EA  +   M     + 
Sbjct: 331 GLAQCGRIDDARILFEQIPE----PIVVSWNALITGYMQNGMVNEAKELFDKMP----FR 382

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           N ++W  +I+G  QN    E+L    ++ +  + P+ ++++S+   C  +  L+ G ++H
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
            L +K G   +++    LI MY K  N++ AR+VF +   K + SWN  +          
Sbjct: 443 SLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLD 502

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
           EA   F  +L      D +++T +++A  ++    E    F +M  ++  +P     + +
Sbjct: 503 EARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE-LPNSPILTIL 557

Query: 847 VDLLGKAG 854
           + + G  G
Sbjct: 558 LGVCGSLG 565



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/465 (22%), Positives = 195/465 (41%), Gaps = 93/465 (20%)

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           E  +S C+  I    R  ++  A  VFD+M   ++ +WNSMIS+Y   G  D A  L++ 
Sbjct: 31  ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           ++   ++   I                    LL G   LG                  R+
Sbjct: 91  ISGGNMRTGAI--------------------LLSGYGRLG------------------RV 112

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L+  R   G + RN + ++     +++  YV+N  +  A+ +FD M +R++ +WNS+++G
Sbjct: 113 LEARRVFDGMLERNTVAWN-----AMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTG 167

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
           YC     V+A+ +  +M E     +LVSW  ++SGY                        
Sbjct: 168 YCHSLQMVDARNLFEKMPER----NLVSWTVMISGYG----------------------- 200

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
                       + EN+ ++   F +M +E + P+ +  +S L    GLG L   + +  
Sbjct: 201 ------------RIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV 248

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGN-LKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
           L LK GF +D  + T ++++YS+  + L +A + F     +   +W+ MI   +  G   
Sbjct: 249 LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRID 308

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            AI ++    E          TAL+      G +++    F+ +       P +  ++ +
Sbjct: 309 AAIAVY----ERDPVKSIACRTALITGLAQCGRIDDARILFEQIPE-----PIVVSWNAL 359

Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           +    + G ++EA +    MPF+ +   W  ++     +G  E A
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAGYAQNGRSEEA 403


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/645 (31%), Positives = 361/645 (55%), Gaps = 46/645 (7%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            +I + +  G +  A  +F+ +     +P I  WN ++ G+  +  +Q+ L +   MQ   
Sbjct: 59   LIHASSSFGDITFARQVFDDLP----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P+  +   +L+A + L  L+ GR  H  + R G D D++V   L+ +Y K   L +A+
Sbjct: 115  VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174

Query: 588  EVFDNMK--NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--- 642
             VF+ +    R IV+W +++S Y   G  + A ++ + M + ++KPD V+  S+++    
Sbjct: 175  TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTC 234

Query: 643  --------------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                                            Y+  GQ   A ++   MK+    PN++ 
Sbjct: 235  LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLIL 290

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W ++ISG  +N   RE++  F +M  +D++P++ +++S +  C  +G L+  + ++    
Sbjct: 291  WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            ++ +  D ++++ LIDM++K G+++ AR VF ++ ++ +  W+ MI+G+ ++G  +EAI 
Sbjct: 351  RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            L+  +   G  P+ +TF  LL AC +SG+V EGW +F+ M+ D+ I P  +HY+C++DLL
Sbjct: 411  LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLL 469

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG+LD+A++ I+ MP +P  T+WGALL +C+ H H+E  E A+++LF ++P N+ +Y 
Sbjct: 470  GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
             + NL A +  W+ V  +R  M E G+   +  SW+++   +  F      HP   EI  
Sbjct: 530  QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 589

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            ++  + S +K+ G+V +      D+++EE  + L SH+E++AI YGL+ T    P+R+ K
Sbjct: 590  QVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITK 649

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R C +CH A K +S +  REI +RD  RFHHF++G CSC D W
Sbjct: 650  NLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 227/528 (42%), Gaps = 74/528 (14%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
           + +K  HA+++ +G +  S  ++  LI     FGD T A + F          W++ +  
Sbjct: 35  AQLKQIHARLLVLG-LQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           Y S     Q+ L ++  +    V   S     +LK C+ L    +G  VHA + + GFD 
Sbjct: 94  Y-SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFRE 386
           DV ++  L+  Y KCR + SA  +F  +   E  ++ W  I+    +N +   A+++F  
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSH 212

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+    K     +V +L A   +    +G+ IH  V+K  LE    +   L +MY++  +
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +  A  +FD MK  NL  WN+MIS Y   GY   A  +F++M +  ++PD I        
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI-------- 324

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                                      S++  + A  ++  L+  R  + Y+ R+    D
Sbjct: 325 ---------------------------SITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           +++ ++L+DM+ K   ++ A+ VFD   +R++V W+++I GY   G              
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG-------------- 403

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                                +++EA+ +   M+  G++PN VT+  L+     +   RE
Sbjct: 404 ---------------------RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNG 733
              FF  M    I P     + ++   G  G L    E I C+ ++ G
Sbjct: 443 GWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 256/870 (29%), Positives = 419/870 (48%), Gaps = 116/870 (13%)

Query: 237  YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG-VIFRSR 295
            Y + G  + A + F     R  A W++ +  Y        + LE +  +H  G  +  + 
Sbjct: 81   YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQ-ARRFLDGLETFVSMHRSGDSLPNAF 139

Query: 296  ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
                ++K C  L    L  ++     K  F  D  ++ AL++ + +C  V+ A++LFS++
Sbjct: 140  TFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 199

Query: 356  S----------------------------DL--EDDLLWNEIIMVKLRNEKWENAIKLFR 385
                                         D+   D + WN +I    ++ +   A+ L  
Sbjct: 200  ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 259

Query: 386  EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            EM     +  S T    L ACA++ +   GKQ+H  V++S  + +  V + LI +Y++  
Sbjct: 260  EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 319

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
              + A RVF+S++D N  SW  +I           +  LFN+M +  +  D      L+S
Sbjct: 320  SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            G F                                       L  GR+ H   L++G + 
Sbjct: 380  GCFNRMD-----------------------------------LCLGRQLHSLCLKSGHNR 404

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
             + V  SL+ +Y K   LQNA+ VF +M  R+IV+W S+I+ Y   G  + A++  + M 
Sbjct: 405  AIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMA 464

Query: 626  EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                  + ++WN+++  Y   G  ++ L +   M                          
Sbjct: 465  TR----NAITWNAMLGAYIQHGAEEDGLKMYSAM-------------------------- 494

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
                    + Q+D+ P+  T  +L + C  +G  + G +I    +K G I +  VA   I
Sbjct: 495  --------LSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAI 546

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
             MYSK G +  A+++F     K + SWN MI G++ +G GK+A   F ++L  G +PD I
Sbjct: 547  TMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYI 606

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            ++ A+L+ C +SGLV+EG  YFD M+  + I P +EH+SCMVDLLG+AG+L EA D I  
Sbjct: 607  SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDK 666

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP KP A +WGALL +C+IHG+ E AE+A++ +F+L+  +S +Y L+  + + + + +D 
Sbjct: 667  MPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDS 726

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
             ++R  M + G+K    +SW++++  VHVF A+   HP    I  ++  L+ ++  LGYV
Sbjct: 727  AQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV 786

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
                         E  +  + H+EKLA+ +G+M   +  PI ++KN R+C DCHT  K +
Sbjct: 787  -----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLI 835

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S V  RE  +RDG RFHHF+ G CSC D W
Sbjct: 836  SSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 124/542 (22%), Positives = 237/542 (43%), Gaps = 52/542 (9%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A+++ +   L++C   GA    + +HG ++   L S + + N L+  Y     L  A R+
Sbjct: 2   AVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRL 61

Query: 454 FDS-MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
             + +K+ N+ + N M++ Y   G +  A  LF++M     + D+ +WN L+SG+F    
Sbjct: 62  LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSGYFQARR 117

Query: 513 YQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
           + + L     M   G   PN  +   V+++   L   +   +  G   +     D  V T
Sbjct: 118 FLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVET 177

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DM+V+                             C  G    A ++ +Q+E    +P
Sbjct: 178 ALVDMFVR-----------------------------C--GYVDFASRLFSQIE----RP 202

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
            +   NS+++GY+       A+     M       +VV+W  +I+   Q+   RE+L   
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAER----DVVSWNMMIAALSQSGRVREALGLV 258

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
           ++M ++ ++ +STT +S L  C  L  L  GK++H   +++    D YVA+ LI++Y+K 
Sbjct: 259 VEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC 318

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G+ K A+ VF    ++   SW  +I G   Y    +++ LF+++       D      L+
Sbjct: 319 GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI 378

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
           + C N   +  G +   S+         I   + ++ L  K G L  A +F+ +   + D
Sbjct: 379 SGCFNRMDLCLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERD 436

Query: 872 ATIWGALLGSCRIHGHLEYAEIASRRLFK-LEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
              W +++ +    G++    I +R  F  +   N+  +N M+         ED  ++  
Sbjct: 437 IVSWTSMITAYSQIGNI----IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYS 492

Query: 931 SM 932
           +M
Sbjct: 493 AM 494



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 209/499 (41%), Gaps = 89/499 (17%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE--- 266
           K  HA++I+   +   D  V S LI  Y + G F  A + F     R+   W+  +    
Sbjct: 290 KQLHAKVIR--SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSL 347

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            YE F   V    E++ ++  + +      L  ++  C   M   LG ++H+  +K G +
Sbjct: 348 QYECFSKSV----ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 403

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLE--------------------------- 359
             + +  +L++ Y KC D+++A  +FS +S+ +                           
Sbjct: 404 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM 463

Query: 360 ---DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR---TIVKMLQACAKVGAFH 413
              + + WN ++   +++   E+ +K++  M   S K ++    T V + + CA +GA  
Sbjct: 464 ATRNAITWNAMLGAYIQHGAEEDGLKMYSAML--SQKDVTPDWVTYVTLFRGCADIGANK 521

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G QI G+ +K+ L  N+SV N  I+MYS+  ++  A ++FD +   ++ SWN+MI+ Y+
Sbjct: 522 LGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYS 581

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNG 532
             G    A   F+ M S   +PD I++  +LSG    G  Q        M  + G  P  
Sbjct: 582 QHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGL 641

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
              S ++  +        GR  H                           L  A+++ D 
Sbjct: 642 EHFSCMVDLL--------GRAGH---------------------------LTEAKDLIDK 666

Query: 593 MKNRNIV-AWNSLISGYCFKG---LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           M  +     W +L+S     G   L   A K + +++     PD  S+  L   YS  G+
Sbjct: 667 MPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDS----PDSGSYMLLAKIYSDAGK 722

Query: 649 SKEALVIIHHMKNSGIYPN 667
           S ++  +   M++ GI  N
Sbjct: 723 SDDSAQVRKLMRDKGIKKN 741


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
          Length = 617

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/580 (36%), Positives = 324/580 (55%), Gaps = 39/580 (6%)

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            ++  WN  L       S  + ++L   ++     P+  + S VL+A + L  ++ G+  H
Sbjct: 77   EVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVH 136

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
            GY+ + GL  ++++   ++ +Y     +  A++VFD M  R                   
Sbjct: 137  GYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQR------------------- 177

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                            D+++WN +++     G ++ A  +   M       NV +WTS+I
Sbjct: 178  ----------------DVITWNIMIARLVKMGDAEGAYKLFAEMPER----NVRSWTSMI 217

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
             G  Q    +E++  F++M+   + PN  T+ ++L  C  +G L  G+ IH    ++G+ 
Sbjct: 218  GGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYE 277

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
            K+  V   LIDMY K G L+ A  +F     +T+ SW+ MI G A +G  ++A+ LF+++
Sbjct: 278  KNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKM 337

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
            + TG +P+A+TF  +L AC + G+VE+G KYF SM+ DY I+P IEHY CMVDL  +AG 
Sbjct: 338  INTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGL 397

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L EA +FI  MP  P+  +WGALLG C++H +++ AE A+R L KL+P N   Y ++ N+
Sbjct: 398  LQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNI 457

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A + RWEDV R+R  M + GVK    WS I ++ +V+ F A    HP T EI+     L
Sbjct: 458  YAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKL 517

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
            +  MK  GYVP+T  V  D++E++K K L  H+EKLA+V+GL+KT     IR++KN RVC
Sbjct: 518  LQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVC 577

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH A K +S+V  REI +RD  RFH F+ G CSC D W
Sbjct: 578  EDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 214/440 (48%), Gaps = 12/440 (2%)

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
           S  KL  ++ D  +   WN  +      +   +AI LF  ++         T   +L+AC
Sbjct: 64  SYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKAC 123

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           +++     GK +HGYV K  L+SN+ + N ++ +Y+   ++ +A +VFD M   ++ +WN
Sbjct: 124 SRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
            MI+    +G  + A+ LF +M    ++    +W  ++ G+   G  +  + L   M+  
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVR----SWTSMIGGYAQCGKSKEAIDLFLEMEDA 239

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
           G  PN  +V  VL A  ++  L  GR  H +  R+G + ++ V  +L+DMYVK  CL++A
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDA 299

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
             +FDNM+ R +V+W+++I+G    G   +A  + N+M    +KP+ V++  ++   S  
Sbjct: 300 CRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHM 359

Query: 647 GQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
           G  ++       M ++ GI P +  +  ++    +    +E+ +F + M    I PN   
Sbjct: 360 GMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMP---IAPNGVV 416

Query: 706 MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFR 762
             +LL  C     ++  +E      K   + D Y    L ++Y+++G   ++   R++ R
Sbjct: 417 WGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVV-LSNIYAEAGRWEDVARVRKLMR 475

Query: 763 KSANKTLASWNCMIMGFAIY 782
               K    W+ +++   +Y
Sbjct: 476 DRGVKKTPGWSSIMVEGVVY 495



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 189/432 (43%), Gaps = 73/432 (16%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF-LYFSRSYADWSSFLEDY 268
           +K  HA ++K     +S  +  S +     F    S AK  F L  +     W++ L  +
Sbjct: 31  LKQLHAHLLKTNSPLSS--LPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSF 88

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
              G    + + ++  L    +       + +LK C++L+    G  VH  + K G   +
Sbjct: 89  AE-GDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII--MVKL-------------- 372
           + L+  +++ Y  C ++  A K+F ++    D + WN +I  +VK+              
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQ-RDVITWNIMIARLVKMGDAEGAYKLFAEMP 206

Query: 373 -RN--------------EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
            RN               K + AI LF EM+ +       T+V +L ACA +G    G++
Sbjct: 207 ERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRR 266

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IH +  +S  E N+ VCN LI MY +   LE A R+FD+M++  + SW++MI+     G 
Sbjct: 267 IHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGR 326

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            + A +LFNKM ++ ++P+ +T+                         +G          
Sbjct: 327 AEDALALFNKMINTGVKPNAVTF-------------------------IG---------- 351

Query: 538 VLQAVTELRLLKYGRESHGYILRN-GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-N 595
           +L A + + +++ GR+    + R+ G+   +     ++D++ +   LQ A E   NM   
Sbjct: 352 ILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIA 411

Query: 596 RNIVAWNSLISG 607
            N V W +L+ G
Sbjct: 412 PNGVVWGALLGG 423


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 265/941 (28%), Positives = 444/941 (47%), Gaps = 123/941 (13%)

Query: 238  LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
            + FG+   A + F     R    W+  +  Y   G  ++E L+++  +   G+       
Sbjct: 142  VRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVG-FLEEALDLYYRMLWAGMRPDVYTF 200

Query: 298  TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
              +L+ C  +  + +G EVHA +++ GF  +V +  AL+  Y KC D+ +A K+F  ++ 
Sbjct: 201  PCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA- 259

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
            + D + WN +I     N + E  ++LF  M  +  +    TI  +  A   +      K+
Sbjct: 260  MTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKE 319

Query: 418  IHGYVLKSALESNLSVCNCLISM-------------------------------YSRNNK 446
            +HG+ +K     +++ CN LI M                               Y +N  
Sbjct: 320  MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379

Query: 447  LELATRVFDSMKDHNLSS---------------------------------------WNS 467
             + A  V+  M+ HN++                                         N+
Sbjct: 380  PDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA 439

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH-FTHGSYQNVLTLLRGMQSL 526
            ++  Y    ++D A  +F  M     + D+++W+ +++G  F H S+ + L   R M  L
Sbjct: 440  LLEMYAKSKHIDKAIEVFKFMA----EKDVVSWSSMIAGFCFNHRSF-DALYYFRYM--L 492

Query: 527  G-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            G  +PN  +    L A      L+ G+E H Y+LR G+  + YV  +L+D+YVK      
Sbjct: 493  GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--------------------- 624
            A   F     +++V+WN ++SG+   GL   A  + NQM                     
Sbjct: 553  AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLG 612

Query: 625  ------EEEEIKPD------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                  +  E+  +      +V  N+L+  Y+      +A+ +   M       +VV+W+
Sbjct: 613  RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK----DVVSWS 668

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            S+I+G   N    ++L +F  M    +KPNS T  + L  C   G L++GKEIH   L+ 
Sbjct: 669  SMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 727

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G   + YV   L+D+Y K G    A   F   + K + SWN M+ GF  +G G  A+ LF
Sbjct: 728  GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 787

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            ++++E G  PD +TF  L+ AC  +G+V +GW+ F   +  ++I+P ++HY+CMVDLL +
Sbjct: 788  NQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSR 846

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
             G L EA++ I  MP KPDA +WGALL  CRIH H+E  E+A++ + +LEP + A + L+
Sbjct: 847  VGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLL 906

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             +L   + +W  V R+R +M E G++     SW+++  + H F  +   HP   EI   L
Sbjct: 907  CDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVL 966

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
            + +   MK  G+ P      +++ E++   +L  H+E+LA+ +GL+ T     I V KN 
Sbjct: 967  HGIYERMKACGFAPVESLEDKEVSEDD---ILCGHSERLAVAFGLINTTPGTTISVTKNR 1023

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
              C  CH   K +S +  REI +RD  + H F++G+CSC D
Sbjct: 1024 YTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 156/667 (23%), Positives = 291/667 (43%), Gaps = 89/667 (13%)

Query: 257 SYADWSSFLEDYESFGGEVQEL--LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
           +Y+D S+ L    S G   Q L  LE   E   +G          + +LC    A   G+
Sbjct: 63  TYSDRSAALRALCSHGQLAQALWLLESSPEPPDEGA------YVALFRLCEWRRAVDAGM 116

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
              A        F + L  A+++   +  ++  A ++F+++ +  D   WN ++    + 
Sbjct: 117 RACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPE-RDVFSWNVMVGGYGKV 175

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              E A+ L+  M ++  +    T   +L+ C  +  +  G+++H +VL+      + V 
Sbjct: 176 GFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVL 235

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L++MY++   +  A +VFD M   +  SWN+MI+ +      +    LF  M  + +Q
Sbjct: 236 NALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ 295

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           P+++T                                 +SV+V    ++E   + + +E 
Sbjct: 296 PNLMTI--------------------------------TSVTVASGMLSE---VGFAKEM 320

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           HG+ ++ G   D+    SL+ MY     + +A ++F  M+ ++ ++W ++ISGY   G  
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380

Query: 615 VNAKKMLNQMEEEEIKPD-----------------------------------LVSWNSL 639
             A ++   ME   + PD                                   +V  N+L
Sbjct: 381 DKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANAL 440

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           +  Y+      +A+ +   M       +VV+W+S+I+G   N    ++L +F  M    +
Sbjct: 441 LEMYAKSKHIDKAIEVFKFMAEK----DVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-V 495

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           KPNS T  + L  C   G L++GKEIH   L+ G   + YV   L+D+Y K G    A  
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            F   + K + SWN M+ GF  +G G  A+ LF++++ T      +   + LAAC   G 
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGR 613

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           ++ G K  + ++ +   I  +   + ++++  K+ ++D+A +  + M  K D   W +++
Sbjct: 614 LDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMI 671

Query: 880 -GSCRIH 885
            G C  H
Sbjct: 672 AGFCFNH 678


>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/720 (33%), Positives = 389/720 (54%), Gaps = 56/720 (7%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+ C+K     L  ++H+ +I  G      L   +++ Y     V  A ++F EVS +E
Sbjct: 40   LLQQCSK---SHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVSPIE 95

Query: 360  ---DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
               + LLWN I+   + +   E A++++  M+     A   T   +++ACA +G+    +
Sbjct: 96   CFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCR 155

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
             +HG+V++   + NL V N L+ MY +  +++ A +VF+ M   +  SWN+M+S Y  L 
Sbjct: 156  SVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYA-LN 214

Query: 477  Y-VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            Y    A  +F  M S+ ++P+++TW  LLS H   G +   + L   M+  G      ++
Sbjct: 215  YDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEAL 274

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            +VVL    +L     G+  HGY+++ G +  L+V  SL+ +Y K+  +  A+ +F  +K 
Sbjct: 275  AVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKT 334

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            +NIV                                   SWN+L+S Y+  G   EA  I
Sbjct: 335  KNIV-----------------------------------SWNALISSYADLGWCDEAFAI 359

Query: 656  IHHMKNSGIYP----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
               ++ +  YP    NVV+W+++I G        E+L+ F +MQ   +K NS T++S+L 
Sbjct: 360  FLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLS 419

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             C  L  L  G+EIH   +++    +  V  GLI+MY+KSG+ K    VF K  NK L S
Sbjct: 420  VCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLIS 479

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            WN M+ G+ I+G G+ AI  F ++++ GF+PD +TF A+L+AC ++GLV EG + FD M 
Sbjct: 480  WNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMI 539

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             ++ + P +EHY+CMVDLLG+AG L EA   +++MP +P+A +WGALL SCR+H + E A
Sbjct: 540  KEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVA 599

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E  + ++F L    + +Y L+ N+ A S RWED  ++R S    G+K     SWIQ+ + 
Sbjct: 600  EETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKK 659

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKL 1011
            V++FSA    H    E+Y  L  L  +M+  GY+P       DIDEE++  +LL ++  L
Sbjct: 660  VYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIP-------DIDEEQR-SILLGYSMPL 711



 Score =  209 bits (531), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 264/542 (48%), Gaps = 47/542 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYES 270
           H+Q+I  G    S  +   ++  Y  FG  + A + F +     +++   W+S L    +
Sbjct: 54  HSQIIVTGS-HRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVA 112

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
            G   +E LE++  +   GV        ++++ C  + +  L   VH  +++ GF +++H
Sbjct: 113 HG-YCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLH 171

Query: 331 LKCALMNFYGKCRDVESANKLFSEVS---------------------------------D 357
           +   LM  YGK   ++ A K+F  ++                                  
Sbjct: 172 VGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAG 231

Query: 358 LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           LE +L+ W  ++    R  +    ++LF  M+     A +  +  +L     + AF EGK
Sbjct: 232 LEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGK 291

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            IHGYV+K   E+ L V N LI +Y ++  +  A  +F  +K  N+ SWN++ISSY  LG
Sbjct: 292 VIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLG 351

Query: 477 YVDVAWSLFNKMNSSR----IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
           + D A+++F ++  +     ++P++++W+ ++ G  + G  +  L L R MQ    + N 
Sbjct: 352 WCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANS 411

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            +++ VL    EL  L  GRE HG+++R+ +D ++ VG  L++MY K+   +    VF+ 
Sbjct: 412 VTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEK 471

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           ++N+++++WN++++GY   GL  NA +  +QM ++  +PD V++ +++S  S  G   E 
Sbjct: 472 IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEG 531

Query: 653 LVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
             +   M K   + P +  +  ++    +    +E+ K    M    ++PN+    +LL 
Sbjct: 532 RELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP---VEPNACVWGALLN 588

Query: 712 TC 713
           +C
Sbjct: 589 SC 590


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 242/830 (29%), Positives = 421/830 (50%), Gaps = 89/830 (10%)

Query: 297  LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV- 355
            L  ++  C+ L     G  +H+ +  R F+ +  L  AL++ Y KC  +  A + F  + 
Sbjct: 10   LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 69

Query: 356  -SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI-SRTIVKMLQACAKVG--A 411
             +   D + WN +I   LRN     A++LFR+M    A    S T V +L +C + G  +
Sbjct: 70   RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLS 129

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              + + IHG ++ + +E    V                                 +++ S
Sbjct: 130  LEDVRAIHGRIVGAGIEREAFV-------------------------------RTALVDS 158

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            Y  LG +D AW +F + +       ++T + ++S  + +G  Q  L L   M   G +P+
Sbjct: 159  YGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPS 218

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-----DLYVGTSLMDMYVKNDCLQNA 586
            G ++  VL A +   +L  G  +  ++L   ++      D  +GT+L+  Y +++ L  A
Sbjct: 219  GVTLVSVLNACS---MLPVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRA 274

Query: 587  QEVFDNMKNRNIVAWNSLISGYC----------------FKGL------FVNA------- 617
            +  FD +++ ++V+WN++ + Y                  +G+      F+ A       
Sbjct: 275  RATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAY 334

Query: 618  ---------KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
                     K++ + +EE  ++ D    N+ ++ Y+  G   +A  +   +  S    + 
Sbjct: 335  PPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERI--SPTRRDC 392

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +TW S+++    +   +E+ + F  M+ E  +KPN  T  ++L        +  G+EIH 
Sbjct: 393  ITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHA 452

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN--KTLASWNCMIMGFAIYGNG 785
              + NGF  D  +   L++MY+K G+L  A+ +F KS++  + + +W  ++ G+A YG  
Sbjct: 453  RVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQA 512

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            + A+ LF  + + G +P+ ITF + L AC + G +E+G +    M+ D+ I+P  +H+SC
Sbjct: 513  ERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSC 572

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            +VDLLG+ G LDEA   +     + D   W ALL +C+    LE  E  + R+ +L+P  
Sbjct: 573  IVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEV 631

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            +++Y ++ ++ A + RW +   +R +M + G+++    S ++++Q +H FSA    HP +
Sbjct: 632  ASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKS 691

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
             EIY EL  L   +K  GYV DT  V  D+ +E K ++L+ H+EKLAI +GLM T S +P
Sbjct: 692  EEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSP 751

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +RVIKN RVCSDCHTA K +S V GR+I +RD +R+HHF  G CSC D W
Sbjct: 752  LRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 164/409 (40%), Gaps = 57/409 (13%)

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           RPN  ++  ++ A + L  L  GR  H  I     + +  +G +L+ MY K   L +A++
Sbjct: 4   RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63

Query: 589 VFDNM---KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------------- 632
            FD +     R++V WN++IS +   G    A ++   M+ +   P              
Sbjct: 64  AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCV 123

Query: 633 ---LVSW----------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
              L+S                        +LV  Y   G   +A  +     +     +
Sbjct: 124 EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTS 183

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG-------LLQ 720
           +VT +++IS   QN   +ESL+ F  M  E  KP+  T+ S+L  C  L        +L+
Sbjct: 184 LVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLE 243

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
              E+          +D  + T L+  Y++S +L  AR  F    +  + SWN M   + 
Sbjct: 244 QAMEV------VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYL 297

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKN--SGLVEEGWKYFDSMSTDYNIIP 838
            +   +EA++LF  +L  G +P   TF   L AC            K   S+  +  +  
Sbjct: 298 QHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEG 357

Query: 839 TIEHYSCMVDLLGKAGYLDEAWD-FIRTMPFKPDATIWGALLGSCRIHG 886
                +  +++  K G L +A   F R  P + D   W ++L +   HG
Sbjct: 358 DTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG 406



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
           +++PN   + +L+  C  LG L  G+ IH       F +++ +   LI MYSK G+L  A
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 758 REVFR---KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF-QPDAITFTALLAA 813
           ++ F    +++ + + +WN MI  F   G+ +EA+ LF ++   G   P+++TF ++L +
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 814 CKNSGLVE-EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD-FIRTMPFKPD 871
           C  +GL+  E  +          I       + +VD  GK G LD+AW+ F+R    +P 
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 872 ATI--WGALLGSC 882
            ++    A++ +C
Sbjct: 182 TSLVTCSAMISAC 194



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 12/301 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y    D + A   F    S     W++    Y       +E L ++  +  +GV 
Sbjct: 260 TLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHH-RPREALVLFERMLLEGV- 317

Query: 292 FRSRILTIILKLCT-----KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
            R  + T I  L          A  +G  + + L + G + D  +  A +N Y KC  + 
Sbjct: 318 -RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLA 376

Query: 347 SANKLFSEVSDLEDD-LLWNEIIMVKLRNEKWENAIKLFREMQFSS-AKAISRTIVKMLQ 404
            A  +F  +S    D + WN ++     +   + A +LF+ M+     K    T V +L 
Sbjct: 377 DARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLD 436

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD--SMKDHNL 462
           A     +  +G++IH  V+ +  ES+  + N L++MY++   L+ A  +FD  S    ++
Sbjct: 437 ASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDV 496

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            +W S+++ Y   G  + A  LF  M    ++P+ IT+   L+     G  +    LL G
Sbjct: 497 IAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSG 556

Query: 523 M 523
           M
Sbjct: 557 M 557



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 144/324 (44%), Gaps = 28/324 (8%)

Query: 247 AKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI-ILK 302
           A+A F   S +  D   W+S L  Y    G  +E  E++  +  + ++  +++  + +L 
Sbjct: 378 ARAVFERISPTRRDCITWNSMLAAY-GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLD 436

Query: 303 LCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
             T   +   G E+HA ++  GF+ D  ++ AL+N Y KC  ++ A  +F + S  ++D+
Sbjct: 437 ASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDV 496

Query: 363 L-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI--- 418
           + W  ++    +  + E A+KLF  MQ    +    T +  L AC   G   +G ++   
Sbjct: 497 IAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSG 556

Query: 419 ----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
               HG V  S   S      C++ +  R  +L+ A ++ +     ++ +W +++ +   
Sbjct: 557 MTPDHGIVPASKHFS------CIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDACKN 610

Query: 475 LGYVDVAWSLFNKMNSSRIQPDII-TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR--PN 531
              ++       ++   ++ P++  ++  L S +   G +    T+ + M   G R  P 
Sbjct: 611 SKELERGERCAERI--MQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPG 668

Query: 532 GSSVSVVLQAVTELRLLKYGRESH 555
            S+V V      EL     G +SH
Sbjct: 669 CSAVEV----NQELHSFSAGDKSH 688


>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/713 (33%), Positives = 385/713 (53%), Gaps = 55/713 (7%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+ C+K     L  ++H+ +I  G      L   +++ Y     V  A ++F EVS +E
Sbjct: 40   LLQQCSKSH---LSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVSPIE 95

Query: 360  ---DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
               + LLWN I+   + +   E A++++  M+     A   T   +++ACA +G+    +
Sbjct: 96   CFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCR 155

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
             +HG+V++   + NL V N L+ MY +  +++ A +VF+ M   +  SWN+M+S Y  L 
Sbjct: 156  SVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYA-LN 214

Query: 477  Y-VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            Y    A  +F  M S+ ++P+++TW  LLS H   G +   + L   M+  G      ++
Sbjct: 215  YDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEAL 274

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            +VVL    +L     G+  HGY+++ G +  L+V  SL+ +Y K+  +  A+ +F  +K 
Sbjct: 275  AVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKT 334

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            +NIV                                   SWN+L+S Y+  G   EA  I
Sbjct: 335  KNIV-----------------------------------SWNALISSYADLGWCDEAFAI 359

Query: 656  IHHMKNSGIYP----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
               ++ +  YP    NVV+W+++I G        E+L+ F +MQ   +K NS T++S+L 
Sbjct: 360  FLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLS 419

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             C  L  L  G+EIH   +++    +  V  GLI+MY+KSG+ K    VF K  NK L S
Sbjct: 420  VCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLIS 479

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            WN M+ G+ I+G G+ AI  F ++++ GF+PD +TF A+L+AC ++GLV EG + FD M 
Sbjct: 480  WNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMI 539

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             ++ + P +EHY+CMVDLLG+AG L EA   +++MP +P+A +WGALL SCR+H + E A
Sbjct: 540  KEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVA 599

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E  + ++F L    + +Y L+ N+ A S RWED  ++R S    G+K     SWIQ+ + 
Sbjct: 600  EETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKK 659

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            V++FSA    H    E+Y  L  L  +M+  GY+P       DIDEE++  +L
Sbjct: 660  VYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIP-------DIDEEQRSILL 705



 Score =  208 bits (529), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 264/542 (48%), Gaps = 47/542 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYES 270
           H+Q+I  G    S  +   ++  Y  FG  + A + F +     +++   W+S L    +
Sbjct: 54  HSQIIVTGS-HRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVA 112

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
            G   +E LE++  +   GV        ++++ C  + +  L   VH  +++ GF +++H
Sbjct: 113 HG-YCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLH 171

Query: 331 LKCALMNFYGKCRDVESANKLFSEVS---------------------------------D 357
           +   LM  YGK   ++ A K+F  ++                                  
Sbjct: 172 VGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAG 231

Query: 358 LEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           LE +L+ W  ++    R  +    ++LF  M+     A +  +  +L     + AF EGK
Sbjct: 232 LEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGK 291

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            IHGYV+K   E+ L V N LI +Y ++  +  A  +F  +K  N+ SWN++ISSY  LG
Sbjct: 292 VIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLG 351

Query: 477 YVDVAWSLFNKMNSSR----IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
           + D A+++F ++  +     ++P++++W+ ++ G  + G  +  L L R MQ    + N 
Sbjct: 352 WCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANS 411

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            +++ VL    EL  L  GRE HG+++R+ +D ++ VG  L++MY K+   +    VF+ 
Sbjct: 412 VTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEK 471

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           ++N+++++WN++++GY   GL  NA +  +QM ++  +PD V++ +++S  S  G   E 
Sbjct: 472 IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEG 531

Query: 653 LVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
             +   M K   + P +  +  ++    +    +E+ K    M    ++PN+    +LL 
Sbjct: 532 RELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSM---PVEPNACVWGALLN 588

Query: 712 TC 713
           +C
Sbjct: 589 SC 590


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
            At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/632 (35%), Positives = 350/632 (55%), Gaps = 36/632 (5%)

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
             G V+ A   F +++    +PDI+ WN ++ G+         + +   MQ     PN  +
Sbjct: 32   FGDVNYAHKAFREVS----EPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFT 87

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
               VL+A     +   G++ HG   + G   +++V  SL+ MY K   +  A+ VFD + 
Sbjct: 88   FLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH 147

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY----------S 644
            +R +V+W S+ISGY   G  + A  +  +M +  +KPD ++  S+++ Y          S
Sbjct: 148  DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKS 207

Query: 645  IWG--------------------QSKEALV-IIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            I G                     +K  LV +     N    PN++ W ++ISG   N  
Sbjct: 208  IHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGY 267

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              E++K F +M  ++I+ +S TM S +     +G L+  + +     K+ +  D +V TG
Sbjct: 268  GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTG 327

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            LIDMY+K G++  AR VF + A+K +  W+ MIMG+ ++G+G+EAI L++E+ + G  P+
Sbjct: 328  LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 387

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
              TF  LL ACKNSGLV+EGW+ F  M  D+ I P  +HYSC+VDLLG+AGYL++A+DFI
Sbjct: 388  DGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI 446

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
             +MP KP  ++WGALL +C+IH  +   EIA+ +LF L+P N+ +Y  + NL A ++ W 
Sbjct: 447  MSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWT 506

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
             V  +R  M + G+   L  S I+I+  +  F      HP + EI+ EL  L   +K  G
Sbjct: 507  RVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAG 566

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            YVP    V  D++ EE  + L  H+E+LA+ YG++ T     +R+ KN R C +CH+A K
Sbjct: 567  YVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIK 626

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +S +  REI +RD  RFHHF++G CSC D W
Sbjct: 627  LISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 210/481 (43%), Gaps = 77/481 (16%)

Query: 315 EVHASLIKRGFDFDVHLKCA--LMNFYGKC---RDVESANKLFSEVSDLEDDLLWNEIIM 369
           +V+  LI  G       KC   ++ F   C    DV  A+K F EVS+  D LLWN II 
Sbjct: 5   QVYVQLIVSGLH-----KCRFLMIKFINACLHFGDVNYAHKAFREVSE-PDILLWNAIIK 58

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
              +    +  I+++ +MQ S       T + +L+AC        GKQIHG   K    S
Sbjct: 59  GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGS 118

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           N+ V N L+SMY++  ++  A  VFD + D  + SW S+IS Y   G    A ++F +M 
Sbjct: 119 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 178

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
              ++PD   W  L+S                                V+ A T +  L 
Sbjct: 179 QCNVKPD---WIALVS--------------------------------VMTAYTNVEDLG 203

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G+  HG + + GL+++  +  SL  MY K   ++ A+  F+ M+  N++ WN++ISGY 
Sbjct: 204 QGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYA 263

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---------------SGYSIWGQSKEAL- 653
             G    A K+  +M  + I+ D ++  S V                GY    + ++   
Sbjct: 264 NNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTF 323

Query: 654 ----VIIHHMKNSGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
               +I  + K   IY            +VV W+ +I G   + + +E++  + +M+Q  
Sbjct: 324 VNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG 383

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           + PN  T   LL  C   GL++ G E+  L   +G        + ++D+  ++G L  A 
Sbjct: 384 VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 443

Query: 759 E 759
           +
Sbjct: 444 D 444



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 232/532 (43%), Gaps = 48/532 (9%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           L FGD   A KAF          W++ ++ Y      V   + ++ ++    V       
Sbjct: 30  LHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQ-KNIVDAPIRMYMDMQISQVHPNCFTF 88

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
             +LK C       +G ++H    K GF  +V ++ +L++ Y K   +  A  +F ++ D
Sbjct: 89  LYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD 148

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
               + W  II   ++N     A+ +F+EM+  + K     +V ++ A   V    +GK 
Sbjct: 149 -RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKS 207

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IHG V K  LE    +   L +MY++   +E+A   F+ M+  NL  WN+MIS Y   GY
Sbjct: 208 IHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGY 267

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            + A  LF +M +  I+ D IT                                    S 
Sbjct: 268 GEEAIKLFREMITKNIRVDSITMR----------------------------------SA 293

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           VL A  ++  L+  R   GYI ++    D +V T L+DMY K   +  A+ VFD + +++
Sbjct: 294 VL-ASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKD 352

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           +V W+ +I GY   G    A  + N+M++  + P+  ++  L++     G  KE   + H
Sbjct: 353 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 412

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            M + GI P+   ++ ++    +     ++  F + M    IKP  +   +LL  C    
Sbjct: 413 LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMP---IKPGVSVWGALLSACKIHR 469

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            ++ G+    +  +  FI D Y  TG    Y +  NL ++  ++ + AN  L
Sbjct: 470 KVRLGE----IAAEQLFILDPY-NTG---HYVQLSNLYASAHLWTRVANVRL 513



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 147/330 (44%), Gaps = 5/330 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H Q  K G  + S+  V+ SL+  Y +FG  + A   F     R+   W+S +  Y 
Sbjct: 105 KQIHGQTFKYG--FGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYV 162

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G+  E L V+ E+    V      L  ++   T +     G  +H  + K G +F+ 
Sbjct: 163 Q-NGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEP 221

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  +L   Y K   VE A   F+ +    + +LWN +I     N   E AIKLFREM  
Sbjct: 222 DIVISLTTMYAKRGLVEVARFFFNRMEK-PNLILWNAMISGYANNGYGEEAIKLFREMIT 280

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            + +  S T+   + A A+VG+    + + GY+ KS    +  V   LI MY++   + L
Sbjct: 281 KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYL 340

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A  VFD + D ++  W+ MI  Y   G+   A  L+N+M  + + P+  T+  LL+    
Sbjct: 341 ARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKN 400

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            G  +    L   M   G  P+    S V+
Sbjct: 401 SGLVKEGWELFHLMPDHGIEPHHQHYSCVV 430


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At2g01510-like [Cucumis
            sativus]
          Length = 816

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/744 (29%), Positives = 392/744 (52%), Gaps = 67/744 (9%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            W  +I   L++ + + A +L+ +M+    +    T+V +L    ++   +   QIH +V+
Sbjct: 108  WTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVI 167

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            K   E NL VCN L+  Y + + L LA++                               
Sbjct: 168  KLGYEYNLMVCNSLVDAYCKTHCLYLASQ------------------------------- 196

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            LF  M    +  D +T+N L++G+   G  +  + L   + + G +P+  + + +L A  
Sbjct: 197  LFKHM----LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAV 252

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
             L   K+G++ HG++L+    ++++VG +L+D Y K+D +    ++F  M   + +++N 
Sbjct: 253  GLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNV 312

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---------------------G 642
            +I+ Y + G F  +  +  +++          + +L+S                     G
Sbjct: 313  VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372

Query: 643  YSIWGQSKEALVIIHHMKNSG-----IYPNV-----VTWTSLISGSLQNENYRESLKFFI 692
             +   + + ALV ++   N       I+ N+     V WT++IS  +Q   + E +  F 
Sbjct: 373  ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432

Query: 693  QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
             M++  +  +  T +S+L+ C  L  +  G+++H L +++GF+ + Y  + L+D Y+K G
Sbjct: 433  DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492

Query: 753  NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
             +  A + F +   +   SWN +I  +A  GN    +  F +++++G++PD+++F ++L+
Sbjct: 493  CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552

Query: 813  ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            AC + G VEE   +F+SM+  Y + P  EHY+ MVD+L + G  DEA   +  MPF+P  
Sbjct: 553  ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSE 612

Query: 873  TIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHS 931
             +W ++L SCRIH + E A+ A+ RLF +E   ++A Y  M N+ A++ +W++V +++ +
Sbjct: 613  IMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKA 672

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M + GV+ V  +SW++I    HVFSA    HP   +I  ++  L  EM+K GY PDT C 
Sbjct: 673  MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCA 732

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+DE  K + L  H+E+ AI + LM T   +PI V+KN R C+DCH A K +S +  R
Sbjct: 733  LHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVER 792

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD +RFHHF++G CSC D W
Sbjct: 793  EIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 122/522 (23%), Positives = 224/522 (42%), Gaps = 70/522 (13%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  +L+FG  + A + F     R+   W+  +  Y     + +E   ++ ++   G+  
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQ-SNQSKEAFRLYADMRRGGIEP 138

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               L  +L    +L    + V++H  +IK G+++++ +  +L++ Y K   +  A++LF
Sbjct: 139 DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLF 198

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKW-ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
             +  L  D +    +M    NE   E AI+LF E+  S  K    T   +L A   +  
Sbjct: 199 KHM--LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+Q+HG+VLK+    N+ V N L+  YS++++++   ++F  M + +  S+N +I+S
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITS 316

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y                           WN         G ++    L R +Q   F   
Sbjct: 317 Y--------------------------AWN---------GQFKESFDLFRKLQFTRFDRR 341

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
               + +L   T    L+ GR+ H   +  G +++  V  +L+DMY K +  + AQ++FD
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD 401

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV----------- 640
           N+  ++ V W ++IS Y  KG       + + M    +  D  ++ S++           
Sbjct: 402 NIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISL 461

Query: 641 ------------------SGYSIWGQSKEALVIIHHMKNSGIYP--NVVTWTSLISGSLQ 680
                             SG ++     +   +   +K+ G  P  N V+W +LIS   Q
Sbjct: 462 GRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQ 521

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           N N   +L  F QM Q   KP+S +  S+L  C   G ++  
Sbjct: 522 NGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEA 563



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
           N N    N  ++ +  +G  V+A ++ +QM  +    + +S N ++SG+  +G+  +A  
Sbjct: 40  NPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK----NTISLNMMISGHLKFGKLSKARE 95

Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
           +   M    +    V+WT LI G LQ+   +E+ + +  M++  I+P+  T+ +LL   G
Sbjct: 96  LFDGM----VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFG 151

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
            L       +IH   +K G+  +  V   L+D Y K+  L  A ++F+   NK   ++N 
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           ++ G++  G  +EAI LF EL  +G +P   TF ALL+A
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/660 (32%), Positives = 367/660 (55%), Gaps = 36/660 (5%)

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            ++  ++  S   HN    NS++++Y   G +  A  +F+         ++++W  L+SG 
Sbjct: 42   QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCK----NVVSWTILISGL 97

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              +  +   + + R M    F+PN  ++S VL A   L L++  +  H + +R G + ++
Sbjct: 98   AKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNV 157

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +V T+L+DMY K  C+  A+++F++M  RN+V+WN+++SGY   G    A  + N M  +
Sbjct: 158  FVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRK 217

Query: 628  EIKPDLVSWNSLV---------------------SGYSIWGQSKEALVII---------- 656
             +  D  +  SL+                     +GY      K AL+ I          
Sbjct: 218  GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGG 715
            H + +     +V  WT +++G     ++  ++K F +M   +++K +S  +  +L +C  
Sbjct: 278  HRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSH 337

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
             G LQ G+ +H L +K  F  + +V + +IDMY+  GNL+ A+  F     K +  WN M
Sbjct: 338  SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I G  + G G +AI LF ++  +G  PD  TF ++L AC ++G+V EG + F  M    +
Sbjct: 398  IAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
             IP ++HY+C++D+LG+AG LD A+ FI  MPF+PD  ++  LLG+CRIHG+++     S
Sbjct: 458  DIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEIS 517

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            +++F++EP ++  Y L+ N+ A++  WE V+  R S+    +K    +S I+I+Q ++ F
Sbjct: 518  QKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTF 577

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    HP   +I   L  L+ ++KK GYVP+T  + QD+ ++ K  +L  H+EK+AI +
Sbjct: 578  MAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAF 637

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GLM+TK    IR+ KN R C+DCH+A+K++S V GR + ++D  RFH F++G CSC D W
Sbjct: 638  GLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 233/542 (42%), Gaps = 103/542 (19%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +I  G   +  L  +LMN Y  C  +  A ++F   +  ++ + W  +I    +N
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHH-TPCKNVVSWTILISGLAKN 100

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           + +  AI +FREM   + K  + TI  +L A A +G     K +H + ++   E N+ V 
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+ MYS+   + +A ++F+SM + N+ SWN+++S Y+  G+ + A  LFN M    + 
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            D  T                +++L+    S+G                    L+ G   
Sbjct: 221 VDFYT----------------IMSLIPASLSVG-------------------CLQVGTGI 245

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           HG+I+R G + D ++ T+LMD+YV ++C+ +A  VF  M  +++ AW  +++G+     +
Sbjct: 246 HGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHW 305

Query: 615 VNAKKMLNQMEE-EEIKPDLVSWNSLV-----SGYSIWGQSKEALVIIHHMKNS------ 662
             A K  N+M   + +K D +    ++     SG    G+   AL I     N+      
Sbjct: 306 DRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSA 365

Query: 663 --GIYPN------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
              +Y N                  VV W ++I+G+  N    +++  F+QM+   + P+
Sbjct: 366 VIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPD 425

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF-IKDAYVATGLIDMYSKSGNLKSAREVF 761
            +T  S+L  C   G++  G +I    +K    I +      +ID+  ++G L +A    
Sbjct: 426 ESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFI 485

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                                                 FQPD   ++ LL AC+  G ++
Sbjct: 486 NNMP----------------------------------FQPDFDVYSTLLGACRIHGNIK 511

Query: 822 EG 823
            G
Sbjct: 512 LG 513



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 131/559 (23%), Positives = 246/559 (44%), Gaps = 46/559 (8%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
           K + L  ++  HAQ+I  G   N+  +  SL+  Y+  G    A + F     ++   W+
Sbjct: 33  KLKDLKPLQQIHAQIITSGLTHNTF-LSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWT 91

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASL 320
             +         V E ++V+ E+      F+   +TI  +L     L    +   VH   
Sbjct: 92  ILISGLAKNDCFV-EAIDVFREMTMGN--FKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++ GF+ +V ++ AL++ Y K   +  A +LF  +S+  + + WN I+     +   E A
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE-RNVVSWNAIVSGYSDHGFSEEA 207

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           I LF  M+         TI+ ++ A   VG    G  IHG+++++  E++  +   L+ +
Sbjct: 208 IDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDI 267

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y  +N ++ A RVF  M   ++++W  M++ ++   + D A   FNKM            
Sbjct: 268 YVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM------------ 315

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                                G+Q+L  + +   +  +L + +    L+ GR  H   ++
Sbjct: 316 --------------------LGIQNL--KLDSIVLMGILSSCSHSGALQQGRRVHALAIK 353

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
                +++VG++++DMY     L++A+  F  M  +++V WN++I+G    G   +A  +
Sbjct: 354 TCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDL 413

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSL 679
             QM+   + PD  ++ S++   S  G   E L I +HM K S   PN+  +  +I    
Sbjct: 414 FLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILG 473

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
           +      +  F   M     +P+    S+LL  C   G ++ G EI     +     DA 
Sbjct: 474 RAGQLDAAYSFINNMP---FQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEME-PNDAG 529

Query: 740 VATGLIDMYSKSGNLKSAR 758
               L +MY+ +GN +  +
Sbjct: 530 YYVLLSNMYALAGNWEGVK 548



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 184/390 (47%), Gaps = 37/390 (9%)

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           P   S + +L+ + +L+ L+   + H  I+ +GL ++ ++  SLM+ YV    L +A+++
Sbjct: 22  PLAQSHASILRKLKDLKPLQ---QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQI 78

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F +   +N+V+W  LISG      FV A  +  +M     KP+ V+ +S++  ++  G  
Sbjct: 79  FHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLI 138

Query: 650 K---------------------EALV----------IIHHMKNSGIYPNVVTWTSLISGS 678
           +                      ALV          +   +  S    NVV+W +++SG 
Sbjct: 139 RIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGY 198

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
             +    E++  F  M+++ +  +  T+ SL+     +G LQ G  IH   ++ G+  D 
Sbjct: 199 SDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDK 258

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
           ++ T L+D+Y     +  A  VF +   K +A+W  M+ GF+   +   AI  F+++L  
Sbjct: 259 HIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGI 318

Query: 799 -GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
              + D+I    +L++C +SG +++G +   +++        I   S ++D+    G L+
Sbjct: 319 QNLKLDSIVLMGILSSCSHSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLE 377

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           +A  F   M  K D   W A++    ++G+
Sbjct: 378 DAKRFFYGMGEK-DVVCWNAMIAGNGMNGY 406


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/610 (35%), Positives = 328/610 (53%), Gaps = 61/610 (10%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M+ L    +   +  VL+A +++ + + G+E HG+ ++NGL  D++V  +LM MY +   
Sbjct: 100  MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGS 159

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYC--FKGL--------------------FVNAKKM 620
            L +A+ +FD M  R++V+W+++I  Y   F G                         +++
Sbjct: 160  LVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERL 219

Query: 621  LNQMEEEEIKPDLVSW-----------------------------------NSLVSGYSI 645
              +M EE + P+ ++                                     +LV  Y  
Sbjct: 220  FVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGK 279

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  I   MKN     +V+TWT++IS   Q      + + F+QM+   ++PN  T
Sbjct: 280  CGEIRSARAIFDSMKNK----DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELT 335

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
            M SLL  C   G L  GK  H    K G   D  + T LIDMY+K G++  A+ +F ++ 
Sbjct: 336  MVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAI 395

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
            ++ + +WN M+ G+ ++G G++A+ LF E+   G +P+ ITF   L AC ++GLV EG  
Sbjct: 396  DRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKG 455

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
             F+ M  D+ ++P +EHY CMVDLLG+AG LDEA+  I +MP  P+  IWGA+L +C+IH
Sbjct: 456  LFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
             +    E+A+R L  LEP N     LM N+ A +NRW DV  +R ++ + G+K     S 
Sbjct: 516  KNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSS 575

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            I+++ +VH F      HP   +I   L  +  ++K+ GY+PDT  V  +IDEEEK   L 
Sbjct: 576  IEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALN 635

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+EKLA+ +GL+ T    PIRV+KN R+C DCHT  K +S +  R I +RD  RFHHFR
Sbjct: 636  YHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFR 695

Query: 1066 EGECSCNDCW 1075
            EG CSC   W
Sbjct: 696  EGSCSCGGYW 705



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 212/466 (45%), Gaps = 48/466 (10%)

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A+  +  M+    +  S  I  +L+AC+++     GK+IHG+ +K+ L S++ V N L+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MYS    L  A  +FD M + ++ SW++MI +Y  L Y    +S          Q  I++
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFY---GFS----------QRSIVS 199

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           W  +++G+      +    L   M      PN  ++  ++ +   +  ++ G+  H YIL
Sbjct: 200 WTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYIL 259

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           RNG    L + T+L+DMY K   +++A+ +FD+MKN++++ W ++IS Y        A +
Sbjct: 260 RNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQ 319

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWG--------------QSKEALVII--------- 656
           +  QM +  ++P+ ++  SL+S  ++ G              Q  E  VI+         
Sbjct: 320 LFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYA 379

Query: 657 --------HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                     + +  I  ++ TW  +++G   +    ++LK F +M+   +KPN  T   
Sbjct: 380 KCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIG 439

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SAN 766
            L  C   GL+  GK +    + + G +        ++D+  ++G L  A ++       
Sbjct: 440 ALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVT 499

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
             +A W  M+    I+ N     L   ELL    +P    +  L++
Sbjct: 500 PNIAIWGAMLAACKIHKNSNMGELAARELL--ALEPQNCGYKVLMS 543



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 199/448 (44%), Gaps = 72/448 (16%)

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           S I+  +LK C+++    +G E+H   +K G   DV +  ALM  Y +C  + SA  LF 
Sbjct: 109 SFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFD 168

Query: 354 EVSDLEDDLL-----------------------WNEIIMVKLRNEKWENAIKLFREMQFS 390
           ++S  E D++                       W  +I   +R    E   +LF  M   
Sbjct: 169 KMS--ERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEE 226

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           +      T++ ++ +C  VGA   GK++H Y+L++    +L++   L+ MY +  ++  A
Sbjct: 227 NVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSA 286

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             +FDSMK+ ++ +W +MIS+Y     +D A+ LF +M  + ++P+ +T   LLS    +
Sbjct: 287 RAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVN 346

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G+                                   L  G+  H YI + G++ D+ + 
Sbjct: 347 GA-----------------------------------LDMGKWFHAYIDKQGVEVDVILK 371

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T+L+DMY K   +  AQ +F    +R+I  WN +++GY   G    A K+  +ME   +K
Sbjct: 372 TALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVK 431

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLIS----GSLQNENYR 685
           P+ +++   +   S  G   E   +   M  + G+ P V  +  ++       L +E Y+
Sbjct: 432 PNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYK 491

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                   ++   + PN     ++L  C
Sbjct: 492 -------MIESMPVTPNIAIWGAMLAAC 512



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 13/267 (4%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  HA +++ G    S  +  +L+  Y + G+  SA   F    ++    W++ +  Y  
Sbjct: 252 KRLHAYILRNG-FGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQ 310

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
               +    +++ ++   GV      +  +L LC    A  +G   HA + K+G + DV 
Sbjct: 311 -ANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVI 369

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           LK AL++ Y KC D+  A +LFSE  D  D   WN ++     +   E A+KLF EM+  
Sbjct: 370 LKTALIDMYAKCGDISGAQRLFSEAID-RDICTWNVMMAGYGMHGYGEKALKLFTEMETL 428

Query: 391 SAKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNN 445
             K    T +  L AC+  G   EG     K IH + L   +E       C++ +  R  
Sbjct: 429 GVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHY----GCMVDLLGRAG 484

Query: 446 KLELATRVFDSMK-DHNLSSWNSMISS 471
            L+ A ++ +SM    N++ W +M+++
Sbjct: 485 LLDEAYKMIESMPVTPNIAIWGAMLAA 511


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Vitis vinifera]
          Length = 684

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/644 (32%), Positives = 347/644 (53%), Gaps = 37/644 (5%)

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
            +N +++ Y+ L   + A  L + +  +R    ++TW  L++G   +G + + L     M+
Sbjct: 45   YNHLVNMYSKLDRPNSAQLLLS-LTPNR---SVVTWTALIAGSVQNGRFTSALFHFSNMR 100

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
                +PN  +     +A   LR    G++ H   ++ G   D++VG S  DMY K    +
Sbjct: 101  RDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTE 160

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---- 640
             A+++FD M  RNI  WN+ +S    +G + +A     +   E  +P+L+++ + +    
Sbjct: 161  EARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACA 220

Query: 641  -SGYSIWGQSKEALVI--------------------IHHMKNSGIY------PNVVTWTS 673
             + Y   G+     V+                     H +  S I       PN V+W S
Sbjct: 221  GASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCS 280

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I   +QN+   ++   F++ ++E I+P    +SS+L  C GL +L+ GK +H L +K  
Sbjct: 281  MIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKAC 340

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
             + + +V + L+DMY K G+++ A   F +   + L +WN MI G+A  G    A+ LF 
Sbjct: 341  VVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFD 400

Query: 794  ELLETGFQ--PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            E+     +  P+ +TF  +L+AC  +G V  G + F+SM   Y I P  EHY+C+VDLLG
Sbjct: 401  EMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLG 460

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG +++A+ FI+ MP +P  ++WGALLG+ ++ G  E  ++A+  LF+L+P +S N+ L
Sbjct: 461  RAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVL 520

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ A + RWE+   +R  M +VG+K     SWI     VHVF A+   H    EI   
Sbjct: 521  LSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAM 580

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            L  L  EM+  GY+PDT     D++EEEK   +  H+EK+A+ +GL+   +  PIR+ KN
Sbjct: 581  LAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKN 640

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             R+C DCH+A K++S + GREI +RD   FH FR+ +CSC D W
Sbjct: 641  LRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 164/351 (46%), Gaps = 12/351 (3%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
           C    +   R     K  HA  +K G+I  SD  V    F  Y + G    A K F    
Sbjct: 113 CAFKASGSLRSPLVGKQVHALAVKAGQI--SDVFVGCSAFDMYSKAGLTEEARKMFDEMP 170

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWL 312
            R+ A W+++L +     G   + L  + E   +G  +   ++T    L  C       L
Sbjct: 171 ERNIATWNAYLSN-SVLEGRYDDALTAFIEFRHEG--WEPNLITFCAFLNACAGASYLRL 227

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++H  +++ GF+ DV +   L++FYGKC  V  +  +FS +S   +D+ W  +I+  +
Sbjct: 228 GRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISK-PNDVSWCSMIVSYV 286

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +N++ E A  +F   +    +     +  +L ACA +     GK +H   +K+ +  N+ 
Sbjct: 287 QNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIF 346

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN--S 490
           V + L+ MY +   +E A R FD M + NL +WN+MI  Y   G  D+A +LF++M   S
Sbjct: 347 VGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGS 406

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQ 540
            R+ P+ +T+ C+LS     GS    + +   M+   G  P     + V+ 
Sbjct: 407 HRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVD 457



 Score = 48.5 bits (114), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 9/199 (4%)

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSA 757
           + PNS  ++SL+++       + G+  H   +K       +++   L++MYSK     SA
Sbjct: 4   LSPNS--LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
           + +   + N+++ +W  +I G    G    A+  F  +     QP+  TF     A K S
Sbjct: 62  QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFP---CAFKAS 118

Query: 818 GLVEEGW--KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
           G +      K   +++     I  +       D+  KAG  +EA      MP +  AT W
Sbjct: 119 GSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIAT-W 177

Query: 876 GALLGSCRIHGHLEYAEIA 894
            A L +  + G  + A  A
Sbjct: 178 NAYLSNSVLEGRYDDALTA 196


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 249/838 (29%), Positives = 410/838 (48%), Gaps = 78/838 (9%)

Query: 233  LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG-GEVQELLEVWGELHGKGVI 291
            LI  Y + G    A + F    +R    W + L  Y   G GE  E L ++ ++H  GV+
Sbjct: 83   LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGE--EALGLYRQMHRAGVV 140

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +L+ +L  CTK   F  G  +HA   K GF  ++ +  A++  Y +C     A ++
Sbjct: 141  PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F ++    D + +N +I    +    E+A+++F EMQFS       TI  +L ACA +G 
Sbjct: 201  FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              +G Q+H Y+ K+ + S+  +   L+ +Y +                            
Sbjct: 260  LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK---------------------------- 291

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                G V+ A  +FN  + +    +++ WN +L              L   MQ+ G RPN
Sbjct: 292  ---CGDVETALVIFNSSDRT----NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L+  T  R +  G + H   ++ G + D+YV   L+DMY K   L+ A+ V +
Sbjct: 345  QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS---------------- 635
             +K +++V+W S+I+GY       +A     +M++  I PD +                 
Sbjct: 405  MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 636  -------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                               WN+LV+ Y+  G+ +EA      M+      + +T   L+S
Sbjct: 465  GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEME----LKDGITGNGLVS 520

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G  Q+  + E+LK F++M Q  +K N  T  S L     L  ++ GK+IH   +K G   
Sbjct: 521  GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF 580

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            +  V   LI +Y K G+ + A+  F + + +   SWN +I   + +G G EA+ LF ++ 
Sbjct: 581  ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
            + G +P+ +TF  +LAAC + GLVEEG  YF SMS +Y I P  +HY+C++D+ G+AG L
Sbjct: 641  KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
            D A  FI  MP   DA +W  LL +C++H ++E  E A++ L +LEP +SA+Y L+ N  
Sbjct: 701  DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A++ +W + +++R  M + GV+     SWI++  +VH F      HP   +IY  L  + 
Sbjct: 761  AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
              + K+GY  +   ++ D ++E +    L H+EKLA+ +GLM      P+RVIKN RV
Sbjct: 821  DRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 223/520 (42%), Gaps = 85/520 (16%)

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IH   +   L     V N LI +YS+N  +  A RVF+ +   +  SW +M+S Y   G
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  L+ +M+ +                                   G  P    +S
Sbjct: 123 LGEEALGLYRQMHRA-----------------------------------GVVPTPYVLS 147

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL + T+  L   GR  H    ++G   +++VG +++ +Y++    + A+ VF +M +R
Sbjct: 148 SVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR 207

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------------- 642
           + V +N+LISG+   G   +A ++  +M+   + PD V+ +SL++               
Sbjct: 208 DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLH 267

Query: 643 ---------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                                Y   G  + ALVI     NS    NVV W  ++    Q 
Sbjct: 268 SYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF----NSSDRTNVVLWNLMLVAFGQI 323

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
            +  +S + F QMQ   I+PN  T   +L+TC     +  G++IH L +K GF  D YV+
Sbjct: 324 NDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVS 383

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             LIDMYSK G L+ AR V      K + SW  MI G+  +   K+A+  F E+ + G  
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW 443

Query: 802 PDAITFTALLAACKNSGLVEEGWK-----YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
           PD I   + ++ C     + +G +     Y    S D +I      ++ +V+L  + G +
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI------WNALVNLYARCGRI 497

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
            EA+     M  K   T  G + G  +   H E  ++  R
Sbjct: 498 REAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMR 537



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 3/218 (1%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL-QNGKEIHCLCLKNG 733
           ++G L +E+  + L  F    ++         +  L+ C G G   Q   EIH   +  G
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
             K   V   LID+YSK+G +  AR VF + + +   SW  M+ G+A  G G+EA+ L+ 
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
           ++   G  P     +++L++C  + L  +G +   +    +     I   + ++ L  + 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           G    A      MP + D   +  L+      GH E+A
Sbjct: 192 GSFRLAERVFCDMPHR-DTVTFNTLISGHAQCGHGEHA 228


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 240/731 (32%), Positives = 389/731 (53%), Gaps = 67/731 (9%)

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           G GV         ++K CT L    LG  +   +++ GFD D+ +  +L+  Y     +E
Sbjct: 3   GCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIE 62

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            A + F ++ D +D +LWN +I   ++  + ++AIKLF++M  S AK  S T   +L   
Sbjct: 63  DARRFFDKMID-KDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSIS 121

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
                   G+Q+HG V++S L+    V N L+++YS+  +L  A ++FD M   +L  WN
Sbjct: 122 CSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWN 181

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
            MI  Y   G++D A  LFN+M S+ I+PD IT+   L                      
Sbjct: 182 RMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLP--------------------- 220

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
                         ++ E   LK  +E HGYI+R+G+  D+Y+ ++L+D+Y K      A
Sbjct: 221 --------------SLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMA 266

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS----- 641
            ++F+     +IV + ++ISGY   G+  +A ++   + ++++ P+ ++++S++      
Sbjct: 267 CKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGL 326

Query: 642 ----------GYSIWGQSKEA----------------LVIIHHMKNSGIYPNVVTWTSLI 675
                     GY I  + +E                 L + H +       + + W S+I
Sbjct: 327 AAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSII 386

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
           +   Q+    E++  F QM  E +K +  T+S+ L  C  +  L  GKEIH   +K  F 
Sbjct: 387 TSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFE 446

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
            D +  + LI+MY+K G L  AR VF     K   +WN +I  +  +G   +++ LFH +
Sbjct: 447 SDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNM 506

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           LE G QPD ITF  +L++C ++G VE+G +YF  M+ +Y I   +EHY+CM DL G+AG+
Sbjct: 507 LEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGH 566

Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
           LDEA++ I +MPF P A++WG LLG+CR+HG++E AE+ASR L  LEP NS  Y L+ ++
Sbjct: 567 LDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHV 626

Query: 916 LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
           LA + +W  V +++H M E GV+ V   SWI+++    VF A    HP + +IY  L  L
Sbjct: 627 LADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIYSLLKSL 686

Query: 976 VSEMKKLGYVP 986
           + E++K+GYVP
Sbjct: 687 LLELRKVGYVP 697



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 169/327 (51%), Gaps = 3/327 (0%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
           FL    +   L  +K  H  +++ G I +   +  +LI  Y +  D   A K F L    
Sbjct: 218 FLPSLAESSSLKQIKEIHGYIVRHGVILDVY-LNSALIDLYFKCRDAVMACKMFNLSTKF 276

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               +++ +  Y    G  ++ LE++  L  K +I  +   + IL  C  L A  LG E+
Sbjct: 277 DIVIYTAMISGY-VLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGREL 335

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H  +IK   +    +  A+MN Y KC  ++ A+ +F  +S ++D + WN II    ++ K
Sbjct: 336 HGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRIS-IKDAICWNSIITSFSQDGK 394

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            E AI LFR+M     K    T+   L ACA + A H GK+IHG+++K A ES+L   + 
Sbjct: 395 PEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSA 454

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+MY++  KL +A  VF+ M++ N  +WNS+I++Y   GY+  + +LF+ M    IQPD
Sbjct: 455 LINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPD 514

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGM 523
            IT+  +LS     G  ++ +   R M
Sbjct: 515 HITFLTILSSCGHAGQVEDGVRYFRCM 541



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 188/415 (45%), Gaps = 49/415 (11%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M   G  P+  +   V++  T L  ++ G+     IL  G D D++V +SL+ +Y  N C
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------ 636
           +++A+  FD M +++ V WN +I+GY   G   +A K+   M   E KPD V++      
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 637 -----------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                        N+LV+ YS   Q  +A  +   M       +
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQI----D 176

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           +V W  +I G +QN    ++   F +M    IKP+S T +S L +      L+  KEIH 
Sbjct: 177 LVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHG 236

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
             +++G I D Y+ + LID+Y K  +   A ++F  S    +  +  MI G+ + G  K+
Sbjct: 237 YIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKD 296

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY---- 843
           A+ +F  LL+    P+A+TF+++L AC     ++ G +        Y I   +E      
Sbjct: 297 ALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELH-----GYIIKNELEEKCPVG 351

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
           S ++++  K G LD A      +  K DA  W +++ S    G  E A    R++
Sbjct: 352 SAIMNMYAKCGRLDLAHLIFGRISIK-DAICWNSIITSFSQDGKPEEAIYLFRQM 405


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/734 (32%), Positives = 364/734 (49%), Gaps = 80/734 (10%)

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A  +FS +    + +++N  +    R+ +    I  ++ ++    +    + + +L+A +
Sbjct: 63   ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122

Query: 408  KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            KV A  EG ++HG   K A   +  V    + MY+   ++  A  VFD M   ++ +WN+
Sbjct: 123  KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            MI  Y   G VD A+ LF +M  S + PD +    ++S     G+               
Sbjct: 183  MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN--------------- 227

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
                                ++Y R  + +++ N +  D ++ T+L+ MY    C+  A+
Sbjct: 228  --------------------MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            E F  M  RN+    +++SGY   G   +A+ + +Q E    K DLV W +++S Y    
Sbjct: 268  EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE----KKDLVCWTTMISAYVESD 323

Query: 648  QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
              +EAL +   M  SGI P+VV+  S+IS                               
Sbjct: 324  YPQEALRVFEEMCCSGIKPDVVSMFSVISA------------------------------ 353

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
                 C  LG+L   K +H     NG   +  +   LI+MY+K G L + R+VF K   +
Sbjct: 354  -----CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             + SW+ MI   +++G   +A+ LF  + +   +P+ +TF  +L  C +SGLVEEG K F
Sbjct: 409  NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
             SM+ +YNI P +EHY CMVDL G+A  L EA + I +MP   +  IWG+L+ +CRIHG 
Sbjct: 469  ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            LE  + A++R+ +LEP +     LM N+ A   RWEDV  +R  M+E  V      S I 
Sbjct: 529  LELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
             +   H F      H  + EIY +L  +VS++K  GYVPD   V  D++EEEK  ++L H
Sbjct: 589  QNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWH 648

Query: 1008 TEKLAIVYGLM------KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            +EKLA+ +GLM      +  S   IR++KN RVC DCH   K +S V  REI +RD  RF
Sbjct: 649  SEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRF 708

Query: 1062 HHFREGECSCNDCW 1075
            H ++ G CSC D W
Sbjct: 709  HCYKNGLCSCRDYW 722



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 201/425 (47%), Gaps = 9/425 (2%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ILK  +K+ A + G+E+H    K     D  ++   M+ Y  C  +  A  +F E+S   
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH-R 175

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + WN +I    R    + A KLF EM+ S+       +  ++ AC + G     + I+
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            +++++ +  +  +   L++MY+    +++A   F  M   NL    +M+S Y+  G +D
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  +F++      + D++ W  ++S +      Q  L +   M   G +P+  S+  V+
Sbjct: 296 DAQVIFDQTE----KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A   L +L   +  H  I  NGL+ +L +  +L++MY K   L   ++VF+ M  RN+V
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +W+S+I+     G   +A  +  +M++E ++P+ V++  ++ G S  G  +E   I   M
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471

Query: 660 KNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            +   I P +  +  ++    +    RE+L+    M    +  N     SL+  C   G 
Sbjct: 472 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP---VASNVVIWGSLMSACRIHGE 528

Query: 719 LQNGK 723
           L+ GK
Sbjct: 529 LELGK 533


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/785 (29%), Positives = 402/785 (51%), Gaps = 82/785 (10%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
            +V L   ++  YGKC  V SA   F  ++  ++D  W  ++    +N  +  A+ L++ M
Sbjct: 57   NVFLGNEIVRAYGKCGSVASARVAFDAIAR-KNDYSWGSMLTAYAQNGHYRAALDLYKRM 115

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNK 446
                   +  T+   L ACA + A  EGK IH  +  +  L+ ++ + N L++MY++   
Sbjct: 116  DLQPNPVVYTTV---LGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172

Query: 447  LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            LE A R                               LF +M+  R    + +WN +++ 
Sbjct: 173  LEDAKR-------------------------------LFERMSGRR---SVSSWNAMIAA 198

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            +   G ++  + L   M      P+  + + VL A + L LL  GR+ H  I   G + D
Sbjct: 199  YAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELD 255

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            L +  +L+ MY +  CL +A ++F  +  R++V+W+++I+ +    LF  A +  ++M+ 
Sbjct: 256  LSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQL 315

Query: 627  EEIKPD-----------------------------------LVSWNSLVSGYSIWGQSKE 651
            E ++P+                                   LV+  +LV  Y+ +G   E
Sbjct: 316  EGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDE 375

Query: 652  ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM-SSLL 710
            A  +   ++N     +   WT LI G  +  +    L+ + +M+     P +  + S ++
Sbjct: 376  ARSLFDQIENR----DEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVI 431

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              C  LG   + ++ H     +G I D  +AT L++MYS+ GNL+SAR+VF K +++   
Sbjct: 432  SACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTL 491

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +W  +I G+A +G    A+ L+ E+   G +P  +TF  +L AC ++GL E+G + F S+
Sbjct: 492  AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI 551

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
             +DY + P I HYSC++DLL +AG L +A + I  MP +P+   W +LLG+ RIH  ++ 
Sbjct: 552  QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKR 611

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
            A  A+ ++ KL+P + A+Y L+ N+ A++     +  +R++M   GVK     SWI++  
Sbjct: 612  ATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVAD 671

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             +H F+     HP   EI+ EL  L  ++K+ GYVP++  V  D+ E+EK  +L  H+EK
Sbjct: 672  QIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEK 731

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LAI +GL+ T     +R+    R+C DCH+A K++S +  REI +RD +RFH FR+G+CS
Sbjct: 732  LAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCS 791

Query: 1071 CNDCW 1075
            C D W
Sbjct: 792  CGDYW 796



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 261/598 (43%), Gaps = 91/598 (15%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG--ELHGKGV 290
           ++  Y + G   SA  AF     ++   W S L  Y    G  +  L+++   +L    V
Sbjct: 64  IVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQ-NGHYRAALDLYKRMDLQPNPV 122

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLI-KRGFDFDVHLKCALMNFYGKCRDVESAN 349
           ++     T +L  C  + A   G  +H+ +   +G   DV L+ +L+  Y KC  +E A 
Sbjct: 123 VY-----TTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK 177

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           +LF  +S       WN +I    ++  +E AI+L+ +M    +    RT   +L AC+ +
Sbjct: 178 RLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPS---VRTFTSVLSACSNL 234

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G   +G++IH  +     E +LS+ N L++MY+R   L+ A ++F  +   ++ SW++MI
Sbjct: 235 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 294

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           +++      D A   ++KM                                   Q  G R
Sbjct: 295 AAFAETDLFDEAIEFYSKM-----------------------------------QLEGVR 319

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           PN  + + VL A   +  L+ GR  H  IL NG    L  GT+L+D+Y     L  A+ +
Sbjct: 320 PNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSL 379

Query: 590 FDNMKNRNIVAWNSLISGYCFK------------------------------------GL 613
           FD ++NR+   W  LI GY  +                                    G 
Sbjct: 380 FDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGA 439

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
           F +A++  + +E + +  D V   SLV+ YS WG  + A  +   M +     + + WT+
Sbjct: 440 FADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSR----DTLAWTT 495

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           LI+G  ++  +  +L  + +M+ E  +P+  T   +L  C   GL + GK++  + +++ 
Sbjct: 496 LIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSD 554

Query: 734 FIKDAYVA--TGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEA 788
           +     +A  + +ID+ S++G L  A E+           +W+ ++    I+ + K A
Sbjct: 555 YAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRA 612


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
            [Cucumis sativus]
          Length = 673

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/632 (35%), Positives = 350/632 (55%), Gaps = 36/632 (5%)

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
             G V+ A   F +++    +PDI+ WN ++ G+         + +   MQ     PN  +
Sbjct: 47   FGDVNYAHKAFREVS----EPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFT 102

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
               VL+A     +   G++ HG   + G   +++V  SL+ MY K   +  A+ VFD + 
Sbjct: 103  FLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH 162

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY----------S 644
            +R +V+W S+ISGY   G  + A  +  +M +  +KPD ++  S+++ Y          S
Sbjct: 163  DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKS 222

Query: 645  IWG--------------------QSKEALV-IIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            I G                     +K  LV +     N    PN++ W ++ISG   N  
Sbjct: 223  IHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGY 282

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              E++K F +M  ++I+ +S TM S +     +G L+  + +     K+ +  D +V TG
Sbjct: 283  GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTG 342

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            LIDMY+K G++  AR VF + A+K +  W+ MIMG+ ++G+G+EAI L++E+ + G  P+
Sbjct: 343  LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 402

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
              TF  LL ACKNSGLV+EGW+ F  M  D+ I P  +HYSC+VDLLG+AGYL++A+DFI
Sbjct: 403  DGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI 461

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
             +MP KP  ++WGALL +C+IH  +   EIA+ +LF L+P N+ +Y  + NL A ++ W 
Sbjct: 462  MSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWT 521

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
             V  +R  M + G+   L  S I+I+  +  F      HP + EI+ EL  L   +K  G
Sbjct: 522  RVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAG 581

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            YVP    V  D++ EE  + L  H+E+LA+ YG++ T     +R+ KN R C +CH+A K
Sbjct: 582  YVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIK 641

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +S +  REI +RD  RFHHF++G CSC D W
Sbjct: 642  LISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 210/481 (43%), Gaps = 77/481 (16%)

Query: 315 EVHASLIKRGFDFDVHLKCA--LMNFYGKC---RDVESANKLFSEVSDLEDDLLWNEIIM 369
           +V+  LI  G       KC   ++ F   C    DV  A+K F EVS+  D LLWN II 
Sbjct: 20  QVYVQLIVSGLH-----KCRFLMIKFINACLHFGDVNYAHKAFREVSE-PDILLWNAIIK 73

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
              +    +  I+++ +MQ S       T + +L+AC        GKQIHG   K    S
Sbjct: 74  GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGS 133

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           N+ V N L+SMY++  ++  A  VFD + D  + SW S+IS Y   G    A ++F +M 
Sbjct: 134 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 193

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
              ++PD   W  L+S                                V+ A T +  L 
Sbjct: 194 QCNVKPD---WIALVS--------------------------------VMTAYTNVEDLG 218

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G+  HG + + GL+++  +  SL  MY K   ++ A+  F+ M+  N++ WN++ISGY 
Sbjct: 219 QGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYA 278

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---------------SGYSIWGQSKEAL- 653
             G    A K+  +M  + I+ D ++  S V                GY    + ++   
Sbjct: 279 NNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTF 338

Query: 654 ----VIIHHMKNSGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
               +I  + K   IY            +VV W+ +I G   + + +E++  + +M+Q  
Sbjct: 339 VNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG 398

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           + PN  T   LL  C   GL++ G E+  L   +G        + ++D+  ++G L  A 
Sbjct: 399 VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 458

Query: 759 E 759
           +
Sbjct: 459 D 459



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 232/532 (43%), Gaps = 48/532 (9%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           L FGD   A KAF          W++ ++ Y      V   + ++ ++    V       
Sbjct: 45  LHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQ-KNIVDAPIRMYMDMQISQVHPNCFTF 103

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
             +LK C       +G ++H    K GF  +V ++ +L++ Y K   +  A  +F ++ D
Sbjct: 104 LYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD 163

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
               + W  II   ++N     A+ +F+EM+  + K     +V ++ A   V    +GK 
Sbjct: 164 -RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKS 222

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IHG V K  LE    +   L +MY++   +E+A   F+ M+  NL  WN+MIS Y   GY
Sbjct: 223 IHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGY 282

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            + A  LF +M +  I+ D IT                                    S 
Sbjct: 283 GEEAIKLFREMITKNIRVDSITMR----------------------------------SA 308

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           VL A  ++  L+  R   GYI ++    D +V T L+DMY K   +  A+ VFD + +++
Sbjct: 309 VL-ASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKD 367

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           +V W+ +I GY   G    A  + N+M++  + P+  ++  L++     G  KE   + H
Sbjct: 368 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 427

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            M + GI P+   ++ ++    +     ++  F + M    IKP  +   +LL  C    
Sbjct: 428 LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMP---IKPGVSVWGALLSACKIHR 484

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            ++ G+    +  +  FI D Y  TG    Y +  NL ++  ++ + AN  L
Sbjct: 485 KVRLGE----IAAEQLFILDPY-NTG---HYVQLSNLYASAHLWTRVANVRL 528


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/744 (29%), Positives = 392/744 (52%), Gaps = 67/744 (9%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            W  +I   L++ + + A +L+ +M+    +    T+V +L    ++   +   QIH +V+
Sbjct: 108  WTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVI 167

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            K   E NL VCN L+  Y + + L LA++                               
Sbjct: 168  KLGYEYNLMVCNSLVDAYCKTHCLYLASQ------------------------------- 196

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            LF  M    +  D +T+N L++G+   G  +  + L   + + G +P+  + + +L A  
Sbjct: 197  LFKHM----LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAV 252

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
             L   K+G++ HG++L+    ++++VG +L+D Y K+D +    ++F  M   + +++N 
Sbjct: 253  GLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNV 312

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---------------------G 642
            +I+ Y + G F  +  +  +++          + +L+S                     G
Sbjct: 313  VITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG 372

Query: 643  YSIWGQSKEALVIIHHMKNSG-----IYPNV-----VTWTSLISGSLQNENYRESLKFFI 692
             +   + + ALV ++   N       I+ N+     V WT++IS  +Q   + E +  F 
Sbjct: 373  ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFS 432

Query: 693  QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
             M++  +  +  T +S+L+ C  L  +  G+++H L +++GF+ + Y  + L+D Y+K G
Sbjct: 433  DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492

Query: 753  NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
             +  A + F +   +   SWN +I  +A  GN    +  F +++++G++PD+++F ++L+
Sbjct: 493  CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552

Query: 813  ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            AC + G VEE   +F+SM+  Y + P  EHY+ MVD+L + G  DEA   +  MPF+P  
Sbjct: 553  ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSE 612

Query: 873  TIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHS 931
             +W ++L SCRIH + E A+ A+ RLF +E   ++A Y  M N+ A++ +W++V +++ +
Sbjct: 613  IMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKA 672

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M + GV+ V  +SW++I    HVFSA    HP   +I  ++  L  EM+K GY PDT C 
Sbjct: 673  MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCA 732

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+DE  K + L  H+E+ AI + LM T   +PI V+KN R C+DCH A K +S +  R
Sbjct: 733  LHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVER 792

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD +RFHHF++G CSC D W
Sbjct: 793  EIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/522 (23%), Positives = 224/522 (42%), Gaps = 70/522 (13%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  +L+FG  + A + F     R+   W+  +  Y     + +E   ++ ++   G+  
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQ-SNQSKEAFRLYADMRRGGIEP 138

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               L  +L    +L    + V++H  +IK G+++++ +  +L++ Y K   +  A++LF
Sbjct: 139 DYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLF 198

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKW-ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
             +  L  D +    +M    NE   E AI+LF E+  S  K    T   +L A   +  
Sbjct: 199 KHM--LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+Q+HG+VLK+    N+ V N L+  YS++++++   ++F  M + +  S+N +I+S
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITS 316

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y                           WN         G ++    L R +Q   F   
Sbjct: 317 Y--------------------------AWN---------GQFKESFDLFRKLQFTRFDRR 341

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
               + +L   T    L+ GR+ H   +  G +++  V  +L+DMY K +  + AQ++FD
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD 401

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV----------- 640
           N+  ++ V W ++IS Y  KG       + + M    +  D  ++ S++           
Sbjct: 402 NIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISL 461

Query: 641 ------------------SGYSIWGQSKEALVIIHHMKNSGIYP--NVVTWTSLISGSLQ 680
                             SG ++     +   +   +K+ G  P  N V+W +LIS   Q
Sbjct: 462 GRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQ 521

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           N N   +L  F QM Q   KP+S +  S+L  C   G ++  
Sbjct: 522 NGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEA 563



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 141/293 (48%), Gaps = 3/293 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H  ++K   +WN   +  +L+ +Y +        K F+         ++  +  Y ++ G
Sbjct: 264 HGFVLKTNFVWNVF-VGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSY-AWNG 321

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           + +E  +++ +L       R      +L + T  +   +G ++H   I  G +F+  ++ 
Sbjct: 322 QFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN 381

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL++ Y KC   + A K+F  ++  +  + W  +I   ++  K E  I +F +M+ +   
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVP 440

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A   T   +L+ACA + +   G+Q+H  +++S   SN+   + L+  Y++   +  A + 
Sbjct: 441 ADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           F  M + N  SWN++IS+Y   G VD   + F +M  S  +PD +++  +LS 
Sbjct: 501 FGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSA 553



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
           N N    N  ++ +  +G  V+A ++ +QM  +    + +S N ++SG+  +G+  +A  
Sbjct: 40  NPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK----NTISLNMMISGHLKFGKLSKARE 95

Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
           +   M    +    V+WT LI G LQ+   +E+ + +  M++  I+P+  T+ +LL   G
Sbjct: 96  LFDGM----VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFG 151

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
            L       +IH   +K G+  +  V   L+D Y K+  L  A ++F+   NK   ++N 
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           ++ G++  G  +EAI LF EL  +G +P   TF ALL+A
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 272/841 (32%), Positives = 410/841 (48%), Gaps = 127/841 (15%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            E+H   IK GF  ++ L   L+N Y +  D+ SA KLF E+S+  + + W  +I    +N
Sbjct: 120  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSN-RNLVTWACLISGYTQN 178

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG--AFHEGKQIHGYVLKSALESNLS 432
             K + A   FR+M  +            L+AC + G      G QIHG + K+   S++ 
Sbjct: 179  GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 238

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            VCN LISMY                    L S N   S + G+G                
Sbjct: 239  VCNVLISMYGSC-----------------LDSANDARSVFDGIGI--------------- 266

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG----FRPNGSSVSVVLQAVTELRLL 548
               + I+WN ++S +   G   +   L   MQ  G    F+PN         A +E  +L
Sbjct: 267  --RNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPN--------DAFSEFSVL 316

Query: 549  ----KYGRESHGYILRNGL-DYDLYVGTSLMDMYVK------------------------ 579
                + GRE H +++R GL D  + +G  L++MY K                        
Sbjct: 317  EEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNS 376

Query: 580  -------NDCLQNAQEVFDNMKNRNIVAWNSLISGYC----------------FKG---- 612
                   N+C ++A E+F  M   + V+WNS+I                     +G    
Sbjct: 377  LISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGL 436

Query: 613  ---LFVNAKKMLNQMEEEEIK-------------PDLVSWNSLVSGYSIWGQSKEALVII 656
                F+N    ++ +   E+               D    N+L+S Y   G+  E   I 
Sbjct: 437  SRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF 496

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
              M  +    + V+W S+ISG + NE   +++     M Q+  + +S T +++L  C  +
Sbjct: 497  ARMSET---RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASV 553

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
              L+ G E+H   ++     D  V + L+DMYSK G +  A   F     + + SWN MI
Sbjct: 554  ATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMI 613

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G+A +G+G++A+ LF  ++  G  PD +TF  +L+AC + G VEEG+++F SMS  Y +
Sbjct: 614  SGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRL 673

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS-CRIHG-HLEYAEIA 894
             P +EH+SCMVDLLG+AG LDE  DFI +MP KP+  IW  +LG+ CR +G + E    A
Sbjct: 674  SPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRA 733

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            +  L +LEP N+ NY L+ N+ A   +WEDV + R +M E  VK     SW+ +   VHV
Sbjct: 734  AEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHV 793

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F A    HP    IY +L  L  +M+  GY+P T+    D++ E K ++L  H+EK+A+ 
Sbjct: 794  FVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVA 853

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            + L + +S  PIR++KN RVC DCH+A  Y+S + GR+I LRD  RFHHF +G+CSC D 
Sbjct: 854  FVLTR-QSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDY 912

Query: 1075 W 1075
            W
Sbjct: 913  W 913



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 145/610 (23%), Positives = 259/610 (42%), Gaps = 66/610 (10%)

Query: 164 PNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFR---CLSSVKSKHAQMIKM 220
           PN  T S   L +    T       +  SS   F +  N+++   C    +  H Q IK 
Sbjct: 70  PNQCTKSLQDL-VDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKY 128

Query: 221 GKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLE 280
           G + N   +  +LI  Y+  GD  SA K F    +R+   W+  +  Y    G+  E   
Sbjct: 129 GFVGNLF-LSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ-NGKPDEACA 186

Query: 281 VWGELHGKGVIFRSRILTIILKLCTK--LMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
            + ++   G I         L+ C +       LGV++H  + K  +  DV +   L++ 
Sbjct: 187 RFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISM 246

Query: 339 YGKCRD-VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ-----FSSA 392
           YG C D    A  +F  +  + + + WN II V  R     +A  LF  MQ     FS  
Sbjct: 247 YGSCLDSANDARSVFDGIG-IRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFK 305

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN-LSVCNCLISMYSRNNKLELAT 451
              + +   +L+   +     +G+++H +V+++ L  N +++ N L++MY+++  +  A 
Sbjct: 306 PNDAFSEFSVLEEGRR-----KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADAC 360

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTH 510
            VF+ M + +  SWNS+IS        + A  +F+ M     + D ++WN ++     + 
Sbjct: 361 SVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMP----EYDQVSWNSVIGALSDSE 416

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
            S    +     M   G+  +  +   +L AV+ L L +   + H  +L+  L  D  +G
Sbjct: 417 ASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG 476

Query: 571 TSLMDMYVKNDCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE- 628
            +L+  Y K   +   +++F  M + R+ V+WNS+ISGY    L   A  ++  M ++  
Sbjct: 477 NALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQ 536

Query: 629 ----------------------------------IKPDLVSWNSLVSGYSIWGQSKEALV 654
                                             ++ D+V  ++LV  YS  G+   A  
Sbjct: 537 RLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASR 596

Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
               M       NV +W S+ISG  ++ +  ++LK F +M  +   P+  T   +L  C 
Sbjct: 597 FFELMP----LRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS 652

Query: 715 GLGLLQNGKE 724
            +G ++ G E
Sbjct: 653 HVGFVEEGFE 662



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 205/495 (41%), Gaps = 79/495 (15%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R+   W+S +  Y   G  V    +++  +  +G+ F  +      +          G E
Sbjct: 267 RNSISWNSIISVYSRRGDAVSAY-DLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGRE 325

Query: 316 VHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           VHA +I+ G  D  V +   L+N Y K   +  A  +F E+   +D + WN +I    +N
Sbjct: 326 VHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF-ELMVEKDSVSWNSLISGLDQN 384

Query: 375 EKWENAIKLFREM------------------QFSSAKAI-------------SR-TIVKM 402
           E  E+A ++F  M                  + S ++A+             SR T + +
Sbjct: 385 ECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINI 444

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L A + +       QIH  VLK  L  + ++ N L+S Y +                   
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGK------------------- 485

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
                        G ++    +F +M+ +R   D ++WN ++SG+  +      + L+  
Sbjct: 486 ------------CGEMNECEKIFARMSETR---DEVSWNSMISGYIHNELLHKAMDLVWF 530

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M   G R +  + + +L A   +  L+ G E H   +R  L+ D+ VG++L+DMY K   
Sbjct: 531 MMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGR 590

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           +  A   F+ M  RN+ +WNS+ISGY   G    A K+  +M  +   PD V++  ++S 
Sbjct: 591 IDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSA 650

Query: 643 YSIWGQSKEALVIIHHMKN-SGIY---PNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            S  G  +E      H K+ S +Y   P V  ++ ++    +     E   F   M    
Sbjct: 651 CSHVGFVEEGF---EHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMP--- 704

Query: 699 IKPNSTTMSSLLQTC 713
           +KPN     ++L  C
Sbjct: 705 MKPNVLIWRTVLGAC 719



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 138/322 (42%), Gaps = 52/322 (16%)

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            RE H   ++ G   +L++  +L+++YV+   L +AQ++FD M NRN+V W  LISGY  
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 177

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL-VIIHHMKNSGIYP--- 666
            G    A      M      P+  ++ S +      G S   L V IH + +   Y    
Sbjct: 178 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 237

Query: 667 ------------------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
                                         N ++W S+IS   +  +   +   F  MQ+
Sbjct: 238 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 297

Query: 697 EDI----KPNST-TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYS 749
           E +    KPN   +  S+L+        + G+E+H   ++ G + D  VA   GL++MY+
Sbjct: 298 EGLGFSFKPNDAFSEFSVLEEG-----RRKGREVHAHVIRTG-LNDNKVAIGNGLVNMYA 351

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           KSG +  A  VF     K   SWN +I G       ++A  +F  + E     D +++ +
Sbjct: 352 KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEY----DQVSWNS 407

Query: 810 LLAACKNS-GLVEEGWKYFDSM 830
           ++ A  +S   V +  KYF  M
Sbjct: 408 VIGALSDSEASVSQAVKYFLQM 429



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 67/117 (57%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +S T  SL+    G    +  +E+H   +K GF+ + +++  LI++Y + G+L SA+++F
Sbjct: 98  SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLF 157

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            + +N+ L +W C+I G+   G   EA   F +++  GF P+   F + L AC+ SG
Sbjct: 158 DEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Glycine max]
          Length = 882

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 245/745 (32%), Positives = 376/745 (50%), Gaps = 77/745 (10%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN ++    +   ++ A+ L+  M +   K    T   +L+ C  +     G++IH +V+
Sbjct: 175  WNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVI 234

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            +   ES++ V N LI+MY +   +  A  VFD M + +  SWN+MIS Y   G       
Sbjct: 235  RYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLR 294

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            LF  M    + PD++T                                 +SV    + + 
Sbjct: 295  LFGMMIKYPVDPDLMTM--------------------------------TSVITACELLG 322

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            + RL   GR+ HGY+LR     D  +  SL+ MY     ++ A+ VF   + R++V+W +
Sbjct: 323  DDRL---GRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTA 379

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKPD------------------------------- 632
            +ISGY    +   A +    ME E I PD                               
Sbjct: 380  MISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKG 439

Query: 633  LVSW----NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
            LVS+    NSL+  Y+      +AL I H    S +  N+V+WTS+I G   N    E+L
Sbjct: 440  LVSYSIVANSLIDMYAKCKCIDKALEIFH----STLEKNIVSWTSIILGLRINNRCFEAL 495

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
             FF +M +  +KPNS T+  +L  C  +G L  GKEIH   L+ G   D ++   ++DMY
Sbjct: 496  FFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMY 554

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
             + G ++ A + F  S +  + SWN ++ G+A  G G  A  LF  ++E+   P+ +TF 
Sbjct: 555  VRCGRMEYAWKQFF-SVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFI 613

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            ++L AC  SG+V EG +YF+SM   Y+I+P ++HY+C+VDLLG++G L+EA++FI+ MP 
Sbjct: 614  SILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPM 673

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            KPD  +WGALL SCRIH H+E  E+A+  +F+ +  +   Y L+ NL A + +W+ V  +
Sbjct: 674  KPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEV 733

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R  M + G+      SW+++   VH F +    HP   EI   L     +MK+ G V   
Sbjct: 734  RKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAG-VEGP 792

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
               + DI E  K  +   H+E+LAIV+GL+ +    PI V KN  +C  CH   K++S  
Sbjct: 793  ESSHMDIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISRE 852

Query: 1049 RGREIFLRDGARFHHFREGECSCND 1073
              REI +RD  +FHHF+ G CSC D
Sbjct: 853  VRREISVRDAEQFHHFKGGICSCTD 877



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 245/582 (42%), Gaps = 80/582 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  ++ FG+   A   F     R+   W+  +  Y    G   E L+++  +   GV 
Sbjct: 146 ALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAK-AGLFDEALDLYHRMLWVGVK 204

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L+ C  +     G E+H  +I+ GF+ DV +  AL+  Y KC DV +A  +
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F ++ +  D + WN +I     N      ++LF  M          T+  ++ AC  +G 
Sbjct: 265 FDKMPN-RDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGD 323

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+QIHGYVL++    + S+ N LI MYS    +E A  VF   +  +L SW +MIS 
Sbjct: 324 DRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISG 383

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y                            NCL+         Q  L   + M++ G  P+
Sbjct: 384 YE---------------------------NCLMP--------QKALETYKMMEAEGIMPD 408

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             ++++VL A + L  L  G   H    + GL     V  SL+DMY K  C+  A E+F 
Sbjct: 409 EITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFH 468

Query: 592 NMKNRNIVAWNSLISGY-----CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS----- 641
           +   +NIV+W S+I G      CF+ LF   ++M+ ++     KP+ V+   ++S     
Sbjct: 469 STLEKNIVSWTSIILGLRINNRCFEALFF-FREMIRRL-----KPNSVTLVCVLSACARI 522

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPN-------------------------VVTWTSLIS 676
           G    G+   A  +   +   G  PN                         V +W  L++
Sbjct: 523 GALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDHEVTSWNILLT 582

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFI 735
           G  +      + + F +M + ++ PN  T  S+L  C   G++  G E  + +  K   +
Sbjct: 583 GYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIM 642

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKT-LASWNCMI 776
            +      ++D+  +SG L+ A E  +K   K   A W  ++
Sbjct: 643 PNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALL 684



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 131/571 (22%), Positives = 246/571 (43%), Gaps = 55/571 (9%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYF 254
           C L        L   +  H  +I+ G  + SD D+V +LI  Y++ GD  +A   F    
Sbjct: 212 CVLRTCGGMPNLVRGREIHVHVIRYG--FESDVDVVNALITMYVKCGDVNTARLVFDKMP 269

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
           +R    W++ +  Y    G   E L ++G +    V      +T ++  C  L    LG 
Sbjct: 270 NRDRISWNAMISGYFE-NGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGR 328

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H  +++  F  D  +  +L+  Y     +E A  +FS  ++  D + W  +I      
Sbjct: 329 QIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSR-TECRDLVSWTAMISGYENC 387

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              + A++ ++ M+         TI  +L AC+ +     G  +H    +  L S   V 
Sbjct: 388 LMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVA 447

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI MY++   ++ A  +F S  + N+ SW S+I           A   F +M   R++
Sbjct: 448 NSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLK 506

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           P+ +T  C+LS                                   A   +  L  G+E 
Sbjct: 507 PNSVTLVCVLS-----------------------------------ACARIGALTCGKEI 531

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H + LR G+ +D ++  +++DMYV+   ++ A + F ++ +  + +WN L++GY  +G  
Sbjct: 532 HAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKG 590

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTS 673
            +A ++  +M E  + P+ V++ S++   S  G   E L   + MK    I PN+  +  
Sbjct: 591 AHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYAC 650

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           ++    ++    E+ +F   +Q+  +KP+     +LL +C     + +  E+  L  +N 
Sbjct: 651 VVDLLGRSGKLEEAYEF---IQKMPMKPDPAVWGALLNSCR----IHHHVELGELAAENI 703

Query: 734 FIKDAYVATG----LIDMYSKSGNLKSAREV 760
           F +D   + G    L ++Y+ +G      EV
Sbjct: 704 F-QDDTTSVGYYILLSNLYADNGKWDKVAEV 733



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 179/414 (43%), Gaps = 49/414 (11%)

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
           G+    ++ L  M  L       +   +++     R  K G   + Y+  +     L +G
Sbjct: 85  GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            +L+ M+V+   L +A  VF  M+ RN+ +WN L+ GY   GLF  A  + ++M    +K
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204

Query: 631 PDLVSW-----------------------------------NSLVSGYSIWGQSKEALVI 655
           PD+ ++                                   N+L++ Y   G    A ++
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
              M N     + ++W ++ISG  +N    E L+ F  M +  + P+  TM+S++  C  
Sbjct: 265 FDKMPNR----DRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACEL 320

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
           LG  + G++IH   L+  F +D  +   LI MYS  G ++ A  VF ++  + L SW  M
Sbjct: 321 LGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAM 380

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS---- 831
           I G+      ++A+  +  +   G  PD IT   +L+AC     ++ G    +       
Sbjct: 381 ISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGL 440

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
             Y+I+      + ++D+  K   +D+A +   +   + +   W +++   RI+
Sbjct: 441 VSYSIVA-----NSLIDMYAKCKCIDKALEIFHST-LEKNIVSWTSIILGLRIN 488


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 240/676 (35%), Positives = 346/676 (51%), Gaps = 79/676 (11%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            +Q+C    +   GKQ+H  ++ S   S+  +CN L+SMYS+      A  V+  M+  N 
Sbjct: 51   IQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNY 110

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD--IITWNCLLSGHFTHGSYQNVLTLL 520
             S N +I+ Y   G +  A  +F++M      PD  + TWN +++G       +  L+L 
Sbjct: 111  MSSNILINGYVRAGDLVNARKVFDEM------PDRKLTTWNAMIAGLIQFEFNEEGLSLF 164

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
            R M  LGF P+  ++  V      LR +  G++ HGY ++ GL+ DL V +SL  MY++N
Sbjct: 165  REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 224

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
              LQ+ + V  +M  RN+VAWN+LI G        NA+                      
Sbjct: 225  GKLQDGEIVIRSMPVRNLVAWNTLIMG--------NAQN--------------------- 255

Query: 641  SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
                  G  +  L +   MK SG  PN +T+ +++S                        
Sbjct: 256  ------GCPETVLYLYKMMKISGCRPNKITFVTVLS------------------------ 285

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
                       +C  L +   G++IH   +K G      V + LI MYSK G L  A + 
Sbjct: 286  -----------SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKA 334

Query: 761  FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGL 819
            F +  ++    W+ MI  +  +G G EAI LF+ + E T  + + + F  LL AC +SGL
Sbjct: 335  FSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGL 394

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
             ++G + FD M   Y   P ++HY+C+VDLLG+AG LD+A   IR+MP K D  IW  LL
Sbjct: 395  KDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLL 454

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             +C IH + E A+   + + +++P +SA Y L+ N+ A + RW DV  +R SM +  VK 
Sbjct: 455  SACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKK 514

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
                SW +    VH F         + EIY  L  L  EMK  GY PDT  V  D+DEEE
Sbjct: 515  EAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEE 574

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K   L+ H+EKLA+ + LM     APIR+IKN RVCSDCH A KY+S+++ REI LRDG+
Sbjct: 575  KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGS 634

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF  G+CSC D W
Sbjct: 635  RFHHFINGKCSCGDYW 650



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 159/361 (44%), Gaps = 41/361 (11%)

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           N S  +  +Q+ T  + L  G++ H  ++ +G   D ++   LM MY K     +A  V+
Sbjct: 43  NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
             M+ +N ++ N LI+GY   G  VNA+K+ ++M + +    L +WN++++G   +  ++
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRK----LTTWNAMIAGLIQFEFNE 158

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           E L +   M   G  P+  T  S+ SGS                                
Sbjct: 159 EGLSLFREMHGLGFSPDEYTLGSVFSGS-------------------------------- 186

Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
               GL  +  G++IH   +K G   D  V + L  MY ++G L+    V R    + L 
Sbjct: 187 ---AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLV 243

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
           +WN +IMG A  G  +  + L+  +  +G +P+ ITF  +L++C +  +  +G +   + 
Sbjct: 244 AWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ-IHAE 302

Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
           +        +   S ++ +  K G L +A           D  +W +++ +   HG  + 
Sbjct: 303 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDE 361

Query: 891 A 891
           A
Sbjct: 362 A 362



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 180/448 (40%), Gaps = 82/448 (18%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ++ + +KL  F   V V+  + K+ +         L+N Y +  D+ +A K+F E+ D  
Sbjct: 85  LMSMYSKLGDFPSAVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPD-R 139

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
               WN +I   ++ E  E  + LFREM          T+  +    A + +   G+QIH
Sbjct: 140 KLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH 199

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           GY +K  LE +L V + L  MY RN KL+    V  SM   NL +WN++I      G  +
Sbjct: 200 GYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPE 259

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
               L+  M  S  +P+ IT+                                     VL
Sbjct: 260 TVLYLYKMMKISGCRPNKITF-----------------------------------VTVL 284

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            + ++L +   G++ H   ++ G    + V +SL+ MY K  CL +A + F   ++ + V
Sbjct: 285 SSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEV 344

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEE------------------------------- 628
            W+S+IS Y F G    A ++ N M E+                                
Sbjct: 345 MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDM 404

Query: 629 ------IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                  KP L  +  +V      G   +A  II  M    I  ++V W +L+S    ++
Sbjct: 405 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMP---IKTDIVIWKTLLSACNIHK 461

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           N   + + F ++ Q  I PN +    LL
Sbjct: 462 NAEMAQRVFKEILQ--IDPNDSACYVLL 487



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 204/472 (43%), Gaps = 57/472 (12%)

Query: 150 NTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSC--ISSGFCFLNETNKFRC- 206
           N R +  + R +   N+   +P   +     +L    QL C  + SGF     ++KF C 
Sbjct: 28  NLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGF----SSDKFICN 83

Query: 207 -LSSVKSK----HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYAD 260
            L S+ SK     + +   G++   + M  +++ + Y+  GD  +A K F     R    
Sbjct: 84  HLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTT 143

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +     F    +E L ++ E+HG G       L  +      L +  +G ++H   
Sbjct: 144 WNAMIAGLIQFEFN-EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 202

Query: 321 IKRGFDFDVHLKCALMNFY---GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
           IK G + D+ +  +L + Y   GK +D E    +      + + + WN +IM   +N   
Sbjct: 203 IKYGLELDLVVNSSLAHMYMRNGKLQDGE----IVIRSMPVRNLVAWNTLIMGNAQNGCP 258

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           E  + L++ M+ S  +    T V +L +C+ +    +G+QIH   +K    S ++V + L
Sbjct: 259 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 318

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQPD 496
           ISMYS+   L  A + F   +D +   W+SMIS+Y   G  D A  LFN M   + ++ +
Sbjct: 319 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 378

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            + +                L LL      G +  G            L L     E +G
Sbjct: 379 EVAF----------------LNLLYACSHSGLKDKG------------LELFDMMVEKYG 410

Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISG 607
           +  + GL +     T ++D+  +  CL  A+ +  +M  + +IV W +L+S 
Sbjct: 411 F--KPGLKH----YTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 37/250 (14%)

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
           +S + P  V   + I+      N RE+ + F    + +I  N++  +  +Q+C     L 
Sbjct: 6   SSVVRPLSVDPATAIATLCSKGNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLP 61

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSK------------------------------ 750
           +GK++HCL + +GF  D ++   L+ MYSK                              
Sbjct: 62  SGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYV 121

Query: 751 -SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            +G+L +AR+VF +  ++ L +WN MI G   +   +E + LF E+   GF PD  T  +
Sbjct: 122 RAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGS 181

Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           + +       V  G +     +  Y +   +   S +  +  + G L +    IR+MP +
Sbjct: 182 VFSGSAGLRSVSIGQQ-IHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR 240

Query: 870 PDATIWGALL 879
            +   W  L+
Sbjct: 241 -NLVAWNTLI 249


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
            thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g16835,
            mitochondrial; AltName: Full=Protein DYW10; Flags:
            Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
            thaliana]
          Length = 656

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/658 (34%), Positives = 358/658 (54%), Gaps = 55/658 (8%)

Query: 421  YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS-MISSYTGLGYVD 479
            Y+ K + +  +   N +I+   R+  ++ A RVF  M+  N  +WNS +I        + 
Sbjct: 51   YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A  LF+++     +PD  ++N +LS +  + +++   +    M    F+   S      
Sbjct: 111  EAHQLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP---FKDAAS------ 157

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
                                            +++  Y +   ++ A+E+F +M  +N V
Sbjct: 158  ------------------------------WNTMITGYARRGEMEKARELFYSMMEKNEV 187

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--DLVSWNSLVSGYSIWGQSKEALVIIH 657
            +WN++ISGY   G    A          ++ P   +V+W ++++GY    ++K+  +   
Sbjct: 188  SWNAMISGYIECGDLEKASHFF------KVAPVRGVVAWTAMITGYM---KAKKVELAEA 238

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
              K+  +  N+VTW ++ISG ++N    + LK F  M +E I+PNS+ +SS L  C  L 
Sbjct: 239  MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             LQ G++IH +  K+    D    T LI MY K G L  A ++F     K + +WN MI 
Sbjct: 299  ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            G+A +GN  +A+ LF E+++   +PD ITF A+L AC ++GLV  G  YF+SM  DY + 
Sbjct: 359  GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P  +HY+CMVDLLG+AG L+EA   IR+MPF+P A ++G LLG+CR+H ++E AE A+ +
Sbjct: 419  PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L +L   N+A Y  + N+ A  NRWEDV R+R  M E  V  V  +SWI+I   VH F +
Sbjct: 479  LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
                HP    I+ +L  L  +MK  GY P+      +++EE+K K+LL H+EKLA+ +G 
Sbjct: 539  SDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGC 598

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +K    + I+V KN R+C DCH A K++S +  REI +RD  RFHHF++G CSC D W
Sbjct: 599  IKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 46/312 (14%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A++  Y K + VE A  +F +++  ++ + WN +I   + N + E+ +KLFR M     +
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             S  +   L  C+++ A   G+QIH  V KS L ++++    LISMY +  +L  A ++
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL--------- 504
           F+ MK  ++ +WN+MIS Y   G  D A  LF +M  ++I+PD IT+  +L         
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLV 401

Query: 505 -------------------SGHFT--------HGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
                                H+T         G  +  L L+R   S+ FRP+ +    
Sbjct: 402 NIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIR---SMPFRPHAAVFGT 458

Query: 538 VLQAVTELRLLKYGRESHGYILR-NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
           +L A    + ++    +   +L+ N  +   YV   L ++Y   +  ++   V   MK  
Sbjct: 459 LLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV--QLANIYASKNRWEDVARVRKRMKES 516

Query: 597 NIVAWNSLISGY 608
           N+V     + GY
Sbjct: 517 NVVK----VPGY 524



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/506 (21%), Positives = 195/506 (38%), Gaps = 123/506 (24%)

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            ++ SD +     N+II   +R+   + A+++F  M+  +    +  ++ + +  +++  
Sbjct: 52  LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
            H+       +     E +    N ++S Y RN   E A   FD M   + +SWN+MI+ 
Sbjct: 112 AHQ-------LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITG 164

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y   G ++ A  LF  M    ++ + ++WN ++SG+   G  +      +          
Sbjct: 165 YARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFK---------- 210

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
                     V  +R                    +   T+++  Y+K   ++ A+ +F 
Sbjct: 211 ----------VAPVR-------------------GVVAWTAMITGYMKAKKVELAEAMFK 241

Query: 592 NMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------- 631
           +M  N+N+V WN++ISGY       +  K+   M EE I+P                   
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301

Query: 632 ----------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                           D+ +  SL+S Y   G+  +A  +   MK      +VV W ++I
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMI 357

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
           SG  Q+ N  ++L  F +M    I+P+  T  ++L  C   GL+  G     +      +
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG-----MAYFESMV 412

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           +D Y      D Y+                        CM+      G  +EA+ L   +
Sbjct: 413 RD-YKVEPQPDHYT------------------------CMVDLLGRAGKLEEALKLIRSM 447

Query: 796 LETGFQPDAITFTALLAACKNSGLVE 821
               F+P A  F  LL AC+    VE
Sbjct: 448 ---PFRPHAAVFGTLLGACRVHKNVE 470



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 5/214 (2%)

Query: 247 AKAFF--LYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
           A+A F  +  +++   W++ +  Y       ++ L+++  +  +G+   S  L+  L  C
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVE-NSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
           ++L A  LG ++H  + K     DV    +L++ Y KC ++  A KLF EV   +D + W
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF-EVMKKKDVVAW 353

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVL 423
           N +I    ++   + A+ LFREM  +  +    T V +L AC   G  + G       V 
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
              +E       C++ +  R  KLE A ++  SM
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 290/991 (29%), Positives = 483/991 (48%), Gaps = 121/991 (12%)

Query: 202  NKFRCLSSVKSKHAQMIKMGKIWNSDDM--VKSLIFHYLEFGDFTSAAKAFFLYFSRSYA 259
            N++R   +V+  H   +++ K   + D+    +L+  ++  G+  SA K F     ++  
Sbjct: 47   NRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLV 106

Query: 260  DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA--FWLGVEVH 317
             WS  +  Y    G   E   ++  +   G++     +   L+ C +L      LG+E+H
Sbjct: 107  SWSCLVSGYAQ-NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIH 165

Query: 318  ASLIKRGFDFDVHLKCALMNFYGKCR-DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
              + K  +  D+ L   LM+ Y  C   ++ A ++F E+  ++    WN II V  R   
Sbjct: 166  GLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIK-MKTSASWNSIISVYCRRGD 224

Query: 377  WENAIKLFREMQFSSAKAISR----TIVKMLQ-ACAKVG-AFHEGKQIHGYVLKSALESN 430
              +A KLF  MQ  + +   R    T   ++  AC+ V       +Q+   + KS+   +
Sbjct: 225  AISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKD 284

Query: 431  LSVCNCLISMYSR-------------------------------NNKLELATRVFDSMKD 459
            L V + L+S ++R                                ++ E A ++F  MKD
Sbjct: 285  LYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKD 344

Query: 460  H---NLSSWNSMISSYTGL--------------------GYVDVAWSLF----------- 485
                N SS+  ++S++T                        VDV W L            
Sbjct: 345  LVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDV-WILIGNALVNLYAKC 403

Query: 486  NKMNSSR----IQP--DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            N ++++R    + P  D ++WN ++SG   +  ++  +     M+  G  P+  SV   L
Sbjct: 404  NAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTL 463

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             +   L  +  G++ HG  ++ GLD D+ V  +L+ +Y + DC++  Q+VF  M   + V
Sbjct: 464  SSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQV 523

Query: 600  AWNSLISGYCF-KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEAL 653
            +WNS I      +   + A K   +M +   KP+ V++ +++S  S       G+   AL
Sbjct: 524  SWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHAL 583

Query: 654  VIIHHMKNSGIYPNV---------------------------VTWTSLISGSLQNENYRE 686
            ++ H + +     N                            V+W ++ISG + N    +
Sbjct: 584  ILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHK 643

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            ++     M Q+  + +  T++++L  C  +  L+ G E+H   ++     +  V + L+D
Sbjct: 644  AMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVD 703

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY+K G +  A   F     + + SWN MI G+A +G+G +A+ LF ++ + G  PD +T
Sbjct: 704  MYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVT 763

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F  +L+AC + GLV+EG+++F SM   Y + P IEH+SCMVDLLG+AG + +  +FI+TM
Sbjct: 764  FVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTM 823

Query: 867  PFKPDATIWGALLGS-CRIHG-HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            P  P+A IW  +LG+ CR +  + E    A++ L +LEP N+ NY L+ N+ A   +WED
Sbjct: 824  PMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWED 883

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            VE  R +M    VK     SW+ +   VHVF A    HP   +IY +L  ++++M+ LGY
Sbjct: 884  VEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGY 943

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            VP+T+    D++ E K ++L  H+EKLAI + L + +S  PIR+IKN RVC DCHTA KY
Sbjct: 944  VPETKYALYDLELENKEELLSYHSEKLAIAFVLTR-QSELPIRIIKNLRVCGDCHTAFKY 1002

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S +  R+I LRD  RFHHF  G CSC D W
Sbjct: 1003 ISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/785 (29%), Positives = 401/785 (51%), Gaps = 83/785 (10%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
            +V L   ++  YGKC  V SA   F  ++  ++D  W  ++    +N  +  A+ L++ M
Sbjct: 57   NVFLGNEIVRAYGKCGSVASARAAFDAIAR-KNDYSWGSMLTAYAQNGHYRAALDLYKRM 115

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNK 446
                   +  T+   L ACA + A  EGK IH  +  +  L+ ++ + N L++MY++   
Sbjct: 116  DLQPNPVVYTTV---LGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172

Query: 447  LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            LE A R                               LF +M+   +     +WN +++ 
Sbjct: 173  LEDAKR-------------------------------LFERMSGRSVS----SWNAMIAA 197

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            +   G ++  + L   M      P+  + + VL A + L LL  GR+ H  I   G + D
Sbjct: 198  YAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELD 254

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            L +  +L+ MY +  CL +A ++F  +  R++V+W+++I+ +    LF  A +  ++M+ 
Sbjct: 255  LSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQL 314

Query: 627  EEIKPD-----------------------------------LVSWNSLVSGYSIWGQSKE 651
            E ++P+                                   LV+  +LV  Y+ +G   E
Sbjct: 315  EGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDE 374

Query: 652  ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM-SSLL 710
            A  +   ++N     +   WT LI G  +  +    L+ + +M+     P +  + S ++
Sbjct: 375  ARSLFDQIENR----DEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVI 430

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              C  LG   + ++ H     +G I D  +AT L++MYS+ GNL+SAR+VF K +++   
Sbjct: 431  SACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTL 490

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +W  +I G+A +G    A+ L+ E+   G +P  +TF  +L AC ++GL E+G + F S+
Sbjct: 491  AWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI 550

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
             +DY + P I HYSC++DLL +AG L +A + I  MP +P+   W +LLG+ RIH  ++ 
Sbjct: 551  QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKR 610

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
            A  A+ ++ KL+P + A+Y L+ N+ A++     +  +R++M   GVK     SWI++  
Sbjct: 611  ATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVAD 670

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             +H F+     HP   EI+ EL  L  ++K+ GYVP++  V  D+ E+EK  +L  H+EK
Sbjct: 671  QIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEK 730

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LAI +GL+ T     +R+    R+C DCH+A K++S +  REI +RD +RFH FR+G+CS
Sbjct: 731  LAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCS 790

Query: 1071 CNDCW 1075
            C D W
Sbjct: 791  CGDYW 795



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 261/598 (43%), Gaps = 92/598 (15%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG--ELHGKGV 290
           ++  Y + G   SA  AF     ++   W S L  Y    G  +  L+++   +L    V
Sbjct: 64  IVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQ-NGHYRAALDLYKRMDLQPNPV 122

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLI-KRGFDFDVHLKCALMNFYGKCRDVESAN 349
           ++     T +L  C  + A   G  +H+ +   +G   DV L+ +L+  Y KC  +E A 
Sbjct: 123 VY-----TTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK 177

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           +LF  +S       WN +I    ++  +E AI+L+ +M    +    RT   +L AC+ +
Sbjct: 178 RLFERMSGRSVS-SWNAMIAAYAQSGHFEEAIRLYEDMDVEPS---VRTFTSVLSACSNL 233

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G   +G++IH  +     E +LS+ N L++MY+R   L+ A ++F  +   ++ SW++MI
Sbjct: 234 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 293

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           +++      D A   ++KM                                   Q  G R
Sbjct: 294 AAFAETDLFDEAIEFYSKM-----------------------------------QLEGVR 318

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           PN  + + VL A   +  L+ GR  H  IL NG    L  GT+L+D+Y     L  A+ +
Sbjct: 319 PNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSL 378

Query: 590 FDNMKNRNIVAWNSLISGYCFK------------------------------------GL 613
           FD ++NR+   W  LI GY  +                                    G 
Sbjct: 379 FDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGA 438

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
           F +A++  + +E + +  D V   SLV+ YS WG  + A  +   M +     + + WT+
Sbjct: 439 FADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSR----DTLAWTT 494

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           LI+G  ++  +  +L  + +M+ E  +P+  T   +L  C   GL + GK++  + +++ 
Sbjct: 495 LIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSD 553

Query: 734 FIKDAYVA--TGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEA 788
           +     +A  + +ID+ S++G L  A E+           +W+ ++    I+ + K A
Sbjct: 554 YAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRA 611



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/481 (22%), Positives = 222/481 (46%), Gaps = 45/481 (9%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G    A + F     RS + W++ +  Y    G  +E + ++ ++  +  +
Sbjct: 162 SLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQ-SGHFEEAIRLYEDMDVEPSV 220

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
              R  T +L  C+ L     G ++HA +  RG + D+ L+ AL+  Y +C+ ++ A K+
Sbjct: 221 ---RTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKI 277

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +    D + W+ +I      + ++ AI+ + +MQ    +    T   +L ACA VG 
Sbjct: 278 FQRLPR-RDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGD 336

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+ +H  +L +  +  L     L+ +Y+    L+ A  +FD +++ +   W  +I  
Sbjct: 337 LRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGG 396

Query: 472 YTGLGYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
           Y+  G+      L+ +M N++++    I ++C++S   + G++ +               
Sbjct: 397 YSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFAD--------------- 441

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
                                R++H  I  +G+  D  + TSL++MY +   L++A++VF
Sbjct: 442 --------------------ARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVF 481

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG-QS 649
           D M +R+ +AW +LI+GY   G    A  +  +ME E  +P  +++  ++   S  G Q 
Sbjct: 482 DKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQE 541

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           +   + I    +  ++PN+  ++ +I    +     ++ +    M    ++PN  T SSL
Sbjct: 542 QGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMP---VEPNDVTWSSL 598

Query: 710 L 710
           L
Sbjct: 599 L 599


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 240/752 (31%), Positives = 404/752 (53%), Gaps = 94/752 (12%)

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            + +Q+H  VLK    S  ++   L+S+YS  N L  + R+F+++      +W S+I  YT
Sbjct: 26   QAQQLHAQVLKFQASSLCNLSL-LLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYT 84

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS----------GHFTHG------------ 511
              G    +   F  M +S + PD   +  +L           G   HG            
Sbjct: 85   SHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLY 144

Query: 512  ---SYQNVLTLLRGMQSLGFRPNGSS---------------VSVVL----QAVTELRLLK 549
               +  N+ + LR ++  G +  G+S                SV++    + V+++    
Sbjct: 145  TGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFN 204

Query: 550  Y-----GRESHGYILRNGLDYD----------LYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            Y      RE    +L   +DY             +G  + D+   +  + + +++F+ M 
Sbjct: 205  YDVSCRSREFEAQVLE--IDYKPRSEYREMEACNLGQQIKDIS-HSMSVDSVRKIFEMMP 261

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV----------SGYS 644
             +++V+WN++I+G    GL+     M+ +M    +KPD  + +S++           G  
Sbjct: 262  EKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKE 321

Query: 645  IWGQS-KEAL---------VIIHHMKNSGIYPNV-----------VTWTSLISGSLQNEN 683
            I G S ++ L         +I  + K + +  +            ++W S+I+G +QN  
Sbjct: 322  IHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGL 381

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
            + E LKFF QM    IKP S + SS++  C  L  L  GK++H    +NGF ++ ++A+ 
Sbjct: 382  FDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS 441

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            L+DMY+K GN+++AR++F +   + + SW  MIMG A++G+  +AI LF ++   G +P+
Sbjct: 442  LVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPN 501

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             + F A+L AC ++GLV+E WKYF+SM+ D+ I P +EHY+ + DLLG+AG L+EA+DFI
Sbjct: 502  YVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI 561

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              MP  P  ++W  LL +CR+H +++ AE  + R+ +++P N+  Y L+ N+ + + RW+
Sbjct: 562  CGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWK 621

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            +  + R S+   G++     SWI++   V+ F A    HP   +I   +  L+  M+K G
Sbjct: 622  EAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEG 681

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            YVPDT  V+ D++EE+K  ++ SH+E+LAIV+G++ T +   IRV KN RVC+DCHTA K
Sbjct: 682  YVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATK 741

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++S + GREI +RD +RFHHF+ G CSC D W
Sbjct: 742  FISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 144/632 (22%), Positives = 263/632 (41%), Gaps = 98/632 (15%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF-FLYFSRSYADWSSFLE 266
           S  +  HAQ++K       +  +   I+ ++       + + F  L+F  + A W S + 
Sbjct: 25  SQAQQLHAQVLKFQASSLCNLSLLLSIYSHINL--LHDSLRLFNTLHFPPALA-WKSVIR 81

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y S G   + L    G L   G+     +   +LK C  LM   LG  +H  +I+ G D
Sbjct: 82  CYTSHGLPHKSLGSFIGML-ASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLD 140

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
           FD++   ALMN Y K R ++ + +     S + D++            E+          
Sbjct: 141 FDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEM-----------TER---------- 179

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN-- 444
                    +R++       A V   ++G+++          S++   N  +S  SR   
Sbjct: 180 ---------TRSV-----RTASVLVGNQGRKV----------SDIEAFNYDVSCRSREFE 215

Query: 445 -NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              LE+  +     ++    +    I   +    VD    +F  M     + D+++WN +
Sbjct: 216 AQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMP----EKDLVSWNTI 271

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           ++G+  +G Y   LT++R M     +P+  ++S VL  + E   +  G+E HG  +R GL
Sbjct: 272 IAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGL 331

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           D ++YV +SL+DMY K   + ++  VF  +  R+ ++WNS+I+G    GLF    K   Q
Sbjct: 332 DAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQ 391

Query: 624 MEEEEIKPDLVSW-----------------------------------NSLVSGYSIWGQ 648
           M   +IKP   S+                                   +SLV  Y+  G 
Sbjct: 392 MLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGN 451

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            + A  I   M+      ++V+WT++I G   + +  ++++ F QM+ E I+PN     +
Sbjct: 452 IRTARQIFDRMR----LRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMA 507

Query: 709 LLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSAN 766
           +L  C   GL+    K  + + L  G          + D+  ++G L+ A + +      
Sbjct: 508 VLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIG 567

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            T + W  ++    ++ N   A  + + +LE 
Sbjct: 568 PTGSVWATLLSACRVHKNVDMAEKVANRILEV 599


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/504 (40%), Positives = 302/504 (59%), Gaps = 8/504 (1%)

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            +++  + +N  +  A+++F  M  +N+V WN++ISGY   G   +A K+  +   + +  
Sbjct: 74   TMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSV-- 131

Query: 632  DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
              V+W ++++GY   G+   A  +   M       N+VTW ++I+G ++N    + +K F
Sbjct: 132  --VAWTAMITGYMKLGRIGLAERLFEKMPEK----NLVTWNAMIAGYIENHRAEDGVKLF 185

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
              M    I+PNS+T+SS L  C  L  LQ G+++H L  K+    D    T LI MY K 
Sbjct: 186  RTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKC 245

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G L+   ++F +   + + +WN MI G+A +G GK+A+ LF E++E G +PD ITF A+L
Sbjct: 246  GVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVL 305

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             AC ++G  + G KYF SM+ DY ++   +HY+CMVDLLG+AG L EA D I  MPFKP 
Sbjct: 306  MACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPH 365

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A ++G LLG+CRIH + E AE AS++L  L+P ++  Y  + N+ A + RW+ V R+R S
Sbjct: 366  AAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKS 425

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M    V     +SWI++  + H F +    HP    I+ +L  L  +MK  GYVPD    
Sbjct: 426  MKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFA 485

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+ EE+K ++LL H+EKLAI YGL+K     PIRV KN RVC DCH A KY+S +  R
Sbjct: 486  LHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERR 545

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD  RFHHF++G CSC D W
Sbjct: 546  EIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 179/372 (48%), Gaps = 21/372 (5%)

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           ++ A +LF ++ +  D + +N ++   +RN   E A   F +M      + +  I     
Sbjct: 23  LKEAQELFVKIPE-PDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMIT---- 77

Query: 405 ACAKVGAFHEGKQIHGY--VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
                  F + +Q+     +       N+   N +IS Y     L+ A ++F+     ++
Sbjct: 78  ------GFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSV 131

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            +W +MI+ Y  LG + +A  LF KM     + +++TWN +++G+  +   ++ + L R 
Sbjct: 132 VAWTAMITGYMKLGRIGLAERLFEKMP----EKNLVTWNAMIAGYIENHRAEDGVKLFRT 187

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M   G +PN S++S  L   +EL  L+ GR+ H  + ++ L  D   GTSL+ MY K   
Sbjct: 188 MVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGV 247

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           L++  ++F  +  R++V WN++ISGY   G    A  + ++M E+ +KPD +++ +++  
Sbjct: 248 LEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMA 307

Query: 643 YSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            +  G +   +   H M K+ G+      +T ++    +     E++    +M     KP
Sbjct: 308 CNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMP---FKP 364

Query: 702 NSTTMSSLLQTC 713
           ++    +LL  C
Sbjct: 365 HAAVFGTLLGAC 376



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 100/257 (38%), Gaps = 32/257 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELLEVWGE----- 284
           ++I  Y+E GD  SA K F     +S   W++ +  Y   G  G  + L E   E     
Sbjct: 105 AMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVT 164

Query: 285 -----------------------LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
                                  + G G+   S  L+  L  C++L A  LG +VH  + 
Sbjct: 165 WNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVC 224

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           K     D     +L++ Y KC  +E   KLF +V    D + WN +I    ++ + + A+
Sbjct: 225 KSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPR-RDVVTWNAMISGYAQHGEGKKAL 283

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISM 440
            LF EM     K    T V +L AC   G    G K  H       L +      C++ +
Sbjct: 284 GLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDL 343

Query: 441 YSRNNKLELATRVFDSM 457
             R  KL  A  + + M
Sbjct: 344 LGRAGKLVEAVDLIEKM 360



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 52/283 (18%), Positives = 104/283 (36%), Gaps = 73/283 (25%)

Query: 667 NVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             VTW S+++G S +    +E+ + F+++ + D    +T +S  ++         +  E 
Sbjct: 5   TTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVR--------NSNMER 56

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
                ++  IKD      +I  ++++  +  AR++F     K + +WN MI G+   G+ 
Sbjct: 57  AQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDL 116

Query: 786 KEAILLFHE---------------------------LLETGFQPDAITFTALLAACKNSG 818
             A+ LF +                           L E   + + +T+ A++A    + 
Sbjct: 117 DSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENH 176

Query: 819 LVEEGWKYFDSMSTDYNIIPT----------------------IEHYSC----------- 845
             E+G K F +M   + I P                       +    C           
Sbjct: 177 RAEDGVKLFRTM-VGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAG 235

Query: 846 --MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
             ++ +  K G L++ W     +P + D   W A++     HG
Sbjct: 236 TSLISMYCKCGVLEDGWKLFVQVP-RRDVVTWNAMISGYAQHG 277


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/820 (29%), Positives = 407/820 (49%), Gaps = 83/820 (10%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
            +L+ C +  A   G ++H+  +K      ++ L   +++ Y  C     A   F  + + 
Sbjct: 49   LLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDAL-EQ 107

Query: 359  EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
             +   W  ++     + + +  ++    M+    +  + T +  L +C    +  +G +I
Sbjct: 108  RNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRI 167

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            H  V+ S LE +  V N L++MY +   L  A RV                         
Sbjct: 168  HQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRV------------------------- 202

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                  F KM  +R   ++I+W+ +   H  HG+    L   R M  LG +   S++  +
Sbjct: 203  ------FAKMERTR---NVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTI 253

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN--R 596
            L A +   L++ GR  H  I  +G + +L V  ++M MY +   ++ A++VFD M    R
Sbjct: 254  LSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALR 313

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQME------------------------------- 625
            ++V+WN ++S Y       +A ++  +M+                               
Sbjct: 314  DVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQI 373

Query: 626  -EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
              +E++ +++  N+LVS Y+  G   EA  +   M+   I    ++WT++IS  ++    
Sbjct: 374  VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSI----ISWTTIISAYVRRRLV 429

Query: 685  RESLKFFIQMQQ-------EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             E+   F QM +       + +KP++    ++L  C  +  L+ GK +       G   D
Sbjct: 430  AEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSD 489

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKT-LASWNCMIMGFAIYGNGKEAILLFHELL 796
              V T ++++Y K G ++  R +F    ++  +  WN MI  +A +G   EA+ LF  + 
Sbjct: 490  KAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRME 549

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY-NIIPTIEHYSCMVDLLGKAGY 855
              G +PD+ +F ++L AC ++GL ++G  YF SM+T+Y N+  TI+H+ C+ DLLG+ G 
Sbjct: 550  MEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGR 609

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L EA +F+  +P KPDA  W +LL +CR H  L+ A+  + +L +LEP  +  Y  + N+
Sbjct: 610  LKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNI 669

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A   +W  V ++R  M E GVK     S I+I + +H F+     HP   EI  EL  L
Sbjct: 670  YAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKL 729

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
             S+MK+ GYVPDT+ V   +DE+EK ++L SH+E+LAI  GL+ T    P+RV KN RVC
Sbjct: 730  HSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVC 789

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            SDCHTA K +S + GR+I +RD  RFH F++G+CSC D W
Sbjct: 790  SDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/539 (22%), Positives = 233/539 (43%), Gaps = 85/539 (15%)

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRN 444
           +++  + +A + T  ++LQ CA+  A  EG++IH   +K + L  NL + N ++SMY+  
Sbjct: 33  DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           +    A   FD+++  NL SW  +++++   G          +M    ++PD +T+    
Sbjct: 93  DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF---- 148

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
                             + +LG   +  S             L+ G   H  ++ + L+
Sbjct: 149 ------------------ITALGSCGDPES-------------LRDGIRIHQMVVDSRLE 177

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKG----------- 612
            D  V  +L++MY K   L +A+ VF  M + RN+++W+ +   +   G           
Sbjct: 178 IDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRF 237

Query: 613 ---LFVNAKK-----MLNQMEEEEIKPD----------------LVSWNSLVSGYSIWGQ 648
              L + A K     +L+      +  D                L+  N++++ Y   G 
Sbjct: 238 MLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGA 297

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            +EA  +   M  +    +VV+W  ++S  + N+  +++++ + +MQ   ++ +  T  S
Sbjct: 298 VEEARKVFDAMDEA--LRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVS 352

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           LL  C     +  G+ +H   + +   K+  V   L+ MY+K G+   AR VF K   ++
Sbjct: 353 LLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRS 412

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLE-------TGFQPDAITFTALLAACKNSGLVE 821
           + SW  +I  +       EA  LF ++LE          +PDA+ F  +L AC +   +E
Sbjct: 413 IISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALE 472

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           +G K     +    +       + +V+L GK G ++E       +  +PD  +W A++ 
Sbjct: 473 QG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA 530



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 234/518 (45%), Gaps = 46/518 (8%)

Query: 216 QMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF-LYFSRSYADWSSFLEDYESFGGE 274
           QM+   ++     +  +L+  Y + G  + A + F  +  +R+   WS  +    +  G 
Sbjct: 169 QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS-IMAGAHALHGN 227

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
           V E L  +  +   G+      +  IL  C+       G  +H+ +   GF+ ++ +  A
Sbjct: 228 VWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANA 287

Query: 335 LMNFYGKCRDVESANKLFSEVSD-LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +M  YG+C  VE A K+F  + + L D + WN ++   + N++ ++AI+L++ MQ  + K
Sbjct: 288 VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRADK 347

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T V +L AC+       G+ +H  ++   LE N+ V N L+SMY++      A  V
Sbjct: 348 V---TYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAV 404

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           FD M+  ++ SW ++IS+Y     V  A  LF +M                         
Sbjct: 405 FDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM------------------------- 439

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              L L +   S   +P+  +   +L A  ++  L+ G+         GL  D  VGT++
Sbjct: 440 ---LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAV 496

Query: 574 MDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           +++Y K   ++  + +FD + +R ++  WN++I+ Y   G    A K+  +ME E ++PD
Sbjct: 497 VNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPD 556

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL-----QNENYRES 687
             S+ S++   S  G   +       M     Y N VT T    G +     +    +E+
Sbjct: 557 SFSFVSILLACSHTGLEDQGKSYFTSMTTE--YRN-VTRTIQHFGCVADLLGRGGRLKEA 613

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            +F   +++  +KP++   +SLL  C     L+  KE+
Sbjct: 614 EEF---LEKLPVKPDAVAWTSLLAACRNHRDLKRAKEV 648



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 2/198 (1%)

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK-DAYVATGLIDMYSK 750
           + ++++ ++  + T + LLQ C     L  G++IH L +K+  +  +  +   ++ MY+ 
Sbjct: 32  LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAH 91

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             +   A+  F     + L SW  ++  FAI G  KE +     + + G +PDA+TF   
Sbjct: 92  CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITA 151

Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
           L +C +   + +G +    M  D  +    +  + ++++  K G L  A      M    
Sbjct: 152 LGSCGDPESLRDGIR-IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTR 210

Query: 871 DATIWGALLGSCRIHGHL 888
           +   W  + G+  +HG++
Sbjct: 211 NVISWSIMAGAHALHGNV 228


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 245/813 (30%), Positives = 405/813 (49%), Gaps = 96/813 (11%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            +MN Y K   +  A +LF  +    D   WN ++    ++ ++ +A++ F  M+ S    
Sbjct: 101  MMNGYAKLGSLSDAEELFGRMPR-RDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSL 159

Query: 395  ISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             +  T    +++C  +G      Q+ G + K   + +  V   ++ M+ R   ++ A++ 
Sbjct: 160  PNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQ 219

Query: 454  FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            F  ++   +   NSM++ Y     VD A  LF  M     + D+++WN ++S     G  
Sbjct: 220  FSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMP----ERDVVSWNMMVSALSQSGRA 275

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            +  L++   M + G R + ++ +  L A  +L  L +G++ H  ++R+    D YV +++
Sbjct: 276  REALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAM 335

Query: 574  MDMY-------------------------------VKNDCLQNAQEVFDNMK-------- 594
            +++Y                               ++  C   + E+F+ M+        
Sbjct: 336  VELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQ 395

Query: 595  -------------------------------NRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
                                            R +V  NSLIS Y   G   NA+ + + 
Sbjct: 396  FALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSS 455

Query: 624  MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            MEE     D+VSW  +++ YS  G   +A      M       NV+TW +++   +Q+  
Sbjct: 456  MEER----DIVSWTGMLTAYSQVGNIGKAREFFDGMSTR----NVITWNAMLGAYIQHGA 507

Query: 684  YRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              + LK +  M  E D+ P+  T  +L + C  +G  + G +I    +K G I D  V  
Sbjct: 508  EEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMN 567

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             +I MYSK G +  AR++F   + K L SWN MI G++ +G GK+AI +F ++L+ G +P
Sbjct: 568  AVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKP 627

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D I++ A+L++C +SGLV+EG  YFD +  D+N+ P +EH+SCMVDLL +AG L EA + 
Sbjct: 628  DYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNL 687

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MP KP A +WGALL +C+ HG+ E AE+A++ LF L+  +S  Y L+  + A + + 
Sbjct: 688  IDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKS 747

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
             D  ++R  M + G+K    +SW+++   VHVF AE   HP    I  +L  L+ ++ +L
Sbjct: 748  VDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQL 807

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYV             E  +  + H+EKLA+ +G+M   +  PI ++KN R+C DCHT  
Sbjct: 808  GYV-----------RTESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVI 856

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K +S V GRE  +RD  RFHHF+ G CSC D W
Sbjct: 857  KLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 138/652 (21%), Positives = 274/652 (42%), Gaps = 81/652 (12%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG-VIFRSR 295
           Y + G  + A + F     R    W++ +  Y    G   + +E +  +   G  +  + 
Sbjct: 105 YAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQ-SGRFLDAMESFVSMRRSGDSLPNAF 163

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
                +K C  L    + +++   L K GF  D  +   +++ + +C  V+ A+K FS++
Sbjct: 164 TFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQI 223

Query: 356 -----------------------------SDLEDDLL-WNEIIMVKLRNEKWENAIKLFR 385
                                        S  E D++ WN ++    ++ +   A+ +  
Sbjct: 224 ERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAV 283

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           +M     +  S T    L ACAK+ +   GKQ+H  V++S    +  V + ++ +Y++  
Sbjct: 284 DMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCG 343

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
             + A RVF S++D N  SW  +I  +   G    +  LFN+M +  +  D      ++S
Sbjct: 344 CFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIIS 403

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
           G     S +  + L R + SL  +   +   V+  ++  +       ++   I  +  + 
Sbjct: 404 G----CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEER 459

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM- 624
           D+   T ++  Y +   +  A+E FD M  RN++ WN+++  Y   G   +  KM + M 
Sbjct: 460 DIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAML 519

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY------------------- 665
            E+++ PD V++ +L  G +  G +K    I  H    G+                    
Sbjct: 520 TEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRI 579

Query: 666 ------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                        ++V+W ++I+G  Q+   +++++ F  M ++  KP+  +  ++L +C
Sbjct: 580 SEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSC 639

Query: 714 GGLGLLQNGKEIHCLCLKNGFIKDAYVATGL------IDMYSKSGNLKSAREVFRKSANK 767
              GL+Q GK  +   LK    +D  V+ GL      +D+ +++GNL  A+ +  +   K
Sbjct: 640 SHSGLVQEGK-FYFDMLK----RDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMK 694

Query: 768 TLAS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             A  W  ++     +GN + A L    L +    PD+  +  L     ++G
Sbjct: 695 PTAEVWGALLSACKTHGNNELAELAAKHLFDLD-SPDSGGYMLLAKIYADAG 745



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 192/428 (44%), Gaps = 45/428 (10%)

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           S  A+++ +   L++C   GA    + +HG ++   L S + + N L+  Y     L  A
Sbjct: 23  SHMAVTQALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDA 82

Query: 451 TRVF-DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
             +    + + N+ + N M++ Y  LG +  A  LF +M     + D+ +WN L+SG++ 
Sbjct: 83  RGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMP----RRDVTSWNTLMSGYYQ 138

Query: 510 HGSYQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            G + + +     M+  G   PN  +    +++   L   +   +  G + + G   D  
Sbjct: 139 SGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPD 198

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           V T ++DM+V+   +  A + F  ++   +   NS+++GY       +A ++   M E  
Sbjct: 199 VATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPER- 257

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
              D+VSWN +VS  S  G+++EAL +   M N G                         
Sbjct: 258 ---DVVSWNMMVSALSQSGRAREALSVAVDMHNRG------------------------- 289

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
                     ++ +STT +S L  C  L  L  GK++H   +++    D YVA+ ++++Y
Sbjct: 290 ----------VRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELY 339

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
           +K G  K AR VF    ++   SW  +I GF  YG   E++ LF+++       D     
Sbjct: 340 AKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALA 399

Query: 809 ALLAACKN 816
            +++ C N
Sbjct: 400 TIISGCSN 407



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 153/341 (44%), Gaps = 37/341 (10%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSR 256
           L    K   L   K  HAQ+I+   +   D  V S +   Y + G F  A + F     R
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIR--SLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR 358

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +   W+  +  +  +G    E LE++ ++  + +      L  I+  C+  M   L  ++
Sbjct: 359 NTVSWTVLIGGFLQYGC-FSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQL 417

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE----------------- 359
           H+  +K G    V +  +L++ Y KC ++++A  +FS + + +                 
Sbjct: 418 HSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNI 477

Query: 360 -------------DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR--TIVKMLQ 404
                        + + WN ++   +++   E+ +K++  M  +    I    T V + +
Sbjct: 478 GKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAM-LTEKDVIPDWVTYVTLFR 536

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
            CA +GA   G QI G+ +K  L  + SV N +I+MYS+  ++  A ++FD +   +L S
Sbjct: 537 GCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVS 596

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
           WN+MI+ Y+  G    A  +F+ M     +PD I++  +LS
Sbjct: 597 WNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLS 637


>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
 gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 251/814 (30%), Positives = 405/814 (49%), Gaps = 78/814 (9%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           +C    K  HA  IK G  +++D  + + L+  Y   G    A   F     R+   W +
Sbjct: 73  KCPKLGKQVHAHTIKTG--FDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKA 130

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            L  Y   G   +E   ++  L   GV     +  ++ K C+ L +  LG ++H  +IK 
Sbjct: 131 ILSVYLDHG-LFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKF 189

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN--------- 374
            F  ++++  AL++ YGKC  ++ A K+  ++ +  D + WN +I     N         
Sbjct: 190 RFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPE-RDSVTWNSVITACAANGMVYEALEF 248

Query: 375 -EK-------------W-------------ENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            EK             W             E AI++   MQ       ++T+  +L ACA
Sbjct: 249 LEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACA 308

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
           ++     GKQ+HGY+ +    SN  V N L+ +Y R   +  A ++F      N+ S N+
Sbjct: 309 RLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNT 368

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSL 526
           MI  Y   G V  A  LF+ M+   I+  +I+WN ++SG+  +  +    ++ + M    
Sbjct: 369 MIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEE 428

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
           G  P+  ++  VL A  +   L+ G+E H   +  GL  D +VG +L++MY K   L  A
Sbjct: 429 GIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAA 488

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           Q  FD                                   E ++ D+ +WN+L+SGY+  
Sbjct: 489 QVAFD-----------------------------------EVMEKDVPTWNALISGYTRS 513

Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
            Q +    ++  MK  G +PN+ TW S+++G ++N     +++ F +MQ   ++P+  T+
Sbjct: 514 NQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTV 573

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
             +L  C  L  L+ GK+ H   +K G+  D ++   L+DMY+K G+LK A+  + + +N
Sbjct: 574 GIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISN 633

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
             L S N M+   A++G+G+E I LF  +L  GF PD +TF ++L++C + G VE G ++
Sbjct: 634 PNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEF 693

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           FD M   YN+ PT++HY+ MVDLL ++G L EA++ I+ MP + D+ +WGALLG C  HG
Sbjct: 694 FDLMGY-YNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHG 752

Query: 887 HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
           ++E  EIA+ RL +LEP NS NY L+ NL A + RW D+ R+R  M + G+      SWI
Sbjct: 753 NIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKSPGCSWI 812

Query: 947 QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
           +    +H F A    H    EIY  L +L   MK
Sbjct: 813 EDKNEIHSFLACDRSHKRAEEIYATLDYLALHMK 846


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  408 bits (1048), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 258/813 (31%), Positives = 410/813 (50%), Gaps = 79/813 (9%)

Query: 214 HAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYA----DWSSFLED 267
           HA+ +  G + N + +     L+  Y+    F  A  A F    R+ A     W+  +  
Sbjct: 55  HARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAV-AVFSALPRAAAGSSLPWNWLIRG 113

Query: 268 YESFGGEVQELL---EVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           + + G     +L   ++W   H       +  L  ++K C  L A  LG  VH +    G
Sbjct: 114 FTAAGHHSLAVLFYVKMW--THPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATG 171

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
              DV++  AL+  Y     +  A   F  +    D +LWN ++   ++      A++LF
Sbjct: 172 LASDVYVGSALIKMYSDAGLLRDARDAFDGMP-WRDCVLWNVMMDGYIKAGDVGGAVRLF 230

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           R M+ S  +    T+   L  CA       G Q+H   +K  LE  ++V N L+SMY++ 
Sbjct: 231 RNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKC 290

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             L                               D AW LF  +     + D++TWN ++
Sbjct: 291 RCL-------------------------------DDAWRLFELLP----RDDLVTWNGMI 315

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           SG   +G     L L   M   G RP+  ++  +L A+T+L  LK G+E HGYI+RN + 
Sbjct: 316 SGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVH 375

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            D ++ ++L+D+Y K   ++ A+ ++D  +  ++V  +++ISGY   G+   A +M   +
Sbjct: 376 MDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYL 435

Query: 625 EEEEIKPDLVSWNSLVS----------GYSIWGQS-----------KEALV--------- 654
            E+ IKP+ V+  S++           G  I G             + AL+         
Sbjct: 436 LEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRL 495

Query: 655 -IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            + H++ +     + VTW S+IS   QN   +E+L  F QM  E IK N+ T+SS L  C
Sbjct: 496 DLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSAC 555

Query: 714 GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
             L  +  GKEIH + +K     D +  + LIDMY+K GN++ A  VF    +K   SWN
Sbjct: 556 ASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWN 615

Query: 774 CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
            +I  +  +G  KE++   H + E G++PD +TF AL++AC ++GLVEEG + F  M+ +
Sbjct: 616 SIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKE 675

Query: 834 YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
           Y I P +EH++CMVDL  ++G LD+A  FI  MPFKPDA IWGALL +CR+H ++E A+I
Sbjct: 676 YLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADI 735

Query: 894 ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
           AS+ LFKL+P NS  Y LM N+ A++ RW+ V ++R  M +  +  +  +SW+ ++   H
Sbjct: 736 ASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSH 795

Query: 954 VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
           +F A    HP + +IY  L  L+ E+++ GYVP
Sbjct: 796 LFVASDKSHPESEDIYTSLKALLQELREEGYVP 828



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 160/628 (25%), Positives = 271/628 (43%), Gaps = 75/628 (11%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFD---VHLKCALMNFYGKCRDVESANKLFS 353
           L  +L+ C       LG+++HA  +  G   +   + L   L+  Y   R    A  +FS
Sbjct: 35  LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 354 EV--SDLEDDLLWNEIIMVKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKV 409
            +  +     L WN +I           A+  + +M    ++    + T+  ++++CA +
Sbjct: 95  ALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           GA   G+ +H     + L S++ V + LI MYS    L  A   FD M   +   WN M+
Sbjct: 155 GAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMM 214

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
             Y   G V  A  LF  M  S  +P+  T  C LS                        
Sbjct: 215 DGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLS------------------------ 250

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                         E  LL  G + H   ++ GL+ ++ V  +L+ MY K  CL +A  +
Sbjct: 251 ----------VCAAEADLLS-GVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRL 299

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG-- 647
           F+ +   ++V WN +ISG    GL   A  +   M     +PD V+  SL+   +     
Sbjct: 300 FELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGL 359

Query: 648 -QSKE------------------ALVIIH----------HMKNSGIYPNVVTWTSLISGS 678
            Q KE                  ALV I+          ++ ++    +VV  +++ISG 
Sbjct: 360 KQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGY 419

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
           + N    ++L+ F  + ++ IKPN+ T++S+L  C  +  L  G+EIH   L+N +    
Sbjct: 420 VLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKC 479

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
           YV + L+DMY+K G L  +  +F K + K   +WN MI  F+  G  +EA+ LF ++   
Sbjct: 480 YVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCME 539

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
           G + + +T ++ L+AC +   +  G K    +     I   I   S ++D+  K G ++ 
Sbjct: 540 GIKYNNVTISSALSACASLPAIYYG-KEIHGVIIKGPIKADIFAESALIDMYAKCGNMEL 598

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHG 886
           A      MP K + + W +++ +   HG
Sbjct: 599 ALRVFEFMPDKNEVS-WNSIISAYGAHG 625


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  408 bits (1048), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/714 (33%), Positives = 364/714 (50%), Gaps = 28/714 (3%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN II   ++N   E+A+ +F  M +        TI  +L AC  + A   GK IH    
Sbjct: 322  WNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAX 381

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            K  +  N+ V   +I MYS+    + A +VF   ++ N + WN MI++Y   G V+ A  
Sbjct: 382  KHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALG 441

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            L   M     +PD+IT+N +LSGH  +G       LL  M  +G +PN  S +V++    
Sbjct: 442  LLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQ 501

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            +                +GL Y+      +M     + C  N  EV +     N +    
Sbjct: 502  Q----------------SGLSYEALKVFRIMQ-SPSDGC--NPNEVLNLSMRPNPITITG 542

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
             +       L+   K++         +P++   ++LV  Y+       A  +   +    
Sbjct: 543  ALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGR- 601

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               N V+W +L++G + N+   E+LK F++M  E ++P+S T   L   CG +  ++ G+
Sbjct: 602  ---NTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGR 658

Query: 724  EIHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
             +H    K     +K+A + + LIDMY+K G++  A+ VF     K +  WN MI  F++
Sbjct: 659  GLHGYAAKCQLDELKNA-IXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSV 717

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G  + A  +F ++   G  PD ITF +LL+AC   GLVEEGWKYF+SM   Y +  T+E
Sbjct: 718  HGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLE 777

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+CMV +LG AG LDEA DFIR MP+ PDA +W  LL +CR+H + E  E A++ LF+L
Sbjct: 778  HYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFEL 837

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            EP N+ NY L+ N+   S  W+  + LR  M    + ++   S++ +      F    + 
Sbjct: 838  EPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESS 897

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
            HP   EI      L  +M+  GY P    V+ D +E+E       HTEKLAI +G++ + 
Sbjct: 898  HPELEEILETWDXLARKMELSGYFP-LDPVFDD-EEKELDPFSCLHTEKLAICFGIISSN 955

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               P+ V KN R+C DCHT+AK +S + GREIF++D   +HH ++G C C D W
Sbjct: 956  XYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGICXCQDRW 1009



 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 179/641 (27%), Positives = 310/641 (48%), Gaps = 64/641 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIK-RGFDFDVHLKCALMNFYGKCR-DVESANKLFSEVSD 357
           +L  C+ L  F    ++HA ++K     +   +   L+  Y K +  +E A KL  E+ +
Sbjct: 89  LLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPN 145

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
                 +  +I    R+E+W+     FR M +         +  +L+AC+ +     GK 
Sbjct: 146 -RTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKM 204

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +HG+V++ ++ES++ V N LI  YS    L  +  VF SM++ ++ SW ++IS+Y   G 
Sbjct: 205 VHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGL 264

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR-------- 529
            D A  +F+ M    ++PD+I+W+ LLSG   +G     L  L  M   G +        
Sbjct: 265 XDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNG 324

Query: 530 ---------------------------PNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
                                      PN  +++ +L A T L+ L+ G+  H    ++G
Sbjct: 325 IISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHG 384

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           +  ++YV  S++DMY K      A++VF   +N+N   WN +I+ Y  +G   +A  +L 
Sbjct: 385 IVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLR 444

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
            M+++  KPD++++N+++SG++  G   +A  ++  M   G+ PNVV++  LISG  Q+ 
Sbjct: 445 SMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSG 504

Query: 683 NYRESLKFFIQMQQE------------DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
              E+LK F  MQ               ++PN  T++  L  C  L L   GKEIH   L
Sbjct: 505 LSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTL 564

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
           +NGF  + +V++ L+DMY+K  ++ SA +VF +   +   SWN ++ G+      +EA+ 
Sbjct: 565 RNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALK 624

Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVE-----EGWKYFDSMSTDYNIIPTIEHYSC 845
           LF E+L  G QP +ITF  L  AC +   +       G+     +    N I      S 
Sbjct: 625 LFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAI-----XSA 679

Query: 846 MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           ++D+  K G + +A     +   + D  +W A++ +  +HG
Sbjct: 680 LIDMYAKCGSILDAKSVFDS-EVEKDVPLWNAMISAFSVHG 719



 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 244/485 (50%), Gaps = 42/485 (8%)

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNN-KL 447
           SS   IS +I  +L  C+ +  F   +QIH  V+K +AL+   S+ N L+ +Y +N   L
Sbjct: 78  SSPTEISDSI-SLLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSL 133

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
           E A ++ D + +  + ++ ++I SY      D  +S F                      
Sbjct: 134 EDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXF---------------------- 171

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                        R M   G  P+   V  +L+A + + L + G+  HG+++R  ++ D+
Sbjct: 172 -------------RLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDV 218

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           +VG +L+  Y     L +++ VF +M+ R++V+W +LIS Y  +GL   AK + + M+ +
Sbjct: 219 FVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLD 278

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
            +KPDL+SW++L+SG++  G+   AL  +  M   G+ P V +W  +ISG +QN    ++
Sbjct: 279 GVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDA 338

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           L  F +M      PN  T++S+L  C GL  L+ GK IH +  K+G + + YV   +IDM
Sbjct: 339 LDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDM 398

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           YSK G+   A +VF K+ NK  A WN MI  +   G  ++A+ L   + + G++PD IT+
Sbjct: 399 YSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITY 458

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
             +L+    +GL  +  +    M     + P +  ++ ++    ++G   EA    R M 
Sbjct: 459 NTILSGHARNGLKTQAXELLSEM-VQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQ 517

Query: 868 FKPDA 872
              D 
Sbjct: 518 SPSDG 522



 Score =  130 bits (327), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 211/473 (44%), Gaps = 63/473 (13%)

Query: 296 ILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           I+TI  IL  CT L A  LG  +H    K G   +V+++ ++++ Y KC   + A K+F 
Sbjct: 354 IITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFX 413

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           +  + ++  +WNE+I   +   K E+A+ L R MQ    K    T   +L   A+ G   
Sbjct: 414 KAEN-KNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKT 472

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH------------- 460
           +  ++   +++  L+ N+   N LIS + ++     A +VF  M+               
Sbjct: 473 QAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLS 532

Query: 461 ----------------NLSSW----------------------NSMISSYTGLGYVDVAW 482
                           +L+ W                      ++++  Y     +D A 
Sbjct: 533 MRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSAN 592

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +F +++      + ++WN L++G+  +   +  L L   M   G +P+  +  ++  A 
Sbjct: 593 KVFFRIDGR----NTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPAC 648

Query: 543 TELRLLKYGRESHGYILRNGLD-YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
            ++  +++GR  HGY  +  LD     + ++L+DMY K   + +A+ VFD+   +++  W
Sbjct: 649 GDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLW 708

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
           N++IS +   G+  NA  +  QME   I PD +++ SL+S  +  G  +E     + M+ 
Sbjct: 709 NAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEI 768

Query: 662 S-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           S G+   +  +T ++          E+L F  QM      P++   ++LLQ C
Sbjct: 769 SYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPY---PPDACMWATLLQAC 818



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 42/246 (17%)

Query: 666 PN--VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           PN  V  + +LI    ++E + E    F  M  E + P+   + ++L+ C  + L + GK
Sbjct: 144 PNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGK 203

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            +H   ++     D +V   LI  YS  G+L S+R VF     + + SW           
Sbjct: 204 MVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSW----------- 252

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
                                   TAL++A    GL +E    F  M  D  + P +  +
Sbjct: 253 ------------------------TALISAYMEEGLXDEAKHIFHLMQLD-GVKPDLISW 287

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGALLGSCRIHGHLEYA-EIASRRLF 899
           S ++    + G +D A + +  MP    +P    W  ++  C  +G+LE A ++ SR L+
Sbjct: 288 SALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLW 347

Query: 900 KLEPCN 905
             E  N
Sbjct: 348 YPEDPN 353


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  408 bits (1048), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/728 (32%), Positives = 381/728 (52%), Gaps = 83/728 (11%)

Query: 396  SRTIVKMLQAC----AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            S T+V +L+A     A   A   G++ H + LK+ L                        
Sbjct: 10   SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL------------------------ 45

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
                 +  H   ++N+++S Y  LG V  A  LF      R   D++TWN ++S     G
Sbjct: 46   -----LHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGR--GDVVTWNTMVSVLVQSG 98

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVG 570
             +   +  L  M +LG RP+G + +  L A + L LL  GRE H Y++++  L  + +V 
Sbjct: 99   MFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVA 158

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKN--RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            ++L+DMY  ++ +  A++VFD + +  + +  WN++I GY   G+   A ++  +ME E 
Sbjct: 159  SALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA 218

Query: 629  --------------------------------IKPDLVS----WNSLVSGYSIWGQSKEA 652
                                            +K  +       N+L+  Y+  G++  A
Sbjct: 219  GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA 278

Query: 653  LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED---IKPNSTTMSSL 709
              I   +      P+VV+W +LI+G +   +  ++ +   +MQQ +   + PN+ T+ +L
Sbjct: 279  RRIFAMVD----LPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTL 334

Query: 710  LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            L  C  L     GKEIH   +++    D  V + L+DMY+K G L  +R VF +   +  
Sbjct: 335  LPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNT 394

Query: 770  ASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFD 828
             +WN +IM + ++G G EA +LF  +  +G  +P+ +TF A LAAC +SG+V+ G + F 
Sbjct: 395  ITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFH 454

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF-KPDATIWGALLGSCRIHGH 887
            +M  D+ + PT +  +C+VD+LG+AG LDEA+  + +M   +   + W  +LG+CR+H +
Sbjct: 455  AMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRN 514

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            +   EIA  RL +LEP  +++Y L+ N+ + + +W     +R  M   GV      SWI+
Sbjct: 515  VHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIE 574

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +D  +H F A  + HPA+ E++  +  L  EM   GY PDT CV  D+D+ +K  VL  H
Sbjct: 575  VDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCH 634

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLAI +GL++    A IRV KN RVC+DCH AAK++S + GREI LRD  RFHHFR G
Sbjct: 635  SEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNG 694

Query: 1068 ECSCNDCW 1075
            +CSC D W
Sbjct: 695  QCSCGDYW 702



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 178/395 (45%), Gaps = 18/395 (4%)

Query: 181 TLAKQAQLSCISSGFCF---LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHY 237
           TL     L     G  F   L   ++   L   +  HA +IK  ++  +  +  +L+  Y
Sbjct: 106 TLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMY 165

Query: 238 LEFGDFTSAAKAFFLY--FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK-GVIFRS 294
                   A + F +     +    W++ +  Y   G + +E L ++  +  + G +   
Sbjct: 166 ATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD-EEALRLFARMEAEAGFVPCE 224

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
             +  +L  C +  AF     VH  ++KRG   +  ++ ALM+ Y +    + A ++F+ 
Sbjct: 225 TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAM 284

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI---SRTIVKMLQACAKVGA 411
           V DL D + WN +I   +      +A +L REMQ      +   + T++ +L  CA + A
Sbjct: 285 V-DLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 343

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              GK+IHGY ++ AL+++++V + L+ MY++   L L+  VFD +   N  +WN +I +
Sbjct: 344 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 403

Query: 472 YTGLGYVDVAWSLFNKMNSS-RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFR 529
           Y   G    A  LF++M +S   +P+ +T+   L+     G     L L   M+   G  
Sbjct: 404 YGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 463

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           P       +L  V ++ L + GR    Y +   ++
Sbjct: 464 PTPD----ILACVVDI-LGRAGRLDEAYAMVTSME 493


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 248/722 (34%), Positives = 372/722 (51%), Gaps = 75/722 (10%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  ++K C  L A  LG  VH +    G D D+++  AL+  Y     ++ A ++F  + 
Sbjct: 150 LPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGM- 208

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D  D +LWN ++   ++     +A+ LFR M+ S       T+   L  CA       G 
Sbjct: 209 DERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGV 268

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+H   +K  LE  ++V N L+SMY++   LE                            
Sbjct: 269 QLHTLAVKYGLEPEVAVANTLVSMYAKCQCLE---------------------------- 300

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
               AW LF  M     + D++TWN ++SG   +G   + L L   MQ  G +P+  +++
Sbjct: 301 ---EAWRLFGLMP----RDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLA 353

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +L A+TEL   K G+E HGYI+RN    D+++ ++L+D+Y K   ++ AQ VFD  K+ 
Sbjct: 354 SLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSI 413

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS------------------ 638
           ++V  +++ISGY    +   A KM   +    IKP+ V   S                  
Sbjct: 414 DVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELH 473

Query: 639 -----------------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                            L+  YS  G+    L + H+M +     + VTW S+IS   QN
Sbjct: 474 GYVLKNAYEGRCYVESALMDMYSKCGR----LDLSHYMFSKMSAKDEVTWNSMISSFAQN 529

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
               E+L  F QM  E +K N+ T+SS+L  C GL  +  GKEIH + +K     D +  
Sbjct: 530 GEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAE 589

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
           + LIDMY K GNL+ A  VF     K   SWN +I  +  +G  KE++ L   + E GF+
Sbjct: 590 SALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFK 649

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            D +TF AL++AC ++G V+EG + F  M+ +Y+I P +EH SCMVDL  +AG LD+A  
Sbjct: 650 ADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQ 709

Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
           FI  MPFKPDA IWGALL +CR+H ++E AEIAS+ LFKL+P N   Y LM N+ A++ R
Sbjct: 710 FIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGR 769

Query: 922 WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
           W+ V ++R  M +  V+ +  +SW+ ++   H+F A    HP + EIY  L  L+ E+K+
Sbjct: 770 WDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQ 829

Query: 982 LG 983
            G
Sbjct: 830 EG 831



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 278/630 (44%), Gaps = 77/630 (12%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGF-----DFDVHLKCALMNFYGKCRDVESANKL 351
           L  +L+ C       LG+ +HA  +  G           L+  L+  Y   R    A  +
Sbjct: 39  LLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAV 98

Query: 352 FSEVS--DLEDDLLWNEIIMVKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACA 407
           FS +        L WN +I           A+  + +M    SS +    T+  ++++CA
Sbjct: 99  FSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCA 158

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +GA H G+ +H       L+ ++ V + LI MY+                         
Sbjct: 159 ALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADA----------------------- 195

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
                   G +D A  +F+ M+    + D + WN ++ G+   G   + + L R M++ G
Sbjct: 196 --------GLLDGAREVFDGMD----ERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASG 243

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             PN ++++  L        L  G + H   ++ GL+ ++ V  +L+ MY K  CL+ A 
Sbjct: 244 CDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAW 303

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-- 645
            +F  M   ++V WN +ISG    GL  +A ++   M++  ++PD V+  SL+   +   
Sbjct: 304 RLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELN 363

Query: 646 -WGQSKE------------------ALVIIH----------HMKNSGIYPNVVTWTSLIS 676
            + Q KE                  ALV I+          ++ ++    +VV  +++IS
Sbjct: 364 GFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMIS 423

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
           G + N     ++K F  +    IKPN+  ++S L  C  +  ++ G+E+H   LKN +  
Sbjct: 424 GYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEG 483

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
             YV + L+DMYSK G L  +  +F K + K   +WN MI  FA  G  +EA+ LF +++
Sbjct: 484 RCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMI 543

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
             G + + +T +++L+AC     +  G K    +     I   +   S ++D+ GK G L
Sbjct: 544 MEGVKYNNVTISSILSACAGLPAIYYG-KEIHGIIIKGPIRADLFAESALIDMYGKCGNL 602

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           + A      MP K + + W +++ +   HG
Sbjct: 603 ELALRVFEHMPEKNEVS-WNSIISAYGAHG 631



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/604 (24%), Positives = 264/604 (43%), Gaps = 80/604 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y + G    A + F     R    W+  ++ Y    G+V   + ++  +   G  
Sbjct: 187 ALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVK-AGDVASAVGLFRVMRASGCD 245

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L   L +C        GV++H   +K G + +V +   L++ Y KC+ +E A +L
Sbjct: 246 PNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRL 305

Query: 352 FSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           F  +    DDL+ WN +I   ++N   ++A++LF +MQ S  +  S T+  +L A  ++ 
Sbjct: 306 FGLMP--RDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELN 363

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
            F +GK+IHGY++++    ++ + + L+ +Y +   + +A  VFD+ K  ++   ++MIS
Sbjct: 364 GFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMIS 423

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y           + N+M+ + ++                        + R + +LG +P
Sbjct: 424 GY-----------VLNRMSEAAVK------------------------MFRYLLALGIKP 448

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           N   V+  L A   +  ++ G+E HGY+L+N  +   YV ++LMDMY K   L  +  +F
Sbjct: 449 NAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMF 508

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE----------------------- 627
             M  ++ V WNS+IS +   G    A  +  QM  E                       
Sbjct: 509 SKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIY 568

Query: 628 ------------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                        I+ DL + ++L+  Y   G  + AL +  HM       N V+W S+I
Sbjct: 569 YGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEK----NEVSWNSII 624

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGF 734
           S    +   +ES+     MQ+E  K +  T  +L+  C   G +Q G  +  C+  +   
Sbjct: 625 SAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHI 684

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFH 793
                  + ++D+YS++G L  A +       K  A  W  ++    ++ N + A +   
Sbjct: 685 EPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQ 744

Query: 794 ELLE 797
           EL +
Sbjct: 745 ELFK 748


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/591 (36%), Positives = 323/591 (54%), Gaps = 53/591 (8%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            VLQ   +L+ ++ GR  H  I  N ++ D  +G+ L+ MYV    L+  + +FD + N  
Sbjct: 107  VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--------------DLVSWNSLVSGY 643
            +  WN L++GY   G F  +  +  +M E  I+               D++SWNS++SGY
Sbjct: 167  VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGY 226

Query: 644  SIWGQSKEALVIIHHMKNSGIYPN------------------------------------ 667
               G S++ L +   M   GI  +                                    
Sbjct: 227  VSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG 286

Query: 668  ---VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
               VV+WTS+I+G  +      S++ F +M++ED+ PNS TM+ +L  C  L  L+ G+E
Sbjct: 287  ERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQE 346

Query: 725  IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            IH   L+NGF  D +VA  L+DMY K G L  AR +F     K L SW  MI G+ ++G 
Sbjct: 347  IHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGY 406

Query: 785  GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
            G EAI  F+E+  +G +PD ++F ++L AC +SGL++EGW +F+ M  +  I P  EHY+
Sbjct: 407  GSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYA 466

Query: 845  CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
            C+VDLL +AG L +A+ FI+ MP +PDATIWGALL  CRI+  ++ AE  +  +F+LEP 
Sbjct: 467  CIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPE 526

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            N+  Y L+ N+ A + +WE+V++LR  +   G++     SWI+I   VH+F    + HP 
Sbjct: 527  NTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPL 586

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
              +I   L    + MK+ G+ P  R      D+ EK   L  H+EK+A+ +G++      
Sbjct: 587  ANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGK 646

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +RV KN RVC DCH  AK+MS +  R+I LRD  RFHHF++G CSC   W
Sbjct: 647  TVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 187/420 (44%), Gaps = 18/420 (4%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R    +L+LC  L +   G  +H+ +     + D  L   L+  Y  C D+    ++F +
Sbjct: 102 RTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           V++ E   LWN ++    +   +  ++ LF+ M+    + +  +  K+            
Sbjct: 162 VAN-EKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVE-SARKLFDELGDRDVISW 219

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
              I GYV     E  L +      M       +LAT     M    L+  N ++  Y+ 
Sbjct: 220 NSMISGYVSNGLSEKGLDL---FEQMLLLGINTDLAT-----MVSVELTLNNCLLDMYSK 271

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            G ++ A  +F  M     +  +++W  +++G+   G     + L   M+     PN  +
Sbjct: 272 SGNLNSAIQVFETMG----ERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSIT 327

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
           ++ +L A   L  L+ G+E HG+ILRNG   D +V  +L+DMY+K   L  A+ +FD + 
Sbjct: 328 MACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 387

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
            +++V+W  +I+GY   G    A    N+M    I+PD VS+ S++   S  G   E   
Sbjct: 388 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 447

Query: 655 IIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             + M+N+  I P    +  ++    +  N  ++ KF   M    I+P++T   +LL  C
Sbjct: 448 FFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMP---IEPDATIWGALLCGC 504



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 24/294 (8%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L+F Y+  GD     + F    +     W+  +  Y   G   +E L ++  +   G+  
Sbjct: 142 LVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGN-FRESLSLFKRMRELGIRR 200

Query: 293 RSRILTIILKLCTKLMAFW---LGVEVHASLIKRGFDF-------------------DVH 330
                 +  +L  + +  W   +   V   L ++G D                    ++ 
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELT 260

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           L   L++ Y K  ++ SA ++F  + +    + W  +I    R    + +++LF EM+  
Sbjct: 261 LNNCLLDMYSKSGNLNSAIQVFETMGE-RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 319

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                S T+  +L ACA + A   G++IHG++L++    +  V N L+ MY +   L LA
Sbjct: 320 DLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLA 379

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +FD + + +L SW  MI+ Y   GY   A + FN+M +S I+PD +++  +L
Sbjct: 380 RLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 433



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 23/205 (11%)

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
           N R +++   Q  + D++    T  S+LQ C  L  +Q+G+ IH +   N    D  + +
Sbjct: 83  NLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGS 140

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ- 801
            L+ MY   G+L+  R +F K AN+ +  WN ++ G+A  GN +E++ LF  + E G + 
Sbjct: 141 KLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRR 200

Query: 802 -------------PDAITFTALLAACKNSGLVEEGWKYFDSM-----STDYNIIPTIEHY 843
                         D I++ ++++   ++GL E+G   F+ M     +TD   + ++E  
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELT 260

Query: 844 --SCMVDLLGKAGYLDEAWDFIRTM 866
             +C++D+  K+G L+ A     TM
Sbjct: 261 LNNCLLDMYSKSGNLNSAIQVFETM 285



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 4/239 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L+  Y + G+  SA + F     RS   W+S +  Y   G     +  ++ E+  + +  
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV-RLFHEMEKEDLFP 323

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
            S  +  IL  C  L A   G E+H  +++ GF  D H+  AL++ Y KC  +  A  LF
Sbjct: 324 NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLF 383

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             + + +D + W  +I     +     AI  F EM+ S  +    + + +L AC+  G  
Sbjct: 384 DMIPE-KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLL 442

Query: 413 HEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
            EG      +  +  +E       C++ + +R   L  A +    M  + + + W +++
Sbjct: 443 DEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501


>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
          Length = 662

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/655 (34%), Positives = 357/655 (54%), Gaps = 52/655 (7%)

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT-GLGYVDVA 481
            L SA     S+    ++   R   L  A   F S      +++N +++ Y   LG +  A
Sbjct: 58   LASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADA 117

Query: 482  WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
              LF+++ +    PD +++N LLS HF  G       L   M                  
Sbjct: 118  RHLFDRIPT----PDAVSYNTLLSCHFASGDADGARRLFASMP----------------- 156

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                             +R+ + ++     +++    K+  ++ A+ VF  M  RN V+W
Sbjct: 157  -----------------VRDVVSWN-----TMVSGLSKSGAVEEAKAVFLAMPVRNSVSW 194

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            N+++SG+        A++      E   K D V W ++VSGY   G   +A+     M  
Sbjct: 195  NAMVSGFACSRDMSAAEEWFRNAPE---KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMP- 250

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQ 720
                 N+V+W ++++G ++N +  ++L+ F  M +E +++PN++T+SS+L  C  L  L 
Sbjct: 251  ---VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALG 307

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             GK+IH  C+K    ++  V T L+ MY K G+L SA ++F +   + + +WN MI G+A
Sbjct: 308  FGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYA 367

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
             +G+GKEAI LF  + + G +P+ ITF A+L AC ++GL + G + F+ M   Y I P +
Sbjct: 368  QHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRV 427

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            +HYSCMVDLL +AG L+ A D IR+MPF+P  + +G LL +CR++ +LE+AE+A+ +L +
Sbjct: 428  DHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIE 487

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
             +P ++  Y  + N+ A +N+W+DV R+R  M +  V     +SWI+I  ++H F +   
Sbjct: 488  KDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDR 547

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP    I+ +L  L   MK +GYVPD   V  D+DE  K ++L+ H+EKLAI +GL+ T
Sbjct: 548  LHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLIST 607

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                 +R+ KN RVC DCH AAK +S +  REI LRD  RFHHFR G CSC D W
Sbjct: 608  APGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 178/387 (45%), Gaps = 25/387 (6%)

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           C L  +      +  A  LF  +    D + +N ++     +   + A +LF  M     
Sbjct: 102 CLLAGYARALGRLADARHLFDRIPT-PDAVSYNTLLSCHFASGDADGARRLFASMPV--- 157

Query: 393 KAISRTIVK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               R +V    M+   +K GA  E K +    L   + +++S  N ++S ++ +  +  
Sbjct: 158 ----RDVVSWNTMVSGLSKSGAVEEAKAV---FLAMPVRNSVS-WNAMVSGFACSRDMSA 209

Query: 450 ATRVF-DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           A   F ++ +  +   W +M+S Y  +G V  A   F  M       ++++WN +++G+ 
Sbjct: 210 AEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVR----NLVSWNAVVAGYV 265

Query: 509 THGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
            +    + L L R M +    +PN S++S VL   + L  L +G++ H + ++  L  +L
Sbjct: 266 KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNL 325

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            VGTSL+ MY K   L +A ++F  M  R++VAWN++ISGY   G    A  +  +M++E
Sbjct: 326 TVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDE 385

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRE 686
            ++P+ +++ ++++     G     +     M+   GI P V  ++ ++    +      
Sbjct: 386 GVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 445

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           ++     M  E   P+ +   +LL  C
Sbjct: 446 AVDLIRSMPFE---PHPSAYGTLLAAC 469



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 6/255 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y++ G+   A + F     R+   W++ +  Y         L      +    V 
Sbjct: 228 AMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQ 287

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +  L+ +L  C+ L A   G ++H   +K     ++ +  +L++ Y KC D+ SA KL
Sbjct: 288 PNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKL 347

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+    D + WN +I    ++   + AI LF  M+    +    T V +L AC   G 
Sbjct: 348 FGEMHT-RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 406

Query: 412 FHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
              G +   G      +E  +   +C++ +  R  KLE A  +  SM  + + S++ +++
Sbjct: 407 CDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLL 466

Query: 470 SS---YTGLGYVDVA 481
           ++   Y  L + ++A
Sbjct: 467 AACRVYKNLEFAELA 481


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
          Length = 681

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/703 (33%), Positives = 374/703 (53%), Gaps = 73/703 (10%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS--RNNKLELATRVFDSMKDH 460
            LQ C   G   E  Q+H   +K+A  ++ SV + L+++Y+  R N L+ A  +FD ++  
Sbjct: 22   LQNC---GTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQ-- 76

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
                                             +P +++WN L+  +  +    + + L 
Sbjct: 77   ---------------------------------EPTLVSWNLLIKCYIENQRSNDAIALF 103

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
              +    F P+  ++  VL+    L  L+ G++ HG +L+ G   D +V +SL+ MY K 
Sbjct: 104  CKLLC-DFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKC 162

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------------- 627
              ++  ++VFD M+++++V+WNSLI GY   G    A +M  +M E+             
Sbjct: 163  GEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLS 222

Query: 628  -----EIKPDL---------VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                 E   D+         VSWN++++GY   G S  A  +   M       ++VTW S
Sbjct: 223  KSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPER----SLVTWNS 278

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I+G  +N+ + ++LK F  M +EDI PN TT+   +    G+  L  G+ +H   +K+G
Sbjct: 279  MITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSG 338

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            F  D  + T LI+MYSK G++KSA  VFR    K L  W  +I+G  ++G  ++ + LF 
Sbjct: 339  FKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFD 398

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            E+  TG +P AITF  +L AC ++G  E+  +YF  M+ DY I P+IEHY C++D+L +A
Sbjct: 399  EMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRA 458

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G+L+EA D I  MP K +  IW +LL   R HG++   E A++ L  L P  +  Y ++ 
Sbjct: 459  GHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILS 518

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A +  WE V ++R  M + G+K     S I+    +H F      HP T EIY +L 
Sbjct: 519  NMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLC 578

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEE-EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
             +  ++   G++PDT  V   ++E+ EK   L +H+E+LAI +GL+  K  +PIR+IKN 
Sbjct: 579  EMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNL 638

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C+DCH   K +S +  REI +RDG+RFHHF+ G CSC D W
Sbjct: 639  RICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 210/469 (44%), Gaps = 57/469 (12%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +LK C +L A   G ++H  ++K GF  D  +  +L++ Y KC ++E   K+F  + 
Sbjct: 117 LPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRME 176

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D +D + WN +I    R  + E A+++F EM      + S TI                 
Sbjct: 177 D-KDVVSWNSLIDGYARCGEIELALEMFEEM--PEKDSFSWTI----------------- 216

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
                               LI   S++ KLE A  VFD M   N  SWN+MI+ Y   G
Sbjct: 217 --------------------LIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAG 256

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A  LF++M     +  ++TWN +++G+  +  +   L L   M      PN +++ 
Sbjct: 257 DSNTAKELFDQMP----ERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTIL 312

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             + A + +  L  GR  H YI+++G   D  +GT L++MY K   +++A  VF ++  +
Sbjct: 313 GAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKK 372

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
            +  W S+I G    GL     ++ ++M    +KP  +++  +++  S  G +++A    
Sbjct: 373 KLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYF 432

Query: 657 HHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
             M  + GI P++  +  LI    +  +  E+     +M    IK N    +SLL     
Sbjct: 433 KMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMP---IKANKVIWTSLLSGSRK 489

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATG----LIDMYSKSGNLKSAREV 760
            G ++ G+           I  A   TG    L +MY+ +G  +  R+V
Sbjct: 490 HGNIRMGEYA-----AQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQV 533



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 175/419 (41%), Gaps = 58/419 (13%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYF 254
           C L    +   L   K  H  ++K+G  +  D  V  SL+  Y + G+     K F    
Sbjct: 119 CVLKGCARLGALQEGKQIHGLVLKIG--FGVDKFVLSSLVSMYSKCGEIELCRKVFDRME 176

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            +    W+S ++ Y +  GE++  LE++ E+  K     S   TI++   +K        
Sbjct: 177 DKDVVSWNSLIDGY-ARCGEIELALEMFEEMPEKD----SFSWTILIDGLSKSGKLEAAR 231

Query: 315 EVHASL-IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           +V   + I+    ++     A++N Y K  D  +A +LF ++ +    + WN +I    R
Sbjct: 232 DVFDRMPIRNSVSWN-----AMINGYMKAGDSNTAKELFDQMPE-RSLVTWNSMITGYER 285

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N+++  A+KLF  M          TI+  + A + + +   G+ +H Y++KS  +++  +
Sbjct: 286 NKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVL 345

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              LI MYS+   ++ A RVF S+    L  W S+I      G V+    LF++M  + +
Sbjct: 346 GTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGL 405

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           +P  IT+                + +L      GF                        +
Sbjct: 406 KPHAITF----------------IGVLNACSHAGF----------------------AED 427

Query: 554 SHGYILRNGLDYDLYVGTS----LMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISG 607
           +H Y      DY +         L+D+  +   L+ A++  + M  + N V W SL+SG
Sbjct: 428 AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSG 486


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/739 (32%), Positives = 381/739 (51%), Gaps = 69/739 (9%)

Query: 279 LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
           L++W   H    +  S     ++K C  L A  LG  VH +    G D D+ +  AL+  
Sbjct: 133 LKMWA--HPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKM 190

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           Y     +  A ++F  +++  D +LWN ++   ++     +A++LF +M+ S  +    T
Sbjct: 191 YANGGLLWDARQVFDGMAE-RDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFAT 249

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           +   L   A       G Q+H   +K  LES ++V N L+SMY++   L           
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCL----------- 298

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
                               D  W LF  M     + D++TWN ++SG   +G     L 
Sbjct: 299 --------------------DDGWKLFGLMP----RDDLVTWNGMISGCVQNGFVDQALL 334

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           L   MQ  G RP+  ++  +L A+T+L     G+E HGYI+RN +  D+++ ++L+D+Y 
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYF 394

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           K   ++ AQ V+D+ K  ++V  +++ISGY   G+   A KM   + E+ I+P+ V+  S
Sbjct: 395 KCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIAS 454

Query: 639 LVSGYSIWGQSKEA-------------------------------LVIIHHMKNSGIYPN 667
           ++   +     K                                 L + H++ +     +
Sbjct: 455 VLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            VTW S+IS   QN    E+L  F +M  E +K ++ T+SS+L  C  L  +  GKEIH 
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHG 574

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
           + +K     D +  + LIDMY K GNL+ A  VF     K   SWN +I  +  YG  KE
Sbjct: 575 VVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKE 634

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
           ++ L   + E GF+ D +TF AL++AC ++G V+EG + F  M+ +Y I P +EH++CMV
Sbjct: 635 SVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMV 694

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
           DL  +AG LD+A + I  MPFKPDA IWGALL +CR+H ++E AEIAS+ LFKL+P NS 
Sbjct: 695 DLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSG 754

Query: 908 NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            Y LM N+ A++ RW+ V ++R  M +  V+ +  +SW+ ++   H+F A    HP + +
Sbjct: 755 YYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSED 814

Query: 968 IYFELYHLVSEMKKLGYVP 986
           IY  L  ++ E+++ GY+P
Sbjct: 815 IYMSLKSILLELREEGYIP 833



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 259/600 (43%), Gaps = 72/600 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y   G    A + F     R    W+  ++ Y    G V   +E++G++   G  
Sbjct: 186 ALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK-AGSVSSAVELFGDMRASGCE 244

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L   L +       + GV++H   +K G + +V +   L++ Y KC+ ++   KL
Sbjct: 245 PNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKL 304

Query: 352 FSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           F  +    DDL+ WN +I   ++N   + A+ LF +MQ S  +  S T+V +L A   + 
Sbjct: 305 FGLMP--RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLN 362

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
            F++GK++HGY++++ +  ++ + + L+ +Y +   + +A  V+DS K  ++   ++MIS
Sbjct: 363 GFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y                                     +G  Q  + + R +   G RP
Sbjct: 423 GYV-----------------------------------LNGMSQEAVKMFRYLLEQGIRP 447

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           N  +++ VL A   +  +K G+E H Y L+N  +   YV ++LMDMY K   L  +  +F
Sbjct: 448 NAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIF 507

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----I 645
             +  ++ V WNS+IS +   G    A  +  +M  E +K   V+ +S++S  +      
Sbjct: 508 SKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIY 567

Query: 646 WGQSKEALVI--------------------------IHHMKNSGIYPNVVTWTSLISGSL 679
           +G+    +VI                           H +  S    N V+W S+I+   
Sbjct: 568 YGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYG 627

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDA 738
                +ES+     MQ+E  K +  T  +L+  C   G +Q G  +  C+  +       
Sbjct: 628 AYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRM 687

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLE 797
                ++D+YS++G L  A E+      K  A  W  ++    ++ N + A +   EL +
Sbjct: 688 EHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFK 747



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 227/530 (42%), Gaps = 70/530 (13%)

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSRNNKLELATRVFD 455
           R ++ +L+ C        G Q+HG  + + L  ++ ++   L+ MY    +   A  VF 
Sbjct: 40  RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFS 99

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
           S+                  G    A                + WN L+ G    G Y++
Sbjct: 100 SLPR----------------GAAACA----------------LPWNWLIRGLTMAGDYRS 127

Query: 516 VLTLLRGM--QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            L     M        P+  +   V+++   L  +  GR  H      GLD D++VG++L
Sbjct: 128 ALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSAL 187

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           + MY     L +A++VFD M  R+ V WN ++ GY   G   +A ++   M     +P+ 
Sbjct: 188 IKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNF 247

Query: 634 VSWNSLVSGYS-----IWGQSKEALVIIHHMKNS------------------------GI 664
            +    +S  +      +G     L + + +++                         G+
Sbjct: 248 ATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGL 307

Query: 665 YP--NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
            P  ++VTW  +ISG +QN    ++L  F  MQ+  I+P+S T+ SLL     L     G
Sbjct: 308 MPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQG 367

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           KE+H   ++N    D ++ + L+D+Y K   ++ A+ V+  S    +   + MI G+ + 
Sbjct: 368 KELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLN 427

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD-SMSTDYNIIPTIE 841
           G  +EA+ +F  LLE G +P+A+   ++L AC +   ++ G +    ++   Y     +E
Sbjct: 428 GMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVE 487

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             S ++D+  K G LD +  +I +     D   W +++ S   +G  E A
Sbjct: 488 --SALMDMYAKCGRLDLS-HYIFSKISAKDEVTWNSMISSFAQNGEPEEA 534


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 244/744 (32%), Positives = 380/744 (51%), Gaps = 105/744 (14%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            + +L+ C  +  F   KQIH  ++K+ L + + V + LI   +                 
Sbjct: 32   LNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCA----------------- 71

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
                     +S    L Y   A SLF + N    + ++  WN L+ G+    S  + L L
Sbjct: 72   ---------VSPSGDLSY---ALSLFEE-NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHL 118

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY-- 577
               M   G +PN  +   + ++ T+ +    G++ H + L+  L ++ +V TS++ MY  
Sbjct: 119  FSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYAS 178

Query: 578  -----------------------------VKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
                                         V   CL +A+ +FD +  +++V+WN++ISGY
Sbjct: 179  VGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGY 238

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPD----------------------LVSW---------- 636
               G F  A     +M+E  + P+                      + SW          
Sbjct: 239  VQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNL 298

Query: 637  ---NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
               N+L+  Y   G++  A  +   ++      +V++W ++I G      Y E+L  F  
Sbjct: 299  QLTNALIDMYCKCGETDIARELFDGIEEK----DVISWNTMIGGYSYLSLYEEALALFEV 354

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVATGLIDMYSKSG 752
            M + ++KPN  T   +L  C  LG L  GK +H    KN     +A + T LIDMY+K G
Sbjct: 355  MLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCG 414

Query: 753  NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFTALL 811
             +++A  VFR   ++ LASWN M+ GFA++G+ + A+ LF E++  G F+PD ITF  +L
Sbjct: 415  CIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVL 474

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            +AC  +GLV+ G +YF SM  DY I P ++HY CM+DLL +A   +EA   ++ M  +PD
Sbjct: 475  SACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPD 534

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
              IWG+LL +C+ HG +E+ E  + RLF+LEP N+  + L+ N+ A + RW+DV R+R  
Sbjct: 535  GAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTR 594

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            +++ G+K V   + I+ID  VH F      HP    IY  L  +   +++ G+VP+T  V
Sbjct: 595  LNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEV 654

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+DEE K   L  H+EKLAI +GL+KTK    IR++KN RVC +CH+A K +S +  R
Sbjct: 655  LYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNR 714

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI  RD  RFHHF++G CSCNDCW
Sbjct: 715  EIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 151/609 (24%), Positives = 271/609 (44%), Gaps = 105/609 (17%)

Query: 167 ITNSPTSLAL---PPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKI 223
           +T+SP+   L   P +D   K      I     +LN   K + +++ K  H+ +IK G  
Sbjct: 4   VTSSPSPSILHFLPASDPPYK------ILEQHPYLNLLEKCKNINTFKQIHSLIIKTG-- 55

Query: 224 WNSDDMVKSLIFHYLEF---GDFTSAAKAFF---LYFSRSYADWSSFLEDYESFGGEVQE 277
            N+   V+S + H+      GD + A   F     +   +   W+S +  Y      +  
Sbjct: 56  LNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSS 115

Query: 278 LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
           L      L+  GV   S     + K CTK  A   G ++HA  +K    F+ H+  ++++
Sbjct: 116 LHLFSRMLY-YGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIH 174

Query: 338 FYGKC---------------RD----------------VESANKLFSEVSDLEDDLLWNE 366
            Y                  RD                ++ A +LF E+  ++D + WN 
Sbjct: 175 MYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP-VKDVVSWNA 233

Query: 367 IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
           +I   +++ ++E AI  F EMQ ++      T+V +L AC    +   GK I  +V  + 
Sbjct: 234 MISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNG 293

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
             SNL + N LI MY +  + ++A  +FD +++ ++ SWN+MI  Y+ L   + A +LF 
Sbjct: 294 FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFE 353

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            M  S ++P+ +T+                         LG          +L A   L 
Sbjct: 354 VMLRSNVKPNDVTF-------------------------LG----------ILHACACLG 378

Query: 547 LLKYGRESHGYI---LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            L  G+  H YI   LRN  +  L+  TSL+DMY K  C++ A+ VF +M +RN+ +WN+
Sbjct: 379 ALDLGKWVHAYIDKNLRNSSNASLW--TSLIDMYAKCGCIEAAERVFRSMHSRNLASWNA 436

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEI-KPDLVSWNSLVSGYSIWGQSKEALVIIHH---- 658
           ++SG+   G    A  + ++M  + + +PD +++  ++S       ++  LV + H    
Sbjct: 437 MLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSAC-----TQAGLVDLGHQYFR 491

Query: 659 --MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
             +++ GI P +  +  +I    + E + E+    I M+  +++P+     SLL  C   
Sbjct: 492 SMIQDYGISPKLQHYGCMIDLLARAEKFEEAE---ILMKNMEMEPDGAIWGSLLSACKAH 548

Query: 717 GLLQNGKEI 725
           G ++ G+ +
Sbjct: 549 GRVEFGEYV 557


>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
          Length = 613

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/646 (34%), Positives = 355/646 (54%), Gaps = 52/646 (8%)

Query: 432  SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT-GLGYVDVAWSLFNKMNS 490
            S+    ++   R+  L  A   F S      +++N +++ Y    G +  A  LF+++ +
Sbjct: 18   SLSTAAVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPT 77

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                PD++++N LL  HF  G       L   M                           
Sbjct: 78   ----PDVVSYNTLLLCHFASGDADGARRLFASMPV------------------------- 108

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
                           D+    +++    K+  ++ A+ VF  M  RN V+WN+++SG+  
Sbjct: 109  --------------RDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFAC 154

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
             G    A++      E+E   D V W ++VSGY   G   +A+     M       N+V+
Sbjct: 155  SGDMSTAEEWFRNAPEKE---DAVLWTAMVSGYMDIGNVVKAIKYFEAMP----VRNLVS 207

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            W ++++G ++N +  ++L+ F  M +E +++PN++T+SS+L  C  L  L  GK+IH  C
Sbjct: 208  WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWC 267

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            +K    ++  V T L+ MY K G+L SA  +F +   + + +WN MI G+A +G+GKEAI
Sbjct: 268  MKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAI 327

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             LF  + + G +P+ ITF  +L AC ++GL + G + F+ M   Y I P ++HYSCMVDL
Sbjct: 328  NLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDL 387

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L +AG L+ A DFIR+MPF+P  + +G LL +CR++ +LE+AE+A+ +L + +P ++  Y
Sbjct: 388  LCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAY 447

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
              + N+ A++N+W+DV R+R  M +  V     +SWI+I  ++H F +    HP    I+
Sbjct: 448  VQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIH 507

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             +L  L   MK++GYVPD   V  D+DE  K ++L+ H+EKLAI +GL+ T     +R+ 
Sbjct: 508  EKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIF 567

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVC DCH AAK +S++  REI LRD  RFHHFR G CSC+D W
Sbjct: 568  KNLRVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 177/384 (46%), Gaps = 19/384 (4%)

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           C L  +      +  A  LF  +    D + +N +++    +   + A +LF  M     
Sbjct: 53  CLLAGYARAPGRLADARHLFDRIPT-PDVVSYNTLLLCHFASGDADGARRLFASMPVRDV 111

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            + +     M+   +K GA  E K +    L   + +++S  N ++S ++ +  +  A  
Sbjct: 112 ASWN----TMVSGLSKSGAVEEAKVV---FLAMPVRNSVS-WNAMVSGFACSGDMSTAEE 163

Query: 453 VF-DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
            F ++ +  +   W +M+S Y  +G V  A   F  M       ++++WN +++G+  + 
Sbjct: 164 WFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVR----NLVSWNAVVAGYVKNS 219

Query: 512 SYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
              + L L R M +    +PN S++S VL   + L  L +G++ H + ++  L  +L VG
Sbjct: 220 HADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVG 279

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           TSL+ MY K   L +A  +F  M  R++VAWN++ISGY   G    A  +  +M++E ++
Sbjct: 280 TSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 339

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRESLK 689
           P+ +++  +++     G     +     M+   GI P V  ++ ++    +      ++ 
Sbjct: 340 PNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVD 399

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
           F   M  E   P+ +   +LL  C
Sbjct: 400 FIRSMPFE---PHPSAYGTLLAAC 420



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 6/255 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y++ G+   A K F     R+   W++ +  Y         L      +    V 
Sbjct: 179 AMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQ 238

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +  L+ +L  C+ L A   G ++H   +K     ++ +  +L++ Y KC D+ SA  L
Sbjct: 239 PNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACIL 298

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+    D + WN +I    ++   + AI LF  M+    +    T V +L AC   G 
Sbjct: 299 FGEMHT-RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGL 357

Query: 412 FHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
              G Q   G      +E  +   +C++ +  R  KLE A     SM  + + S++ +++
Sbjct: 358 CDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLL 417

Query: 470 SS---YTGLGYVDVA 481
           ++   Y  L + ++A
Sbjct: 418 AACRVYKNLEFAELA 432


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/542 (38%), Positives = 316/542 (58%), Gaps = 45/542 (8%)

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+  YV+N  +  A++VFD M  RN+V+W ++I GY  +GL   A+ +  +M E  +   
Sbjct: 31   LVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNV--- 87

Query: 633  LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP-------------------------- 666
             VSW  ++ G    G+  EA  +   M    +                            
Sbjct: 88   -VSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQ 146

Query: 667  -NVVTWTSLISGSLQNENYR-------------ESLKFFIQMQQEDIKPNSTTMSSLLQT 712
             NVV WTS+ISG   +  +              E+L  F  MQ+E ++P+  ++ S+L  
Sbjct: 147  RNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSV 206

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
            CG L  L +G+++H   +++ F  D YV++ LI MY K G+L +A+ VF + ++K +  W
Sbjct: 207  CGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMW 266

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            N +I G+A +G G++A+ +FH++  +   PD ITF  +L+AC  +G V+EG + F+SM +
Sbjct: 267  NSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKS 326

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
             Y + P  EHY+CMVDLLG+AG L+EA + I  MP + DA +WGALLG+CR H +L+ AE
Sbjct: 327  KYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAE 386

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
            IA+++L +LEP N+  Y L+ NL +  +RW+DV  LR +M    ++     SWI++D+ V
Sbjct: 387  IAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKV 446

Query: 953  HVFSAEGA-PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKL 1011
            H+FS  G+  HP    I  +L  L + +++ GY PD   V  D+DEEEK   L  H+EKL
Sbjct: 447  HIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDHSEKL 506

Query: 1012 AIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            A+ YGL+K     PIRV+KN RVC D H+  K ++ V GREI LRD  RFHHF++G CSC
Sbjct: 507  AVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDGLCSC 566

Query: 1072 ND 1073
            +D
Sbjct: 567  SD 568



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 158/342 (46%), Gaps = 32/342 (9%)

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
           M  Y + +    A KLF ++ +  + + WN ++   ++N     A K+F +M        
Sbjct: 1   MAGYFQNKRPREARKLFDKMPET-NTISWNGLVSGYVQNGMISEARKVFDKMP------- 52

Query: 396 SRTIVK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            R +V    M++   + G   E +     +     E N+     ++     + +++ A +
Sbjct: 53  ERNVVSWTAMIRGYVQEGLIEEAE----LLFWRMPERNVVSWTVMLGGLIEDGRVDEARQ 108

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +FD M   ++ +  +MI      G +  A  +F++M     Q +++ W  ++SG    G+
Sbjct: 109 LFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMP----QRNVVAWTSMISGEKDDGT 164

Query: 513 YQNV-------------LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           +  +             L L   MQ  G RP+  SV  VL     L  L +GR+ H  ++
Sbjct: 165 WSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLV 224

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           R+  D D+YV + L+ MY+K   L  A+ VFD   +++IV WNS+I+GY   G    A +
Sbjct: 225 RSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALE 284

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
           + + M    I PD +++  ++S  S  G+ KE L I   MK+
Sbjct: 285 VFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKS 326



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 64/332 (19%)

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           M  Y +N   + A+++FD M   N ++WN L+SGY   G+   A+K+ ++M E  +    
Sbjct: 1   MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNV---- 56

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           VSW +++ GY   G  +EA ++   M       NVV+WT ++ G +++    E+ + F  
Sbjct: 57  VSWTAMIRGYVQEGLIEEAELLFWRMPER----NVVSWTVMLGGLIEDGRVDEARQLF-- 110

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
               D+ P                                 +KD   +T +ID     G 
Sbjct: 111 ----DMMP---------------------------------VKDVVASTNMIDGLCSEGR 133

Query: 754 LKSAREVFRKSANKTLASWNCMIMG----------FAIY---GNGKEAILLFHELLETGF 800
           L  ARE+F +   + + +W  MI G            IY   G   EA+ LF  +   G 
Sbjct: 134 LIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGV 193

Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSM-STDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
           +P   +  ++L+ C +   ++ G +    +  + ++I   I   S ++ +  K G L  A
Sbjct: 194 RPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDI--DIYVSSVLITMYIKCGDLVTA 251

Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
                    K D  +W +++     HG  E A
Sbjct: 252 KRVFDRFSSK-DIVMWNSIIAGYAQHGFGEKA 282



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 134/272 (49%), Gaps = 7/272 (2%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           WS+ ++ YE  G E+ E L ++  +  +GV      +  +L +C  L +   G +VH+ L
Sbjct: 165 WSTMIKIYERKGFEL-EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQL 223

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           ++  FD D+++   L+  Y KC D+ +A ++F   S  +D ++WN II    ++   E A
Sbjct: 224 VRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSS-KDIVMWNSIIAGYAQHGFGEKA 282

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI-HGYVLKSALESNLSVCNCLIS 439
           +++F +M  SS      T + +L AC+  G   EG +I      K  ++       C++ 
Sbjct: 283 LEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVD 342

Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           +  R  KL  A  + ++M  + +   W +++ +      +D+A     K+   +++P+  
Sbjct: 343 LLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKL--LQLEPNNA 400

Query: 499 TWNCLLSGHFTHGS-YQNVLTLLRGMQSLGFR 529
               LLS  ++  S +++V+ L + M++   R
Sbjct: 401 GPYILLSNLYSSQSRWKDVVELRKTMRAKNLR 432


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/676 (34%), Positives = 354/676 (52%), Gaps = 77/676 (11%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            +  L++C  +      K IH +++++    ++   +CLIS+    N L+ A +VF  +++
Sbjct: 19   LSFLESCTTLSHL---KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQN 75

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             NL  +NS I  ++G    D ++  + +   + + PD +T+  L+               
Sbjct: 76   PNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLV--------------- 120

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
                                +A T+   L  G ++HG I+R+G D D+YV  SL+ MY  
Sbjct: 121  --------------------KACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYST 160

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
               +++A  VF  +               C                      D+VSW S+
Sbjct: 161  LGDIKSASYVFRRIS--------------CL---------------------DVVSWTSM 185

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            V+GY   G    A  +   M       N+VTW+ +ISG  +N  + ++++ +  +Q E +
Sbjct: 186  VAGYIKSGDVTSARKLFDKMPEK----NLVTWSVMISGYAKNSFFDKAIELYFLLQSEGV 241

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
              N T M S++ +C  LG L+ G+  H   L+N    +  + T L+DMY++ G++  A  
Sbjct: 242  HANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIW 301

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF +   +   SW  +I GFA++G  ++A+  F  + + G  P  ITFTA+L+AC + GL
Sbjct: 302  VFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGL 361

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            VE G + F+SM  DY I P +EHY CMVDLLG+AG L EA  F+  MP KP+A IWGALL
Sbjct: 362  VERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
            G+CRIH + E AE A + L +L+P +S  Y L+ N+ A +N+WE+VE +R  M E GV  
Sbjct: 422  GACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVK 481

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
               ++  ++D  VH F+     HP   +I      ++ +++  GY  +      DIDEEE
Sbjct: 482  PPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEE 541

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K   +  H+EKLAI Y +M+TK   PIR++KN RVC DCHTA K +S V  RE+ +RD  
Sbjct: 542  KESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRN 601

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF+ G CSC D W
Sbjct: 602  RFHHFKGGACSCMDYW 617



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 206/414 (49%), Gaps = 12/414 (2%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L+ CT L    +   +HA LI+    FDV     L++       ++ A ++F ++ +  +
Sbjct: 22  LESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQN-PN 77

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
             ++N  I     ++  + +   + + + +     + T   +++AC + G+   G Q HG
Sbjct: 78  LFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHG 137

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
            +++   +S++ V N L++MYS    ++ A+ VF  +   ++ SW SM++ Y   G V  
Sbjct: 138 QIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTS 197

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
           A  LF+KM     + +++TW+ ++SG+  +  +   + L   +QS G   N + +  V+ 
Sbjct: 198 ARKLFDKMP----EKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIA 253

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
           +   L  L+ G  +H YILRN +  +L +GT+L+DMY +   +  A  VFD +  R+ ++
Sbjct: 254 SCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALS 313

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           W +LI+G+   G    A +  ++ME+  + P  +++ +++S  S  G  +  L +   MK
Sbjct: 314 WTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMK 373

Query: 661 NS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               I P +  +  ++    +     E+ KF  +M    +KPN+    +LL  C
Sbjct: 374 RDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMP---MKPNAPIWGALLGAC 424



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 162/348 (46%), Gaps = 32/348 (9%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           LS +K  HA +I+   I++       LI   +       AA+ F+   + +   ++SF+ 
Sbjct: 28  LSHLKIIHAHLIRAHTIFDVF-AASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIR 86

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            + S   +  +    + +    G++  +     ++K CT+  +  +G++ H  +I+ GFD
Sbjct: 87  GF-SGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFD 145

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDL---------------------------- 358
            DV+++ +L+  Y    D++SA+ +F  +S L                            
Sbjct: 146 SDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKM 205

Query: 359 -EDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            E +L+ W+ +I    +N  ++ AI+L+  +Q     A    +V ++ +CA +GA   G+
Sbjct: 206 PEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGE 265

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           + H Y+L++ +  NL +   L+ MY+R   ++ A  VFD +   +  SW ++I+ +   G
Sbjct: 266 RAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHG 325

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           Y + A   F++M  + + P  IT+  +LS     G  +  L L   M+
Sbjct: 326 YAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMK 373


>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
          Length = 613

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/655 (34%), Positives = 357/655 (54%), Gaps = 52/655 (7%)

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT-GLGYVDVA 481
            L SA     S+    ++   R   L  A   F S      +++N +++ Y   LG +  A
Sbjct: 9    LASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADA 68

Query: 482  WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
              LF+++ +    PD +++N LLS HF  G       L   M                  
Sbjct: 69   RHLFDRIPT----PDAVSYNTLLSCHFASGDADGARRLFASMP----------------- 107

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                             +R+ + ++     +++    K+  ++ A+ VF  M  RN V+W
Sbjct: 108  -----------------VRDVVSWN-----TMVSGLSKSGAVEEAKAVFLAMPVRNSVSW 145

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            N+++SG+        A++      E   K D V W ++VSGY   G   +A+     M  
Sbjct: 146  NAMVSGFACSRDMSAAEEWFRNAPE---KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMP- 201

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQ 720
                 N+V+W ++++G ++N +  ++L+ F  M +E +++PN++T+SS+L  C  L  L 
Sbjct: 202  ---VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALG 258

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             GK+IH  C+K    ++  V T L+ MY K G+L SA ++F +   + + +WN MI G+A
Sbjct: 259  FGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYA 318

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
             +G+GKEAI LF  + + G +P+ ITF A+L AC ++GL + G + F+ M   Y I P +
Sbjct: 319  QHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRV 378

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            +HYSCMVDLL +AG L+ A D IR+MPF+P  + +G LL +CR++ +LE+AE+A+ +L +
Sbjct: 379  DHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIE 438

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
             +P ++  Y  + N+ A +N+W+DV R+R  M +  V     +SWI+I  ++H F +   
Sbjct: 439  KDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDR 498

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP    I+ +L  L   MK +GYVPD   V  D+DE  K ++L+ H+EKLAI +GL+ T
Sbjct: 499  LHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLIST 558

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                 +R+ KN RVC DCH AAK +S +  REI LRD  RFHHFR G CSC D W
Sbjct: 559  APGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 178/387 (45%), Gaps = 25/387 (6%)

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           C L  +      +  A  LF  +    D + +N ++     +   + A +LF  M     
Sbjct: 53  CLLAGYARALGRLADARHLFDRIPT-PDAVSYNTLLSCHFASGDADGARRLFASMPV--- 108

Query: 393 KAISRTIVK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               R +V    M+   +K GA  E K +    L   + +++S  N ++S ++ +  +  
Sbjct: 109 ----RDVVSWNTMVSGLSKSGAVEEAKAV---FLAMPVRNSVSW-NAMVSGFACSRDMSA 160

Query: 450 ATRVF-DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           A   F ++ +  +   W +M+S Y  +G V  A   F  M       ++++WN +++G+ 
Sbjct: 161 AEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVR----NLVSWNAVVAGYV 216

Query: 509 THGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
            +    + L L R M +    +PN S++S VL   + L  L +G++ H + ++  L  +L
Sbjct: 217 KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNL 276

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            VGTSL+ MY K   L +A ++F  M  R++VAWN++ISGY   G    A  +  +M++E
Sbjct: 277 TVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDE 336

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRE 686
            ++P+ +++ ++++     G     +     M+   GI P V  ++ ++    +      
Sbjct: 337 GVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 396

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           ++     M  E   P+ +   +LL  C
Sbjct: 397 AVDLIRSMPFE---PHPSAYGTLLAAC 420



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 6/255 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y++ G+   A + F     R+   W++ +  Y         L      +    V 
Sbjct: 179 AMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQ 238

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +  L+ +L  C+ L A   G ++H   +K     ++ +  +L++ Y KC D+ SA KL
Sbjct: 239 PNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKL 298

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+    D + WN +I    ++   + AI LF  M+    +    T V +L AC   G 
Sbjct: 299 FGEMH-TRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 357

Query: 412 FHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
              G +   G      +E  +   +C++ +  R  KLE A  +  SM  + + S++ +++
Sbjct: 358 CDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLL 417

Query: 470 SS---YTGLGYVDVA 481
           ++   Y  L + ++A
Sbjct: 418 AACRVYKNLEFAELA 432


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 254/895 (28%), Positives = 431/895 (48%), Gaps = 72/895 (8%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            H  ++K+G +  SD  V + + H Y  +G    A K F     ++   W++ +  Y  +G
Sbjct: 53   HGFIVKVGLL--SDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYG 110

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             E   ++ ++  +  +G+      ++ ++  C  L    LG +V   +IK G + +V + 
Sbjct: 111  -EPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVA 169

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             +L++ +G    VE A  +FS + D  D + WN +I   +RN   + +++ F  M     
Sbjct: 170  NSLISMFGYFGSVEEACYVFSGM-DEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHK 228

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +  S T+  ML  C  V     G+ IH  VLK    SN+   N LI+M            
Sbjct: 229  EINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITM------------ 276

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
                               Y+  G  + A  +F  M    ++ D+I+WN +++ +   G+
Sbjct: 277  -------------------YSDAGRCEDAELVFQGM----VEKDMISWNSMMACYAQDGN 313

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
              + L LL  M  +    N  + +  L A ++      G+  H  ++  GL  ++ VG +
Sbjct: 314  CLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNA 373

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+ +Y K+  +  A++VF  M  R+ V WN+LI G+        A K    M EE +  +
Sbjct: 374  LVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPIN 433

Query: 633  LVSWNSLVSGYSI------WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN--- 683
             ++ ++++            G    A +I+   ++     N +       G L + N   
Sbjct: 434  YITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIF 493

Query: 684  -----------------------YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                                     E+LKF ++M++  +  +  + S  L     L +L+
Sbjct: 494  DRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILE 553

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             G+++H L +K G   + +VA+  +DMY K G +     +  +  N++  SWN +   F+
Sbjct: 554  EGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFS 613

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
             +G  ++A   FHE++  G +PD +TF +LL+AC + G+VEEG  Y+DSM  ++ I   I
Sbjct: 614  RHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKI 673

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
             H  C++DLLG++G   EA  FI+ MP  P   +W +LL +C+ HG+LE    A   L K
Sbjct: 674  GHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLK 733

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            L+P + + Y L  N+ A + +WEDVE++R  M    +K     SW+++   + +F     
Sbjct: 734  LDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDH 793

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP   EIY +L  L   +K+ GY+PD     QD DEE+K   L +H+E+LA+ YGL+ +
Sbjct: 794  SHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISS 853

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               + +++ KN RVC DCH+  K+ S + GR+I LRD  RFH F  G+CSC D W
Sbjct: 854  PEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 161/659 (24%), Positives = 291/659 (44%), Gaps = 81/659 (12%)

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWL---GVEVHASLIKRGFDFD 328
            G  +E +  + E+   GV      +  ++  C +  + W+   GV+VH  ++K G   D
Sbjct: 7   AGSYRESMRFFNEMRDFGVKPSGIAVASLVTACER--SEWMLIEGVQVHGFIVKVGLLSD 64

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V +  +L++ YG       A K+F E+   ++ + W  +++  +   +    + ++R M+
Sbjct: 65  VFVGTSLVHLYGNYGLAADAMKVFQEMI-YKNVVSWTALMVAYVDYGEPSMVMNIYRRMR 123

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                    T+  ++  C  +     G Q+ G+V+K  LE+N+SV N             
Sbjct: 124 SEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVAN------------- 170

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
                             S+IS +   G V+ A  +F+ M+    + D I+WN +++ + 
Sbjct: 171 ------------------SLISMFGYFGSVEEACYVFSGMD----EHDTISWNSMIAAYI 208

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            +G  +  L     M  +    N +++S +L     +  LK+GR  H  +L+ G + ++ 
Sbjct: 209 RNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVC 268

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
              +L+ MY      ++A+ VF  M  +++++WNS+++ Y   G  ++A K+L  M    
Sbjct: 269 ASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMR 328

Query: 629 IKPDLVSWNSLVSG-----YSIWGQSKEALVIIHHMKNSGIYPNV--------------- 668
              + V++ S ++      ++  G+   ALVI   +  + I  N                
Sbjct: 329 RGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAK 388

Query: 669 -----------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC-GGL 716
                      VTW +LI G   +E   E+LK F  M++E +  N  T+S++L  C    
Sbjct: 389 KVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPN 448

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
            LL++G  IH   +  GF  D YV   LI MY+K G+L S+  +F +  +K  ++WN M+
Sbjct: 449 DLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMM 508

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD---SMSTD 833
              A +G+ +EA+    E+   G   D  +F+  LAA     ++EEG +       +  D
Sbjct: 509 AANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCD 568

Query: 834 YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
            N  P +   S  +D+ GK G +D+    I   P       W  L  S   HG  E A+
Sbjct: 569 SN--PFVA--SATMDMYGKCGEIDDVLRII-PRPINRSRLSWNILTSSFSRHGFFEKAK 622



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 227/489 (46%), Gaps = 55/489 (11%)

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR-LLKYGRESHGYILRNG 562
           +SG    GSY+  +     M+  G +P+G +V+ ++ A      +L  G + HG+I++ G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC------------- 609
           L  D++VGTSL+ +Y       +A +VF  M  +N+V+W +L+  Y              
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 610 ---FKGLFVNAKKM-------------------LNQMEEEEIKPDLVSWNSLVSGYSIWG 647
               +G+  N   M                   L  + +  ++ ++   NSL+S +  +G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             +EA  +   M       + ++W S+I+  ++N   +ESL+ F  M +   + NSTT+S
Sbjct: 181 SVEEACYVFSGMDEH----DTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLS 236

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           ++L  CG +  L+ G+ IH L LK G+  +   +  LI MYS +G  + A  VF+    K
Sbjct: 237 TMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEK 296

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
            + SWN M+  +A  GN  +A+ L   +       + +TFT+ LAAC +     EG K  
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEG-KIL 355

Query: 828 DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            ++     +   +   + +V L  K+G + EA    +TMP K D   W AL+G     GH
Sbjct: 356 HALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIG-----GH 409

Query: 888 LEYAEI-ASRRLFKL--EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            +  E   + + FKL  E     NY  + N+L       D+  L H M    + + ++ +
Sbjct: 410 ADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDL--LEHGMP---IHAFIILT 464

Query: 945 WIQIDQIVH 953
             Q D+ V 
Sbjct: 465 GFQSDEYVQ 473


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/775 (29%), Positives = 382/775 (49%), Gaps = 76/775 (9%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM--QFSSA 392
            +++ Y    D+ +A  LF   S   +   W  ++       +  +A+ LFR M  +    
Sbjct: 80   ILSAYSSSGDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIP 138

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
              ++ T V  L  C           +H + +K  L++++ VCN L+  Y ++  L  A R
Sbjct: 139  DRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARR 191

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            VF  M D                                    D +T+N ++ G    G 
Sbjct: 192  VFLEMHDK-----------------------------------DAVTYNAMMMGCSKEGL 216

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            +   L L   M+  G      + S +L     +  L  G + H  +LR+    +++V  S
Sbjct: 217  HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+D Y K DCL + + +FD M  R+ V++N +I+ Y +        ++  +M++      
Sbjct: 277  LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 633  LVSWNSLVS----------GYSIWGQ------SKEALV---IIHHMKNSGIY-------- 665
            ++ + +++S          G  I  Q      + E L+   +I      G+         
Sbjct: 337  VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396

Query: 666  ----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 + ++WT+LI+G +QN  + E+L+ F  M++  ++P+  T SS+++    L ++  
Sbjct: 397  NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 456

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            G+++H   +++G+    +  + L+DMY+K G L  A   F +   +   SWN +I  +A 
Sbjct: 457  GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 516

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            YG  K AI +F  +L  GF PD++TF ++LAAC ++GL +E  KYF  M   Y+I P  E
Sbjct: 517  YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 576

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+C++D LG+ G   +    +  MPFK D  IW ++L SCRIHG+ E A +A+ +LF +
Sbjct: 577  HYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 636

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            EP ++  Y ++ N+ A + +WED   ++  M + GV+    +SW++I Q ++ F++    
Sbjct: 637  EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
             P   EI  EL  L  EM K GY PD  C    +D E K + L  H+E+LAI + LM T 
Sbjct: 697  SPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTP 756

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCWQ 1076
            +  PIR++KN   C DCH   K +S +  R+I +RD  RFHHF++G CSC D W+
Sbjct: 757  AGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYWE 811



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 142/615 (23%), Positives = 264/615 (42%), Gaps = 65/615 (10%)

Query: 209 SVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           +V S H   IK G +     +  +L+  Y + G   +A + F     +    +++ +   
Sbjct: 153 TVPSLHPFAIKFG-LDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGC 211

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
              G   Q L +++  +   G+       + IL +   +    LG +VHA +++     +
Sbjct: 212 SKEGLHTQAL-QLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLN 270

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V +  +L++FY KC  ++   +LF E+ +  D++ +N II     N+     ++LFREMQ
Sbjct: 271 VFVNNSLLDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYAWNQCAATVLRLFREMQ 329

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                        ML     +   H GKQIH  ++   L S   + N LI MYS+   L+
Sbjct: 330 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 389

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A   F +  + +  SW ++I+ Y   G  + A  LF+ M  + ++PD  T+        
Sbjct: 390 AAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATF-------- 441

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                                      S +++A + L ++  GR+ H Y++R+G    ++
Sbjct: 442 ---------------------------SSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 474

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            G+ L+DMY K  CL  A   FD M  RN ++WN++IS Y   G   NA KM   M    
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG 534

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRES 687
             PD V++ S+++  S  G + E +   H MK+   I P    +  +I    +   + + 
Sbjct: 535 FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQV 594

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI-- 745
            K  ++M     K +    +S+L +C     +   +E+  +     F  +   AT  +  
Sbjct: 595 QKMLVEMP---FKADPIIWTSILHSC----RIHGNQELARVAADKLFGMEPTDATPYVIL 647

Query: 746 -DMYSKSGNLKSA---REVFRKSANKTLASWNCMIMGFAIYGNGK-------------EA 788
            ++Y+++G  + A   +++ R    +  + ++ + +   IY                 E 
Sbjct: 648 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDEL 707

Query: 789 ILLFHELLETGFQPD 803
             L+ E+ + G++PD
Sbjct: 708 DRLYKEMDKQGYKPD 722



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 210/480 (43%), Gaps = 50/480 (10%)

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           L  A  +FD M   N+ S N ++S+Y+  G +  A  LF     S    +  TW  ++  
Sbjct: 59  LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIMMRA 114

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ----AVTELRLLKYGRESHGYILRNG 562
           H   G   + L+L R M   G  P+  +V+ VL      V  L         H + ++ G
Sbjct: 115 HAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL---------HPFAIKFG 165

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           LD  ++V  +L+D Y K+  L  A+ VF  M +++ V +N+++ G   +GL   A ++  
Sbjct: 166 LDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFA 225

Query: 623 QMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALVI---------------------- 655
            M    I     +++S+++      + + G    ALV+                      
Sbjct: 226 AMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCD 285

Query: 656 ----IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
               +  + +     + V++  +I+    N+     L+ F +MQ+          +++L 
Sbjct: 286 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 345

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             G L  +  GK+IH   +  G   +  +   LIDMYSK G L +A+  F   + K+  S
Sbjct: 346 VAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAIS 405

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
           W  +I G+   G  +EA+ LF ++   G +PD  TF++++ A  +  ++  G +   S  
Sbjct: 406 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLG-RQLHSYL 464

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
                  ++   S +VD+  K G LDEA      MP + ++  W A++ +   +G  + A
Sbjct: 465 IRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSISWNAVISAYAHYGEAKNA 523


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/575 (37%), Positives = 333/575 (57%), Gaps = 37/575 (6%)

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            +++L      R ++ G+  H ++++      +Y+ T L+ +Y K +CL  A+ VFD M+ 
Sbjct: 14   NMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRE 73

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---GYS-------- 644
            RN+V+W ++ISGY  +G    A  +  QM   + +P+  ++ +++S   G+S        
Sbjct: 74   RNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQI 133

Query: 645  ---IWGQSKEALVI--------------IHHMKNSGIYP-----NVVTWTSLISGSLQNE 682
               I+ ++ E  +               IH  +  G++      +VV+ T++ISG  Q  
Sbjct: 134  HSHIFKRNYENHIFVGSSLLDMYAKAGRIHEAR--GVFECLPERDVVSCTAIISGYAQLG 191

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               E+L+ F ++Q+E +  N  T +SLL    GL  L +GK++H   L+        +  
Sbjct: 192  LDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN 251

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQ 801
             LIDMYSK GNL  AR++F     +T+ SWN M++G++ +G G E + LF  + E    +
Sbjct: 252  SLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVK 311

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT-IEHYSCMVDLLGKAGYLDEAW 860
            PD++TF A+L+ C + GL ++G + FD M    + I   IEHY C++DLLG+AG ++EA+
Sbjct: 312  PDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAF 371

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            + I+ MPF+P A IWG+LLG+CR+H +    E    RL ++EP N+ NY ++ NL A + 
Sbjct: 372  ELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAG 431

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RWEDV  +R  M E  V      SWI++DQ +H F A    HP   E++ ++  L+ + K
Sbjct: 432  RWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFK 491

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            + GYVPD  CV  D+DEE+K K+LL H+EKLA+ +GL+ T    P+RVIKN R+C DCH 
Sbjct: 492  ESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHN 551

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             AK++S V GR++ +RD  RFHH   G CSC D W
Sbjct: 552  FAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 192/418 (45%), Gaps = 42/418 (10%)

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
           ++L  C    A   G  VHA +IK  +   V+L   L+  Y KC  +  A  +F E+ + 
Sbjct: 15  MLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRE- 73

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            + + W  +I    +      A+ LF +M  S  +    T   +L +C     F  G+QI
Sbjct: 74  RNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQI 133

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H ++ K   E+++ V + L+ MY++  ++  A  VF+ + + ++ S  ++IS Y  LG  
Sbjct: 134 HSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLD 193

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
           + A  LF ++    +  + +T             Y ++LT L G+ +             
Sbjct: 194 EEALELFCRLQREGMSSNYVT-------------YASLLTALSGLAA------------- 227

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
                    L +G++ H ++LR  L + + +  SL+DMY K   L  A+++F+NM  R +
Sbjct: 228 ---------LDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTV 278

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           ++WN+++ GY   G  +   K+   M EE ++KPD V++ +++SG S  G   + L +  
Sbjct: 279 ISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFD 338

Query: 658 HMKNSG--IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            M N G  I   +  +  +I    +     E+ +   +M  E   P +    SLL  C
Sbjct: 339 EMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFE---PTAAIWGSLLGAC 393



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 179/422 (42%), Gaps = 78/422 (18%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L  C    A  EG+++H +++K+     + +   LI +Y++   L  A  VFD M++ N
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                              +++W  ++SG+   G     L L  
Sbjct: 76  -----------------------------------VVSWTAMISGYSQRGFASEALHLFV 100

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M      PN  + + VL + T     + GR+ H +I +   +  ++VG+SL+DMY K  
Sbjct: 101 QMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAG 160

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----- 636
            +  A+ VF+ +  R++V+  ++ISGY   GL   A ++  +++ E +  + V++     
Sbjct: 161 RIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLT 220

Query: 637 ------------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                                         NSL+  YS  G    A  I ++M       
Sbjct: 221 ALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMP----VR 276

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            V++W +++ G  ++    E +K F  M++E+ +KP+S T  ++L  C   GL   G E+
Sbjct: 277 TVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEM 336

Query: 726 HCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIY 782
               +  G   +A +     +ID+  ++G ++ A E+ +K     T A W  ++    ++
Sbjct: 337 FDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH 396

Query: 783 GN 784
            N
Sbjct: 397 SN 398



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 3/176 (1%)

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
           + +Q  +IK +   M  LL  C     ++ G+ +H   +K  ++   Y++T LI +Y+K 
Sbjct: 1   MAIQGPEIKFDGYNM--LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKC 58

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
             L  AR VF +   + + SW  MI G++  G   EA+ LF ++L +  +P+  TF  +L
Sbjct: 59  ECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVL 118

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
           ++C      E G +   S     N    I   S ++D+  KAG + EA      +P
Sbjct: 119 SSCTGFSGFELG-RQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 112/244 (45%), Gaps = 6/244 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G    A   F     R     ++ +  Y   G + +E LE++  L  +G+ 
Sbjct: 151 SLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLD-EEALELFCRLQREGMS 209

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L   + L A   G +VH+ +++    F V L+ +L++ Y KC ++  A K+
Sbjct: 210 SNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKI 269

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVG 410
           F+ +  +   + WN +++   ++ K    +KLF+ M + +  K  S T + +L  C+  G
Sbjct: 270 FNNMP-VRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGG 328

Query: 411 AFHEGKQIHGYVLKSA--LESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNS 467
              +G ++   ++     +E+ +    C+I +  R  ++E A  +   M  +   + W S
Sbjct: 329 LEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGS 388

Query: 468 MISS 471
           ++ +
Sbjct: 389 LLGA 392


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/698 (32%), Positives = 365/698 (52%), Gaps = 73/698 (10%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            E+A+  +  M    A   + T   +L+A A+  +    + +H +V+K  +  N  V   L
Sbjct: 25   EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
            ++ Y+       A  +    +      WN++IS +        A   F  M  +   P  
Sbjct: 85   VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            +T+  +LS        +    +L GMQ                              HG 
Sbjct: 145  VTYVSVLSA-----CGKGTGDVLLGMQV-----------------------------HGR 170

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
            ++ +G+  DL V  +L+DMY +   +++A ++FD M+ R++V                  
Sbjct: 171  VVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVV------------------ 212

Query: 618  KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                             SW SL+SG +  G+  EA  +   M       + V+WT++I G
Sbjct: 213  -----------------SWTSLLSGLTRLGRVDEARDLFGRMPER----DTVSWTAMIDG 251

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             +Q   +RE+L+ F +MQ  ++  +  TM S++  C  LG L+ G+ +     + G   D
Sbjct: 252  YVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMD 311

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            A+V   LIDMYSK G+++ A +VF+   ++   +W  +I+G A+ G G+EAI +FH ++ 
Sbjct: 312  AFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIG 371

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
                PD +TF  +L AC ++GLV++G ++F SM   YNI P + HY C++DL G+AG + 
Sbjct: 372  VSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKIT 431

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA D I  MP  P++TIWG LL +CR+HG+ E  E+ + RL +++P NS  Y L+ N+ A
Sbjct: 432  EALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYA 491

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
              NRWEDV RLRH++ E G+K     S I+++ I+H F A    HP + EIY +L  +++
Sbjct: 492  KCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIIN 551

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            ++  +GY PD   V+ ++ EEEK KVL  H+EKLAI + L+ ++    IR++KN R+C D
Sbjct: 552  DLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLD 611

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH A K +S + GRE+ +RD  RFHHFR G CSC D W
Sbjct: 612  CHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 193/400 (48%), Gaps = 10/400 (2%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VHA ++K G   + H+  +L+  Y    D  +A  L SE  + +  ++WN +I    R  
Sbjct: 65  VHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSE-RERDTPVVWNALISGHNRCR 123

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAK-VGAFHEGKQIHGYVLKSALESNLSVC 434
           ++  A   F +M  + A     T V +L AC K  G    G Q+HG V+ S +  +L V 
Sbjct: 124 RFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVE 183

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L+ MY+    +E A ++FD M+  ++ SW S++S  T LG VD A  LF +M     +
Sbjct: 184 NALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMP----E 239

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            D ++W  ++ G+     ++  L + R MQ      +  ++  V+ A  +L  L+ G   
Sbjct: 240 RDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWV 299

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
             Y+ R G+  D +VG +L+DMY K   ++ A +VF +M +R+   W ++I G    G  
Sbjct: 300 RVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYG 359

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTS 673
             A +M ++M      PD V++  +++  +  G   +       M+ +  I PNVV +  
Sbjct: 360 EEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGC 419

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +I    +     E+L    QM    + PNST   +LL  C
Sbjct: 420 IIDLFGRAGKITEALDAIDQMP---MTPNSTIWGTLLAAC 456



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 30/225 (13%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS------------------ 353
           LG++VH  ++  G   D+ ++ AL++ Y +C D+ESA KLF                   
Sbjct: 163 LGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLT 222

Query: 354 ------EVSDL------EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
                 E  DL       D + W  +I   ++  ++  A+++FREMQ S+  A   T+V 
Sbjct: 223 RLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVS 282

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           ++ ACA++GA   G+ +  Y+ +  ++ +  V N LI MYS+   +E A  VF  M   +
Sbjct: 283 VITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRD 342

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             +W ++I      GY + A  +F++M      PD +T+  +L+ 
Sbjct: 343 KFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTA 387


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/774 (29%), Positives = 381/774 (49%), Gaps = 76/774 (9%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM--QFSSA 392
            +++ Y    D+ +A  LF   S   +   W  ++       +  +A+ LFR M  +    
Sbjct: 80   ILSAYSSSGDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIP 138

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
              ++ T V  L  C           +H + +K  L++++ VCN L+  Y ++  L  A R
Sbjct: 139  DRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARR 191

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            VF  M D                                    D +T+N ++ G    G 
Sbjct: 192  VFLEMHD-----------------------------------KDAVTYNAMMMGCSKEGL 216

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            +   L L   M+  G      + S +L     +  L  G + H  +LR+    +++V  S
Sbjct: 217  HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+D Y K DCL + + +FD M  R+ V++N +I+ Y +        ++  +M++      
Sbjct: 277  LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 633  LVSWNSLVS----------GYSIWGQ------SKEALV---IIHHMKNSGIY-------- 665
            ++ + +++S          G  I  Q      + E L+   +I      G+         
Sbjct: 337  VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396

Query: 666  ----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 + ++WT+LI+G +QN  + E+L+ F  M++  ++P+  T SS+++    L ++  
Sbjct: 397  NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 456

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            G+++H   +++G+    +  + L+DMY+K G L  A   F +   +   SWN +I  +A 
Sbjct: 457  GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 516

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            YG  K AI +F  +L  GF PD++TF ++LAAC ++GL +E  KYF  M   Y+I P  E
Sbjct: 517  YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 576

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+C++D LG+ G   +    +  MPFK D  IW ++L SCRIHG+ E A +A+ +LF +
Sbjct: 577  HYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 636

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            EP ++  Y ++ N+ A + +WED   ++  M + GV+    +SW++I Q ++ F++    
Sbjct: 637  EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
             P   EI  EL  L  EM K GY PD  C    +D E K + L  H+E+LAI + LM T 
Sbjct: 697  SPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTP 756

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +  PIR++KN   C DCH   K +S +  R+I +RD  RFHHF++G CSC D W
Sbjct: 757  AGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 142/615 (23%), Positives = 264/615 (42%), Gaps = 65/615 (10%)

Query: 209 SVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           +V S H   IK G +     +  +L+  Y + G   +A + F     +    +++ +   
Sbjct: 153 TVPSLHPFAIKFG-LDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGC 211

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
              G   Q L +++  +   G+       + IL +   +    LG +VHA +++     +
Sbjct: 212 SKEGLHTQAL-QLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLN 270

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V +  +L++FY KC  ++   +LF E+ +  D++ +N II     N+     ++LFREMQ
Sbjct: 271 VFVNNSLLDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYAWNQCAATVLRLFREMQ 329

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                        ML     +   H GKQIH  ++   L S   + N LI MYS+   L+
Sbjct: 330 KLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLD 389

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A   F +  + +  SW ++I+ Y   G  + A  LF+ M  + ++PD  T+        
Sbjct: 390 AAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATF-------- 441

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                                      S +++A + L ++  GR+ H Y++R+G    ++
Sbjct: 442 ---------------------------SSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 474

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            G+ L+DMY K  CL  A   FD M  RN ++WN++IS Y   G   NA KM   M    
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCG 534

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRES 687
             PD V++ S+++  S  G + E +   H MK+   I P    +  +I    +   + + 
Sbjct: 535 FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQV 594

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI-- 745
            K  ++M     K +    +S+L +C     +   +E+  +     F  +   AT  +  
Sbjct: 595 QKMLVEMP---FKADPIIWTSILHSCR----IHGNQELARVAADKLFGMEPTDATPYVIL 647

Query: 746 -DMYSKSGNLKSA---REVFRKSANKTLASWNCMIMGFAIYGNGK-------------EA 788
            ++Y+++G  + A   +++ R    +  + ++ + +   IY                 E 
Sbjct: 648 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDEL 707

Query: 789 ILLFHELLETGFQPD 803
             L+ E+ + G++PD
Sbjct: 708 DRLYKEMDKQGYKPD 722



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 212/480 (44%), Gaps = 50/480 (10%)

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           L  A  +FD M   N+ S N ++S+Y+  G +  A  LF     S    +  TW  ++  
Sbjct: 59  LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIMMRA 114

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ----AVTELRLLKYGRESHGYILRNG 562
           H   G   + L+L R M   G  P+  +V+ VL      V  L         H + ++ G
Sbjct: 115 HAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL---------HPFAIKFG 165

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           LD  ++V  +L+D Y K+  L  A+ VF  M +++ V +N+++ G   +GL   A ++  
Sbjct: 166 LDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFA 225

Query: 623 QMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALV-----IIHHMKNSGIYP------ 666
            M    I     +++S+++      + + G    ALV     +++   N+ +        
Sbjct: 226 AMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCD 285

Query: 667 ---------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
                          + V++  +I+    N+     L+ F +MQ+          +++L 
Sbjct: 286 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 345

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             G L  +  GK+IH   +  G   +  +   LIDMYSK G L +A+  F   + K+  S
Sbjct: 346 VAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAIS 405

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
           W  +I G+   G  +EA+ LF ++   G +PD  TF++++ A  +  ++  G +   S  
Sbjct: 406 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLG-RQLHSYL 464

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
                  ++   S +VD+  K G LDEA      MP + ++  W A++ +   +G  + A
Sbjct: 465 IRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSISWNAVISAYAHYGEAKNA 523


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/611 (34%), Positives = 335/611 (54%), Gaps = 39/611 (6%)

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
            +N ++ G  +   + N + L   M      P+  + S VL+A   L L   G   H  + 
Sbjct: 72   YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            + G D D++V T+++  Y K   L++A +VFD+M  +N+V+W  +I G    G F  A  
Sbjct: 132  KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191

Query: 620  MLNQMEEEEIKPD-----------------------------------LVSWNSLVSGYS 644
            +   + E  ++PD                                   +    SLV  Y+
Sbjct: 192  LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYT 251

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G  +EA  +   M    +  ++V W+++I G   N   RE+++ F +M++ +++P+  
Sbjct: 252  KCGSMEEARFVFDGM----VEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCY 307

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
             M   L +C  LG L+ G     L     F+ +  + T LID Y+K G+++ A  V++  
Sbjct: 308  AMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMM 367

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K    +N +I G A+YG    A  +F ++ + G  P+  TF  LL  C ++GLV++G 
Sbjct: 368  KEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR 427

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
             YF+SMS D+++ PTIEHY CMVDLL +AG+LDEA + I+ MP K +  +WG+LLG CR+
Sbjct: 428  HYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRL 487

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H   + AE   ++L +LEP NS +Y L+ N+ + S RW++ E++R +++E G++ +  +S
Sbjct: 488  HRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYS 547

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            W+++D +VH F      HP + +IY +L  L  ++K+ GY P T  V  D++EEEK   L
Sbjct: 548  WVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFL 607

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+EKLA+ + L+ T ++  IRV+KN RVC DCH A K++S V GREI +RD  RFH F
Sbjct: 608  GCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCF 667

Query: 1065 REGECSCNDCW 1075
             +G CSC D W
Sbjct: 668  SDGACSCRDYW 678



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 208/457 (45%), Gaps = 53/457 (11%)

Query: 190 CISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKA 249
           CI+SG          +CL   K  H +++++  + + +D++  ++   +   +F++ A+ 
Sbjct: 9   CIASGL---------KCLKHAKLAHCRLLRL-NLHHDNDLLSIILRSTI---NFSNNAQY 55

Query: 250 FFLYFSRSYADWSSFLEDYESFG----GEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
             L F ++  + ++FL +    G          + ++  +H   ++  S   + +LK C 
Sbjct: 56  PILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACA 115

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
           +L  F LGV +H+ + K GFD DV +K  ++ FY KC  +  A K+F ++  +++ + W 
Sbjct: 116 RLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMV-VKNVVSWT 174

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I   +   K+  A+ LFR +  S  +     IV++L+ACA++G    G+ I   + + 
Sbjct: 175 GMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMREC 234

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
            L  N+ V   L+ MY++   +E A  VFD M + ++  W++MI  Y   G    A  LF
Sbjct: 235 GLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELF 294

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
            +M    ++PD                                     ++   L +   L
Sbjct: 295 FEMRKVNVRPDCY-----------------------------------AMVGALSSCASL 319

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
             L+ G  + G +       +  +GTSL+D Y K   ++ A  V+  MK ++ V +N++I
Sbjct: 320 GALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVI 379

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           SG    G    A  +  QM +  I P+  ++  L+ G
Sbjct: 380 SGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCG 416



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 207/489 (42%), Gaps = 86/489 (17%)

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F +     +  L+N +I   +  +++ NA+ L+  M  ++    S T   +L+ACA++ 
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
            FH G  IH  V K+  + ++ V   ++  YS+                           
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSK--------------------------- 151

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
                G++  AW +F+ M    +  ++++W  ++ G    G ++  + L RG+   G RP
Sbjct: 152 ----CGFLRDAWKVFDDM----VVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRP 203

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           +G  +  VL+A   L  L+ GR     +   GL  +++V TSL+DMY K   ++ A+ VF
Sbjct: 204 DGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVF 263

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------------------ 632
           D M  ++IV W+++I GY   GL   A ++  +M +  ++PD                  
Sbjct: 264 DGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALE 323

Query: 633 LVSW-----------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
           L +W                  SL+  Y+  G  +EAL +   MK      + V + ++I
Sbjct: 324 LGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEK----DRVVFNAVI 379

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
           SG         +   F QM +  I PN  T   LL  C   GL+ +G+        N   
Sbjct: 380 SGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYF-----NSMS 434

Query: 736 KDAYVATG------LIDMYSKSGNLKSAREVFRKSANKT-LASWNCMIMGFAIYGNGKEA 788
            D  V         ++D+ +++G L  A  + +    K  +  W  ++ G  ++   + A
Sbjct: 435 HDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLA 494

Query: 789 ILLFHELLE 797
             +  +L+E
Sbjct: 495 EHVLKQLIE 503



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 53/389 (13%)

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN--DCLQNAQE---VFDNM-KNRNI 598
           L+ LK+ + +H  +LR  L +D      L+ + +++  +   NAQ    VF     N N 
Sbjct: 14  LKCLKHAKLAHCRLLRLNLHHD----NDLLSIILRSTINFSNNAQYPILVFHKTPTNSNT 69

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN--------------------- 637
             +N++I G   K  F NA  +   M +  I PD  +++                     
Sbjct: 70  FLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSL 129

Query: 638 --------------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                         ++V  YS  G  ++A  +   M    +  NVV+WT +I G ++   
Sbjct: 130 VFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDM----VVKNVVSWTGMICGCIEFGK 185

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
           +RE++  F  + +  ++P+   +  +L+ C  LG L++G+ I     + G  ++ +VAT 
Sbjct: 186 FREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATS 245

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           L+DMY+K G+++ AR VF     K +  W+ MI G+A  G  +EAI LF E+ +   +PD
Sbjct: 246 LVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPD 305

Query: 804 AITFTALLAACKNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
                  L++C + G +E G W        ++   P +   + ++D   K G ++EA   
Sbjct: 306 CYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG--TSLIDFYAKCGSMEEALGV 363

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            + M  K D  ++ A++    ++G +  A
Sbjct: 364 YKMMKEK-DRVVFNAVISGLAMYGQVGAA 391



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 117/314 (37%), Gaps = 62/314 (19%)

Query: 715 GLGLLQNGKEIHCLCLKNGFIKD-AYVATGLIDMYSKSGNLKSAREVFRKS-ANKTLASW 772
           GL  L++ K  HC  L+     D   ++  L    + S N +    VF K+  N     +
Sbjct: 13  GLKCLKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLY 72

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC------------------ 814
           N MI G         A+ L+  + +    PD+ TF+ +L AC                  
Sbjct: 73  NTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFK 132

Query: 815 -----------------KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
                               G + + WK FD M     ++  +  ++ M+    + G   
Sbjct: 133 TGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDM-----VVKNVVSWTGMICGCIEFGKFR 187

Query: 858 EAWDFIRTM---PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN-SANYNLMM 913
           EA D  R +     +PD  +   +L +C   G LE      R    +  C  S N  +  
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDR---CMRECGLSRNVFVAT 244

Query: 914 NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
           +L+ M  +   +E  R   D +  K ++ WS      ++  +++ G P  A  E++F   
Sbjct: 245 SLVDMYTKCGSMEEARFVFDGMVEKDIVCWS-----AMIQGYASNGLPREAI-ELFF--- 295

Query: 974 HLVSEMKKLGYVPD 987
               EM+K+   PD
Sbjct: 296 ----EMRKVNVRPD 305


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/639 (34%), Positives = 349/639 (54%), Gaps = 36/639 (5%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            +I SY  LG+++ A  +F+K      Q  +  WN ++  +   G+    L+L   M S G
Sbjct: 45   LIQSYARLGHIESARQVFDKSP----QCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEG 100

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             RP+ S+ +VVL+A T    L+ G E+    +  G   D++VG +++++Y K   +  A 
Sbjct: 101  VRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAM 160

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
             VFD M  R++V W ++I+G    G    A  +  QM ++ ++ D V    L+   +  G
Sbjct: 161  RVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLG 220

Query: 648  QSKEALVIIHHMKNSGI-------------------------------YPNVVTWTSLIS 676
             SK  L I  +M    I                               Y NV++W++LIS
Sbjct: 221  HSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALIS 280

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G  QN     +L+  + MQ    KP+S ++ S+L  C  +G L+ GK +H   ++     
Sbjct: 281  GFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHF- 339

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            D   +T +IDMYSK G+L  AR VF + + +   SWN +I  + I+G+G+EA+ LF ++ 
Sbjct: 340  DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMR 399

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
            ET  +PD  TF +LL+A  +SGLVE+G  +F  M  +Y I P+ +HY+CMVDLL +AG +
Sbjct: 400  ETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRV 459

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
            +EA + I +M  +P   IW ALL  C  HG     E+A++++ +L P +   Y+L+ N  
Sbjct: 460  EEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFF 519

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A + RW++V  +R  M + G+K V  +S ++++  +H F  E   H    EI   L  L 
Sbjct: 520  ATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLD 579

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
             EMK +GYVP T  V  +++EE K ++L +H+E+LAI +GL+ T     + + KN RVC 
Sbjct: 580  YEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCG 639

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            DCH A K++S +  REI +RD  RFHHF++G CSC D W
Sbjct: 640  DCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 207/436 (47%), Gaps = 39/436 (8%)

Query: 209 SVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           ++   HA MI  G I+   +    LI  Y   G   SA + F          W++ +  Y
Sbjct: 22  TIAKIHALMILTG-IFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAY 80

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
            S  G + E L ++  +  +GV   S   T++LK CT+ +    G E     + +G+  D
Sbjct: 81  -SRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDD 139

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V +  A++N Y KC  ++ A ++F ++    D + W  +I    +N +   A+ ++R+M 
Sbjct: 140 VFVGAAVLNLYAKCGKMDEAMRVFDKMGR-RDLVCWTTMITGLAQNGQAREAVDIYRQMH 198

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
               +     ++ ++QAC  +G    G  IHGY+++  +  ++ V   L+ MY++N  LE
Sbjct: 199 KKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLE 258

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           LA+ VF  M   N+ SW+++IS +   G+   A  L   M                    
Sbjct: 259 LASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDM-------------------- 298

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                          QS G++P+  S+  VL A +++  LK G+  HGYI+R  L +D  
Sbjct: 299 ---------------QSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCV 342

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
             T+++DMY K   L  A+ VFD +  R+ ++WN++I+ Y   G    A  +  QM E  
Sbjct: 343 SSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETN 402

Query: 629 IKPDLVSWNSLVSGYS 644
           +KPD  ++ SL+S +S
Sbjct: 403 VKPDHATFASLLSAFS 418



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 8/180 (4%)

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           +IH L +  G          LI  Y++ G+++SAR+VF KS    + +WN MI+ ++  G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV---EEGWKYFDSMSTDYNIIPTI 840
              EA+ L+H +   G +PD+ T+T +L AC  S  +   EE W+     + D      +
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWR----QAVDQGYGDDV 140

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
              + +++L  K G +DEA      M  + D   W  ++     +G    A    R++ K
Sbjct: 141 FVGAAVLNLYAKCGKMDEAMRVFDKMG-RRDLVCWTTMITGLAQNGQAREAVDIYRQMHK 199


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Vitis vinifera]
          Length = 786

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/772 (30%), Positives = 383/772 (49%), Gaps = 94/772 (12%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            ++  Y     +  A KLF E + +   + W+ +I    R      A++LF EMQ+   + 
Sbjct: 78   MIGAYANSGRLNEARKLFYE-TPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERP 136

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               T   +L+ C+      +GKQIH + +K+  +SN  V   L+ MY++   +  A  +F
Sbjct: 137  NQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLF 196

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            +   D                                  + + + W  +++G+  +G   
Sbjct: 197  ELAPD----------------------------------KRNHVLWTAMVTGYSQNGDGH 222

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
              +   R M+  G   N  +   +L A   +    +G + HG I+R+G   +++VG++L+
Sbjct: 223  KAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALV 282

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            DMY K   L NA+ + + M+  + V+WNS+I G   +GL   A  +   M    +K D  
Sbjct: 283  DMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEF 342

Query: 635  SWNSLV---------------------SGYSIWGQSKEALVIIHHMKNSGIYP------- 666
            ++ S++                     +G+  +     ALV ++  +    Y        
Sbjct: 343  TYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKM 402

Query: 667  ---NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               +V++WTSL++G + N +Y E+L+ F +M+   I P+   ++++L  C  L +L+ GK
Sbjct: 403  TDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGK 462

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            ++H   LK+G      V   L+ MY+K G ++ A +VF     + + +W  +I+G+A  G
Sbjct: 463  QVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG 522

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
             G++                            ++GLVE G  YF SM   Y I P  EHY
Sbjct: 523  RGRD----------------------------HAGLVEHGRSYFQSMEEVYGIKPGPEHY 554

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +CM+DLLG++G L EA + +  M  +PDAT+W ALL +CR+HG++E  E A+  LF+LEP
Sbjct: 555  ACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEP 614

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             N+  Y L+ NL + + +WE+  + R  M   GV      SWI++   VH F +E   HP
Sbjct: 615  KNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHP 674

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
             T EIY ++  ++  +K+ GYVPD      D+DEE K   L  H+EKLA+ +GL+     
Sbjct: 675  RTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPG 734

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            APIR+ KN R+C DCHTA KY+S V  R + LRD   FHHFREG CSC+D W
Sbjct: 735  APIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/810 (29%), Positives = 409/810 (50%), Gaps = 74/810 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
            I+K+C  +    LG ++HA  ++ G D  D+ +  +L++ Y     V    K+F  +   
Sbjct: 61   IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLK- 119

Query: 359  EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
             + + W  ++   ++     + + LF  M+         T   +L   A  G    G+ +
Sbjct: 120  RNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHV 179

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            H   +K    S + VCN L++MY++                                G V
Sbjct: 180  HAQSIKFGCCSTVFVCNSLMNMYAK-------------------------------CGLV 208

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
            + A  +F +M +     D+++WN L++G   +G     L L    +S       S+ S V
Sbjct: 209  EEARVVFCRMETR----DMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTV 264

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRN 597
            +     L+ L   R+ H  +L++G      V T+LMD Y K   L  A +VF  M  ++N
Sbjct: 265  INLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQN 324

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---------------- 641
            +V+W ++I G    G    A  + ++M E+ + P+ ++++++++                
Sbjct: 325  VVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIK 384

Query: 642  ---------------GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                            YS    ++EAL I   +       +VV+W+++++   Q  +   
Sbjct: 385  TNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQK----DVVSWSAMLTCYAQAGDCNG 440

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL-LQNGKEIHCLCLKNGFIKDAYVATGLI 745
            +   FI+M    +KPN  T+SS +  C      +  G++ H + +K+       V++ L+
Sbjct: 441  ATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALV 500

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
             MY++ G++++A+ VF +  ++ L SWN M+ G+A +G  ++A+ +F ++   G   D +
Sbjct: 501  SMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGL 560

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF +++  C ++GLVEEG +YFD M  DY I PT++HY+CMVDL  +AG LDE    I  
Sbjct: 561  TFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEG 620

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MPF    TIW ALLG+CR+H ++E  ++A+ +L  LEP +SA Y L+ N+ + + +W++ 
Sbjct: 621  MPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEK 680

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
            + +R  MD   V+     SWIQI   VH F A    HP + +IY +L  + +++K+ GY 
Sbjct: 681  DEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYC 740

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            PDT  V  D+ E++K  +L  H+E+LA+ +GL+ T   AP+ + KN RV  D HT  K +
Sbjct: 741  PDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMV 800

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S +  REI +RD  RFHHF+ G CSC D W
Sbjct: 801  SEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 139/644 (21%), Positives = 262/644 (40%), Gaps = 95/644 (14%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  HA  ++ G       +  SL+  Y+ +       K F     R+   W+S L  Y  
Sbjct: 75  KQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQ 134

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G + +++ ++  +  +GV       + +L +        LG  VHA  IK G    V 
Sbjct: 135 -AGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVF 193

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  +LMN Y KC  VE A  +F  + +  D + WN ++   + N +   A++LF + + S
Sbjct: 194 VCNSLMNMYAKCGLVEEARVVFCRM-ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSS 252

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                  T   ++  CA +      +Q+H  VLK    S  +V   L+  Y++  +L+ A
Sbjct: 253 ITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKA 312

Query: 451 TRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
             VF  M    N+ SW +MI      G + +A +LF++M    + P+ +T++ +L+    
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT---- 368

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                        +    F P                      + H  +++   +    V
Sbjct: 369 -------------VSEASFPP----------------------QIHAQVIKTNYECTPTV 393

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GT+LM  Y K    + A  +F  +  +++V+W+++++ Y   G    A     +M    +
Sbjct: 394 GTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGL 453

Query: 630 KPD------------------------------------LVSWNSLVSGYSIWGQSKEAL 653
           KP+                                    L   ++LVS Y+  G  + A 
Sbjct: 454 KPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQ 513

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +     +     ++++W S++SG  Q+   +++L  F QM+ E I  +  T  S++  C
Sbjct: 514 CVFERQTDR----DLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGC 569

Query: 714 GGLGLLQNGKEIHCLCLKNGFIK---DAYVATGLIDMYSKSGNLKSAREVFRK---SANK 767
              GL++ G++   L +++  I    D Y    ++D+YS++G L     +       A  
Sbjct: 570 AHAGLVEEGQQYFDLMVRDYGITPTMDHYAC--MVDLYSRAGKLDETMSLIEGMPFPAGP 627

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP-DAITFTAL 810
           T+  W  ++    ++ N +   L   +LL    +P D+ T+  L
Sbjct: 628 TI--WRALLGACRVHKNVELGKLAAEKLLS--LEPLDSATYVLL 667



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 9/311 (2%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYF-SR 256
           +N     + L   +  H+ ++K G   +  +++ +L+  Y + G    A   F L   S+
Sbjct: 265 INLCANLKHLGLARQLHSSVLKHG-FHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQ 323

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +   W++ ++      G++     ++  +   GV       + IL +           ++
Sbjct: 324 NVVSWTAMIDGCIQ-NGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFP----PQI 378

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           HA +IK  ++    +  ALM  Y K    E A  +F  + D +D + W+ ++    +   
Sbjct: 379 HAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMI-DQKDVVSWSAMLTCYAQAGD 437

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE-GKQIHGYVLKSALESNLSVCN 435
              A   F +M     K    TI   + ACA   A  + G+Q H   +K      L V +
Sbjct: 438 CNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSS 497

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+SMY+R   +E A  VF+   D +L SWNSM+S Y   GY   A  +F +M    I  
Sbjct: 498 ALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDM 557

Query: 496 DIITWNCLLSG 506
           D +T+  ++ G
Sbjct: 558 DGLTFLSVIMG 568



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 120/268 (44%), Gaps = 4/268 (1%)

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           ++ ++   K S  +P    WT   S + Q   ++    F    +++        +  +++
Sbjct: 4   SMTLLAPAKRSTKFPTRTPWTMPFSTTWQGFVHQALDHFLDAHRRQGRCVGGGALLGIIK 63

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
            CG +     GK++H LC++ G    D  V T L+DMY    ++   R+VF     + + 
Sbjct: 64  ICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVV 123

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
           +W  ++ G+   G   + + LF  +   G  P+  TF+++L+   + G+V+ G ++  + 
Sbjct: 124 TWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLG-QHVHAQ 182

Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH-LE 889
           S  +    T+   + ++++  K G ++EA      M  + D   W  L+    ++G  LE
Sbjct: 183 SIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETR-DMVSWNTLMAGLVLNGRDLE 241

Query: 890 YAEIASRRLFKLEPCNSANYNLMMNLLA 917
             ++       +     + Y+ ++NL A
Sbjct: 242 ALQLFHDSRSSITMLTESTYSTVINLCA 269


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 233/755 (30%), Positives = 382/755 (50%), Gaps = 81/755 (10%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            W  ++     + + +  ++    M+    +  + T +  L +C    +  +G +IH  V+
Sbjct: 26   WTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVV 85

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             S LE +  V N L++MY +   L  A RVF                             
Sbjct: 86   DSRLEIDPKVSNALLNMYKKCGSLSHAKRVF----------------------------- 116

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
               KM  +R   ++I+W+ +   H  HG+    L   R M  LG +   S++  +L A +
Sbjct: 117  --AKMERTR---NVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACS 171

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN--RNIVAW 601
               L++ GR  H  I  +G + +L V  ++M MY +   ++ A++VFD M    R++V+W
Sbjct: 172  SPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSW 231

Query: 602  NSLISGYCFKGLFVNAKKMLNQME--------------------------------EEEI 629
            N ++S Y       +A ++  +M+                                 +E+
Sbjct: 232  NIMLSTYVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDEL 291

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
            + +++  N+LVS Y+  G   EA  +   M+   I    ++WT++IS  ++     E+  
Sbjct: 292  EKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSI----ISWTTIISAYVRRRLVAEACH 347

Query: 690  FFIQMQQ-------EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
             F QM +       + +KP++    ++L  C  +  L+ GK +       G   D  V T
Sbjct: 348  LFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGT 407

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKT-LASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             ++++Y K G ++ AR +F    ++  +  WN MI  +A +G   EA+ LF  +   G +
Sbjct: 408  AVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVR 467

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDY-NIIPTIEHYSCMVDLLGKAGYLDEAW 860
            PD+ +F ++L AC ++GL ++G  YF SM+T+Y N+  TI+H+ C+ DLLG+ G L EA 
Sbjct: 468  PDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAE 527

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            +F+  +P KPDA  W +LL +CR H  L+ A+  + +L +LEP  +  Y  + N+ A   
Sbjct: 528  EFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQ 587

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            +W  V ++R  M E GVK     S I+I + +H F+     HP   EI  EL  L S+MK
Sbjct: 588  KWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMK 647

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            + GYVPDT+ V   +DE+EK ++L SH+E+LAI  GL+ T    P+RV KN RVCSDCHT
Sbjct: 648  ECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHT 707

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            A K +S + GR+I +RD  RFH F++G+CSC D W
Sbjct: 708  ATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 153/621 (24%), Positives = 259/621 (41%), Gaps = 130/621 (20%)

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKL-- 303
           A  AF     R+   W+  +  + +  G+ +E L     +   GV  R   +T I  L  
Sbjct: 11  AKAAFDALEQRNLYSWTGLVAAF-AISGQSKETLRALERMRQDGV--RPDAVTFITALGS 67

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C    +   G+ +H  ++    + D  +  AL+N Y KC  +  A ++F+++    + + 
Sbjct: 68  CGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVIS 127

Query: 364 WNEIIMV---KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
           W+  IM     L    WE A++ FR M     KA    +V +L AC+      +G+ IH 
Sbjct: 128 WS--IMAGAHALHGNVWE-ALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHS 184

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD--HNLSSWNSMISSYTGLGYV 478
            +  S  ES L V N +++MY R   +E A +VFD+M +   ++ SWN M+S+Y      
Sbjct: 185 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRG 244

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
             A  L+ +M   +++PD +T+  LLS                                 
Sbjct: 245 KDAIQLYQRM---QLRPDKVTYVSLLS--------------------------------- 268

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
             A +    +  GR  H  I+ + L+ ++ VG +L+ MY K      A+ VFD M+ R+I
Sbjct: 269 --ACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSI 326

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEE-------EEIKPDLVSW--------------- 636
           ++W ++IS Y  + L   A  +  QM E       + +KPD +++               
Sbjct: 327 ISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQ 386

Query: 637 --------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                                ++V+ Y   G+ +EA  I   + +    P+V  W ++I+
Sbjct: 387 GKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSR---PDVQLWNAMIA 443

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
              Q     E+LK F +M+ E ++P+S +  S+L  C   GL   GK             
Sbjct: 444 VYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYF---------- 493

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
                T +   Y              ++  +T+  + C+       G  KEA     E L
Sbjct: 494 -----TSMTTEY--------------RNVTRTIQHFGCVADLLGRGGRLKEA----EEFL 530

Query: 797 ET-GFQPDAITFTALLAACKN 816
           E    +PDA+ +T+LLAAC+N
Sbjct: 531 EKLPVKPDAVAWTSLLAACRN 551



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 234/518 (45%), Gaps = 46/518 (8%)

Query: 216 QMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF-LYFSRSYADWSSFLEDYESFGGE 274
           QM+   ++     +  +L+  Y + G  + A + F  +  +R+   WS  +    +  G 
Sbjct: 82  QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS-IMAGAHALHGN 140

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
           V E L  +  +   G+      +  IL  C+       G  +H+ +   GF+ ++ +  A
Sbjct: 141 VWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANA 200

Query: 335 LMNFYGKCRDVESANKLFSEVSD-LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +M  YG+C  VE A K+F  + + L D + WN ++   + N++ ++AI+L++ MQ    K
Sbjct: 201 VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLRPDK 260

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T V +L AC+       G+ +H  ++   LE N+ V N L+SMY++      A  V
Sbjct: 261 V---TYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAV 317

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           FD M+  ++ SW ++IS+Y     V  A  LF +M                         
Sbjct: 318 FDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM------------------------- 352

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              L L +   S   +P+  +   +L A  ++  L+ G+         GL  D  VGT++
Sbjct: 353 ---LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAV 409

Query: 574 MDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           +++Y K   ++ A+ +FD + +R ++  WN++I+ Y   G    A K+  +ME E ++PD
Sbjct: 410 VNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPD 469

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL-----QNENYRES 687
             S+ S++   S  G   +       M     Y N VT T    G +     +    +E+
Sbjct: 470 SFSFVSILLACSHTGLEDQGKSYFTSMTTE--YRN-VTRTIQHFGCVADLLGRGGRLKEA 526

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            +F   +++  +KP++   +SLL  C     L+  KE+
Sbjct: 527 EEF---LEKLPVKPDAVAWTSLLAACRNHRDLKRAKEV 561



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/430 (23%), Positives = 189/430 (43%), Gaps = 49/430 (11%)

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           Q ++ +W  L++     G  +  L  L  M+  G RP+  +    L +  +   L+ G  
Sbjct: 20  QRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIR 79

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKG 612
            H  ++ + L+ D  V  +L++MY K   L +A+ VF  M + RN+++W+ +   +   G
Sbjct: 80  IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHG 139

Query: 613 --------------LFVNAKK-----MLNQMEEEEIKPD----------------LVSWN 637
                         L + A K     +L+      +  D                L+  N
Sbjct: 140 NVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVAN 199

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           ++++ Y   G  +EA  +   M  +    +VV+W  ++S  + N+  +++++ + +MQ  
Sbjct: 200 AVMTMYGRCGAVEEARKVFDAMDEA--LRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ-- 255

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            ++P+  T  SLL  C     +  G+ +H   + +   K+  V   L+ MY+K G+   A
Sbjct: 256 -LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEA 314

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE-------TGFQPDAITFTAL 810
           R VF K   +++ SW  +I  +       EA  LF ++LE          +PDA+ F  +
Sbjct: 315 RAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTI 374

Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
           L AC +   +E+G K     +    +       + +V+L GK G ++EA      +  +P
Sbjct: 375 LNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRP 433

Query: 871 DATIWGALLG 880
           D  +W A++ 
Sbjct: 434 DVQLWNAMIA 443



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 43/279 (15%)

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           MY   D   +A+  FD ++ RN+ +W  L++ +   G      + L +M ++ ++PD V+
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 636 W-----------------------------------NSLVSGYSIWGQSKEALVIIHHMK 660
           +                                   N+L++ Y   G    A  +   M+
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
            +    NV++W+ +      + N  E+L+ F  M    IK   + M ++L  C    L+Q
Sbjct: 121 RT---RNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR--KSANKTLASWNCMIMG 778
           +G+ IH     +GF  +  VA  ++ MY + G ++ AR+VF     A + + SWN M+  
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
           +     GK+AI L+  +     +PD +T+ +LL+AC ++
Sbjct: 238 YVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSA 273



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 8/261 (3%)

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           N+ +WT L++    +   +E+L+   +M+Q+ ++P++ T  + L +CG    L++G  IH
Sbjct: 22  NLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIH 81

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNG 785
            + + +    D  V+  L++MY K G+L  A+ VF K    + + SW+ M    A++GN 
Sbjct: 82  QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNV 141

Query: 786 KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            EA+  F  +L  G +        +L+AC +  LV++G +   S          +   + 
Sbjct: 142 WEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG-RMIHSCIALSGFESELLVANA 200

Query: 846 MVDLLGKAGYLDEAWDFIRTMPFK-PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
           ++ + G+ G ++EA      M     D   W  +L S  +H       I   +  +L P 
Sbjct: 201 VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML-STYVHNDRGKDAIQLYQRMQLRP- 258

Query: 905 NSANYNLMMNLLAMSNRWEDV 925
           +   Y   ++LL+  +  EDV
Sbjct: 259 DKVTY---VSLLSACSSAEDV 276



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 11/283 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY--ESFGGEVQELLEVWGELHGKG 289
           +L+  Y + G  T A   F     RS   W++ +  Y       E   L +   EL   G
Sbjct: 300 ALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNG 359

Query: 290 VIFRSR----ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
              R +        IL  C  + A   G  V       G   D  +  A++N YGKC ++
Sbjct: 360 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 419

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           E A ++F  V    D  LWN +I V  +  +   A+KLF  M+    +  S + V +L A
Sbjct: 420 EEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLA 479

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCN--CLISMYSRNNKLELATRVFDSMK-DHNL 462
           C+  G   +GK     +         ++ +  C+  +  R  +L+ A    + +    + 
Sbjct: 480 CSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDA 539

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            +W S++++      +  A  + NK+   R++P   T    LS
Sbjct: 540 VAWTSLLAACRNHRDLKRAKEVANKL--LRLEPRCATGYVALS 580



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 1/142 (0%)

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
           MY+   +   A+  F     + L SW  ++  FAI G  KE +     + + G +PDA+T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 807 FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
           F   L +C +   + +G +    M  D  +    +  + ++++  K G L  A      M
Sbjct: 61  FITALGSCGDPESLRDGIR-IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119

Query: 867 PFKPDATIWGALLGSCRIHGHL 888
               +   W  + G+  +HG++
Sbjct: 120 ERTRNVISWSIMAGAHALHGNV 141


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1005

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 249/805 (30%), Positives = 406/805 (50%), Gaps = 73/805 (9%)

Query: 245  SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
            S  K F     R+   W++ +  Y S  GE    L ++  +  +GV        ++LK C
Sbjct: 114  SQEKVFDEMRDRTAFAWNALIGAYVS-NGEPASALFIYRNMRVEGVPLDLYSFPVLLKAC 172

Query: 305  TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
             KL     G E+H  L+K GF+    +  AL++ Y K   + +A +LF    +  D +LW
Sbjct: 173  GKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLW 232

Query: 365  NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            N I+     + K    ++LFREMQ +   + S TIV  L AC        GK+IH  VLK
Sbjct: 233  NSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLK 292

Query: 425  SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
            S     + VCN LI+MY+R  K+  A R+   M +                         
Sbjct: 293  STHSFEVYVCNALIAMYARCGKMLEAGRILRLMNN------------------------- 327

Query: 485  FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
                       D++TWN L+ G+  +  Y+  L     M + G +P+  S++ V+ A   
Sbjct: 328  ----------ADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGR 377

Query: 545  LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
            L  L  G E H Y++++G D +L VG +L+DMY K +        F  M  +++++W ++
Sbjct: 378  LSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTI 437

Query: 605  ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI--IH-HMKN 661
            I+GY      V A ++   + ++ ++ D +   S++   S+    K  L++  IH H+  
Sbjct: 438  IAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVL---KSMLIVKEIHCHILR 494

Query: 662  SGIY------------------------------PNVVTWTSLISGSLQNENYRESLKFF 691
             G+                                +VV+WTS+IS S  N N  E+++ F
Sbjct: 495  KGLIDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELF 554

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             +M +  +  +S  +  +L     L  L+ G+EIH   L+ GF  +  +A  ++DMY+  
Sbjct: 555  RRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACC 614

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G+L+SA+ VF +   K L  +  MI  + ++G GK ++ LF+++      PD I+F ALL
Sbjct: 615  GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALL 674

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             AC ++GL++EG ++   M  +Y + P  EHY C+VD+LG+A  + EA++F++ M  +P 
Sbjct: 675  YACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPT 734

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
              +W ALL +CR H   E  EIA++RL +LEP N  N  L+ N+ A   RW DVE++R  
Sbjct: 735  TEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAK 794

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM-KKLGYVPDTRC 990
            M   G++     SWI++D  VH F+A    HP T EIY +L  +  ++ ++ GY+ DT+ 
Sbjct: 795  MKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERESGYLADTKF 854

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVY 1015
            +  ++DE EK ++L  H+E+LAI Y
Sbjct: 855  ILHNVDEGEKVQMLHGHSERLAIAY 879


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/582 (35%), Positives = 333/582 (57%), Gaps = 33/582 (5%)

Query: 527  GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            G   N    + VL      R ++ G+  H ++++      +Y+ T L+  YVK D L++A
Sbjct: 53   GLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDA 112

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV------ 640
            + VFD M  RN+V+W ++IS Y  +G    A  +  QM     +P+  ++ +++      
Sbjct: 113  RHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGS 172

Query: 641  SGYSIWGQSKEALVIIHHMKN--------------------SGIYP-----NVVTWTSLI 675
            SG+ +  Q    ++ +++  +                     GI+      +VV+ T++I
Sbjct: 173  SGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAII 232

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            SG  Q     E+L+ F ++Q+E ++ N  T +S+L    GL  L +GK++H   L++   
Sbjct: 233  SGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVP 292

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
                +   LIDMYSK GNL  AR +F     +T+ SWN M++G++ +G G+E + LF+ +
Sbjct: 293  SYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLM 352

Query: 796  L-ETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            + E   +PD++T  A+L+ C + GL ++G   ++D  S   ++ P  +HY C+VD+LG+A
Sbjct: 353  IDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRA 412

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G ++ A++F++ MPF+P A IWG LLG+C +H +L+  E    +L ++EP N+ NY ++ 
Sbjct: 413  GRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILS 472

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            NL A + RWEDV  LR+ M +  V      SWI++DQ++H F A    HP   E+  ++ 
Sbjct: 473  NLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQ 532

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L +  K+ GYVPD  CV  D+DEE+K K+LLSH+EKLA+ +GL+ T    PIRVIKN R
Sbjct: 533  ELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLR 592

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +C DCH  AKY S + GRE+ LRD  RFH    G+CSC D W
Sbjct: 593  ICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 175/366 (47%), Gaps = 37/366 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  C +  A   G  VHA +IK  +   V+L+  L+ FY KC  +  A  +F +V    
Sbjct: 64  VLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVF-DVMPER 122

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +I    +      A+ LF +M  S  +    T   +L +C     F  G+QIH
Sbjct: 123 NVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIH 182

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            +++K   E+++ V + L+ MY+++ K+  A  +F  + + ++ S  ++IS Y  LG  +
Sbjct: 183 SHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDE 242

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  LF ++    +Q + +T             Y +VLT L G+ +              
Sbjct: 243 EALELFRRLQREGMQSNYVT-------------YTSVLTALSGLAA-------------- 275

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
                   L +G++ H ++LR+ +   + +  SL+DMY K   L  A+ +FD +  R ++
Sbjct: 276 --------LDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVI 327

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           +WN+++ GY   G      ++ N M +E ++KPD V+  +++SG S  G   + + I + 
Sbjct: 328 SWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYD 387

Query: 659 MKNSGI 664
           M +  I
Sbjct: 388 MTSGKI 393



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/432 (21%), Positives = 187/432 (43%), Gaps = 72/432 (16%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L  C +  A  EG+++H +++K+     + +   LI  Y + + L  A  VFD M + N
Sbjct: 64  VLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERN 123

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                              +++W  ++S +   G     L+L  
Sbjct: 124 -----------------------------------VVSWTAMISAYSQRGYASQALSLFV 148

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M   G  PN  + + VL +         GR+ H +I++   +  +YVG+SL+DMY K+ 
Sbjct: 149 QMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDG 208

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            +  A+ +F  +  R++V+  ++ISGY   GL   A ++  +++ E ++ + V++ S+++
Sbjct: 209 KIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLT 268

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYP-------------------------------NVVT 670
             S          + +H+  S +                                  V++
Sbjct: 269 ALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVIS 328

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           W +++ G  ++   RE L+ F  M  E+ +KP+S T+ ++L  C   GL   G +I    
Sbjct: 329 WNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIF-YD 387

Query: 730 LKNGFIK---DAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNG 785
           + +G I    D+     ++DM  ++G +++A E  +K     + A W C++   +++ N 
Sbjct: 388 MTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNL 447

Query: 786 KEAILLFHELLE 797
                + H+LL+
Sbjct: 448 DIGEFVGHQLLQ 459



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 170/366 (46%), Gaps = 17/366 (4%)

Query: 163 KPNSITNSPTS----LALPPTDTLAKQAQLSCISSGF--------CFLNETNKFRCLSSV 210
           KP  ++  P++    L +   DT  ++A L     G           LNE  + R +   
Sbjct: 18  KPRLLSTFPSNSHHVLNIHIHDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREG 77

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           +  HA MIK   +       + ++F Y++      A   F +   R+   W++ +  Y S
Sbjct: 78  QRVHAHMIKTHYLPCVYLRTRLIVF-YVKCDSLRDARHVFDVMPERNVVSWTAMISAY-S 135

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G   + L ++ ++   G          +L  C     F LG ++H+ +IK  ++  V+
Sbjct: 136 QRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVY 195

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  +L++ Y K   +  A  +F  + +  D +    II    +    E A++LFR +Q  
Sbjct: 196 VGSSLLDMYAKDGKIHEARGIFQCLPE-RDVVSCTAIISGYAQLGLDEEALELFRRLQRE 254

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             ++   T   +L A + + A   GKQ+H ++L+S + S + + N LI MYS+   L  A
Sbjct: 255 GMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYA 314

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFT 509
            R+FD++ +  + SWN+M+  Y+  G       LFN M + ++++PD +T   +LSG  +
Sbjct: 315 RRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSG-CS 373

Query: 510 HGSYQN 515
           HG  ++
Sbjct: 374 HGGLED 379



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 4/189 (2%)

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
           + +   RE+L   + M    +  N    +++L  C     ++ G+ +H   +K  ++   
Sbjct: 37  IHDTRLREAL---LHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCV 93

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
           Y+ T LI  Y K  +L+ AR VF     + + SW  MI  ++  G   +A+ LF ++L +
Sbjct: 94  YLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRS 153

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
           G +P+  TF  +L +C  S     G +   S     N    +   S ++D+  K G + E
Sbjct: 154 GTEPNEFTFATVLTSCIGSSGFVLG-RQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHE 212

Query: 859 AWDFIRTMP 867
           A    + +P
Sbjct: 213 ARGIFQCLP 221


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 631

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/601 (35%), Positives = 329/601 (54%), Gaps = 33/601 (5%)

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRP-NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            +F H S+   L     + S    P N    + +L++    + L+ G++ H  + + G+ Y
Sbjct: 32   YFLHQSFATQLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAY 91

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            +L + T L++ Y   + L+NA  +FD +   N+  WN LI  Y + G    A  + +QM 
Sbjct: 92   NLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQML 151

Query: 626  EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG---------------------- 663
            E  +KPD  +   ++   S      E  VI   +  SG                      
Sbjct: 152  EYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVV 211

Query: 664  ---------IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
                     +  + V W S+++   QN +  ESL    +M  + ++P   T+ +++ +  
Sbjct: 212  DARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSA 271

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             +  L +G+EIH    ++GF  +  V T LIDMY+K G++K A  +F +   K + SWN 
Sbjct: 272  DIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNA 331

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            +I G+A++G   EA+ LF  +++   QPD ITF   LAAC    L++EG   ++ M  D 
Sbjct: 332  IITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDC 390

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             I PT+EHY+CMVDLLG  G LDEA+D IR M   PD+ +WGALL SC+ HG++E AE+A
Sbjct: 391  RINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVA 450

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
              +L +LEP +S NY ++ N+ A S +WE V RLR  M + G+K  +  SWI++   V+ 
Sbjct: 451  LEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYA 510

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F +    HP +G IY EL  L   M++ GYVPDT  V+ D++E+EK  ++ SH+E+LAI 
Sbjct: 511  FLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIA 570

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +GL+ T     + + KN R+C DCH A K++S +  REI +RD  R+HHFR G CSC D 
Sbjct: 571  FGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDY 630

Query: 1075 W 1075
            W
Sbjct: 631  W 631



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 199/419 (47%), Gaps = 41/419 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C    A   G ++HA L + G  +++ L   L+NFY  C  + +A+ LF ++    
Sbjct: 64  LLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPK-G 122

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +  LWN +I     N   E AI L+ +M     K  + T+  +L+AC+ +    EG+ IH
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIH 182

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             V++S  E ++ V   L+ MY++   +  A  VFD + D +   WNSM+++Y   G+ D
Sbjct: 183 ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPD 242

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            + SL  +M +                                    G RP  +++  V+
Sbjct: 243 ESLSLCCEMAAK-----------------------------------GVRPTEATLVTVI 267

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            +  ++  L +GRE HG+  R+G  Y+  V T+L+DMY K   ++ A  +F+ ++ + +V
Sbjct: 268 SSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVV 327

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +WN++I+GY   GL V A  +  +M +E  +PD +++   ++  S      E   + + M
Sbjct: 328 SWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLM 386

Query: 660 -KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            ++  I P V  +T ++          E+     QM   D+ P+S    +LL +C   G
Sbjct: 387 VRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQM---DVMPDSGVWGALLNSCKTHG 442



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 192/452 (42%), Gaps = 79/452 (17%)

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
           F S+ +       +L++C    A   GKQ+H  + +  +  NL +   L++ YS  N L 
Sbjct: 51  FPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLR 110

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A  +FD +   NL  WN +I +Y                           WN       
Sbjct: 111 NAHHLFDKIPKGNLFLWNVLIRAYA--------------------------WN------- 137

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             G ++  ++L   M   G +P+  ++  VL+A + L  +  GR  H  ++R+G + D++
Sbjct: 138 --GPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVF 195

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           VG +L+DMY K  C+ +A+ VFD + +R+ V WNS+++ Y   G    +  +  +M  + 
Sbjct: 196 VGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKG 255

Query: 629 IKP---DLVS---------------------W-----------NSLVSGYSIWGQSKEAL 653
           ++P    LV+                     W            +L+  Y+  G  K A 
Sbjct: 256 VRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVAC 315

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           V+   ++       VV+W ++I+G   +    E+L  F +M +E  +P+  T    L  C
Sbjct: 316 VLFERLREK----RVVSWNAIITGYAMHGLAVEALDLFERMMKE-AQPDHITFVGALAAC 370

Query: 714 GGLGLLQNGKEIHCLCLKNGFIKDAYVA-TGLIDMYSKSGNLKSAREVFRK-SANKTLAS 771
               LL  G+ ++ L +++  I       T ++D+    G L  A ++ R+         
Sbjct: 371 SRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGV 430

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           W  ++     +GN + A +   +L+E   +PD
Sbjct: 431 WGALLNSCKTHGNVELAEVALEKLIE--LEPD 460



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 142/296 (47%), Gaps = 4/296 (1%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           + L   K  HA++ ++G  +N D +   L+  Y       +A   F      +   W+  
Sbjct: 72  KALEPGKQLHARLCQLGIAYNLD-LATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVL 130

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +  Y ++ G  +  + ++ ++   G+   +  L  +LK C+ L     G  +H  +I+ G
Sbjct: 131 IRAY-AWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSG 189

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           ++ DV +  AL++ Y KC  V  A  +F ++ D  D +LWN ++    +N   + ++ L 
Sbjct: 190 WERDVFVGAALVDMYAKCGCVVDARHVFDKIVD-RDAVLWNSMLAAYAQNGHPDESLSLC 248

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            EM     +    T+V ++ + A +     G++IHG+  +   + N  V   LI MY++ 
Sbjct: 249 CEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKC 308

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
             +++A  +F+ +++  + SWN++I+ Y   G    A  LF +M     QPD IT+
Sbjct: 309 GSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERM-MKEAQPDHITF 363


>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
 gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
          Length = 840

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 256/789 (32%), Positives = 411/789 (52%), Gaps = 46/789 (5%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           R LS  +  H +++K G+    ++ +++ L+  Y +  +   A + F     ++   W++
Sbjct: 92  RALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAA 151

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +   +S  G  QE L  + E+H  G++  + ++ I  K    L     G  VHA ++K 
Sbjct: 152 IM-GLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKM 210

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIK 382
           G    +++  +L++ YGKC   E A K+F ++  LE +++ WN +I+   +N     A++
Sbjct: 211 GLGGCIYVATSLLDMYGKCGLCEEAKKVFDKI--LEKNIVAWNSMIVNFTQNGLNAEAVE 268

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
            F EM+         T+   L A A +    EGKQ H   + S LE              
Sbjct: 269 TFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLE-------------- 314

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
                   T +  S          S+I+ Y+ +G V+ A  +F++M    ++ D +TWN 
Sbjct: 315 -------LTNILGS----------SLINFYSKVGLVEDAELVFSEM----LEKDTVTWNL 353

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           L+SG+  +G     L L   MQS   R +  +++ ++ A  + R LK G+E H + +RN 
Sbjct: 354 LVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNN 413

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           L+ D+ V +S++DMY K + L+ A+ VFD    R+++ WN+L++ Y  +G      K+  
Sbjct: 414 LESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFY 473

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
           QM+ E + P+++SWNS++ G    G+  +A      M++ GI PN++TWT+LI G  QN 
Sbjct: 474 QMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNG 533

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              E+   F  M++  IKPNS ++SSLL  C  +  L +G+ IHC   ++       V  
Sbjct: 534 LGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLC 593

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L++MY+K G++  A+ VF     K L  +N MI G+A++G   EA+ LF  L E   +P
Sbjct: 594 SLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKP 653

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D ITFT++L+AC ++GLV EG + F  M +++ I+   EHY C+V +L ++  LDEA   
Sbjct: 654 DEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRI 713

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
           I  MPF+PDA I+G+LL +CR H   E  E    RL KLEP NS NY  + N  A +  W
Sbjct: 714 ILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMW 773

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
           ++  ++R  M E  +  +   S IQI    HVF A    H  T EIY  L  L  EM+  
Sbjct: 774 DEASKVRGLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMMLALLRVEMQF- 832

Query: 983 GYVPDTRCV 991
                TRC+
Sbjct: 833 -----TRCI 836



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 153/659 (23%), Positives = 281/659 (42%), Gaps = 102/659 (15%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF--DVH 330
           G + E L++  +L  + +     +   +L+ C    A  LG ++H  ++K G     + +
Sbjct: 57  GHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEY 116

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           ++  L+ FY KC + E AN+LF ++  ++++  W  I+ +K R    + A+  FREM   
Sbjct: 117 IETKLVIFYSKCDESEIANRLFGKL-QVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEY 175

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                +  I    +A   +     GK +H YV+K  L   + V   L+ MY +    E A
Sbjct: 176 GLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEA 235

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            +VFD + + N+ +WNSMI ++T  G    A   F +M    + P  +T +  LS     
Sbjct: 236 KKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLS----- 290

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                                         A   L ++  G++ H   + +GL+    +G
Sbjct: 291 ------------------------------ASANLSVIDEGKQGHALAVLSGLELTNILG 320

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           +SL++ Y K   +++A+ VF  M  ++ V WN L+SGY   GL   A  + + M+ E ++
Sbjct: 321 SSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLR 380

Query: 631 PDLVSWNSLVS-------------GYSIWGQSK------------------EALVIIHHM 659
            D V+  S+++             G+S   ++                   E L     +
Sbjct: 381 FDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRV 440

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
            ++    +++ W +L++   +  +  E+LK F QMQ E + PN  + +S++     LGLL
Sbjct: 441 FDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVI-----LGLL 495

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             GK            KD ++                  E+        L +W  +I G 
Sbjct: 496 NKGKVDQA--------KDTFM------------------EMQSLGICPNLITWTTLICGL 529

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
           A  G G EA L F  + E G +P++++ ++LL+AC     +  G +      T + +  +
Sbjct: 530 AQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHG-RAIHCYITRHELSVS 588

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
                 +V++  K G +++A   +  M  K +  ++ A++    +HG    A    RRL
Sbjct: 589 TPVLCSLVNMYAKCGSINQA-KRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRL 646



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 17/228 (7%)

Query: 643 YSIWGQSKEALVIIHHMKNSGIYPNV-VTWTSL---ISGSLQNENYRESLKFFIQMQQED 698
           YS++   K      H    S I  NV +++ S    IS   +  +  E+L     ++ ED
Sbjct: 14  YSLYTPRKPHYSPTHFASFSQIASNVQISYKSYLNHISSLCKQGHLLEALDLVTDLELED 73

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG--FIKDAYVATGLIDMYSKSGNLKS 756
           I         LLQ C     L  G++IH   LKNG    K+ Y+ T L+  YSK    + 
Sbjct: 74  ITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEI 133

Query: 757 AREVFRKSANKTLASWNCMIMGF-AIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
           A  +F K   +   SW   IMG  +  G  +EA++ F E+ E G   D         A K
Sbjct: 134 ANRLFGKLQVQNEFSW-AAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIP---IAFK 189

Query: 816 NSGLVEEGWKYFDSMSTDY----NIIPTIEHYSCMVDLLGKAGYLDEA 859
            SG +   W  F      Y     +   I   + ++D+ GK G  +EA
Sbjct: 190 ASGALR--WIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEA 235


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like
            [Glycine max]
          Length = 703

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/651 (34%), Positives = 361/651 (55%), Gaps = 37/651 (5%)

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            KD +++  NS+I+ Y+  G    A  LF++M    +Q ++++W+ L+ G+   G    VL
Sbjct: 57   KDSDITQINSLINLYSKCGQSKCARKLFDRM----LQRNVVSWSALMMGYLHKGEVLEVL 112

Query: 518  TLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
             L R + SL    PN    ++VL    +   +K G++ HGY+L++GL    YV  +L+ M
Sbjct: 113  GLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHM 172

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
            Y +   + +A ++ D +   ++ ++NS++S     G    A ++L +M +E +  D V++
Sbjct: 173  YSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTY 232

Query: 637  NSLVS----------GYSIWGQSKEALVIIHHMKNSGIYP-------------------- 666
             S++           G  I  Q  +  ++     +S +                      
Sbjct: 233  VSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRD 292

Query: 667  -NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             NVV WT++++  LQN ++ E+L  F +M+ ED +PN  T + LL  C  L  L  G  +
Sbjct: 293  RNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLL 352

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            H   + +GF     V   LI+MYSKSGN+ S+  VF    N+ + +WN MI G++ +G G
Sbjct: 353  HGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLG 412

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            K+A+L+F +++  G  P+ +TF  +L+AC +  LV+EG+ YFD +   +++ P +EHY+C
Sbjct: 413  KQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTC 472

Query: 846  MVDLLGKAGYLDEAWDFIRTMP-FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
            MV LLG+AG LDEA +F++T    K D   W  LL +C IH +    +  +  + +++P 
Sbjct: 473  MVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPH 532

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            +   Y L+ N+ A + +W+ V ++R  M E  +K     SW+ I    HVF +EG+ HP 
Sbjct: 533  DVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPE 592

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
            + +I+ ++  L++ +K LGY PD   V  D+++E+K   L  H+EKLA+ YGLMK     
Sbjct: 593  STQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPG 652

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            PIR+IKN R+C DCH A K +S    R I +RD  RFHHFREG C+CND W
Sbjct: 653  PIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 225/517 (43%), Gaps = 76/517 (14%)

Query: 211 KSKHAQMIKMGKIWNSDDM--VKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           K+ HAQ++   +     D+  + SLI  Y + G    A K F     R+   WS+ +  Y
Sbjct: 43  KTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGY 102

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSR-ILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
               GEV E+L ++  L      + +  I TI+L  C        G + H  L+K G   
Sbjct: 103 -LHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLL 161

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
             ++K AL++ Y +C  V+SA ++   V   +D   +N I+   + +     A ++ + M
Sbjct: 162 HQYVKNALIHMYSRCFHVDSAMQILDTVPG-DDVFSYNSILSALVESGCRGEAAQVLKRM 220

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                   S T V +L  CA++     G QIH  +LK+ L  ++ V + LI  Y +  ++
Sbjct: 221 VDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEV 280

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
             A + FD ++D N+ +W +++++Y   G+ +   +LF KM     +P+  T+       
Sbjct: 281 LNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTF------- 333

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                                       +V+L A   L  L YG   HG I+ +G    L
Sbjct: 334 ----------------------------AVLLNACASLVALAYGDLLHGRIVMSGFKNHL 365

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            VG +L++MY K+  + ++  VF NM NR+++ WN++I GY   GL              
Sbjct: 366 IVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGL-------------- 411

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                                 K+AL++   M ++G  PN VT+  ++S  +     +E 
Sbjct: 412 ---------------------GKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEG 450

Query: 688 LKFFIQ-MQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             +F Q M++ D++P     + ++   G  GLL   +
Sbjct: 451 FYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAE 487



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 205/463 (44%), Gaps = 81/463 (17%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKR---GFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           +LK      +   G  +HA L+ R     D D+    +L+N Y KC   + A KLF  + 
Sbjct: 29  LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRM- 87

Query: 357 DLEDDLL-WNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHE 414
            L+ +++ W+ ++M  L   +    + LFR +    SA         +L  CA  G   E
Sbjct: 88  -LQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           GKQ HGY+LKS L  +  V N LI MYSR   ++ A ++ D++   ++ S+NS++S+   
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            G    A  +  +M       + + W+ +        +Y +VL L               
Sbjct: 207 SGCRGEAAQVLKRM-----VDECVIWDSV--------TYVSVLGL--------------- 238

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
                    ++R L+ G + H  +L+ GL +D++V ++L+D Y K   + NA++ FD ++
Sbjct: 239 -------CAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLR 291

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------- 632
           +RN+VAW ++++ Y   G F     +  +ME E+ +P+                      
Sbjct: 292 DRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDL 351

Query: 633 -------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                        L+  N+L++ YS  G    +  +  +M N     +V+TW ++I G  
Sbjct: 352 LHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNR----DVITWNAMICGYS 407

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
            +   +++L  F  M      PN  T   +L  C  L L+Q G
Sbjct: 408 HHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEG 450


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/713 (31%), Positives = 377/713 (52%), Gaps = 71/713 (9%)

Query: 430  NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
            N    N +IS Y ++  L  A ++FD M +    +W  +I  Y+ L     A+ LF +M 
Sbjct: 77   NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136

Query: 490  SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP------------------- 530
                +PD +T+  LLSG   H     +  +   +  LG+                     
Sbjct: 137  RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 196

Query: 531  ------------NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
                        +  + + VL A   L  +  G++ H ++++    ++++V  +L+D Y 
Sbjct: 197  LACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYS 256

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAK------------- 618
            K+D + +A+++FD M  ++ V++N +ISGY + G       LF   +             
Sbjct: 257  KHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFAT 316

Query: 619  -----------KMLNQMEEEEI----KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
                       +M  Q+  + I      +++  NSLV  Y+  G+ +EA +I  ++ +  
Sbjct: 317  MLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRS 376

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              P    WT++IS  +Q   Y E L+ F +M+Q  +  +  T +SLL+    +  L  GK
Sbjct: 377  AVP----WTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGK 432

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            ++H   +K+GF+ + +  + L+D+Y+K G++K A + F++  ++ + SWN MI  +A  G
Sbjct: 433  QLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNG 492

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
              +  +  F E++ +G QPD+++F  +L+AC +SGLVEEG  +F+SM+  Y + P  EHY
Sbjct: 493  EAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY 552

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            + +VD+L ++G  +EA   +  MP  PD  +W ++L +CRIH + E A  A+ +LF +E 
Sbjct: 553  ASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEE 612

Query: 904  C-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
              ++A Y  M N+ A + +WE+V ++  +M + GVK +  +SW++I    H+FSA    H
Sbjct: 613  LRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCH 672

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P   EI  ++  L   M++LGY PDT C   + DE+ K + L  H+E+LAI + L+ T  
Sbjct: 673  PQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPE 732

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +PI V+KN R C DCH A K +S + GREI +RD  RFHHFR+G CSC D W
Sbjct: 733  GSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 219/472 (46%), Gaps = 55/472 (11%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG ++H+ +IK  F ++V +  AL++FY K   V  A KLF E+ + +D + +N II   
Sbjct: 228 LGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE-QDGVSYNVIISGY 286

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             + K + A  LFRE+QF++          ML   +    +  G+QIH   + +  +S +
Sbjct: 287 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI 346

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N L+ MY++  K E A  +F ++   +   W +MIS+Y   G+ +    LFNKM  +
Sbjct: 347 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 406

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
            +  D  T+  LL                        R + S  S+ L           G
Sbjct: 407 SVIADQATFASLL------------------------RASASIASLSL-----------G 431

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           ++ H +I+++G   +++ G++L+D+Y K   +++A + F  M +RNIV+WN++IS Y   
Sbjct: 432 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQN 491

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY---PNV 668
           G      K   +M    ++PD VS+  ++S  S  G  +E L   + M  + IY   P  
Sbjct: 492 GEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSM--TQIYKLDPRR 549

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
             + S++    ++  + E+ K   +M    I P+    SS+L  C     +   +E+   
Sbjct: 550 EHYASVVDMLCRSGRFNEAEKLMAEMP---IDPDEIMWSSVLNACR----IHKNQELARR 602

Query: 729 CLKNGF----IKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWN 773
                F    ++DA     + ++Y+ +G   N+    +  R    K L +++
Sbjct: 603 AADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYS 654



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/499 (21%), Positives = 212/499 (42%), Gaps = 84/499 (16%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           +++ Y K  ++  A KLF  + +    + W  +I    +  +++ A +LF +MQ    + 
Sbjct: 84  MISGYVKSGNLGEARKLFDGMVE-RTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEP 142

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T V +L  C      ++  Q+   ++K   +S L V N L+  Y ++N+L+LA ++F
Sbjct: 143 DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLF 202

Query: 455 DSMKDHNLSSWNSMISSYTGLGYV-------------DVAWSLF---------------- 485
             M + +  ++ +++ +  GL  +             +  W++F                
Sbjct: 203 KEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 262

Query: 486 --NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
              K+     + D +++N ++SG+   G ++    L R +Q   F       + +L   +
Sbjct: 263 DARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIAS 322

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
                + GR+ H   +    D ++ VG SL+DMY K    + A+ +F N+ +R+ V W +
Sbjct: 323 NTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTA 382

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--------------------- 642
           +IS Y  KG +    ++ N+M +  +  D  ++ SL+                       
Sbjct: 383 MISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSG 442

Query: 643 --------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
                         Y+  G  K+A+     M +     N+V+W ++IS   QN     +L
Sbjct: 443 FMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR----NIVSWNAMISAYAQNGEAEATL 498

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-------KEIHCLCLKNGFIKDAYVA 741
           K F +M    ++P+S +   +L  C   GL++ G        +I+ L  +    ++ Y +
Sbjct: 499 KSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPR----REHYAS 554

Query: 742 TGLIDMYSKSGNLKSAREV 760
             ++DM  +SG    A ++
Sbjct: 555 --VVDMLCRSGRFNEAEKL 571



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 174/397 (43%), Gaps = 41/397 (10%)

Query: 528 FRPNGSSVSVVLQAVTELR----LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
           FRPN       L ++  L+     L         I++ G D D       +  ++KN  L
Sbjct: 4   FRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGEL 63

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             A+++F+ M ++N V+ N +ISGY   G    A+K+ + M E       V+W  L+ GY
Sbjct: 64  SQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTA----VTWTILIGGY 119

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE--------------------- 682
           S   Q KEA  +   M+  G  P+ VT+ +L+SG   +E                     
Sbjct: 120 SQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRL 179

Query: 683 --------NYRES--LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
                   +Y +S  L    Q+ +E  + +S T +++L    GL  +  G++IH   +K 
Sbjct: 180 IVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKT 239

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            F+ + +V+  L+D YSK  ++  AR++F +   +   S+N +I G+A  G  K A  LF
Sbjct: 240 NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 299

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            EL  T F      F  +L+   N+   E G +   + +        I   + +VD+  K
Sbjct: 300 RELQFTAFDRKQFPFATMLSIASNTLDWEMG-RQIHAQTIVTTADSEILVGNSLVDMYAK 358

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLE 889
            G  +EA + I T      A  W A++ +    G  E
Sbjct: 359 CGKFEEA-EMIFTNLTHRSAVPWTAMISAYVQKGFYE 394



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/424 (22%), Positives = 195/424 (45%), Gaps = 15/424 (3%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H+ +IK   +WN   +  +L+  Y +      A K F     +    ++  +  Y ++ G
Sbjct: 233 HSFVIKTNFVWNVF-VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY-AWDG 290

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           + +   +++ EL       +      +L + +  + + +G ++HA  I    D ++ +  
Sbjct: 291 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN 350

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +L++ Y KC   E A  +F+ ++     + W  +I   ++   +E  ++LF +M+ +S  
Sbjct: 351 SLVDMYAKCGKFEEAEMIFTNLTH-RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVI 409

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A   T   +L+A A + +   GKQ+H +++KS   SN+   + L+ +Y++   ++ A + 
Sbjct: 410 ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQT 469

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F  M D N+ SWN+MIS+Y   G  +     F +M  S +QPD +++  +LS     G  
Sbjct: 470 FQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLV 529

Query: 514 QNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGR--ESHGYILRNGLDYDLYVG 570
           +  L     M Q     P     + V+       L + GR  E+   +    +D D  + 
Sbjct: 530 EEGLWHFNSMTQIYKLDPRREHYASVVDM-----LCRSGRFNEAEKLMAEMPIDPDEIMW 584

Query: 571 TSLMDM--YVKNDCL--QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           +S+++     KN  L  + A ++F+  + R+   + ++ + Y   G + N  K+   M +
Sbjct: 585 SSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRD 644

Query: 627 EEIK 630
             +K
Sbjct: 645 RGVK 648


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/701 (32%), Positives = 370/701 (52%), Gaps = 81/701 (11%)

Query: 415  GKQIHGYVLKS---ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
            G+ IH +++++    L S LS  N L++MYS+ + L  A  V        + +W S+IS 
Sbjct: 25   GRTIHAHIIRTHVTPLPSFLS--NHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISG 82

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                            +++ R  P ++        HFT+    NV            +PN
Sbjct: 83   C---------------VHNRRFLPALL--------HFTNMRRDNV------------QPN 107

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   V +A   +++   G++ HG  L+ G+ YD++VG S  DMY K     +A  +FD
Sbjct: 108  DFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFD 167

Query: 592  NMKNRNIVAWNSLISG-----------------YCFKG--------LFVNA--------- 617
             M  RN+  WN+ IS                   C  G         F+NA         
Sbjct: 168  EMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNL 227

Query: 618  -KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
             +++   +     K D+   N L+  Y   G    A ++ + + N     NVV+W S+++
Sbjct: 228  GRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNR---KNVVSWCSMLA 284

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
              +QN     +   F+Q ++E ++P    +SS+L  C  LG L+ G+ +H L +K     
Sbjct: 285  ALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVED 343

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            + +V + L+DMY K G++++A +VF +   + L +WN MI G+A  G+   A+ LF E+ 
Sbjct: 344  NIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMT 403

Query: 797  --ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
                G +P  +T  ++L+ C   G VE G + F+SM  +Y I P  EH++C+VDLLG++G
Sbjct: 404  LGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSG 463

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             +D A++FI+ M  +P  ++WGALLG+CR+HG  E  +IA+ +LF+L+  +S N+ ++ N
Sbjct: 464  LVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSN 523

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            +LA + RWE+   +R  M ++G+K  + +SWI +   +HVF A+ + H    EI   L  
Sbjct: 524  MLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGK 583

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            L   MK+ GYVPDT     D+++EEK   +  H+EK+A+ +GL+      PIR+ KN R+
Sbjct: 584  LRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRI 643

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH+A K++S + GREI +RD  RFH F++G CSC D W
Sbjct: 644  CGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 211/476 (44%), Gaps = 58/476 (12%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFL---- 265
           K  H   +K G I+  D  V    F  Y + G    A   F     R+ A W++++    
Sbjct: 128 KQIHGLALKGGMIY--DVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV 185

Query: 266 EDYESFGGEV--QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
           +D  S    V  +E L V GE +       S      L  C  ++   LG ++HA +++ 
Sbjct: 186 QDRRSLDAIVAFKEFLCVHGEPN-------SITFCAFLNACVDMVRLNLGRQLHAFIVRC 238

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G+  DV +   L++FYGKC D+ SA  +F+ + + ++ + W  ++   ++N + E A  +
Sbjct: 239 GYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMV 298

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F + +    +     I  +L ACA++G    G+ +H   +K+ +E N+ V + L+ MY +
Sbjct: 299 FLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGK 357

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              +E A +VF  + + NL +WN+MI  Y   G +D+A  LF +M               
Sbjct: 358 CGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMT-------------- 403

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           L  H    SY  ++++L     +G    G      +Q    +R L YG E        G 
Sbjct: 404 LGSHGIRPSYVTLISILSVCSRVGAVERG------IQIFESMR-LNYGIEP-------GA 449

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKG---LFVNAKK 619
           ++       ++D+  ++  +  A E   NM     I  W +L+      G   L   A +
Sbjct: 450 EH----FACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAE 505

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV-VTWTSL 674
            L +++  +    +V  N L S     G+ +EA V+   MK+ GI  NV  +W ++
Sbjct: 506 KLFELDHVDSGNHVVLSNMLASA----GRWEEATVVRKEMKDIGIKKNVGYSWIAV 557



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 184/415 (44%), Gaps = 44/415 (10%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++H   +K G  +DV + C+  + Y K      A  +F E+    +   WN  I   +
Sbjct: 127 GKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQ-RNLATWNAYISNAV 185

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           ++ +  +AI  F+E      +  S T    L AC  +   + G+Q+H ++++   + ++S
Sbjct: 186 QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVS 245

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           V N LI  Y +   +  A  VF+ + +  N+ SW SM+++                    
Sbjct: 246 VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQ----------------- 288

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                             H   +  +  L+  + +   P    +S VL A  EL  L+ G
Sbjct: 289 -----------------NHEEERACMVFLQARKEV--EPTDFMISSVLSACAELGGLELG 329

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           R  H   ++  ++ +++VG++L+DMY K   ++NA++VF  +  RN+V WN++I GY  +
Sbjct: 330 RSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQ 389

Query: 612 GLFVNAKKMLNQME--EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNV 668
           G    A ++  +M      I+P  V+  S++S  S  G  +  + I   M+ N GI P  
Sbjct: 390 GDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGA 449

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             +  ++    ++     + +F   +Q   I+P  +   +LL  C   G  + GK
Sbjct: 450 EHFACVVDLLGRSGLVDRAYEF---IQNMAIQPTISVWGALLGACRMHGKTELGK 501



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 120/529 (22%), Positives = 215/529 (40%), Gaps = 86/529 (16%)

Query: 312 LGVEVHASLIKRGFD-FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
           LG  +HA +I+         L   L+N Y K   + SA  + S ++ L   + W  +I  
Sbjct: 24  LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLS-LTHLRTVVTWTSLISG 82

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
            + N ++  A+  F  M+  + +    T   + +A A V     GKQIHG  LK  +  +
Sbjct: 83  CVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYD 142

Query: 431 LSV-CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           + V C+C   MY +      A  +FD M   NL++WN+ IS               N + 
Sbjct: 143 VFVGCSCF-DMYCKTGFRGDACNMFDEMPQRNLATWNAYIS---------------NAVQ 186

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
             R    I+ +   L     HG                  PN  +    L A  ++  L 
Sbjct: 187 DRRSLDAIVAFKEFLC---VHG-----------------EPNSITFCAFLNACVDMVRLN 226

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGY 608
            GR+ H +I+R G   D+ V   L+D Y K   + +A+ VF+ + NR N+V+W S+++  
Sbjct: 227 LGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAAL 286

Query: 609 ---------CFKGLFVNAKKMLNQME---------------------------EEEIKPD 632
                    C   +F+ A+K +   +                           +  ++ +
Sbjct: 287 VQNHEEERACM--VFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDN 344

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           +   ++LV  Y   G  + A  +   +       N+VTW ++I G     +   +L+ F 
Sbjct: 345 IFVGSALVDMYGKCGSIENAEQVFSELPER----NLVTWNAMIGGYAHQGDIDMALRLFE 400

Query: 693 QMQ--QEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYS 749
           +M      I+P+  T+ S+L  C  +G ++ G +I   + L  G    A     ++D+  
Sbjct: 401 EMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLG 460

Query: 750 KSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           +SG +  A E  +  A   T++ W  ++    ++G  +   +   +L E
Sbjct: 461 RSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFE 509


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like
            [Vitis vinifera]
          Length = 647

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/687 (32%), Positives = 358/687 (52%), Gaps = 79/687 (11%)

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            K +   +V +L  C  +   ++ KQ+H ++ +  LE     C  L  +     KL++   
Sbjct: 36   KILESRLVSVLHGCTHI---NQVKQVHAHIFRKGLEQ---CCFVLAKLLRTLTKLDVP-- 87

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
                            +  Y  L +  V +            P+   W  L+ G+   G 
Sbjct: 88   ----------------MDPYPRLVFQQVEY------------PNPFLWTALIRGYALQGP 119

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY-ILRNGLDYDLYVGT 571
            +   + L   M+  G  P   + + +L+A +    +  GR+ H   IL  G   DLYVG 
Sbjct: 120  FMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGN 179

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            +L+DMYVK  CL     VFD M +R                                   
Sbjct: 180  TLIDMYVKCGCLGCGHRVFDEMLDR----------------------------------- 204

Query: 632  DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
            D++SW SL+  Y+  G  + A  +   +       ++V WT++++G  QN   RE+L+ F
Sbjct: 205  DVISWTSLIVAYAKVGNMEAASELFDGLP----MKDMVAWTAMVTGYAQNARPREALEVF 260

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF--IKDAYVATGLIDMYS 749
             +MQ   +K +  T+  ++  C  LG  +    +  +  ++GF    +  V + LIDMY+
Sbjct: 261  ERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYA 320

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G+++ A +VF +   + + S++ MI+GFA++G    A+ LF E+L+T  +P+ +TF  
Sbjct: 321  KCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIG 380

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +L AC ++G+VE+G + F  M   + + P+ +HY+CMVDLLG+AG L+EA + ++ MP  
Sbjct: 381  VLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMN 440

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            P   +WGALLG+CRIHG+ + A+IA+  LF+LEP    NY L+ N+ A + RW+DV ++R
Sbjct: 441  PHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVR 500

Query: 930  HSMDEVGVKSVLVWSWIQIDQ-IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
              M   G+K     SW++  + I+H F A    HP + EI   L  L+  +K LGY P+ 
Sbjct: 501  KLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNL 560

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
              V  DI +EEK ++L+SH+EKLA+ +GL+ T +   IR++KN R+C DCH+     S +
Sbjct: 561  SSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQI 620

Query: 1049 RGREIFLRDGARFHHFREGECSCNDCW 1075
             GREI +RD  RFHHFR+G CSC + W
Sbjct: 621  TGREIVVRDNMRFHHFRDGRCSCGNFW 647



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 205/432 (47%), Gaps = 24/432 (5%)

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR-DVESAN 349
           I  SR++++ L  CT +       +VHA + ++G +    +   L+    K    ++   
Sbjct: 37  ILESRLVSV-LHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYP 92

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           +L  +  +  +  LW  +I        +  ++ L+  M+      +S T   +L+AC+  
Sbjct: 93  RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152

Query: 410 GAFHEGKQIHGY-VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
              + G+Q+H   +L     S+L V N LI MY +   L    RVFD M D ++ SW S+
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           I +Y  +G ++ A  LF+ +       D++ W  +++G+  +   +  L +   MQ+ G 
Sbjct: 213 IVAYAKVGNMEAASELFDGLP----MKDMVAWTAMVTGYAQNARPREALEVFERMQAAGV 268

Query: 529 RPNGSSVSVVLQAVTELRLLKYGR------ESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           + +  ++  V+ A  +L   KY        E  G+    G   ++ VG++L+DMY K   
Sbjct: 269 KTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGF----GPTSNVVVGSALIDMYAKCGS 324

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           +++A +VF+ M+ RN+ +++S+I G+   GL   A ++ ++M + EIKP+ V++  +++ 
Sbjct: 325 VEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTA 384

Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S  G  ++   +   M+   G+ P+   +  ++    +     E+L     M    + P
Sbjct: 385 CSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMM---PMNP 441

Query: 702 NSTTMSSLLQTC 713
           +     +LL  C
Sbjct: 442 HGGVWGALLGAC 453



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 136/280 (48%), Gaps = 36/280 (12%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA-S 319
           W++ +  Y +  G   E + ++  +  +G+   S   T +LK C+  +   LG +VH  +
Sbjct: 107 WTALIRGY-ALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQT 165

Query: 320 LIKRGFDFDVHLKCALMNFYGKC---------------RDV----------------ESA 348
           ++  GF  D+++   L++ Y KC               RDV                E+A
Sbjct: 166 ILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAA 225

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
           ++LF  +  ++D + W  ++    +N +   A+++F  MQ +  K    T+V ++ ACA+
Sbjct: 226 SELFDGLP-MKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQ 284

Query: 409 VGAFHEGKQIHGYVLKSAL--ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           +GA      +     +S     SN+ V + LI MY++   +E A +VF+ M++ N+ S++
Sbjct: 285 LGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYS 344

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           SMI  +   G    A  LF++M  + I+P+ +T+  +L+ 
Sbjct: 345 SMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTA 384



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 14/258 (5%)

Query: 691 FIQMQQEDIKPNSTTM------SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
           + Q+Q +   P S         S L+    G   +   K++H    + G  +  +V   L
Sbjct: 18  YCQLQTQSFIPFSVRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKL 77

Query: 745 IDMYSKSGNLKSA--REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
           +   +K         R VF++        W  +I G+A+ G   E++LL++ +   G  P
Sbjct: 78  LRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGP 137

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + TFTALL AC  +  V  G +              +   + ++D+  K G L      
Sbjct: 138 VSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRV 197

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNR 921
              M    D   W +L+ +    G++E    A+  LF   P  +   +  M+   A + R
Sbjct: 198 FDEM-LDRDVISWTSLIVAYAKVGNME----AASELFDGLPMKDMVAWTAMVTGYAQNAR 252

Query: 922 WEDVERLRHSMDEVGVKS 939
             +   +   M   GVK+
Sbjct: 253 PREALEVFERMQAAGVKT 270


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like
            [Glycine max]
          Length = 722

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 240/722 (33%), Positives = 378/722 (52%), Gaps = 52/722 (7%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            +T   +L+AC        GK +H    KS +  +  + N    +YS+   L  A   FD 
Sbjct: 10   QTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDL 69

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
             +  N+ S+N++I++Y     + +A  +F+++     QPDI+++N L++ +   G  +  
Sbjct: 70   TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIP----QPDIVSYNTLIAAYADRGECRPA 125

Query: 517  LTLLRGMQSLGFRPNGSSVS-VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            L L   ++ L F  +G ++S V++    ++ L+   R+ H +++  G D    V  +++ 
Sbjct: 126  LRLFAEVRELRFGLDGFTLSGVIIACGDDVGLV---RQLHCFVVVCGYDCYASVNNAVLA 182

Query: 576  MYVKNDCLQNAQEVFDNMK---NRNIVAWNSLI--SGYCFKGLFVNAKKMLNQMEEEEIK 630
             Y +   L  A+ VF  M     R+ V+WN++I   G   +GL   A ++  +M    +K
Sbjct: 183  CYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGL--EAVELFREMVRRGLK 240

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY------------------------- 665
             D+ +  S+++ ++        +     M  SG +                         
Sbjct: 241  VDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRK 300

Query: 666  -------PNVVTWTSLISGSLQNENYRES-LKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
                   P++V W ++ISG  Q E+  E  +  F +MQ     P+  +   +   C  L 
Sbjct: 301  VFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLS 360

Query: 718  LLQNGKEIHCLCLKNGFIKD-AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
                GK++H L +K+    +   V   L+ MYSK GN+  AR VF       + S N MI
Sbjct: 361  SPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMI 420

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G+A +G   E++ LF  +L+    P+ ITF A+L+AC ++G VEEG KYF+ M   + I
Sbjct: 421  AGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRI 480

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P  EHYSCM+DLLG+AG L EA   I TMPF P +  W  LLG+CR HG++E A  A+ 
Sbjct: 481  EPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAAN 540

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
               +LEP N+A Y ++ N+ A + RWE+   ++  M E GVK     SWI+ID+ VHVF 
Sbjct: 541  EFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFV 600

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVY---QDIDEEEKGKVLLSHTEKLAI 1013
            AE   HP   EI+  +  ++ +MK+ GYVPD R      ++++ +EK + LL H+EKLA+
Sbjct: 601  AEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAV 660

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +GL+ T+   PI V+KN R+C DCH A K +S + GREI +RD  RFH F+EG CSC D
Sbjct: 661  AFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGD 720

Query: 1074 CW 1075
             W
Sbjct: 721  YW 722



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 183/404 (45%), Gaps = 42/404 (10%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL--EDDLLWNEIIMVKL 372
           ++H  ++  G+D    +  A++  Y +   +  A ++F E+ +    D++ WN +I+   
Sbjct: 160 QLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACG 219

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           ++ +   A++LFREM     K    T+  +L A   V     G Q HG ++KS    N  
Sbjct: 220 QHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSH 279

Query: 433 VCNCLISMYSR-NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           V + LI +YS+    +    +VF+ +   +L  WN+MIS ++   Y D++          
Sbjct: 280 VGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFS--QYEDLS---------- 327

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                                 ++ +   R MQ  GF P+  S   V  A + L     G
Sbjct: 328 ----------------------EDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVG 365

Query: 552 RESHGYILRNGLDYD-LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           ++ H   +++ + Y+ + V  +L+ MY K   + +A+ VFD M   N+V+ NS+I+GY  
Sbjct: 366 KQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQ 425

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVV 669
            G+ V + ++   M +++I P+ +++ +++S     G+ +E     + MK    I P   
Sbjct: 426 HGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAE 485

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            ++ +I    +    +E+ +    M      P S   ++LL  C
Sbjct: 486 HYSCMIDLLGRAGKLKEAERIIETMP---FNPGSIEWATLLGAC 526



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 120/233 (51%), Gaps = 4/233 (1%)

Query: 277 ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALM 336
           E +E++ E+  +G+      +  +L   T +     G++ H  +IK GF  + H+   L+
Sbjct: 226 EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLI 285

Query: 337 NFYGKCRD-VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW-ENAIKLFREMQFSSAKA 394
           + Y KC   +    K+F E++   D +LWN +I    + E   E+ I  FREMQ +    
Sbjct: 286 DLYSKCAGGMVECRKVFEEIA-APDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHP 344

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN-LSVCNCLISMYSRNNKLELATRV 453
              + V +  AC+ + +   GKQ+H   +KS +  N +SV N L++MYS+   +  A RV
Sbjct: 345 DDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRV 404

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           FD+M +HN+ S NSMI+ Y   G    +  LF  M    I P+ IT+  +LS 
Sbjct: 405 FDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSA 457



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/320 (20%), Positives = 133/320 (41%), Gaps = 7/320 (2%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H  MIK G   NS      +  +    G      K F    +     W++ +  +  +  
Sbjct: 266 HGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYED 325

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD-VHLK 332
             ++ +  + E+   G          +   C+ L +  +G +VHA  IK    ++ V + 
Sbjct: 326 LSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVN 385

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  Y KC +V  A ++F  + +  + +  N +I    ++     +++LF  M     
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPE-HNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDI 444

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELAT 451
              + T + +L AC   G   EG++    + +   +E      +C+I +  R  KL+ A 
Sbjct: 445 APNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAE 504

Query: 452 RVFDSMKDHNLS-SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           R+ ++M  +  S  W +++ +    G V++A    N+    +++P       +LS  +  
Sbjct: 505 RIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEF--LQLEPYNAAPYVMLSNMYAS 562

Query: 511 GS-YQNVLTLLRGMQSLGFR 529
            + ++   T+ R M+  G +
Sbjct: 563 AARWEEAATVKRLMRERGVK 582


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 250/780 (32%), Positives = 391/780 (50%), Gaps = 105/780 (13%)

Query: 391  SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN--------------- 435
            +A A++R   + ++ACA     HE K +H  + +S    N  + N               
Sbjct: 2    AAAALARRFEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAA 61

Query: 436  ----------------CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
                            C+I  Y  ++++  A  +FDSM   +  +WN MI++Y  +  +D
Sbjct: 62   RAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLD 121

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV-- 537
             A  LF+ M S R   D+++W  L++G+  H   +    L R M      P   +V+   
Sbjct: 122  DARELFHGMISGR---DVVSWAILVAGYARHDRLEEASALFRRM------PLWDTVTCTS 172

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            VLQ       L   +E    I   G D D     +++  Y KN  +  A+ +F  +K RN
Sbjct: 173  VLQGYAHNGHLAEAQELFDRIGGAG-DRDATACNAMIAAYGKNARVDLAEGLFAQIKLRN 231

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQM----------------EEEEIKP---------- 631
              +W+ L+  Y   G    AKK  ++M                ++ E++           
Sbjct: 232  AASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSA 291

Query: 632  -DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV--------------------- 669
             D+++WN+L+ GYS  G   E   +   M++  +   VV                     
Sbjct: 292  VDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVL 351

Query: 670  ---------TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                     +WT++I+   QN N  E++  F  M  E  +P+  T+ S++ +C  LG L 
Sbjct: 352  DAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLS 411

Query: 721  NGKEIHCLCLKNG-FIKDAYVATGLIDMYSKSGNLKSAREVFRKSA--NKTLASWNCMIM 777
             GK IH     +  F +   +   +I MY K GNL+ AREVF       +++ +W  MI 
Sbjct: 412  LGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIR 471

Query: 778  GFAIYGNGKEAILLFHEL-LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             +A  G G+EAI LF E+ ++ G +P+ +TF ++L+AC + G +E+ W++F SM  D+ +
Sbjct: 472  AYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGV 531

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFI-RTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
             P  +HY C+VDLLG+AG L EA   + R   F+ D   W A L +C+++G LE ++ A+
Sbjct: 532  PPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAA 591

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            +R+ +LEP N A   L+ N+ A   R  DV R+R+ M   GVK     SWI+I+  VH F
Sbjct: 592  KRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEF 651

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                  HP   EIY EL  L  E+K+ GYVPDT+ V +D+DEE+K ++L  H+E+LA+  
Sbjct: 652  MVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMAL 711

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            G++ T     +RV+KN RVCSDCH A K++S + GR+I +RD +RFHHF++G CSC D W
Sbjct: 712  GIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 115/543 (21%), Positives = 222/543 (40%), Gaps = 87/543 (16%)

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
           FD      ++  Y +   ++ A +LF  +    D + W  ++    R+++ E A  LFR 
Sbjct: 102 FDAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEEASALFRR 161

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M        + T   +LQ  A  G   E +++   +   A + + + CN +I+ Y +N +
Sbjct: 162 MPLWD----TVTCTSVLQGYAHNGHLAEAQELFDRI-GGAGDRDATACNAMIAAYGKNAR 216

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++LA  +F  +K  N +SW+ ++ +Y   G++D+A   F++M     Q D I +  + + 
Sbjct: 217 VDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMP----QRDSIAFTAMTAV 272

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
               G  +    +LR + ++       + + +L+  +    L   R     +    +   
Sbjct: 273 LSDQGELRGAREMLRYLSAVDV----IAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATT 328

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           +  GT L+++Y K   + +A+ V D M  R  V+W ++I+ Y   G    A  +   M+ 
Sbjct: 329 VVAGT-LVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDL 387

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP-------------------- 666
           E  +P  ++  S+V   ++ G       I   +++S ++                     
Sbjct: 388 EGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLE 447

Query: 667 --------------NVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQ 711
                         +VVTWT++I    QN    E+++ F +M  +   +PN  T  S+L 
Sbjct: 448 LAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLS 507

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIK---DAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            C  LG L+   E  C    +  +    D Y    L+D+  ++G L  A           
Sbjct: 508 ACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCC--LVDLLGRAGRLGEA----------- 554

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
                             E +LL H+     F+ D + + A L+AC+ +G +E   +   
Sbjct: 555 ------------------EKLLLRHK----DFEADVVCWIAFLSACQMNGDLERSQRAAK 592

Query: 829 SMS 831
            +S
Sbjct: 593 RVS 595



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 14/307 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + G    A +       R+   W++ +  Y    G   E + ++  +  +G  
Sbjct: 333 TLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQ-NGNAAEAINLFQCMDLEGAE 391

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRG-FDFDVHLKCALMNFYGKCRDVESANK 350
                L  ++  C  L    LG  +HA +     F   + L  A++  YGKC ++E A +
Sbjct: 392 PSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELARE 451

Query: 351 LFSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAK 408
           +F  V       + W  +I    +N   E AI+LF+EM        +R T + +L AC+ 
Sbjct: 452 VFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSH 511

Query: 409 VGAFHEGKQIHGYVLKSAL---ESNLSVCNCLISMYSRNNKLELATRVFDSMKD--HNLS 463
           +G   +  + H   +        +    C CL+ +  R  +L  A ++    KD   ++ 
Sbjct: 512 LGQLEQAWE-HFCSMGPDFGVPPAGDHYC-CLVDLLGRAGRLGEAEKLLLRHKDFEADVV 569

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRG 522
            W + +S+    G  D+  S       S ++P+ +    LLS  +   G   +V  +   
Sbjct: 570 CWIAFLSACQMNG--DLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNE 627

Query: 523 MQSLGFR 529
           M+S G +
Sbjct: 628 MKSSGVK 634


>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Glycine max]
          Length = 607

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 236/640 (36%), Positives = 341/640 (53%), Gaps = 49/640 (7%)

Query: 439  SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            SM     +  L  R+  S  +H +S   +   S +  G ++ A  LF  + +    PD  
Sbjct: 14   SMAEVKQQHSLLLRLGLSTNNHAMSRIFT-FCSLSKHGDINYALKLFTTLPN----PDTF 68

Query: 499  TWNCLLSGHFTHGSYQNV-LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
             +N L    F+     ++ L     M      PN  +   +++A    +L +  ++ H +
Sbjct: 69   LYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRAC---KLEEEAKQLHAH 125

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
            +L+ G   D Y   +L+ +Y     L +A+ VF  M +                      
Sbjct: 126  VLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSD---------------------- 163

Query: 618  KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                         P++VSW SLVSGYS WG   EA  +   M       N V+W ++I+ 
Sbjct: 164  -------------PNVVSWTSLVSGYSQWGLVDEAFRVFELMPCK---KNSVSWNAMIAC 207

Query: 678  SLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
             ++   +RE+   F +M+ E  ++ +    +++L  C G+G L+ G  IH    K G + 
Sbjct: 208  FVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVL 267

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
            D+ +AT +IDMY K G L  A  VF     K ++SWNCMI GFA++G G++AI LF E+ 
Sbjct: 268  DSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEME 327

Query: 797  ETGF-QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
            E     PD+ITF  +L AC +SGLVEEGW YF  M   + I PT EHY CMVDLL +AG 
Sbjct: 328  EEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGR 387

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L+EA   I  MP  PDA + GALLG+CRIHG+LE  E    R+ +L+P NS  Y ++ N+
Sbjct: 388  LEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNM 447

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A   +WE V  +R  MD+ GVK    +S I+++ +V+ F A G  HP    IY ++Y +
Sbjct: 448  YASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEM 507

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
            +  ++ +G+VPDT  V  D+ EEE+   L  H+EKLAI YGL+KTK    +RV KN RVC
Sbjct: 508  LESIRVVGFVPDTDGVLHDLVEEERENPLFYHSEKLAIAYGLLKTKRGETLRVTKNLRVC 567

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH A+K +S V   +I +RD +RFHHF  GECSC D W
Sbjct: 568  KDCHQASKMISKVYDCDIIIRDRSRFHHFSNGECSCKDYW 607



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 195/429 (45%), Gaps = 44/429 (10%)

Query: 317 HASLIKRGFDFDVHLKCALMNF--YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           H+ L++ G   + H    +  F    K  D+  A KLF+ + +  D  L+N         
Sbjct: 22  HSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPN-PDTFLYN--------- 71

Query: 375 EKWENAIKLFREMQFSSAKAISRTIV---KMLQACAKVGAF------------HEGKQIH 419
                   LF+   FS ++  S +++    MLQ C    AF             E KQ+H
Sbjct: 72  -------TLFKAF-FSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEEEAKQLH 123

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            +VLK     +    N LI +Y     L+ A RVF +M D N+ SW S++S Y+  G VD
Sbjct: 124 AHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVD 183

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVV 538
            A+ +F  M   +   + ++WN +++       ++    L R M+       +    + +
Sbjct: 184 EAFRVFELMPCKK---NSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATM 240

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           L A T +  L+ G   H Y+ + G+  D  + T+++DMY K  CL  A  VF  +K + +
Sbjct: 241 LSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRV 300

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEE-IKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
            +WN +I G+   G   +A ++  +MEEE  + PD +++ ++++  +  G  +E      
Sbjct: 301 SSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFR 360

Query: 658 HMKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
           +M +  GI P    +  ++    +     E+ K   +M    + P++  + +LL  C   
Sbjct: 361 YMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMP---MSPDAAVLGALLGACRIH 417

Query: 717 GLLQNGKEI 725
           G L+ G+E+
Sbjct: 418 GNLELGEEV 426



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 143/346 (41%), Gaps = 42/346 (12%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYL-EFGDFTSAAKAFFLYFSRSYADWSSFL 265
           ++ VK +H+ ++++G   N+  M +   F  L + GD   A K F    +     +++  
Sbjct: 15  MAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYNTLF 74

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
           + + S        L  +  +    V   +     +++ C KL       ++HA ++K GF
Sbjct: 75  KAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRAC-KLEE--EAKQLHAHVLKFGF 131

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSD-----------------LEDDLL----- 363
             D +    L++ Y     ++ A ++F  +SD                 L D+       
Sbjct: 132 GGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFEL 191

Query: 364 ---------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK-MLQACAKVGAFH 413
                    WN +I   ++  ++  A  LFR M+      + R +   ML AC  VGA  
Sbjct: 192 MPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALE 251

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           +G  IH YV K+ +  +  +   +I MY +   L+ A  VF  +K   +SSWN MI  + 
Sbjct: 252 QGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFA 311

Query: 474 GLGYVDVAWSLFNKM-NSSRIQPDIITW-----NCLLSGHFTHGSY 513
             G  + A  LF +M   + + PD IT+      C  SG    G Y
Sbjct: 312 MHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWY 357



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 135/330 (40%), Gaps = 39/330 (11%)

Query: 165 NSITNSPTSLALPPTDTLAKQAQL--SCIS-SGFCFLNETNKFRCLSSVKSKHAQMIKMG 221
           N++  +  SL+  P+ +L   + +   C++ + F F +     +     K  HA ++K G
Sbjct: 71  NTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEEEAKQLHAHVLKFG 130

Query: 222 KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELL 279
                   + +LI  Y  FG    A + F      +   W+S +  Y  +G   E   + 
Sbjct: 131 -FGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVF 189

Query: 280 EV---------WGELHG---KGVIFRSR------------------ILTIILKLCTKLMA 309
           E+         W  +     KG  FR                    +   +L  CT + A
Sbjct: 190 ELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGA 249

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
              G+ +H  + K G   D  L   +++ Y KC  ++ A  +F  +  ++    WN +I 
Sbjct: 250 LEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLK-VKRVSSWNCMIG 308

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAI-SRTIVKMLQACAKVGAFHEGKQIHGYVLK-SAL 427
               + K E+AI+LF+EM+  +  A  S T V +L ACA  G   EG     Y++    +
Sbjct: 309 GFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGI 368

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           +       C++ + +R  +LE A +V D M
Sbjct: 369 DPTKEHYGCMVDLLARAGRLEEAKKVIDEM 398


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 577

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/577 (37%), Positives = 316/577 (54%), Gaps = 38/577 (6%)

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---------- 579
            P+ +S S++L++       + G   H  I++ G +YD+ + T L+D Y K          
Sbjct: 8    PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRV 67

Query: 580  ------NDCLQN---------------AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
                   D + N               A+ +FDNM  RN  +WNS+I+ YC  G   +A+
Sbjct: 68   FMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSAR 127

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
             M +      +K D+VSWN+++ GY    +SK+ +         G   N VTW ++IS  
Sbjct: 128  LMFDC---NPVK-DVVSWNAIIDGYC---KSKQLVAAQELFLLMGSARNSVTWNTMISAY 180

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            +Q   +  ++  F QMQ E++KP   TM SLL  C  LG L  G+ IH          D 
Sbjct: 181  VQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDV 240

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
             +   LIDMY K G L++A +VF   + K +  WN +I+G  + G G+EAI  F  + + 
Sbjct: 241  VLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKE 300

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            G +PD +TF  +L+ C +SGL+  G +YF  M   Y + P +EHY CMVDLLG+AGYL E
Sbjct: 301  GIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKE 360

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A + IR MP KP++ + G+LL +C+IH   +  E  +++L +L+PC+  NY  + NL A 
Sbjct: 361  ALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYAS 420

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
             +RW+DV   R  M + GV      S I+++ IVH F A    HP   +I   L  +  E
Sbjct: 421  LSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKE 480

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
            +K  G+VP+T  V  DI+EEEK   +  H+E++A+ +GLM T     IRV+KN R CSDC
Sbjct: 481  LKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDC 540

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H+A K +S    REI +RD  RFHHFR G CSCND W
Sbjct: 541  HSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 184/418 (44%), Gaps = 47/418 (11%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            ++IL+ C       LG   H  ++K GF++D+ L+  L++FY K  D++ A ++F    
Sbjct: 13  FSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVF---- 68

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
                      + +  R+    NA                     M+ A +K G   E +
Sbjct: 69  -----------MGMPRRDVVANNA---------------------MISALSKHGYVEEAR 96

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +      +  E N    N +I+ Y +   +  A  +FD     ++ SWN++I  Y    
Sbjct: 97  NL----FDNMTERNSCSWNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSK 152

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
            +  A  LF  M S+R   + +TWN ++S +   G +   +++ + MQS   +P   ++ 
Sbjct: 153 QLVAAQELFLLMGSAR---NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMV 209

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +L A   L  L  G   HGYI    L  D+ +G +L+DMY K   L+ A +VF  +  +
Sbjct: 210 SLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRK 269

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           NI  WNS+I G    G    A      ME+E IKPD V++  ++SG S  G         
Sbjct: 270 NIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYF 329

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             M    G+ P V  +  ++    +    +E+L+    M    +KPNS  + SLL+ C
Sbjct: 330 SEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMP---MKPNSMVLGSLLRAC 384



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 22/299 (7%)

Query: 214 HAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
           H Q++KMG  +   DM+    L+  Y + GD   A + F     R     ++ +    S 
Sbjct: 33  HCQIMKMGFEY---DMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISAL-SK 88

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF---- 327
            G V+E   ++  +  +     + ++T   KL         G    A L+   FD     
Sbjct: 89  HGYVEEARNLFDNMTERNSCSWNSMITCYCKL---------GDINSARLM---FDCNPVK 136

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           DV    A+++ Y K + + +A +LF  +    + + WN +I   ++  ++  AI +F++M
Sbjct: 137 DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQM 196

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
           Q  + K    T+V +L ACA +GA   G+ IHGY+    L+ ++ + N LI MY +   L
Sbjct: 197 QSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGAL 256

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           E A  VF  +   N+  WNS+I      G  + A + F  M    I+PD +T+  +LSG
Sbjct: 257 EAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSG 315



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 9/188 (4%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M + D+ P+ T+ S +L++C   G  Q G+  HC  +K GF  D  + TGL+D Y+K G+
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           LK A+ VF     + + + N MI   + +G  +EA  LF  + E     ++ ++ +++  
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITC 116

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
               G +      FD      N +  +  ++ ++D   K+  L  A +    M    ++ 
Sbjct: 117 YCKLGDINSARLMFDC-----NPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSV 171

Query: 874 IWGALLGS 881
            W  ++ +
Sbjct: 172 TWNTMISA 179


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 242/804 (30%), Positives = 403/804 (50%), Gaps = 86/804 (10%)

Query: 313  GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            G  +H  ++K G   D+  +  L+N Y     +E A+KLF E+       L N +  V L
Sbjct: 22   GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMP------LTNTVSFVTL 75

Query: 373  -----RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
                 R+ +++ A +L   +     +        +L+    +        +H YV K   
Sbjct: 76   AQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGH 135

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            +++  V   LI  YS    ++ A +VFD +   ++ SW  M++ Y               
Sbjct: 136  QADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY--------------- 180

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
                             + ++ H   ++ L L   M+ +G+RPN  ++S  L++   L  
Sbjct: 181  -----------------AENYCH---EDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEA 220

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
             K G+  HG  L+   D DLYVG +L+++Y K+  +  AQ+ F+ M   +++ W+ +IS 
Sbjct: 221  FKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISR 280

Query: 608  YCFKGLFVNAKKMLNQMEEEEI------------------------------------KP 631
            Y        A ++  +M +  +                                      
Sbjct: 281  YAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDS 340

Query: 632  DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
            ++   N+L+  Y+  G+ + ++ +           N V W ++I G +Q  +  ++L  F
Sbjct: 341  NVFVSNALMDVYAKCGEIENSVKLF----TGSTEKNEVAWNTIIVGYVQLGDGEKALNLF 396

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
              M   DI+P   T SS+L+    L  L+ G++IH L +K  + KD+ VA  LIDMY+K 
Sbjct: 397  SNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKC 456

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G +  AR  F K   +   SWN +I G++I+G G EA+ LF  + ++  +P+ +TF  +L
Sbjct: 457  GRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVL 516

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            +AC N+GL+++G  +F SM  DY I P IEHY+CMV LLG++G  DEA   I  +PF+P 
Sbjct: 517  SACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPS 576

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
              +W ALLG+C IH +L+  ++ ++R+ ++EP + A + L+ N+ A + RW++V  +R +
Sbjct: 577  VMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKN 636

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M +  VK     SW++   +VH F+     HP    I+  L  L  + +  GYVPD   V
Sbjct: 637  MKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVV 696

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D++++EK ++L  H+E+LA+ +GL++  S   IR+IKN R+C DCH   K +S +  R
Sbjct: 697  LLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQR 756

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD  RFHHFR+G CSC D W
Sbjct: 757  EIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 155/642 (24%), Positives = 261/642 (40%), Gaps = 115/642 (17%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           KS H  ++K G   + D   ++++ + Y+ FG    A+K   L+      +  SF+   +
Sbjct: 23  KSLHCHILKHGA--SLDLFAQNILLNTYVHFGFLEDASK---LFDEMPLTNTVSFVTLAQ 77

Query: 270 SFG--GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
            F    + Q    +   L  +G      + T +LKL   +      + VHA + K G   
Sbjct: 78  GFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQA 137

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           D  +  AL++ Y  C +V++A ++F  +   +D + W  ++     N   E+++ LF +M
Sbjct: 138 DAFVGTALIDAYSVCGNVDAARQVFDGIY-FKDMVSWTGMVACYAENYCHEDSLLLFCQM 196

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
           +    +  + TI   L++C  + AF  GK +HG  LK   + +L V   L+ +Y+++ ++
Sbjct: 197 RIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEI 256

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
             A + F+ M   +L  W+ MIS Y        A  LF +M  S +              
Sbjct: 257 AEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSV-------------- 302

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                                 PN  + + VLQA   L LL  G + H  +L+ GLD ++
Sbjct: 303 --------------------VVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNV 342

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           +V  +LMD+Y K   ++N+ ++F     +N VAWN++I GY   G    A  + + M   
Sbjct: 343 FVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGL 402

Query: 628 EIKP-----------------------------------DLVSWNSLVSGYSIWGQSKEA 652
           +I+P                                   D V  NSL+  Y+  G+  +A
Sbjct: 403 DIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDA 462

Query: 653 LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
            +    M       + V+W +LI G   +    E+L  F  MQQ + KPN  T   +L  
Sbjct: 463 RLTFDKMDKQ----DEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSA 518

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
           C   GLL  G+                             + KS  + +       +  +
Sbjct: 519 CSNAGLLDKGR----------------------------AHFKSMLQDY--GIEPCIEHY 548

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            CM+      G   EA+ L  E+    FQP  + + ALL AC
Sbjct: 549 TCMVWLLGRSGQFDEAVKLIGEI---PFQPSVMVWRALLGAC 587



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 234/528 (44%), Gaps = 79/528 (14%)

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           S +   MLQ   +    + GK +H ++LK     +L   N L++ Y     LE A+++FD
Sbjct: 3   SHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFD 62

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            M   N  S+ ++   ++                                   +H  +Q 
Sbjct: 63  EMPLTNTVSFVTLAQGFSR----------------------------------SH-QFQR 87

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
              LL  +   G+  N    + +L+ +  + L       H Y+ + G   D +VGT+L+D
Sbjct: 88  ARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALID 147

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS----GYCFKG---LFVN------------ 616
            Y     +  A++VFD +  +++V+W  +++     YC +    LF              
Sbjct: 148 AYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFT 207

Query: 617 ---AKKMLNQMEEEEI-------------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
              A K  N +E  ++               DL    +L+  Y+  G+  EA      M 
Sbjct: 208 ISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMP 267

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLL 719
              + P    W+ +IS   Q++  +E+L+ F +M+Q   + PN+ T +S+LQ C  L LL
Sbjct: 268 KDDLIP----WSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLL 323

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             G +IH   LK G   + +V+  L+D+Y+K G ++++ ++F  S  K   +WN +I+G+
Sbjct: 324 NLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGY 383

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD-SMSTDYNIIP 838
              G+G++A+ LF  +L    QP  +T++++L A  +   +E G +    ++ T YN   
Sbjct: 384 VQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDS 443

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            +   + ++D+  K G +D+A      M  K D   W AL+    IHG
Sbjct: 444 VVA--NSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALICGYSIHG 488


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/695 (33%), Positives = 371/695 (53%), Gaps = 70/695 (10%)

Query: 411  AFHEGKQIHGYVLKSALESNLSVCNCLISMYS--RNNKLELATRVFDSMKDHNLSSWNSM 468
            A  E +Q+H + LK+A+ ++  V + L+++YS  + N L  A  +FD ++  +L  WN++
Sbjct: 25   APQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTI 84

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            I  Y    +      LF+++    + PD  T  C++ G                      
Sbjct: 85   IKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKG---------------------- 121

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
                            L +++ G++ HG  L+ G   D++V  SL++MY K   +  A++
Sbjct: 122  -------------CARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARK 168

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI------------------- 629
            VFD M ++++V WNSLI GY   G    A ++  +M E +                    
Sbjct: 169  VFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESA 228

Query: 630  ------KP--DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                   P  +LVSWN++++GY   G    AL + + M    I+ ++VTW  +I+G   N
Sbjct: 229  RKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMP---IW-DLVTWNLMIAGYELN 284

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
              + +++K F  M +   +P+  T+ S+L    GL +L  G+ IH    KNGF  D  + 
Sbjct: 285  GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG 344

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            T LI+MY+K G ++SA  VFR    K +  W  +I+G  I+G    A+ LF E+ +TG +
Sbjct: 345  TSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLK 404

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+AI F  +L AC ++GLV++G +YFD M  +Y I PT+EHY C+VD+L +AG+L+EA +
Sbjct: 405  PNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKN 464

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
             I  MP  P+  IW +LLG  R HG ++  E A++R+ ++ P     Y L+ N+ A S  
Sbjct: 465  TIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGM 524

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            WE V  +R  M + G +     S ++    +H F      HP T EIY ++  +  ++K 
Sbjct: 525  WEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKC 584

Query: 982  LGYVPDTRCVYQDID-EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            +G+VPDT  V   I+ E+EK   L +H+E+LAI +GL+  K   PIR++KN RVC+DCH+
Sbjct: 585  VGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHS 644

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              K +S +  REI +RD  RFHHF+ G CSC D W
Sbjct: 645  VTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 191/420 (45%), Gaps = 87/420 (20%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  ++K C +L     G ++H   +K GF  DV ++ +L+N Y KC +++ A K+F  + 
Sbjct: 115 LPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMI 174

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D +D +LWN +I    R  + + A++LF EM      A S T+                 
Sbjct: 175 D-KDVVLWNSLIDGYARCGEIDIALQLFEEM--PERDAFSWTV----------------- 214

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
                               L+   S+  K+E A ++FD M   NL SWN+MI+ Y   G
Sbjct: 215 --------------------LVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSG 254

Query: 477 YVDVAWSLFNKMNSSRIQP--DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
             D A  LF +M      P  D++TWN +++G+  +G + + + +   M  LG RP+ ++
Sbjct: 255 DFDSALELFYQM------PIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHAT 308

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
           +  VL AV+ L +L  GR  H Y+ +NG + D  +GTSL++MY K  C+++A  VF  ++
Sbjct: 309 LVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ 368

Query: 595 NRNIVAWNSLISG----------------YCFKGLFVNAKKMLN---------------- 622
            + +  W ++I G                 C  GL  NA   +                 
Sbjct: 369 KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ 428

Query: 623 ----QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                M E +I+P L  +  LV      G  +EA   I +M    I PN V W SL+ GS
Sbjct: 429 YFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMP---ISPNKVIWMSLLGGS 485



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 175/422 (41%), Gaps = 64/422 (15%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYF 254
           C +    +   +   K  H   +K+G  + SD  V+ SL+  Y + G+   A K F    
Sbjct: 117 CVIKGCARLGVVQEGKQIHGLALKIG--FGSDVFVQGSLVNMYSKCGEIDCARKVFDGMI 174

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            +    W+S ++ Y    GE+   L+++ E+  +   F   +L   L  C K+ +     
Sbjct: 175 DKDVVLWNSLIDGYARC-GEIDIALQLFEEMPERDA-FSWTVLVDGLSKCGKVES----- 227

Query: 315 EVHASLIKRGFDFDVHLKC-------ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
                  ++ FD    + C       A++N Y K  D +SA +LF ++  + D + WN +
Sbjct: 228 ------ARKLFD---QMPCRNLVSWNAMINGYMKSGDFDSALELFYQMP-IWDLVTWNLM 277

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I     N ++ +A+K+F  M    ++    T+V +L A + +    +G+ IH Y+ K+  
Sbjct: 278 IAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGF 337

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           E +  +   LI MY++   +E A  VF +++   +  W ++I    GLG           
Sbjct: 338 ELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAII---VGLG----------- 383

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
                                 HG   + L L   M   G +PN      VL A     L
Sbjct: 384 ---------------------IHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGL 422

Query: 548 LKYGRESHGYILRN-GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLI 605
           +  GR+    ++    ++  L     L+D+  +   L+ A+   +NM  + N V W SL+
Sbjct: 423 VDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLL 482

Query: 606 SG 607
            G
Sbjct: 483 GG 484



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 9/309 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y++ GDF SA + F+         W+  +  YE   G+  + ++++  +   G  
Sbjct: 245 AMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYE-LNGQFMDAVKMFFMMLKLGSR 303

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  +L   + L     G  +H+ + K GF+ D  L  +L+  Y KC  +ESA  +
Sbjct: 304 PSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTV 363

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +   +    W  II+    +    +A+ LF EM  +  K  +   + +L AC   G 
Sbjct: 364 FRAIQKKKVG-HWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGL 422

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             +G+Q    ++    +E  L    CL+ +  R   LE A    ++M    N   W S++
Sbjct: 423 VDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLL 482

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGF 528
                 G +D+    +       + P+ I    LLS  +   G ++ V  +   M   GF
Sbjct: 483 GGSRNHGKIDIGE--YAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGF 540

Query: 529 R--PNGSSV 535
           R  P  SSV
Sbjct: 541 RKDPGCSSV 549



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 49/256 (19%)

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS--KSGNLKSAREVFRKSANKTLASW 772
           GL   Q  +++H   LK       +V++ L+ +YS  K  +L  AR +F +   ++L  W
Sbjct: 22  GLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHW 81

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG--------- 823
           N +I  +       + I+LFHEL+   + PD  T   ++  C   G+V+EG         
Sbjct: 82  NTIIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALK 140

Query: 824 --------------------------WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
                                      K FD M  D +++     ++ ++D   + G +D
Sbjct: 141 IGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVL----WNSLIDGYARCGEID 195

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLL 916
            A      MP + DA  W  L+      G +E A    R+LF   PC N  ++N M+N  
Sbjct: 196 IALQLFEEMPER-DAFSWTVLVDGLSKCGKVESA----RKLFDQMPCRNLVSWNAMINGY 250

Query: 917 AMSNRWEDVERLRHSM 932
             S  ++    L + M
Sbjct: 251 MKSGDFDSALELFYQM 266


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/679 (34%), Positives = 366/679 (53%), Gaps = 70/679 (10%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS--RNNKLELATRVFDSM 457
            + + Q C+   A  E +Q+H + LK+A+ ++  V + L+++YS  + N L  A  +FD +
Sbjct: 20   LSLFQTCS---APQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI 76

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            +  +L  WN++I  Y    +      LF+++    + PD  T  C++ G           
Sbjct: 77   QRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKG----------- 124

Query: 518  TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
                                       L +++ G++ HG  L+ G   D++V  SL++MY
Sbjct: 125  ------------------------CARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMY 160

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
             K   +  A++VFD M ++++V WNSLI G                        +LVSWN
Sbjct: 161  SKCGEIDCARKVFDGMIDKDVVLWNSLIDG------------------------NLVSWN 196

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            ++++GY   G    AL + + M    I+ ++VTW  +I+G   N  + +++K F  M + 
Sbjct: 197  AMINGYMKSGDFDSALELFYQMP---IW-DLVTWNLMIAGYELNGQFMDAVKMFFMMLKL 252

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
              +P+  T+ S+L    GL +L  G+ IH    KNGF  D  + T LI+MY+K G ++SA
Sbjct: 253  GSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESA 312

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
              VFR    K +  W  +I+G  I+G    A+ LF E+ +TG +P+AI F  +L AC ++
Sbjct: 313  LTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 372

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLV++G +YFD M  +Y I PT+EHY C+VD+L +AG+L+EA + I  MP  P+  IW +
Sbjct: 373  GLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMS 432

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG  R HG ++  E A++R+ ++ P     Y L+ N+ A S  WE V  +R  M + G 
Sbjct: 433  LLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGF 492

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID- 996
            +     S ++    +H F      HP T EIY ++  +  ++K +G+VPDT  V   I+ 
Sbjct: 493  RKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEG 552

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            E+EK   L +H+E+LAI +GL+  K   PIR++KN RVC+DCH+  K +S +  REI +R
Sbjct: 553  EKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVR 612

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFHHF+ G CSC D W
Sbjct: 613  DNCRFHHFKNGSCSCMDYW 631



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 183/387 (47%), Gaps = 60/387 (15%)

Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV 400
           K  D+  A  +F  +      + WN II   + N+   + I LF E+        + T+ 
Sbjct: 62  KINDLGYARSIFDRIQR-RSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPD-NFTLP 119

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +++ CA++G   EGKQIHG  LK    S++ V   L++MYS+  +++ A +VFD M D 
Sbjct: 120 CVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDK 179

Query: 461 -----------NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP--DIITWNCLLSGH 507
                      NL SWN+MI+ Y   G  D A  LF +M      P  D++TWN +++G+
Sbjct: 180 DVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQM------PIWDLVTWNLMIAGY 233

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
             +G + + + +   M  LG RP+ +++  VL AV+ L +L  GR  H Y+ +NG + D 
Sbjct: 234 ELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDG 293

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG----------------YCFK 611
            +GTSL++MY K  C+++A  VF  ++ + +  W ++I G                 C  
Sbjct: 294 ILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKT 353

Query: 612 GLFVNAKKMLN--------------------QMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
           GL  NA   +                      M E +I+P L  +  LV      G  +E
Sbjct: 354 GLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEE 413

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGS 678
           A   I +M    I PN V W SL+ GS
Sbjct: 414 AKNTIENMP---ISPNKVIWMSLLGGS 437



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 80/355 (22%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  ++K C +L     G ++H   +K GF  DV ++ +L+N Y KC +++ A K+F  + 
Sbjct: 118 LPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMI 177

Query: 357 DLEDDLLWNEII---------MVK--LRNEKWENAIKLFREM------------------ 387
           D +D +LWN +I         M+   +++  +++A++LF +M                  
Sbjct: 178 D-KDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELN 236

Query: 388 -QFSSA--------KAISR----TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            QF  A        K  SR    T+V +L A + +    +G+ IH Y+ K+  E +  + 
Sbjct: 237 GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG 296

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             LI MY++   +E A  VF +++   +  W ++I    GLG                  
Sbjct: 297 TSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAII---VGLG------------------ 335

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
                          HG   + L L   M   G +PN      VL A     L+  GR+ 
Sbjct: 336 --------------IHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQY 381

Query: 555 HGYILRN-GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISG 607
              ++    ++  L     L+D+  +   L+ A+   +NM  + N V W SL+ G
Sbjct: 382 FDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG 436



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 14/323 (4%)

Query: 223 IWNS---DDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQE 277
           +WNS    ++V   ++I  Y++ GDF SA + F+         W+  +  YE   G+  +
Sbjct: 183 LWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYE-LNGQFMD 241

Query: 278 LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
            ++++  +   G       L  +L   + L     G  +H+ + K GF+ D  L  +L+ 
Sbjct: 242 AVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIE 301

Query: 338 FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
            Y KC  +ESA  +F  +   +    W  II+    +    +A+ LF EM  +  K  + 
Sbjct: 302 MYAKCGCIESALTVFRAIQKKKVG-HWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAI 360

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDS 456
             + +L AC   G   +G+Q    ++    +E  L    CL+ +  R   LE A    ++
Sbjct: 361 IFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIEN 420

Query: 457 MK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQ 514
           M    N   W S++      G +D+    +       + P+ I    LLS  +   G ++
Sbjct: 421 MPISPNKVIWMSLLGGSRNHGKIDIGE--YAAQRVIEVAPETIGCYILLSNMYAASGMWE 478

Query: 515 NVLTLLRGMQSLGFR--PNGSSV 535
            V  +   M   GFR  P  SSV
Sbjct: 479 KVSHVREMMYKRGFRKDPGCSSV 501


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/608 (35%), Positives = 329/608 (54%), Gaps = 32/608 (5%)

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            +N L+      G  ++ L L   M  +    P+  +V+  L++ + +  L  GR    Y 
Sbjct: 86   YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 559  LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            ++ GL  D +V +SL+ MY     +  AQ +FD ++   +V WN++I+ Y   G ++   
Sbjct: 146  VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN----------- 667
            +M   M E  +  D ++  S+V+     G +K    +  ++   G+  N           
Sbjct: 206  EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265

Query: 668  --------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                                VV W+++ISG  Q +  RE+L  F +MQ  +++PN  TM 
Sbjct: 266  AKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMV 325

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            S+L  C  LG L+ GK +H    +        + T L+D Y+K G +  A E F     K
Sbjct: 326  SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
               +W  +I G A  G G+EA+ LF  + +   +P  +TF  +L AC +S LVEEG ++F
Sbjct: 386  NSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHF 445

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            DSM+ DY I P  EHY C+VDLLG+AG +DEA+ FIRTMP +P+A IW ALL SC +H +
Sbjct: 446  DSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKN 505

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            +E  E A +++  L P +S +Y L+ N+ A   +W++   +R  M + G++     S I+
Sbjct: 506  VEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIE 565

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +D +V  F AE + HP   EIY ++  ++  +K  GY+P+T  V  ++DE EK   +  H
Sbjct: 566  LDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHH 625

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLAI +GLMK    A IR+ KN RVC+DCH+A K +S V  REI +RD  RFHHF++G
Sbjct: 626  SEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDG 685

Query: 1068 ECSCNDCW 1075
             CSCND W
Sbjct: 686  TCSCNDYW 693



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 223/515 (43%), Gaps = 43/515 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF--LEDYESF 271
           HA +IK G++  S     SL+            A + F    R       +  L      
Sbjct: 36  HAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRALLH 95

Query: 272 GGEVQELLEVWGE-LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
            G  ++ L ++ E L    V      +   LK C+++    +G  + A  +KRG   D  
Sbjct: 96  AGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRF 155

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  +L++ Y  CRDV +A  LF  V +    ++WN II   ++N  W   +++F+ M   
Sbjct: 156 VLSSLIHMYASCRDVAAAQLLFDAVEE-NGVVMWNAIITAYMKNGNWMEVVEMFKGMLEV 214

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                  T+V ++ AC ++G    GK +  YV +  L  N ++   LI MY++  +L  A
Sbjct: 215 GVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKA 274

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            R+FD M+  ++ +W++MIS YT       A +LF++M  + ++P+ +T           
Sbjct: 275 RRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVT----------- 323

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                                   +  VL A   L  L+ G+  H YI R  L   + +G
Sbjct: 324 ------------------------MVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILG 359

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T+L+D Y K  C+ +A E F++M  +N   W +LI G    G    A ++ + M +  I+
Sbjct: 360 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIE 419

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLK 689
           P  V++  ++   S     +E       M ++ GI P    +  ++    +     E+ +
Sbjct: 420 PTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQ 479

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
           F   M    I+PN+    +LL +C     ++ G+E
Sbjct: 480 FIRTMP---IEPNAVIWRALLSSCAVHKNVEIGEE 511



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 202/463 (43%), Gaps = 72/463 (15%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
           +N ++   L     E+A+ LF EM   +S      T+   L++C+++     G+ I  Y 
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
           +K  L ++  V + LI MY+    +  A  +FD+++++ +  WN++I++Y          
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAY---------- 195

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
                                      +G++  V+ + +GM  +G   +  ++  V+ A 
Sbjct: 196 -------------------------MKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTAC 230

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             +   K G+    Y+   GL  +  + T+L+DMY K   L  A+ +FD M++R++VAW+
Sbjct: 231 GRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWS 290

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG-------------QS 649
           ++ISGY        A  + ++M+  E++P+ V+  S++S  ++ G             + 
Sbjct: 291 AMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRK 350

Query: 650 KEALVIIHHMKNSGIYP------------------NVVTWTSLISGSLQNENYRESLKFF 691
           + +L II        Y                   N  TWT+LI G   N   RE+L+ F
Sbjct: 351 RLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELF 410

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSK 750
             M++  I+P   T   +L  C    L++ G+     +    G    A     ++D+  +
Sbjct: 411 SSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGR 470

Query: 751 SGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN---GKEAI 789
           +G +  A +  R    +  A  W  ++   A++ N   G+EA+
Sbjct: 471 AGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 138/306 (45%), Gaps = 5/306 (1%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYF 254
           C L   ++   L   +   A  +K G +  +D  V  SLI  Y    D  +A   F    
Sbjct: 124 CALKSCSRMCTLDVGRGIQAYAVKRGLM--ADRFVLSSLIHMYASCRDVAAAQLLFDAVE 181

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
                 W++ +  Y    G   E++E++  +   GV F    L  ++  C ++    LG 
Sbjct: 182 ENGVVMWNAIITAYMK-NGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGK 240

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            V   + ++G   + +L  AL++ Y KC ++  A +LF  +    D + W+ +I    + 
Sbjct: 241 WVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQS-RDVVAWSAMISGYTQA 299

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           ++   A+ LF EMQ +  +    T+V +L ACA +GA   GK +H Y+ +  L   + + 
Sbjct: 300 DQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILG 359

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+  Y++   ++ A   F+SM   N  +W ++I      G    A  LF+ M  + I+
Sbjct: 360 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIE 419

Query: 495 PDIITW 500
           P  +T+
Sbjct: 420 PTDVTF 425


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Glycine max]
          Length = 686

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/647 (33%), Positives = 347/647 (53%), Gaps = 44/647 (6%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            N +++ Y+ L   + A  + +  N       ++TW  L+SG   +  + + L     M+ 
Sbjct: 47   NHLVNMYSKLDLPNSAQLVLSLTNPR----TVVTWTSLISGCVHNRRFTSALLHFSNMRR 102

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
                PN  +   V +A   L +   G++ H   L+ G   D++VG S  DMY K      
Sbjct: 103  ECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPE 162

Query: 586  AQEVFDNMKNRNIVAWNSLIS-----GYCFKGL--------------------FVNAKKM 620
            A+ +FD M +RN+  WN+ +S     G C   +                    F+NA   
Sbjct: 163  ARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACAD 222

Query: 621  LNQME----------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
            +  +E              + D+  +N L+  Y   G    + ++   + +     NVV+
Sbjct: 223  IVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSG--RRNVVS 280

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W SL++  +QN     +   F+Q ++E ++P    +SS+L  C  LG L+ G+ +H L L
Sbjct: 281  WCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAL 339

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K    ++ +V + L+D+Y K G+++ A +VFR+   + L +WN MI G+A  G+   A+ 
Sbjct: 340  KACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALS 399

Query: 791  LFHELLE--TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            LF E+     G     +T  ++L+AC  +G VE G + F+SM   Y I P  EHY+C+VD
Sbjct: 400  LFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVD 459

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG++G +D A++FI+ MP  P  ++WGALLG+C++HG  +  +IA+ +LF+L+P +S N
Sbjct: 460  LLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGN 519

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            + +  N+LA + RWE+   +R  M ++G+K  + +SW+ +   VHVF A+ + H    EI
Sbjct: 520  HVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEI 579

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
               L  L  EMKK GYVPD      D++EEEK   +  H+EK+A+ +GL+      PIR+
Sbjct: 580  QAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRI 639

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KN R+C DCH+A K++S + GREI +RD  RFH F++G CSC D W
Sbjct: 640  TKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 5/244 (2%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L  C  +++  LG ++H  +++  +  DV +   L++FYGKC D+ S+  +FS +     
Sbjct: 217 LNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRR 276

Query: 361 DLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +++ W  ++   ++N + E A  +F + +    +     I  +L ACA++G    G+ +H
Sbjct: 277 NVVSWCSLLAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVH 335

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              LK+ +E N+ V + L+ +Y +   +E A +VF  M + NL +WN+MI  Y  LG VD
Sbjct: 336 ALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVD 395

Query: 480 VAWSLFNKMNSSR--IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVS 536
           +A SLF +M S    I    +T   +LS     G+ +  L +   M+   G  P     +
Sbjct: 396 MALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYA 455

Query: 537 VVLQ 540
            V+ 
Sbjct: 456 CVVD 459



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 116/549 (21%), Positives = 217/549 (39%), Gaps = 91/549 (16%)

Query: 312 LGVEVHASLIK-RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
           LG  VHA +++         L   L+N Y K  D+ ++ +L   +++    + W  +I  
Sbjct: 25  LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKL-DLPNSAQLVLSLTNPRTVVTWTSLISG 83

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
            + N ++ +A+  F  M+         T   + +A A +     GKQ+H   LK     +
Sbjct: 84  CVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILD 143

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           + V      MYS+      A  +FD M   NL++WN+ +S+    G    A + F K   
Sbjct: 144 VFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLC 203

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
              +P+ IT+                                      L A  ++  L+ 
Sbjct: 204 VDGEPNAITF-----------------------------------CAFLNACADIVSLEL 228

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN--RNIVAWNSLISGY 608
           GR+ HG+I+R+    D+ V   L+D Y K   + +++ VF  + +  RN+V+W SL++  
Sbjct: 229 GRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAAL 288

Query: 609 ---------CFKGLFVNAKKMLNQME---------------------------EEEIKPD 632
                    C   +F+ A+K +   +                           +  ++ +
Sbjct: 289 VQNHEEERACM--VFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEEN 346

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           +   ++LV  Y   G  + A  +   M       N+VTW ++I G     +   +L  F 
Sbjct: 347 IFVGSALVDLYGKCGSIEYAEQVFREMPER----NLVTWNAMIGGYAHLGDVDMALSLFQ 402

Query: 693 QMQQED--IKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYS 749
           +M      I  +  T+ S+L  C   G ++ G +I   +  + G    A     ++D+  
Sbjct: 403 EMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLG 462

Query: 750 KSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA---- 804
           +SG +  A E + R     T++ W  ++    ++G  K   +   +L E    PD     
Sbjct: 463 RSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFE--LDPDDSGNH 520

Query: 805 ITFTALLAA 813
           + F+ +LA+
Sbjct: 521 VVFSNMLAS 529



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 131/576 (22%), Positives = 217/576 (37%), Gaps = 96/576 (16%)

Query: 88  HPQNQQRKCEVTN-------FKAVSVL--SVGSESFFALLL----YYIACVGSSQLTRQN 134
           H  N +R+C + N       FKA + L   V  +   AL L         VG S     +
Sbjct: 96  HFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYS 155

Query: 135 TAIVMPKLHSIYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISS- 193
              + P+  +++     R     N  ++  N++ +          D +A   +  C+   
Sbjct: 156 KTGLRPEARNMFDEMPHRNLATWN--AYMSNAVQDGRC------LDAIAAFKKFLCVDGE 207

Query: 194 ----GFC-FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAK 248
                FC FLN       L   +  H  +++  +      +   LI  Y + GD  S+  
Sbjct: 208 PNAITFCAFLNACADIVSLELGRQLHGFIVR-SRYREDVSVFNGLIDFYGKCGDIVSSEL 266

Query: 249 AFFLYFS--RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSR--------ILT 298
            F    S  R+   W S L            L++   E     V  ++R        +++
Sbjct: 267 VFSRIGSGRRNVVSWCSLL----------AALVQNHEEERACMVFLQARKEVEPTDFMIS 316

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
            +L  C +L    LG  VHA  +K   + ++ +  AL++ YGKC  +E A ++F E+ + 
Sbjct: 317 SVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPE- 375

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK-AISR-TIVKMLQACAKVGAFHEGK 416
            + + WN +I         + A+ LF+EM   S   A+S  T+V +L AC++ GA   G 
Sbjct: 376 RNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGL 435

Query: 417 QIHGYVL-KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           QI   +  +  +E       C++ +  R+                               
Sbjct: 436 QIFESMRGRYGIEPGAEHYACVVDLLGRS------------------------------- 464

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G VD A+    +M    I P I  W  LL     HG  +  L  +   +     P+ S  
Sbjct: 465 GLVDRAYEFIKRMP---ILPTISVWGALLGACKMHGKTK--LGKIAAEKLFELDPDDSGN 519

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGL-DYDLYVGTSLMDMYVKNDC-LQNAQEVFDNM 593
            VV   +    L   GR     I+R  + D  +        + VKN   +  A++ F   
Sbjct: 520 HVVFSNM----LASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHE- 574

Query: 594 KNRNIVAWNSLISGYCFKGLFV-NAKKMLNQMEEEE 628
           KN  I A  + + G   K  +V +A   L  +EEEE
Sbjct: 575 KNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEE 610


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 852

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/732 (31%), Positives = 359/732 (49%), Gaps = 97/732 (13%)

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            R  +   A  LF+ M+    K    T+  +L+ C+ +G   +G+ IHGYV+K+  ESN+ 
Sbjct: 189  RFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVY 248

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            V   L+ MY++   +  A  +F  +                           FNK N   
Sbjct: 249  VVAGLVDMYAKCRHISEAEILFKGLA--------------------------FNKGNH-- 280

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                 + W  +++G+  +G     +   R M + G   N  +   +L A + +    +G 
Sbjct: 281  -----VLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGE 335

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + HG I+RNG   + YV ++L+DMY K   L +A+ V +NM++ ++V+WNS+I G    G
Sbjct: 336  QVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHG 395

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY---SIWGQSKEALVIIHHMKNSGIYPN-- 667
                A  +  +M    +K D  ++ S+++      I G+S   LVI    +N  +  N  
Sbjct: 396  FEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKSVHCLVIKTGFENYKLVSNAL 455

Query: 668  ------------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                                    V++WTSL++G  QN ++ ESLK F  M+   + P+ 
Sbjct: 456  VDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQ 515

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
              ++S+L  C  L LL+ GK++H   +K G      V   L+ MY+K G L  A  +F  
Sbjct: 516  FIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVS 575

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               +                                   D IT+TAL+     +G   + 
Sbjct: 576  MHVR-----------------------------------DVITWTALIVGYARNGKGRDS 600

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             KYF  M   Y I P  EHY+CM+DL G+ G LDEA + +  M  KPDAT+W ALL +CR
Sbjct: 601  LKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACR 660

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG+LE  E A+  LF+LEP N+  Y ++ N+   + +W+D  ++R  M   G+      
Sbjct: 661  VHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGC 720

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            SWI+++  +H F +E   HP   EIY ++  ++  +K++GYVPD      D+D E K   
Sbjct: 721  SWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEAG 780

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLA+ +GL+ +   APIR+ KN RVC DCH+A KY+S V  R I LRD   FHH
Sbjct: 781  LAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCFHH 840

Query: 1064 FREGECSCNDCW 1075
            F+EGECSC D W
Sbjct: 841  FKEGECSCEDYW 852



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 228/513 (44%), Gaps = 72/513 (14%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y   G    A + F  + SRS   WSS +  Y  FG +  E  +++  +  +G  
Sbjct: 151 TMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQA-EAFDLFKRMRLEGQK 209

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  IL+ C+ L     G  +H  ++K GF+ +V++   L++ Y KCR +  A  L
Sbjct: 210 PSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEIL 269

Query: 352 FSEVS-DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           F  ++ +  + +LW  ++    +N     AI+ FR M     ++   T   +L AC+ V 
Sbjct: 270 FKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVS 329

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A   G+Q+HG ++++    N  V + L+ MY++   L  A RV ++M+D ++ SWNSMI 
Sbjct: 330 AHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIV 389

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITW----NCLLSGHFTHGSYQNVLTLLRGMQS- 525
                G+ + A  LF KM++  ++ D  T+    NC + G    G   + L +  G ++ 
Sbjct: 390 GCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRID-GKSVHCLVIKTGFENY 448

Query: 526 ---------------------------------------LGFRPNGSS------------ 534
                                                   G+  NGS             
Sbjct: 449 KLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRI 508

Query: 535 ---------VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
                    V+ +L A  EL LL++G++ H   ++ GL   L V  SL+ MY K  CL +
Sbjct: 509 SGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDD 568

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYS 644
           A  +F +M  R+++ W +LI GY   G   ++ K   QM++   I+P    +  ++  + 
Sbjct: 569 ADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFG 628

Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
             G+  EA  I++ M    + P+   W +L++ 
Sbjct: 629 RLGKLDEAKEILNQMD---VKPDATVWKALLAA 658



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 167/382 (43%), Gaps = 78/382 (20%)

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN---- 622
           ++    L++   K+  + +A+E+FD M  R+   WN+++SGY   G  V A+++ N    
Sbjct: 115 IFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSS 174

Query: 623 ---------------------------QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
                                      +M  E  KP   +  S++ G S  G  ++  +I
Sbjct: 175 RSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMI 234

Query: 656 IHHMKNSGIYPNV---------------------------------VTWTSLISGSLQNE 682
             ++  +G   NV                                 V WT++++G  QN 
Sbjct: 235 HGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNG 294

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
           +  ++++FF  M  E ++ N  T  S+L  C  +     G+++H   ++NGF  +AYV +
Sbjct: 295 DDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQS 354

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+DMY+K G+L SA+ V     +  + SWN MI+G   +G  +EAILLF ++     + 
Sbjct: 355 ALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKI 414

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT-IEHY----SCMVDLLGKAGYLD 857
           D  TF ++L  C    +        D  S    +I T  E+Y    + +VD+  K   L+
Sbjct: 415 DHYTFPSVLNCCIVGRI--------DGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLN 466

Query: 858 EAWDFIRTMPFKPDATIWGALL 879
            A+     M F+ D   W +L+
Sbjct: 467 CAYAVFEKM-FEKDVISWTSLV 487



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 47/217 (21%)

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA----TGLIDMYSKSGNLKSAR 758
           ST +S LL     L    +   +  + + N  I D+Y +      L++  SKSG +  AR
Sbjct: 78  STALSVLLSASPSLNEDSDDTGVQQVVMHN--IADSYQSIFHSNQLLNGLSKSGQIDDAR 135

Query: 759 EVFRKSANKTLASWNCMIMGFA-------------------------------IYGNGKE 787
           E+F K   +   +WN M+ G+A                                +G   E
Sbjct: 136 ELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAE 195

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH----Y 843
           A  LF  +   G +P   T  ++L  C   GL+++G      M   Y +    E      
Sbjct: 196 AFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKG-----EMIHGYVVKNGFESNVYVV 250

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPF-KPDATIWGALL 879
           + +VD+  K  ++ EA    + + F K +  +W A++
Sbjct: 251 AGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMV 287


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/571 (37%), Positives = 321/571 (56%), Gaps = 53/571 (9%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            +  +  RP+  S+  VL A   +    +G+  HG  +R+G   DL+VG +L+DMY K   
Sbjct: 4    LGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAK--- 60

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
                                      C  G+   A K+ ++++E+    D+VSWN++V+G
Sbjct: 61   --------------------------C--GMVDEASKVFDRIKEK----DVVSWNAMVNG 88

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED---- 698
            YS  G+ ++AL +   M+   I  NVV+W+++I+   Q     E+L  F +MQ  +    
Sbjct: 89   YSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDA 148

Query: 699  -------------IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD-AYVATGL 744
                         +KPN  T+S  L  C  L  L+ G++IH   L+N F     YVA  L
Sbjct: 149  LELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCL 208

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            IDMY+KSG++  AR VF     K   SW  ++ G+ ++G GKEA+ +F E+   G QPD 
Sbjct: 209  IDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDG 268

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +T   +L AC +SG++++G ++F+SMS ++ +IP  EHY+CMVDLLG+AG L+EA + I 
Sbjct: 269  VTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIE 328

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             M  +P + +W ALL  CRIH ++E  E A+++L +L   N  +Y L+ N+ A + RW+D
Sbjct: 329  GMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARRWKD 388

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V R+R  M   G++     SW+Q  +    F      HP + +IY  L  L   +K LGY
Sbjct: 389  VARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIYEILRSLTQRIKVLGY 448

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            VP+T     D+D+EEK  +L  H+EKLA+ YG++ +   APIR+ KN RVC DCH A  Y
Sbjct: 449  VPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIRITKNLRVCGDCHNAITY 508

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S++   EI LRD +RFHHF++G CSC+  W
Sbjct: 509  ISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 172/335 (51%), Gaps = 22/335 (6%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           ++V +L ACA +GA+  GK +HG  ++S    +L V N L+ MY++   ++ A++VFD +
Sbjct: 15  SLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRI 74

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG----------- 506
           K+ ++ SWN+M++ Y+ +G  + A  LF KM    I+ ++++W+ +++            
Sbjct: 75  KEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETL 134

Query: 507 ----HFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                  HG   + L L   M  Q    +PN  ++S  L A   L  L+ GR+ H YILR
Sbjct: 135 DVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILR 194

Query: 561 NGLDYD-LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           N  D   LYV   L+DMY K+  +  A+ VFDN+K +N V+W SL++GY   G    A +
Sbjct: 195 NHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALE 254

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGS 678
           + ++M    ++PD V+   ++   S  G   + +   + M K  G+ P    +  ++   
Sbjct: 255 VFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLL 314

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +     E+++    MQ E   P+S    +LL  C
Sbjct: 315 GRAGRLNEAMELIEGMQME---PSSIVWVALLSGC 346



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 59/273 (21%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +L  C  + A+  G  VH   ++ G   D+ +  AL++ Y KC  V+ A+K+F  + 
Sbjct: 16  LVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIK 75

Query: 357 DLEDDLLWNEII---------------MVKLRNEKWE--------------------NAI 381
           + +D + WN ++                 K+R E  E                      +
Sbjct: 76  E-KDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETL 134

Query: 382 KLFREMQFSSA-----------------KAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            +FREMQ   A                 K    TI   L ACA++ A   G+QIH Y+L+
Sbjct: 135 DVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILR 194

Query: 425 SALESN-LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           +  +S  L V NCLI MY+++  +++A  VFD++K  N  SW S+++ Y   G    A  
Sbjct: 195 NHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALE 254

Query: 484 LFNKMNSSRIQPD-----IITWNCLLSGHFTHG 511
           +F++M    +QPD     ++ + C  SG    G
Sbjct: 255 VFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQG 287


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/728 (32%), Positives = 370/728 (50%), Gaps = 74/728 (10%)

Query: 418  IHGYVLKSALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H  VL++      + V N L++ Y+R+ +L LA R+FD+M D NL + N+++S+     
Sbjct: 31   VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSG----HFTHGSYQNVLTLLRG---MQSLGFR 529
             +     LF  M     Q D +++N L++G         +      LLR    +     R
Sbjct: 91   LLPDMDRLFASMP----QRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVR 146

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
            P+  ++S ++ A + L     GR+ H  I+R G     +  + L+DMY K   + +A+ V
Sbjct: 147  PSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRV 206

Query: 590  FDNMKNRNIV-------------------------------AWNSLISGYCFKGLFVNAK 618
            FD M  +N+V                                W ++++G    GL   A 
Sbjct: 207  FDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEAL 266

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI----IHHMKNSGIY--------- 665
             +  +M  E +  D  ++ S+++       S+E   I    I  + +  I+         
Sbjct: 267  DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMY 326

Query: 666  ------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                               N+++WT++I G  QN    E+++ F +MQ + IKPN  T+ 
Sbjct: 327  SKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLG 386

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            S++ +C  L  L+ G + HC+ L +G      V++ L+ +Y K G+++ A  +F +    
Sbjct: 387  SVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH 446

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
               S+  ++ G+A +G  KE I LF ++L  G +P+ +TF  +L+AC  SGLVE+G  YF
Sbjct: 447  DQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYF 506

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
             SM  D+ I+   +HY+CM+DL  ++G L EA +FIR MP  PDA  W  LL +CR+ G 
Sbjct: 507  HSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGD 566

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            +E  + A+  L K +P N A+Y L+ ++ A    W +V  LR  M +  VK     SWI+
Sbjct: 567  MEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIK 626

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
                VH+FSA+   HP +G IY +L  L S+M + GY PD   V  D+ + EK  +L +H
Sbjct: 627  YKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNH 686

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLAI +GL+      PIRV+KN RVC DCH A K++S + GR+I +RD  RFH F  G
Sbjct: 687  SEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNG 746

Query: 1068 ECSCNDCW 1075
             CSC D W
Sbjct: 747  ICSCGDFW 754



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 213/471 (45%), Gaps = 75/471 (15%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+  M+ A + +G    G+Q+H  +++    +     + L+ MY++   +  A RVFD M
Sbjct: 151 TMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEM 210

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              N+  +N+MI+       V+ A  +F  M    +  D ITW  +++G   +G     L
Sbjct: 211 VVKNVVMYNTMITGLLRCKMVEEARGVFEAM----VDRDSITWTTMVTGLTQNGLQSEAL 266

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
            + R M++ G   +  +   +L A   L   + G++ H Y +R   D +++VG++L+DMY
Sbjct: 267 DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMY 326

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            K   ++ A+ VF  M  +NI++W ++I GY   G    A ++ ++M+ + IKP+  +  
Sbjct: 327 SKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLG 386

Query: 638 S---------------------LVSGYSIWGQSKEALVII----------HHMKNSGIYP 666
           S                     LVSG   +     ALV +          H + +   + 
Sbjct: 387 SVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH 446

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEI 725
           + V++T+L+SG  Q    +E++  F +M  + +KPN  T   +L  C   GL++ G    
Sbjct: 447 DQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYF 506

Query: 726 HCLCLKNGFI--KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           H +   +G +   D Y  T +ID+YS+SG LK A E  R+          C         
Sbjct: 507 HSMQQDHGIVLLDDHY--TCMIDLYSRSGRLKEAEEFIRQMP-------RC--------- 548

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-WKYFDSMSTD 833
                             PDAI +  LL+AC+  G +E G W   + + TD
Sbjct: 549 ------------------PDAIGWATLLSACRLRGDMEIGKWAAENLLKTD 581



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 178/406 (43%), Gaps = 48/406 (11%)

Query: 219 KMGKIWNS----DDMV-------KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
           KMG I ++    D+MV        ++I   L       A   F     R    W++ +  
Sbjct: 196 KMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTG 255

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
               G +  E L+V+  +  +GV         IL  C  L A   G ++HA  I+  +D 
Sbjct: 256 LTQNGLQ-SEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDG 314

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           ++ +  AL++ Y KCR +  A  +F  ++  ++ + W  +I+   +N   E A+++F EM
Sbjct: 315 NIFVGSALVDMYSKCRSIRLAEAVFRRMT-CKNIISWTAMIVGYGQNGCGEEAVRVFSEM 373

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
           Q    K    T+  ++ +CA + +  EG Q H   L S L   ++V + L+++Y +   +
Sbjct: 374 QTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSI 433

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
           E A R+FD M  H+  S+ +++S Y   G       LF KM    ++P+ +T+  +LS  
Sbjct: 434 EDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSAC 493

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              G  +   +    MQ                            + HG +L   LD D 
Sbjct: 494 SRSGLVEKGCSYFHSMQ----------------------------QDHGIVL---LD-DH 521

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKG 612
           Y  T ++D+Y ++  L+ A+E    M +  + + W +L+S    +G
Sbjct: 522 Y--TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 716

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/697 (31%), Positives = 373/697 (53%), Gaps = 50/697 (7%)

Query: 414  EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            EG +++ +V  + L+  +SV  C    YS      L   ++    + N     ++I +Y 
Sbjct: 35   EGHELNPFVFTTILKLLVSV-ECAELAYS------LHACIYKLGHESNAFVGTALIDAYA 87

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
              G V+ A   F+ +       D+++W  +++ +  +  +Q+ L L   M+ +GF PN  
Sbjct: 88   VCGSVNSARQAFDAIACK----DMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHF 143

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            + + VL+A   L     G+  HG +L+   + DLYVG  L+D+Y K     +   VF+ M
Sbjct: 144  TFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEM 203

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------------- 636
               +++ W+ +IS Y        A ++  QM    + P+  ++                 
Sbjct: 204  PKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGK 263

Query: 637  ------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                              N+L+  Y+  G+   ++ +   + N     N VTW ++I G 
Sbjct: 264  QVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNR----NEVTWNTMIVGY 319

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            +Q+ +  ++L  +  M +  ++ +  T SS+L+ C  L  ++ G +IH L LK  + KD 
Sbjct: 320  VQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDV 379

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
             V   LIDMY+K G++K+AR VF   + +   SWN MI G++++G   EA+  F  + ET
Sbjct: 380  VVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQET 439

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
               P+ +TF ++L+AC N+GL++ G  YF SM  DY I P +EHY+CMV LLG++G+LD+
Sbjct: 440  ECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDK 499

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A   I  +P +P+  +W ALLG+C IH  ++   ++++++ +++P + A + L+ N+ A 
Sbjct: 500  AVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYAR 559

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
            + RW  V  +R  M   GVK     SWI+   IVH FS     HP    I   L  L  +
Sbjct: 560  TRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMK 619

Query: 979  MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
             +K GYVPD   V +D++++EK + L  H+E+LA+ +GL++T SR  IR++KN R+C+DC
Sbjct: 620  TEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDC 679

Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            H+A K +S +  R+I +RD  RFHHF++G CSC D W
Sbjct: 680  HSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 140/587 (23%), Positives = 261/587 (44%), Gaps = 80/587 (13%)

Query: 256 RSYADWSSFLEDY-ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
           R+   + + ++ Y +SF  ++ E+++++  +H +G      + T ILKL   +    L  
Sbjct: 4   RNTVSFVTLIQGYVQSF--QLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAY 61

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            +HA + K G + +  +  AL++ Y  C  V SA + F  ++  +D + W  ++     N
Sbjct: 62  SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIA-CKDMVSWTGMVACYAEN 120

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           ++++++++LF EM+         T   +L+AC  + AF  GK +HG VLK+  E +L V 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+ +Y++        RVF+ M  H++  W+ MIS Y        A  LF +M  + + 
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           P+           FT  S                         VLQ+   +  L+ G++ 
Sbjct: 241 PN----------QFTFAS-------------------------VLQSCASIENLQLGKQV 265

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H ++L+ GLD +++V  +LMD+Y K   L N+ ++F  + NRN V WN++I GY   G  
Sbjct: 266 HCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDG 325

Query: 615 VNAKKMLNQMEEEEIKP-----------------------------------DLVSWNSL 639
             A  +   M E +++                                    D+V  N+L
Sbjct: 326 DKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNAL 385

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           +  Y+  G  K A ++   +       + ++W ++ISG   +    E+LK F  MQ+ + 
Sbjct: 386 IDMYAKCGSIKNARLVFDMLSER----DEISWNAMISGYSMHGLVGEALKAFQMMQETEC 441

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA-TGLIDMYSKSGNLKSAR 758
            PN  T  S+L  C   GLL  G+      +++  I+      T ++ +  +SG+L  A 
Sbjct: 442 VPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAV 501

Query: 759 EVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           ++  +      +  W  ++    I+ +    I+   ++L+   Q +A
Sbjct: 502 KLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEA 548



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 2/270 (0%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y +FGD     + F          WS  +  Y     + +E +E++G++    V+     
Sbjct: 187 YTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQ-SNQSREAVELFGQMRRAFVLPNQFT 245

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              +L+ C  +    LG +VH  ++K G D +V +  ALM+ Y KC  ++++ KLF E+ 
Sbjct: 246 FASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP 305

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  +++ WN +I+  +++   + A+ L++ M     +A   T   +L+ACA + A   G 
Sbjct: 306 N-RNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGT 364

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           QIH   LK+  + ++ V N LI MY++   ++ A  VFD + + +  SWN+MIS Y+  G
Sbjct: 365 QIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHG 424

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            V  A   F  M  +   P+ +T+  +LS 
Sbjct: 425 LVGEALKAFQMMQETECVPNKLTFVSILSA 454



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 76/148 (51%)

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           N V++ +LI G +Q+    E +  F ++ +E  + N    +++L+    +   +    +H
Sbjct: 5   NTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLH 64

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               K G   +A+V T LID Y+  G++ SAR+ F   A K + SW  M+  +A     +
Sbjct: 65  ACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQ 124

Query: 787 EAILLFHELLETGFQPDAITFTALLAAC 814
           +++ LF E+   GF P+  TF  +L AC
Sbjct: 125 DSLQLFAEMRMVGFNPNHFTFAGVLKAC 152


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 278/899 (30%), Positives = 435/899 (48%), Gaps = 102/899 (11%)

Query: 222  KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEV 281
            ++ N D +   +I  Y   G    +   F    S++   W++ +  Y S      E+LE 
Sbjct: 470  RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY-SRNELYDEVLET 528

Query: 282  WGELHGKGVIFRSRIL-TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
            + E+     +         ++K C  +    +G+ VH  ++K G   DV +  AL++FYG
Sbjct: 529  FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 588

Query: 341  KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI----S 396
                V  A +LF ++    + + WN +I V   N   E +  L  EM   +         
Sbjct: 589  THGFVTDALQLF-DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 647

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
             T+V +L  CA+      GK +HG+ +K  L+  L + N L+ MYS+   +  A  +F  
Sbjct: 648  ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 707

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
              + N+ SWN+M+  ++  G                                THG++   
Sbjct: 708  NNNKNVVSWNTMVGGFSAEGD-------------------------------THGTFD-- 734

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVT---ELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              +LR M + G       V+ +L AV        L   +E H Y L+    Y+  V  + 
Sbjct: 735  --VLRQMLAGGEDVKADEVT-ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 791

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC----------------FKGLFVNA 617
            +  Y K   L  AQ VF  ++++ + +WN+LI G+                   GL  ++
Sbjct: 792  VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 851

Query: 618  -------------------KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
                               K++   +    ++ DL  + S++S Y   G+      +   
Sbjct: 852  FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 911

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            M++     ++V+W ++I+G LQN     +L  F QM    I+    +M  +   C  L  
Sbjct: 912  MEDK----SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 967

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            L+ G+E H   LK+    DA++A  LIDMY+K+G++  + +VF     K+ ASWN MIMG
Sbjct: 968  LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 1027

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            + I+G  KEAI LF E+  TG  PD +TF  +L AC +SGL+ EG +Y D M + + + P
Sbjct: 1028 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 1087

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFI-RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
             ++HY+C++D+LG+AG LD+A   +   M  + D  IW +LL SCRIH +LE  E  + +
Sbjct: 1088 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 1147

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            LF+LEP    NY L+ NL A   +WEDV ++R  M+E+ ++     SWI++++ V  F  
Sbjct: 1148 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF-- 1205

Query: 958  EGAPHPATGEIYFELYHLVS------EMK--KLGYVPDTRCVYQDIDEEEKGKVLLSHTE 1009
                    GE + + +  +       EMK  K+GY PDT  V  D+ EEEK + L  H+E
Sbjct: 1206 ------VVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 1259

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            KLA+ YGL+KT     IRV KN R+C DCH AAK +S V  REI +RD  RFHHF+ GE
Sbjct: 1260 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGE 1318



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 147/599 (24%), Positives = 251/599 (41%), Gaps = 125/599 (20%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +LQA  K      G++IH  V  S  L ++  +C  +I+MY+     + +  VFD+++  
Sbjct: 445  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQPDIITWNC----------------- 502
            NL  WN++ISSY+     D     F +M +++ + PD  T+ C                 
Sbjct: 505  NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564

Query: 503  ------------------LLSGHFTHGSYQNVLTL---------------LRGMQSLGFR 529
                              L+S + THG   + L L               +R     GF 
Sbjct: 565  HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624

Query: 530  P--------------NGSSVSVVLQAVTEL------RLLKYGRESHGYILRNGLDYDLYV 569
                           +G+ +  V   VT L      R +  G+  HG+ ++  LD +L +
Sbjct: 625  EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684

Query: 570  GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEE 627
              +LMDMY K  C+ NAQ +F    N+N+V+WN+++ G+  +G       +L QM    E
Sbjct: 685  NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744

Query: 628  EIKPDLVS-----------------------------------WNSLVSGYSIWGQSKEA 652
            ++K D V+                                    N+ V+ Y+  G    A
Sbjct: 745  DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 804

Query: 653  LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
              + H +++      V +W +LI G  Q+ + R SL   +QM+   + P+S T+ SLL  
Sbjct: 805  QRVFHGIRSK----TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 860

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
            C  L  L+ GKE+H   ++N   +D +V   ++ +Y   G L + + +F    +K+L SW
Sbjct: 861  CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 920

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC---KNSGLVEEGWKY-FD 828
            N +I G+   G    A+ +F +++  G Q   I+   +  AC    +  L  E   Y   
Sbjct: 921  NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 980

Query: 829  SMSTDYNIIPTIEHYSC-MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
             +  D   I      +C ++D+  K G + ++      +  K  A+ W A++    IHG
Sbjct: 981  HLLEDDAFI------ACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 1032



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 145/617 (23%), Positives = 258/617 (41%), Gaps = 90/617 (14%)

Query: 214  HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            H  ++K G +   D  V  +L+  Y   G  T A + F +   R+   W+S +  + S  
Sbjct: 565  HGLVVKTGLV--EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF-SDN 621

Query: 273  GEVQELLEVWGEL---HGKGVIFRS-RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
            G  +E   + GE+   +G G        L  +L +C +     LG  VH   +K   D +
Sbjct: 622  GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 681

Query: 329  VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
            + L  ALM+ Y KC  + +A  +F ++++ ++ + WN ++              + R+M 
Sbjct: 682  LVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 740

Query: 389  FS--SAKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMY 441
                  KA   TI+  +  C     FHE      K++H Y LK     N  V N  ++ Y
Sbjct: 741  AGGEDVKADEVTILNAVPVC-----FHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 795

Query: 442  SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            ++   L  A RVF  ++   ++SWN++I  +              + N  R+        
Sbjct: 796  AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA-------------QSNDPRLS------- 835

Query: 502  CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
              L  H               M+  G  P+  +V  +L A ++L+ L+ G+E HG+I+RN
Sbjct: 836  --LDAHLQ-------------MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 880

Query: 562  GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
             L+ DL+V  S++ +Y+    L   Q +FD M+++++V+WN++I+GY   G    A  + 
Sbjct: 881  WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 940

Query: 622  NQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIH---------------HMKN 661
             QM    I+   +S   +    S+      G+   A  + H               + KN
Sbjct: 941  RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 1000

Query: 662  SGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
              I             +  +W ++I G   +   +E++K F +MQ+    P+  T   +L
Sbjct: 1001 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 1060

Query: 711  QTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK--SANK 767
              C   GL+  G + +  +    G   +      +IDM  ++G L  A  V  +  S   
Sbjct: 1061 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 1120

Query: 768  TLASWNCMIMGFAIYGN 784
             +  W  ++    I+ N
Sbjct: 1121 DVGIWKSLLSSCRIHQN 1137



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 161/331 (48%), Gaps = 14/331 (4%)

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
            L S+K  H   +K   ++N + +  + +  Y + G  + A + F    S++   W++ + 
Sbjct: 766  LPSLKELHCYSLKQEFVYN-ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI- 823

Query: 267  DYESFGGEVQE-----LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
                 GG  Q       L+   ++   G++  S  +  +L  C+KL +  LG EVH  +I
Sbjct: 824  -----GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 878

Query: 322  KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
            +   + D+ +  ++++ Y  C ++ +   LF  + D +  + WN +I   L+N   + A+
Sbjct: 879  RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVITGYLQNGFPDRAL 937

Query: 382  KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
             +FR+M     +    +++ +  AC+ + +   G++ H Y LK  LE +  +   LI MY
Sbjct: 938  GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 997

Query: 442  SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            ++N  +  +++VF+ +K+ + +SWN+MI  Y   G    A  LF +M  +   PD +T+ 
Sbjct: 998  AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 1057

Query: 502  CLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPN 531
             +L+     G     L  L  M+ S G +PN
Sbjct: 1058 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 1088


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/621 (34%), Positives = 334/621 (53%), Gaps = 55/621 (8%)

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPN-GSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
            GHF       V   LR   S   R +  +S+   L++   L L   G   H   +R+G  
Sbjct: 27   GHFCDA----VSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAF 82

Query: 565  YDLYVGTSLMDMYVKNDC-------------------LQNAQEVFDNMKNRNIVAWNSLI 605
             D +   +L+++Y K  C                    ++ ++VFD M  R++V+WN+L+
Sbjct: 83   ADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLV 142

Query: 606  SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
             G   +G    A   + +M  E  +PD  + ++++  ++     K  L +      +G  
Sbjct: 143  LGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFD 202

Query: 666  PNV-------------------------------VTWTSLISGSLQNENYRESLKFFIQM 694
             +V                               + W SL++G  QN +  E+L  F +M
Sbjct: 203  SDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRM 262

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
             Q  ++P   T SSL+  CG L  L+ GK++H   +  GF  + ++++ LIDMY K G +
Sbjct: 263  LQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEI 322

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
              A  +F K ++  + SW  MIMG+A++G  +EA++LF  +     +P+ ITF A+L AC
Sbjct: 323  SIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTAC 382

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
             ++GLV++GWKYF SMS  Y I+PT+EH++ + D LG+AG LDEA++FI  M  KP A++
Sbjct: 383  SHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASV 442

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            W  LL +CR+H +   AE  ++++ +LEP +  ++ ++ N+ + S RW +   LR SM +
Sbjct: 443  WSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRK 502

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
             G+K     SWI++   +HVF A    HP    I   L     +M + G+VP+T  V+QD
Sbjct: 503  KGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQD 562

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
            I+EE K  VL  H+EKLAIV+G++ T +   IRV+KN RVC DCHT  K++S +  REI 
Sbjct: 563  IEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIV 622

Query: 1055 LRDGARFHHFREGECSCNDCW 1075
            +RD  RFHHF++G CSC D W
Sbjct: 623  VRDANRFHHFKDGNCSCGDFW 643



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 212/482 (43%), Gaps = 63/482 (13%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSA--KAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           W + I        + +A+ LF  M+ S+A   ++  ++   L++CA +G    G  +H  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV- 480
            ++S   ++    N L+++Y +     +     DS                TG+  VDV 
Sbjct: 76  AIRSGAFADRFTANALLNLYCK-----VPCSYLDS----------------TGVAIVDVP 114

Query: 481 ----AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
               A+    K+    I+ D+++WN L+ G    G +   L  +R M   GFRP+  ++S
Sbjct: 115 GSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLS 174

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL    E   +K G E HG+  RNG D D++VG+SL+DMY        + +VFDN+  R
Sbjct: 175 TVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 234

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS--------------- 641
           + + WNSL++G    G    A  +  +M +  ++P  V+++SL+                
Sbjct: 235 DHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLH 294

Query: 642 GYSIWGQSKE----------------ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
            Y I G  ++                 + I H + +    P+VV+WT++I G   +   R
Sbjct: 295 AYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAR 354

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGL 744
           E+L  F +M+  + KPN  T  ++L  C   GL+  G K    +    G +        L
Sbjct: 355 EALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAAL 414

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            D   ++G L  A     K   K  AS W+ ++    ++ N   A  +  +++E   +P 
Sbjct: 415 ADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME--LEPR 472

Query: 804 AI 805
           +I
Sbjct: 473 SI 474



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 191/438 (43%), Gaps = 61/438 (13%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR------------D 344
           L   LK C  L    LG  +HA  I+ G   D     AL+N Y K              D
Sbjct: 53  LPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVD 112

Query: 345 VESANKLFSEVSDLEDDLL------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           V  ++  F  V  + D+++      WN +++      +   A+   R+M     +  S T
Sbjct: 113 VPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFT 172

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM- 457
           +  +L   A+      G ++HG+  ++  +S++ V + LI MY+   + + + +VFD++ 
Sbjct: 173 LSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLP 232

Query: 458 -KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            +DH                                     I WN LL+G   +GS +  
Sbjct: 233 VRDH-------------------------------------ILWNSLLAGCAQNGSVEEA 255

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           L + R M   G RP   + S ++     L  L++G++ H Y++  G + ++++ +SL+DM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
           Y K   +  A  +FD M + ++V+W ++I GY   G    A  +  +ME    KP+ +++
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            ++++  S  G   +       M N  GI P +  + +L     +     E+  F  +MQ
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435

Query: 696 QEDIKPNSTTMSSLLQTC 713
              IKP ++  S+LL+ C
Sbjct: 436 ---IKPTASVWSTLLRAC 450



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 35/257 (13%)

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL---LQTCGGLGLLQNGKEIHC 727
           W   I  +    ++ +++  F++M+     P S+  +SL   L++C  LGL   G  +H 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRAS-AAPRSSVPASLPAALKSCAALGLSALGASLHA 74

Query: 728 LCLKNGFIKDAYVATGLIDMYSK-------------------SGNLKSAREVFRKSANKT 768
           L +++G   D + A  L+++Y K                   S   +S R+VF +   + 
Sbjct: 75  LAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERD 134

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL---AACKN--SGLVEEG 823
           + SWN +++G A  G   EA+    ++   GF+PD+ T + +L   A C +   GL   G
Sbjct: 135 VVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHG 194

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
           + + +   +D  +       S ++D+       D +      +P + D  +W +LL  C 
Sbjct: 195 FAFRNGFDSDVFV------GSSLIDMYANCTRTDYSVKVFDNLPVR-DHILWNSLLAGCA 247

Query: 884 IHGHLEYAEIASRRLFK 900
            +G +E A    RR+ +
Sbjct: 248 QNGSVEEALGIFRRMLQ 264


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 252/808 (31%), Positives = 410/808 (50%), Gaps = 74/808 (9%)

Query: 244  TSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKL 303
             S  K F     R+   W++ +  Y S  GE    L ++  +  +GV         +LK 
Sbjct: 96   VSQEKVFDEMPDRTAFAWNTMIGAYVS-NGEPASALALYWNMRVEGVPLGLSSFPALLKA 154

Query: 304  CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
            C KL     G E+H+ L+K G+     +  AL++ Y K  D+ +A +LF    +  D +L
Sbjct: 155  CAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 214

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN I+     + K    ++LFREM  +     S TIV  L AC        GK+IH  VL
Sbjct: 215  WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 274

Query: 424  KSALESN-LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
            KS+  S+ L VCN LI+MY+R                                G +  A 
Sbjct: 275  KSSTHSSELYVCNALIAMYTR-------------------------------CGKMPQAE 303

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
             +  +MN++    D++TWN L+ G+  +  Y+  L     M + G + +  S++ ++ A 
Sbjct: 304  RILRQMNNA----DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS 359

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
              L  L  G E H Y++++G D +L VG +L+DMY K +        F  M ++++++W 
Sbjct: 360  GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWT 419

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI--IH-HM 659
            ++I+GY      V A ++   + ++ ++ D +   S++   S+    K  L++  IH H+
Sbjct: 420  TVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL---KSMLIVKEIHCHI 476

Query: 660  KNSGIY------------------------------PNVVTWTSLISGSLQNENYRESLK 689
               G+                                +VV+WTS+IS S  N N  E+++
Sbjct: 477  LRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVE 536

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F +M +  +  +S  +  +L     L  L  G+EIHC  L+ GF  +  +A  ++DMY+
Sbjct: 537  LFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYA 596

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
              G+L+SA+ VF +   K L  +  MI  + ++G GK A+ LF ++      PD I+F A
Sbjct: 597  CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 656

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            LL AC ++GL++EG  +   M  +Y + P  EHY C+VD+LG+A  + EA++F++ M  +
Sbjct: 657  LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 716

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            P A +W ALL +CR H   E  EIA++RL +LEP N  N  L+ N+ A   RW DVE++R
Sbjct: 717  PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 776

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM-KKLGYVPDT 988
              M   G++     SWI++D  VH F+A    HP + EIY +L  +  ++ +++GYV DT
Sbjct: 777  AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADT 836

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            + V  ++DE EK ++L  H+E++AI YG
Sbjct: 837  KFVLHNVDEGEKVQMLHGHSERIAIAYG 864


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/600 (36%), Positives = 330/600 (55%), Gaps = 45/600 (7%)

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            G +  A  +FN++ +    P   T N ++ G+      +  +   + M   G  P+  + 
Sbjct: 26   GSLPYARLVFNQIPN----PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTF 81

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              + ++     +L  G++ H +  + G   D Y+  +LM+MY    CL +A++VFD    
Sbjct: 82   PSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFD---- 134

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
                                   KM+N+         +VSW +++  Y+ W    EA+ +
Sbjct: 135  -----------------------KMVNK--------SVVSWATMIGAYAQWDLPHEAIKL 163

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
               M+   I  N+  W  +I+G +++ +Y E+L  F +MQ   +K +  TM+SLL  C  
Sbjct: 164  FRRME---IASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTH 220

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            LG L+ GK +H    K     D  + T L+DMY+K G+++SA  VF++   K + +W  +
Sbjct: 221  LGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTAL 280

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I+G A+ G G +A+ LFHE+  +  +PDAITF  +LAAC ++GLV EG  YF+SM   Y 
Sbjct: 281  IVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYG 340

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P+IEHY CMVD+LG+AG + EA D I+ MP  PD  +   LL +CRIHG+L  AE A+
Sbjct: 341  IQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAA 400

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            ++L +L+P N   Y L+ N+ +    WE  +++R  M E  +K     S I++  +VH F
Sbjct: 401  QQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEF 460

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                  HP + EIY  L  ++  +K  GYVPD   V  D+DE+EK   L  H+EKLAI +
Sbjct: 461  VKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAF 520

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ T    PIRV+KN RVCSDCH+A K++S V  REI +RD  RFHHF +G CSC D W
Sbjct: 521  GLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 164/336 (48%), Gaps = 10/336 (2%)

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            AI  ++ M          T   + ++C   G   EGKQ+H +  K    S+  + N L+
Sbjct: 61  QAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLM 117

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           +MYS    L  A +VFD M + ++ SW +MI +Y        A  LF +M    I  ++ 
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRM---EIASNLF 174

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            WN +++GH     Y+  L+L   MQ  G + +  +++ +L A T L  L+ G+  H YI
Sbjct: 175 CWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYI 234

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            +  ++ D+ +GT+L+DMY K   +++A  VF  M  ++++ W +LI G    G  + A 
Sbjct: 235 EKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKAL 294

Query: 619 KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISG 677
           ++ ++M+  E+KPD +++  +++  S  G   E +   + M N  GI P++  +  ++  
Sbjct: 295 ELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDM 354

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +     E+      +Q   + P+   +  LL  C
Sbjct: 355 LGRAGRIAEAEDL---IQNMPMAPDYFVLVGLLSAC 387



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 31/225 (13%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS---------------- 356
           G ++H    K GF  D +++  LMN Y  C  + SA K+F ++                 
Sbjct: 94  GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 153

Query: 357 -DLEDDLL--------------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
            DL  + +              WN +I   + +  +E A+ LF EMQ S  K    T+  
Sbjct: 154 WDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 213

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L AC  +GA   GK +H Y+ K  +E ++++   L+ MY++   +E A RVF  M + +
Sbjct: 214 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 273

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           + +W ++I      G    A  LF++M  S ++PD IT+  +L+ 
Sbjct: 274 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 318



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 138/344 (40%), Gaps = 40/344 (11%)

Query: 151 TRTSINQ--NRHSHKPNSITNSPTSLALPPTDTLAKQAQL--SCISSGFCFLNETNKFRC 206
            R   NQ  N  +   NSI    T+  LP    L  Q  +        F F +       
Sbjct: 31  ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV 90

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L   K  H    K+G  + SD  ++ +L+  Y   G   SA K F    ++S   W++ +
Sbjct: 91  LCEGKQLHCHSTKLG--FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMI 148

Query: 266 EDYESFG-------------------------------GEVQELLEVWGELHGKGVIFRS 294
             Y  +                                 + +E L ++ E+   GV    
Sbjct: 149 GAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 208

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
             +  +L  CT L A  LG  +H  + K   + DV L  AL++ Y KC  +ESA ++F E
Sbjct: 209 VTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQE 268

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           + + +D + W  +I+      +   A++LF EMQ S  K  + T V +L AC+  G  +E
Sbjct: 269 MPE-KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNE 327

Query: 415 G-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           G    +    K  ++ ++    C++ M  R  ++  A  +  +M
Sbjct: 328 GIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 371



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 11/212 (5%)

Query: 730 LKNGFIKDAYVATGLIDMYS--KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
           L+     D + A+ ++   +   SG+L  AR VF +  N T  + N +I G+      ++
Sbjct: 2   LRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQ 61

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
           AIL +  ++  G  PD  TF +L  +C   G++ EG K     ST           + ++
Sbjct: 62  AILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEG-KQLHCHSTKLGFASDAYIQNTLM 117

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE-PCNS 906
           ++    G L  A      M  K     W  ++G+   +   +    A +   ++E   N 
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNK-SVVSWATMIGA---YAQWDLPHEAIKLFRRMEIASNL 173

Query: 907 ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
             +N+M+N     + +E+   L + M   GVK
Sbjct: 174 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVK 205


>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
 gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/553 (37%), Positives = 314/553 (56%), Gaps = 39/553 (7%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M+     P+  + S VL+A  +L  +  G+  HG   + G   +L++   ++++Y     
Sbjct: 1    MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
            + +A  +F+ M  R                                   D V+WN +++ 
Sbjct: 61   MGDAMLLFEKMPQR-----------------------------------DAVTWNIVIAQ 85

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
             +  G    A      M N     NV +WTS+ISG +Q     E++  F++++ E ++PN
Sbjct: 86   LAKRGDIDGAYGFFLRMPNK----NVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPN 141

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              T+ S+L  C  LG L  G+ +H    K+GF ++ +V   LIDMY K G L++AR VF 
Sbjct: 142  EVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFY 201

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            +   +T+ SW+ MI G A++G  +EA+ LF E+++ G +P+ +TF  LL AC + GL++E
Sbjct: 202  EMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDE 261

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G ++F SM+ DY +IP IEHY C+VDL  +AG L+EA +FI +MP KP+  +WGALLG C
Sbjct: 262  GRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGC 321

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            ++H +++ AE A + L +L+P N   Y ++ N+ A + RWED  R+R  M + GVK    
Sbjct: 322  KVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKTSG 381

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
            WS I ++ +VH F A    HP   +I      L+ +MK+ GY P T  V  D++E+EK K
Sbjct: 382  WSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKTSVVLLDMEEKEKEK 441

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLA+V+GLM T    PIR++KN RVC DCH A K +S +  REI +RD  RFH
Sbjct: 442  FLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIISGIVSREIIVRDRNRFH 501

Query: 1063 HFREGECSCNDCW 1075
             FR+G+CSC D W
Sbjct: 502  CFRDGQCSCRDFW 514



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 8/313 (2%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L+AC K+     GK IHG   K    SNL + N ++++Y    ++  A  +F+ M   +
Sbjct: 16  VLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRD 75

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
             +WN +I+     G +D A+  F +M +  ++    +W  ++SG    G     + L  
Sbjct: 76  AVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVR----SWTSMISGFVQCGKPNEAIDLFM 131

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            ++    RPN  +V  VL A  +L  L  GR  H Y  ++G   +++V  +L+DMYVK  
Sbjct: 132 KLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCG 191

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
           CL+NA+ VF  M+ R +V+W+++I+G    G    A  + ++M +  +KP+ V++  L+ 
Sbjct: 192 CLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLH 251

Query: 642 GYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             S  G   E       M  + G+ P +  +  ++    +     E+ +F + M    IK
Sbjct: 252 ACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMP---IK 308

Query: 701 PNSTTMSSLLQTC 713
           PN     +LL  C
Sbjct: 309 PNGVVWGALLGGC 321



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 69/343 (20%)

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           + +LK C KL     G  +H    K GF  ++ L+  ++N YG C ++  A  LF ++  
Sbjct: 14  SFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQ 73

Query: 358 LEDDLLWNEII---------------MVKLRNE----------------KWENAIKLFRE 386
             D + WN +I                +++ N+                K   AI LF +
Sbjct: 74  -RDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMK 132

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           ++  + +    T+V +L ACA +G    G+ +H Y  KS  + N+ VCN LI MY +   
Sbjct: 133 LEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGC 192

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           LE A RVF  M++  + SW++MI+     G  + A  LF++                   
Sbjct: 193 LENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSE------------------- 233

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN-GLDY 565
                           M  LG +PNG +   +L A + + L+  GR     +  + G+  
Sbjct: 234 ----------------MIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIP 277

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISG 607
            +     ++D++ +   L+ A E   +M  + N V W +L+ G
Sbjct: 278 QIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGG 320



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 4/243 (1%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           GD   A   F    +++   W+S +  +   G +  E ++++ +L  + V      +  +
Sbjct: 90  GDIDGAYGFFLRMPNKNVRSWTSMISGFVQCG-KPNEAIDLFMKLEDEAVRPNEVTVVSV 148

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L  C  L    LG  VH    K GF  +VH+   L++ Y KC  +E+A ++F E+ +   
Sbjct: 149 LAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEE-RT 207

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
            + W+ +I     + + E A+ LF EM     K    T + +L AC+ +G   EG++   
Sbjct: 208 VVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFA 267

Query: 421 YVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYV 478
            +     +   +    C++ ++SR   LE A     SM    N   W +++        +
Sbjct: 268 SMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNI 327

Query: 479 DVA 481
           D+A
Sbjct: 328 DLA 330


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
            mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/674 (34%), Positives = 356/674 (52%), Gaps = 52/674 (7%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV--DVAWSLFNKMNSSR 492
            N LI+ Y RN+  + A  +F  M   +L S+N++I+  +   +   D A +L     S  
Sbjct: 52   NALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAAL----ASIP 107

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + P ++++  LL G+  HG   + + L   M       N  + +V+L        L  GR
Sbjct: 108  LPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPER----NHVTYTVLLGG-----FLDAGR 158

Query: 553  ESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
             +    L + + D D+   T+++  Y +   +  A+ +FD M  RN+V+W ++ISGY   
Sbjct: 159  VNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN 218

Query: 612  GLFVNAKKMLNQMEEEEIKPDL--VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP--- 666
            G  + A+K+       E+ PD   VSW +++ GY   G  ++A  + + M +  +     
Sbjct: 219  GKVILARKLF------EVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNA 272

Query: 667  ------------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                                    +  TW+++I    QNE   E+L  F +M    I+PN
Sbjct: 273  MMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPN 332

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
             T+  S+L  C  L     G+E+H   L+  F  D +  + LI MY K GNL  A+ VF 
Sbjct: 333  YTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFN 392

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
                K +  WN MI G+A +G G+EA+ +F +L      PD IT+  +L AC  +G V+E
Sbjct: 393  MFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKE 452

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G + F+SM  + +I     HYSCMVDLLG+AG +DEA D I  MP +PDA IWGAL+G+C
Sbjct: 453  GREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGAC 512

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            R+H + E AE+A+++L +LEP ++  Y L+ ++   + RWED   +R  +    +     
Sbjct: 513  RMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPG 572

Query: 943  WSWIQIDQIVHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
             SWI+ +++VH+F S +   HP    I   L  L   + + GY  D   V  D+DEE+K 
Sbjct: 573  CSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKA 632

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            + L  H+E+ A+ YGL+K  +  PIRV+KN RVC DCH+A K ++ +  REI LRD  RF
Sbjct: 633  QSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRF 692

Query: 1062 HHFREGECSCNDCW 1075
            HHF++G CSC D W
Sbjct: 693  HHFKDGLCSCRDYW 706



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 159/362 (43%), Gaps = 39/362 (10%)

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A KLF EM       ++RT   ML    + G   E + +   + K     N+     +IS
Sbjct: 162 ARKLFDEM--PDKDVVART--AMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMIS 213

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP---- 495
            Y++N K+ LA ++F+ M D N  SW +M+  Y   G+V+ A  LFN M    +      
Sbjct: 214 GYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAM 273

Query: 496 -----------------------DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                                  D  TW+ ++  +  +      L+  R M   G RPN 
Sbjct: 274 MVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNY 333

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
           +S   +L     L    YGRE H  +LR   D D++  ++L+ MY+K   L  A+ VF+ 
Sbjct: 334 TSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNM 393

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
            + +++V WNS+I+GY   GL   A  + + +    + PD +++  +++  S  G+ KE 
Sbjct: 394 FEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEG 453

Query: 653 LVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
             I + M  NS I      ++ ++    +     E+L     M    ++P++    +L+ 
Sbjct: 454 REIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMP---VEPDAIIWGALMG 510

Query: 712 TC 713
            C
Sbjct: 511 AC 512



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 1/173 (0%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A+M  +G+   V++A  +F  +    DD  W+ +I V  +NE    A+  FREM     +
Sbjct: 272 AMMVGFGQHGMVDAAKAMFERMC-ARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIR 330

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               + + +L  CA +     G+++H  +L+ + ++++   + LI+MY +   L+ A RV
Sbjct: 331 PNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRV 390

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           F+  +  ++  WNSMI+ Y   G  + A  +F+ +  +R+ PD IT+  +L+ 
Sbjct: 391 FNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTA 443



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 48/305 (15%)

Query: 218 IKMGKIWNSDDMVKSLIFH--------YLEFGD--FTSAAKAFFLYF-SRSYADWSSFLE 266
           I+ G + +++D+  ++  H         + FG      AAKA F    +R    WS+ ++
Sbjct: 247 IQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIK 306

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            YE     + E L  + E+  +G+         IL +C  L     G E+HA++++  FD
Sbjct: 307 VYEQ-NEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFD 365

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            DV    AL+  Y KC +++ A ++F+ + + +D ++WN +I    ++   E A+ +F +
Sbjct: 366 TDVFAVSALITMYIKCGNLDKAKRVFN-MFEPKDVVMWNSMITGYAQHGLGEEALGIFDD 424

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNN 445
           ++ +       T + +L AC+  G   EG++I   + + S++    +  +C++ +  R  
Sbjct: 425 LRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRA- 483

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
                                         G VD A  L N M    ++PD I W  L+ 
Sbjct: 484 ------------------------------GLVDEALDLINNMP---VEPDAIIWGALMG 510

Query: 506 GHFTH 510
               H
Sbjct: 511 ACRMH 515


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/624 (35%), Positives = 342/624 (54%), Gaps = 48/624 (7%)

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            ++ +WN +++     G     L     ++ LG  P  SS    +++ + L  L  GR SH
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
                  G + DL+V ++L+DMY K   L++A+ +FD +  RN+V+W S+I+GY       
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225

Query: 616  NAKKMLNQMEEEEIKPD-----------LVS----------------------------- 635
            NA  +     EEE + +           +VS                             
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 1285

Query: 636  ---WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
                N+L+  Y+  GQ   +  +   M+      + ++W S+I+   Q+    E+L+ F 
Sbjct: 1286 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEK----DDISWNSMIAVYAQSGLSGEALEVFH 1341

Query: 693  QM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             M +   ++ N+ T+S++L  C   G L+ GK IH   +K     +  V T +IDMY K 
Sbjct: 1342 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC 1401

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G ++ A++ F +   K + SW  M+ G+ ++G  KEA+ +F++++  G +P+ ITF ++L
Sbjct: 1402 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVL 1461

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            AAC ++GLVEEGW +F++M   Y+I P IEHY CMVDL G+AG L+EA++ I+ M  KPD
Sbjct: 1462 AACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPD 1521

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
              +WG+LLG+CRIH +++  EIA+++LF+L+P N   Y L+ NL A + RW DVER+R  
Sbjct: 1522 FVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRML 1581

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M    +     +S +++   VHVF      HP    IY  L  L  E++K+GYVP+   V
Sbjct: 1582 MKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSV 1641

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D+DEEEK  +L  H+EKLA+ +G+M +     I +IKN RVC DCHT  K +S +  R
Sbjct: 1642 LHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHR 1701

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            +  +RD  RFHHF++G CSC D W
Sbjct: 1702 DFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 219/459 (47%), Gaps = 77/459 (16%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ C     F   +QIH  +++S L ++  +   LI +YS + ++  A  +F  +++  
Sbjct: 33  LLQNCKN---FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN-- 87

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                            P   TWN ++  +  +G  +  L L +
Sbjct: 88  ---------------------------------PCTFTWNLIIRANTINGLSEQALMLYK 114

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M   G   +  +   V++A T    +  G+  HG +++ G   D++V  +L+D Y K  
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCG 174

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             + A +VF+ M+ RN+V                                   SW +++S
Sbjct: 175 HTRFALKVFEKMRVRNVV-----------------------------------SWTTVIS 199

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
           G    G  +EA  I   + +     NVV+WT++I+G ++N+   E+L+ F +MQ E+I P
Sbjct: 200 GLISCGDLQEARRIFDEIPSK----NVVSWTAMINGYIRNQQPEEALELFKRMQAENIFP 255

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           N  TM SL++ C  +G+L  G+ IH   +KN      Y+ T LIDMYSK G++K A EVF
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVF 315

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                K+L +WN MI    ++G G+EA+ LF E+     +PDAITF  +L AC +   V+
Sbjct: 316 ETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVK 375

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
           EG  YF  M+  Y I P  EHY CM +L  ++  LDEA+
Sbjct: 376 EGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 220/474 (46%), Gaps = 49/474 (10%)

Query: 250  FFLYFSRSYA-DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLM 308
            F+ Y  +S    W+S + D    GG+  E L  +  L   G+I         +K C+ L 
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLAR-GGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALC 1156

Query: 309  AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
                G   H      GF+ D+ +  AL++ Y KC  ++ A  LF E+  L + + W  +I
Sbjct: 1157 DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP-LRNVVSWTSMI 1215

Query: 369  MVKLRNEKWENAIKLFR-----EMQFSSAKAI---SRTIVKMLQACAKVGAFHEGKQIHG 420
               ++NE+ +NA+ LF+     E +      +   S  +V +L AC++V      + +HG
Sbjct: 1216 TGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHG 1275

Query: 421  YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
            +V+K   + ++ V N L+  Y++  +  ++ +VFD M++ +  SWNSMI+ Y   G    
Sbjct: 1276 FVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGE 1335

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            A  +F+ M                                  ++ +G R N  ++S VL 
Sbjct: 1336 ALEVFHGM----------------------------------VRHVGVRYNAVTLSAVLL 1361

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
            A      L+ G+  H  +++  L+Y++ VGTS++DMY K   ++ A++ FD MK +N+ +
Sbjct: 1362 ACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKS 1421

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
            W ++++GY   G    A  +  +M    +KP+ +++ S+++  S  G  +E     + MK
Sbjct: 1422 WTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMK 1481

Query: 661  NS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +   I P +  +  ++    +     E+     +M+   +KP+     SLL  C
Sbjct: 1482 HKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK---MKPDFVVWGSLLGAC 1532



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +I+ G   D  L   L++ Y     +  A  LF ++ +      WN II     N
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN-PCTFTWNLIIRANTIN 103

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              E A+ L++ M      A   T   +++AC    +   GK +HG ++K     ++ V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI  Y +      A +VF+ M+  N+ SW ++IS     G +  A  +F+++ S    
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSK--- 220

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            ++++W  +++G+  +   +  L L + MQ+    PN  ++  +++A TE+ +L  GR  
Sbjct: 221 -NVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI 279

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H Y ++N ++  +Y+GT+L+DMY K   +++A EVF+ M  +++  WNS+I+     GL 
Sbjct: 280 HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLG 339

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTS 673
             A  + ++ME   +KPD +++  ++         KE       M ++ GI P    +  
Sbjct: 340 QEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYEC 399

Query: 674 LISGSLQNENYRESLK 689
           +     ++ N  E+ K
Sbjct: 400 MTELYARSNNLDEAFK 415



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 155/322 (48%), Gaps = 34/322 (10%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           ++  HA++I+ G + N   + + LI  Y   G    A   F+   +     W+  +    
Sbjct: 43  LRQIHAKIIRSG-LSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR-AN 100

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           +  G  ++ L ++  +  +G+         ++K CT  ++  LG  VH SLIK GF  DV
Sbjct: 101 TINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDV 160

Query: 330 HLKCALMNFYGK-------------------------------CRDVESANKLFSEVSDL 358
            ++  L++FY K                               C D++ A ++F E+   
Sbjct: 161 FVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS- 219

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
           ++ + W  +I   +RN++ E A++LF+ MQ  +      T+V +++AC ++G    G+ I
Sbjct: 220 KNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI 279

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H Y +K+ +E  + +   LI MYS+   ++ A  VF++M   +L +WNSMI+S    G  
Sbjct: 280 HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLG 339

Query: 479 DVAWSLFNKMNSSRIQPDIITW 500
             A +LF++M    ++PD IT+
Sbjct: 340 QEALNLFSEMERVNVKPDAITF 361



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 194/445 (43%), Gaps = 48/445 (10%)

Query: 175  ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-L 233
            AL    +L K   +   SS  C +   +    L S +  H Q    G  + +D  V S L
Sbjct: 1126 ALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFG--FETDLFVSSAL 1183

Query: 234  IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY---ESFGGEV---QELLEVWGELH- 286
            I  Y + G    A   F     R+   W+S +  Y   E     +   ++ LE   E+  
Sbjct: 1184 IDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVED 1243

Query: 287  GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
            G  V   S ++  +L  C+++    +   VH  ++K+GFD  + +   LM+ Y KC    
Sbjct: 1244 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 1303

Query: 347  SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQA 405
             + K+F  + + +DD+ WN +I V  ++     A+++F  M +    +  + T+  +L A
Sbjct: 1304 VSKKVFDWMEE-KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLA 1362

Query: 406  CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            CA  GA   GK IH  V+K  LE N+ V   +I MY +  ++E+A + FD MK+ N+ SW
Sbjct: 1363 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 1422

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
             +M++ Y   G    A  +F KM  + ++P+ IT+  +L+     G  +        M+ 
Sbjct: 1423 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMK- 1481

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
                                         H Y +  G+++       ++D++ +  CL  
Sbjct: 1482 -----------------------------HKYDIEPGIEHY----GCMVDLFGRAGCLNE 1508

Query: 586  AQEVFDNMKNR-NIVAWNSLISGYC 609
            A  +   MK + + V W SL+ G C
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLL-GAC 1532



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 144/348 (41%), Gaps = 57/348 (16%)

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV--NAK--KMLNQMEEEEIKP----DL 633
           CL    +VF + KN  +    ++ +    K LF+  N K  K L Q+  + I+     D 
Sbjct: 4   CLSYTHDVFPS-KNIPLTPRGNIRAK---KALFLLQNCKNFKHLRQIHAKIIRSGLSNDQ 59

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           +    L+  YS  G+   A+++ + ++N    P   TW  +I  +  N    ++L  +  
Sbjct: 60  LLTRKLIHLYSTHGRIAYAILLFYQIQN----PCTFTWNLIIRANTINGLSEQALMLYKN 115

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK--- 750
           M  + I  +  T   +++ C     +  GK +H   +K GF  D +V   LID Y K   
Sbjct: 116 MVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGH 175

Query: 751 ----------------------------SGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
                                        G+L+ AR +F +  +K + SW  MI G+   
Sbjct: 176 TRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRN 235

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE- 841
              +EA+ LF  +      P+  T  +L+ AC   G++  G         DY I   IE 
Sbjct: 236 QQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH-----DYAIKNCIEI 290

Query: 842 ---HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
                + ++D+  K G + +A +   TMP K   T W +++ S  +HG
Sbjct: 291 GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVHG 337



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 15/281 (5%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW-GELHGKGV 290
            +L+  Y + G    + K F     +    W+S +  Y    G   E LEV+ G +   GV
Sbjct: 1291 TLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQ-SGLSGEALEVFHGMVRHVGV 1349

Query: 291  IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
             + +  L+ +L  C    A   G  +H  +IK   +++V +  ++++ Y KC  VE A K
Sbjct: 1350 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 1409

Query: 351  LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
             F  + + ++   W  ++     + + + A+ +F +M  +  K    T V +L AC+  G
Sbjct: 1410 TFDRMKE-KNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAG 1468

Query: 411  AFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSS 464
               EG        H Y ++  +E       C++ ++ R   L  A  +   MK   +   
Sbjct: 1469 LVEEGWHWFNAMKHKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 1524

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            W S++ +      VD+      K+    + PD   +  LLS
Sbjct: 1525 WGSLLGACRIHKNVDLGEIAAQKL--FELDPDNCGYYVLLS 1563


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/626 (34%), Positives = 343/626 (54%), Gaps = 48/626 (7%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            + ++ +WN +++     G     L     ++ LG  P  SS    +++ + L  L  GR 
Sbjct: 1977 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 2036

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            SH      G + DL+V ++L+DMY K   L++A+ +FD +  RN+V+W S+I+GY     
Sbjct: 2037 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 2096

Query: 614  FVNAKKMLNQMEEEEIKPD-----------LVS--------------------------- 635
              NA  +     EEE + +           +VS                           
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156

Query: 636  -----WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
                  N+L+  Y+  GQ   +  +   M+      + ++W S+I+   Q+    E+L+ 
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK----DDISWNSMIAVYAQSGLSGEALEV 2212

Query: 691  FIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            F  M +   ++ N+ T+S++L  C   G L+ GK IH   +K     +  V T +IDMY 
Sbjct: 2213 FHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 2272

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G ++ A++ F +   K + SW  M+ G+ ++G  KEA+ +F++++  G +P+ ITF +
Sbjct: 2273 KCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVS 2332

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +LAAC ++GLVEEGW +F++M   Y+I P IEHY CMVDL G+AG L+EA++ I+ M  K
Sbjct: 2333 VLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMK 2392

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            PD  +WG+LLG+CRIH +++  EIA+++LF+L+P N   Y L+ NL A + RW DVER+R
Sbjct: 2393 PDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMR 2452

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              M    +     +S +++   VHVF      HP    IY  L  L  E++K+GYVP+  
Sbjct: 2453 MLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMT 2512

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V  D+DEEEK  +L  H+EKLA+ +G+M +     I +IKN RVC DCHT  K +S + 
Sbjct: 2513 SVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLV 2572

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
             R+  +RD  RFHHF++G CSC D W
Sbjct: 2573 HRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  223 bits (567), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 219/459 (47%), Gaps = 77/459 (16%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ C     F   +QIH  +++S L ++  +   LI +YS + ++  A  +F  +++  
Sbjct: 33  LLQNCKN---FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN-- 87

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                            P   TWN ++  +  +G  +  L L +
Sbjct: 88  ---------------------------------PCTFTWNLIIRANTINGLSEQALMLYK 114

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M   G   +  +   V++A T    +  G+  HG +++ G   D++V  +L+D Y K  
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCG 174

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             + A +VF+ M+ RN+V                                   SW +++S
Sbjct: 175 HTRFALKVFEKMRVRNVV-----------------------------------SWTTVIS 199

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
           G    G  +EA  I   + +     NVV+WT++I+G ++N+   E+L+ F +MQ E+I P
Sbjct: 200 GLISCGDLQEARRIFDEIPSK----NVVSWTAMINGYIRNQQPEEALELFKRMQAENIFP 255

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           N  TM SL++ C  +G+L  G+ IH   +KN      Y+ T LIDMYSK G++K A EVF
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVF 315

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                K+L +WN MI    ++G G+EA+ LF E+     +PDAITF  +L AC +   V+
Sbjct: 316 ETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVK 375

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
           EG  YF  M+  Y I P  EHY CM +L  ++  LDEA+
Sbjct: 376 EGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 225/482 (46%), Gaps = 49/482 (10%)

Query: 242  DFTSAAKAFFLYFSRSYA-DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
            D ++ A  F+ Y  +S    W+S + D  + GG+  E L  +  L   G+I         
Sbjct: 1963 DHSNLATWFYKYVDKSNVHSWNSVIADL-ARGGDSVEALRAFSSLRKLGLIPTRSSFPCT 2021

Query: 301  LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
            +K C+ L     G   H      GF+ D+ +  AL++ Y KC  ++ A  LF E+  L +
Sbjct: 2022 IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP-LRN 2080

Query: 361  DLLWNEIIMVKLRNEKWENAIKLFR-----EMQFSSAKAI---SRTIVKMLQACAKVGAF 412
             + W  +I   ++NE+ +NA+ LF+     E +      +   S  +V +L AC++V   
Sbjct: 2081 VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGK 2140

Query: 413  HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
               + +HG+V+K   + ++ V N L+  Y++  +  ++ +VFD M++ +  SWNSMI+ Y
Sbjct: 2141 GITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVY 2200

Query: 473  TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
               G    A  +F+ M                                  ++ +G R N 
Sbjct: 2201 AQSGLSGEALEVFHGM----------------------------------VRHVGVRYNA 2226

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             ++S VL A      L+ G+  H  +++  L+Y++ VGTS++DMY K   ++ A++ FD 
Sbjct: 2227 VTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDR 2286

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
            MK +N+ +W ++++GY   G    A  +  +M    +KP+ +++ S+++  S  G  +E 
Sbjct: 2287 MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 2346

Query: 653  LVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
                + MK+   I P +  +  ++    +     E+     +M+   +KP+     SLL 
Sbjct: 2347 WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK---MKPDFVVWGSLLG 2403

Query: 712  TC 713
             C
Sbjct: 2404 AC 2405



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +I+ G   D  L   L++ Y     +  A  LF ++ +      WN II     N
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN-PCTFTWNLIIRANTIN 103

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              E A+ L++ M      A   T   +++AC    +   GK +HG ++K     ++ V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI  Y +      A +VF+ M+  N+ SW ++IS     G +  A  +F+++ S    
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSK--- 220

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            ++++W  +++G+  +   +  L L + MQ+    PN  ++  +++A TE+ +L  GR  
Sbjct: 221 -NVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI 279

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H Y ++N ++  +Y+GT+L+DMY K   +++A EVF+ M  +++  WNS+I+     GL 
Sbjct: 280 HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLG 339

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTS 673
             A  + ++ME   +KPD +++  ++         KE       M ++ GI P    +  
Sbjct: 340 QEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYEC 399

Query: 674 LISGSLQNENYRESLK 689
           +     ++ N  E+ K
Sbjct: 400 MTELYARSNNLDEAFK 415



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 34/318 (10%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA++I+ G + N   + + LI  Y   G    A   F+   +     W+  +    +  G
Sbjct: 47  HAKIIRSG-LSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR-ANTING 104

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
             ++ L ++  +  +G+         ++K CT  ++  LG  VH SLIK GF  DV ++ 
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 334 ALMNFYGK-------------------------------CRDVESANKLFSEVSDLEDDL 362
            L++FY K                               C D++ A ++F E+   ++ +
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPS-KNVV 223

Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
            W  +I   +RN++ E A++LF+ MQ  +      T+V +++AC ++G    G+ IH Y 
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
           +K+ +E  + +   LI MYS+   ++ A  VF++M   +L +WNSMI+S    G    A 
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 483 SLFNKMNSSRIQPDIITW 500
           +LF++M    ++PD IT+
Sbjct: 344 NLFSEMERVNVKPDAITF 361



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 194/445 (43%), Gaps = 48/445 (10%)

Query: 175  ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-L 233
            AL    +L K   +   SS  C +   +    L S +  H Q    G  + +D  V S L
Sbjct: 1999 ALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFG--FETDLFVSSAL 2056

Query: 234  IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY---ESFGGEV---QELLEVWGELH- 286
            I  Y + G    A   F     R+   W+S +  Y   E     +   ++ LE   E+  
Sbjct: 2057 IDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVED 2116

Query: 287  GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
            G  V   S ++  +L  C+++    +   VH  ++K+GFD  + +   LM+ Y KC    
Sbjct: 2117 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 2176

Query: 347  SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQA 405
             + K+F  + + +DD+ WN +I V  ++     A+++F  M +    +  + T+  +L A
Sbjct: 2177 VSKKVFDWMEE-KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLA 2235

Query: 406  CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            CA  GA   GK IH  V+K  LE N+ V   +I MY +  ++E+A + FD MK+ N+ SW
Sbjct: 2236 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 2295

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
             +M++ Y   G    A  +F KM  + ++P+ IT+  +L+     G  +        M+ 
Sbjct: 2296 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMK- 2354

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
                                         H Y +  G+++       ++D++ +  CL  
Sbjct: 2355 -----------------------------HKYDIEPGIEH----YGCMVDLFGRAGCLNE 2381

Query: 586  AQEVFDNMKNR-NIVAWNSLISGYC 609
            A  +   MK + + V W SL+ G C
Sbjct: 2382 AYNLIKRMKMKPDFVVWGSLL-GAC 2405



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 45/283 (15%)

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           L+  YS  G+   A+++ + ++N    P   TW  +I  +  N    ++L  +  M  + 
Sbjct: 65  LIHLYSTHGRIAYAILLFYQIQN----PCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK-------- 750
           I  +  T   +++ C     +  GK +H   +K GF  D +V   LID Y K        
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFAL 180

Query: 751 -----------------------SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
                                   G+L+ AR +F +  +K + SW  MI G+      +E
Sbjct: 181 KVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 240

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE----HY 843
           A+ LF  +      P+  T  +L+ AC   G++  G         DY I   IE      
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH-----DYAIKNCIEIGVYLG 295

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           + ++D+  K G + +A +   TMP K   T W +++ S  +HG
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVHG 337



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 7/277 (2%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW-GELHGKGV 290
            +L+  Y + G    + K F     +    W+S +  Y    G   E LEV+ G +   GV
Sbjct: 2164 TLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQ-SGLSGEALEVFHGMVRHVGV 2222

Query: 291  IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
             + +  L+ +L  C    A   G  +H  +IK   +++V +  ++++ Y KC  VE A K
Sbjct: 2223 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 2282

Query: 351  LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
             F  + + ++   W  ++     + + + A+ +F +M  +  K    T V +L AC+  G
Sbjct: 2283 TFDRMKE-KNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAG 2341

Query: 411  AFHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
               EG    +    K  +E  +    C++ ++ R   L  A  +   MK   +   W S+
Sbjct: 2342 LVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 2401

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            + +      VD+      K+    + PD   +  LLS
Sbjct: 2402 LGACRIHKNVDLGEIAAQKL--FELDPDNCGYYVLLS 2436


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/759 (30%), Positives = 386/759 (50%), Gaps = 93/759 (12%)

Query: 367  IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
            +I   +R  +   A++L+ EM+     A    +  ++ AC K+ A  EG+++H +++ + 
Sbjct: 1    MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 427  LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
              +++ +   L+ MY++   L+ A RVF+ M+                            
Sbjct: 61   FRTDIPLETALLQMYAKCGSLDDAKRVFEGME---------------------------- 92

Query: 487  KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
                     D+  W+ +++ +   G  +  + L R M + G  PN  + +  L     + 
Sbjct: 93   -------IKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVA 145

Query: 547  LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
             L  GR  H  IL + +  D  +  SL++MY+K D +  A++VF+ MK RN+ ++ ++IS
Sbjct: 146  GLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMIS 205

Query: 607  GYCFKGLFVNAKKMLNQMEE-EEIKPD--------------------------------- 632
             Y   G    A ++ ++M + E I+P+                                 
Sbjct: 206  AYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFD 265

Query: 633  --LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
              +V  N+LV+ Y   G   EA  +   M       NV++WTS+I+   Q+ N +E+L  
Sbjct: 266  TNVVVQNALVTMYGKCGSPVEARKVFDSMTAR----NVISWTSMIAAYAQHGNPQEALNL 321

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F +M   D++P+  + SS L  C  LG L  G+EIH   ++   +    + T L+ MY++
Sbjct: 322  FKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAN-LASPQMETSLLSMYAR 377

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             G+L  AR VF +   +   S N MI  F  +G  K+A+ ++ ++ + G   D ITF ++
Sbjct: 378  CGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSV 437

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L AC ++ LV +   +  S+  D+ ++P +EHY CMVD+LG++G L +A + + TMP++ 
Sbjct: 438  LVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQA 497

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            DA  W  LL  C+ HG L+  E A+R++F+L P  +  Y  + N+ A + R++D  R+R 
Sbjct: 498  DAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRK 557

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG-------EIYFELYHLVSEMKKLG 983
             M+E GV   +  S+I+ID  +H+F++ G      G        +   L  L+  MK+ G
Sbjct: 558  EMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQAG 617

Query: 984  YVPDTRCVYQD----IDEEEKGKVLLSHTEKLAIVYGLMKTK---SRAPIRVIKNTRVCS 1036
            YVPDTR VY +      EEEK + L  H+E+LAI YGL+  K      P+RV+ + RVCS
Sbjct: 618  YVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCS 677

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             CH+A K +S +  + IF+RDG+RFHHF +G CSC D W
Sbjct: 678  GCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 8/310 (2%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
           C L        L+  ++ H Q I   K+   D +  SL+  YL+  +   A K F    +
Sbjct: 136 CALGGCASVAGLADGRAIH-QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKA 194

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHG-KGVIFRSRILTIILKLCTKLMAFWLGV 314
           R+   +++ +  Y    GE  E LE++  +   + +   +     IL     L     G 
Sbjct: 195 RNVRSYTAMISAYVQ-AGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGR 253

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           +VH  L  RGFD +V ++ AL+  YGKC     A K+F  ++   + + W  +I    ++
Sbjct: 254 KVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMT-ARNVISWTSMIAAYAQH 312

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              + A+ LF+ M    +     +    L ACA +GA  EG++IH  V+++ L S   + 
Sbjct: 313 GNPQEALNLFKRMDVEPSGV---SFSSALNACALLGALDEGREIHHRVVEANLASP-QME 368

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+SMY+R   L+ A RVF+ MK  +  S N+MI+++T  G    A  ++ KM    I 
Sbjct: 369 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIP 428

Query: 495 PDIITWNCLL 504
            D IT+  +L
Sbjct: 429 ADGITFVSVL 438


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/678 (34%), Positives = 371/678 (54%), Gaps = 40/678 (5%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSS----WNSMISSYTGLGYVDVAWSLFNKMNS 490
            N L++   +   L+ AT++   +  +N +S    +N++I+ Y   G ++ A  LF+  + 
Sbjct: 146  NHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHH 205

Query: 491  SRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                  I+TW  L++ H +H   +   L+L   M+  G  PN  + S +L A     ++ 
Sbjct: 206  HF--KTIVTWTSLIT-HLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVL 262

Query: 550  YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            +G++ H  I ++G D +++VGT+L+DMY K   + +A  VFD M  RN+V+WNS+I G+ 
Sbjct: 263  HGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 322

Query: 610  FKGLFVNAKKMLNQ-MEEEEIKPDLVSWNSLVSGYSIWGQ-----------SKEALVIIH 657
               L+  A  +    + E+ + P+ VS +S++S  +  G             K  LV + 
Sbjct: 323  HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLT 382

Query: 658  HMKNS-------------GIY-------PNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            ++ NS             G+         +VVTW  L+ G +QN+ + E+  +F  M++E
Sbjct: 383  YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE 442

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             I P+  + S++L +   L  L  G  IH   +K G++K+  +   LI MY+K G+L  A
Sbjct: 443  GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA 502

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             +VF    +  + SW  MI  + ++G   + I LF  +L  G +P  +TF  +L+AC ++
Sbjct: 503  YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 562

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            G VEEG  +F+SM   +++ P  EHY+CMVDLLG+AG+LDEA  FI +MP KP  ++WGA
Sbjct: 563  GRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGA 622

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+CR +G+L+    A+ RLF++EP N  NY L+ N+   S R E+   +R  M   GV
Sbjct: 623  LLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGV 682

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            +     SWI +  +  VF+A    H ++ EIY  L  L   +KK GYV +T  V   ++E
Sbjct: 683  RKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEE 742

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
             E+ + L  H+EKLA+ +GL+     +PIR+ KN R C  CHT  K  S +  REI +RD
Sbjct: 743  NEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRD 802

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFH F +G CSC D W
Sbjct: 803  INRFHRFADGFCSCGDYW 820



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 133/573 (23%), Positives = 252/573 (43%), Gaps = 52/573 (9%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFL--YF 254
            LN   + R L      H Q+I +    +   +  +LI  Y + G    A   F +  + 
Sbjct: 148 LLNTAIQTRSLKHATQIHTQII-INNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHH 206

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            ++   W+S +     F   +Q L  ++ ++   G        + IL      M    G 
Sbjct: 207 FKTIVTWTSLITHLSHFNMHLQAL-SLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H+ + K GFD ++ +  AL++ Y KC D+ SA ++F ++ +  + + WN +I+    N
Sbjct: 266 QLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPE-RNLVSWNSMIVGFFHN 324

Query: 375 EKWENAIKLFRE-MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
             ++ A+ +F++ ++  +      ++  +L ACA +G  + G+Q+HG V+K  L     V
Sbjct: 325 NLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYV 384

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N L+ MY +    +   ++F  + D ++ +WN ++     +G+V               
Sbjct: 385 MNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLV-----MGFV--------------- 424

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           Q D                ++        M+  G  P+ +S S VL +   L  L  G  
Sbjct: 425 QND---------------KFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTA 469

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H  I++ G   ++ +  SL+ MY K   L +A +VF+ +++ N+++W ++IS Y   G 
Sbjct: 470 IHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGC 529

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWT 672
                ++   M  E I+P  V++  ++S  S  G+ +E L   + MK    + P    + 
Sbjct: 530 ANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYA 589

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            ++   L    + +  K FI  +   +KP  +   +LL  C   G L+ G+E      + 
Sbjct: 590 CMVD-LLGRAGWLDEAKRFI--ESMPMKPTPSVWGALLGACRKYGNLKMGRE----AAER 642

Query: 733 GFIKDAYVATG---LIDMYSKSGNLKSAREVFR 762
            F  + Y       L +M ++SG L+ A EV R
Sbjct: 643 LFEMEPYNPGNYVLLANMCTRSGRLEEANEVRR 675



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 136/558 (24%), Positives = 219/558 (39%), Gaps = 95/558 (17%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD-LEDDLLWNEIIMVK 371
             ++H  +I   +     L   L+N Y KC  +  A  LFS      +  + W  +I   
Sbjct: 161 ATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHL 220

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
                   A+ LF +M+ S       T   +L A A       G+Q+H  + K   ++N+
Sbjct: 221 SHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANI 280

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V   L+ MY++   +  A RVFD M + NL SWNSMI  +      D A  +F      
Sbjct: 281 FVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK----- 335

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               D++    ++                         PN  SVS VL A   +  L +G
Sbjct: 336 ----DVLREKTVI-------------------------PNEVSVSSVLSACANMGGLNFG 366

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           R+ HG +++ GL    YV  SLMDMY K        ++F  + +R++V WN L+ G+   
Sbjct: 367 RQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQN 426

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWN---------------------------------- 637
             F  A      M  E I PD  S++                                  
Sbjct: 427 DKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCIL 486

Query: 638 -SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
            SL++ Y+  G   +A  +   +++     NV++WT++IS    +    + ++ F  M  
Sbjct: 487 GSLITMYAKCGSLVDAYQVFEGIEDH----NVISWTAMISAYQLHGCANQVIELFEHMLS 542

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNG-------KEIHCLCLKNGFIKDAYVATGLIDMYS 749
           E I+P+  T   +L  C   G ++ G       K+IH   +  G   + Y    ++D+  
Sbjct: 543 EGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH--DMNPG--PEHYAC--MVDLLG 596

Query: 750 KSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN---GKEAILLFHELLETGFQPDAI 805
           ++G L  A+        K   S W  ++     YGN   G+EA     E+    + P   
Sbjct: 597 RAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM--EPYNPG-- 652

Query: 806 TFTALLAACKNSGLVEEG 823
            +  L   C  SG +EE 
Sbjct: 653 NYVLLANMCTRSGRLEEA 670



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 3/164 (1%)

Query: 706 MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
           ++ LL T      L++  +IH   + N +    ++   LI++Y+K G L  A  +F  + 
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204

Query: 766 N--KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
           +  KT+ +W  +I   + +    +A+ LF+++  +G  P+  TF+++L+A   + +V  G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
            +   S+   +     I   + +VD+  K   +  A      MP
Sbjct: 265 -QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP 307


>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Brachypodium distachyon]
          Length = 585

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/528 (38%), Positives = 310/528 (58%), Gaps = 11/528 (2%)

Query: 551  GRESHGYILRNGLDY-DLYVGTSLMDMYVKNDC--LQNAQEVFDNMKNRNIVAWNSLISG 607
            G   H   LR+G    DL+V T+L++MY K     +  A+  FD    R++   N +++ 
Sbjct: 66   GASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAA 125

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
            Y  +G    A+K+ + M       DLVSWN+++ GY++ G    A  I    ++   +  
Sbjct: 126  YVARGEVAEARKVFDGMSGR----DLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAF-- 179

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
              +W+S+IS   +    +E+L+ + +M+   + P+  +M S+L  C  +G L  G E+H 
Sbjct: 180  --SWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHR 237

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
                N    D  + T L+DMY+K G+++++ +VF     K + +W+ MI+G A +G G +
Sbjct: 238  FVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHD 297

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF E++  G QP+ ITF  +L AC + GLV +G KYF SMS  + ++P +EHY CMV
Sbjct: 298  ALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMV 357

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG+++EA + IR+M FKPD  IW  LLG+CRIH ++E AE A  +L  L+P    
Sbjct: 358  DLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADG 417

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            +Y L+ N+ A +N WE V  +R ++    ++ V   S I+ +  VH F +    HP   E
Sbjct: 418  HYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEE 477

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY  L  ++  +++ GY P T  V QDIDE+ K + L  H+EKLAI +GL+ T +R+ +R
Sbjct: 478  IYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLR 537

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + KN R C DCH+A K +SL   R++ +RD  RFHHF EG+CSC D W
Sbjct: 538  ITKNLRACEDCHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 152/326 (46%), Gaps = 12/326 (3%)

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
           F++A    RT +  + A    G     +         A   ++ +CN +++ Y    ++ 
Sbjct: 78  FAAADLFVRTALVEMYAKTAAGEIALARA----AFDEAPRRDVFLCNVMLAAYVARGEVA 133

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A +VFD M   +L SWN+MI  Y   G V +A  +F+         D  +W+ ++S + 
Sbjct: 134 EARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDR----DAFSWSSMISAYA 189

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                +  L L R M+  G  P+  S+  VL A + +  L  G E H ++  N ++ D+ 
Sbjct: 190 KGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMK 249

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           +GT+L+DMY K   ++N+ +VF  M  ++++ W+S+I G    GL  +A  + ++M  + 
Sbjct: 250 LGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQG 309

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRES 687
           ++P+ +++  ++   +  G   +       M +  G+ P +  +  ++    +  +  E+
Sbjct: 310 LQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEA 369

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTC 713
           ++    M     KP+     +LL  C
Sbjct: 370 MELIRSMT---FKPDPIIWRTLLGAC 392



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 15/233 (6%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y   GD   A + F     R    WSS +  Y   G   +E LE+W E+   GV 
Sbjct: 152 TMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAK-GRCSKEALELWREMRVAGVA 210

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C+ + A  +G EVH  +     + D+ L  AL++ Y KC D+E++ K+
Sbjct: 211 PDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKV 270

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +  ++D L W+ +I+    +    +A+ LF EM     +    T + +L AC  VG 
Sbjct: 271 FHAMP-VKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGL 329

Query: 412 FHEGKQ-------IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            ++GK+       +HG V +      +    C++ +  R   +E A  +  SM
Sbjct: 330 VNDGKKYFSSMSDVHGVVPR------MEHYGCMVDLLGRAGHVEEAMELIRSM 376



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 1/170 (0%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           +++ Y    DV  A ++F    D  D   W+ +I    +    + A++L+REM+ +    
Sbjct: 153 MIHGYAVRGDVGMAREIFDGTRD-RDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAP 211

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              ++V +L AC+ +GA   G ++H +V  + +E ++ +   L+ MY++   +E + +VF
Sbjct: 212 DCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVF 271

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            +M   ++ +W+SMI      G    A SLF++M S  +QP+ IT+  +L
Sbjct: 272 HAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVL 321


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 249/794 (31%), Positives = 385/794 (48%), Gaps = 120/794 (15%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN +I     N      + LF  M   S    + T   + +AC ++ +   G+  H   L
Sbjct: 95   WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             +   SN+ V N L++MYSR   L  A +VFD M     S W                  
Sbjct: 155  VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM-----SVW------------------ 191

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAV 542
                        D+++WN ++  +   G  +  L +   M +  G RP+  ++  VL   
Sbjct: 192  ------------DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
              L     G++ H + + + +  +++VG  L+DMY K   +  A  VF NM  +++V+WN
Sbjct: 240  ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299

Query: 603  SLISGYCFKGLFVNAKKMLN-----------------------------------QMEEE 627
            ++++GY   G F +A ++                                     QM   
Sbjct: 300  AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359

Query: 628  EIKPDLVSWNSLVSG---------------YSIW--------GQSKEALVI--------- 655
             IKP+ V+  S++SG               Y+I         G   E +VI         
Sbjct: 360  GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419

Query: 656  ------IHHMKNSGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNST 704
                     M +S + P   +VVTWT +I G  Q+ +  ++L+   +M +ED   +PN+ 
Sbjct: 420  CKKVDTARAMFDS-LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA---YVATGLIDMYSKSGNLKSAREVF 761
            T+S  L  C  L  L+ GK+IH   L+N   ++A   +V+  LIDMY+K G++  AR VF
Sbjct: 479  TISCALVACASLAALRIGKQIHAYALRNQ--QNAVPLFVSNCLIDMYAKCGSISDARLVF 536

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                 K   +W  ++ G+ ++G G+EA+ +F E+   GF+ D +T   +L AC +SG+++
Sbjct: 537  DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G +YF+ M T + + P  EHY+C+VDLLG+AG L+ A   I  MP +P   +W A L  
Sbjct: 597  QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CRIHG +E  E A+ ++ +L   +  +Y L+ NL A + RW+DV R+R  M   GVK   
Sbjct: 657  CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SW++  +    F      HP   EIY  L   +  +K +GYVP+T     D+D+EEK 
Sbjct: 717  GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKD 776

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
             +L  H+EKLA+ YG++ T   A IR+ KN RVC DCHTA  YMS +   +I LRD +RF
Sbjct: 777  DLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRF 836

Query: 1062 HHFREGECSCNDCW 1075
            HHF+ G CSC   W
Sbjct: 837  HHFKNGSCSCKGYW 850



 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 170/674 (25%), Positives = 295/674 (43%), Gaps = 95/674 (14%)

Query: 202 NKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD- 260
           +K + +S VK  H +++  G +  + ++   LI  Y+  G  + A  +    F  S A  
Sbjct: 36  HKCKTISQVKLIHQKLLSFGIL--TLNLTSHLISTYISVGCLSHAV-SLLRRFPPSDAGV 92

Query: 261 --WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
             W+S +  Y    G   + L ++G +H       +     + K C ++ +   G   HA
Sbjct: 93  YHWNSLIRSYGD-NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
             +  GF  +V +  AL+  Y +CR +  A K+F E+S + D + WN II    +  K +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS-VWDVVSWNSIIESYAKLGKPK 210

Query: 379 NAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            A+++F  M      +  + T+V +L  CA +G    GKQ+H + + S +  N+ V NCL
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           + MY++   ++ A  VF +M   ++ SWN+M++ Y+ +G  + A  LF KM   +I+ D+
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
           +TW+  +SG+   G     L + R M S G +PN  ++  VL     +  L +G+E H Y
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390

Query: 558 IL-------RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGY 608
            +       +NG   +  V   L+DMY K   +  A+ +FD++  K R++V W  +I GY
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450

Query: 609 CFKGLFVNAKKMLNQMEEEEIK-------------------------------------- 630
              G    A ++L++M EE+ +                                      
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510

Query: 631 -PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
            P  VS N L+  Y+  G   +A ++  +M    +  N VTWTSL++G   +    E+L 
Sbjct: 511 VPLFVS-NCLIDMYAKCGSISDARLVFDNM----MAKNEVTWTSLMTGYGMHGYGEEALG 565

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            F +M++   K +  T+  +L  C   G++  G E                         
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY------------------------ 601

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
                   + VF  S       + C++      G    A+ L  E+     +P  + + A
Sbjct: 602 ----FNRMKTVFGVSPGPE--HYACLVDLLGRAGRLNAALRLIEEM---PMEPPPVVWVA 652

Query: 810 LLAACKNSGLVEEG 823
            L+ C+  G VE G
Sbjct: 653 FLSCCRIHGKVELG 666



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 164/382 (42%), Gaps = 32/382 (8%)

Query: 158 NRHSHKPNSITNSPTSLALPPTDTLAKQA---QLSCISSGFCFLNETNKFRCLSSVKSKH 214
           N    +P++IT       LPP  +L   +   QL C +     +       CL  + +K 
Sbjct: 221 NEFGCRPDNIT---LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277

Query: 215 AQMIKMGKIWNS---DDMVK--SLIFHYLEFGDFTSAAKAFFLY----FSRSYADWSSFL 265
             M +   ++++    D+V   +++  Y + G F  A + F              WS+ +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             Y    G   E L V  ++   G+      L  +L  C  + A   G E+H   IK   
Sbjct: 338 SGYAQ-RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396

Query: 326 DF-------DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKW 377
           D        +  +   L++ Y KC+ V++A  +F  +S  E D++ W  +I    ++   
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456

Query: 378 ENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES-NLSVC 434
             A++L  EM  +    +  + TI   L ACA + A   GKQIH Y L++   +  L V 
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           NCLI MY++   +  A  VFD+M   N  +W S+++ Y   GY + A  +F++M     +
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576

Query: 495 PD-----IITWNCLLSGHFTHG 511
            D     ++ + C  SG    G
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQG 598



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 130/310 (41%), Gaps = 44/310 (14%)

Query: 639 LVSGYSIWGQSKEALVIIHHM--KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
           L+S Y   G    A+ ++      ++G+Y     W SLI     N    + L  F  M  
Sbjct: 65  LISTYISVGCLSHAVSLLRRFPPSDAGVY----HWNSLIRSYGDNGCANKCLYLFGLMHS 120

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
               P++ T   + + CG +  ++ G+  H L L  GFI + +V   L+ MYS+  +L  
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQPDAITFTALLAACK 815
           AR+VF + +   + SWN +I  +A  G  K A+ +F  +  E G +PD IT   +L  C 
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240

Query: 816 NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
           + G    G K     +    +I  +   +C+VD+  K G +DEA      M  K D   W
Sbjct: 241 SLGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSW 298

Query: 876 GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
            A++          Y++I                           R+ED  RL   M E 
Sbjct: 299 NAMVAG--------YSQIG--------------------------RFEDAVRLFEKMQEE 324

Query: 936 GVK-SVLVWS 944
            +K  V+ WS
Sbjct: 325 KIKMDVVTWS 334


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
            mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/644 (35%), Positives = 349/644 (54%), Gaps = 44/644 (6%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            +  +Y  LG + VA   FN +    +     +WN +L+ H  +  + +VL L + M   G
Sbjct: 53   IFGAYIQLGSLHVASKAFNHITFENLH----SWNTILASHSKNKCFYDVLQLFKRMLKEG 108

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
               +  ++   ++A   L L +  +  H   ++  L+ D YV  +LM++Y +   L+ A 
Sbjct: 109  KLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAH 168

Query: 588  EVFDNMKNRNIVAWNSLISG--------------------------YCFKGLF-----VN 616
            +VF+ +  +N V W  +I G                          +  +GL      V 
Sbjct: 169  KVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVY 228

Query: 617  AKKMLNQMEEEEIKPDLVSWN-----SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
            A K         IK + +  N     SLV  Y   G    AL +   +     Y +VV W
Sbjct: 229  AGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEIS----YRDVVVW 284

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            +++I+G  +N    ES+  F QM  + + PNS T +S++  C  LG L+ G+ +H   ++
Sbjct: 285  SAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIR 344

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            NG   D    T  IDMY+K G + +A  VF +   K + SW+ MI GF ++G   EA+ L
Sbjct: 345  NGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNL 404

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F+E+      P+++TF ++L+AC +SG +EEGW +F SMS DY I P  EHY+CMVDLLG
Sbjct: 405  FYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLG 464

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG +DEA  FI  MP +P A+ WGALLG+CRIH   E AE  +++L  LE   S  Y +
Sbjct: 465  RAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVM 524

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ A    WE V++ R  M E G+  ++ ++ I+I++ +++FS+E        +I   
Sbjct: 525  LSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESL 584

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
               L   M++LGYVPD R V  D+D+E K +VL  H+EKLAIV+GL+ +    PIR+ KN
Sbjct: 585  WNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKN 644

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVC DCHTA+K++SL+  R+I +RD  RFHH ++G CSC D W
Sbjct: 645  MRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 215/478 (44%), Gaps = 40/478 (8%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y++ G    A+KAF      +   W++ L  + S      ++L+++  +  +G +  S  
Sbjct: 57  YIQLGSLHVASKAFNHITFENLHSWNTILASH-SKNKCFYDVLQLFKRMLKEGKLVDSFN 115

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L   +K C  L  F      H+  IK   + D ++  ALMN Y +   +E A+K+F EV 
Sbjct: 116 LVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVP 175

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
            L++ ++W  +I   L   +     +LF  M+ S  +     +  ++QAC  V A  EGK
Sbjct: 176 -LKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGK 234

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
             HG  +K                               +  D N     S++  Y   G
Sbjct: 235 TFHGLCIKK------------------------------NFIDSNFFLQTSLVDMYMKCG 264

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
           ++D A  LF +++      D++ W+ +++G   +G     +++ R M +    PN  + +
Sbjct: 265 FLDFALKLFEEISYR----DVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFA 320

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            ++ A + L  LK GR  HGY++RNG++ D+   TS +DMY K  C+  A  VF  +  +
Sbjct: 321 SIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEK 380

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+ +W+++I+G+   GL   A  +  +M      P+ V++ S++S  S  G+ +E     
Sbjct: 381 NVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHF 440

Query: 657 HHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             M ++ GI P    +  ++    +     E+L F   M  E   P ++   +LL  C
Sbjct: 441 KSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTE---PGASAWGALLGAC 495



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 5/246 (2%)

Query: 638 SLVSGYSIWGQSKE--ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
           SL+ G  I+G   +  +L +     N   + N+ +W ++++   +N+ + + L+ F +M 
Sbjct: 46  SLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRML 105

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           +E    +S  +   ++ C GL L Q  K  H L +K     D YVA  L+++Y++ G+L+
Sbjct: 106 KEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLE 165

Query: 756 SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            A +VF +   K    W  MI G   +        LF  +  +GF+ D      L+ AC 
Sbjct: 166 EAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACG 225

Query: 816 NSGLVEEGWKYFDSMSTDYNIIPT-IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
           N    +EG K F  +    N I +     + +VD+  K G+LD A      + ++ D  +
Sbjct: 226 NVYAGKEG-KTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYR-DVVV 283

Query: 875 WGALLG 880
           W A++ 
Sbjct: 284 WSAIIA 289



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 10/266 (3%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K+ H   IK   I ++  +  SL+  Y++ G    A K F     R    WS+ +  +  
Sbjct: 234 KTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFAR 293

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G   E + ++ ++    V   S     I+  C+ L +   G  VH  +I+ G + DV 
Sbjct: 294 -NGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVK 352

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
              + ++ Y KC  + +A ++F ++ + ++   W+ +I     +     A+ LF EM+  
Sbjct: 353 NYTSFIDMYAKCGCIVTAYRVFCQIPE-KNVFSWSTMINGFGMHGLCAEALNLFYEMRSV 411

Query: 391 SAKAISRTIVKMLQACAKVGAFHEG----KQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           +    S T V +L AC+  G   EG    K +      + +E + +   C++ +  R  K
Sbjct: 412 NQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYA---CMVDLLGRAGK 468

Query: 447 LELATRVFDSMK-DHNLSSWNSMISS 471
           ++ A    ++M  +   S+W +++ +
Sbjct: 469 IDEALSFINNMPTEPGASAWGALLGA 494



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 7/174 (4%)

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L +  +++   L N   +       +   Y + G+L  A + F     + L SWN ++  
Sbjct: 28  LASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILAS 87

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
            +      + + LF  +L+ G   D+      + AC    L  +G K F S++    +  
Sbjct: 88  HSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLF-QGAKLFHSLAIKLRLEG 146

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
                  ++++  + G L+EA      +P K ++ IWG +     I GHL ++E
Sbjct: 147 DPYVAPALMNVYTELGSLEEAHKVFEEVPLK-NSVIWGVM-----IKGHLNFSE 194


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/679 (32%), Positives = 348/679 (51%), Gaps = 68/679 (10%)

Query: 430  NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
            N  +CN LI +Y++ ++ + A  VF  ++  N+ SW  M++++      D  W  F    
Sbjct: 9    NRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF---- 64

Query: 490  SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                                           RGM   G  P    +S+ L A T+ R + 
Sbjct: 65   -------------------------------RGMLLQGINPGEVGISIFLSACTDAREIT 93

Query: 550  YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
             GR     IL  G++ +  V T+L+ +Y K     +A  VF  M +R++VAW+++++ Y 
Sbjct: 94   IGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYA 153

Query: 610  FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP--- 666
              G    A  +  QM+ + + P+ V+  S +   +  G  +   ++   ++  GI     
Sbjct: 154  RNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVV 213

Query: 667  ----------------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
                                        NVV W+++ +   +N+  R++++   +M  E 
Sbjct: 214  VGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 273

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIH--CLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            + PNSTT  S+L  C  +  L+ G+ IH     L  G   D YV T L++MYSK GNL  
Sbjct: 274  LAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLAL 333

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A  +F K A+  L  WN +I   A +G  ++A+ LF  +   G QP  ITFT++L AC +
Sbjct: 334  AGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSH 393

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            +G++++G K+F S   D+ I P  EH+ CMVDLLG+AG++ ++ D +  MPF+P    W 
Sbjct: 394  AGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWM 453

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            A LG+CR + +++ A  A+  LF+L+P   A Y L+ N+ A + RW DV R+R +M    
Sbjct: 454  AFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFM 513

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
                   SWI++   VH F +    HP  GEI+ EL  L   MK  GYVPDT  V  D+ 
Sbjct: 514  TVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVK 573

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            +E K  ++  H+EKLA+ + L+ T   +PIRV+KN RVC+DCHTA+K++S +  REI +R
Sbjct: 574  QEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVR 633

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFH F+ G CSC D W
Sbjct: 634  DCNRFHRFQNGACSCGDYW 652



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 190/440 (43%), Gaps = 46/440 (10%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG---KG 289
           LI  Y +   F  A   F    S++   W+  L  +     E ++    W    G   +G
Sbjct: 16  LIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAF----AENRDFDRCWLFFRGMLLQG 71

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
           +      ++I L  CT      +G  +  +++  G + +  ++ AL++ YGK      A 
Sbjct: 72  INPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAA 131

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            +F  +S   D + W+ ++    RN     A+ LFR+M          T+V  L ACA +
Sbjct: 132 SVFLRMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 190

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G    G  +H  V    ++S + V   L+++Y +  ++E A   F  + + N+ +W+++ 
Sbjct: 191 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAIS 250

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           ++Y             N  N                        ++ + +L  M   G  
Sbjct: 251 AAYAR-----------NDRN------------------------RDAIRVLHRMDLEGLA 275

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHG--YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
           PN ++   VL A   +  LK GR  H   ++L  GL+ D+YV T+L++MY K   L  A 
Sbjct: 276 PNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAG 335

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            +FD + + ++V WNSLI+     G    A ++  +M  E ++P ++++ S++   S  G
Sbjct: 336 NMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAG 395

Query: 648 QSKEALV-IIHHMKNSGIYP 666
              +     +  + + GI+P
Sbjct: 396 MLDQGRKHFVSFIGDHGIFP 415



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 12/160 (7%)

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
           G+I++ ++   LID+Y+K      A  VF    +K + SW  M+  FA   +     L F
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT-IEHYS----CMV 847
             +L  G  P  +  +  L+AC ++  +  G       S    I+ T IE  S     +V
Sbjct: 65  RGMLLQGINPGEVGISIFLSACTDAREITIG------RSIQLAILGTGIEEESIVQTALV 118

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            L GK G+  +A      M  + D   W A++ +   +GH
Sbjct: 119 SLYGKLGHCTDAASVFLRMSHR-DVVAWSAMVAAYARNGH 157


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 721

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 242/715 (33%), Positives = 382/715 (53%), Gaps = 49/715 (6%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L++ A+   F  GK +H   +KS + S+  + N  +++YS+   L  A   FDS ++ N
Sbjct: 15   LLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPN 73

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            + S+N ++ +Y     + +A  LF++      QPD +++N L+SG+         + L +
Sbjct: 74   VFSYNVIVKAYAKDSKIHIARQLFDE----NPQPDTVSYNTLISGYADARETVAAMVLFK 129

Query: 522  GMQSLGFRPNGSSVSVVLQAVTE-LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M+ LGF  +G ++S ++ A  + + L+K   + H + +  G D    V  + +  Y K 
Sbjct: 130  RMRELGFEVDGFTLSGLIAACCDRVDLIK---QLHCFAVSGGFDSYSSVNNAFVTYYSKG 186

Query: 581  DCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------- 632
              L+ A  VF  M   R+ V+WNS+I  Y        A  +  +M  +  K D       
Sbjct: 187  GLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246

Query: 633  ---LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY------------------------ 665
               L S + L+ G    G+  +A    +    SG+                         
Sbjct: 247  LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS 306

Query: 666  PNVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
            P++V W ++ISG S+  E+  E++K F QMQ+   +P+  +   +   C  L     GK+
Sbjct: 307  PDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQ 366

Query: 725  IHCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            IH L +K+    +   V   LI +Y KSGNL  AR VF +       S+NCMI G+A +G
Sbjct: 367  IHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHG 426

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            +G EA+ L+  +L++G  P+ ITF A+L+AC + G V+EG KYF++M   + I P  EHY
Sbjct: 427  HGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY 486

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            SCM+DLLG+AG L+EA  FI  MP+KP +  W ALLG+CR H ++  AE A++ L  ++P
Sbjct: 487  SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQP 546

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
              +  Y ++ N+ A + +WE++  +R SM    ++     SWI++ +  HVF AE   HP
Sbjct: 547  LAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS---HTEKLAIVYGLMKT 1020
               E+   L  ++ +MKK+GYV D +      DE  +G+  +    H+EKLA+ +GLM T
Sbjct: 607  MIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMST 666

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +    I V+KN R+C DCH A K+MS V GREI +RD  RFH F++G+CSC D W
Sbjct: 667  RDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 140/291 (48%), Gaps = 27/291 (9%)

Query: 240 FGDFTSAAKAFFLYFS------------------RSYADWSSFLEDYESFGGEVQELLEV 281
           F  ++S   AF  Y+S                  R    W+S +  Y     E  + L +
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHK-EGAKALAL 227

Query: 282 WGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
           + E+  KG       L  +L   T L     G + H  LIK GF  + H+   L++FY K
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287

Query: 342 C--RD-VESANKLFSEVSDLEDDL-LWNEIIM-VKLRNEKWENAIKLFREMQFSSAKAIS 396
           C  RD +  + K+F E+  L  DL LWN +I    +  E  E A+K FR+MQ    +   
Sbjct: 288 CGGRDGMSDSEKVFQEI--LSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDD 345

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN-LSVCNCLISMYSRNNKLELATRVFD 455
            + V +  AC+ + +  +GKQIHG  +KS + SN +SV N LIS+Y ++  L  A RVFD
Sbjct: 346 CSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFD 405

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            M + N  S+N MI  Y   G+   A  L+ +M  S I P+ IT+  +LS 
Sbjct: 406 RMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSA 456



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 180/404 (44%), Gaps = 42/404 (10%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H   +  GFD    +  A + +Y K   +  A  +F  +  L D++ WN +I+   ++
Sbjct: 159 QLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQH 218

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           ++   A+ L++EM F   K    T+  +L A   +     G+Q HG ++K+    N  V 
Sbjct: 219 KEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG 278

Query: 435 NCLISMYSR---NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           + LI  YS+    + +  + +VF  +   +L  WN+MIS Y+              MN  
Sbjct: 279 SGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYS--------------MNEE 324

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
             +  + ++                    R MQ +G RP+  S   V  A + L     G
Sbjct: 325 HSEEAVKSF--------------------RQMQRIGHRPDDCSFVCVTSACSNLSSPSQG 364

Query: 552 RESHGYILRNGLDYD-LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           ++ HG  +++ +  + + V  +L+ +Y K+  L +A+ VFD M   N V++N +I GY  
Sbjct: 365 KQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQ 424

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVV 669
            G    A ++  +M +  I P+ +++ +++S  +  G+  E     + MK +  I P   
Sbjct: 425 HGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAE 484

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            ++ +I    +     E+ +F   M     KP S   ++LL  C
Sbjct: 485 HYSCMIDLLGRAGKLEEAERFIDAMP---YKPGSVAWAALLGAC 525


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
            At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 251/808 (31%), Positives = 408/808 (50%), Gaps = 88/808 (10%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            ++  ++ K G   D+ +   L++ + K   +  A K+F+++ +  + +  N + MV L  
Sbjct: 229  QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGL-MVGLVR 286

Query: 375  EKW-ENAIKLFREMQFSSAKAISRTIVKMLQA-----CAKVGAFHEGKQIHGYVLKSAL- 427
            +KW E A KLF +M  S       + V +L +      A+     +G+++HG+V+ + L 
Sbjct: 287  QKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            +  + + N L++MY++   +  A RVF  M D                            
Sbjct: 346  DFMVGIGNGLVNMYAKCGSIADARRVFYFMTD---------------------------- 377

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
                    D ++WN +++G   +G +   +   + M+     P   ++   L +   L+ 
Sbjct: 378  -------KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
             K G++ HG  L+ G+D ++ V  +LM +Y +   L   +++F +M   + V+WNS+I  
Sbjct: 431  AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490

Query: 608  YCFKG--------LFVNAKKM---LNQME-------------------------EEEIKP 631
                          F+NA++    LN++                          +  I  
Sbjct: 491  LARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIAD 550

Query: 632  DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
            +  + N+L++ Y   G+      I   M       + VTW S+ISG + NE   ++L   
Sbjct: 551  EATTENALIACYGKCGEMDGCEKIFSRMAER---RDNVTWNSMISGYIHNELLAKALDLV 607

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
              M Q   + +S   +++L     +  L+ G E+H   ++     D  V + L+DMYSK 
Sbjct: 608  WFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKC 667

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL-LETGFQPDAITFTAL 810
            G L  A   F     +   SWN MI G+A +G G+EA+ LF  + L+    PD +TF  +
Sbjct: 668  GRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGV 727

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L+AC ++GL+EEG+K+F+SMS  Y + P IEH+SCM D+LG+AG LD+  DFI  MP KP
Sbjct: 728  LSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKP 787

Query: 871  DATIWGALLGS-CRIHGH-LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            +  IW  +LG+ CR +G   E  + A+  LF+LEP N+ NY L+ N+ A   RWED+ + 
Sbjct: 788  NVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKA 847

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R  M +  VK    +SW+ +   VH+F A    HP    IY +L  L  +M+  GYVP T
Sbjct: 848  RKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQT 907

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA-PIRVIKNTRVCSDCHTAAKYMSL 1047
                 D+++E K ++L  H+EKLA+ + L   +S   PIR++KN RVC DCH+A KY+S 
Sbjct: 908  GFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISK 967

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            + GR+I LRD  RFHHF++G CSC+D W
Sbjct: 968  IEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 178/708 (25%), Positives = 307/708 (43%), Gaps = 86/708 (12%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  +LI  YLE GD  SA K F     R+   W+  +  Y S  GE +E L    ++  +
Sbjct: 38  LCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY-SRNGEHKEALVFLRDMVKE 96

Query: 289 GVIFRSRILTIILKLCTKL--MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           G+         +L+ C ++  +    G ++H  + K  +  D  +   L++ Y KC  + 
Sbjct: 97  GIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC--IG 154

Query: 347 SANKLFSEVSDLE--DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML- 403
           S         D+E  + + WN II V  +     +A ++F  MQ+  ++    T   ++ 
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214

Query: 404 QACAKVGA-FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            AC+         +QI   + KS L ++L V + L+S ++++  L  A +VF+ M+  N 
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSS-RIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            + N ++       + + A  LF  MNS   + P+               SY  +L+   
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE---------------SYVILLS--- 316

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL-DYDLYVGTSLMDMYVKN 580
                         S    ++ E   LK GRE HG+++  GL D+ + +G  L++MY K 
Sbjct: 317 --------------SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP---DLVS-- 635
             + +A+ VF  M +++ V+WNS+I+G    G F+ A +    M   +I P    L+S  
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422

Query: 636 -------W-----------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
                  W                       N+L++ Y+  G   E   I   M      
Sbjct: 423 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH--- 479

Query: 666 PNVVTWTSLISGSLQNE-NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
            + V+W S+I    ++E +  E++  F+  Q+   K N  T SS+L     L   + GK+
Sbjct: 480 -DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYG 783
           IH L LKN    +A     LI  Y K G +    ++F R +  +   +WN MI G+    
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
              +A+ L   +L+TG + D+  +  +L+A  +   +E G +   + S    +   +   
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVG 657

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           S +VD+  K G LD A  F  TMP + ++  W +++     HG  E A
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEA 704



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 159/616 (25%), Positives = 269/616 (43%), Gaps = 84/616 (13%)

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H+ L K   D DV+L   L+N Y +  D  SA K+F E+  L + + W  I+    RN +
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP-LRNCVSWACIVSGYSRNGE 82

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE--GKQIHGYVLKSALESNLSVC 434
            + A+   R+M      +     V +L+AC ++G+     G+QIHG + K +   +  V 
Sbjct: 83  HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142

Query: 435 NCLISMYSRN-NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
           N LISMY +    +  A   F  ++  N  SWNS+IS Y+  G    A+ +F+ M     
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           +P   T+  L++                              +       ++RLL+   +
Sbjct: 203 RPTEYTFGSLVT------------------------------TACSLTEPDVRLLE---Q 229

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK-- 611
               I ++GL  DL+VG+ L+  + K+  L  A++VF+ M+ RN V  N L+ G   +  
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289

Query: 612 -----GLFVNAKKMLNQMEE---------------EE-------------IKPDLVSW-- 636
                 LF++   M++   E               EE             I   LV +  
Sbjct: 290 GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349

Query: 637 ---NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
              N LV+ Y+  G   +A  + + M +     + V+W S+I+G  QN  + E+++ +  
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTD----KDSVSWNSMITGLDQNGCFIEAVERYKS 405

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M++ DI P S T+ S L +C  L   + G++IH   LK G   +  V+  L+ +Y+++G 
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNG-KEAILLFHELLETGFQPDAITFTALLA 812
           L   R++F         SWN +I   A       EA++ F      G + + ITF+++L+
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
           A  +    E G K    ++   NI       + ++   GK G +D        M  + D 
Sbjct: 526 AVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584

Query: 873 TIWGALLGSCRIHGHL 888
             W +++ S  IH  L
Sbjct: 585 VTWNSMI-SGYIHNEL 599



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 217/505 (42%), Gaps = 46/505 (9%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H  +I  G +     +   L+  Y + G    A + F+    +    W+S +   +  G 
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
            + E +E +  +    ++  S  L   L  C  L    LG ++H   +K G D +V +  
Sbjct: 396 FI-EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK-WENAIKLFREMQFSSA 392
           ALM  Y +   +    K+FS + +  D + WN II    R+E+    A+  F   Q +  
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPE-HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ 513

Query: 393 KAISRTIVKMLQACAKVGAFHE-GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
           K ++R     + +     +F E GKQIHG  LK+ +    +  N LI+ Y +  +++   
Sbjct: 514 K-LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572

Query: 452 RVFDSMKDHNLS-SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           ++F  M +   + +WNSMIS Y                    I  +++            
Sbjct: 573 KIFSRMAERRDNVTWNSMISGY--------------------IHNELLA----------- 601

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                 L L+  M   G R +    + VL A   +  L+ G E H   +R  L+ D+ VG
Sbjct: 602 ----KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME-EEEI 629
           ++L+DMY K   L  A   F+ M  RN  +WNS+ISGY   G    A K+   M+ + + 
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
            PD V++  ++S  S  G  +E       M +S G+ P +  + S ++  L      + L
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF-SCMADVLGRAGELDKL 776

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
           + FI  ++  +KPN     ++L  C
Sbjct: 777 EDFI--EKMPMKPNVLIWRTVLGAC 799



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 124/533 (23%), Positives = 215/533 (40%), Gaps = 100/533 (18%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           +  +Q+C  VG     +  H  + K+ L+ ++ +CN LI+ Y        A +VFD M  
Sbjct: 7   LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            N  SW                                    C++SG+  +G ++  L  
Sbjct: 65  RNCVSW-----------------------------------ACIVSGYSRNGEHKEALVF 89

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLK--YGRESHGYILRNGLDYDLYVGTSLMDMY 577
           LR M   G   N  +   VL+A  E+  +   +GR+ HG + +     D  V   L+ MY
Sbjct: 90  LRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149

Query: 578 VKNDCLQN---AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--- 631
            K  C+ +   A   F +++ +N V+WNS+IS Y   G   +A ++ + M+ +  +P   
Sbjct: 150 WK--CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEY 207

Query: 632 ----------------------------------DLVSWNSLVSGYSIWGQSKEALVIIH 657
                                             DL   + LVS ++  G    A  + +
Sbjct: 208 TFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTM-------SSL 709
            M+      N VT   L+ G ++ +   E+ K F+ M    D+ P S  +        SL
Sbjct: 268 QMETR----NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKT 768
            +  G    L+ G+E+H   +  G +     +  GL++MY+K G++  AR VF    +K 
Sbjct: 324 AEEVG----LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
             SWN MI G    G   EA+  +  +      P + T  + L++C +    + G +   
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG-QQIH 438

Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
             S    I   +   + ++ L  + GYL+E      +MP + D   W +++G+
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 22/396 (5%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG ++H   +K     +   + AL+  YGKC +++   K+FS +++  D++ WN +I   
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           + NE    A+ L   M  +  +  S     +L A A V     G ++H   +++ LES++
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-S 490
            V + L+ MYS+  +L+ A R F++M   N  SWNSMIS Y   G  + A  LF  M   
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRP---NGSSVSVVLQAVTELR 546
            +  PD +T+  +LS     G  +        M  S G  P   + S ++ VL    EL 
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L+   E    +  N L +   +G        K +  + A E+   ++  N V +  L +
Sbjct: 775 KLEDFIEKMP-MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDL-VSWNSLVSGYSIW----GQSKEALVII----- 656
            Y   G + +  K   +M++ ++K +   SW ++  G  ++        +A VI      
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE 893

Query: 657 --HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
               M+++G  P     T      L+ EN  E L +
Sbjct: 894 LNRKMRDAGYVPQ----TGFALYDLEQENKEEILSY 925


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/727 (31%), Positives = 372/727 (51%), Gaps = 93/727 (12%)

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
            +  ++ AC K+ A  EG+++H +++ +   +++ +   L+ MY++   L+ A RVF+ M+
Sbjct: 13   VTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGME 72

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
                                                 D+  W+ ++S +   G  +  + 
Sbjct: 73   -----------------------------------IKDLFAWSSIISAYARAGRGEMAVV 97

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
            L R M + G  PN  + +  L     +  L  GR  H  IL + +  D  +  SL++MY+
Sbjct: 98   LYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYL 157

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE-EEIKPD----- 632
            K D +  A++VF+ MK RN+ ++ ++IS Y   G    A ++ ++M + E I+P+     
Sbjct: 158  KCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFA 217

Query: 633  ------------------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                                          +V  N+LV+ Y   G   EA  +   M   
Sbjct: 218  TILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR 277

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                NV++WTS+I+   Q+ N +E+L  F +M   D++P+  + SS L  C  LG L  G
Sbjct: 278  ----NVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEG 330

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            +EIH   ++   +    + T L+ MY++ G+L  AR VF +   +   S N MI  F  +
Sbjct: 331  REIHHRVVE-AHLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQH 389

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G  K+A+ ++  + + G   D ITF ++L AC ++ LV +   +F S+  D+ ++P +EH
Sbjct: 390  GRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEH 449

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            Y CMVD+LG++G L +A + + TMP++ DA  W  LL  C+ HG L   E A+R++F+L 
Sbjct: 450  YLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELA 509

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P  +  Y  + N+ A + R++D  R+R  M+E GV + +  S+I+ID  +H+F++ G   
Sbjct: 510  PAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDE 569

Query: 963  PATG-------EIYFELYHLVSEMKKLGYVPDTRCVYQD----IDEEEKGKVLLSHTEKL 1011
               G        +   L  L+  MK+ GYVPDTR VY +      EEEK + L  H+E+L
Sbjct: 570  QQEGHDGRTMERVRSLLLELLEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERL 629

Query: 1012 AIVYGLMKTK---SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            AI YGL+  K      P+RV+ + RVCSDCH+A K +S +  + IF+RDG RFHHF +G 
Sbjct: 630  AIAYGLIAAKDPDDSRPLRVVNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGA 689

Query: 1069 CSCNDCW 1075
            CSC D W
Sbjct: 690  CSCGDHW 696



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 245/529 (46%), Gaps = 70/529 (13%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +G++    I+T ++  CTKL A   G  +H  LI  GF  D+ L+ AL+  Y KC  ++ 
Sbjct: 4   RGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDD 63

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A ++F E  +++D   W+ II    R  + E A+ L+R M     +    T    L  CA
Sbjct: 64  AKRVF-EGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCA 122

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            V    +G+ IH  +L S +  +  + + L++MY + +++  A +VF+ MK  N+ S+ +
Sbjct: 123 SVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTA 182

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           MIS+Y   G    A  LF++M  S+++                                 
Sbjct: 183 MISAYVQAGEHAEALELFSRM--SKVE--------------------------------A 208

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             PN  + + +L AV  L  L+ GR+ H ++   G D ++ V  +L+ MY K      A+
Sbjct: 209 IEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEAR 268

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
           +VFD+M  RN+++W S+I+ Y   G   N ++ LN  +  +++P  VS++S ++  ++ G
Sbjct: 269 KVFDSMTARNVISWTSMIAAYAQHG---NPQEALNLFKRMDVEPSGVSFSSALNACALLG 325

Query: 648 QSKEALVIIH-----HMKNSGIYPNVVTW-------------------------TSLISG 677
              E   I H     H+ +  +  ++++                           ++I+ 
Sbjct: 326 ALDEGREIHHRVVEAHLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAA 385

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIK 736
             Q+   +++L+ + +M+QE I  +  T  S+L  C    L+ + ++    L + +G + 
Sbjct: 386 FTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVP 445

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-SWNCMIMGFAIYGN 784
                  ++D+  +SG L  A E+      +T A +W  ++ G   +G+
Sbjct: 446 LVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGD 494



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 199/412 (48%), Gaps = 46/412 (11%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M+  G   +   V+ ++ A T+L+ L+ GR  H +++  G   D+ + T+L+ MY K   
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------ 636
           L +A+ VF+ M+ +++ AW+S+IS Y   G    A  +  +M  E ++P++V++      
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 637 -----------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                        +SL++ Y    +  EA  +   MK      N
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKAR----N 176

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           V ++T++IS  +Q   + E+L+ F +M + E I+PN+ T +++L    GLG L+ G+++H
Sbjct: 177 VRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVH 236

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
                 GF  +  V   L+ MY K G+   AR+VF     + + SW  MI  +A +GN +
Sbjct: 237 RHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQ 296

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
           EA+ LF  +     +P  ++F++ L AC   G ++EG +    +   +   P +E  + +
Sbjct: 297 EALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSL 351

Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
           + +  + G LD+A      M  + DA    A++ +   HG  + A    RR+
Sbjct: 352 LSMYARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQHGRKKQALRIYRRM 402



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 146/310 (47%), Gaps = 8/310 (2%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
           C L        L+  ++ H Q I   K+   D +  SL+  YL+  +   A K F    +
Sbjct: 116 CALGGCASVAGLADGRAIH-QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKA 174

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHG-KGVIFRSRILTIILKLCTKLMAFWLGV 314
           R+   +++ +  Y    GE  E LE++  +   + +   +     IL     L     G 
Sbjct: 175 RNVRSYTAMISAYVQ-AGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGR 233

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           +VH  L  RGFD +V ++ AL+  YGKC     A K+F  ++   + + W  +I    ++
Sbjct: 234 KVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMT-ARNVISWTSMIAAYAQH 292

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              + A+ LF+ M    +     +    L ACA +GA  EG++IH  V+++ L S   + 
Sbjct: 293 GNPQEALNLFKRMDVEPSGV---SFSSALNACALLGALDEGREIHHRVVEAHLASP-QME 348

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+SMY+R   L+ A RVF+ MK  +  S N+MI+++T  G    A  ++ +M    I 
Sbjct: 349 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIP 408

Query: 495 PDIITWNCLL 504
            D IT+  +L
Sbjct: 409 ADGITFVSVL 418


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
            [Brassica oleracea]
          Length = 968

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 278/906 (30%), Positives = 442/906 (48%), Gaps = 85/906 (9%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            H  + +  ++ N D +   +I  Y   G    +   F     ++   W++ +  Y S   
Sbjct: 104  HQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSY-SRNE 162

Query: 274  EVQELLEVWGELHGK-GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
                +LE++ ++  + G++  +     ++K C  +    +G+ VH  ++K     DV + 
Sbjct: 163  LYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVS 222

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ---- 388
             AL++FYG    V  A ++F  + +  + + WN +I V   N   E    L  +M     
Sbjct: 223  NALVSFYGTNGSVSDALRVFKIMPE-RNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDD 281

Query: 389  ---FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
               F+   A   T+  +L  CA+      GK +HG  +K +L+  + V N L+ MYS+  
Sbjct: 282  EIAFTPDVA---TLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSK-- 336

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
                                          G ++ A  +F K+N+++   ++++WN ++ 
Sbjct: 337  -----------------------------CGCINDAQVIF-KLNNNK---NVVSWNTMVG 363

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT---ELRLLKYGRESHGYILRNG 562
            G    G       LLR M + G       V++ L AV    E  +L   +E H Y L+  
Sbjct: 364  GFSAAGDIHKTFDLLRQMLAGGGDLRADEVTI-LNAVPVCFEESVLPNLKELHCYSLKQE 422

Query: 563  LDYD-LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
              ++   V  + +  Y K   L  A  VF +++++ + +WN+LI GY        +    
Sbjct: 423  FVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAY 482

Query: 622  NQMEEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHM-KNSGIY---------- 665
             QM+   + PDL +  SL+S  S       G+    L+I + + ++S +Y          
Sbjct: 483  FQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHC 542

Query: 666  ---------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
                             +V+W ++++G LQN     +L  F QM    ++P   +M S+ 
Sbjct: 543  GELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVF 602

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              C  L  L+ G+E H   LK     +A++A  +IDMY+K+G++  + +VF     +++A
Sbjct: 603  GACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVA 662

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            SWN M+MG+ I+G  KEAI LF E+  TG  PD +TF  +L AC +SGLV EG  Y D M
Sbjct: 663  SWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQM 722

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF-IRTMPFKPDATIWGALLGSCRIHGHLE 889
             T + + PT++HY+C++D+L +AG LDEA       M  +P   IW  LL SCRIH +LE
Sbjct: 723  KTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLE 782

Query: 890  YAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQID 949
              E  + +LF  EP    NY L+ NL A S +W++V ++R  M E+ ++     SWI+++
Sbjct: 783  MGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELN 842

Query: 950  QIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTE 1009
              V  F A  +      EI      L  E+ K+GY PDT  V  D+ EEEK + L  H+E
Sbjct: 843  GKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSE 902

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            KLAI YGL++T     +RV KN R+C DCH AAK +S V  REI +RD  RFHHF+ G C
Sbjct: 903  KLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFC 962

Query: 1070 SCNDCW 1075
            SC D W
Sbjct: 963  SCGDYW 968



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 164/325 (50%), Gaps = 3/325 (0%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L ++K  H   +K   + N++ +  + +  Y + G  + A + F    S++   W++ + 
Sbjct: 408 LPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIG 467

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y S   + +  L+ + ++   G++     +  +L  C+++ +  LG EVH  +I+   +
Sbjct: 468 GY-SQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLE 526

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D  +  +L++ Y  C ++ +A+ LF  + D +  + WN ++   L+N   E A+ LFR+
Sbjct: 527 RDSFVYISLLSLYIHCGELSTAHVLFDAMED-KTLVSWNTMVNGYLQNGFPERALSLFRQ 585

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M     +    +++ +  AC+ + +   G++ HGY LK  LE N  +   +I MY++N  
Sbjct: 586 MVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGS 645

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +  + +VF+ +K+ +++SWN+M+  Y   G    A  LF +M  +   PD +T+  +L+ 
Sbjct: 646 VMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTA 705

Query: 507 HFTHGSYQNVLTLLRGMQSL-GFRP 530
               G     LT L  M++L G  P
Sbjct: 706 CNHSGLVHEGLTYLDQMKTLFGMNP 730


>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/505 (40%), Positives = 303/505 (60%), Gaps = 9/505 (1%)

Query: 564  DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
            D D+    +++D YVK   + + + VFD M  R++++WN++I+GY   G    AK++ ++
Sbjct: 63   DRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDE 122

Query: 624  MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            M E     +LVSWNS++SG+   G  +EA  +   M       +VV+W S+++   Q   
Sbjct: 123  MPER----NLVSWNSMLSGFVKCGNVEEAFGLFSEMPCR----DVVSWNSMLACYAQCGK 174

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              E+L  F QM+   +KP   T+ SLL  C  LG L  G  +H     N    ++ V T 
Sbjct: 175  PNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTA 234

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            L+DMY+K G +  A +VF    +K + +WN +I G AI+G+ KEA  LF E+ E   +P+
Sbjct: 235  LVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPN 294

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             ITF A+L+AC ++G+V+EG K  D MS+ Y I P +EHY C++DLL +AG L+EA + I
Sbjct: 295  DITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELI 354

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
             TMP +P+ +  GALLG CRIHG+ E  E+  +RL  L+PC+S  Y L+ N+ A + +W+
Sbjct: 355  GTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWD 414

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK-L 982
            D  ++R+ M   G+  V   S I++  +VH F A    HP + +IY +L  + + +K  +
Sbjct: 415  DARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAI 474

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GY  DT  V  D++EE+K   L  H+EKLAI YGL+   S+  IR++KN RVC DCH   
Sbjct: 475  GYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVT 534

Query: 1043 KYMSLVRGREIFLRDGARFHHFREG 1067
            K +S V GREI +RD  RFHHF +G
Sbjct: 535  KLISKVYGREIIVRDRNRFHHFEDG 559



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 205/415 (49%), Gaps = 48/415 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ++K C +    W G+ VH  ++K GF+ D ++  +L++ Y   +D+ +A +LFS  SD  
Sbjct: 6   VIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSD-R 64

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + WN +I   ++  +  +   +F  M       + R ++                   
Sbjct: 65  DVVSWNAMIDGYVKRGEMGHTRMVFDRM-------VCRDVISW----------------- 100

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
                          N +I+ Y+   K++ A R+FD M + NL SWNSM+S +   G V+
Sbjct: 101 ---------------NTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVE 145

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A+ LF++M       D+++WN +L+ +   G     L L   M+++G +P  ++V  +L
Sbjct: 146 EAFGLFSEMPCR----DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 201

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A   L  L  G   H YI  N ++ +  VGT+L+DMY K   +  A +VF+ M++++++
Sbjct: 202 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 261

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           AWN++I+G    G    A+++  +M+E  ++P+ +++ +++S  S  G   E   ++  M
Sbjct: 262 AWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 321

Query: 660 KNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +S GI P V  +  +I    +     E+++    M  E   PN + + +LL  C
Sbjct: 322 SSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPME---PNPSALGALLGGC 373



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 160/345 (46%), Gaps = 20/345 (5%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H  ++K G   +S  +V SLI  Y    D  +A + F L   R    W++ ++ Y     
Sbjct: 23  HTHVVKSGFECDSY-IVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVK--- 78

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
                    GE+    ++F   +   ++   T +  + +  ++  +  KR FD       
Sbjct: 79  --------RGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEA--KRLFDEMPERNL 128

Query: 334 ----ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
               ++++ + KC +VE A  LFSE+    D + WN ++    +  K   A+ LF +M+ 
Sbjct: 129 VSWNSMLSGFVKCGNVEEAFGLFSEMP-CRDVVSWNSMLACYAQCGKPNEALALFDQMRA 187

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              K    T+V +L ACA +GA  +G  +H Y+  + +E N  V   L+ MY++  K+ L
Sbjct: 188 VGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISL 247

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           AT+VF++M+  ++ +WN++I+     G+V  A  LF +M  + ++P+ IT+  +LS    
Sbjct: 248 ATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSH 307

Query: 510 HGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            G       LL  M  S G  P       V+  +    LL+   E
Sbjct: 308 AGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAME 352



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 10/176 (5%)

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T   +++ C    +   G  +H   +K+GF  D+Y+   LI +Y+   +L +A+++F   
Sbjct: 2   TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
           +++ + SWN MI G+   G      ++F  ++      D I++  ++      G ++E  
Sbjct: 62  SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCR----DVISWNTIINGYAIVGKIDEAK 117

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           + FD M  + N++     ++ M+    K G ++EA+     MP + D   W ++L 
Sbjct: 118 RLFDEM-PERNLV----SWNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSMLA 167


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa
            Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/636 (35%), Positives = 346/636 (54%), Gaps = 39/636 (6%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            Y  L  VD A  +F+ + S    PD + WN LL+G    GS + V +  R +     RP+
Sbjct: 159  YFVLSRVDHARKVFDTVPS----PDTVLWNTLLAG--LSGS-EAVESFARMVCDGSVRPD 211

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             ++++ VL A  E+  +  GR  H +  + GL    +V T L+ +Y K   +++A+ +FD
Sbjct: 212  ATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFD 271

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
             M+  ++VA+N+LISGY   G+  ++  +  ++    + P+  +  +L+  +S +G    
Sbjct: 272  MMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLL 331

Query: 652  ALVIIHHMKNSGIYPN-------------------------------VVTWTSLISGSLQ 680
            A  +   +  SG   N                               + +W ++ISG  Q
Sbjct: 332  AQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQ 391

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            N     ++  F QM + +++PN  T+SS L  C  LG L  GK +H +  +     + YV
Sbjct: 392  NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYV 451

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             T LIDMY+K G++  AR +F    NK + SWN MI G+ ++G G EA+ L+ ++L+   
Sbjct: 452  MTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHL 511

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
             P + TF ++L AC + GLVEEGWK F SM+ DY I P IEH +CMVDLLG+AG L EA+
Sbjct: 512  LPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAF 571

Query: 861  DFIRTMPFKP-DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
            + I   P       +WGALLG+C +H   + A++AS++LF+L+P NS  Y L+ NL    
Sbjct: 572  ELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSK 631

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
             ++ +   +R       +     ++ I+I    HVF A    HP +  IY  L  L ++M
Sbjct: 632  KQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKM 691

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
             + GY P+T     D++EEEK  ++  H+EKLAI +GL+ T+    IR+IKN RVC DCH
Sbjct: 692  IEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCH 751

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             A K++S V  R I +RD +RFHHFR+G CSC D W
Sbjct: 752  NATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 188/418 (44%), Gaps = 39/418 (9%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +L    ++    +G  VH+   K G     H+   L++ Y KC DVESA  LF ++ 
Sbjct: 215 LASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLF-DMM 273

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D + +N +I     N    +++ LF E+        S T+V ++   +  G     +
Sbjct: 274 EKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQ 333

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +HG+VLKS   +N  V   + +++ R N +E A + FD+M +  + SWN+MIS Y   G
Sbjct: 334 CLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNG 393

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             ++A +LF +M    ++P+ IT                                   +S
Sbjct: 394 LTEMAVALFEQMVKLNVRPNPIT-----------------------------------IS 418

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             L A  +L  L  G+  H  I    L+ ++YV T+L+DMY K   +  A+ +F+ M N+
Sbjct: 419 STLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNK 478

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+V+WN++I+GY   G    A K+   M +  + P   ++ S++   S  G  +E   + 
Sbjct: 479 NVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVF 538

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             M +   I P +   T ++    +    +E+ +   +  +  + P      +LL  C
Sbjct: 539 RSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--VWGALLGAC 594



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 6/280 (2%)

Query: 227 DDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELH 286
           + ++  LI  Y + GD  SA   F +        +++ +  Y S  G V   + ++ EL 
Sbjct: 247 EHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGY-SVNGMVGSSVNLFTELM 305

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
             G+   S  L  ++ + +      L   +H  ++K GF  +  +  A+   + +  D+E
Sbjct: 306 TLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDME 365

Query: 347 SANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           SA K F  + +  +E    WN +I    +N   E A+ LF +M   + +    TI   L 
Sbjct: 366 SARKAFDTMPEKTMES---WNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLS 422

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           ACA++GA   GK +H  + +  LE N+ V   LI MY++   +  A R+F++M + N+ S
Sbjct: 423 ACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVS 482

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           WN+MI+ Y   G    A  L+  M  + + P   T+  +L
Sbjct: 483 WNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVL 522



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 7/151 (4%)

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
           D +VA+ L  +Y     +  AR+VF    +     WN ++ G     +G EA+  F  ++
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL----SGSEAVESFARMV 203

Query: 797 ETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
             G  +PDA T  ++L A      V  G +   S +    +       + ++ L  K G 
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMG-RCVHSFAEKCGLAEHEHVLTGLISLYSKCGD 262

Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           ++ A      M  KPD   + AL+    ++G
Sbjct: 263 VESARCLFDMME-KPDLVAYNALISGYSVNG 292


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 771

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/674 (34%), Positives = 358/674 (53%), Gaps = 40/674 (5%)

Query: 437  LISMYSRNNKLELATRVFDSMKDHN----LSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            L++  ++   L+ AT++   +   N    L++ N+++  Y   G +     LFN      
Sbjct: 103  LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTY--PH 160

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
               +++TW  L++           LT    M++ G  PN  + S +L A     LL  G+
Sbjct: 161  PSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQ 220

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H  I ++    D +V T+L+DMY K   +  A+ VFD M +RN+V+WNS+I G+    
Sbjct: 221  QIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNK 280

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQ-SKEALVIIHHMKN 661
            L+  A  +    E   + PD VS +S++S          G  + G   K  LV + ++KN
Sbjct: 281  LYGRAIGVFR--EVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKN 338

Query: 662  S--------GIYPN------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S        G++ +            VVTW  +I G  +  N+ ++  +F  M +E ++P
Sbjct: 339  SLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEP 398

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +  + SSL      +  L  G  IH   LK G +K++ +++ L+ MY K G++  A +VF
Sbjct: 399  DEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVF 458

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            R++    +  W  MI  F  +G   EAI LF E+L  G  P+ ITF ++L+AC ++G ++
Sbjct: 459  RETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKID 518

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G+KYF+SM+  +NI P +EHY+CMVDLLG+ G L+EA  FI +MPF+PD+ +WGALLG+
Sbjct: 519  DGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGA 578

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C  H ++E     + RLFKLEP N  NY L+ N+       E+ + +R  M   GV+   
Sbjct: 579  CGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKES 638

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SWI +     VF+A    H  T EIY  L  L   +K+ GYV +T+     ++  E+ 
Sbjct: 639  GCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEE- 697

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            + L  H+EKLA+ +GL+     +P+R+ KN R C DCHT  K+ S +  REI +RD  RF
Sbjct: 698  QSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRF 757

Query: 1062 HHFREGECSCNDCW 1075
            H F  G CSC D W
Sbjct: 758  HRFTNGSCSCMDYW 771



 Score =  140 bits (352), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/547 (23%), Positives = 225/547 (41%), Gaps = 46/547 (8%)

Query: 182 LAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFG 241
           + K  Q S +      LN   K + L      H+Q++       S   + +L+  Y + G
Sbjct: 88  VPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNN-HASLANINTLLLLYAKCG 146

Query: 242 DFTSAAKAFFLYF--SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI 299
                   F  Y   S +   W++ +          Q L   +  +   G+       + 
Sbjct: 147 SIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQAL-TFFNRMRTTGIYPNHFTFSA 205

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL  C        G ++HA + K  F  D  +  AL++ Y KC  +  A  +F E+    
Sbjct: 206 ILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPH-R 264

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + WN +I+  ++N+ +  AI +FRE+       +S  I  +L ACA +     GKQ+H
Sbjct: 265 NLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVS--ISSVLSACAGLVELDFGKQVH 322

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G ++K  L   + V N L+ MY +    E AT++F    D ++ +WN MI          
Sbjct: 323 GSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMI---------- 372

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                                     G F   +++   T  + M   G  P+ +S S + 
Sbjct: 373 -------------------------MGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLF 407

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A   +  L  G   H ++L+ G   +  + +SL+ MY K   + +A +VF   K  N+V
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVV 467

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
            W ++I+ +   G    A K+  +M  E + P+ +++ S++S  S  G+  +     + M
Sbjct: 468 CWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSM 527

Query: 660 KN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            N   I P +  +  ++    +     E+ +F   M  E   P+S    +LL  CG    
Sbjct: 528 ANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFE---PDSLVWGALLGACGKHAN 584

Query: 719 LQNGKEI 725
           ++ G+E+
Sbjct: 585 VEMGREV 591


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like
            [Vitis vinifera]
          Length = 623

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/607 (34%), Positives = 332/607 (54%), Gaps = 43/607 (7%)

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            +   +G   +D A  +F+++ +    P++  +N ++ GH    +           Q  G 
Sbjct: 60   VDPSSGTSLIDYASRIFSQIQN----PNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGL 115

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
             P+  +   ++++ T+L  +  G ++HG+I+++G + D+YV  SL+ MY      + A  
Sbjct: 116  LPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATL 175

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
            +F  M                    +V                D+VSW S++ G++  G 
Sbjct: 176  IFQRM-------------------YYV----------------DVVSWTSMIRGFNKCGD 200

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             + A  +   M       N+VTW+++ISG  QN ++ ++++ F  +Q + ++ N T M S
Sbjct: 201  VESARKLFDQMPEK----NLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVS 256

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            ++ +C  LG L+ G+  H   +KNG   +  + T L+DMY++ G++  A  VF     + 
Sbjct: 257  VISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERD 316

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
              SW  +I G A++G  + ++  F  ++E G  P  ITFTA+L+AC + GLVE G++ F+
Sbjct: 317  TLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFE 376

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            SM  D+ + P +EHY CMVDLLG+AG L+EA  F+  MP KP+A +WGALLG+CRIH + 
Sbjct: 377  SMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNA 436

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
            E  E   + L +L P +S  Y L+ N+ A +  WE V  +R  M   G+K     S I++
Sbjct: 437  EIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIEL 496

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
            D  VH F+   + HP   +I      ++  ++  GY  +T     DIDEEEK   L  H+
Sbjct: 497  DGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHS 556

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            EKLAI +G+M++++  PIR++KN RVC DCHTA K +S V GRE+ +RD  RFHHFR+G 
Sbjct: 557  EKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGL 616

Query: 1069 CSCNDCW 1075
            CSC D W
Sbjct: 617  CSCMDYW 623



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 207/421 (49%), Gaps = 22/421 (5%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD-------VESANKLFS 353
           L+ C+ L    +   +HA +I+     DV     L+ F   C D       ++ A+++FS
Sbjct: 24  LETCSDLTHLKI---IHAYMIRTHIICDVFAASRLIAF---CVDPSSGTSLIDYASRIFS 77

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           ++ +  +  ++N +I     ++  + A   + + Q       + T   ++++C K+    
Sbjct: 78  QIQN-PNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCIS 136

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G Q HG+++K   E ++ V N L+ MY+     E AT +F  M   ++ SW SMI  + 
Sbjct: 137 MGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFN 196

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G V+ A  LF++M     + +++TW+ ++SG+  +  +   + L + +QS G R N +
Sbjct: 197 KCGDVESARKLFDQMP----EKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANET 252

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            +  V+ +   L  L+ G  +H Y+++NG+  +L +GT+L+DMY +   +  A  VF+++
Sbjct: 253 VMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDL 312

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
             R+ ++W +LI+G    G    + K    M E  + P  +++ +++S  S  G  +   
Sbjct: 313 PERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGF 372

Query: 654 VIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
            I   MK +  + P +  +  ++    +     E+ +F ++M    +KPN+    +LL  
Sbjct: 373 QIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMP---VKPNAPVWGALLGA 429

Query: 713 C 713
           C
Sbjct: 430 C 430



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 128/255 (50%), Gaps = 33/255 (12%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG------- 340
           +G++  +     ++K CTKL    +G + H  +IK GF+ DV+++ +L++ Y        
Sbjct: 113 QGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEA 172

Query: 341 ------------------------KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
                                   KC DVESA KLF ++ + ++ + W+ +I    +N  
Sbjct: 173 ATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE-KNLVTWSTMISGYAQNNH 231

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
           ++ A++LF+ +Q    +A    +V ++ +CA +GA   G++ H YV+K+ +  NL +   
Sbjct: 232 FDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTA 291

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           L+ MY+R   ++ A  VF+ + + +  SW ++I+     GY + +   F  M  + + P 
Sbjct: 292 LVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPR 351

Query: 497 IITWNCLLSGHFTHG 511
            IT+  +LS   +HG
Sbjct: 352 DITFTAVLSA-CSHG 365



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 123/310 (39%), Gaps = 35/310 (11%)

Query: 195 FCFLNET-NKFRCLSSVKSKHAQMIKMG-----KIWNS---------DDMVKSLIFHYLE 239
           F FL ++  K  C+S     H  +IK G      + NS         D    +LIF  + 
Sbjct: 122 FPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMY 181

Query: 240 F----------------GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
           +                GD  SA K F     ++   WS+ +  Y        + +E++ 
Sbjct: 182 YVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQ-NNHFDKAVELFK 240

Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            L  +GV     ++  ++  C  L A  LG   H  ++K G   ++ L  AL++ Y +C 
Sbjct: 241 VLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCG 300

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            ++ A  +F ++ +  D L W  +I     +   E ++K F  M  +       T   +L
Sbjct: 301 SIDKAVWVFEDLPE-RDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVL 359

Query: 404 QACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHN 461
            AC+  G    G QI   + +   +E  L    C++ +  R  KLE A R    M    N
Sbjct: 360 SACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPN 419

Query: 462 LSSWNSMISS 471
              W +++ +
Sbjct: 420 APVWGALLGA 429



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 14/235 (5%)

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI----DMYSKSGNLKSAREVFRKSA 765
           L+TC  L  L   K IH   ++   I D + A+ LI    D  S +  +  A  +F +  
Sbjct: 24  LETCSDLTHL---KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
           N  L  +N MI G +   N  +A   + +    G  PD +TF  L+ +C     +  G +
Sbjct: 81  NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQ 140

Query: 826 YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
               +   +     +   + +V +    G  + A    + M +  D   W +++      
Sbjct: 141 AHGHI-IKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRM-YYVDVVSWTSMIRGFNKC 198

Query: 886 GHLEYAEIASRRLFKLEP-CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
           G +E A    R+LF   P  N   ++ M++  A +N ++    L   +   GV++
Sbjct: 199 GDVESA----RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRA 249


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like
            [Cucumis sativus]
          Length = 720

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/715 (33%), Positives = 384/715 (53%), Gaps = 47/715 (6%)

Query: 401  KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            + L+ C        GK +H   +KS + ++  + N  + +YS+  +L  A RVFD   D 
Sbjct: 13   QFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDC 72

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            N+ S+N++IS+Y    YV+VA  LF++M     QPD +++N L++ +   G  Q    L 
Sbjct: 73   NVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 521  RGMQSLGFRPNGSSVSVVLQAV-TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M+      +G ++S ++ A    + L+   R+ H   +  GLD  + VG +L+  Y K
Sbjct: 129  LEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 580  NDCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
            N  L+ A+ +F  + ++R+ V+WNS++  Y        A ++  +M    +  D+ +  S
Sbjct: 186  NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 639  LVSGYS----IWG--QSKEALVIIHHMKNSGI--------------------------YP 666
            +++ ++    + G  Q    L+   + +NS +                           P
Sbjct: 246  VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 667  NVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            ++V W ++ISG SL  +   E+L+ F Q+Q    +P+  ++  ++  C  +     G+++
Sbjct: 306  DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 726  HCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            H L LK     +   V   LI MYSK GNL+ A+ +F         S+N MI G+A +G 
Sbjct: 366  HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 785  GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
            G +++ LF  +LE GF P  ITF ++LAAC ++G VE+G  YF+ M   + I P   H+S
Sbjct: 426  GFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485

Query: 845  CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
            CM+DLLG+AG L EA   I T+PF P    W ALLG+CRIHG++E A  A+ RL +L+P 
Sbjct: 486  CMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPL 545

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            N+A Y ++ N+ + + R +D   +R  M + GVK     SWI++++ +H+F AE   HP 
Sbjct: 546  NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPM 605

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDID----EEEKGKVLLSHTEKLAIVYGLMKT 1020
              +I   L  ++ ++KK+GY P+ R      D    + E+   L  H+EKLA+ +GLM T
Sbjct: 606  IKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMST 665

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +   PI V KN R+C DCH A KY+S V  REI +RD  RFH F++G+CSC   W
Sbjct: 666  REGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 135/569 (23%), Positives = 235/569 (41%), Gaps = 114/569 (20%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE- 359
           LK C        G  +HA  IK       +L    +  Y KCR + +A ++F    D   
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 360 -----------------------------DDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
                                        D + +N +I    R    + A +LF EM+ +
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134

Query: 391 SAKAISRTIVKMLQACA-KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                  T+  ++ AC   VG     +Q+H   + + L+S +SV N LI+ YS+N  L+ 
Sbjct: 135 FLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKE 191

Query: 450 ATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           A R+F  + +D +  SWNSM+ +Y        A  L+ +M    +  DI T   +L+   
Sbjct: 192 ARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT--- 248

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
              ++ NV  LL G+Q                              H  ++++G   + +
Sbjct: 249 ---AFTNVQDLLGGLQ-----------------------------FHAKLIKSGYHQNSH 276

Query: 569 VGTSLMDMYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGY------------CFKGLFV 615
           VG+ L+D+Y K   C+ + ++VFD + N ++V WN++ISGY            CF+ L V
Sbjct: 277 VGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQV 336

Query: 616 --------------------NAKKMLNQMEEEEIKPDLVS-----WNSLVSGYSIWGQSK 650
                               ++     Q+    +K D+ S      N+L++ YS  G  +
Sbjct: 337 VGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLR 396

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           +A  +   M       N V++ S+I+G  Q+    +SL  F +M +    P + T  S+L
Sbjct: 397 DAKTLFDTMPEH----NTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVL 452

Query: 711 QTCGGLGLLQNGK-EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKT 768
             C   G +++GK   + +  K G   +A   + +ID+  ++G L  A  +      +  
Sbjct: 453 AACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPG 512

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLE 797
              W+ ++    I+GN + AI   + LL+
Sbjct: 513 FFFWSALLGACRIHGNVELAIKAANRLLQ 541



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 9/314 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFS--RSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
           +LI  Y + G F   A+  F + S  R    W+S +  Y     E  + LE++ E+  +G
Sbjct: 178 ALITSYSKNG-FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHR-EGSKALELYLEMTVRG 235

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD-VESA 348
           +I     L  +L   T +     G++ HA LIK G+  + H+   L++ Y KC   +   
Sbjct: 236 LIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDC 295

Query: 349 NKLFSEVSDLEDDLLWNEIIM-VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            K+F E+S+  D +LWN +I    L  +  + A++ FR++Q    +    ++V ++ AC+
Sbjct: 296 RKVFDEISN-PDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACS 354

Query: 408 KVGAFHEGKQIHGYVLKSALESN-LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
            + +  +G+Q+HG  LK  + SN +SV N LI+MYS+   L  A  +FD+M +HN  S+N
Sbjct: 355 NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYN 414

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QS 525
           SMI+ Y   G    +  LF +M      P  IT+  +L+     G  ++       M Q 
Sbjct: 415 SMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQK 474

Query: 526 LGFRPNGSSVSVVL 539
            G  P     S ++
Sbjct: 475 FGIEPEAGHFSCMI 488


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 241/799 (30%), Positives = 406/799 (50%), Gaps = 78/799 (9%)

Query: 314  VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            +++ A LI  G  +D+     L + +     V    +LF++VS   D  L+N +I     
Sbjct: 31   LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSK-PDLFLFNVLIRGFSD 89

Query: 374  NEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N   +++I L+  + + ++ +  + T    + A +++     G  +H + +   + SNL 
Sbjct: 90   NGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLF 149

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            V + ++ +Y +  + ELA +VFD M +                                 
Sbjct: 150  VGSAIVDLYFKFTRAELARKVFDVMPER-------------------------------- 177

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
               D + WN ++SG   +  +++ + +   M  +G   + ++++ VL AV EL+  + G 
Sbjct: 178  ---DTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGM 234

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF-- 610
                   + GL  D+YV T L+ +Y K       + +FD +   +++++N++ISGY F  
Sbjct: 235  GIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNH 294

Query: 611  --------------KGLFVNAKKML---------NQMEEEEIKPDLVSWNSLVSGYSIWG 647
                           G  VN+  ++         N ++   +  +L    SL  G  +  
Sbjct: 295  ETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNL----SLKIGIILQP 350

Query: 648  QSKEALVIIHHMKNSGIYP----------NVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
                AL  ++   N   +           ++ +W ++ISG  QN     ++  F +M  +
Sbjct: 351  SVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ 410

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             + PN  T++S+L  C  LG L  GK +H L        + YV+T L+DMY+K G++  A
Sbjct: 411  -LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEA 469

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            R++F    +K + +WN MI G+ ++G+GKEA+ LF+E+L++G  P  +TF ++L AC +S
Sbjct: 470  RQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHS 529

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLV EG + F SM+ +Y   P  EHY+CMVD+LG+AG L  A +FI  MP +P   +WGA
Sbjct: 530  GLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGA 589

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+C IH + E A +AS+RLF+L+P N   Y L+ N+ +    +     +R  + +  +
Sbjct: 590  LLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL 649

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT-RCVYQDID 996
                  + I+ID   +VF++    HP    I+  L  L  +M++ GY  +T      D++
Sbjct: 650  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVE 709

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            +EEK  ++  H+EKLAI +GL+ TK    IR+IKN RVC DCHTA K++S +  R I +R
Sbjct: 710  DEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVR 769

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFHHF+ G CSC D W
Sbjct: 770  DANRFHHFKNGICSCGDYW 788



 Score =  166 bits (421), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 236/540 (43%), Gaps = 53/540 (9%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y +F     A K F +   R    W++ +  + S     ++ + V+ ++   G+ F S  
Sbjct: 158 YFKFTRAELARKVFDVMPERDTVLWNTMISGF-SRNSYFEDSIRVFVDMLDVGLSFDSTT 216

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +L    +L  + LG+ +     K+G   DV++   L++ Y KC        LF ++ 
Sbjct: 217 LATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQI- 275

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D  D + +N +I     N + E+A+ LFRE+  S  +  S T+V ++            +
Sbjct: 276 DQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSR 335

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            I    LK  +    SV   L ++Y R N+++ A ++FD   + +L+SWN+MIS YT  G
Sbjct: 336 LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNG 395

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             D A SLF +M      P +                                PN  +V+
Sbjct: 396 LTDRAISLFQEM-----MPQL-------------------------------SPNPVTVT 419

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +L A  +L  L  G+  HG I    L+ ++YV T+L+DMY K   +  A+++FD M ++
Sbjct: 420 SILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDK 479

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+V WN++I+GY   G    A K+  +M +  I P  V++ S++   S  G   E   I 
Sbjct: 480 NVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIF 539

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
           H M N+ G  P    +  ++    +      +L+F  +M  E   P      +LL  C  
Sbjct: 540 HSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLE---PGPAVWGALLGAC-- 594

Query: 716 LGLLQNGKEIHCLCLKNGFIKDA-----YVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
             ++    E+  +  K  F  D      YV   L ++YS   N   A  V +    + LA
Sbjct: 595 --MIHKNTEMANVASKRLFQLDPENVGYYVL--LSNIYSTDRNFPKAASVRQVVKKRKLA 650



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 232/537 (43%), Gaps = 78/537 (14%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           +GV +HA  I  G   ++ +  A+++ Y K    E A K+F +V    D +LWN +I   
Sbjct: 131 VGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVF-DVMPERDTVLWNTMISGF 189

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            RN  +E++I++F +M        S T+  +L A A++  +  G  I     K  L S++
Sbjct: 190 SRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDV 249

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V   LIS+YS+  K      +FD +   +L S+N+MIS YT                  
Sbjct: 250 YVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYT------------------ 291

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                           F H + ++ +TL R + + G R N S++  ++        L+  
Sbjct: 292 ----------------FNHET-ESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS 334

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           R      L+ G+     V T+L  +Y + + +Q A+++FD    +++ +WN++ISGY   
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQN 394

Query: 612 GLFVNAKKMLNQM----------------------------------EEEEIKPDLVSWN 637
           GL   A  +  +M                                  + E ++ ++    
Sbjct: 395 GLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVST 454

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           +LV  Y+  G   EA  +   M +     NVVTW ++I+G   + + +E+LK F +M Q 
Sbjct: 455 ALVDMYAKCGSIVEARQLFDLMVDK----NVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            I P   T  S+L  C   GL+  G EI H +    GF   +     ++D+  ++G L +
Sbjct: 511 GIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTN 570

Query: 757 ARE-VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           A E + R       A W  ++    I+ N + A +    L +    P+ + +  LL+
Sbjct: 571 ALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQ--LDPENVGYYVLLS 625


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 241/765 (31%), Positives = 386/765 (50%), Gaps = 119/765 (15%)

Query: 313  GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVK 371
            G+  HA ++K G   D  ++ A+++ Y +   +  A K+F E+ D E  +  WN ++   
Sbjct: 114  GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173

Query: 372  LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             + E    A  LF  M                                        E N+
Sbjct: 174  WKWESEGQAQWLFDVMP---------------------------------------ERNV 194

Query: 432  SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
                 +++ Y++   LE A R FD M + ++ SWN+M+S Y   G  +    LF++M ++
Sbjct: 195  ITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNA 254

Query: 492  RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
             I+PD  TW  ++S   + G      +L+R +                            
Sbjct: 255  GIEPDETTWVTVISACSSRGDPCLAASLVRTLH--------------------------- 287

Query: 552  RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCF 610
                    +  +  + +V T+L+DMY K   +  A+ +FD +   RN V WN++IS Y  
Sbjct: 288  --------QKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTR 339

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
             G   +A+++ N M    +    V+WNS+++GY+  GQS  A+ +   M           
Sbjct: 340  VGNLDSARELFNTMPGRNV----VTWNSMIAGYAQNGQSAMAIELFKEM----------- 384

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
                                   +  + + P+  TM S++  CG LG L+ G  +     
Sbjct: 385  -----------------------ITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLT 421

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            +N           +I MYS+ G+++ A+ VF++ A + + S+N +I GFA +G+G EAI 
Sbjct: 422  ENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAIN 481

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            L   + E G +PD +TF  +L AC ++GL+EEG K F+S+       P I+HY+CMVDLL
Sbjct: 482  LMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLL 536

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+ G L++A   +  MP +P A ++G+LL + RIH  +E  E+A+ +LF+LEP NS N+ 
Sbjct: 537  GRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFI 596

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A + RW+DVER+R +M + GVK    WSW++    +H F      H  + +IY 
Sbjct: 597  LLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQ 656

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L  +M++ GY+ D  CV +D++EEEK +++ +H+EKLAI Y L+ +++ A IRV+K
Sbjct: 657  LLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVK 716

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCHTA K +S + GR I +RD  RFH F +G CSC D W
Sbjct: 717  NLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 198/441 (44%), Gaps = 58/441 (13%)

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           LFN    S + P++  +  +L  +     +  V+ +   MQ  G RP+     +++++  
Sbjct: 56  LFN----STLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG 111

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN----------- 592
                  G   H ++L+ G   D +V  +++DMY +   + +A++VFD            
Sbjct: 112 -----NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADW 166

Query: 593 ----------------------MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
                                 M  RN++ W ++++GY        A++  + M E  + 
Sbjct: 167 NAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSV- 225

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
              VSWN+++SGY+  G ++E L +   M N+GI P+  TW ++IS      +   +   
Sbjct: 226 ---VSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASL 282

Query: 691 FIQMQQEDIKPNSTTMSSLLQ---TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
              + Q+ I+ N    ++LL     CG +G  +       +  + G  +++     +I  
Sbjct: 283 VRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARR------IFDELGAYRNSVTWNAMISA 336

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAIT 806
           Y++ GNL SARE+F     + + +WN MI G+A  G    AI LF E++      PD +T
Sbjct: 337 YTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 396

Query: 807 FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
             ++++AC + G +E G  +     T+  I  +I  ++ M+ +  + G +++A    + M
Sbjct: 397 MVSVISACGHLGALELG-NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 455

Query: 867 PFKPDATIWGALLGSCRIHGH 887
             + D   +  L+     HGH
Sbjct: 456 ATR-DVVSYNTLISGFAAHGH 475



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 140/309 (45%), Gaps = 37/309 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y +  D  +A + F     RS   W++ L  Y    G  +E+L ++ E+   G+ 
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQ-NGLAEEVLRLFDEMVNAGIE 257

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   ++  C+      L   +  +L ++    +  ++ AL++ Y KC  + +A ++
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRI 317

Query: 352 FSEVSDLEDDLLWNEIIMVKLR-------------------------------NEKWENA 380
           F E+    + + WN +I    R                               N +   A
Sbjct: 318 FDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMA 377

Query: 381 IKLFREMQFSSAKAISR---TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           I+LF+EM   +AK ++    T+V ++ AC  +GA   G  +  ++ ++ ++ ++S  N +
Sbjct: 378 IELFKEM--ITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAM 435

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           I MYSR   +E A RVF  M   ++ S+N++IS +   G+   A +L + M    I+PD 
Sbjct: 436 IFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDR 495

Query: 498 ITWNCLLSG 506
           +T+  +L+ 
Sbjct: 496 VTFIGVLTA 504



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 22/294 (7%)

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
           H + NS + PNV  +TS++      +++ + +  F  MQ   ++P++     L+++ G  
Sbjct: 54  HLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNG 113

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN--KTLASWNC 774
           G+       H   LK G   DA+V   +IDMY++ G +  AR+VF +  +  + +A WN 
Sbjct: 114 GI-----GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNA 168

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
           M+ G+  + +  +A  LF  + E     + IT+TA++        +E   +YFD M    
Sbjct: 169 MVSGYWKWESEGQAQWLFDVMPER----NVITWTAMVTGYAKVKDLEAARRYFDCMPER- 223

Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEA---WDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
               ++  ++ M+    + G  +E    +D +     +PD T W  ++ +C   G    A
Sbjct: 224 ----SVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLA 279

Query: 892 EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV-KSVLVWS 944
               R L + +     N  +   LL M  +   +   R   DE+G  ++ + W+
Sbjct: 280 ASLVRTLHQKQI--QLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWN 331


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 216/609 (35%), Positives = 326/609 (53%), Gaps = 33/609 (5%)

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            +N L+      G  ++ L L   M   +     +  + +  L++ + +  L  GR    Y
Sbjct: 86   YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
             ++ GL  D +V +SL+ MY     +  A+ VFD  +   +V WN++++ Y   G ++  
Sbjct: 146  AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205

Query: 618  KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN---------- 667
             +M   M E  +  D V+  S+V+     G +K    +  H+   G+  N          
Sbjct: 206  VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265

Query: 668  ---------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
                                 VV W+++ISG  Q +  RE+L  F +MQ   ++PN  TM
Sbjct: 266  YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
             S+L  C  LG L+ GK +H    +        + T L+D Y+K G +  A E F     
Sbjct: 326  VSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV 385

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            K   +W  +I G A  G G+EA+ LF  + E G +P  +TF  +L AC +S LVEEG ++
Sbjct: 386  KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRH 445

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            FDSM+ DY I P +EHY CMVDLLG+AG +DEA+ FIRTMP +P+A IW ALL SC +H 
Sbjct: 446  FDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHR 505

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            ++   E A +++  L P +S +Y L+ N+ A + +W+D   +R  M + G++     S I
Sbjct: 506  NVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLI 565

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            ++D +V  F AE + HP   EIY ++  ++  +K  GYVP+T  V  +++E EK   +  
Sbjct: 566  ELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSH 625

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            H+EKLAI +GLMK    A IR+ KN RVC+DCH+A K +S V  REI +RD   FHHF++
Sbjct: 626  HSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKD 685

Query: 1067 GECSCNDCW 1075
            G CSCND W
Sbjct: 686  GTCSCNDYW 694



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 184/415 (44%), Gaps = 40/415 (9%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LK C+++ A  +G  V A  +KRG   D  +  +L++ Y  C DV +A  +F + ++   
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVF-DAAEESG 185

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
            ++WN I+   L+N  W   +++F+ M          T+V ++ AC ++G    GK + G
Sbjct: 186 VVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAG 245

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
           +V +  L  N  +   L+ MY++  ++  A R+FD M+                      
Sbjct: 246 HVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSR-------------------- 285

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
                          D++ W+ ++SG+      +  L L   MQ     PN  ++  VL 
Sbjct: 286 ---------------DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLS 330

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
           A   L  L+ G+  H Y+ R  L     +GT+L+D Y K  C+ +A E F++M  +N   
Sbjct: 331 ACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWT 390

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM- 659
           W +LI G    G    A ++ + M E  I+P  V++  ++   S     +E       M 
Sbjct: 391 WTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMA 450

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
           ++ GI P V  +  ++    +     E+ +F   M    I+PN+    +LL +C 
Sbjct: 451 RDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMP---IEPNAVIWRALLSSCA 502



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/518 (21%), Positives = 213/518 (41%), Gaps = 110/518 (21%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           +N ++   L     E+A+ LF EM    S+  A   T    L++C+++ A   G+ +  Y
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            +K  L ++  V + LI MY+    +  A  VFD+ ++  +  WN+++++Y         
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAY--------- 196

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                                       +G +  V+ + +GM  +G   +  ++  V+ A
Sbjct: 197 --------------------------LKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTA 230

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
              +   K G+   G++   GL  +  + T+LMDMY K   +  A+ +FD M++R++VAW
Sbjct: 231 CGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAW 290

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE---------- 651
           +++ISGY        A  + ++M+   ++P+ V+  S++S  ++ G  +           
Sbjct: 291 SAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRR 350

Query: 652 ---------ALVIIHHMKNSGIYPNVV------------TWTSLISGSLQNENYRESLKF 690
                       ++      G   + V            TWT+LI G   N   RE+L+ 
Sbjct: 351 KRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALEL 410

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYS 749
           F  M++  I+P   T   +L  C    L++ G+       ++  IK      G ++D+  
Sbjct: 411 FSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLG 470

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           ++G +  A +  R                                      +P+A+ + A
Sbjct: 471 RAGLVDEAYQFIRT----------------------------------MPIEPNAVIWRA 496

Query: 810 LLAAC---KNSGLVEEGWKYFDSM----STDYNIIPTI 840
           LL++C   +N G+ EE  K   S+    S DY ++  I
Sbjct: 497 LLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNI 534



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 138/309 (44%), Gaps = 5/309 (1%)

Query: 193 SGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFF 251
           +  C L   ++   L   +   A  +K G +  +D  V  SLI  Y   GD  +A   F 
Sbjct: 122 TAACALKSCSRMCALDVGRGVQAYAVKRGLV--ADRFVLSSLIHMYASCGDVAAARLVFD 179

Query: 252 LYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFW 311
                    W++ +  Y    G+  E++E++  +   GV F    L  ++  C ++    
Sbjct: 180 AAEESGVVMWNAIVAAYLK-NGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAK 238

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG  V   + + G   +  L  ALM+ Y KC ++  A +LF  +    D + W+ +I   
Sbjct: 239 LGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQS-RDVVAWSAMISGY 297

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            + ++   A+ LF EMQ +  +    T+V +L ACA +GA   GK +H YV +  L    
Sbjct: 298 TQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTT 357

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            +   L+  Y++   ++ A   F+SM   N  +W ++I      G    A  LF+ M  +
Sbjct: 358 ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREA 417

Query: 492 RIQPDIITW 500
            I+P  +T+
Sbjct: 418 GIEPTDVTF 426


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/569 (36%), Positives = 314/569 (55%), Gaps = 32/569 (5%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            +LQA      +  GR  HG  ++  + +      +L+DMY K   L  A  VFD M  R 
Sbjct: 4    ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
            +V W SLI+ Y  +GL   A ++ ++M+ E + PD+ +  +++   +  G  +    + +
Sbjct: 64   VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 658  HMKNSGIYPNV-------------------------------VTWTSLISGSLQNENYRE 686
            +++ + +  N+                               ++W ++I G  +N    E
Sbjct: 124  YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +L  F  M  E +KP+ TT++ +L  C  L  L  GKE+H   L+NGF  D  VA  L+D
Sbjct: 184  ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY K G    AR +F     K L +W  MI G+ ++G G  AI  F+E+ + G +PD ++
Sbjct: 243  MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F ++L AC +SGL++EGW++F+ M  + N+ P +EHY+C+VDLL ++G L  A+ FI++M
Sbjct: 303  FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSM 362

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            P +PDATIWGALL  CRIH  ++ AE  +  +F+LEP N+  Y L+ N  A + +WE+V+
Sbjct: 363  PIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVK 422

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            +LR  +   G+K     SWI++   VH+F A  + HP   +I   L  L S+MK+ GY P
Sbjct: 423  KLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFP 482

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
             TR    + D  +K   L  H+EKLA+ +G++       IRV KN RVC DCH  AK++S
Sbjct: 483  KTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFIS 542

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
               GREI LRD  RFHHF++G C C   W
Sbjct: 543  KTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 188/415 (45%), Gaps = 41/415 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL+ C       LG  VH S +K    +       L++ Y KC  ++ A  +F  +S + 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS-VR 62

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
             + W  +I    R    + AI+LF EM          TI  +L ACA  G+   GK +H
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            Y+ ++ ++SN+ VCN L+ MY++   +E A  VF  M                      
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP--------------------- 161

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                           DII+WN ++ G ++  S  N    L G   L  +P+G++++ +L
Sbjct: 162 --------------VKDIISWNTMIGG-YSKNSLPNEALSLFGDMVLEMKPDGTTLACIL 206

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A   L  L  G+E HG+ILRNG   D  V  +L+DMYVK      A+ +FD +  ++++
Sbjct: 207 PACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLI 266

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
            W  +I+GY   G   NA    N+M +  I+PD VS+ S++   S  G   E     + M
Sbjct: 267 TWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVM 326

Query: 660 KNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           ++   + P +  +  ++    ++     + KF   M    I+P++T   +LL  C
Sbjct: 327 QDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMP---IEPDATIWGALLSGC 378



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 194/449 (43%), Gaps = 75/449 (16%)

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           +V +LQACA  G    G+ +HG  +K+ +    + CN L+ MY++   L+ A  VFD M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
              + +W S+I++Y   G  D A  LF++M+   + PDI T   +L     +GS +N   
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN--- 117

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
                                           G++ H YI  N +  +++V  +LMDMY 
Sbjct: 118 --------------------------------GKDVHNYIRENDMQSNIFVCNALMDMYA 145

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------ 632
           K   +++A  VF  M  ++I++WN++I GY    L   A  +   M   E+KPD      
Sbjct: 146 KCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLAC 204

Query: 633 ----LVSWNSLVSGYSIWG-----------QSKEALVIIHHMKNSGIYP----------N 667
                 S  SL  G  + G           Q   ALV ++      +            +
Sbjct: 205 ILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKD 264

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           ++TWT +I+G   +     ++  F +M+Q  I+P+  +  S+L  C   GLL  G     
Sbjct: 265 LITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFN 324

Query: 728 LCLKNGFIK---DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYG 783
           +      +K   + Y    ++D+ ++SG L  A +  +    +  A+ W  ++ G  I+ 
Sbjct: 325 VMQDECNVKPKLEHYAC--IVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHH 382

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLA 812
           + K A  +   + E   +P+   +  LLA
Sbjct: 383 DVKLAEKVAEHVFE--LEPENTGYYVLLA 409



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 143/294 (48%), Gaps = 4/294 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           ++ H   +K    W +     +L+  Y + G    A   F L   R+   W+S +  Y +
Sbjct: 18  RAVHGSGVKACVHWKTT-FCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAY-A 75

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G   E + ++ E+  +GV      +T +L  C    +   G +VH  + +     ++ 
Sbjct: 76  REGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIF 135

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  ALM+ Y KC  +E AN +F E+  ++D + WN +I    +N     A+ LF +M   
Sbjct: 136 VCNALMDMYAKCGSMEDANSVFLEMP-VKDIISWNTMIGGYSKNSLPNEALSLFGDMVL- 193

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             K    T+  +L ACA + +   GK++HG++L++   S+  V N L+ MY +     LA
Sbjct: 194 EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLA 253

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +FD +   +L +W  MI+ Y   G+ + A + FN+M  + I+PD +++  +L
Sbjct: 254 RLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISIL 307


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/737 (32%), Positives = 379/737 (51%), Gaps = 69/737 (9%)

Query: 279 LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
           L++W   H    +  S     ++K C  L A  LG  VH +    G D D+ +  AL+  
Sbjct: 133 LKMWA--HPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKM 190

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           Y     +  A ++F  +++  D +LWN ++   ++     +A++LF +M+ S  +    T
Sbjct: 191 YANGGLLWDARQVFDGMAE-RDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFAT 249

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           +   L   A       G Q+H   +K  LES ++V N L+SMY++   L           
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCL----------- 298

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
                               D  W LF  M     + D++TWN ++SG   +G     L 
Sbjct: 299 --------------------DDGWKLFGLMP----RDDLVTWNGMISGCVQNGFVDQALL 334

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           L   MQ  G RP+  ++  +L A+T+L     G+E HGYI+RN +  D+++ ++L+D+Y 
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYF 394

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           K   ++ AQ V+D+ K  ++V  +++ISGY   G+   A KM   + E+ I+P+ V+  S
Sbjct: 395 KCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIAS 454

Query: 639 LVSGYSIWGQSKEA-------------------------------LVIIHHMKNSGIYPN 667
           ++   +     K                                 L + H++ +     +
Sbjct: 455 VLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            VTW S+IS   QN    E+L  F +M  E +K ++ T+SS+L  C  L  +  GKEIH 
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHG 574

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
           + +K     D +  + LIDMY K GNL+ A  VF     K   SWN +I  +  YG  KE
Sbjct: 575 VVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKE 634

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
           ++ L   + E GF+ D +TF AL++AC ++G V+EG + F  M+ +Y I P +EH++CMV
Sbjct: 635 SVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMV 694

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
           DL  +AG LD+A + I  MPFKPDA IWGALL +CR+H ++E AEIAS+ LFKL+P NS 
Sbjct: 695 DLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSG 754

Query: 908 NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            Y LM N+ A++ RW+ V ++R  M +  V+ +  +SW+ ++   H+F A    HP + +
Sbjct: 755 YYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSED 814

Query: 968 IYFELYHLVSEMKKLGY 984
           IY  L  ++ E+++ G+
Sbjct: 815 IYMSLKSILLELREEGH 831



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 259/600 (43%), Gaps = 72/600 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y   G    A + F     R    W+  ++ Y    G V   +E++G++   G  
Sbjct: 186 ALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK-AGSVSSAVELFGDMRASGCE 244

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L   L +       + GV++H   +K G + +V +   L++ Y KC+ ++   KL
Sbjct: 245 PNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKL 304

Query: 352 FSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           F  +    DDL+ WN +I   ++N   + A+ LF +MQ S  +  S T+V +L A   + 
Sbjct: 305 FGLMP--RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLN 362

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
            F++GK++HGY++++ +  ++ + + L+ +Y +   + +A  V+DS K  ++   ++MIS
Sbjct: 363 GFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y                                     +G  Q  + + R +   G RP
Sbjct: 423 GYV-----------------------------------LNGMSQEAVKMFRYLLEQGIRP 447

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           N  +++ VL A   +  +K G+E H Y L+N  +   YV ++LMDMY K   L  +  +F
Sbjct: 448 NAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIF 507

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----I 645
             +  ++ V WNS+IS +   G    A  +  +M  E +K   V+ +S++S  +      
Sbjct: 508 SKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIY 567

Query: 646 WGQSKEALVI--------------------------IHHMKNSGIYPNVVTWTSLISGSL 679
           +G+    +VI                           H +  S    N V+W S+I+   
Sbjct: 568 YGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYG 627

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDA 738
                +ES+     MQ+E  K +  T  +L+  C   G +Q G  +  C+  +       
Sbjct: 628 AYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRM 687

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLE 797
                ++D+YS++G L  A E+      K  A  W  ++    ++ N + A +   EL +
Sbjct: 688 EHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFK 747



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 227/530 (42%), Gaps = 70/530 (13%)

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSRNNKLELATRVFD 455
           R ++ +L+ C        G Q+HG  + + L  ++ ++   L+ MY    +   A  VF 
Sbjct: 40  RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFS 99

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
           S+                  G    A                + WN L+ G    G Y++
Sbjct: 100 SLPR----------------GAAACA----------------LPWNWLIRGLTMAGDYRS 127

Query: 516 VLTLLRGM--QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            L     M        P+  +   V+++   L  +  GR  H      GLD D++VG++L
Sbjct: 128 ALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSAL 187

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           + MY     L +A++VFD M  R+ V WN ++ GY   G   +A ++   M     +P+ 
Sbjct: 188 IKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNF 247

Query: 634 VSWNSLVSGYS-----IWGQSKEALVIIHHMKNS------------------------GI 664
            +    +S  +      +G     L + + +++                         G+
Sbjct: 248 ATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGL 307

Query: 665 YP--NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
            P  ++VTW  +ISG +QN    ++L  F  MQ+  I+P+S T+ SLL     L     G
Sbjct: 308 MPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQG 367

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           KE+H   ++N    D ++ + L+D+Y K   ++ A+ V+  S    +   + MI G+ + 
Sbjct: 368 KELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLN 427

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD-SMSTDYNIIPTIE 841
           G  +EA+ +F  LLE G +P+A+   ++L AC +   ++ G +    ++   Y     +E
Sbjct: 428 GMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVE 487

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             S ++D+  K G LD +  +I +     D   W +++ S   +G  E A
Sbjct: 488 --SALMDMYAKCGRLDLS-HYIFSKISAKDEVTWNSMISSFAQNGEPEEA 534


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 740

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/744 (31%), Positives = 376/744 (50%), Gaps = 84/744 (11%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            ++ C  +GA    K IHG ++++       + N ++  Y+       A RVFD +   NL
Sbjct: 10   IKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNL 69

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
             SWN+++ +Y+  G++      F K+       D +TWN L+ G+   G        L G
Sbjct: 70   FSWNNLLLAYSKSGHLSEMERTFEKLPDR----DGVTWNVLIEGYSLSG--------LVG 117

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKY---------GRESHGYILRNGLDYDLYVGTSL 573
                 +       S  L  VT + +LK          G++ HG +++ G +  L VG+ L
Sbjct: 118  AAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 177

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML------------ 621
            +DMY K  C+ +A++VF  + +RN V +N+L+ G    G+  +A ++             
Sbjct: 178  LDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSA 237

Query: 622  -------NQMEEEEI-----------KPDLVSWNSLVS-----GYSIWGQSKEALVIIHH 658
                   N ME+E I           K D   + S++      G    G+   A +I  +
Sbjct: 238  MIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTN 297

Query: 659  MKNSGIY---------------------------PNVVTWTSLISGSLQNENYRESLKFF 691
            +++  IY                            NVV+WT+++ G  Q     E++K F
Sbjct: 298  LQDH-IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIF 356

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
            + MQ+  I P+  T+   +  C  +  L+ G + H   +  G I    V+  L+ +Y K 
Sbjct: 357  LDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKC 416

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G++  +  +F +   +   SW  M+  +A +G   EAI LF ++++ G +PD +T T ++
Sbjct: 417  GDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVI 476

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            +AC  +GLVE+G +YF+ M  +Y I+P+  HYSCM+DL  ++G ++EA  FI  MPF+PD
Sbjct: 477  SACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPD 536

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A  W  LL +CR  G+LE  + A+  L +L+P + A Y L+ ++ A   +W+ V +LR  
Sbjct: 537  AIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRG 596

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M E  V+     SWI+    +H FSA+    P + +IY +L  L  ++   GY PDT  V
Sbjct: 597  MKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFV 656

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
            + D++E  K K+L  H+E+LAI +GL+   S  PIRV KN RVC DCH A K++S V GR
Sbjct: 657  HHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGR 716

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD  RFH F++G CSC D W
Sbjct: 717  EILVRDAVRFHRFKDGTCSCGDFW 740



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 223/523 (42%), Gaps = 70/523 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + G  +   + F     R    W+  +E Y S  G V   ++ +  +      
Sbjct: 74  NLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGY-SLSGLVGAAVKAYNTMMKDFSS 132

Query: 292 FRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
             +R+ L  +LKL +      LG ++H  +IK GF+  + +   L++ Y K   +  A K
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192

Query: 351 LFSEVSDL-----------------------------EDDLLWNEIIMVKLRNEKWENAI 381
           +F  + D                              +D + W+ +I    +N   + AI
Sbjct: 193 VFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAI 252

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
           + FREM+    K        +L AC  +GA ++G+QIH  ++++ L+ ++ V + LI MY
Sbjct: 253 ECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMY 312

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            +   L  A  VFD MK  N+ SW +M+  Y   G    A  +F  M  S I PD     
Sbjct: 313 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPD----- 367

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
                H+T G                           + A   +  L+ G + HG  +  
Sbjct: 368 -----HYTLGQ-------------------------AISACANISSLEEGSQFHGKAITA 397

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
           GL + + V  SL+ +Y K   + ++  +F+ M  R+ V+W +++S Y   G  V A ++ 
Sbjct: 398 GLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLF 457

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQ 680
           ++M +  +KPD V+   ++S  S  G  ++       M N  GI P+   ++ +I    +
Sbjct: 458 DKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSR 517

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           +    E++ F   M     +P++   ++LL  C   G L+ GK
Sbjct: 518 SGRIEEAMGFINGMP---FRPDAIGWTTLLSACRNKGNLEIGK 557


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/605 (36%), Positives = 328/605 (54%), Gaps = 47/605 (7%)

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            SY  LG +D +  +FN  +    +P++ +++ ++  H     +         M S G  P
Sbjct: 88   SYAALGRLDCSVFVFNTFD----EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEP 143

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  + S VL++ +    L+ G+  H   ++ GL  DLYV T L+D+Y +   +  A+++F
Sbjct: 144  NAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLF 199

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
            D M  R+                                   LVS  ++++ YS  G+  
Sbjct: 200  DKMPERS-----------------------------------LVSLTTMLTCYSKMGELD 224

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            +A  +   MK      +VV W  +I G  Q+    ESLK F +M      PN  T+ ++L
Sbjct: 225  KARSLFEGMKER----DVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVL 280

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              CG LG L++G+ IH      G   + +V T LIDMYSK G+L+ AR VF +  +K + 
Sbjct: 281  SACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVV 340

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +WN MI+G+A++G  + A+ LF E+ ETG +P  ITF  +L+AC + GLVEEG  +F  M
Sbjct: 341  AWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLM 400

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
               Y I P IEHY CMV+LLG+AG+L+EA+  ++ M    D  +WG LLG CR+H +++ 
Sbjct: 401  RDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKL 460

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             E  ++ L   +  NS  Y L+ N+ A +  WE V ++R  M E G++     S I++D 
Sbjct: 461  GEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDN 520

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             VH F A    HP + EIY  L  + S +K  GY P T  V  D+ EE+K + L  H+EK
Sbjct: 521  KVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEK 580

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LAI +GL+ TK    ++++KN RVCSDCHT  K +S + GR+I +RD  RFHHF +G CS
Sbjct: 581  LAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCS 640

Query: 1071 CNDCW 1075
            C D W
Sbjct: 641  CGDYW 645



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 32/227 (14%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF------------------SE 354
           G  +H   IK G   D++++  L++ Y +  DV  A +LF                  S+
Sbjct: 160 GKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSK 219

Query: 355 VSDLE------------DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
           + +L+            D + WN +I    ++     ++KLFR M  + A     T++ +
Sbjct: 220 MGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAV 279

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L AC ++GA   G+ IH Y+    ++ N+ V   LI MYS+   LE A  VFD ++D ++
Sbjct: 280 LSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDV 339

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS--GH 507
            +WNSMI  Y   G+   A  LF +M  +  +P  IT+  +LS  GH
Sbjct: 340 VAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGH 386



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 35/283 (12%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L S K  H Q IK+G    SD  V++ L+  Y   GD   A + F     RS    ++ L
Sbjct: 157 LESGKVLHCQAIKLG--LGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTML 214

Query: 266 EDYESFG--GEVQELLE--------VWGELHG----KGV------IFRSRILT------- 298
             Y   G   + + L E         W  + G     GV      +FR  ++        
Sbjct: 215 TCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEV 274

Query: 299 ---IILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
               +L  C +L A   G  +H+ +  +G   +VH+  AL++ Y KC  +E A  +F  +
Sbjct: 275 TVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRI 334

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            D +D + WN +I+    +   ++A++LF EM  +  K    T + +L AC   G   EG
Sbjct: 335 RD-KDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEG 393

Query: 416 KQIHGYVL-KSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           +     +  K  +E  +    C++++  R   LE A  +  +M
Sbjct: 394 RSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNM 436


>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 742

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/701 (32%), Positives = 360/701 (51%), Gaps = 46/701 (6%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESNLS-VCN 435
            +  I L+R M        + T   + + CA+ GA    G+ +H    ++ L S +  + +
Sbjct: 85   DRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIAS 144

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             +I MY+       A R FD     ++ +W ++IS    +G +D A  L  +        
Sbjct: 145  PIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVR---- 200

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            +++TW  L+SG+   G     +     M S G  P+  +V  +L A  +L+ L +G   H
Sbjct: 201  NVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLH 260

Query: 556  GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
              +    +     +  +L+DMY K      A+EVFD +                      
Sbjct: 261  MLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALG--------------------- 299

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                          +P    WN+++ GY   G    A  +   M++     +V+T+ SLI
Sbjct: 300  ---------RGRGPQP----WNAMIDGYCKVGHVDIARSLFDQMEDH----DVITFNSLI 342

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            +G +     RE+L  F +M++  +  ++ TM  LL     LG L  G+ +H  C++   +
Sbjct: 343  TGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHA-CIEQRLV 401

Query: 736  -KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
             +D Y+ T L+DMY K G ++ A   F++ + + + +W+ MI G A  G GK A+  F  
Sbjct: 402  ERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFW 461

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +   GF  +++T+ A+L AC +S L++EG  YFD M   +NI P IEHY CM+DLLG++G
Sbjct: 462  MKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSG 521

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             LDEA D ++TMP +P+A IW ++L +CR+H +++ A+ A+  L KLEP   A Y  M N
Sbjct: 522  LLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYN 581

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            +   S +WED  ++R  M++ GVK    +S I +   VH F      HP   EI   +  
Sbjct: 582  IYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEE 641

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            +   +K  GY P T  +  D+DEEEK + LL+H+EKLAI +GL+      P+ +IKN RV
Sbjct: 642  IGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRV 701

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH+A K +S +  REI +RD +RFHHFR G CSCND W
Sbjct: 702  CEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742



 Score =  126 bits (317), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 173/371 (46%), Gaps = 10/371 (2%)

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           ++ A +L +  + + + + W  +I    R  +   A+  F  M          T++ ML 
Sbjct: 187 LDDARRLLAR-APVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLS 245

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLS 463
           AC ++   + G  +H  V    +  +  +   LI MY++      A  VFD++ +     
Sbjct: 246 ACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQ 305

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
            WN+MI  Y  +G+VD+A SLF++M       D+IT+N L++G+   G  +  L L   M
Sbjct: 306 PWNAMIDGYCKVGHVDIARSLFDQMEDH----DVITFNSLITGYIHGGRLREALLLFTKM 361

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
           +  G   +  ++  +L A   L  L  GR  H  I +  ++ D+Y+GT+L+DMY+K   +
Sbjct: 362 RRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRV 421

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
           + A   F  M  R++  W+++I G  F G+   A +    M+ +    + V++ ++++  
Sbjct: 422 EEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTAC 481

Query: 644 SIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           S      E  +    M+    I P +  +  +I    ++    E++     +Q   ++PN
Sbjct: 482 SHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDL---VQTMPMQPN 538

Query: 703 STTMSSLLQTC 713
           +   +S+L  C
Sbjct: 539 AVIWASILSAC 549



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 34/293 (11%)

Query: 222 KIWNSDDMVKSLIFHYLEFGDFTSAAKAF-FLYFSRSYADWSSF---------------- 264
           ++  SD +V +LI  Y + GD   A + F  L   R    W++                 
Sbjct: 267 RMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSL 326

Query: 265 ---LEDYESF-----------GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAF 310
              +ED++             GG ++E L ++ ++   G+   +  +  +L     L A 
Sbjct: 327 FDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGAL 386

Query: 311 WLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
             G  +HA + +R  + DV+L  AL++ Y KC  VE A   F ++S + D   W+ +I  
Sbjct: 387 PQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMS-VRDVHTWSAMIGG 445

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV-LKSALES 429
              N   + A++ F  M+     A S T + +L AC+      EG+     + L   +  
Sbjct: 446 LAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRP 505

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
            +    C+I +  R+  L+ A  +  +M    N   W S++S+      VD+A
Sbjct: 506 QIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLA 558


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700-like
            [Cucumis sativus]
          Length = 788

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 241/799 (30%), Positives = 406/799 (50%), Gaps = 78/799 (9%)

Query: 314  VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            +++ A LI  G  +D+     L + +     V    +LF++VS   D  L+N +I     
Sbjct: 31   LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSK-PDLFLFNVLIRGFSD 89

Query: 374  NEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N   +++I L+  + + ++ +  + T    + A +++     G  +H + +   + SNL 
Sbjct: 90   NGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLF 149

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            V + ++ +Y +  + ELA +VFD M +                                 
Sbjct: 150  VGSAIVDLYFKFTRAELARKVFDVMPER-------------------------------- 177

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
               D + WN ++SG   +  +++ + +   M  +G   + ++++ VL AV EL+  + G 
Sbjct: 178  ---DTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGM 234

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK- 611
                   + GL  D+YV T L+ +Y K       + +FD +   +++++N++ISGY F  
Sbjct: 235  GIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNH 294

Query: 612  ---------------GLFVNAKKML---------NQMEEEEIKPDLVSWNSLVSGYSIWG 647
                           G  VN+  ++         N ++   +  +L    SL  G  +  
Sbjct: 295  ETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNL----SLKIGIILQP 350

Query: 648  QSKEALVIIHHMKNSGIYP----------NVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
                AL  ++   N   +           ++ +W ++ISG  QN     ++  F +M  +
Sbjct: 351  SVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ 410

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             + PN  T++S+L  C  LG L  GK +H L        + YV+T L+DMY+K G++  A
Sbjct: 411  -LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEA 469

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            R++F    +K + +WN MI G+ ++G+GKEA+ LF+E+L++G  P  +TF ++L AC +S
Sbjct: 470  RQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHS 529

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLV EG + F SM+ +Y   P  EHY+CMVD+LG+AG L  A +FI  MP +P   +WGA
Sbjct: 530  GLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGA 589

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+C IH + E A +AS+RLF+L+P N   Y L+ N+ +    +     +R  + +  +
Sbjct: 590  LLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKL 649

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT-RCVYQDID 996
                  + I+ID   +VF++    HP    I+  L  L  +M++ GY  +T      D++
Sbjct: 650  AKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVE 709

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            +EEK  ++  H+EKLAI +GL+ TK    IR+IKN RVC DCHTA K++S +  R I +R
Sbjct: 710  DEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVR 769

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFHHF+ G CSC D W
Sbjct: 770  DANRFHHFKNGICSCGDYW 788



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 236/540 (43%), Gaps = 53/540 (9%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y +F     A K F +   R    W++ +  + S     ++ + V+ ++   G+ F S  
Sbjct: 158 YFKFTRAELARKVFDVMPERDTVLWNTMISGF-SRNSYFEDSIRVFVDMLDVGLSFDSTT 216

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +L    +L  + LG+ +     K+G   DV++   L++ Y KC        LF ++ 
Sbjct: 217 LATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQI- 275

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D  D + +N +I     N + E+A+ LFRE+  S  +  S T+V ++            +
Sbjct: 276 DQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSR 335

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            I    LK  +    SV   L ++Y R N+++ A ++FD   + +L+SWN+MIS YT  G
Sbjct: 336 LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNG 395

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             D A SLF +M      P +                                PN  +V+
Sbjct: 396 LTDRAISLFQEM-----MPQL-------------------------------SPNPVTVT 419

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +L A  +L  L  G+  HG I    L+ ++YV T+L+DMY K   +  A+++FD M ++
Sbjct: 420 SILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDK 479

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           N+V WN++I+GY   G    A K+  +M +  I P  V++ S++   S  G   E   I 
Sbjct: 480 NVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIF 539

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
           H M N+ G  P    +  ++    +      +L+F  +M  E   P      +LL  C  
Sbjct: 540 HSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLE---PGPAVWGALLGAC-- 594

Query: 716 LGLLQNGKEIHCLCLKNGFIKDA-----YVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
             ++    E+  +  K  F  D      YV   L ++YS   N   A  V +    + LA
Sbjct: 595 --MIHKNTEMANVASKRLFQLDPENVGYYVL--LSNIYSTDRNFPKAASVRQVVKKRKLA 650



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 232/537 (43%), Gaps = 78/537 (14%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           +GV +HA  I  G   ++ +  A+++ Y K    E A K+F +V    D +LWN +I   
Sbjct: 131 VGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVF-DVMPERDTVLWNTMISGF 189

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            RN  +E++I++F +M        S T+  +L A A++  +  G  I     K  L S++
Sbjct: 190 SRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDV 249

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V   LIS+YS+  K      +FD +   +L S+N+MIS YT                  
Sbjct: 250 YVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYT------------------ 291

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                           F H + ++ +TL R + + G R N S++  ++        L+  
Sbjct: 292 ----------------FNHET-ESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS 334

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           R      L+ G+     V T+L  +Y + + +Q A+++FD    +++ +WN++ISGY   
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQN 394

Query: 612 GLFVNAKKMLNQM----------------------------------EEEEIKPDLVSWN 637
           GL   A  +  +M                                  + E ++ ++    
Sbjct: 395 GLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVST 454

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           +LV  Y+  G   EA  +   M +     NVVTW ++I+G   + + +E+LK F +M Q 
Sbjct: 455 ALVDMYAKCGSIVEARQLFDLMVDK----NVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            I P   T  S+L  C   GL+  G EI H +    GF   +     ++D+  ++G L +
Sbjct: 511 GIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTN 570

Query: 757 ARE-VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           A E + R       A W  ++    I+ N + A +    L +    P+ + +  LL+
Sbjct: 571 ALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQ--LDPENVGYYVLLS 625


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 251/861 (29%), Positives = 416/861 (48%), Gaps = 104/861 (12%)

Query: 294  SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
            ++ L   L+ C    A      +H  L+  G    V L+  L++ Y  C  +  A +L  
Sbjct: 20   TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLR 79

Query: 354  EVSDLEDDLLWNEIIMVK--LRNEKWENAIKLFREM------QFSSAKAISRTIVKMLQA 405
              +D+++  +    IM+    +     +A +LF  M       +++  + +        +
Sbjct: 80   --ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMS 137

Query: 406  CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            C  +G      Q+ G   K     +  V   L+ M+ R   ++ A+R+F  ++   +   
Sbjct: 138  CGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCR 197

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            NSM++ Y  L  +D A   F  M     + D+++WN +++     G  +  L L+  M  
Sbjct: 198  NSMLAGYAKLYGIDHAIEYFEDM----AERDVVSWNMMIAALSQSGRVREALGLVVEMHR 253

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK------ 579
             G R + ++ +  L A   L  L +G++ H  ++R+    D YV ++L+++Y K      
Sbjct: 254  KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKE 313

Query: 580  -------------------------NDCLQNAQEVFDNMK-------------------- 594
                                      +C   + E+F+ M+                    
Sbjct: 314  AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 373

Query: 595  -------------------NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
                               NR IV  NSLIS Y   G   NA+ + + M E     D+VS
Sbjct: 374  RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER----DIVS 429

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM- 694
            W S+++ YS  G   +A      M       N +TW +++   +Q+    + LK +  M 
Sbjct: 430  WTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAML 485

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
             Q+D+ P+  T  +L + C  +G  + G +I    +K G I +  VA   I MYSK G +
Sbjct: 486  SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRI 545

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
              A+++F     K + SWN MI G++ +G GK+A   F ++L  G +PD I++ A+L+ C
Sbjct: 546  SEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGC 605

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
             +SGLV+EG  YFD M+  + I P +EH+SCMVDLLG+AG+L EA D I  MP KP A +
Sbjct: 606  SHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEV 665

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            WGALL +C+IHG+ E AE+A++ +F+L+  +S +Y L+  + + + + +D  ++R  M +
Sbjct: 666  WGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 725

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
             G+K    +SW++++  VHVF A+   HP    I  ++  L+ ++  LGYV         
Sbjct: 726  KGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV--------- 776

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
                E  +  + H+EKLA+ +G+M   +  PI ++KN R+C DCHT  K +S V  RE  
Sbjct: 777  --RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFV 834

Query: 1055 LRDGARFHHFREGECSCNDCW 1075
            +RDG RFHHF+ G CSC D W
Sbjct: 835  IRDGVRFHHFKSGSCSCGDYW 855



 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/543 (24%), Positives = 255/543 (46%), Gaps = 18/543 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S++  Y +      A + F     R    W+  +    S  G V+E L +  E+H KGV 
Sbjct: 199 SMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL-SQSGRVREALGLVVEMHRKGVR 257

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S   T  L  C +L +   G ++HA +I+     D ++  AL+  Y KC   + A ++
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+ + D  + + W  +I   L+ E +  +++LF +M+          +  ++  C     
Sbjct: 318 FNSLQD-RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMD 376

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G+Q+H   LKS     + V N LIS+Y++   L+ A  VF SM + ++ SW SMI++
Sbjct: 377 LCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITA 436

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRP 530
           Y+ +G +  A   F+ M +     + ITWN +L  +  HG+ ++ L +   M S     P
Sbjct: 437 YSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 492

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           +  +   + +   ++   K G +  G+ ++ GL  ++ V  + + MY K   +  AQ++F
Sbjct: 493 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 552

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
           D +  +++V+WN++I+GY   G+   A K  + M  +  KPD +S+ +++SG S  G  +
Sbjct: 553 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 612

Query: 651 EALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           E  +    M +  GI P +  ++ ++    +  +  E+     +M    +KP +    +L
Sbjct: 613 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP---MKPTAEVWGAL 669

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG---LIDMYSKSGNLKSAREVFRKSAN 766
           L  C     +    E+  L  K+ F  D+  +     L  +YS +G    + +V +   +
Sbjct: 670 LSACK----IHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 725

Query: 767 KTL 769
           K +
Sbjct: 726 KGI 728



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 123/541 (22%), Positives = 225/541 (41%), Gaps = 76/541 (14%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A+++ +   L++C   GA    + +HG ++   L S + + N L+  Y     L  A R+
Sbjct: 18  AVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRL 77

Query: 454 FDS-MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
             + +K+ N+ + N M++ Y   G +  A  LF++M     + D+ +WN L+S       
Sbjct: 78  LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSDT----- 128

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                           RP GS +S       EL       +  G   +     D  V T+
Sbjct: 129 ---------------SRPAGSWMSCGALGCREL-----APQLLGLFWKFDFWGDPDVETA 168

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+DM+V+   +  A  +F  ++   I   NS+++GY       +A +    M E     D
Sbjct: 169 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER----D 224

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           +VSWN +++  S  G+ +EAL ++  M   G                             
Sbjct: 225 VVSWNMMIAALSQSGRVREALGLVVEMHRKG----------------------------- 255

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
                 ++ +STT +S L  C  L  L  GK++H   +++    D YVA+ LI++Y+K G
Sbjct: 256 ------VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 309

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           + K A+ VF    ++   SW  +I G   Y    +++ LF+++       D      L++
Sbjct: 310 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 369

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            C N   +  G +   S+         I   + ++ L  K G L  A +F+ +   + D 
Sbjct: 370 GCFNRMDLCLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERDI 427

Query: 873 TIWGALLGSCRIHGHLEYAEIASRRLFK-LEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
             W +++ +    G++    I +R  F  +   N+  +N M+         ED  ++  +
Sbjct: 428 VSWTSMITAYSQIGNI----IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSA 483

Query: 932 M 932
           M
Sbjct: 484 M 484


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/643 (32%), Positives = 342/643 (53%), Gaps = 49/643 (7%)

Query: 482  WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV---- 537
            WS+     ++   P   +W   +    + G + + + L   M++       SSV      
Sbjct: 4    WSIAAAAAAAPFPPLPPSWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPG 63

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC--------------L 583
             L++   L L   G   H   LR+G   D +   +L+++Y K                 L
Sbjct: 64   ALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVL 123

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            ++ ++VFD M  +++V+WN+L+ G    G    A  ++ +M  +  KPD  + +S++  +
Sbjct: 124  ESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIF 183

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNV-------------------------------VTWT 672
            +     +  + +      +G + +V                               + W 
Sbjct: 184  AEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWN 243

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            S+++G  QN +  E+L  F +M    IKP   T SSL+  CG L  L  GK++H   ++ 
Sbjct: 244  SMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRG 303

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF  + ++++ LIDMY K GN+  AR +F +  +  + SW  MIMG A++G  +EA++LF
Sbjct: 304  GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLF 363

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
              +     +P+ ITF A+L AC ++GLV++GWKYF+SMS  Y I+P++EH++ + D LG+
Sbjct: 364  DRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGR 423

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
             G L+EA++FI  M  KP A++W  LL +C++H +   AE  ++++F LEP +  ++ ++
Sbjct: 424  PGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIIL 483

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N  + S RW +   LR SM + G++     SWI++    HVF A    HP    I   L
Sbjct: 484  SNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDAL 543

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
                 +M + GYVP+T  V+QDI+EE+K  VL  H+EKLAIV+G++ T     IRV+KN 
Sbjct: 544  NVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNL 603

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCHT  K++S + GREI +RD  RFHHF++G CSC D W
Sbjct: 604  RVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 195/428 (45%), Gaps = 54/428 (12%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY--------------GKCRDVE 346
           LK C  L    LG  +HA  ++ G   D     AL+N Y              G    +E
Sbjct: 65  LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
           S  K+F E+ + +D + WN +++    + +   A+ L REM     K  S T+  +L   
Sbjct: 125 SVRKVFDEMPE-KDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIF 183

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           A+      G ++HG+  ++    ++ V + LI MY+   + + + +VFD++   +   WN
Sbjct: 184 AEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWN 243

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           SM++     G VD A  LF +M  S I+P  +T++ L                       
Sbjct: 244 SMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSL----------------------- 280

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
                       + A   L  L  G++ H Y++R G D ++++ +SL+DMY K   +  A
Sbjct: 281 ------------IPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIA 328

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           + +FD +++ +IV+W ++I G+   G    A  + ++ME   +KP+ +++ ++++  S  
Sbjct: 329 RRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHA 388

Query: 647 GQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
           G   +     + M +  GI P++    +L     +     E+  F   M+   IKP ++ 
Sbjct: 389 GLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMK---IKPTASV 445

Query: 706 MSSLLQTC 713
            S+LL+ C
Sbjct: 446 WSTLLRAC 453



 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 198/465 (42%), Gaps = 72/465 (15%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK----MLQACAKVGAFHEGKQIH 419
           W   I V      + +AI LF  M+ S   A   +++      L++CA +G    G  +H
Sbjct: 22  WAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLH 81

Query: 420 GYVLKSALESNLSVCNCLISMY-------SRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
              L+S   ++    N L+++Y       S + +++ +  V +S++              
Sbjct: 82  ALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVR-------------- 127

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                      +F++M     + D+++WN L+ G    G +   L L+R M   G +P+ 
Sbjct: 128 ----------KVFDEMP----EKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDS 173

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            ++S VL    E   ++ G E HG+  RNG   D++VG+SL+DMY        + +VFDN
Sbjct: 174 FTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDN 233

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----IWG 647
           +  R+ + WNS+++G    G    A  +  +M    IKP  V+++SL+         + G
Sbjct: 234 LPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLG 293

Query: 648 QSKEALVI--------------------------IHHMKNSGIYPNVVTWTSLISGSLQN 681
           +   A VI                             + +    P++V+WT++I G   +
Sbjct: 294 KQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALH 353

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYV 740
              RE+L  F +M+  ++KPN  T  ++L  C   GL+  G K  + +    G +     
Sbjct: 354 GPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEH 413

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN 784
              L D   + G L+ A         K  AS W+ ++    ++ N
Sbjct: 414 HAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKN 458



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 117/234 (50%), Gaps = 1/234 (0%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G   E L +  E+   G    S  L+ +L +  +      G+E+H    + GF  DV + 
Sbjct: 152 GRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVG 211

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L++ Y  C   + + K+F  +  + D +LWN ++    +N   + A+ LFR M  S  
Sbjct: 212 SSLIDMYANCTRTDYSVKVFDNLP-VRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGI 270

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           K +  T   ++ AC  + +   GKQ+H YV++   + N+ + + LI MY +   + +A R
Sbjct: 271 KPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARR 330

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +FD ++  ++ SW +MI  +   G    A  LF++M    ++P+ IT+  +L+ 
Sbjct: 331 IFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTA 384



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 12/217 (5%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S L       G V E L ++  +   G+       + ++  C  L +  LG ++HA +
Sbjct: 242 WNSMLAGCAQ-NGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV 300

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           I+ GFD +V +  +L++ Y KC +V  A ++F  +    D + W  +IM    +     A
Sbjct: 301 IRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQS-PDIVSWTAMIMGHALHGPAREA 359

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG-----YVLKSALESNLSVCN 435
           + LF  M+  + K    T + +L AC+  G   +G +        Y +  +LE + ++ +
Sbjct: 360 LVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALAD 419

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSS-WNSMISS 471
            L     R  KLE A      MK    +S W++++ +
Sbjct: 420 TL----GRPGKLEEAYNFISGMKIKPTASVWSTLLRA 452


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/645 (30%), Positives = 358/645 (55%), Gaps = 46/645 (7%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            +I + +  G +  A  +F+ +     +P +  WN ++ G+  +  +Q+ L +   MQ   
Sbjct: 59   LIHASSSYGDITFARQVFDDLP----RPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLAR 114

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P+  +   +L+A   L  L+ GR  H  + R G + D++V   L+ +Y K   L  A+
Sbjct: 115  VSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCAR 174

Query: 588  EVFDNMK--NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--- 642
             VF+ +    R IV+W +++S Y   G  V A ++ +QM + ++KPD V+  S+++    
Sbjct: 175  TVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTC 234

Query: 643  --------------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                                            Y+  GQ   A ++   MK+    PN++ 
Sbjct: 235  LQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLIL 290

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W ++ISG  +N   ++++  F +M  +D++P++ +++S +  C  +G L+  + +     
Sbjct: 291  WNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVS 350

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            ++ +  D ++++ LIDM++K G+++ AR VF ++ ++ +  W+ MI+G+ ++G  +EAI 
Sbjct: 351  RSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAIS 410

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            L+  +   G  P+ +TF  LL AC +SG+V EGW +F+ M+ D+ I P  +HY+C++DLL
Sbjct: 411  LYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLL 469

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG+LD+A++ I+ MP +P  T+WGALL +C+ H H+E  + A+++LF ++P N+ +Y 
Sbjct: 470  GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYV 529

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
             + NL A +  W+ V  +R  M E G+   +  SW+++   +  F      HP   EI  
Sbjct: 530  QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIER 589

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            ++  + S +K+ G+V +      D+++EE  + L SH+E++ I YGL+ T     +R+ K
Sbjct: 590  QVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITK 649

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R C +CH A K +S + GREI +RD  RFHHF++G CSC D W
Sbjct: 650  NLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 239/540 (44%), Gaps = 52/540 (9%)

Query: 186 AQLSCISSGFCFLN---ETNKFRC--------LSSVKSKHAQMIKMGKIWNSDDMVKSLI 234
           ++ SC++S F + N    ++ F           + ++  HA+++ +G +  S  ++  LI
Sbjct: 2   SEASCLASPFLYTNSGIHSDSFYASLIDSSTHKAQLRQIHARLLVLG-LQFSGFLITKLI 60

Query: 235 FHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRS 294
                +GD T A + F          W++ +  Y S     Q+ L ++ ++    V   S
Sbjct: 61  HASSSYGDITFARQVFDDLPRPQVFPWNAIIRGY-SRNNHFQDALLMYSKMQLARVSPDS 119

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
                +LK C  L    +G  VHA + + GF+ DV ++  L+  Y KCR +  A  +F  
Sbjct: 120 FTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEG 179

Query: 355 VSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           +   E  ++ W  I+    +N +   A+++F +M+    K     +V +L A   +    
Sbjct: 180 LPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLE 239

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           +G+ IH  V+K  LE+   +   L +MY++  ++  A  +FD MK  NL  WN+MIS Y 
Sbjct: 240 QGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G+   A  LF++M +  ++PD I                                   
Sbjct: 300 KNGFAKDAIDLFHEMINKDVRPDTI----------------------------------- 324

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           S++  + A  ++  L+  R    Y+ R+    D+++ ++L+DM+ K   ++ A+ VFD  
Sbjct: 325 SITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRT 384

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
            +R++V W+++I GY   G    A  +   ME + + P+ V++  L+   +  G  +E  
Sbjct: 385 LDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGW 444

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
              + M +  I P    +  +I    +  +  ++ +    M    ++P  T   +LL  C
Sbjct: 445 WFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSAC 501


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein At3g03580-like
            [Cucumis sativus]
          Length = 939

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/764 (29%), Positives = 395/764 (51%), Gaps = 77/764 (10%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            ++  C +++   LG  VH   ++ GF+ D+++  AL++ Y +  D+++A  +F E+S+  
Sbjct: 127  VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN-R 185

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D + WN +I     N  WE+A+ ++ + + +       T+  +L AC  + A  EG  +H
Sbjct: 186  DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVH 245

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G + K  +  ++ + N L+SMY +  +L  A RVF  M                      
Sbjct: 246  GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMA--------------------- 284

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            D +TWN ++ G+   G ++  + L   M   GF P+  S++  +
Sbjct: 285  --------------VKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            +A  +   L+ G+  H Y++ +G + D      L+DMY K   L  AQEVFD  K ++ V
Sbjct: 330  RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----------------------- 636
             WNSLI+GY   G +    +    M+ E  KPD V++                       
Sbjct: 390  TWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDV 448

Query: 637  ------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                        NSL+  Y+  G+  + L +  +M       ++++W ++I+ S+  ++ 
Sbjct: 449  IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH----DIISWNTVIASSVHFDDC 504

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
                +   +M+ E + P+  T+  +L  C  L + + GKEIH    K+GF  +  +   L
Sbjct: 505  TVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNAL 564

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            I+MYSK G+L++  +VF+    K + +W  +I  F +YG GK+A+  F ++  +G  PD+
Sbjct: 565  IEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDS 624

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            + F A + AC +SG+V+EG ++FD M TDYN+ P +EHY+C+VDLL ++G L +A +FI 
Sbjct: 625  VAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFIL 684

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            +MP KPDA++WGALL +CR  G+   A+  S+++ +L   ++  Y L+ N+ A   +W+ 
Sbjct: 685  SMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQ 744

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V+ +R+SM   G+K     SWI+I + V+VF           ++   L +LV  M K GY
Sbjct: 745  VKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGY 804

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            V D +    D++E++K  +L  H+E+LAI +GL+ TK  +P+ +
Sbjct: 805  VADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLI 848



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/608 (24%), Positives = 256/608 (42%), Gaps = 80/608 (13%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VH+ +I  G    V     L++ Y + +D  S+  +F  +S   +  LWN II     N 
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +  A+  + EM+    +  + T   ++ +CA++     G  +H + ++   ES+L + N
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            LI MYSR   L+ A  VF+ M + +  SWNS+IS Y   G+ + A  +++K   + + P
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D  T                                   +S VL A   L  +K G   H
Sbjct: 221 DCFT-----------------------------------MSSVLLACGSLMAVKEGVAVH 245

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
           G I + G+  D+ +G  L+ MY K + L+ A+ VF  M  ++ V WN++I GY   G   
Sbjct: 246 GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHE 305

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV------- 668
            + K+   M +  + PD++S  S +      G  +    +  ++  SG   +        
Sbjct: 306 ASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILI 364

Query: 669 ------------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                   VTW SLI+G  Q+  Y+E L+ F  M+ E  KP+S 
Sbjct: 365 DMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSV 423

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T   LL     L  +  G+ IHC  +K GF  +  +   L+D+Y+K G +    +VF   
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC-----KNSGL 819
           +   + SWN +I     + +      + +E+   G  PD  T   +L  C     +  G 
Sbjct: 484 SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
              G+ +     ++  I       + ++++  K G L+      + M  K D   W AL+
Sbjct: 544 EIHGYIFKSGFESNVPI------GNALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALI 596

Query: 880 GSCRIHGH 887
            +  ++G 
Sbjct: 597 SAFGMYGE 604



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 152/623 (24%), Positives = 268/623 (43%), Gaps = 85/623 (13%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H   ++MG  + SD  +  +LI  Y  F D  +A   F    +R    W+S +  Y S  
Sbjct: 144 HEHAMEMG--FESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCS-N 200

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  ++ L+++ +    G++     ++ +L  C  LMA   GV VH  + K G   DV + 
Sbjct: 201 GFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIG 260

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L++ Y K   +  A ++FS+++ ++D + WN +I    +  + E ++KLF +M     
Sbjct: 261 NGLLSMYFKFERLREARRVFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV 319

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
             +  +I   ++AC + G    GK +H Y++ S  E +   CN LI MY++   L  A  
Sbjct: 320 PDM-LSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQE 378

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VFD+ K  +  +WNS+I+ YT  GY       F  M   R +PD +T+  LLS       
Sbjct: 379 VFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLS------- 430

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                         ++L  +  GR  H  +++ G + +L +G S
Sbjct: 431 ----------------------------IFSQLADINQGRGIHCDVIKFGFEAELIIGNS 462

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+D+Y K   + +  +VF  M   +I++WN++I+            +M+N+M  E + PD
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPD 522

Query: 633 LVS-----------------------------------WNSLVSGYSIWGQSKEALVIIH 657
             +                                    N+L+  YS  G  +  + +  
Sbjct: 523 EATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFK 582

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
           +MK      +VVTWT+LIS        +++LK F  M+   + P+S    + +  C   G
Sbjct: 583 YMKEK----DVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSG 638

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNC 774
           +++ G       +K  +  +  +     ++D+ ++SG L  A E       K  AS W  
Sbjct: 639 MVKEGLRFFDR-MKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGA 697

Query: 775 MIMGFAIYGNGKEAILLFHELLE 797
           ++      GN   A  +  ++LE
Sbjct: 698 LLSACRARGNTNIAQRVSKKILE 720



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/331 (21%), Positives = 146/331 (44%), Gaps = 10/331 (3%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  +IK G  + ++ ++  SL+  Y + G+     K F    +     W++ +     F 
Sbjct: 445 HCDVIKFG--FEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFD 502

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            +     ++  E+  +G++     +  IL +C+ L     G E+H  + K GF+ +V + 
Sbjct: 503 -DCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIG 561

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  Y KC  +E+  K+F  + + +D + W  +I       + + A+K F++M+ S  
Sbjct: 562 NALIEMYSKCGSLENCIKVFKYMKE-KDVVTWTALISAFGMYGEGKKALKAFQDMELSGV 620

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELAT 451
              S   +  + AC+  G   EG +    +     LE  +    C++ + +R+  L  A 
Sbjct: 621 LPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAE 680

Query: 452 RVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-T 509
               SM    + S W +++S+    G  ++A  +  K+    +  D   +  L+S  + T
Sbjct: 681 EFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKI--LELNSDDTGYYVLVSNIYAT 738

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            G +  V T+   M++ G +    S  + +Q
Sbjct: 739 LGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQ 769



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 1/109 (0%)

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SA 765
           SSLL+T          + +H L + +G       +  LI  Y++  +  S+  VFR  S 
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
              +  WN +I      G   +A+  + E+ E   QPDA TF +++ +C
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSC 131


>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/578 (35%), Positives = 321/578 (55%), Gaps = 65/578 (11%)

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
            WN +++ +      +N L +   ++ + F  +      VL+A  ++   + G+E HG++L
Sbjct: 127  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW----NSLISGYCFKGLFV 615
            + GLD D++VG +LM MY +  C++ A+ VFD M  R++V+W     +L+  Y   G   
Sbjct: 187  KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
             A+++ N + ++                                        VV+WT++I
Sbjct: 247  LARQLFNGLTQK---------------------------------------TVVSWTAMI 267

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            +G +++    E  K FI+MQ+E+I PN  TM              N + +   C+ N   
Sbjct: 268  AGCIRSNRLEEGTKLFIRMQEENIFPNEITM-------------LNKERVEVDCILN--- 311

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
                  T L+DMY+K G++ +A  +F ++ ++ +  WN +I GFA++G G+EA+ +F E+
Sbjct: 312  ------TALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 365

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
               G +P+ ITF  LL AC ++GLV EG K F+ M   + ++P IEHY CMVDLLG+AG 
Sbjct: 366  ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 425

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            LDEA + I++MP KP+  +WGAL+ +CR+H + +  E+A+ +L ++EP N     LM N+
Sbjct: 426  LDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNI 485

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A +NRW D   +R +M  VG+K     S I+++  VH F      HP    I   L  +
Sbjct: 486  YAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 545

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
              ++ + GYVPDT  V  +IDEEEK   L  H+EKLA+ +GL+ T    PIR++KN RVC
Sbjct: 546  RRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVC 605

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            +DCH A K +S + GR I +RD  RFHHFREG CSC D
Sbjct: 606  NDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGD 643



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 165/370 (44%), Gaps = 48/370 (12%)

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLF---REMQFSSAKAISRTIVKMLQACAKVGAF 412
           S L     WN +I    +  +  NA+ ++   R+M F     ++ +++K   AC +V   
Sbjct: 119 SGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLK---ACGQVSWT 175

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW----NSM 468
             GK+IHG+VLK  L+ ++ V N L+ MY     +E A  VFD M + ++ SW     ++
Sbjct: 176 QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTAL 235

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           +  Y   G++ +A  LFN +     Q  +++W  +++G       +    L   MQ    
Sbjct: 236 LDMYAKCGHLGLARQLFNGLT----QKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENI 291

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            PN            E+ +L   R          ++ D  + T+L+DMY K   +  A  
Sbjct: 292 FPN------------EITMLNKER----------VEVDCILNTALVDMYAKCGDINAAGR 329

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           +F    +R+I  WN++I+G+   G    A  +  +ME + +KP+ +++  L+   S  G 
Sbjct: 330 LFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGL 389

Query: 649 SKEALVIIHHMKNS-GIYPNVVTWTSLIS----GSLQNENYRESLKFFIQMQQEDIKPNS 703
             E   +   M ++ G+ P +  +  ++       L +E +         ++   IKPN+
Sbjct: 390 VTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHE-------MIKSMPIKPNT 442

Query: 704 TTMSSLLQTC 713
               +L+  C
Sbjct: 443 IVWGALVAAC 452



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 119/536 (22%), Positives = 210/536 (39%), Gaps = 110/536 (20%)

Query: 154 SINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSK 213
           +I Q +H H  +++  +PT L  PPT     Q  LS                 L   K  
Sbjct: 57  TIQQLQH-HPHSTLKFNPTPLQTPPTS--PSQHDLST----------------LEQTKQI 97

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHY---LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           HA +IK               FH+   +   DF S             A W+  +  Y  
Sbjct: 98  HAHIIKTH-------------FHHALQIPLNDFPSGLS--------PSAQWNFVITSYTK 136

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
              + +  L V+ +L        + +   +LK C ++    LG E+H  ++K+G D DV 
Sbjct: 137 -RNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVF 195

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  ALM  YG+C  VE A  +F ++  +E D++             W             
Sbjct: 196 VGNALMLMYGECACVEYARLVFDKM--MERDVV------------SW------------- 228

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                  T   +L   AK G     +Q+ +G   K+ +     +  C+     R+N+LE 
Sbjct: 229 -----IPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI-----RSNRLEE 278

Query: 450 ATRVFDSMKDHNLSS-----------------WNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            T++F  M++ N+                     +++  Y   G ++ A  LF +     
Sbjct: 279 GTKLFIRMQEENIFPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA---- 334

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           I  DI  WN +++G   HG  +  L +   M+  G +PN  +   +L A +   L+  G+
Sbjct: 335 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 394

Query: 553 ESHGYILRN-GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCF 610
           +    ++   GL   +     ++D+  +   L  A E+  +M  + N + W +L++  C 
Sbjct: 395 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA-C- 452

Query: 611 KGLFVNAK-KMLNQMEEEEIKPDLVSWNSLVSG-YSIWGQSKEALVIIHHMKNSGI 664
             L  N +   L   +  EI+P+   +N L+S  Y+   +  +A  +   MK  G+
Sbjct: 453 -RLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGM 507


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 685

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/612 (34%), Positives = 336/612 (54%), Gaps = 31/612 (5%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P+I  +N L++G   +  +   L L   ++  G   +G +  +VL+A T     K G + 
Sbjct: 74   PNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDL 133

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H  +++ G ++D+   TSL+ +Y  +  L +A +VF+ +  R++V W +L SGY   G  
Sbjct: 134  HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKH 193

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM------KNSGIYP-- 666
              A  +  +M E  ++PD      ++S     G       I+ HM      KNS +    
Sbjct: 194  REAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTL 253

Query: 667  -----------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
                                   ++VTW+++I G   N   +E ++FF+QM QE++KP+ 
Sbjct: 254  VNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQ 313

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             ++   L +C  LG L  G+    L  ++ F+ + ++A  LIDMY+K G +    EVF++
Sbjct: 314  FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               K +   N  I G A  G+ K +  +F +  + G  PD  TF  LL  C ++GL+++G
Sbjct: 374  MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             ++F+++S  Y +  T+EHY CMVDL G+AG LD+A+  I  MP +P+A +WGALL  CR
Sbjct: 434  LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +    + AE   + L  LEP N+ NY  + N+ ++S RW++   +R  M+  G+K +  +
Sbjct: 494  LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGY 553

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            SWI+++  VH F A+   HP + +IY +L  L +EM+ +G+VP T  V+ D+++EEK +V
Sbjct: 554  SWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERV 613

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLA+ +GL+ T     IRV+KN RVC DCH   K +S +  REI +RD  RFH 
Sbjct: 614  LGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHC 673

Query: 1064 FREGECSCNDCW 1075
            F  G CSCND W
Sbjct: 674  FTNGSCSCNDYW 685



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 162/367 (44%), Gaps = 36/367 (9%)

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
            E L+++  +   G+        ++LK CT+     LG+++H+ ++K GF+ DV    +L
Sbjct: 93  HETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSL 152

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
           ++ Y     +  A+K+F E+ +    + W  +        K   AI LF++M     +  
Sbjct: 153 LSIYSGSGRLNDAHKVFEEIPE-RSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPD 211

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           S  IV++L AC  VG    G+ I  ++ +  ++ N  V   L+++Y++  K+E A  VFD
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
           SM + ++ +W++MI  Y    +       F +M    ++PD  +                
Sbjct: 272 SMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFS---------------- 315

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
           ++  L    SLG                    L  G      I R+    +L++  +L+D
Sbjct: 316 IVGFLSSCASLG-------------------ALDLGEWGISLIDRHEFLTNLFMANALID 356

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           MY K   +    EVF  MK ++IV  N+ ISG    G    +  +  Q E+  I PD  +
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416

Query: 636 WNSLVSG 642
           +  L+ G
Sbjct: 417 FLGLLCG 423



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/523 (21%), Positives = 208/523 (39%), Gaps = 85/523 (16%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           +VH SLI      D  L   L+      R    +  LFS  +   +  L+N +I   + N
Sbjct: 31  QVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSH-TQFPNIFLYNTLINGFVNN 89

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             +   + LF  ++         T   +L+AC +      G  +H  V+K          
Sbjct: 90  HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGF------- 142

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
                                   +H++++  S++S Y+G G ++ A  +F ++     +
Sbjct: 143 ------------------------NHDVAAMTSLLSIYSGSGRLNDAHKVFEEIP----E 174

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             ++TW  L SG+ T G ++  + L + M  +G RP+   +  VL A   +  L  G   
Sbjct: 175 RSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWI 234

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
             ++    +  + +V T+L+++Y K   ++ A+ VFD+M  ++IV W+++I GY      
Sbjct: 235 VKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFP 294

Query: 615 VNAKKMLNQMEEEEIKP------------------DLVSW-----------------NSL 639
               +   QM +E +KP                  DL  W                 N+L
Sbjct: 295 KEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           +  Y+  G       +   MK      ++V   + ISG  +N + + S   F Q ++  I
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410

Query: 700 KPNSTTMSSLLQTCGGLGLLQNG----KEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNL 754
            P+ +T   LL  C   GL+Q+G      I C+      +K      G ++D++ ++G L
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYA----LKRTVEHYGCMVDLWGRAGML 466

Query: 755 KSA-REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
             A R +           W  ++ G  +  + + A  +  EL+
Sbjct: 467 DDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 8/218 (3%)

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
           +PN+  + +LI+G + N  + E+L  F+ +++  +  +  T   +L+ C      + G +
Sbjct: 73  FPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGID 132

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
           +H L +K GF  D    T L+ +YS SG L  A +VF +   +++ +W  +  G+   G 
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGK 192

Query: 785 GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-W--KYFDSMSTDYNIIPTIE 841
            +EAI LF +++E G +PD+     +L+AC + G ++ G W  K+ + M    N      
Sbjct: 193 HREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVR-- 250

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
             + +V+L  K G +++A     +M  K D   W  ++
Sbjct: 251 --TTLVNLYAKCGKMEKARSVFDSMGEK-DIVTWSTMI 285



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 194/458 (42%), Gaps = 51/458 (11%)

Query: 214 HAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H+ ++K G  +N D   + SL+  Y   G    A K F     RS   W++    Y +  
Sbjct: 134 HSLVVKCG--FNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTT-A 190

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+ +E ++++ ++   GV   S  +  +L  C  +     G  +   + +     +  ++
Sbjct: 191 GKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVR 250

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L+N Y KC  +E A  +F  + + +D + W+ +I     N   +  I+ F +M   + 
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMGE-KDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENL 309

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           K    +IV  L +CA +GA   G+     + +    +NL + N LI MY++   +     
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VF  MK+ ++   N+ IS     G+V +++++F +     I PD  T+  LL G    G 
Sbjct: 370 VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            Q+           G R           A++ +  LK   E +G                
Sbjct: 430 IQD-----------GLR--------FFNAISCVYALKRTVEHYG---------------C 455

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           ++D++ +   L +A  +  +M  R N + W +L+SG C     V   ++   + +E I  
Sbjct: 456 MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG-C---RLVKDTQLAETVLKELIA- 510

Query: 632 DLVSWNS-----LVSGYSIWGQSKEALVIIHHMKNSGI 664
            L  WN+     L + YS+ G+  EA  +   M   G+
Sbjct: 511 -LEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGM 547


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Brachypodium distachyon]
          Length = 695

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/719 (31%), Positives = 372/719 (51%), Gaps = 75/719 (10%)

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHG-YVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            A S  +   LQ+C + G    G+ +H   VL  A  ++  + N LI+MYS    +  A R
Sbjct: 15   ATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVR 74

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            +FD+M                                    +P++++W  L+SG   +  
Sbjct: 75   LFDAMP-----------------------------------RPNLVSWTTLVSGLTQNSM 99

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            +++ L     M   G  P   ++S   +A   L     G + H   +R G D +L+V ++
Sbjct: 100  HRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASN 159

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI--- 629
            L DMY K+  L  A  VFD M  ++ VAW ++I GY   G    A      M  E +   
Sbjct: 160  LADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGA 219

Query: 630  ---------------------------------KPDLVSWNSLVSGYSIWGQSKEALVII 656
                                             + ++   N+L   Y+       A  ++
Sbjct: 220  DQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVV 279

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
               + S    NVV+ TSLI G ++ +   ++L  FI+++++ ++PN  T SS+++ C   
Sbjct: 280  KIDQGS---LNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQ 336

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
             LL+ G ++H   +K   I D++V++ L+DMY K G +  + ++F++    T  +WN  I
Sbjct: 337  ALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAI 396

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
               A +G+G+EAI  F  +  +G +P+ ITF +LL AC ++GLV+EG KYF SM   + I
Sbjct: 397  NVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGI 456

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P  EHYSC++D+ G+AG LDEA  FI  MP KP+A  W +LLG+CR+ G+ E  EIA+ 
Sbjct: 457  EPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAAD 516

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             + KLEP N+  +  +  + A   +WEDV+ +R  M +  +K +  +SW+  ++  HVF 
Sbjct: 517  NMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFG 576

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            +E   HP   +IY +L  L   +K+ GYVPDTR +  ++++  K ++L  H+E++A+ + 
Sbjct: 577  SEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFA 636

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+   +  PI V KN R+C+DCH+A K++S V  R+I +RD +RFHHF +G CSC D W
Sbjct: 637  LISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 133/621 (21%), Positives = 256/621 (41%), Gaps = 72/621 (11%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           RCL      HA+++  G    S  +   LI  Y    D  SA + F      +   W++ 
Sbjct: 37  RCL------HARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTL 90

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +          ++ L  +  +   G++     L+   +    L A   G ++H   ++ G
Sbjct: 91  VSGLTQNSMH-RDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLG 149

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           FD ++ +   L + Y K   +  A ++F ++   +D + W  +I    +N   E A+  F
Sbjct: 150 FDAELFVASNLADMYSKSGLLVEACRVFDQMPQ-KDAVAWTAMIDGYAKNGNLEAAVIAF 208

Query: 385 REMQFSS-AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           R+M+      A    +  +L A   +      + IH  V+KS  E  ++V N L  MY++
Sbjct: 209 RDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAK 268

Query: 444 NNKLELATRVFD-SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
              ++ A RV        N+ S  S+I  Y     ++ A  +F ++    ++P+  T++ 
Sbjct: 269 AADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSS 328

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++ G                                +QA     LL+ G + H  +++  
Sbjct: 329 MIKG------------------------------CAMQA-----LLEQGAQLHAEVIKTS 353

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           L  D +V ++L+DMY K   +  + ++F  ++    +AWN+ I+     G    A +  +
Sbjct: 354 LISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFD 413

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQN 681
           +M    I+P+ +++ SL++  S  G   E L   + MK+  GI P    ++ +I    + 
Sbjct: 414 RMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRA 473

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF---IKDA 738
               E+ KF  +M    +KPN+    SLL  C     ++  KE+  +   N       + 
Sbjct: 474 GRLDEAEKFIGEMP---VKPNAYGWCSLLGAC----RMRGNKELGEIAADNMMKLEPDNT 526

Query: 739 YVATGLIDMYSKSG---NLKSAREVFRKSANKTLA--SW-----NCMIMGFAIYGNGKEA 788
            V   L  +Y+  G   ++K+ R++ R +  K L   SW        + G   + + ++ 
Sbjct: 527 GVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQE 586

Query: 789 IL------LFHELLETGFQPD 803
            +      L+  + E G+ PD
Sbjct: 587 KIYEKLEELYERIKEEGYVPD 607



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 122/525 (23%), Positives = 207/525 (39%), Gaps = 69/525 (13%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVESANKLFSEV 355
           L   L+ C +     LG  +HA L+  G       L   L+  Y  C DV SA +LF  +
Sbjct: 20  LAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAM 79

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
               + + W  ++    +N    +A+  F  M  +        +    +A A + A H G
Sbjct: 80  PR-PNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAG 138

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            Q+H   ++   ++ L V + L  MYS++  L  A RVFD M   +  +W +MI  Y   
Sbjct: 139 AQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKN 198

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G ++ A   F  M    +                 G+ Q+VL                  
Sbjct: 199 GNLEAAVIAFRDMRREGLV----------------GADQHVLC----------------- 225

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD-NMK 594
             VL A   L+     R  H  ++++G + ++ V  +L DMY K   + NA  V   +  
Sbjct: 226 -SVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQG 284

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQS 649
           + N+V+  SLI GY        A  M  ++  + ++P+  +++S++ G ++      G  
Sbjct: 285 SLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQ 344

Query: 650 KEALVIIHHMKNSGI--------------------------YPNVVTWTSLISGSLQNEN 683
             A VI   + +                             Y   + W + I+   Q+ +
Sbjct: 345 LHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGH 404

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVAT 742
            RE+++ F +M    I+PN  T  SLL  C   GL+  G K  + +   +G        +
Sbjct: 405 GREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYS 464

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            +IDMY ++G L  A +   +   K  A   C ++G       KE
Sbjct: 465 CIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKE 509


>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
          Length = 575

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/554 (36%), Positives = 323/554 (58%), Gaps = 17/554 (3%)

Query: 531  NGSSVSVVLQA-------VTELRLLKYGRES-HGYILRNGLDY-DLYVGTSLMDMYVKND 581
            N  S+S+ +QA       V  +R L  G  S H   L++G    DL+V T+L++ Y K  
Sbjct: 30   NSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSGFAAADLFVRTALVEAYAKAG 89

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
                A+  FD    R++   N +++ Y  +G    A+++ + M E     D+VSWN+++ 
Sbjct: 90   RADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRER----DMVSWNTMIH 145

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            GY++ G+   A  + + M +   +    +W+S++S   +    +++L+ + +M+   + P
Sbjct: 146  GYAVNGEVDLAREVFNGMDDRDAF----SWSSMMSAYTKGRRSKDALELWREMRAACVNP 201

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            + TTM S+L  C  +G L  G E+H     NG   D  + T LIDMY+K G+++++  VF
Sbjct: 202  DCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVF 261

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                 K + +W+ MI+G A +G G +A+ LF  +L  G QP+ +TF  +L +C + GLV 
Sbjct: 262  HSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVS 321

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G KYF SMS  + + P ++HY CMVDLLG++G+++EA   IR MPF+PDA IW ALLG+
Sbjct: 322  DGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGA 381

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CRI+ ++E AE A  +L  L+P    +Y L+ N+ A +N WE V  +R ++    ++ + 
Sbjct: 382  CRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIP 441

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              S I+    +H F +    HP + EIY  L  ++  +++ GY P T  V QDIDE+ K 
Sbjct: 442  GRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKE 501

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            + L  H+EKLA+ +GL+ T + + +R+ KN R C DCH+A K ++L+  R++ +RD  RF
Sbjct: 502  RALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRF 561

Query: 1062 HHFREGECSCNDCW 1075
            HHF EG CSC D W
Sbjct: 562  HHFSEGRCSCKDYW 575



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 167/331 (50%), Gaps = 24/331 (7%)

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
           F++A    RT   +++A AK G     +         A   ++ +CN +++ Y    ++ 
Sbjct: 70  FAAADLFVRT--ALVEAYAKAGRADLARA----AFDEAPRRDVFLCNVMLAAYVTRGEVA 123

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A RVFD M++ ++ SWN+MI  Y   G VD+A  +FN M+      D  +W+ ++S + 
Sbjct: 124 EARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDR----DAFSWSSMMSAYT 179

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                ++ L L R M++    P+ +++  VL A +++  L  G E H ++  NG++ D+ 
Sbjct: 180 KGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVK 239

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           +GT+L+DMY K   ++N+  VF +M  ++++ W+S+I G    G   +A  + ++M  E 
Sbjct: 240 LGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEG 299

Query: 629 IKPDLVSWNSLVSGYSIWGQSKE------ALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
           ++P+ V++  ++   +  G   +      ++ ++H     G+ P V  +  ++    ++ 
Sbjct: 300 LQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVH-----GVTPKVQHYGCMVDLLGRSG 354

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +  E+ +    M  E   P++    +LL  C
Sbjct: 355 HIEEAKQLIRDMPFE---PDAVIWRALLGAC 382



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 95/166 (57%), Gaps = 1/166 (0%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           +++ Y    +V+ A ++F+ + D  D   W+ ++    +  + ++A++L+REM+ +    
Sbjct: 143 MIHGYAVNGEVDLAREVFNGMDD-RDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNP 201

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T+V +L AC+ +GA   G ++H +V  + +E ++ +   LI MY++   +E + RVF
Sbjct: 202 DCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVF 261

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
            SM   ++ +W+SMI      G+   A SLF++M S  +QP+ +T+
Sbjct: 262 HSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTF 307



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 21/308 (6%)

Query: 228 DMVK--SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL 285
           DMV   ++I  Y   G+   A + F     R    WSS +  Y + G   ++ LE+W E+
Sbjct: 136 DMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAY-TKGRRSKDALELWREM 194

Query: 286 HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
               V      +  +L  C+ + A  +G EVH  +   G + DV L  AL++ Y KC D+
Sbjct: 195 RAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDI 254

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           E++ ++F  +  ++D L W+ +I+    +    +A+ LF  M     +    T + +L +
Sbjct: 255 ENSVRVFHSMP-VKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLIS 313

Query: 406 CAKVGAFHEGKQ-------IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           C  +G   +GK+       +HG   K      +    C++ +  R+  +E A ++   M 
Sbjct: 314 CTHLGLVSDGKKYFSSMSVVHGVTPK------VQHYGCMVDLLGRSGHIEEAKQLIRDMP 367

Query: 459 -DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG-SYQNV 516
            + +   W +++ +      V+VA     K+    + P       LLS  +    S++ V
Sbjct: 368 FEPDAVIWRALLGACRIYKNVEVAEEAMAKLRV--LDPHADGHYVLLSNIYAQANSWEGV 425

Query: 517 LTLLRGMQ 524
             + R ++
Sbjct: 426 AEMRRTLR 433


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like
            [Glycine max]
          Length = 721

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 241/731 (32%), Positives = 377/731 (51%), Gaps = 74/731 (10%)

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            ++ A  LFS + +       N+++    R    EN + L+  ++ +       +   +L+
Sbjct: 65   LDYALSLFSHIPN-PPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLK 123

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
            A +K+ A + G +IHG                            LA++      D  + S
Sbjct: 124  AVSKLSALNLGLEIHG----------------------------LASKFGFFHADPFIQS 155

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
              ++I+ Y   G +  A  LF+KM+      D++TWN ++ G+  +  Y +VL L   M+
Sbjct: 156  --ALIAMYAACGRIMDARFLFDKMSHR----DVVTWNIMIDGYSQNAHYDHVLKLYEEMK 209

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            + G  P+   +  VL A      L YG+  H +I  NG     ++ TSL++MY     + 
Sbjct: 210  TSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMH 269

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
             A+EV+D + ++++V   +++SG                                   Y+
Sbjct: 270  LAREVYDQLPSKHMVVSTAMLSG-----------------------------------YA 294

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G  ++A  I   M    +  ++V W+++ISG  ++    E+L+ F +MQ+  I P+  
Sbjct: 295  KLGMVQDARFIFDRM----VEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQI 350

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            TM S++  C  +G L   K IH    KNGF +   +   LIDMY+K GNL  AREVF   
Sbjct: 351  TMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENM 410

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K + SW+ MI  FA++G+   AI LFH + E   +P+ +TF  +L AC ++GLVEEG 
Sbjct: 411  PRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQ 470

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            K+F SM  ++ I P  EHY CMVDL  +A +L +A + I TMPF P+  IWG+L+ +C+ 
Sbjct: 471  KFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQN 530

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            HG +E  E A+ RL +LEP +     ++ N+ A   RW+DV  +R  M   GV      S
Sbjct: 531  HGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACS 590

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
             I+++  VHVF      H  + EIY +L  +VS++K +GY P T  +  D++EEEK +V+
Sbjct: 591  RIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVV 650

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
            L H+EKLA+ YGL+  +  + IR++KN R+C DCH+  K +S V   EI +RD  RFHHF
Sbjct: 651  LWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHF 710

Query: 1065 REGECSCNDCW 1075
              G CSC D W
Sbjct: 711  NGGICSCRDYW 721



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 243/525 (46%), Gaps = 15/525 (2%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAK----AFFLYFSRSYAD 260
           + L  VK  HAQ+++  K+ NS+ ++  L+         + +A     + F +       
Sbjct: 23  KTLRHVKQIHAQILR-SKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPNPPTR 81

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           +S+ L    S G   +  L ++  L   G          +LK  +KL A  LG+E+H   
Sbjct: 82  FSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLA 141

Query: 321 IKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            K GF   D  ++ AL+  Y  C  +  A  LF ++S   D + WN +I    +N  +++
Sbjct: 142 SKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSH-RDVVTWNIMIDGYSQNAHYDH 200

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            +KL+ EM+ S  +  +  +  +L ACA  G    GK IH ++  +       +   L++
Sbjct: 201 VLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVN 260

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY+    + LA  V+D +   ++    +M+S Y  LG V  A  +F++M    ++ D++ 
Sbjct: 261 MYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRM----VEKDLVC 316

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           W+ ++SG+         L L   MQ     P+  ++  V+ A   +  L   +  H Y  
Sbjct: 317 WSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYAD 376

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           +NG    L +  +L+DMY K   L  A+EVF+NM  +N+++W+S+I+ +   G   +A  
Sbjct: 377 KNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIA 436

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG-IYPNVVTWTSLISGS 678
           + ++M+E+ I+P+ V++  ++   S  G  +E       M N   I P    +  ++   
Sbjct: 437 LFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLY 496

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
            +  + R++++    M      PN     SL+  C   G ++ G+
Sbjct: 497 CRANHLRKAMELIETMP---FPPNVIIWGSLMSACQNHGEIELGE 538


>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/557 (39%), Positives = 317/557 (56%), Gaps = 43/557 (7%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M  LG   +  ++  VL++  +L  +  GR  HG  LR GL+ D YVG SL+DMYVK   
Sbjct: 98   MHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKC-- 155

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
                                         G+  +A+K+ ++M    I  D+ SWN+L++G
Sbjct: 156  -----------------------------GVIGDARKLFDKM----IVRDMASWNALIAG 182

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE--DIK 700
            Y   G+   A  +   M++     N+V+WT++ISG  QN    ++L  F +M Q+  ++K
Sbjct: 183  YMKEGEIGVAEDLFERMEHR----NIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMK 238

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
            PN  T+ S+L  C     L+ G+ IH      G   ++ V T L  MY+K  +L  AR  
Sbjct: 239  PNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCC 298

Query: 761  FRKSAN--KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            F   A   K L +WN MI  +A +G G EA+ +F  +L  G QPDA+TF  LL+ C +SG
Sbjct: 299  FDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSG 358

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            L++ G  +F+ M T +++ P +EHY+C+VDLLG+AG L EA + I  MP +   ++WGAL
Sbjct: 359  LIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGAL 418

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            L +CR H +LE AE+A+RRLF LEP NS NY L+ NL A +  WE+V++LR  +   G+K
Sbjct: 419  LAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMK 478

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                 SWI+I+   H+F      HP   EIY  L  L  ++K  GY+PDT  V  DI EE
Sbjct: 479  KSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEE 538

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            EK   L +H+EKLAI +GL+ T+    +RV KN R+C DCH A K++S +  REI +RD 
Sbjct: 539  EKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDL 598

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFH F++G CSC D W
Sbjct: 599  NRFHCFKDGSCSCGDYW 615



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 8/268 (2%)

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           ++ +  M F      + T+  +L++CA +     G+ +HG  L+  LE +  V   LI M
Sbjct: 92  LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y +   +  A ++FD M   +++SWN++I+ Y   G + VA  LF +M       +I++W
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME----HRNIVSW 207

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLG--FRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
             ++SG+  +G  +  L L   M   G   +PN  ++  VL A  +   L+ GR  H + 
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFA 267

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGYCFKGLFVN 616
              GL  +  V T+L  MY K   L  A+  FD +    +N++AWN++I+ Y   G  V 
Sbjct: 268 NGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVE 327

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
           A  +   M    ++PD V++  L+SG S
Sbjct: 328 AVSIFENMLRAGVQPDAVTFMGLLSGCS 355



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 119/262 (45%), Gaps = 34/262 (12%)

Query: 279 LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
           LE +  +H  G++  +  L  +LK C  L    +G  VH   ++ G + D ++  +L++ 
Sbjct: 92  LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151

Query: 339 YGKCRDVESANKLFSE--VSDL------------------EDDLL----------WNEII 368
           Y KC  +  A KLF +  V D+                   +DL           W  +I
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211

Query: 369 MVKLRNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
               +N   E A+ LF EM    S  K    TIV +L ACA+  A   G++IH +     
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDH--NLSSWNSMISSYTGLGYVDVAWSL 484
           L  N SV   L  MY++   L  A   FD +  +  NL +WN+MI++Y   G    A S+
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331

Query: 485 FNKMNSSRIQPDIITWNCLLSG 506
           F  M  + +QPD +T+  LLSG
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSG 353



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 4/146 (2%)

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           L+ + +M    +  ++ T+  +L++C  L  +  G+ +H   L+ G   D YV   LIDM
Sbjct: 92  LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           Y K G +  AR++F K   + +ASWN +I G+   G     I +  +L E     + +++
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGE----IGVAEDLFERMEHRNIVSW 207

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTD 833
           TA+++    +G  E+    FD M  D
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEMLQD 233


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 750

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 241/742 (32%), Positives = 368/742 (49%), Gaps = 88/742 (11%)

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            ++ K   A + F+EM  +       +   + +AC ++ +   G+ +H  +       ++ 
Sbjct: 58   KHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVL 117

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            + NC++ MY     LE A ++FD M D N  S  +MIS+Y   G +D A  LF++M  S 
Sbjct: 118  LQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLES- 176

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                                              G +P  S  + +L+++   R L  GR
Sbjct: 177  ----------------------------------GDKPPSSMYTTLLKSLVNPRALDIGR 202

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H +++R GL  +  + T +++MYVK   L  A+ VFD M  +  VAW  L+ GY   G
Sbjct: 203  QIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAG 262

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI----------WGQSKEALV-------- 654
               +A K+   +  E      V W+S V    +          +G+   A V        
Sbjct: 263  RARDALKLFVDLITEG-----VEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECE 317

Query: 655  -------IIHHMKNSGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
                   +  ++K S              PN V+W+++ISG  Q   + E++K F  ++ 
Sbjct: 318  VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 377

Query: 697  ED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
            ++ +  NS T +S+ Q C  L     G ++H   +K   I   Y  + LI MYSK G L 
Sbjct: 378  KNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 437

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             A EVF    N  + +W   I G A YGN  EA+ LF +++  G +P+++TF A+L AC 
Sbjct: 438  DAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 497

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            ++GLVE+G  Y D+M   YN+ PTI+HY CM+D+  ++G LDEA  F++ MPF+PDA  W
Sbjct: 498  HAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSW 557

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
               L  C  H +LE  +IA   L +L+P ++A Y L  NL   + +WE+   +   M+E 
Sbjct: 558  KCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNER 617

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
             +K  L  SWIQ    +H F      HP + EIY +L      M+   +    +C   + 
Sbjct: 618  MLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFDGFMEGDMF----QCSMTER 673

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKT--KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
             E+     LL H+E+LAI +GL+     +RAPI+V KN R C DCH  AK++SLV G EI
Sbjct: 674  REQ-----LLDHSERLAIAFGLISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEI 728

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD  RFHHF+EG+CSCND W
Sbjct: 729  VIRDSRRFHHFKEGKCSCNDYW 750



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 236/532 (44%), Gaps = 47/532 (8%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
           C      + R LS  +  H +M +MG I N   ++++ +   Y E G    A K F    
Sbjct: 86  CLFEACRELRSLSHGRLLHNRM-RMG-IENPSVLLQNCVLQMYCECGSLEDADKLFDEMS 143

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
             +    ++ +  Y    G + + + ++  +   G    S + T +LK      A  +G 
Sbjct: 144 DLNAVSRTTMISAYAE-QGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGR 202

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +I+ G   +  ++  ++N Y KC  +  A ++F +++ ++  + W  +++   + 
Sbjct: 203 QIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMA-VKKPVAWTGLMVGYTQA 261

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            +  +A+KLF ++     +  S     +L+ACA +     GKQIH  V K  LE  +SV 
Sbjct: 262 GRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVG 321

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+  Y + +  E A R F  +++ N  SW+++IS Y  +   + A   F  + S    
Sbjct: 322 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK--- 378

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
                 N ++   FT+ S                         + QA + L     G + 
Sbjct: 379 ------NAVVLNSFTYTS-------------------------IFQACSVLADCNIGGQV 407

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H   ++  L    Y  ++L+ MY K  CL +A EVF++M N +IVAW + ISG+ + G  
Sbjct: 408 HADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNA 467

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG---QSKEALVIIHHMKNSGIYPNVVTW 671
             A ++  +M    +KP+ V++ ++++  S  G   Q K  L  +  ++   + P +  +
Sbjct: 468 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTM--LRKYNVAPTIDHY 525

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             +I    ++    E+L+F   M+    +P++ +    L  C     L+ GK
Sbjct: 526 DCMIDIYARSGLLDEALRF---MKNMPFEPDAMSWKCFLSGCWTHKNLELGK 574


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
            At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/746 (31%), Positives = 370/746 (49%), Gaps = 85/746 (11%)

Query: 403  LQACAKVGAFHEG---KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            ++ C  +GA ++    K IHG ++++       + N ++  Y+       A RVFD +  
Sbjct: 10   IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             NL SWN+++ +Y+  G +    S F K+       D +TWN L+ G+   G        
Sbjct: 70   PNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSG-------- 117

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKY---------GRESHGYILRNGLDYDLYVG 570
            L G     +       S  L  VT + +LK          G++ HG +++ G +  L VG
Sbjct: 118  LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 177

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL-------------------------- 604
            + L+ MY    C+ +A++VF  + +RN V +NSL                          
Sbjct: 178  SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS 237

Query: 605  ----ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI----- 655
                I G    GL   A +   +M+ + +K D   + S++      G   E   I     
Sbjct: 238  WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297

Query: 656  -----------------------IHHMK---NSGIYPNVVTWTSLISGSLQNENYRESLK 689
                                   +H+ K   +     NVV+WT+++ G  Q     E++K
Sbjct: 298  RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357

Query: 690  FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
             F+ MQ+  I P+  T+   +  C  +  L+ G + H   + +G I    V+  L+ +Y 
Sbjct: 358  IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417

Query: 750  KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            K G++  +  +F +   +   SW  M+  +A +G   E I LF ++++ G +PD +T T 
Sbjct: 418  KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477

Query: 810  LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
            +++AC  +GLVE+G +YF  M+++Y I+P+I HYSCM+DL  ++G L+EA  FI  MPF 
Sbjct: 478  VISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP 537

Query: 870  PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
            PDA  W  LL +CR  G+LE  + A+  L +L+P + A Y L+ ++ A   +W+ V +LR
Sbjct: 538  PDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLR 597

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              M E  VK     SWI+    +H FSA+    P   +IY +L  L +++   GY PDT 
Sbjct: 598  RGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTS 657

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V+ D++E  K K+L  H+E+LAI +GL+   S  PIRV KN RVC DCH A K++S V 
Sbjct: 658  FVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVT 717

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
            GREI +RD  RFH F++G CSC D W
Sbjct: 718  GREILVRDAVRFHRFKDGTCSCGDFW 743



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 232/525 (44%), Gaps = 79/525 (15%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L+  Y K   +      F ++ D  D + WN +I     +     A+K +  M    +  
Sbjct: 78  LLLAYSKAGLISEMESTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136

Query: 395 ISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           ++R T++ ML+  +  G    GKQIHG V+K   ES L V + L+ MY+    +  A +V
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F  + D N   +NS++      G ++ A  LF  M     + D ++W  ++ G   +G  
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLA 251

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
           +  +   R M+  G + +      VL A   L  +  G++ H  I+R      +YVG++L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD- 632
           +DMY K  CL  A+ VFD MK +N+V+W +++ GY   G    A K+   M+   I PD 
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371

Query: 633 ------------------------------LVSW----NSLVSGYSIWGQSKEALVIIHH 658
                                         L+ +    NSLV+ Y   G   ++  + + 
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431

Query: 659 MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
           M       + V+WT+++S   Q     E+++ F +M Q  +KP+  T++ ++  C   GL
Sbjct: 432 MN----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           ++ G+    L                  M S+ G + S            +  ++CMI  
Sbjct: 488 VEKGQRYFKL------------------MTSEYGIVPS------------IGHYSCMIDL 517

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
           F+  G  +EA+   + +    F PDAI +T LL+AC+N G +E G
Sbjct: 518 FSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIG 559



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/523 (23%), Positives = 220/523 (42%), Gaps = 70/523 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + G  +     F     R    W+  +E Y S  G V   ++ +  +      
Sbjct: 77  NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGY-SLSGLVGAAVKAYNTMMRDFSA 135

Query: 292 FRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
             +R+ L  +LKL +      LG ++H  +IK GF+  + +   L+  Y     +  A K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195

Query: 351 LFSEVSDL-----------------------------EDDLLWNEIIMVKLRNEKWENAI 381
           +F  + D                              +D + W  +I    +N   + AI
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
           + FREM+    K        +L AC  +GA +EGKQIH  ++++  + ++ V + LI MY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            +   L  A  VFD MK  N+ SW +M+  Y   G  + A  +F  M  S I PD     
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD----- 370

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
                H+T G                           + A   +  L+ G + HG  + +
Sbjct: 371 -----HYTLGQ-------------------------AISACANVSSLEEGSQFHGKAITS 400

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
           GL + + V  SL+ +Y K   + ++  +F+ M  R+ V+W +++S Y   G  V   ++ 
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQ 680
           ++M +  +KPD V+   ++S  S  G  ++       M +  GI P++  ++ +I    +
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
           +    E+++F   M      P++   ++LL  C   G L+ GK
Sbjct: 521 SGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGK 560



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 33/325 (10%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H Q+IK+G  + S  +V S L++ Y   G  + A K F+    R+   ++S +    
Sbjct: 159 KQIHGQVIKLG--FESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216

Query: 270 SFG-----------------------------GEVQELLEVWGELHGKGVIFRSRILTII 300
           + G                             G  +E +E + E+  +G+         +
Sbjct: 217 ACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L  C  L A   G ++HA +I+  F   +++  AL++ Y KC+ +  A  +F  +   ++
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ-KN 335

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
            + W  +++   +  + E A+K+F +MQ S       T+ + + ACA V +  EG Q HG
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
             + S L   ++V N L+++Y +   ++ +TR+F+ M   +  SW +M+S+Y   G    
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLS 505
              LF+KM    ++PD +T   ++S
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVIS 480



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 126/272 (46%), Gaps = 7/272 (2%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           ++   W++ +  Y   G   +E ++++ ++   G+      L   +  C  + +   G +
Sbjct: 334 KNVVSWTAMVVGYGQTG-RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            H   I  G    V +  +L+  YGKC D++ + +LF+E+ ++ D + W  ++    +  
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQFG 451

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVC 434
           +    I+LF +M     K    T+  ++ AC++ G   +G++    +     +  ++   
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511

Query: 435 NCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA-WSLFNKMNSSR 492
           +C+I ++SR+ +LE A R  + M    +   W +++S+    G +++  W+  + +    
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
             P    +  L S + + G + +V  L RGM+
Sbjct: 572 HHP--AGYTLLSSIYASKGKWDSVAQLRRGMR 601



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 13/241 (5%)

Query: 703 STTMSSLLQTCGGLGLLQNG---KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           S   S  ++ C GLG        K IH   ++     + ++   ++  Y+   +   AR 
Sbjct: 3   SNYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARR 62

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VF +     L SWN +++ ++  G   E    F +L +     D +T+  L+     SGL
Sbjct: 63  VFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGL 118

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF---IRTMPFKPDATIWG 876
           V    K +++M  D++   T      M+ L    G++         +  + F+    +  
Sbjct: 119 VGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS 178

Query: 877 ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            LL    ++ ++     A +  + L+  N+  YN +M  L      ED  +L   M++  
Sbjct: 179 PLL---YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS 235

Query: 937 V 937
           V
Sbjct: 236 V 236


>gi|297850366|ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1490

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 248/819 (30%), Positives = 410/819 (50%), Gaps = 52/819 (6%)

Query: 267  DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF- 325
            DY    G + E  +    L  +G   +      +L+ C    +  LG  +HA     G  
Sbjct: 54   DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLNLLESCIDSGSIHLGRILHARF---GLF 110

Query: 326  -DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
             + DV ++  L++ Y KC  +  A K+F  + +  +   W+ +I    R  +W    KLF
Sbjct: 111  PEPDVFVETKLLSMYAKCGCLVDARKVFDSMRE-RNLYTWSAMIGAYSRENRWREVSKLF 169

Query: 385  REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            R M             K+LQ CA  G    GK IH  V+K  + S L V N ++++Y++ 
Sbjct: 170  RLMMEEGVLPDDFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKC 229

Query: 445  NKLELATRVFDSMKDHNLSSWNS-----------------------------------MI 469
             + + AT+ F  MK+ ++ +WNS                                   +I
Sbjct: 230  GEWDFATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNILI 289

Query: 470  SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
              Y  LG  D A  L  KM +  I  D+ TW  ++SG   +G     L + R M   G  
Sbjct: 290  GGYNQLGKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
            PN  ++   + A + L+++  G E H   ++ G   D+ VG SL+DMY K   L++A++V
Sbjct: 350  PNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409

Query: 590  FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
            FD++KN+++  WNS+I+GYC  G    A ++  +M++  ++P++++WN+++SGY   G  
Sbjct: 410  FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISGYIKNGDE 469

Query: 650  KEALVIIHHMKNSG-IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             EA+ +   M+  G +  N  TW  +I+G +QN    ++L+ F +MQ     PNS T+ S
Sbjct: 470  GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMPNSVTILS 529

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            LL  C  L   +  +EIH   L+        V   L D Y+KSG++  ++ +F     K 
Sbjct: 530  LLPACANLLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGMETKD 589

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            + +WN +I G+ ++G+   A+ LF+++   G +P+  T ++++ A    G V+EG K F 
Sbjct: 590  IITWNSLIGGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKKVFY 649

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            S++ DY+IIP +EH S MV L G++  L+EA  FI+ M  + +  IW + L  CRIHG +
Sbjct: 650  SIANDYHIIPALEHCSAMVSLYGRSNRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDI 709

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW-EDVERLRHSMDEVGVKSVLVWSWIQ 947
            + A  A+  LF LEP N+   N++  + A+  +    +E  +   D + +K  L  SWI+
Sbjct: 710  DMAIHAAENLFSLEPENTVTENIVSQIYALGAKLGRSLEGKKPRRDNL-LKKPLGQSWIE 768

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +  ++H F+        T      LY  V +M ++    D       I+EE + +    H
Sbjct: 769  VRNLIHTFTTGDQSKLCTD----LLYPWVEKMCRVDNRSDQYNGELLIEEEGREETCGIH 824

Query: 1008 TEKLAIVYGLMKTKSRAP---IRVIKNTRVCSDCHTAAK 1043
            +EK A+ +GL+ + SRAP   IR++KN R+C DCH  AK
Sbjct: 825  SEKFAMAFGLI-SSSRAPKATIRILKNLRMCRDCHNTAK 862



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 255/540 (47%), Gaps = 39/540 (7%)

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           +S  K  S     E +++ +E +    RN     A K    +    +K    T + +L++
Sbjct: 31  KSRKKNLSFTKKKEPNIIPDEQLDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLNLLES 90

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
           C   G+ H G+ +H        E ++ V   L+SMY++   L  A +VFDSM++ NL +W
Sbjct: 91  CIDSGSIHLGRILHAR-FGLFPEPDVFVETKLLSMYAKCGCLVDARKVFDSMRERNLYTW 149

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           ++MI +Y+                                       ++ V  L R M  
Sbjct: 150 SAMIGAYS-----------------------------------RENRWREVSKLFRLMME 174

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            G  P+      +LQ       ++ G+  H  +++ G+   L V  S++ +Y K      
Sbjct: 175 EGVLPDDFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKCGEWDF 234

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           A + F  MK R++VAWNS++  YC  G    A +++ +ME+E I P LV+WN L+ GY+ 
Sbjct: 235 ATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQ 294

Query: 646 WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
            G+   A+ ++  M+N GI  +V TWT++ISG + N    ++L  F +M    + PN+ T
Sbjct: 295 LGKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354

Query: 706 MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
           + S +  C  L ++  G E+H + +K GFI D  V   L+DMYSK G L+ AR+VF    
Sbjct: 355 IMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 414

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
           NK + +WN MI G+   G   +A  LF  + +   +P+ IT+  +++    +G   E   
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISGYIKNGDEGEAMD 474

Query: 826 YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK---PDATIWGALLGSC 882
            F  M  D  +      ++ ++    + G  D+A +  R M F    P++    +LL +C
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMPNSVTILSLLPAC 534



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 17/261 (6%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLY-----FSRSYADWSSFLEDYESFGGEVQELLEVWGELH 286
           ++I  Y++ GD   A   F          R+ A W+  +  Y    G+  + LE++ ++ 
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ-NGKKDDALEIFRKMQ 516

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
               +  S  +  +L  C  L+   +  E+H  +++R  D    +K AL + Y K  D+ 
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIG 576

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            +  +F  + + +D + WN +I   + +  +  A++LF +M+    K    T+  ++ A 
Sbjct: 577 YSKTIFMGM-ETKDIITWNSLIGGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAH 635

Query: 407 AKVGAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
             +G   EGK++     + Y +  ALE     C+ ++S+Y R+N+LE A +    M   +
Sbjct: 636 GLMGNVDEGKKVFYSIANDYHIIPALEH----CSAMVSLYGRSNRLEEALQFIQEMNIQS 691

Query: 462 LSS-WNSMISSYTGLGYVDVA 481
            +  W S ++     G +D+A
Sbjct: 692 ETPIWESFLTGCRIHGDIDMA 712


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 840

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/773 (29%), Positives = 383/773 (49%), Gaps = 101/773 (13%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            +++ Y    ++  A KLF+E + +++ + W+ ++    +N      ++ F +M     K 
Sbjct: 74   MISAYANLGNLVEARKLFNE-TPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKP 132

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               T+  +L+AC+ +   H GK IH Y +K  LE+N+ V   L+ MYS+   L  A  +F
Sbjct: 133  SQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF 192

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
             S+ D                                  + + + W  +L+G+  +G   
Sbjct: 193  FSLPD----------------------------------RKNYVQWTAMLTGYAQNGESL 218

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
              +   + M++ G   N  +   +L A T +    +GR+ HG I+ +G   ++YV ++L+
Sbjct: 219  KAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALV 278

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            DMY K   L +A+ + D M+  ++V WNS+I G    G    A  + ++M   +I+ D  
Sbjct: 279  DMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDF 338

Query: 635  SWNSLV---------------------SGYSIWGQSKEALVIIHHMK----------NSG 663
            ++ S++                     +G+        ALV ++  +          N  
Sbjct: 339  TYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI 398

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
            +  +V++WTSL++G + N  + ++L+ F  M+   +  +   ++ +   C  L +++ G+
Sbjct: 399  LDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGR 458

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            ++H   +K+           LI MY+K G L+ A  VF     + + SW  +I+G+A   
Sbjct: 459  QVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYA--- 515

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
                                             +GLVE G  YF+SM   Y I P  +HY
Sbjct: 516  --------------------------------QNGLVETGQSYFESMEKVYGIKPASDHY 543

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +CM+DLLG+AG ++EA   +  M  +PDATIW +LL +CR+HG+LE  E A + L KLEP
Sbjct: 544  ACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEP 603

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             NS  Y L+ N+ +++ RWED   +R +M  +G+     +SWI++   VH F +E   HP
Sbjct: 604  SNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHP 663

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
               EIY ++  ++  +K+ G+VPD     +D+DEE K + L  H+EKLA+ +GL+     
Sbjct: 664  LAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKG 723

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCWQ 1076
            APIR+ KN RVC DCH+A KY+S +  R I LRD   FHHF EG+CSC D W+
Sbjct: 724  APIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCGDFWK 776



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 228/529 (43%), Gaps = 76/529 (14%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y   G+   A K F     ++   WSS +  Y   G EV+ L + + ++   G   
Sbjct: 74  MISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQ-FSQMWSDGQKP 132

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               L  +L+ C+ L     G  +H   IK   + ++ +   L++ Y KC+ +  A  LF
Sbjct: 133 SQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF 192

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             + D ++ + W  ++    +N +   AI+ F+EM+    ++   T   +L AC  + A+
Sbjct: 193 FSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAY 252

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G+Q+HG ++ S    N+ V + L+ MY++   L  A  + D+M+  ++  WNSMI   
Sbjct: 253 AFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGC 312

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              GY++ A  LF+KM++  I+ D           FT+ S                    
Sbjct: 313 VTHGYMEEALVLFHKMHNRDIRID----------DFTYPS-------------------- 342

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
                VL+++   + LK G   H   ++ G D    V  +L+DMY K   L  A +VF+ 
Sbjct: 343 -----VLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNK 397

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD-------------------- 632
           + ++++++W SL++GY   G    A ++   M    +  D                    
Sbjct: 398 ILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFG 457

Query: 633 ---------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                          L + NSL++ Y+  G  ++A+ +   M+      NV++WT++I G
Sbjct: 458 RQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETR----NVISWTAIIVG 513

Query: 678 SLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             QN        +F  M++   IKP S   + ++   G  G +   + +
Sbjct: 514 YAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHL 562


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/718 (32%), Positives = 374/718 (52%), Gaps = 67/718 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ++K C  L    L   VH      GF  D+ +  +L+  Y     +  A  LF E+  + 
Sbjct: 183 VIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELP-VR 241

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D +LWN ++   ++N  + +A+  F+EM+ S  K  S + V +L  CA  G    G Q+H
Sbjct: 242 DCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLH 301

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G V++S  ES+ +V N +I+MYS+   L  A ++FD M                      
Sbjct: 302 GLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMP--------------------- 340

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                         Q D +TWN L++G+  +G     + L + M + G + +  + +  L
Sbjct: 341 --------------QTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFL 386

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            +V +   LKY +E H YI+R+G+ +D+Y+ ++L+D+Y K   ++ A + F      ++ 
Sbjct: 387 PSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVA 446

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK--------- 650
              ++ISGY   GL V A  +   + +E + P+ ++  S++   +     K         
Sbjct: 447 VCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDI 506

Query: 651 --EALVIIHHMKNSGIY--------------------PNVVTWTSLISGSLQNENYRESL 688
             + L  +  + +S  Y                     + V W  +I    QN     ++
Sbjct: 507 LKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAI 566

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
             F QM     K +S ++S+ L  C     L  GKE+HC  ++N FI D +VA+ LIDMY
Sbjct: 567 DLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMY 626

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
           SK G L  AR VF     K   SWN +I  +  +G  +E + LFHE++E G QPD +TF 
Sbjct: 627 SKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFL 686

Query: 809 ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            +++AC ++GLV+EG  YF  M+ +Y I   +EH++CMVDL G+AG L EA+D I++MPF
Sbjct: 687 VIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPF 746

Query: 869 KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            PDA  WG+LLG+CR+HG++E A++AS+ L +L+P NS  Y L+ N+ A +  WE V ++
Sbjct: 747 TPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKV 806

Query: 929 RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
           R  M E GV+ +  +SWI ++   H+FSA    HP + EIY  L +L+ E++K GYVP
Sbjct: 807 RSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVP 864



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 262/603 (43%), Gaps = 69/603 (11%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA ++  G +  + L   ++  Y  CR  +    LF  +  L   L WN +I      
Sbjct: 97  QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRL-QLCYSLPWNWLIRGFSML 155

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             ++ A+  F  M  S+      T   +++AC  +      K +H          +L + 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           + LI +Y+ N                               GY+  A  LF+++      
Sbjct: 216 SSLIKLYTDN-------------------------------GYIHDAKYLFDELPVR--- 241

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            D I WN +L+G+  +G + + L   + M++   +PN  S   +L       +++ G + 
Sbjct: 242 -DCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQL 300

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           HG ++R+G + D  V  +++ MY K   L +A+++FD M   + V WN LI+GY   G  
Sbjct: 301 HGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFT 360

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNS-----LVSGYSIWGQSKEALVIIH------HMKNS- 662
             A  +   M    +K D +++ S     L SG   + +   + ++ H      ++K++ 
Sbjct: 361 DEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSAL 420

Query: 663 -GIY------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             IY                   +V   T++ISG + N    E+L  F  + QE + PN 
Sbjct: 421 VDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNC 480

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            TM+S+L  C  L  L+ GKE+HC  LK G      V + +  MY+KSG L  A + FR+
Sbjct: 481 LTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRR 540

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              K    WN MI+ F+  G  + AI LF ++  +G + D+++ +A L+AC N   +  G
Sbjct: 541 MPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYG 600

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
            K         + I      S ++D+  K G L  A      M +K + + W +++ +  
Sbjct: 601 -KELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVS-WNSIIAAYG 658

Query: 884 IHG 886
            HG
Sbjct: 659 NHG 661



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 221/512 (43%), Gaps = 78/512 (15%)

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +QIH  VL   +  +L++ + ++ MY      +    +F  ++      WN +I  ++ L
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G  D A   F +M  S + PD  T+                                   
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTF----------------------------------- 180

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
             V++A   L  +   +  H      G   DL++G+SL+ +Y  N  + +A+ +FD +  
Sbjct: 181 PYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPV 240

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------- 636
           R+ + WN +++GY   G F +A     +M    +KP+ VS+                   
Sbjct: 241 RDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQL 300

Query: 637 ----------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                           N++++ YS  G   +A  I   M  +    + VTW  LI+G +Q
Sbjct: 301 HGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQT----DTVTWNGLIAGYVQ 356

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           N    E++  F  M    +K +S T +S L +    G L+  KE+H   +++G   D Y+
Sbjct: 357 NGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYL 416

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            + L+D+Y K G+++ A + F+++    +A    MI G+ + G   EA+ LF  L++ G 
Sbjct: 417 KSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGM 476

Query: 801 QPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
            P+ +T  ++L AC     ++ G + + D +      +  +   S +  +  K+G LD A
Sbjct: 477 VPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVG--SSITYMYAKSGRLDLA 534

Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           + F R MP K D+  W  ++ S   +G  E A
Sbjct: 535 YQFFRRMPVK-DSVCWNLMIVSFSQNGKPELA 565



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 141/618 (22%), Positives = 250/618 (40%), Gaps = 80/618 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  Y + G    A   F     R    W+  L  Y    G+    L  + E+    V 
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVK-NGDFNSALGTFQEMRNSCVK 275

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S     +L +C        G+++H  +I+ GF+ D  +   ++  Y KC ++  A K+
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F ++    D + WN +I   ++N   + A+ LF+ M  S  K  S T    L +  K G+
Sbjct: 336 F-DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGS 394

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               K++H Y+++  +  ++ + + L+ +Y +   +E+A + F           N+++  
Sbjct: 395 LKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ---------NTLV-- 443

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                                   D+     ++SG+  +G     L L R +   G  PN
Sbjct: 444 ------------------------DVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPN 479

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             +++ VL A   L  LK G+E H  IL+ GL+    VG+S+  MY K+  L  A + F 
Sbjct: 480 CLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFR 539

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----IW 646
            M  ++ V WN +I  +   G    A  +  QM     K D VS ++ +S  +      +
Sbjct: 540 RMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYY 599

Query: 647 GQSKEALVIIHHMKNSGI------------------------------YPNVVTWTSLIS 676
           G+     V+    +NS I                              + N V+W S+I+
Sbjct: 600 GKELHCFVV----RNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIA 655

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFI 735
               +   RE L  F +M +  I+P+  T   ++  CG  GL+  G     C+  + G  
Sbjct: 656 AYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGIC 715

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                   ++D+Y ++G L  A +  +         +W  ++    ++GN + A L    
Sbjct: 716 ARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKH 775

Query: 795 LLETGFQPDAITFTALLA 812
           L+E    P+   +  LL+
Sbjct: 776 LVE--LDPNNSGYYVLLS 791



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 158/314 (50%), Gaps = 7/314 (2%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFS 255
           FL    K   L   K  H+ +++ G  +  D  +KS L+  Y + GD   A K F     
Sbjct: 385 FLPSVLKSGSLKYCKEVHSYIVRHGVPF--DVYLKSALVDIYFKGGDVEMACKTFQQNTL 442

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
              A  ++ +  Y   G  V E L ++  L  +G++     +  +L  C  L +  LG E
Sbjct: 443 VDVAVCTAMISGYVLNGLNV-EALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKE 501

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H  ++K+G +    +  ++   Y K   ++ A + F  +  ++D + WN +I+   +N 
Sbjct: 502 LHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMP-VKDSVCWNLMIVSFSQNG 560

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
           K E AI LFR+M  S  K  S ++   L ACA   A + GK++H +V++++  S+  V +
Sbjct: 561 KPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVAS 620

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            LI MYS+  KL LA  VFD M   N  SWNS+I++Y   G       LF++M  + IQP
Sbjct: 621 TLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQP 680

Query: 496 DIITWNCLLS--GH 507
           D +T+  ++S  GH
Sbjct: 681 DHVTFLVIMSACGH 694



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 142/327 (43%), Gaps = 18/327 (5%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  H  ++K G + N   +  S+ + Y + G    A + F     +    W+  +  + S
Sbjct: 500 KELHCDILKKG-LENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSF-S 557

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G+ +  ++++ ++   G  F S  L+  L  C    A + G E+H  +++  F  D  
Sbjct: 558 QNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTF 617

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +   L++ Y KC  +  A  +F ++ D ++++ WN II     + +    + LF EM  +
Sbjct: 618 VASTLIDMYSKCGKLALARSVF-DMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEA 676

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC------NCLISMYSRN 444
             +    T + ++ AC   G   EG     Y  +   E    +C       C++ +Y R 
Sbjct: 677 GIQPDHVTFLVIMSACGHAGLVDEGI----YYFRCMTEE-YGICARMEHFACMVDLYGRA 731

Query: 445 NKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
            +L  A     SM    +  +W S++ +    G V++A  L +K +   + P+   +  L
Sbjct: 732 GRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELA-KLASK-HLVELDPNNSGYYVL 789

Query: 504 LSG-HFTHGSYQNVLTLLRGMQSLGFR 529
           LS  H   G +++VL +   M+  G +
Sbjct: 790 LSNVHAGAGEWESVLKVRSLMKEKGVQ 816


>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/675 (34%), Positives = 350/675 (51%), Gaps = 77/675 (11%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD-HN 461
            LQ C+K     E KQIH  +LK+ L                             M+D + 
Sbjct: 21   LQRCSKQ---EELKQIHARMLKTGL-----------------------------MQDSYA 48

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            ++ + S   S T   ++  A  +F+  +    +PD   WN ++ G       +  L L +
Sbjct: 49   ITKFLSFCISSTSSDFLPYAQIVFDGFD----RPDTFLWNLMIRGFSCSDEPERSLLLYQ 104

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M       N  +   +L+A + L   +   + H  I + G + D+Y             
Sbjct: 105  RMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY------------- 151

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
                              A NSLI+ Y   G F  A  + +++ E    PD VSWNS++ 
Sbjct: 152  ------------------AVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIK 189

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            GY   G+   AL +   M       N ++WT++ISG +Q +  +E+L+ F +MQ  D++P
Sbjct: 190  GYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            ++ ++++ L  C  LG L+ GK IH    K     D+ +   LIDMY+K G ++ A EVF
Sbjct: 246  DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            +    K++ +W  +I G+A +G+G+EAI  F E+ + G +P+ ITFTA+L AC  +GLVE
Sbjct: 306  KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            EG   F SM  DYN+ PTIEHY C+VDLLG+AG LDEA  FI+ MP KP+A IWGALL +
Sbjct: 366  EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CRIH ++E  E     L  ++P +   Y    N+ AM  +W+     R  M E GV  V 
Sbjct: 426  CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD-IDEEEK 1000
              S I ++   H F A    HP   +I  +   +  ++++ GYVP+   +  D +D++E+
Sbjct: 486  GCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDER 545

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
              ++  H+EKLAI YGL+KTK    IR++KN RVC DCH   K +S +  R+I +RD  R
Sbjct: 546  EAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTR 605

Query: 1061 FHHFREGECSCNDCW 1075
            FHHFR+G+CSC D W
Sbjct: 606  FHHFRDGKCSCGDYW 620



 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 216/417 (51%), Gaps = 16/417 (3%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL-FSEVS----DLEDDLLWNEIIM 369
           ++HA ++K G   D +   A+  F   C    S++ L ++++     D  D  LWN +I 
Sbjct: 32  QIHARMLKTGLMQDSY---AITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
               +++ E ++ L++ M  SSA   + T   +L+AC+ + AF E  QIH  + K   E+
Sbjct: 89  GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           ++   N LI+ Y+     +LA  +FD + + +  SWNS+I  Y   G +D+A +LF KM 
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM- 207

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
               + + I+W  ++SG+      +  L L   MQ+    P+  S++  L A  +L  L+
Sbjct: 208 ---AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G+  H Y+ +  +  D  +G  L+DMY K   ++ A EVF N+K +++ AW +LISGY 
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNV 668
           + G    A     +M++  IKP+++++ ++++  S  G  +E  +I + M ++  + P +
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             +  ++   L      +  K FI  Q+  +KPN+    +LL+ C     ++ G+EI
Sbjct: 385 EHYGCIVD-LLGRAGLLDEAKRFI--QEMPLKPNAVIWGALLKACRIHKNIELGEEI 438



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 156/331 (47%), Gaps = 37/331 (11%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFG-DFTSAAKAFFLYFSRSYAD-WSSFLED 267
           +K  HA+M+K G + +S  + K L F       DF   A+  F  F R     W+  +  
Sbjct: 30  LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           + S   E +  L ++  +        +     +LK C+ L AF    ++HA + K G++ 
Sbjct: 90  F-SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR-- 385
           DV+   +L+N Y    + + A+ LF  + +  DD+ WN +I   ++  K + A+ LFR  
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPE-PDDVSWNSVIKGYVKAGKMDIALTLFRKM 207

Query: 386 -----------------------------EMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
                                        EMQ S  +  + ++   L ACA++GA  +GK
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267

Query: 417 QIHGYVLKSALESNLSVCNC-LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            IH Y+ K+ +  + SV  C LI MY++  ++E A  VF ++K  ++ +W ++IS Y   
Sbjct: 268 WIHSYLNKTRIRMD-SVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           G+   A S F +M    I+P++IT+  +L+ 
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTA 357


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/609 (34%), Positives = 325/609 (53%), Gaps = 32/609 (5%)

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            ++N L+      G  ++ L L   M       P+  +V+  +++ + +  L  GR    Y
Sbjct: 137  SYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAY 196

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
              + G   D +V  SL+ MY     +  A  +F  ++ + ++AWN++I+GY   G +   
Sbjct: 197  AFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEV 256

Query: 618  KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP----------- 666
             +M   M E     D V+  S+ +     G +     I  + +  G+             
Sbjct: 257  VEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDM 316

Query: 667  --------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
                                +VV W+++ISG  Q++  RE+L  F +MQ  ++ PN  TM
Sbjct: 317  YAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTM 376

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
             S+L  C  LG L+ GK +H    +        + T L+D Y+K G +K A + F     
Sbjct: 377  VSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPV 436

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            +   +W  +I G A  G  +EA+ LF  +LE   +P  +TF  +L AC +  LVEEG ++
Sbjct: 437  RNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRH 496

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F SM+ DY I P IEHY CMVDLLG+AG +DEA+ FIR MP +P+A +W ALL +C +H 
Sbjct: 497  FTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHK 556

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            ++E  E A +++  L+PC+S NY L+ N  A   +W++   +R  M E GV+ +   S I
Sbjct: 557  NVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLI 616

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            +++  +  F AE + HP   EIY +++ ++  +K +GY+P+T     D+DE EK   +  
Sbjct: 617  ELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSH 676

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            H+EKLAI +GLMK++  A IR+ KN RVC DCH+A K +S V  REI +RD  RFHHF++
Sbjct: 677  HSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKD 736

Query: 1067 GECSCNDCW 1075
            G CSCND W
Sbjct: 737  GLCSCNDYW 745



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 135/593 (22%), Positives = 251/593 (42%), Gaps = 62/593 (10%)

Query: 131 TRQNTAIVMPKLHSIYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSC 190
            R+N  I++  + ++      +      R  H    +  +    A  P   +   A+   
Sbjct: 12  ARKNAKIIITTIMNLILEARVQEMATAKRRLHLRTRMAATALPAARLPAPGMPSPAR--- 68

Query: 191 ISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAA--- 247
                    +T +   L  V   HA ++K G +  S D   SL+         TS+A   
Sbjct: 69  ---------QTPRRAALRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLS 119

Query: 248 ---KAFFL--YFSRSYADWSSFLEDYESFGGEVQELLEVWGE-LHGKGVIFRSRILTIIL 301
              + F L  +  RS   ++  +  +    G  ++ L ++ E L    V      +   +
Sbjct: 120 YAIRLFRLGPHPPRSARSYNILIRSFLR-AGHPEDALHLFVEMLDDTAVSPDQHTVANTV 178

Query: 302 KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
           K C+++    +G  V A   KRGF  D  +  +L++ Y  C DV +A+ LF  V  ++  
Sbjct: 179 KSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQ-VKGV 237

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           + WN +I   ++N  W+  +++F+ M    A     T++ +  AC ++G  + G+ I  Y
Sbjct: 238 IAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEY 297

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
             +  +  + ++   L+ MY++  +L+ A R+FD M   ++ +W++MIS YT       A
Sbjct: 298 AEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREA 357

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
            ++FN+M  + + P+ +T                                   +  VL A
Sbjct: 358 LAIFNEMQGTEVNPNDVT-----------------------------------MVSVLSA 382

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
              L  L+ G+  H YI R  L   + +GT+L+D Y K  C+++A + F++M  RN   W
Sbjct: 383 CAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTW 442

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-K 660
            +LI G    G    A ++ + M E  I+P  V++  ++   S     +E       M +
Sbjct: 443 TALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQ 502

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + GI P +  +  ++    +     E+ +F   M    I+PN+    +LL  C
Sbjct: 503 DYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMP---IEPNAVVWRALLSAC 552


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 238/715 (33%), Positives = 383/715 (53%), Gaps = 47/715 (6%)

Query: 401  KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            + L+ C        GK +H   +KS + ++  + N  + +YS+  +L  A RVFD   D 
Sbjct: 13   QFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDC 72

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            N+ S+N++IS+Y    YV+VA  LF++M     QPD +++N L++ +   G  Q    L 
Sbjct: 73   NVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 521  RGMQSLGFRPNGSSVSVVLQAV-TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M+      +G ++S ++ A    + L+   R+ H   +  GLD  + VG +L+  Y K
Sbjct: 129  LEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 580  NDCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
            N  L+ A+ +F  + ++R+ V+WNS++  Y        A ++  +M    +  D+ +  S
Sbjct: 186  NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 639  LVSGYS----IWG--QSKEALVIIHHMKNSGI--------------------------YP 666
            +++ ++    + G  Q    L+   + +NS +                           P
Sbjct: 246  VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 667  NVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            ++V W ++ISG SL  +   E+L+ F Q+Q    +P+  ++  ++  C  +     G+++
Sbjct: 306  DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 726  HCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            H L LK     +   V   LI MYSK GNL+ A+ +F         S+N MI G+A +G 
Sbjct: 366  HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 785  GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
            G +++ LF  +LE  F P  ITF ++LAAC ++G VE+G  YF+ M   + I P   H+S
Sbjct: 426  GFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485

Query: 845  CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
            CM+DLLG+AG L EA   I T+PF P    W ALLG+CRIHG++E A  A+ RL +L+P 
Sbjct: 486  CMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPL 545

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            N+A Y ++ N+ + + R +D   +R  M + GVK     SWI++++ +H+F AE   HP 
Sbjct: 546  NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPM 605

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDID----EEEKGKVLLSHTEKLAIVYGLMKT 1020
              +I   L  ++ ++KK+GY P+ R      D    + E+   L  H+EKLA+ +GLM T
Sbjct: 606  IKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMST 665

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +   PI V KN R+C DCH A KY+S V  REI +RD  RFH F++G+CSC   W
Sbjct: 666  REGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 134/569 (23%), Positives = 234/569 (41%), Gaps = 114/569 (20%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE- 359
           LK C        G  +HA  IK       +L    +  Y KCR + +A ++F    D   
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 360 -----------------------------DDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
                                        D + +N +I    R    + A +LF EM+ +
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134

Query: 391 SAKAISRTIVKMLQACA-KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                  T+  ++ AC   VG     +Q+H   + + L+S +SV N LI+ YS+N  L+ 
Sbjct: 135 FLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKE 191

Query: 450 ATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           A R+F  + +D +  SWNSM+ +Y        A  L+ +M    +  DI T   +L+   
Sbjct: 192 ARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT--- 248

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
              ++ NV  LL G+Q                              H  ++++G   + +
Sbjct: 249 ---AFTNVQDLLGGLQ-----------------------------FHAKLIKSGYHQNSH 276

Query: 569 VGTSLMDMYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYC-FKGLFVNAKKMLNQMEE 626
           VG+ L+D+Y K   C+ + ++VFD + N ++V WN++ISGY  ++ L   A +   Q++ 
Sbjct: 277 VGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQG 336

Query: 627 EEIKPDLVSW------------------------------------NSLVSGYSIWGQSK 650
              +PD  S                                     N+L++ YS  G  +
Sbjct: 337 VGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLR 396

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           +A  +   M       N V++ S+I+G  Q+    +SL  F +M + D  P + T  S+L
Sbjct: 397 DAKTLFDTMPEH----NTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVL 452

Query: 711 QTCGGLGLLQNGK-EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKT 768
             C   G +++GK   + +  K G   +A   + +ID+  ++G L  A  +      +  
Sbjct: 453 AACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPG 512

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLE 797
              W+ ++    I+GN + AI   + LL+
Sbjct: 513 FFXWSALLGACRIHGNVELAIKAANRLLQ 541



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 9/314 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFS--RSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
           +LI  Y + G F   A+  F + S  R    W+S +  Y     E  + LE++ E+  +G
Sbjct: 178 ALITSYSKNG-FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHR-EGSKALELYLEMTVRG 235

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD-VESA 348
           +I     L  +L   T +     G++ HA LIK G+  + H+   L++ Y KC   +   
Sbjct: 236 LIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDC 295

Query: 349 NKLFSEVSDLEDDLLWNEIIM-VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            K+F E+S+  D +LWN +I    L  +  + A++ FR++Q    +    ++V ++ AC+
Sbjct: 296 RKVFDEISN-PDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACS 354

Query: 408 KVGAFHEGKQIHGYVLKSALESN-LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
            + +  +G+Q+HG  LK  + SN +SV N LI+MYS+   L  A  +FD+M +HN  S+N
Sbjct: 355 NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYN 414

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QS 525
           SMI+ Y   G    +  LF +M      P  IT+  +L+     G  ++       M Q 
Sbjct: 415 SMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQK 474

Query: 526 LGFRPNGSSVSVVL 539
            G  P     S ++
Sbjct: 475 FGIEPEAGHFSCMI 488


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 243/810 (30%), Positives = 393/810 (48%), Gaps = 80/810 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            + +LC    A   G+   A    R   F + L  A+++   +  +   A ++F+++ +  
Sbjct: 94   LFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPE-R 152

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D   WN ++    ++   + A+ L+  M ++  +    T   +L++C  V  +  G+++H
Sbjct: 153  DVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVH 212

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             +VL+      + V N L++MY++   +  A +VFD                        
Sbjct: 213  AHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFD------------------------ 248

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                       S    D I+WN +++GHF +G     L L   M     +PN  +++ V 
Sbjct: 249  -----------SMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVT 297

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A   L  + + +E HG  ++ G   D+    SL+ MY     ++ A+ VF  M  R+ +
Sbjct: 298  VASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAM 357

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--------------------------- 632
             W ++ISGY   G    A ++   ME   + PD                           
Sbjct: 358  TWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 417

Query: 633  --------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                    +V  N+++  Y+   +  +A+ +   M       +VV+W+S+I+G   N   
Sbjct: 418  ESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEK----DVVSWSSMIAGFCFNHRN 473

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L +F  M   D+KPNS T  + L  C   G L++GKEIH   L+ G   + Y+   L
Sbjct: 474  FEALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNAL 532

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            ID+Y K G    A   F     K + SWN MI GF  +G+G  A+  F+++++ G  PD 
Sbjct: 533  IDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDE 592

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF ALL AC   G+V EGW+ F SM+  Y+I+P ++HY+CMVDLL +AG L EA++FI 
Sbjct: 593  VTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFIN 652

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP  PDA +WGALL  CRIH H+E  E+A++ +  LEP ++  + L+ +L A +  W+ 
Sbjct: 653  EMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDK 712

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            + R+R +M E G+      SW+++  +VH F  +   HP   EI   L  +   MK  GY
Sbjct: 713  LARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGY 772

Query: 985  VP-DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
             P ++ C     DE  K  +   H+E+LA+ +GL+ T     I V KN   C  CH   K
Sbjct: 773  APVESHCPE---DEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILK 829

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +S +  R+I +RD  + HHF++G CSC D
Sbjct: 830  MISNIVRRDIIVRDSKQLHHFKDGSCSCGD 859



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 213/504 (42%), Gaps = 43/504 (8%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           +  HA +++ G      D++ +L+  Y + GD  +A K F          W++ +  +  
Sbjct: 209 REVHAHVLRFG-FGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFE 267

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             GE    LE++  +    V      +T +      L       E+H   +KRGF  DV 
Sbjct: 268 -NGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVA 326

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
              +L+  Y     +  A  +FS + D  D + W  +I    +N   + A++++  M+ +
Sbjct: 327 FCNSLIQMYASLGMMRQARTVFSRM-DTRDAMTWTAMISGYEKNGFPDKALEVYALMEVN 385

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           +      TI   L ACA +G+   G ++H         S + V N ++ MY+++ +++ A
Sbjct: 386 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKA 445

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             VF  M + ++ SW+SMI+ +                                   F H
Sbjct: 446 IEVFKCMHEKDVVSWSSMIAGFC----------------------------------FNH 471

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
            +++  L   R M +   +PN  +    L A      L+ G+E H ++LR G++Y+ Y+ 
Sbjct: 472 RNFE-ALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLP 529

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            +L+D+YVK      A   F     +++V+WN +I+G+   G    A    NQM +    
Sbjct: 530 NALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGEC 589

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLK 689
           PD V++ +L+   S  G   E   + H M     I PN+  +  ++    +     E+  
Sbjct: 590 PDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYN 649

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
           F  +M    I P++    +LL  C
Sbjct: 650 FINEMP---ITPDAAVWGALLNGC 670


>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 242/738 (32%), Positives = 397/738 (53%), Gaps = 63/738 (8%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRG--FDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           +L+ C    A   G ++HA ++K+G  F  + +++  L+ FY KC + E++N LF  V  
Sbjct: 16  LLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVR- 74

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
           L++   W  +I +  R   ++ A+  F+EMQ +     +  +  +L+AC  +     GK 
Sbjct: 75  LKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKV 134

Query: 418 IHG-----YVLK------------SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           +HG     YV K               + N    N +I  Y +N   E A  VF  M++ 
Sbjct: 135 VHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREE 194

Query: 461 -------NLSSW--------------------------------NSMISSYTGLGYVDVA 481
                   LSS+                                +S+I+ Y+ +G ++ A
Sbjct: 195 GVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDA 254

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
            S+F++M    ++ D++TWN L+SG+   G     L +   M+    R +  +++ ++ A
Sbjct: 255 ESVFSRM----LEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSA 310

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
             ++R LK G+E H Y +RN L+ D+ V +S++DMY K + +  A+ VF++   ++++ W
Sbjct: 311 FADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILW 370

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
           N++++ +   G    A  +  QM+ E + P+++SWNSL+ G+   GQ  EA  +   M++
Sbjct: 371 NTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQS 430

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
            G+ PN+VTWT+LISG  ++    E++  F +MQ+  +KPN  ++  +L  C  L  LQ 
Sbjct: 431 LGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQI 490

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           G+ +H   +++       +AT L+DMY+K G+   A+ VF    +K L  +N MI GFA+
Sbjct: 491 GRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFAL 550

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
           +G   EA+ L+  L E G +PD ITFT  L AC ++ +V EG + F  M +++NI P+IE
Sbjct: 551 HGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSIE 610

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
           HY CMV LL + G LDEA+  I  MP+KPD  I G+LL +CR H  +E  E  S +L KL
Sbjct: 611 HYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQLLKL 670

Query: 902 EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
           +P NS NY  M N  A + RW++V+++R  M E G++ +   SWIQ+ + ++VF A    
Sbjct: 671 QPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFVAGDKS 730

Query: 962 HPATGEIYFELYHLVSEM 979
           HP T EIY  L  L+ E+
Sbjct: 731 HPETEEIYTTLALLLMEI 748



 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 237/496 (47%), Gaps = 45/496 (9%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R+   W+S +  Y    G  +E +EV+ E+  +GV      L+  L     L A   G +
Sbjct: 163 RNAVAWNSMIVGYVQ-NGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQ 221

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRN 374
            HA  +  G +   +L  +L+NFY K   +E A  +FS +  LE D++ WN +I   ++ 
Sbjct: 222 GHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRM--LEKDVVTWNLLISGYVQI 279

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + + A+ +   M+  + +  S T+  ++ A A +     GK+ H Y +++ LES++ V 
Sbjct: 280 GEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVV 339

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           + ++ MY++  K+  A RVF+S    +L  WN+M++++  LG+   A +LF +M    + 
Sbjct: 340 SSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVP 399

Query: 495 PDIITWNCLLSGHFTHG------------------------------------SYQNVLT 518
           P++I+WN L+ G    G                                     Y+ +LT
Sbjct: 400 PNVISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILT 459

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
             R MQ  G +PN  S+  VL A   L  L+ GR  HGY++R+ L   + + TSL+DMY 
Sbjct: 460 FQR-MQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYA 518

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           K      A+ VFD + ++ +  +N++ISG+   G  V A  +   ++EE +KPD +++ +
Sbjct: 519 KCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTN 578

Query: 639 LVSGYSIWGQSKEAL-VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            +   S      E L + +  + N  I P++  +  ++S   +  +  E+      M   
Sbjct: 579 ALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAM--- 635

Query: 698 DIKPNSTTMSSLLQTC 713
             KP+   + SLL  C
Sbjct: 636 PYKPDVQILGSLLAAC 651



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 222/517 (42%), Gaps = 87/517 (16%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLK--SALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           ++LQ C    A H G+QIH  ++K  +    N  +   L+  Y++ +  E +  +F  ++
Sbjct: 15  ELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVR 74

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
             N+ SW +                             +I  NC        G YQ  L 
Sbjct: 75  LKNVFSWAA-----------------------------VIGLNC------RKGFYQEALL 99

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
             + MQ  G  P+   +  VL+A   L  ++ G+  HG ++  G  + ++ G        
Sbjct: 100 GFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVHG-LVSCGYVWKMWGGGGCKKGVC 158

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
                         M  RN VAWNS+I GY   GL   A ++  +M EE ++P  V+ +S
Sbjct: 159 G-------------MPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSS 205

Query: 639 LVSGYSIWG------QSKEALVI--IHHMKNSG-----------------------IYPN 667
            +S  +  G      Q     VI  I    N G                       +  +
Sbjct: 206 FLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKD 265

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           VVTW  LISG +Q     ++L     M+ E+++ +S T+++L+     +  L+ GKE HC
Sbjct: 266 VVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHC 325

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            C++N    D  V + ++DMY+K   +  AR VF  S  K L  WN M+  FA  G+  E
Sbjct: 326 YCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGE 385

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
           A+ LF+++      P+ I++ +L+    NSG V E    F  M +   + P +  ++ ++
Sbjct: 386 ALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQS-LGVQPNLVTWTTLI 444

Query: 848 DLLGKAGYLDEA---WDFIRTMPFKPD-ATIWGALLG 880
             L ++G+  EA   +  ++    KP+  +I G LL 
Sbjct: 445 SGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLA 481



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG--FIKDAYVATGLIDMYSKS 751
           M+ ++++        LLQ C     L  G++IH   +K G  F  + Y+ T L+  Y+K 
Sbjct: 1   MELKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC 60

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            N +++  +FR+   K + SW  +I      G  +EA+L F E+ E G  PD      +L
Sbjct: 61  DNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVL 120

Query: 812 AAC 814
            AC
Sbjct: 121 KAC 123



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 142/335 (42%), Gaps = 21/335 (6%)

Query: 232 SLIFHYLEFGDFTSAAKAFF----LYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           SLI  +L  G    A   F     L    +   W++ +      G   + +L  +  +  
Sbjct: 407 SLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAIL-TFQRMQE 465

Query: 288 KGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
            GV  +  +++II  L  C  L +  +G  +H  LI+      + +  +L++ Y KC D 
Sbjct: 466 AGV--KPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDR 523

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           + A ++F  + D E   ++N +I     + +   A+ L+R ++    K  + T    L A
Sbjct: 524 DQAKRVFDMIPDKELP-IYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYA 582

Query: 406 CAKVGAFHEGKQIH-GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLS 463
           C+      EG ++    V    +  ++    C++S+ SR   L+ A  +  +M    ++ 
Sbjct: 583 CSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQ 642

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII-TWNCLLSGHFTHGSYQNVLTLLRG 522
              S++++      +++   L N++   ++QPD    +  + + +   G +  V  + + 
Sbjct: 643 ILGSLLAACREHNKIELEEYLSNQL--LKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQL 700

Query: 523 MQSLGFR--PNGSSVSVVLQAVTELRLLKYGRESH 555
           M+  G R  P  S +    Q   EL +   G +SH
Sbjct: 701 MKERGLRKIPGCSWI----QVGEELNVFVAGDKSH 731


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Vitis vinifera]
          Length = 648

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/583 (34%), Positives = 320/583 (54%), Gaps = 32/583 (5%)

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            +S    P  S+ + +LQ+    + +K G++ H  +   G  +D  + T L+++Y   D L
Sbjct: 67   ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             +A+ +FD +   NI  WN LI GY + G +  A ++  QM +  + PD  ++  ++   
Sbjct: 127  SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 644  SIWGQSKEALVIIHHMKNSG-------------------------------IYPNVVTWT 672
            +     +    I  H+  +G                               +  + V W 
Sbjct: 187  AALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWN 246

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            S+++   QN +    L    +M    ++P   T+ + +        L  G+E+H L  + 
Sbjct: 247  SMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQ 306

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
             F     V T L+DMY+K G+++ AR +F +   K + SWN MI G+A++G+  EA+ LF
Sbjct: 307  EFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLF 366

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             E+     +PD ITF  +L+AC + GL+EEGW +F++M  DY I PT++HY+CMVDLLG 
Sbjct: 367  EEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGH 425

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            +G LDEA++ I  M   PD+ +WGALL SC+IH ++E  EIA  RL +LEP ++ NY ++
Sbjct: 426  SGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVIL 485

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + +WE V +LR  M +  +K  +  SWI++   VH F +    HP + EIY EL
Sbjct: 486  SNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSEL 545

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              +   MK+ GY P T  V+ D++++EK  ++ SH+E+LAI +GL+ T     + + KN 
Sbjct: 546  ERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNL 605

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH A K++S +  REI +RD  R+HHF++G CSC D W
Sbjct: 606  RICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 185/415 (44%), Gaps = 41/415 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C    A   G ++HA +   GF FD  +   L+N Y  C  + SA  LF  +    
Sbjct: 81  LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK-H 139

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +  LWN +I     N  +E A++L+ +M        + T   +L+ACA + A   G++IH
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            +V+++  E ++ V   LI MY++   +  A  VFD +                      
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI---------------------- 237

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                        +  D + WN +L+ +  +G     L+L   M   G RP  +++   +
Sbjct: 238 -------------LVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAI 284

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A  +   L  GRE HG   R   +    V T+L+DMY K   ++ A+ +F+ +  + +V
Sbjct: 285 SASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVV 344

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +WN++I+GY   G    A  +  +M     KPD +++  ++S  S  G  +E  +    M
Sbjct: 345 SWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETM 403

Query: 660 -KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            ++  I P V  +T ++     +    E+    +QM+   + P+S    +LL +C
Sbjct: 404 IRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMK---VLPDSGVWGALLNSC 455



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 18/357 (5%)

Query: 156 NQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHA 215
           NQ      P+       S  L PT +       SCI+            + +   K  HA
Sbjct: 51  NQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIAR-----------KAIKPGKQLHA 99

Query: 216 QMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR-SYADWSSFLEDYESFGGE 274
           Q+   G  +  D ++ + + +     D  S+A+  F    + +   W+  +  Y ++ G 
Sbjct: 100 QVCLAG--FGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGY-AWNGP 156

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            +  ++++ ++   G++  +     +LK C  L A   G E+H  +++ G++ DV +  A
Sbjct: 157 YEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAA 216

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ Y KC  V SA ++F ++  + D +LWN ++    +N   +  + L  EM  +  + 
Sbjct: 217 LIDMYAKCGCVGSAREVFDKIL-VRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRP 275

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T+V  + A A   A  +G+++HG   +   ES+  V   L+ MY++   + +A  +F
Sbjct: 276 TEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLF 335

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           + +    + SWN+MI+ Y   G+   A  LF +MN    +PD IT+  +LS   +HG
Sbjct: 336 ERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSA-CSHG 390


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
            chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 238/755 (31%), Positives = 388/755 (51%), Gaps = 81/755 (10%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D  +WN +I   + N  + +A+  +  M+F   +  + T   +++AC  +    EG+++H
Sbjct: 90   DTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVH 149

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G V+KS L+ ++ + N LI MY++                               +G ++
Sbjct: 150  GKVIKSGLDLDIYIGNSLIIMYAK-------------------------------IGCIE 178

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
             A  +F +M       D+++WN ++SG+ + G     L+  R MQ+ G + +  SV  +L
Sbjct: 179  SAEMVFREMPVR----DLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGIL 234

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A +    L+ G+E H  ++R+ L+ D+ V TSL+DMY K   +  A+ +FD + +++IV
Sbjct: 235  GACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIV 294

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPD-------------------------- 632
            AWN++I GY        +   + +M+E  ++ PD                          
Sbjct: 295  AWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGF 354

Query: 633  ---------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                     LV   +LV  Y   G+ K A  +   M       N+++W ++I+   +N  
Sbjct: 355  AIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNER----NLISWNAMIASYTKNGE 410

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
             R+++  F  +  + +KP++TT++S+L     L  L+  ++IH    K     + +V+  
Sbjct: 411  NRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNS 470

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            ++ MY K GNL  ARE+F +   K + SWN +IM +AI+G G+ +I LF E+ E GF+P+
Sbjct: 471  IVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPN 530

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
              TF +LL +C  +GLV EGW+YF+SM  DYNI P IEHY C++DL+G+ G LD A +FI
Sbjct: 531  GSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFI 590

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              MP  P A IWG+LL + R  G +E AEIA+  +  LE  N+  Y L+ N+ A + RWE
Sbjct: 591  EEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWE 650

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            DVER++  M + G++  +  S + +      F  +         +Y ++  ++S  KK+G
Sbjct: 651  DVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVY-DVLDIIS--KKIG 707

Query: 984  ---YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
               YV           E+++     SH+ +LAI +GL+ T    P+ V KN R+C  CH 
Sbjct: 708  EDVYVHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHR 767

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             AK +S    REI +RD   FHHF  G CSC D W
Sbjct: 768  FAKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 146/650 (22%), Positives = 273/650 (42%), Gaps = 109/650 (16%)

Query: 147 HHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRC 206
           + +N++   N +R        TN  T L L P                          R 
Sbjct: 9   YFYNSKRPRNASREKRARTPQTNPDTDLILKP--------------------------RI 42

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
             + +SK  Q   + +  NS  + ++L   Y+E G   +A   F          W+  + 
Sbjct: 43  FKTARSKRNQSFLVER--NSVSLTRALS-SYVERGYMKNALDLFENMRQCDTFIWNVMIR 99

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            +    G   + ++ +  +   GV   +     ++K C  L     G  VH  +IK G D
Sbjct: 100 GFVD-NGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLD 158

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D+++  +L+  Y K   +ESA  +F E+  + D + WN +I   +       ++  FRE
Sbjct: 159 LDIYIGNSLIIMYAKIGCIESAEMVFREMP-VRDLVSWNSMISGYVSVGDGWRSLSCFRE 217

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           MQ S  K    +++ +L AC+  G    GK+IH  +++S LE ++ V   L+ MY++  +
Sbjct: 218 MQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGR 277

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ A R+FD + D ++ +WN+MI  Y+              +N+   +            
Sbjct: 278 MDYAERLFDQITDKSIVAWNAMIGGYS--------------LNAQSFES----------- 312

Query: 507 HFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
                        +R MQ  G   P+  ++  +L    +L  +  G+  HG+ +RNG   
Sbjct: 313 ----------FAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLP 362

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            L + T+L+DMY +   L+ A+ +F  M  RN+++WN++I+ Y   G    A  +   + 
Sbjct: 363 HLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLC 422

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEA-------------------------------LV 654
            + +KPD  +  S++  Y+     +EA                               L+
Sbjct: 423 NKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLL 482

Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
               + +   + +V++W ++I     +   R S++ F +M+++  +PN +T  SLL +C 
Sbjct: 483 RAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCS 542

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATG------LIDMYSKSGNLKSAR 758
             GL+  G E       N   +D  +  G      ++D+  ++GNL  A+
Sbjct: 543 VAGLVNEGWEYF-----NSMKRDYNINPGIEHYGCILDLIGRTGNLDHAK 587



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 6/252 (2%)

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
           ++ + VS    +S Y   G  K AL +  +M+    +     W  +I G + N  + +++
Sbjct: 56  VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTF----IWNVMIRGFVDNGLFWDAV 111

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
            F+ +M+   ++ ++ T   +++ CGGL  L  G+ +H   +K+G   D Y+   LI MY
Sbjct: 112 DFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMY 171

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
           +K G ++SA  VFR+   + L SWN MI G+   G+G  ++  F E+  +G + D  +  
Sbjct: 172 AKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVI 231

Query: 809 ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            +L AC   G +  G +    M      +  +   S +VD+  K G +D A      +  
Sbjct: 232 GILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTS-LVDMYAKCGRMDYAERLFDQITD 290

Query: 869 KPDATIWGALLG 880
           K     W A++G
Sbjct: 291 K-SIVAWNAMIG 301


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 701

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/642 (34%), Positives = 350/642 (54%), Gaps = 38/642 (5%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            + + Y   G++  A  +F+++    +  +   WN ++ G+  + S    L L   M   G
Sbjct: 64   LAACYAVCGHMPYAQHIFDQI----VLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFG 119

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             +P+  +   VL+A  +L L + GR+ H  ++  GL+ D+YVG S++ MY K   ++ A+
Sbjct: 120  QKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAAR 179

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------ 641
             VFD M  R++ +WN+++SG+   G    A ++   M  +    D  +  +L+S      
Sbjct: 180  VVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVM 239

Query: 642  ----GYSIWG----QSKEALVIIHHMKNSGI--------------------YPNVVTWTS 673
                G  I G      +   V    + NS I                      +VV+W S
Sbjct: 240  DLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNS 299

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            LISG  +  +  ++L+ F +M      P+  T+ S+L  C  +  L+ G  +    +K G
Sbjct: 300  LISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRG 359

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            ++ +  V T LI MY+  G+L  A  VF +   K L +   M+ GF I+G G+EAI +F+
Sbjct: 360  YVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFY 419

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            E+L  G  PD   FTA+L+AC +SGLV+EG + F  M+ DY++ P   HYSC+VDLLG+A
Sbjct: 420  EMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRA 479

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            GYLDEA+  I  M  KP+  +W ALL +CR+H +++ A I++++LF+L P   + Y  + 
Sbjct: 480  GYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLS 539

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A   RWEDVE +R  + +  ++    +S+++++++VH F      H  + +IY +L 
Sbjct: 540  NIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLK 599

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L  ++KK GY PDT  V  D++EE K K+L  H+E+LA+ + L+ T     IR+ KN R
Sbjct: 600  DLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLR 659

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            VC DCHT  K +S +  REI +RD  RFHHFR+G CSC   W
Sbjct: 660  VCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 229/515 (44%), Gaps = 58/515 (11%)

Query: 313 GVEVHASLIKRG-FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
            +++HA +   G    + +L   L   Y  C  +  A  +F ++  L++  LWN +I   
Sbjct: 41  ALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIV-LKNSFLWNSMIRGY 99

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             N     A+ L+ +M     K  + T   +L+AC  +     G+++H  V+   LE ++
Sbjct: 100 ACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDV 159

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N ++SMY +   +E A  VFD M   +L+SWN+M+S +   G    A+ +F  M   
Sbjct: 160 YVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRD 219

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                                              GF  + +++  +L A  ++  LK G
Sbjct: 220 -----------------------------------GFVGDRTTLLALLSACGDVMDLKVG 244

Query: 552 RESHGYILRNGLDYDL---YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
           +E HGY++RNG    +   ++  S++DMY   + +  A+++F+ ++ +++V+WNSLISGY
Sbjct: 245 KEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGY 304

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
              G    A ++  +M      PD V+  S+++  +     +    +  ++   G   NV
Sbjct: 305 EKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNV 364

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE---I 725
           V  T+LI       +   + + F +M ++++ P  T M +      G G+   G+E   I
Sbjct: 365 VVGTALIGMYANCGSLVCACRVFDEMPEKNL-PACTVMVT------GFGIHGRGREAISI 417

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-----SANKTLASWNCMIMGFA 780
               L  G   D  + T ++   S SG +   +E+F K     S       ++C++    
Sbjct: 418 FYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLG 477

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             G   EA  +   +     +P+   +TALL+AC+
Sbjct: 478 RAGYLDEAYAVIENM---KLKPNEDVWTALLSACR 509



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 5/278 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S++  Y +FGD  +A   F     R    W++ +  +    GE +   EV+G++   G +
Sbjct: 164 SILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVK-NGEARGAFEVFGDMRRDGFV 222

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV---HLKCALMNFYGKCRDVESA 348
                L  +L  C  +M   +G E+H  +++ G    V    L  ++++ Y  C  V  A
Sbjct: 223 GDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCA 282

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            KLF E   ++D + WN +I    +      A++LF  M    A     T++ +L AC +
Sbjct: 283 RKLF-EGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQ 341

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           + A   G  +  YV+K     N+ V   LI MY+    L  A RVFD M + NL +   M
Sbjct: 342 ISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVM 401

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ +   G    A S+F +M    + PD   +  +LS 
Sbjct: 402 VTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSA 439



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 7/254 (2%)

Query: 221 GKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLE 280
           G++ N   ++ S+I  Y      + A K F     +    W+S +  YE  G   Q L E
Sbjct: 258 GRVCNGF-LMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQAL-E 315

Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
           ++G +   G +     +  +L  C ++ A  LG  V + ++KRG+  +V +  AL+  Y 
Sbjct: 316 LFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYA 375

Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR-NEKWENAIKLFREMQFSSAKAISRTI 399
            C  +  A ++F E+   E +L    +++     + +   AI +F EM            
Sbjct: 376 NCGSLVCACRVFDEMP--EKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIF 433

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
             +L AC+  G   EGK+I   + +  ++E   +  +CL+ +  R   L+ A  V ++MK
Sbjct: 434 TAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMK 493

Query: 459 -DHNLSSWNSMISS 471
              N   W +++S+
Sbjct: 494 LKPNEDVWTALLSA 507



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 7/133 (5%)

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGK------EIHCLCLKNGFIK-DAYVATGLIDMYSKSG 752
           KP+ST+    LQ    L  L N K      ++H      G ++ + Y+AT L   Y+  G
Sbjct: 13  KPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCG 72

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           ++  A+ +F +   K    WN MI G+A   +   A+ L+ ++L  G +PD  T+  +L 
Sbjct: 73  HMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLK 132

Query: 813 ACKNSGLVEEGWK 825
           AC +  L E G K
Sbjct: 133 ACGDLLLREMGRK 145


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  398 bits (1022), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 257/888 (28%), Positives = 426/888 (47%), Gaps = 93/888 (10%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGK 288
            +LI  Y + GD+  A   F    SR   D   W++ +       G   + + ++  L  +
Sbjct: 270  ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVE-AGRHGDAMAIFRRLRLE 328

Query: 289  GVIFRS-RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
            G+   S  ++TI+  L    + F      H  + + G+  DV +  A+++ Y KC    +
Sbjct: 329  GMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSA 388

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A  +F  +    D + WN ++      + +   +  F  M  +       + + +L AC+
Sbjct: 389  AWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACS 448

Query: 408  KVGAFHEGKQIHGYVL---KSALESNLSVCNCLISMYSRNNKLELATRVFDSMK--DHNL 462
               A   G++IH  +L   +  +ES  SV   L+SMY +   +  A  VF  M     +L
Sbjct: 449  NSEALDFGRKIHSLILTRRRDYVES--SVATMLVSMYGKCGSISEAELVFKEMPLPSRSL 506

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
             +WN M+ +Y        A+    +M    + PD +++  +LS  +     Q        
Sbjct: 507  VTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQ-------- 558

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                               V  + +L+ G  S              + T+L+ M+ +   
Sbjct: 559  -------------------VLRMCILESGYRSA------------CLETALISMHGRCRE 587

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------- 632
            L+ A+ VF+ M + ++V+W +++S       F     +  +M+ E + PD          
Sbjct: 588  LEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDT 647

Query: 633  -------------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                     +   N+L++ YS  G  +EAL     MK      +
Sbjct: 648  CLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR----D 703

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +V+W  + +   Q    +E++  F QMQ E +KP+  T S+ L   GG  L+ +GK  H 
Sbjct: 704  LVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHA 763

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            L  ++G   D  VATGL+ +Y+K G L  A  +FR + + T+   N +I   A +G  +E
Sbjct: 764  LAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEE 823

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ +F ++ + G +PD  T  ++++AC ++G+VEEG   F +M   + I PT+EHY+C V
Sbjct: 824  AVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFV 883

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG L+ A   IR MPF+ +  +W +LLG+C++ G  E  E  ++R+ +L+P NSA
Sbjct: 884  DLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSA 943

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             + ++ N+   + +W+D +  R  M +  VK+    SW +I + VH F A    HP T E
Sbjct: 944  AHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDE 1003

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY  L  L   M++ GY  D      D+++E K K L  H+E++AI +GL+ T     ++
Sbjct: 1004 IYVVLDKLELLMRRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLK 1060

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++KN RVC DCHTA KY+S+V GREI +RD  RFHHF  G CSC DCW
Sbjct: 1061 IVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 190/743 (25%), Positives = 325/743 (43%), Gaps = 80/743 (10%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMG--KIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLY 253
            LN     R L+  +S HA + ++G  +   +  +V  ++I  Y + G    A   F   
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAI 192

Query: 254 FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLG 313
             +    W++    Y        + L ++ E+  + +          L  CT L     G
Sbjct: 193 PEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---G 249

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED-DLL-WNEIIMVK 371
             +H+ L +    FD     AL+N YGKC D E A  +F  ++  ++ DL+ WN +I   
Sbjct: 250 TWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISAS 309

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESN 430
           +   +  +A+ +FR ++    +  S T++ +L A A  G  F   +  HG + +S    +
Sbjct: 310 VEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRD 369

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           + + N +ISMY++                                G+   AW++F ++  
Sbjct: 370 VVIGNAIISMYAK-------------------------------CGFFSAAWAVFRRI-- 396

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
            R + D+I+WN +L       S+  V+     M   G  PN  S   +L A +    L +
Sbjct: 397 -RWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDF 455

Query: 551 GRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISG 607
           GR+ H  IL    DY +  V T L+ MY K   +  A+ VF  M   +R++V WN ++  
Sbjct: 456 GRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA 515

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV------------------SGY------ 643
           Y        A   L +M +  + PD +S+ S++                  SGY      
Sbjct: 516 YAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLE 575

Query: 644 ----SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
               S+ G+ +E L     + N   + +VV+WT+++S + +N +++E    F +MQ E +
Sbjct: 576 TALISMHGRCRE-LEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGV 634

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            P+  T+++ L TC     L  GK IH    + G   D  V   L++MYS  G+ + A  
Sbjct: 635 IPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALS 694

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            F     + L SWN M   +A  G  KEA+LLF ++   G +PD +TF+  L     S L
Sbjct: 695 FFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSAL 754

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           V +G K F +++ +  +   +   + +V L  K G LDEA    R         +  A++
Sbjct: 755 VSDG-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRG-ACDWTVVLLNAII 812

Query: 880 GSCRIHGHLEYAEIASRRLFKLE 902
           G+   HG   ++E A +  +K++
Sbjct: 813 GALAQHG---FSEEAVKMFWKMQ 832



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 245/562 (43%), Gaps = 84/562 (14%)

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           T +L+ C        G   H  +   G +  + L   L+N Y +C  +E A+ +FS++ +
Sbjct: 29  TALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQF-SSAKAISRTIVKMLQACAKVGAFHEGK 416
             + + W  +I    +   +  A  LFR M   SSA   S T+V ML ACA       G+
Sbjct: 89  -RNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 417 QIHGYVLKSALESNLS----VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            IH  + +  LE   +    V N +I+MY++   LE A  VF ++ + ++ SW +M  +Y
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                              R  PD                    L + R M      PN 
Sbjct: 208 A---------------QERRFYPD-------------------ALRIFREMLLQPLAPNV 233

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            +    L A T LR    G   H  +    L +D     +L++MY K    + A  VF  
Sbjct: 234 ITFITALGACTSLR---DGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKA 290

Query: 593 MKNR---NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS----- 644
           M +R   ++V+WN++IS     G   +A  +  ++  E ++P+ V+  ++++  +     
Sbjct: 291 MASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD 350

Query: 645 ----------IW--GQSKEALV---IIHHMKNSGIYP-------------NVVTWTSLIS 676
                     IW  G  ++ ++   II      G +              +V++W +++ 
Sbjct: 351 FGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLG 410

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL--KNGF 734
            S   +++ + +  F  M    I PN  +  ++L  C     L  G++IH L L  +  +
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKS--ANKTLASWNCMIMGFAIYGNGKEAILLF 792
           ++ + VAT L+ MY K G++  A  VF++    +++L +WN M+  +A     KEA    
Sbjct: 471 VESS-VATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGAL 529

Query: 793 HELLETGFQPDAITFTALLAAC 814
            E+L+ G  PDA++FT++L++C
Sbjct: 530 MEMLQGGVLPDALSFTSVLSSC 551



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 175/417 (41%), Gaps = 53/417 (12%)

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
            GS    L  L G   +    +    + +LQ+  +   L  G+ +H  I   GL+  L++
Sbjct: 3   RGSIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFL 62

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA------------ 617
           G  L++MYV+   L+ A  +F  M+ RN+V+W +LIS     G F  A            
Sbjct: 63  GNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESS 122

Query: 618 --------KKMLNQ---------------------MEEEEIKPDLVSWNSLVSGYSIWGQ 648
                     MLN                      +E       LV  N++++ Y+  G 
Sbjct: 123 AAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVG-NAMINMYAKCGS 181

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN-YRESLKFFIQMQQEDIKPNSTTMS 707
            ++A+ +   +       +VV+WT++     Q    Y ++L+ F +M  + + PN  T  
Sbjct: 182 LEDAIAVFLAIPE----KDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFI 237

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           + L  C     L++G  +H L  +     D   +  LI+MY K G+ + A  VF+  A++
Sbjct: 238 TALGACTS---LRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASR 294

Query: 768 T---LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
               L SWN MI      G   +A+ +F  L   G +P+++T   +L A   SG+     
Sbjct: 295 QELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAA 354

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
           + F     +   +  +   + ++ +  K G+   AW   R + +K D   W  +LG+
Sbjct: 355 RGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 134/304 (44%), Gaps = 39/304 (12%)

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
           N L++ Y   G  +EA  I   M+      NVV+WT+LIS + Q   +  +   F  M  
Sbjct: 64  NCLINMYVRCGSLEEAHAIFSKMEER----NVVSWTALISANAQCGAFARAFALFRTMLL 119

Query: 697 ED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT----GLIDMYSKS 751
           E    PNS T+ ++L  C     L  G+ IH +  + G  + +  AT     +I+MY+K 
Sbjct: 120 ESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKC 179

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFA----IYGNGKEAILLFHELLETGFQPDAITF 807
           G+L+ A  VF     K + SW  M   +A     Y    +A+ +F E+L     P+ ITF
Sbjct: 180 GSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFY---PDALRIFREMLLQPLAPNVITF 236

Query: 808 TALLAACKN-------SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
              L AC +         L+ E    FD ++++            ++++ GK G  + A+
Sbjct: 237 ITALGACTSLRDGTWLHSLLHEASLGFDPLASN-----------ALINMYGKCGDWEGAY 285

Query: 861 DFIRTMPFKP--DATIWGALLGSCRIHG-HLEYAEIASR-RLFKLEPCNSANYNLMMNLL 916
              + M  +   D   W A++ +    G H +   I  R RL  + P NS     ++N L
Sbjct: 286 SVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRP-NSVTLITILNAL 344

Query: 917 AMSN 920
           A S 
Sbjct: 345 AASG 348


>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 248/775 (32%), Positives = 404/775 (52%), Gaps = 48/775 (6%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS-SFLEDYESFG 272
           HA +IK G  +++++ V+S +       + T  A  FF    ++   +S + +   ++  
Sbjct: 126 HAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARN 185

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD--VH 330
           G  +E L  + E+  KG    + ++   LK C  L     G  +H  ++K G +FD  V+
Sbjct: 186 GLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVY 245

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           +  +L++ YGKC  +E A K+F E+ + + +D++WN +I+  ++N     A+ LF +M+F
Sbjct: 246 VATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRF 305

Query: 390 SSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                 S  ++     ACA + A  EGKQ H  V+    E N  + + +++ YS+   +E
Sbjct: 306 EGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIE 365

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
               VF SM                                   +  D +TWN ++S + 
Sbjct: 366 EVELVFRSMA----------------------------------VLKDEVTWNLMISSYV 391

Query: 509 THGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
             G ++  L +   M +    R +  ++S +L    + R +K G++ HG+ +RN    D+
Sbjct: 392 QFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDM 451

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFD-NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            V + ++DMY K   +  A+ VF    K ++IV WN++++    KGL   A K+  QM+ 
Sbjct: 452 AVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQM 511

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
           E + P++VSWNSL+ G+   GQ  EA  +   M+ SG+ PN++TWT++ISG  QN    E
Sbjct: 512 ESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYE 571

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           + + F QMQ   ++PNS +++S L  C  + LL  G+ IH   ++N       + T +ID
Sbjct: 572 ASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIID 631

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
           MY+K GNL  A+ VF   + K L  +N MI  +A +G   EA+ LF EL++ G  PD IT
Sbjct: 632 MYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHIT 691

Query: 807 FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
           FT++L+AC +  L++EG + F  M  +  + P+ +HY C+V LL   G LDEA   I TM
Sbjct: 692 FTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTM 751

Query: 867 PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
           P  PDA I G+LL +C  +   E A   ++ L K+EP N  NY  + N+ A   +W++V 
Sbjct: 752 PSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDEVS 811

Query: 927 RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY-------FELYH 974
            +R  M E G+K +   SWI++ Q ++VF A    HP   EIY       FE+Y+
Sbjct: 812 NIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSHPEKEEIYKILDLLGFEMYY 866



 Score =  185 bits (469), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 164/643 (25%), Positives = 295/643 (45%), Gaps = 61/643 (9%)

Query: 126 GSSQLTRQNTAIVMPKLHSIYHHFN-TRTSINQNRHSHKPNSITNSPTSLALPPTDTLAK 184
           GSS  T +    V  KL  +Y   N TR +++  R+  K  ++ +    + L   + L K
Sbjct: 133 GSSYSTNE---FVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYK 189

Query: 185 QAQLSCIS---SGFC--------FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVK-S 232
           +A LS +     GFC         L      R +   +  H  ++KMG  ++    V  S
Sbjct: 190 EALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATS 249

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYAD--WSSFLEDYESFGGEVQELLEVWGELHGKGV 290
           L+  Y + G    A K F    +R   D  W+S +  Y   G  V E + ++ ++  +G 
Sbjct: 250 LVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNV-EAVGLFEKMRFEGG 308

Query: 291 IFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
           +  S + L+     C  L A   G + HA +I  GF+ +  L  ++MNFY K   +E   
Sbjct: 309 VEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVE 368

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAK 408
            +F  ++ L+D++ WN +I   ++   +E A+++   M +  + +    T+  +L   A 
Sbjct: 369 LVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAAD 428

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF-------------- 454
                 GK++HG+ +++   S+++V + ++ MY++   ++ A  VF              
Sbjct: 429 TRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNT 488

Query: 455 ------------DSMK----------DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
                       +++K            N+ SWNS+I  +   G V  A  +F++M  S 
Sbjct: 489 MLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSG 548

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           + P++ITW  ++SG   +G       + + MQ  G RPN  S++  L A T + LL YGR
Sbjct: 549 VTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGR 608

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             HGY++RN + + L + TS++DMY K   L +A+ VF     + +  +N++IS Y   G
Sbjct: 609 SIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHG 668

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTW 671
               A  +  ++ ++ I PD +++ S++S  S     KE L +  +M     + P+   +
Sbjct: 669 KSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHY 728

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
             L+     +    E+L+  + M      P++  + SLL  CG
Sbjct: 729 GCLVKLLTNDGQLDEALRIILTMPS---PPDAHILGSLLAACG 768



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 148/627 (23%), Positives = 267/627 (42%), Gaps = 107/627 (17%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVH--LKCALMNFYGKCRDVESANKLFSEVSD 357
           +L+ C       LG+++HA LIK+G  +  +  ++  L+  Y KC     A   F  V  
Sbjct: 109 LLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVK 168

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
            ++   +  I+ ++ RN  ++ A+  + EM        +  +   L+AC  +     G+ 
Sbjct: 169 NQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRG 228

Query: 418 IHGYVLKSALESN--LSVCNCLISMYSRNNKLELATRVFDSM--KDHNLSSWNSMISSYT 473
           IHG+V+K   E +  + V   L+ MY +   LE A +VFD M  +  N   WNSMI  Y 
Sbjct: 229 IHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYV 288

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G    A  LF KM                                 G    G  P+  
Sbjct: 289 QNGMNVEAVGLFEKMR------------------------------FEG----GVEPSEV 314

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           S+S    A   L  ++ G++ H  ++  G + +  +G+S+M+ Y K   ++  + VF +M
Sbjct: 315 SLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSM 374

Query: 594 KN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE-IKPDLVSWNSLVS---------- 641
              ++ V WN +IS Y   G+F  A +M + M EEE ++ D V+ +SL++          
Sbjct: 375 AVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKL 434

Query: 642 -----GYSIWGQSKEALVIIHHMKN-----------------SGIYPNVVTWTSLISGSL 679
                G+ I  +    + ++  + +                 +G   ++V W ++++   
Sbjct: 435 GKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACA 494

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
           +     E+LK F QMQ E + PN  + +SL+      G  +NG+ +              
Sbjct: 495 EKGLSGEALKLFFQMQMESVPPNVVSWNSLI-----FGFFRNGQVVEAQ----------- 538

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
                 DM+S         E+        L +W  MI G A  G G EA  +F ++   G
Sbjct: 539 ------DMFS---------EMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAG 583

Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
            +P++I+ T+ L+AC N  L+  G      +  ++    +++  + ++D+  K G LD+A
Sbjct: 584 MRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSF-SLQITTSIIDMYAKCGNLDDA 642

Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHG 886
             F+  +    +  ++ A++ +   HG
Sbjct: 643 -KFVFIICSTKELPVYNAMISAYASHG 668



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 250/565 (44%), Gaps = 84/565 (14%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIV-KMLQACAKVGAFHEGKQIHGYVLK--SALES 429
           +N K + AI      Q      I   I  ++LQ C        G QIH +++K  S+  +
Sbjct: 81  KNLKLQEAISTLS--QLPQHTPIGPDIYGELLQGCVYARDLSLGLQIHAHLIKKGSSYST 138

Query: 430 NLSVCNCLISMYSRNNKLELATRVF-DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           N  V + L+ +Y++ N   +A   F + +K+ NL S+ +++    GL             
Sbjct: 139 NEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIV----GL------------- 181

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                                +G Y+  L     M   GF P+   V   L+A   LR +
Sbjct: 182 ------------------QARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWI 223

Query: 549 KYGRESHGYILRNGLDYD--LYVGTSLMDMYVKNDCLQNAQEVFDNMKN--RNIVAWNSL 604
            +GR  HG++++ G ++D  +YV TSL+DMY K   L++A++VFD M N  RN V WNS+
Sbjct: 224 GFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSM 283

Query: 605 ISGYCFKGLFVNAKKMLNQME-EEEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHH 658
           I GY   G+ V A  +  +M  E  ++P  VS +   S  +       G+   ALVI+  
Sbjct: 284 IVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMG 343

Query: 659 ---------------------------MKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
                                       ++  +  + VTW  +IS  +Q   + ++L+  
Sbjct: 344 FELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMC 403

Query: 692 IQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
             M ++E+++ +  T+SSLL        ++ GK++H  C++N F  D  V +G++DMY+K
Sbjct: 404 HWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAK 463

Query: 751 SGNLKSAREVFRKSANKT-LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
            G +  AR VF  +  K  +  WN M+   A  G   EA+ LF ++      P+ +++ +
Sbjct: 464 CGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNS 523

Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP-- 867
           L+     +G V E    F  M     + P +  ++ M+  L + G   EA    + M   
Sbjct: 524 LIFGFFRNGQVVEAQDMFSEMQLS-GVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGA 582

Query: 868 -FKPDATIWGALLGSCRIHGHLEYA 891
             +P++    + L +C     L Y 
Sbjct: 583 GMRPNSISITSALSACTNMALLNYG 607


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/580 (35%), Positives = 332/580 (57%), Gaps = 39/580 (6%)

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N + V  +LQ       +   +  HG I+R  L+ D+ +   L++ Y K   ++ A++VF
Sbjct: 60   NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------- 642
            D M  R++V+WN++I  Y    +   A  +  +M  E  K    + +S++S         
Sbjct: 120  DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179

Query: 643  ---------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                                       Y+  G  K+A+ +   M++     + VTW+S++
Sbjct: 180  ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK----SSVTWSSMV 235

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            +G +QN+NY E+L  + + Q+  ++ N  T+SS++  C  L  L  GK++H +  K+GF 
Sbjct: 236  AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             + +VA+  +DMY+K G+L+ +  +F +   K L  WN +I GFA +   KE ++LF ++
Sbjct: 296  SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
             + G  P+ +TF++LL+ C ++GLVEEG ++F  M T Y + P + HYSCMVD+LG+AG 
Sbjct: 356  QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L EA++ I+++PF P A+IWG+LL SCR++ +LE AE+A+ +LF+LEP N+ N+ L+ N+
Sbjct: 416  LSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNI 475

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A + +WE++ + R  + +  VK V   SWI I   VH FS   + HP   EI   L +L
Sbjct: 476  YAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 535

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
            V + +K GY P       D++  +K ++L+ H+EKLA+V+GLM     +P+R++KN R+C
Sbjct: 536  VIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRIC 595

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH   K  S+   R I +RD  RFHHF +G CSC D W
Sbjct: 596  VDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 198/422 (46%), Gaps = 54/422 (12%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL+LC +  A       H  +I+   + DV L   L+N Y KC  VE A ++F  +  LE
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM--LE 124

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
             L+ WN +I +  RN     A+ +F EM+    K    TI  +L AC       E K++
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H   +K+ ++ NL V   L+ +Y++   ++ A +VF+SM+D +                 
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS----------------- 227

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                              +TW+ +++G+  + +Y+  L L R  Q +    N  ++S V
Sbjct: 228 ------------------SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 269

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           + A + L  L  G++ H  I ++G   +++V +S +DMY K   L+ +  +F  ++ +N+
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
             WN++ISG+           +  +M+++ + P+ V+++SL+S     G  +E       
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389

Query: 659 MKNS-GIYPNVVTWTSLIS----GSLQNENYR--ESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           M+ + G+ PNVV ++ ++       L +E Y   +S+ F          P ++   SLL 
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF---------DPTASIWGSLLA 440

Query: 712 TC 713
           +C
Sbjct: 441 SC 442



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 204/440 (46%), Gaps = 78/440 (17%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           ++LQ CA+ GA  E K  HG +++  LE ++++ N LI+ YS+   +ELA +VFD M + 
Sbjct: 66  EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           +L SWN+MI  YT            N+M S                          L + 
Sbjct: 126 SLVSWNTMIGLYTR-----------NRMES------------------------EALDIF 150

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M++ GF+ +  ++S VL A          ++ H   ++  +D +LYVGT+L+D+Y K 
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAKKM---LNQMEEEEIK 630
             +++A +VF++M++++ V W+S+++GY           L+  A++M    NQ     + 
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270

Query: 631 PDLVSWNSLVSG-------------------------YSIWGQSKEALVIIHHMKNSGIY 665
               +  +L+ G                         Y+  G  +E+ +I   ++     
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK--- 327

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            N+  W ++ISG  ++   +E +  F +MQQ+ + PN  T SSLL  CG  GL++ G+  
Sbjct: 328 -NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386

Query: 726 HCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYG 783
             L     G   +    + ++D+  ++G L  A E+ +    + T + W  ++    +Y 
Sbjct: 387 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYK 446

Query: 784 NGKEAILLFHELLETGFQPD 803
           N + A +   +L E   +P+
Sbjct: 447 NLELAEVAAEKLFE--LEPE 464



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 166/357 (46%), Gaps = 9/357 (2%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K+ H ++I++  +     ++  LI  Y + G    A + F     RS   W++ +  Y  
Sbjct: 81  KACHGKIIRI-DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
              E  E L+++ E+  +G  F    ++ +L  C          ++H   +K   D +++
Sbjct: 140 NRME-SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  AL++ Y KC  ++ A ++F  + D +  + W+ ++   ++N+ +E A+ L+R  Q  
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQD-KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 257

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           S +    T+  ++ AC+ + A  EGKQ+H  + KS   SN+ V +  + MY++   L  +
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             +F  +++ NL  WN++IS +           LF KM    + P+ +T++ LLS     
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377

Query: 511 GSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
           G  +      + M++  G  PN    S ++  +    LL     S  Y L   + +D
Sbjct: 378 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL-----SEAYELIKSIPFD 429



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 12/211 (5%)

Query: 696 QEDIKP--------NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           QE++ P        N   +  +LQ C   G +   K  H   ++     D  +   LI+ 
Sbjct: 46  QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 105

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           YSK G ++ AR+VF     ++L SWN MI  +       EA+ +F E+   GF+    T 
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165

Query: 808 TALLAACK-NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
           +++L+AC  N   +E   K    +S    I   +   + ++DL  K G + +A     +M
Sbjct: 166 SSVLSACGVNCDALE--CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 223

Query: 867 PFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
             K   T W +++     + + E A +  RR
Sbjct: 224 QDKSSVT-WSSMVAGYVQNKNYEEALLLYRR 253


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/714 (32%), Positives = 362/714 (50%), Gaps = 75/714 (10%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            R+   + +AC K+ +  +G+  H  + ++       + N ++ MY +   L  A +VFD 
Sbjct: 11   RSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDE 70

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M++ NL                                   ++WN ++S +  +G +   
Sbjct: 71   MRERNL-----------------------------------VSWNTIISAYAENGVFDKG 95

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
              +   M  L  +PNGS+    L+++     L+ G++ H + +R+GL  +  V T++ +M
Sbjct: 96   FCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNM 155

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---- 632
            YVK   L+ A+ VF+ M  +N VAW  ++ GY      ++A  +  +M  E ++ D    
Sbjct: 156  YVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVF 215

Query: 633  ------LVSWNSLVSGYSIWGQ----------SKEALVIIHHMKNSGIY----------- 665
                        L  G  I G           S    ++  ++K S +            
Sbjct: 216  SIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISE 275

Query: 666  PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            PN V+W++LI+G  Q   + E+LK F  ++   +  NS T +S+ Q C  L    +G + 
Sbjct: 276  PNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQA 335

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            H   +K+  +   +  + +I MYS+ G L  A  VF    +    +W  +I G+A  GN 
Sbjct: 336  HADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNA 395

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
             EA+ LF  + + G +P+A+TF A+L AC +SGLV EG +Y +SMS++Y +  TI+HY C
Sbjct: 396  PEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDC 455

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            MVD+  +AG+L EA + IR+MPF PDA  W  LLG C  + +LE  E+A+  LF+L+P +
Sbjct: 456  MVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPED 515

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            +A Y LM NL A   +W++   +R  M E  ++  L  SWI +   VH F      HP T
Sbjct: 516  TAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQT 575

Query: 966  GEIYFELYHLVSEMKK--LGYVPDTRCVYQDIDEE--EKGKVLLSHTEKLAIVYGLMKTK 1021
             EIY +L  L   + K   G + +     +D+     E+ + LL H+E+LA+ +GL+ T 
Sbjct: 576  EEIYSKLEALNDSVIKEETGLLTE-----EDVSNSLPERKEQLLVHSERLALAFGLISTP 630

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S AP+ V KN R C DCH   K +SL+ GREI +RD  RFHHF+ GECSCND W
Sbjct: 631  SSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 234/537 (43%), Gaps = 77/537 (14%)

Query: 285 LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           +   G+    R    + + C K+ + + G   H  + +   +    L+ +++  Y KC  
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           +  A K+F E+ +  + + WN II     N  ++    +F  M     K    T +  L+
Sbjct: 61  LADARKVFDEMRE-RNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLR 119

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           +         GKQIH + ++S L SN SV   + +MY +   LE A  VF+ M + N  +
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           W  ++  YT       A +LF KM +  ++ D   +                        
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVF------------------------ 215

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
                      S+VL+A   L  L +GR+ HG+I++ GL+ ++ VGT L+D YVK   L+
Sbjct: 216 -----------SIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLE 264

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN---------------------- 622
           +A + F+ +   N V+W++LI+GYC  G F  A K                         
Sbjct: 265 SATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACS 324

Query: 623 ---------QMEEEEIKPDLVSW----NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                    Q   + IK  LV++    +++++ YS  G+   A  +   + +    P+ V
Sbjct: 325 ALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDD----PDAV 380

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCL 728
            WT++I+G     N  E+LK F +MQ   ++PN+ T  ++L  C   GL+  G++ +  +
Sbjct: 381 AWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESM 440

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGN 784
               G          ++D+YS++G L+ A E+ R    +    SW C++ G   Y N
Sbjct: 441 SSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRN 497



 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 181/408 (44%), Gaps = 35/408 (8%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M+  G   +  S   + +A  +++ L  GR  H  + R   +   ++  S++ MY K   
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------- 632
           L +A++VFD M+ RN+V+WN++IS Y   G+F     M + M E E KP+          
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY---------------------PNVVTW 671
           L++ + L  G  I   +  + +  +   N+ I                       N V W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
           T ++ G  Q E   ++L  F +M  E ++ +    S +L+ C GL  L  G++IH   +K
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            G   +  V T L+D Y K  NL+SA + F   +     SW+ +I G+   G  +EA+  
Sbjct: 241 LGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKT 300

Query: 792 FHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLL 850
           F  L       ++ T+T++  AC        G + + D++ +  +++      S M+ + 
Sbjct: 301 FESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKS--SLVAYQHGESAMITMY 358

Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
            + G LD A     ++   PDA  W A++      G+   A    RR+
Sbjct: 359 SRCGRLDYATRVFESID-DPDAVAWTAIIAGYAYQGNAPEALKLFRRM 405



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/590 (21%), Positives = 253/590 (42%), Gaps = 73/590 (12%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYF 254
           C      K + L   +  H QM +  K  N  + ++ S++  Y + G    A K F    
Sbjct: 15  CLFEACGKIKSLFDGRLFHEQMQRTVK--NPPEFLENSVLKMYCKCGSLADARKVFDEMR 72

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI-----------ILKL 303
            R+   W++ +  Y   G            +  KG    S +L +            L+ 
Sbjct: 73  ERNLVSWNTIISAYAENG------------VFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
                   +G ++H+  I+ G   +  +  A+ N Y KC  +E A  +F ++S+ ++ + 
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSE-KNAVA 179

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  I++   + E+  +A+ LF +M     +        +L+ACA +   + G+QIHG+++
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV 239

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           K  LES +SV   L+  Y + + LE AT+ F+         W S                
Sbjct: 240 KLGLESEVSVGTPLVDFYVKCSNLESATKAFE---------WIS---------------- 274

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                     +P+ ++W+ L++G+   G ++  L     +++     N  + + + QA +
Sbjct: 275 ----------EPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACS 324

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            L     G ++H   +++ L    +  ++++ MY +   L  A  VF+++ + + VAW +
Sbjct: 325 ALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTA 384

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNS 662
           +I+GY ++G    A K+  +M++  ++P+ V++ ++++  S  G   E    +  M  N 
Sbjct: 385 IIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNY 444

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           G+   +  +  ++    +    +E+L+    M      P++ +   LL  C     L+ G
Sbjct: 445 GVATTIDHYDCMVDIYSRAGFLQEALELIRSMP---FSPDAMSWKCLLGGCWTYRNLEIG 501

Query: 723 KEIHCLCLKNGFIKDAYVATGLI---DMYSKSGNLKSAREVFRKSANKTL 769
           +    L  +N F  D     G I   ++Y+  G  K A  V +  A + L
Sbjct: 502 E----LAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNL 547


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/809 (29%), Positives = 390/809 (48%), Gaps = 78/809 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            + +LC    A   G+   A    R   F + L  A+++   +  +   A ++F+++ +  
Sbjct: 100  LFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPE-R 158

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            D   WN ++    +    E A+ L+  M ++  +    T   +L++C  V  +  G+++H
Sbjct: 159  DVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVH 218

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             +VL+      + V N L++MY++   +  A +VFD                        
Sbjct: 219  AHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFD------------------------ 254

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                       S    D I+WN +++GHF +G     L L   M     +PN  +++ V 
Sbjct: 255  -----------SMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVT 303

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             A   L  + + +E HG  ++ G   D+    SL+ MY     +  A+ VF  M  R+ +
Sbjct: 304  VASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAM 363

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--------------------------- 632
            +W ++ISGY   G    A ++   ME   + PD                           
Sbjct: 364  SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 423

Query: 633  --------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                    +V  N+L+  Y+   +  +A+ +   M       +VV+W+S+I+G   N   
Sbjct: 424  ESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEK----DVVSWSSMIAGFCFNHRN 479

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L +F  M   D+KPNS T  + L  C   G L++GKEIH   L+ G   + Y+   L
Sbjct: 480  FEALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNAL 538

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            ID+Y K G    A   F     K + SWN MI GF  +GNG+ A+  F+++++ G  PD 
Sbjct: 539  IDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDE 598

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF ALL AC   G+V EGW+ F SM+  Y+I+P ++HY+CMVDLL + G L EA++FI 
Sbjct: 599  VTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFIN 658

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP  PDA +WGALL  CRIH H+E  E+A++ + +LEP ++  + L+ +L A +  W+ 
Sbjct: 659  EMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDK 718

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            + R+R +M E G+      SW+++  +VH F  +   HP   EI   L  +   MK  G 
Sbjct: 719  LARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGC 778

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
             P     +   D+  K  +   H+E+LA+ +GL+ T     I V KN   C  CH   K 
Sbjct: 779  APVES--HSPEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKM 836

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCND 1073
            +S +  R+I +RD  + HHF++G CSC D
Sbjct: 837  ISYIVRRDIIVRDSKQVHHFKDGSCSCGD 865



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 213/504 (42%), Gaps = 43/504 (8%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           +  HA +++ G      D++ +L+  Y + GD  +A K F          W++ +  +  
Sbjct: 215 REVHAHVLRFG-FAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFE 273

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             GE    LE++  +    V      +T +      L       E+H   +KRGF  DV 
Sbjct: 274 -NGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVA 332

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
              +L+  Y     +  A  +FS + D  D + W  +I    +N   + A++++  M+ +
Sbjct: 333 FCNSLIQMYASLGMMGQARTVFSRM-DTRDAMSWTAMISGYEKNGFPDKALEVYALMEVN 391

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           +      TI   L ACA +G+   G ++H         S + V N L+ MY+++ +++ A
Sbjct: 392 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKA 451

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             VF  M + ++ SW+SMI+ +                                   F H
Sbjct: 452 IEVFKCMPEKDVVSWSSMIAGFC----------------------------------FNH 477

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
            +++  L   R M +   +PN  +    L A      L+ G+E H ++LR G+ Y+ Y+ 
Sbjct: 478 RNFE-ALYYFRHMLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLP 535

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            +L+D+YVK      A   F     +++V+WN +I+G+   G    A    NQM +    
Sbjct: 536 NALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGEC 595

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLK 689
           PD V++ +L+   S  G   E   + H M +   I PN+  +  ++    +     E+  
Sbjct: 596 PDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYN 655

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
           F  +M    I P++    +LL  C
Sbjct: 656 FINEMP---ITPDAAVWGALLNGC 676



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 6/299 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           ++  K  H   +K G  + +D     SLI  Y   G    A   F    +R    W++ +
Sbjct: 312 ITFAKEMHGLAVKRG--FATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMI 369

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             YE   G   + LEV+  +    V      +   L  C  L +  +GV++H     +GF
Sbjct: 370 SGYEK-NGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 428

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
              V +  AL+  Y K + ++ A ++F  + + +D + W+ +I     N +   A+  FR
Sbjct: 429 MSYVVVTNALLEMYAKSKRIDKAIEVFKCMPE-KDVVSWSSMIAGFCFNHRNFEALYYFR 487

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            M  +  K  S T +  L ACA  GA   GK+IH +VL+  +     + N LI +Y +  
Sbjct: 488 HM-LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCG 546

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           +   A   F +    ++ SWN MI+ +   G  + A S FN+M      PD +T+  LL
Sbjct: 547 QTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALL 605


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 775

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/742 (32%), Positives = 382/742 (51%), Gaps = 68/742 (9%)

Query: 364  WNEIIMVKLR-NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
            WN I+   L        A+  ++    S AK  S T   +LQ CA   +  EG+Q+H + 
Sbjct: 72   WNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHA 131

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
            + S  + ++ V N L+++Y+    +  A RVF+     +L SWN++++ Y   G V+ A 
Sbjct: 132  VSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAE 191

Query: 483  SLFNKM----------------------NSSRI-------QPDIITWNCLLSGHFTHGSY 513
             +F  M                       + RI       + D+++W+ ++S +  +   
Sbjct: 192  RVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMG 251

Query: 514  QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
            +  L L   M+  G   +   V   L A + +  ++ GR  HG  ++ G++  + +  +L
Sbjct: 252  EEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNAL 311

Query: 574  MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            + +Y     + +A+ +FD+                          ++L          DL
Sbjct: 312  IHLYSSCGEIVDARRIFDD------------------------GGELL----------DL 337

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
            +SWNS++SGY   G  ++A ++ + M       +VV+W+++ISG  Q+E + E+L  F +
Sbjct: 338  ISWNSMISGYLRCGSIQDAEMLFYSMPEK----DVVSWSAMISGYAQHECFSEALALFQE 393

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            MQ   ++P+ T + S +  C  L  L  GK IH    +N    +  ++T LIDMY K G 
Sbjct: 394  MQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGC 453

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            +++A EVF     K +++WN +I+G A+ G+ ++++ +F ++ +TG  P+ ITF  +L A
Sbjct: 454  VENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGA 513

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C++ GLV +G  YF+SM  ++ I   I+HY CMVDLLG+AG L EA + I +MP  PD  
Sbjct: 514  CRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVA 573

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
             WGALLG+CR H   E  E   R+L +L+P +   + L+ N+ A    W +V  +R  M 
Sbjct: 574  TWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMA 633

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
            + GV      S I+ +  VH F A    HP   +I   L  + +++K  GYVP T  V  
Sbjct: 634  QHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSL 693

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            DIDEEEK   L  H+EKLA+ +GL+      PIRV KN R+C+DCHT  K +S    R+I
Sbjct: 694  DIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDI 753

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD  RFHHF+ G CSC D W
Sbjct: 754  VVRDRHRFHHFKHGACSCMDFW 775



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 210/441 (47%), Gaps = 46/441 (10%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           +++  +G+   VE A ++F+ V   E D++ W+ ++    +NE  E A+ LF EM+ S  
Sbjct: 207 SMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGV 266

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                 +V  L AC++V     G+ +HG  +K  +E  +S+ N LI +YS   ++  A R
Sbjct: 267 AVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARR 326

Query: 453 VFDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           +FD   +  +L SWNSMIS Y   G +  A  LF  M     + D+++W+ ++SG+  H 
Sbjct: 327 IFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMP----EKDVVSWSAMISGYAQHE 382

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
            +   L L + MQ  G RP+ +++   + A T L  L  G+  H YI RN L  ++ + T
Sbjct: 383 CFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILST 442

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DMY+K  C++NA EVF  M+ + +  WN++I G    G    +  M   M++    P
Sbjct: 443 TLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVP 502

Query: 632 DLVS--------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIY------ 665
           + ++                    +NS++  + I    K    ++  +  +G+       
Sbjct: 503 NEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEEL 562

Query: 666 -------PNVVTWTSLISGSLQ---NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                  P+V TW +L+    +   NE      +  IQ+Q  D       +S++  + G 
Sbjct: 563 IDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQP-DHDGFHVLLSNIYASKGN 621

Query: 716 LGLLQNGKEIHCLCLKNGFIK 736
            G   N  EI  +  ++G +K
Sbjct: 622 WG---NVLEIRGIMAQHGVVK 639



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/501 (22%), Positives = 221/501 (44%), Gaps = 54/501 (10%)

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           S L+S L  C C        ++  L   + D      L +++S  ++     Y   +  +
Sbjct: 4   STLDSLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHY---SLRI 60

Query: 485 FNKMNSSRIQPDIITWNCLLSGH-FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           FN + +    P+  TWN ++  H +   S    L   +   +   +P+  +  ++LQ   
Sbjct: 61  FNHLRN----PNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCA 116

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
                  GR+ H + + +G D D+YV  +LM++Y     + +A+ VF+     ++V+WN+
Sbjct: 117 ARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNT 176

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
           L++GY   G    A+++   M E     + ++ NS+++ +   G  ++A  I + ++  G
Sbjct: 177 LLAGYVQAGEVEEAERVFEGMPER----NTIASNSMIALFGRKGCVEKARRIFNGVR--G 230

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              ++V+W++++S   QNE   E+L  F++M+   +  +   + S L  C  +  ++ G+
Sbjct: 231 RERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGR 290

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA------------------ 765
            +H L +K G      +   LI +YS  G +  AR +F                      
Sbjct: 291 WVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRC 350

Query: 766 --------------NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
                          K + SW+ MI G+A +    EA+ LF E+   G +PD     + +
Sbjct: 351 GSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAI 410

Query: 812 AACKNSGLVEEG-W--KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
           +AC +   ++ G W   Y        N+I +    + ++D+  K G ++ A +    M  
Sbjct: 411 SACTHLATLDLGKWIHAYISRNKLQVNVILS----TTLIDMYMKCGCVENALEVFYAMEE 466

Query: 869 KPDATIWGALLGSCRIHGHLE 889
           K  +T W A++    ++G +E
Sbjct: 467 KGVST-WNAVILGLAMNGSVE 486



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 167/391 (42%), Gaps = 74/391 (18%)

Query: 256 RSYADWSSFLEDYESFGGEV-QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
           R    WS+ +  YE    E+ +E L ++ E+ G GV     ++   L  C++++   +G 
Sbjct: 233 RDMVSWSAMVSCYEQ--NEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGR 290

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR- 373
            VH   +K G +  V LK AL++ Y  C ++  A ++F +  +L D + WN +I   LR 
Sbjct: 291 WVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRC 350

Query: 374 ------------------------------NEKWENAIKLFREMQFSSAKAISRTIVKML 403
                                         +E +  A+ LF+EMQ    +     +V  +
Sbjct: 351 GSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAI 410

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            AC  +     GK IH Y+ ++ L+ N+ +   LI MY +   +E A  VF +M++  +S
Sbjct: 411 SACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVS 470

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +WN++I      G V+ + ++F  M  +   P+ IT+                + +L   
Sbjct: 471 TWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITF----------------MGVLGAC 514

Query: 524 QSLGFRPNGSSV--SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
           + +G   +G     S++ +   E  +  YG                     ++D+  +  
Sbjct: 515 RHMGLVNDGRHYFNSMIHEHKIEANIKHYG--------------------CMVDLLGRAG 554

Query: 582 CLQNAQEVFDNMK-NRNIVAWNSLISGYCFK 611
            L+ A+E+ D+M    ++  W +L+ G C K
Sbjct: 555 LLKEAEELIDSMPMAPDVATWGALL-GACRK 584



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 140/300 (46%), Gaps = 14/300 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY---ESFGGEVQELLEVWGELHGK 288
           S+I  YL  G    A   F+    +    WS+ +  Y   E F     E L ++ E+   
Sbjct: 342 SMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECF----SEALALFQEMQLH 397

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           GV      L   +  CT L    LG  +HA + +     +V L   L++ Y KC  VE+A
Sbjct: 398 GVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENA 457

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            ++F  + + +    WN +I+    N   E ++ +F +M+ +       T + +L AC  
Sbjct: 458 LEVFYAMEE-KGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRH 516

Query: 409 VGAFHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWN 466
           +G  ++G+   +  + +  +E+N+    C++ +  R   L+ A  + DSM    ++++W 
Sbjct: 517 MGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWG 576

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQS 525
           +++ +       ++   L  K+   ++QPD   ++ LLS  + + G++ NVL  +RG+ +
Sbjct: 577 ALLGACRKHRDNEMGERLGRKL--IQLQPDHDGFHVLLSNIYASKGNWGNVLE-IRGIMA 633


>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic-like [Glycine max]
          Length = 628

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/605 (34%), Positives = 326/605 (53%), Gaps = 40/605 (6%)

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            SY  LG++  + +LF++  +    P++  W  +++ H     + + L+    M +   +P
Sbjct: 64   SYASLGHLHHSVTLFHRTPN----PNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQP 119

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  ++S +L+A T    L   R  H + ++ GL   LYV T L+D Y +   + +AQ++F
Sbjct: 120  NAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLF 175

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
            D M  R++V++ ++++ Y   G+   A+ +   M  +    D+V WN ++ GY+  G   
Sbjct: 176  DAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMK----DVVCWNVMIDGYAQHGCPN 231

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            EALV                             +R+ +          ++PN  T+ ++L
Sbjct: 232  EALVF----------------------------FRKMMMMMGGNGNGKVRPNEITVVAVL 263

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
             +CG +G L+ GK +H     NG   +  V T L+DMY K G+L+ AR+VF     K + 
Sbjct: 264  SSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVV 323

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +WN MIMG+ I+G   EA+ LFHE+   G +P  ITF A+L AC ++GLV +GW+ FDSM
Sbjct: 324  AWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSM 383

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
               Y + P +EHY CMV+LLG+AG + EA+D +R+M  +PD  +WG LL +CRIH ++  
Sbjct: 384  KDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSL 443

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             E  +  L      +S  Y L+ N+ A +  W  V ++R  M   GV+     S I++  
Sbjct: 444  GEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKN 503

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             VH F A    HP + +IY  L  +   +K+  Y P T  V  DI E+EK + L  H+EK
Sbjct: 504  RVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEK 563

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA+ +GL+ T   A I+++KN RVC DCH   K MS + GR+I +RD  RFHHF  G CS
Sbjct: 564  LALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCS 623

Query: 1071 CNDCW 1075
            C D W
Sbjct: 624  CRDYW 628



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 216/449 (48%), Gaps = 23/449 (5%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           +++HA+L++RG      L   L   Y     +  +  LF    +  +  LW  II     
Sbjct: 40  LQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPN-PNVFLWTHIINAHAH 98

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
            + + +A+  + +M     +  + T+  +L+AC      H  + +H + +K  L S+L V
Sbjct: 99  FDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYV 154

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              L+  Y+R   +  A ++FD+M + +L S+ +M++ Y   G +  A  LF  M     
Sbjct: 155 STGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMG---- 210

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-------FRPNGSSVSVVLQAVTELR 546
             D++ WN ++ G+  HG     L   R M  +         RPN  +V  VL +  ++ 
Sbjct: 211 MKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVG 270

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L+ G+  H Y+  NG+  ++ VGT+L+DMY K   L++A++VFD M+ +++VAWNS+I 
Sbjct: 271 ALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIM 330

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIY 665
           GY   G    A ++ ++M    +KP  +++ ++++  +  G   +   +   MK+  G+ 
Sbjct: 331 GYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGME 390

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P V  +  +++   +    +E+      M+   ++P+     +LL  C     +  G+EI
Sbjct: 391 PKVEHYGCMVNLLGRAGRMQEAYDLVRSME---VEPDPVLWGTLLWACRIHSNVSLGEEI 447

Query: 726 HCLCLKNGFIKDA-YVATGLIDMYSKSGN 753
             + + NG      YV   L +MY+ + N
Sbjct: 448 AEILVSNGLASSGTYVL--LSNMYAAARN 474



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 128/286 (44%), Gaps = 48/286 (16%)

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           L   Y+  G    ++ + H   N    PNV  WT +I+     + +  +L ++ QM    
Sbjct: 61  LQRSYASLGHLHHSVTLFHRTPN----PNVFLWTHIINAHAHFDLFHHALSYYSQMLTHP 116

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           I+PN+ T+SSLL+ C     L   + +H   +K G     YV+TGL+D Y++ G++ SA+
Sbjct: 117 IQPNAFTLSSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQ 172

Query: 759 EVFRKSANKTLAS-------------------------------WNCMIMGFAIYGNGKE 787
           ++F     ++L S                               WN MI G+A +G   E
Sbjct: 173 KLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNE 232

Query: 788 AILLFHELLETG-------FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
           A++ F +++           +P+ IT  A+L++C   G +E G K+  S   +  I   +
Sbjct: 233 ALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG-KWVHSYVENNGIKVNV 291

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
              + +VD+  K G L++A      M  K D   W +++    IHG
Sbjct: 292 RVGTALVDMYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMGYGIHG 336



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 54/297 (18%)

Query: 207 LSSVKSKHAQMIKMG---KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           L   ++ H+  IK G    ++ S  +V +    Y   GD  SA K F     RS   +++
Sbjct: 133 LHPARAVHSHAIKFGLSSHLYVSTGLVDA----YARGGDVASAQKLFDAMPERSLVSYTA 188

Query: 264 FLEDYESFG--GEVQELLEVWG--------------ELHG---KGVIF------------ 292
            L  Y   G   E + L E  G                HG   + ++F            
Sbjct: 189 MLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNG 248

Query: 293 ----RSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
               R   +T++  L  C ++ A   G  VH+ +   G   +V +  AL++ Y KC  +E
Sbjct: 249 NGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLE 308

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            A K+F +V + +D + WN +IM    +   + A++LF EM     K    T V +L AC
Sbjct: 309 DARKVF-DVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTAC 367

Query: 407 AKVGAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           A  G   +G ++      GY     +E  +    C++++  R  +++ A  +  SM+
Sbjct: 368 AHAGLVSKGWEVFDSMKDGY----GMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSME 420



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 27/189 (14%)

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           +IH   L+ G      +   L   Y+  G+L  +  +F ++ N  +  W  +I   A + 
Sbjct: 41  QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFD 100

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACK----------------------NSGLVE 821
               A+  + ++L    QP+A T ++LL AC                       ++GLV+
Sbjct: 101 LFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARAVHSHAIKFGLSSHLYVSTGLVD 160

Query: 822 EGWKYFDSMSTD--YNIIP--TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
              +  D  S    ++ +P  ++  Y+ M+    K G L EA      M  K D   W  
Sbjct: 161 AYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMK-DVVCWNV 219

Query: 878 LLGSCRIHG 886
           ++     HG
Sbjct: 220 MIDGYAQHG 228


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/583 (36%), Positives = 323/583 (55%), Gaps = 40/583 (6%)

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P  +  S +L   T LR LK GR  H +I  +  + DL +   +++MY K   L+ AQ
Sbjct: 101  LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG----- 642
            ++FD M  +++V+W  LISGY   G    A  +  +M     +P+  + +SL+       
Sbjct: 161  DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 643  ------------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                                          Y+ W   +EA VI     NS    NVV+W 
Sbjct: 221  SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIF----NSLAAKNVVSWN 276

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            +LI+G  +       ++ F+QM ++  +P   T SS+   C   G L+ GK +H   +K+
Sbjct: 277  ALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKS 336

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G    AY+   LIDMY+KSG++K A++VFR+   + + SWN +I G+A +G G EA+ LF
Sbjct: 337  GGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLF 396

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             ++L+   QP+ ITF ++L AC +SGL++EG  YF+ M   + I   + H+  +VDLLG+
Sbjct: 397  EQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGR 455

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG L+EA  FI  MP KP A +WGALLGSCR+H +++    A+ ++F+L+P +S  + L+
Sbjct: 456  AGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLL 515

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + R  D  ++R  M E GVK     SW++I+  VHVF A    HP   EI    
Sbjct: 516  SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMW 575

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              +  ++K++GYVPDT  V   ++++++   L  H+EKLA+ + ++KT     IR+ KN 
Sbjct: 576  EKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 635

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH+A K+ S V GREI +RD  RFHHF  G CSC D W
Sbjct: 636  RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  156 bits (394), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 193/414 (46%), Gaps = 39/414 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  CT L     G  +HA +    F+ D+ L   ++N Y KC  +E A  LF ++   +
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT-K 169

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + W  +I    ++ +   A+ LF +M     +    T+  +L+A     + H G+Q+H
Sbjct: 170 DMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLH 229

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            + LK   + N+ V + L+ MY+R   +  A  +F+S+   N                  
Sbjct: 230 AFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN------------------ 271

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            +++WN L++GH   G  ++V+ L   M   GF P   + S V 
Sbjct: 272 -----------------VVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVF 314

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A      L+ G+  H +++++G     Y+G +L+DMY K+  +++A++VF  +  ++IV
Sbjct: 315 TACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIV 374

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +WNS+ISGY   GL   A ++  QM + +++P+ +++ S+++  S  G   E       M
Sbjct: 375 SWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM 434

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           K   I   V    +++    +     E+ KF  +M    IKP +    +LL +C
Sbjct: 435 KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM---PIKPTAAVWGALLGSC 485



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 193/429 (44%), Gaps = 67/429 (15%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           KML  C  +    +G+ IH ++  S  E +L + N +++MY++   LE A          
Sbjct: 110 KMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ--------- 160

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
                                  LF+KM +     D+++W  L+SG+   G     L L 
Sbjct: 161 ----------------------DLFDKMPTK----DMVSWTVLISGYSQSGQASEALALF 194

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M  LGF+PN  ++S +L+A        +GR+ H + L+ G D +++VG+SL+DMY + 
Sbjct: 195 PKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARW 254

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             ++ A+ +F+++  +N+V+WN+LI+G+  KG   +  ++  QM  +  +P   +++S+ 
Sbjct: 255 AHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVF 314

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYP-------------------------------NVV 669
           +  +  G  ++   +  H+  SG  P                               ++V
Sbjct: 315 TACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIV 374

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           +W S+ISG  Q+    E+L+ F QM +  ++PN  T  S+L  C   GLL  G+    L 
Sbjct: 375 SWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM 434

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEA 788
            K+           ++D+  ++G L  A +   +   K T A W  ++    ++ N    
Sbjct: 435 KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLG 494

Query: 789 ILLFHELLE 797
           +    ++ E
Sbjct: 495 VYAAEQIFE 503


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
            At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/616 (33%), Positives = 341/616 (55%), Gaps = 39/616 (6%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P+I  +N L++G   +  +   L L   ++  G   +G +  +VL+A T     K G + 
Sbjct: 74   PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H  +++ G ++D+   TSL+ +Y  +  L +A ++FD + +R++V W +L SGY   G  
Sbjct: 134  HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193

Query: 615  VNAKKMLNQMEEEEIKPD----------------------LVSW-------------NSL 639
              A  +  +M E  +KPD                      +V +              +L
Sbjct: 194  REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            V+ Y+  G+ ++A  +     +S +  ++VTW+++I G   N   +E ++ F+QM QE++
Sbjct: 254  VNLYAKCGKMEKARSVF----DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            KP+  ++   L +C  LG L  G+    L  ++ F+ + ++A  LIDMY+K G +    E
Sbjct: 310  KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF++   K +   N  I G A  G+ K +  +F +  + G  PD  TF  LL  C ++GL
Sbjct: 370  VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            +++G ++F+++S  Y +  T+EHY CMVDL G+AG LD+A+  I  MP +P+A +WGALL
Sbjct: 430  IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
              CR+    + AE   + L  LEP N+ NY  + N+ ++  RW++   +R  M++ G+K 
Sbjct: 490  SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 549

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
            +  +SWI+++  VH F A+   HP + +IY +L  L +EM+ +G+VP T  V+ D++EEE
Sbjct: 550  IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEE 609

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K +VL  H+EKLA+  GL+ T     IRV+KN RVC DCH   K +S +  REI +RD  
Sbjct: 610  KERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNN 669

Query: 1060 RFHHFREGECSCNDCW 1075
            RFH F  G CSCND W
Sbjct: 670  RFHCFTNGSCSCNDYW 685



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 165/367 (44%), Gaps = 36/367 (9%)

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
            E L+++  +   G+        ++LK CT+  +  LG+++H+ ++K GF+ DV    +L
Sbjct: 93  HETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSL 152

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
           ++ Y     +  A+KLF E+ D    + W  +      + +   AI LF++M     K  
Sbjct: 153 LSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           S  IV++L AC  VG    G+ I  Y+ +  ++ N  V   L+++Y++  K+E A  VFD
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
           SM + ++ +W++MI  Y    +      LF +M    ++PD  +                
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS---------------- 315

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
           ++  L    SLG                    L  G      I R+    +L++  +L+D
Sbjct: 316 IVGFLSSCASLG-------------------ALDLGEWGISLIDRHEFLTNLFMANALID 356

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           MY K   +    EVF  MK ++IV  N+ ISG    G    +  +  Q E+  I PD  +
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416

Query: 636 WNSLVSG 642
           +  L+ G
Sbjct: 417 FLGLLCG 423



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 114/523 (21%), Positives = 207/523 (39%), Gaps = 85/523 (16%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H SLI      D  L   L+      R  + +  LFS  +   +  L+N +I   + N
Sbjct: 31  QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSH-TQFPNIFLYNSLINGFVNN 89

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             +   + LF  ++         T   +L+AC +  +   G  +H  V+K     +++  
Sbjct: 90  HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+S+YS + +L  A ++FD + D ++ +W ++ S YT  G    A  LF K       
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK------- 202

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
                                       M  +G +P+   +  VL A   +  L  G   
Sbjct: 203 ----------------------------MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
             Y+    +  + +V T+L+++Y K   ++ A+ VFD+M  ++IV W+++I GY      
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294

Query: 615 VNAKKMLNQMEEEEIKP------------------DLVSW-----------------NSL 639
               ++  QM +E +KP                  DL  W                 N+L
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           +  Y+  G       +   MK      ++V   + ISG  +N + + S   F Q ++  I
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410

Query: 700 KPNSTTMSSLLQTCGGLGLLQNG----KEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNL 754
            P+ +T   LL  C   GL+Q+G      I C+      +K      G ++D++ ++G L
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYA----LKRTVEHYGCMVDLWGRAGML 466

Query: 755 KSA-REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
             A R +           W  ++ G  +  + + A  +  EL+
Sbjct: 467 DDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509


>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
 gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
 gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 643

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/586 (36%), Positives = 335/586 (57%), Gaps = 13/586 (2%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGR 552
            +PD   +N L+ G+       N + +   M   GF  P+  S + V++AV   R L+ G 
Sbjct: 67   EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H   L++GL+  L+VGT+L+ MY    C++ A++VFD M   N+VAWN++I+  CF+G
Sbjct: 127  QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA-CFRG 185

Query: 613  LFV-NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
              V  A+++ ++M    +  +  SWN +++GY   G+ + A  I   M     + + V+W
Sbjct: 186  NDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMP----HRDDVSW 237

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            +++I G   N ++ ES  +F ++Q+  + PN  +++ +L  C   G  + GK +H    K
Sbjct: 238  STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAIL 790
             G+     V   LIDMYS+ GN+  AR VF     K  + SW  MI G A++G G+EA+ 
Sbjct: 298  AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF+E+   G  PD I+F +LL AC ++GL+EEG  YF  M   Y+I P IEHY CMVDL 
Sbjct: 358  LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 417

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G++G L +A+DFI  MP  P A +W  LLG+C  HG++E AE   +RL +L+P NS +  
Sbjct: 418  GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 477

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N  A + +W+DV  +R SM    +K    WS +++ + ++ F+A         E + 
Sbjct: 478  LLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHE 537

Query: 971  ELYHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
            +L  ++  +K + GY P+      D++EEEK   +  H+EKLA+ + L +    A IR++
Sbjct: 538  KLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIV 597

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN R+C DCH   K  S V G EI +RD  RFH F++G CSC D W
Sbjct: 598  KNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 202/464 (43%), Gaps = 51/464 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVH------LKCALMNFYGKCRDVESANKLFS 353
           +L  C  L A     ++H   IK G D D +      L CA+        D     +   
Sbjct: 11  LLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAI-----SISDALPYARRLL 62

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ---FSSAKAISRTIVKMLQACAKVG 410
                 D  ++N ++     +++  N++ +F EM    F    + S   V  ++A     
Sbjct: 63  LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFV--IKAVENFR 120

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           +   G Q+H   LK  LES+L V   LI MY     +E A +VFD M   NL +WN++I+
Sbjct: 121 SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT 180

Query: 471 SYTGLGYVDVAWSLFNKM----------------------NSSRI-----QPDIITWNCL 503
           +      V  A  +F+KM                      ++ RI       D ++W+ +
Sbjct: 181 ACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTM 240

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           + G   +GS+       R +Q  G  PN  S++ VL A ++    ++G+  HG++ + G 
Sbjct: 241 IVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY 300

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            + + V  +L+DMY +   +  A+ VF+ M+  R IV+W S+I+G    G    A ++ N
Sbjct: 301 SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFN 360

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQN 681
           +M    + PD +S+ SL+   S  G  +E       MK    I P +  +  ++    ++
Sbjct: 361 EMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRS 420

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
              +++  F  QM    I P +    +LL  C   G ++  +++
Sbjct: 421 GKLQKAYDFICQMP---IPPTAIVWRTLLGACSSHGNIELAEQV 461



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 130/290 (44%), Gaps = 6/290 (2%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y++ G+  SA + F     R    WS+ +    +  G   E    + EL   G+      
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGI-AHNGSFNESFLYFRELQRAGMSPNEVS 271

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +L  C++  +F  G  +H  + K G+ + V +  AL++ Y +C +V  A  +F  + 
Sbjct: 272 LTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 331

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +    + W  +I     + + E A++LF EM          + + +L AC+  G   EG+
Sbjct: 332 EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391

Query: 417 QIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS-SWNSMISSYTG 474
                + +   +E  +    C++ +Y R+ KL+ A      M     +  W +++ + + 
Sbjct: 392 DYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSS 451

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGM 523
            G +++A  +  ++N   + P+      LLS  + T G +++V ++ + M
Sbjct: 452 HGNIELAEQVKQRLN--ELDPNNSGDLVLLSNAYATAGKWKDVASIRKSM 499


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 720

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/649 (34%), Positives = 355/649 (54%), Gaps = 48/649 (7%)

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
            S + ++ +    G +  A  LF+ M     +  I+TWN +++ +  H   +  + + R M
Sbjct: 83   SGSKLVDASLKCGEIGYARQLFDGMP----ERHIVTWNSIIAYYIKHRRSKEAVEMYRLM 138

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDC 582
             S    P+  ++S V +A ++L L K  + SHG  +  GL+  +++VG++L+DMYVK   
Sbjct: 139  ISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 198

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------- 632
             + A+ V D ++ +++V   +LI GY  KG    A K    M  E+++P+          
Sbjct: 199  TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 258

Query: 633  -------------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                     L S  SL++ Y       ++L++   +K    YPN
Sbjct: 259  CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIK----YPN 314

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
             VTWTSLISG +QN     +L  F +M ++ +KPNS T+SS L+ C  L + + G+++H 
Sbjct: 315  QVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHG 374

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            +  K GF +D Y  +GLI++Y K G    AR VF   +   + S N MI  +A  G G+E
Sbjct: 375  IVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGRE 434

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF  ++  G QP+ +T  ++L AC NSGLVEEG + FDS   D  I+ T +HY+CMV
Sbjct: 435  ALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKD-KIMLTNDHYACMV 493

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            D+LG+AG L+EA + + T    PD  +W  LL +C++H  +E AE  +R++ ++ P +  
Sbjct: 494  DMLGRAGRLEEA-EMLITEVTNPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEG 552

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA-EGAPHPATG 966
               L+ NL A + +W+ V  ++  M E+ +K     SW++ID+  H F A +   HP + 
Sbjct: 553  TLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSE 612

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
            +I   L  L+ + K LGYV D  CV+QD++E  K + L  H+EKLAI + + +      I
Sbjct: 613  QILENLEELIKKAKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVG-GSI 671

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R++KN RVC DCH+  K +S +  REI  RD  RFHHFR+G CSC D W
Sbjct: 672  RILKNLRVCVDCHSWIKIVSRIIKREIICRDSKRFHHFRDGSCSCGDYW 720



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 136/636 (21%), Positives = 241/636 (37%), Gaps = 132/636 (20%)

Query: 178 PTDTLAKQAQLSCISSGFCFLNETNKF----------RCLSSVKSKHAQMIKMGKIWNSD 227
           P  ++  Q +L CI+     L  T+ F          R +S +K+  AQM+K G  +  +
Sbjct: 26  PELSINSQFRLLCITCDS--LTTTHTFSQLLRQCIDERSISGIKNIQAQMLKSG--FPVE 81

Query: 228 DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
                L+   L+ G+   A + F     R    W+S +  Y       +E +E++  +  
Sbjct: 82  LSGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHR-RSKEAVEMYRLMIS 140

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVE 346
             V+     L+ + K  + L         H   +  G +  +V +  AL++ Y K     
Sbjct: 141 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 200

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            A  +   V + +  L+   I+    + E  E A+K F+ M     +    T   +L +C
Sbjct: 201 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTE-AVKAFQSMLVEKVQPNEYTYASVLISC 259

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +     GK IHG ++KS  ES L+    L++MY R + ++ +  VF  +K  N  +W 
Sbjct: 260 GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWT 319

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           S+IS     G  + A   F KM    ++                                
Sbjct: 320 SLISGLVQNGREETALIEFRKMMRDSVK-------------------------------- 347

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
              PN  ++S  L+  + L + + GR+ HG + + G D D Y G+ L+++Y K  C   A
Sbjct: 348 ---PNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMA 404

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           + VFD +   ++++ N++I  Y   G                                  
Sbjct: 405 RLVFDTLSEVDVISLNTMIYSYAQNGF--------------------------------- 431

Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
              +EAL +   M N G+ PN V                                   T+
Sbjct: 432 --GREALELFERMINLGLQPNDV-----------------------------------TV 454

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-----LIDMYSKSGNLKSAREVF 761
            S+L  C   GL++ G E+      + F KD  + T      ++DM  ++G L+ A  + 
Sbjct: 455 LSVLLACNNSGLVEEGCELF-----DSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLI 509

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            +  N  L  W  ++    ++   + A  +  ++LE
Sbjct: 510 TEVTNPDLVLWRTLLSACKVHRKVEMAERITRKILE 545



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 5/272 (1%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +      G E   L+E + ++    V   S  L+  L+ C+ L  F  G +VH  +
Sbjct: 318 WTSLISGLVQNGREETALIE-FRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIV 376

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            K GFD D +    L+  YGKC   + A  +F  +S++ D +  N +I    +N     A
Sbjct: 377 SKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEV-DVISLNTMIYSYAQNGFGREA 435

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           ++LF  M     +    T++ +L AC   G   EG ++     K  +        C++ M
Sbjct: 436 LELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDM 495

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP-DIIT 499
             R  +LE A  +   + + +L  W +++S+      V++A  +  K+    I P D  T
Sbjct: 496 LGRAGRLEEAEMLITEVTNPDLVLWRTLLSACKVHRKVEMAERITRKI--LEIAPGDEGT 553

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
              L + + + G ++ V+ +   M+ +  + N
Sbjct: 554 LILLSNLYASTGKWKRVIEMKSKMKEMKLKKN 585


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/646 (35%), Positives = 360/646 (55%), Gaps = 42/646 (6%)

Query: 464  SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
            S + ++ +    G +D A  +F+ M+    +  I+TWN L++    H   +  + + R M
Sbjct: 101  SGSKLVDASLKCGDIDYARQVFDGMS----ERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDC 582
             +    P+  ++S V +A ++L L K  + SHG  +  GL+  +++VG++L+DMYVK   
Sbjct: 157  ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV-- 640
             + A+ V D ++ +++V   +LI GY  KG    A K    M  E+++P+  ++ S++  
Sbjct: 217  TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276

Query: 641  -------------------SGYSIWGQSKEALVIIHHMKNSGI-----------YPNVVT 670
                               SG+     S+ +L+ ++ ++ S +           YPN V+
Sbjct: 277  CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMY-LRCSLVDDSLRVFKCIEYPNQVS 335

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            WTSLISG +QN     +L  F +M ++ IKPNS T+SS L+ C  L + + G++IH +  
Sbjct: 336  WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K GF +D Y  +GLID+Y K G    AR VF   +   + S N MI  +A  G G+EA+ 
Sbjct: 396  KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF  ++  G QP+ +T  ++L AC NS LVEEG + FDS   D  I+ T +HY+CMVDLL
Sbjct: 456  LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLL 514

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG L+EA + + T    PD  +W  LL +C++H  +E AE  +R++ ++EP +     
Sbjct: 515  GRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLI 573

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA-EGAPHPATGEIY 969
            LM NL A + +W  V  ++  M ++ +K     SW++I++  H F A +   HP + +I 
Sbjct: 574  LMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQIL 633

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
              L  L+ + K LGYV D  CV+QD++E  K + L  H+EKLAI + + +      IR++
Sbjct: 634  ENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVG-GSIRIL 692

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVC DCH+  K +S V  REI  RD  RFHHFR+G CSC D W
Sbjct: 693  KNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 124/557 (22%), Positives = 219/557 (39%), Gaps = 87/557 (15%)

Query: 178 PTDTLAKQAQLSCISSGFCFLNETNKF----------RCLSSVKSKHAQMIKMGKIWNSD 227
           P  ++  Q +L CI+     L  T+ F          R +S +K+  A M+K G  + ++
Sbjct: 44  PESSINNQFRLLCITCDT--LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSG--FPAE 99

Query: 228 DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
                L+   L+ GD   A + F     R    W+S +  Y       +E +E++  +  
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIA-YLIKHRRSKEAVEMYRLMIT 158

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVE 346
             V+     L+ + K  + L         H   +  G +  +V +  AL++ Y K     
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            A  +   V + +  L+   I+    + E  E A+K F+ M     +    T   +L +C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTE-AVKAFQSMLVEKVQPNEYTYASVLISC 277

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +     GK IHG ++KS  ES L+    L++MY R + ++ + RVF  ++  N  SW 
Sbjct: 278 GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWT 337

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           S+IS     G  ++A   F KM    I+                                
Sbjct: 338 SLISGLVQNGREEMALIEFRKMMRDSIK-------------------------------- 365

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
              PN  ++S  L+  + L + + GR+ HG + + G D D Y G+ L+D+Y K  C   A
Sbjct: 366 ---PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           + VFD +   ++++ N++I  Y   G                                  
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGF--------------------------------- 449

Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
              +EAL +   M N G+ PN VT  S++     +    E  + F   +++ I   +   
Sbjct: 450 --GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY 507

Query: 707 SSLLQTCGGLGLLQNGK 723
           + ++   G  G L+  +
Sbjct: 508 ACMVDLLGRAGRLEEAE 524



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 5/301 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  YL       + + F      +   W+S +      G E   L+E + ++    + 
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE-FRKMMRDSIK 365

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S  L+  L+ C+ L  F  G ++H  + K GFD D +    L++ YGKC   + A  +
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +S++ D +  N +I    +N     A+ LF  M     +    T++ +L AC     
Sbjct: 426 FDTLSEV-DVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
             EG ++     K  +        C++ +  R  +LE A  +   + + +L  W +++S+
Sbjct: 485 VEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGFRP 530
                 V++A  +  K+    I+P       L+S  + + G +  V+ +   M+ +  + 
Sbjct: 545 CKVHRKVEMAERITRKI--LEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602

Query: 531 N 531
           N
Sbjct: 603 N 603


>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
 gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
          Length = 635

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/586 (36%), Positives = 335/586 (57%), Gaps = 13/586 (2%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGR 552
            +PD   +N L+ G+       N + +   M   GF  P+  S + V++AV   R L+ G 
Sbjct: 59   EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 118

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H   L++GL+  L+VGT+L+ MY    C++ A++VFD M   N+VAWN++I+  CF+G
Sbjct: 119  QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA-CFRG 177

Query: 613  LFV-NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
              V  A+++ ++M    +  +  SWN +++GY   G+ + A  I   M     + + V+W
Sbjct: 178  NDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMP----HRDDVSW 229

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            +++I G   N ++ ES  +F ++Q+  + PN  +++ +L  C   G  + GK +H    K
Sbjct: 230  STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 289

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAIL 790
             G+     V   LIDMYS+ GN+  AR VF     K  + SW  MI G A++G G+EA+ 
Sbjct: 290  AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 349

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF+E+   G  PD I+F +LL AC ++GL+EEG  YF  M   Y+I P IEHY CMVDL 
Sbjct: 350  LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 409

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G++G L +A+DFI  MP  P A +W  LLG+C  HG++E AE   +RL +L+P NS +  
Sbjct: 410  GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 469

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N  A + +W+DV  +R SM    +K    WS +++ + ++ F+A         E + 
Sbjct: 470  LLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHE 529

Query: 971  ELYHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
            +L  ++  +K + GY P+      D++EEEK   +  H+EKLA+ + L +    A IR++
Sbjct: 530  KLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIV 589

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN R+C DCH   K  S V G EI +RD  RFH F++G CSC D W
Sbjct: 590  KNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 202/464 (43%), Gaps = 51/464 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVH------LKCALMNFYGKCRDVESANKLFS 353
           +L  C  L A     ++H   IK G D D +      L CA+        D     +   
Sbjct: 3   LLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAI-----SISDALPYARRLL 54

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ---FSSAKAISRTIVKMLQACAKVG 410
                 D  ++N ++     +++  N++ +F EM    F    + S   V  ++A     
Sbjct: 55  LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFV--IKAVENFR 112

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           +   G Q+H   LK  LES+L V   LI MY     +E A +VFD M   NL +WN++I+
Sbjct: 113 SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT 172

Query: 471 SYTGLGYVDVAWSLFNKM----------------------NSSRI-----QPDIITWNCL 503
           +      V  A  +F+KM                      ++ RI       D ++W+ +
Sbjct: 173 ACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTM 232

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           + G   +GS+       R +Q  G  PN  S++ VL A ++    ++G+  HG++ + G 
Sbjct: 233 IVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY 292

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            + + V  +L+DMY +   +  A+ VF+ M+  R IV+W S+I+G    G    A ++ N
Sbjct: 293 SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFN 352

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQN 681
           +M    + PD +S+ SL+   S  G  +E       MK    I P +  +  ++    ++
Sbjct: 353 EMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRS 412

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
              +++  F  QM    I P +    +LL  C   G ++  +++
Sbjct: 413 GKLQKAYDFICQMP---IPPTAIVWRTLLGACSSHGNIELAEQV 453



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 130/290 (44%), Gaps = 6/290 (2%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y++ G+  SA + F     R    WS+ +    +  G   E    + EL   G+      
Sbjct: 205 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGI-AHNGSFNESFLYFRELQRAGMSPNEVS 263

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +L  C++  +F  G  +H  + K G+ + V +  AL++ Y +C +V  A  +F  + 
Sbjct: 264 LTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 323

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +    + W  +I     + + E A++LF EM          + + +L AC+  G   EG+
Sbjct: 324 EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 383

Query: 417 QIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS-SWNSMISSYTG 474
                + +   +E  +    C++ +Y R+ KL+ A      M     +  W +++ + + 
Sbjct: 384 DYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSS 443

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGM 523
            G +++A  +  ++N   + P+      LLS  + T G +++V ++ + M
Sbjct: 444 HGNIELAEQVKQRLN--ELDPNNSGDLVLLSNAYATAGKWKDVASIRKSM 491


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like
            [Glycine max]
          Length = 722

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 237/719 (32%), Positives = 375/719 (52%), Gaps = 46/719 (6%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            +T   +L+AC        GK +H    KS +  +  + N    +YS+   L  A   F  
Sbjct: 10   QTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHL 69

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
             +  N+ S+N++I++Y     + +A  +F+++     QPDI+++N L++ +   G     
Sbjct: 70   TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIP----QPDIVSYNTLIAAYADRGECGPT 125

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
            L L   ++ L    +G ++S V+ A  +   L   R+ H +++  G D    V  +++  
Sbjct: 126  LRLFEEVRELRLGLDGFTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLAC 183

Query: 577  YVKNDCLQNAQEVFDNMK---NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
            Y +   L  A+ VF  M     R+ V+WN++I         + A  +  +M    +K D+
Sbjct: 184  YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDM 243

Query: 634  VSWNSLVSGYS-----IWGQSKEALVI---IHHMKNSG---------------------- 663
             +  S+++ ++     + G+    ++I    H   + G                      
Sbjct: 244  FTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFE 303

Query: 664  --IYPNVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                P++V W ++ISG SL  +   + L  F +MQ+   +P+  +   +   C  L    
Sbjct: 304  EITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPS 363

Query: 721  NGKEIHCLCLKNGFIKD-AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             GK++H L +K+    +   V   L+ MYSK GN+  AR VF         S N MI G+
Sbjct: 364  LGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGY 423

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A +G   E++ LF  +LE    P++ITF A+L+AC ++G VEEG KYF+ M   + I P 
Sbjct: 424  AQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPE 483

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
             EHYSCM+DLLG+AG L EA   I TMPF P +  W  LLG+CR HG++E A  A+    
Sbjct: 484  AEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFL 543

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +LEP N+A Y ++ N+ A + RWE+   ++  M E GVK     SWI+ID+ VHVF AE 
Sbjct: 544  RLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAED 603

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVY---QDIDEEEKGKVLLSHTEKLAIVYG 1016
              HP   EI+  +  ++ +MK+ GYVPD R      ++++ +E+ + LL H+EKLA+ +G
Sbjct: 604  TSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFG 663

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+ T+   PI V+KN R+C DCH A K +S + GREI +RD  RFH F+EG CSC D W
Sbjct: 664  LISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 42/404 (10%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL--EDDLLWNEIIMVKL 372
           ++H  ++  G D    +  A++  Y +   +  A ++F E+ +    D++ WN +I+   
Sbjct: 160 QLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACG 219

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           ++ +   A+ LFREM     K    T+  +L A   V     G+Q HG ++KS    N  
Sbjct: 220 QHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSH 279

Query: 433 VCNCLISMYSR-NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           V + LI +YS+    +    +VF+ +   +L  WN+MIS +          SL+  ++  
Sbjct: 280 VGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGF----------SLYEDLS-- 327

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                                 ++ L   R MQ  GFRP+  S   V  A + L     G
Sbjct: 328 ----------------------EDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLG 365

Query: 552 RESHGYILRNGLDYD-LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           ++ H   +++ + Y+ + V  +L+ MY K   + +A+ VFD M   N V+ NS+I+GY  
Sbjct: 366 KQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQ 425

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVV 669
            G+ V + ++   M E++I P+ +++ +++S     G+ +E     + MK    I P   
Sbjct: 426 HGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAE 485

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            ++ +I    +    +E+ +    M      P S   ++LL  C
Sbjct: 486 HYSCMIDLLGRAGKLKEAERIIETMP---FNPGSIEWATLLGAC 526



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 273 GEVQELLEVWG---ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           G+ +E +E  G   E+  +G+      +  +L   T +     G + H  +IK GF  + 
Sbjct: 219 GQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNS 278

Query: 330 HLKCALMNFYGKCR-DVESANKLFSEVSDLEDDLLWNEIIM-VKLRNEKWENAIKLFREM 387
           H+   L++ Y KC   +    K+F E++   D +LWN +I    L  +  E+ +  FREM
Sbjct: 279 HVGSGLIDLYSKCAGSMVECRKVFEEIT-APDLVLWNTMISGFSLYEDLSEDGLWCFREM 337

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN-LSVCNCLISMYSRNNK 446
           Q +  +    + V +  AC+ + +   GKQ+H   +KS +  N +SV N L++MYS+   
Sbjct: 338 QRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGN 397

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +  A RVFD+M +HN  S NSMI+ Y   G    +  LF  M    I P+ IT+  +LS 
Sbjct: 398 VHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSA 457


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 244/854 (28%), Positives = 411/854 (48%), Gaps = 87/854 (10%)

Query: 257  SYADWSSFLEDYESFGGEVQEL--LEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            +Y+D S+ L    S G   Q L  LE   E   +G          + +LC    A   G+
Sbjct: 63   TYSDRSAALRALCSHGQLAQALWLLESSPEPPDEGA------YVALFRLCEWRRAVDAGM 116

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
               A        F + L  A+++   +  ++  A ++F+++ +  D   WN ++    + 
Sbjct: 117  RACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPE-RDVFSWNVMVGGYGKV 175

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
               E A+ L+  M ++  +    T   +L+ C  +  +  G+++H +VL+      + V 
Sbjct: 176  GFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVL 235

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N L++MY++   +  A +V                               F+ M  +   
Sbjct: 236  NALVTMYAKCGDIVAARKV-------------------------------FDGMAVT--- 261

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D I+WN +++GHF +   +  L L   M     +PN  +++ V  A   L  + + +E 
Sbjct: 262  -DCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEM 320

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            HG+ ++ G   D+    SL+ MY     + +A ++F  M+ ++ ++W ++ISGY   G  
Sbjct: 321  HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380

Query: 615  VNAKKMLNQMEEEEIKPD-----------------------------------LVSWNSL 639
              A ++   ME   + PD                                   +V  N+L
Sbjct: 381  DKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANAL 440

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            +  Y+      +A+ +   M       +VV+W+S+I+G   N    E+L +F  M    +
Sbjct: 441  LEMYAKSKHIDKAIEVFKFMAEK----DVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-V 495

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            KPNS T  + L  C   G L++GKEIH   L+ G   + YV   L+D+Y K G    A  
Sbjct: 496  KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
             F   + K + SWN M+ GF  +G G  A+ LF++++E G  PD +TF ALL AC  +G+
Sbjct: 556  QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGM 615

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            V +GW+ F  M+  ++I+P ++HY+CMVDLL + G L EA++ I  MP KPDA +WGALL
Sbjct: 616  VIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 675

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
              CRIH H+E  E+A++ + +LEP + A + L+ +L   + +W  V R+R +M E G++ 
Sbjct: 676  NGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQ 735

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
                SW+++  + H F  +   HP   EI   L+ +   MK  G+ P      +++ E++
Sbjct: 736  DNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVSEDD 795

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
               +L  H+E+LA+ +GL+ T     I V KN   C  CH   K +S +  REI +RD  
Sbjct: 796  ---ILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTK 852

Query: 1060 RFHHFREGECSCND 1073
            + H F++G+CSC D
Sbjct: 853  QLHCFKDGDCSCGD 866



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 215/509 (42%), Gaps = 53/509 (10%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL----E 266
           +  HA +++ G   +  D++ +L+  Y + GD  +A K F          W++ +    E
Sbjct: 217 REVHAHVLRFG-FGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFE 275

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
           ++E   G     LE++  +    V      +T +      L       E+H   +KRGF 
Sbjct: 276 NHECEAG-----LELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFA 330

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            DV    +L+  Y     +  A K+FS + + +D + W  +I    +N   + A++++  
Sbjct: 331 IDVAFCNSLIQMYTSLGRMGDAGKIFSRM-ETKDAMSWTAMISGYEKNGFPDKALEVYAL 389

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+  +      TI   L ACA +G    G ++H           + V N L+ MY+++  
Sbjct: 390 MELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 449

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ A  VF  M + ++ SW+SMI+ +                                  
Sbjct: 450 IDKAIEVFKFMAEKDVVSWSSMIAGFC--------------------------------- 476

Query: 507 HFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            F H S++  L   R M  LG  +PN  +    L A      L+ G+E H Y+LR G+  
Sbjct: 477 -FNHRSFE-ALYYFRYM--LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGS 532

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           + YV  +L+D+YVK      A   F     +++V+WN ++SG+   GL   A  + NQM 
Sbjct: 533 EGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMV 592

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENY 684
           E    PD V++ +L+   S  G   +   + H M     I PN+  +  ++    +    
Sbjct: 593 EMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKL 652

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            E+     +M    IKP++    +LL  C
Sbjct: 653 TEAYNLINRMP---IKPDAAVWGALLNGC 678


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 785

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/751 (32%), Positives = 383/751 (50%), Gaps = 78/751 (10%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+LC +L +   G  VH+ +   G   D  L   L+  Y  C D+    ++F  +  L 
Sbjct: 63   VLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI--LN 120

Query: 360  DDL-LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            D + LWN ++    +   +  ++ LF +MQ    +  S T   +L+  A      E K++
Sbjct: 121  DKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRV 180

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            HGYVLK    S  +V N LI+ Y +  ++E A  +FD + D ++ SWNSMIS  T     
Sbjct: 181  HGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCT----- 235

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                     MN                     G  +N L     M +LG   + +++  V
Sbjct: 236  ---------MN---------------------GFSRNGLEFFIQMLNLGVDVDSATLVNV 265

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
            L A   +  L  GR  H Y ++ G    +    +L+DMY K   L  A EVF  M    I
Sbjct: 266  LVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTI 325

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW---------------------- 636
            V+W S+I+ +  +GL   A  + ++M+ + ++PD+ +                       
Sbjct: 326  VSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNH 385

Query: 637  -------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                         N+L++ Y+  G  +EA +I   +       N+V+W ++I G  QN  
Sbjct: 386  IKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLP----VKNIVSWNTMIGGYSQNSL 441

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              E+L+ F+ MQ++ +KP+  TM+ +L  C GL  L+ G+EIH   L+ G+  D +VA  
Sbjct: 442  PNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACA 500

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            L+DMY K G L  A+++F     K +  W  MI G+ ++G GKEAI  F ++   G +P+
Sbjct: 501  LVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPE 560

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
              +FT++L AC +SGL++EGWK FDSM ++ NI P +EHY+CMVDLL ++G L  A+ FI
Sbjct: 561  ESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFI 620

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
             TMP KPDA IWGALL  CRIH  +E AE  +  +F+LEP N+  Y L+ N+ A + +WE
Sbjct: 621  ETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWE 680

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            +V++++  + + G+K+    SWI++    ++F A    HP    I   L  L  +M + G
Sbjct: 681  EVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGG 740

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            Y    +    + D+  K  +L +H+EKLA++
Sbjct: 741  YSNKIKYALINADDRLKEVLLCAHSEKLAML 771



 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 239/527 (45%), Gaps = 49/527 (9%)

Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAA 247
            +C+  GF     + K R     K  H  ++K+G   + + +V SLI  Y + G+  SA 
Sbjct: 161 FTCVLKGFA---ASAKVR---ECKRVHGYVLKLG-FGSYNAVVNSLIAAYFKCGEVESAR 213

Query: 248 KAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL 307
             F     R    W+S +    +  G  +  LE + ++   GV   S  L  +L  C  +
Sbjct: 214 ILFDELSDRDVVSWNSMISGC-TMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANV 272

Query: 308 MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
               LG  +HA  +K GF   V     L++ Y KC ++  AN++F ++ +    + W  I
Sbjct: 273 GNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGE-TTIVSWTSI 331

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I   +R      AI LF EMQ    +     +  ++ ACA   +  +G+++H ++ K+ +
Sbjct: 332 IAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNM 391

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            SNL V N L++MY++   +E A  +F  +   N+ SWN+MI  Y+     + A  LF  
Sbjct: 392 GSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLD 451

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M   +++PD +T  C                                   VL A   L  
Sbjct: 452 MQ-KQLKPDDVTMAC-----------------------------------VLPACAGLAA 475

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L+ GRE HG+ILR G   DL+V  +L+DMYVK   L  AQ++FD +  ++++ W  +I+G
Sbjct: 476 LEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAG 535

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYP 666
           Y   G    A     +M    I+P+  S+ S++   +  G  KE   +   MK+   I P
Sbjct: 536 YGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEP 595

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +  +  ++   +++ N   + KF   M    IKP++    +LL  C
Sbjct: 596 KLEHYACMVDLLIRSGNLSRAYKFIETMP---IKPDAAIWGALLSGC 639



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
           + R ++K   + Q+ +++ N  T  S+LQ C  L  L++GK +H +   NG   D  +  
Sbjct: 39  DLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGA 96

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+ MY   G+L   R +F    N  +  WN ++  +A  GN +E++ LF ++ E G + 
Sbjct: 97  KLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRG 156

Query: 803 DAITFTALLAACKNSGLVEE 822
           D+ TFT +L     S  V E
Sbjct: 157 DSYTFTCVLKGFAASAKVRE 176


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 627

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 215/575 (37%), Positives = 319/575 (55%), Gaps = 41/575 (7%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            +L A  + R L+ G+  H ++++       Y+ T L+  Y K DCL++A++V D M  +N
Sbjct: 57   LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 116

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------------------------- 632
            +V+W ++IS Y   G    A  +  +M   + KP+                         
Sbjct: 117  VVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHG 176

Query: 633  -LVSWN---------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
             +V WN         SL+  Y+  GQ +EA  I   +       +VV+ T++I+G  Q  
Sbjct: 177  LIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPER----DVVSCTAIIAGYAQLG 232

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               E+L+ F ++Q E ++PN  T +SLL    GL LL +GK+ HC  L+      A +  
Sbjct: 233  LDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 292

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQ 801
             LIDMYSK GNL  A+ +F     +T  SWN M++G++ +G G+E + LF  +  E   +
Sbjct: 293  SLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 352

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSM-STDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            PDA+T  A+L+ C +  + + G   +D M + +Y I P  EHY C+VD+LG+AG +DEA+
Sbjct: 353  PDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAF 412

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            +FI+ MP KP A + G+LLG+CR+H  ++  E    RL ++EP N+ NY ++ NL A + 
Sbjct: 413  EFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAG 472

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RWEDV  +R  M +  V      SWIQ +Q +H F A    HP   E+  ++  +  +MK
Sbjct: 473  RWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMK 532

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            + GYVPD  CV  D+DEE+K K+LL H+EKLA+ +GL+ T    PIRV KN R+C DCH 
Sbjct: 533  QAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHN 592

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             AK  S V  RE+ LRD  RFH   +G CSC D W
Sbjct: 593  FAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 197/417 (47%), Gaps = 42/417 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  C    A   G  VHA +IK  +    +L+  L+ FYGKC  +E A K+  E+ + +
Sbjct: 57  LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE-K 115

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +I    +      A+ +F EM  S  K    T   +L +C +      GKQIH
Sbjct: 116 NVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIH 175

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G ++K   +S++ V + L+ MY++  ++E A  +F+ + + ++ S  ++I+ Y  LG  +
Sbjct: 176 GLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDE 235

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  +F ++ S  ++P+ +T+  LL+                                  
Sbjct: 236 EALEMFQRLQSEGMRPNYVTYASLLT---------------------------------- 261

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A++ L LL +G+++H ++LR  L +   +  SL+DMY K   L  AQ +FDNM  R  +
Sbjct: 262 -ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAI 320

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           +WN+++ GY   GL     ++   M +E+ +KPD V+  +++SG S        L I   
Sbjct: 321 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDG 380

Query: 659 M--KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           M     GI P+   +  ++    +     E+ +F  +M     KP +  + SLL  C
Sbjct: 381 MVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLGAC 434



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 180/403 (44%), Gaps = 69/403 (17%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L AC    A  EG+++H +++K+       +   L+  Y + + LE A +V D M + N
Sbjct: 57  LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 116

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                              +++W  ++S +   G     L++  
Sbjct: 117 -----------------------------------VVSWTAMISRYSQTGHSSEALSVFA 141

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M     +PN  + + VL +      L  G++ HG I++   D  ++VG+SL+DMY K  
Sbjct: 142 EMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 201

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL-- 639
            ++ A+E+F+ +  R++V+  ++I+GY   GL   A +M  +++ E ++P+ V++ SL  
Sbjct: 202 QIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLT 261

Query: 640 -VSGYSIWGQSKEA--------LVIIHHMKNSGI---------------YPNV-----VT 670
            +SG ++    K+A        L     ++NS I               + N+     ++
Sbjct: 262 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAIS 321

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIH--C 727
           W +++ G  ++   RE L+ F  M+ E  +KP++ T+ ++L  C    +   G  I+   
Sbjct: 322 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGM 381

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
           +  + G   D      ++DM  ++G +  A E  ++  +K  A
Sbjct: 382 VAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 424



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 3/161 (1%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           +LL  C     L+ G+ +H   +K  ++   Y+ T L+  Y K   L+ AR+V  +   K
Sbjct: 56  ALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 115

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC-KNSGLVEEGWKY 826
            + SW  MI  ++  G+  EA+ +F E++ +  +P+  TF  +L +C + SGL     K 
Sbjct: 116 NVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLAL--GKQ 173

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
              +   +N    I   S ++D+  KAG ++EA +    +P
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700-like
            [Brachypodium distachyon]
          Length = 796

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/614 (35%), Positives = 330/614 (53%), Gaps = 35/614 (5%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
             PD + WN LL+G    GS + +   +R   +   RP+ ++++ VL A  E+     GR 
Sbjct: 186  SPDTVLWNTLLAG--LSGS-EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRC 242

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             H +  + GL    +V T L+ +Y K   ++ A+ +FD M+  ++V +N+LISGY   G+
Sbjct: 243  VHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGM 302

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV---- 669
              ++ ++  ++    ++P   +  +L+  +S +G    A  +  H+  +G+  N      
Sbjct: 303  VGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTA 362

Query: 670  ---------------------------TWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                                       +W ++ISG  QN     ++  F QMQ  +++PN
Sbjct: 363  LTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPN 422

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              T+SS L  C  LG L  GK +H +        + YV T LIDMY K G++  AR +F 
Sbjct: 423  PLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFD 482

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
               NK + SWN MI G+ ++G G EA+ L+ ++++    P + TF ++L AC + GLV+E
Sbjct: 483  SMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKE 542

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP-DATIWGALLGS 881
            G   F SM++DY I P IEH +CMVDLLG+AG L EA++ I   P       IWGALLG+
Sbjct: 543  GTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGA 602

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C +H   + A++AS++LF+LEP N+  Y L+ NL     ++ +   +R       +    
Sbjct: 603  CMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTP 662

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              + I+I    HVF A    HP +  IY  L  L ++M + GY PDT     D++EEEK 
Sbjct: 663  GCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKE 722

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
             ++  H+EKLAI +GL+ T+    IR+IKN RVC DCH A K +S V  R I +RD +RF
Sbjct: 723  HMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRF 782

Query: 1062 HHFREGECSCNDCW 1075
            HHFR+G CSC D W
Sbjct: 783  HHFRDGVCSCGDYW 796



 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 219/498 (43%), Gaps = 46/498 (9%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           ++++  HA  +  G  + +D+ V S +   Y        A K F    S     W++ L 
Sbjct: 140 AALRPLHALAVASG--FAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLA 197

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFR-SRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
                G    E LE +  + G G +   S  L  +L    ++    +G  VHA   K G 
Sbjct: 198 -----GLSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGL 252

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
               H+   L++ Y KC D+E A  LF  +    D + +N +I     N    ++++LF+
Sbjct: 253 AQHEHVVTGLISLYAKCGDMECARHLFDRMEG-PDLVTYNALISGYSINGMVGSSVELFK 311

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           E+     +  S T+V ++   +  G       +H +V+K+ L++N  V   L ++Y R N
Sbjct: 312 ELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFN 371

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            ++ A R FD+M +  + S                                   WN ++S
Sbjct: 372 DMDSARRAFDAMPEKTMES-----------------------------------WNAMIS 396

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
           G+  +G  +  + L + MQ+L  RPN  ++S  L A  +L  L  G+  H  I    L+ 
Sbjct: 397 GYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLEL 456

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           ++YV T+L+DMYVK   +  A+ +FD+M N+N+V+WN +ISGY   G    A K+   M 
Sbjct: 457 NVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMM 516

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENY 684
           +  + P   ++ S++   S  G  KE   +   M +  GI P +   T ++    +    
Sbjct: 517 DAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQL 576

Query: 685 RESLKFFIQMQQEDIKPN 702
           +E+ +   +  +  + P 
Sbjct: 577 KEAFELISEFPKSAVGPG 594



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 7/165 (4%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           + +H L + +GF  D +VA+ L  +Y        AR+VF    +     WN ++ G    
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL--- 199

Query: 783 GNGKEAILLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G EA+  F  +   G  +PD+ T  ++L A         G +   +      +     
Sbjct: 200 -SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMG-RCVHAFGEKCGLAQHEH 257

Query: 842 HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
             + ++ L  K G ++ A      M   PD   + AL+    I+G
Sbjct: 258 VVTGLISLYAKCGDMECARHLFDRME-GPDLVTYNALISGYSING 301


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/811 (29%), Positives = 397/811 (48%), Gaps = 77/811 (9%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +  L  K   F    + HA  I  G+ FD+     L            A  LF  V    
Sbjct: 15   LFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPK-P 73

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAK---VGAFHEG 415
            D  L+N ++     N+   ++I L+  ++ ++  +    T    + AC+    +   H  
Sbjct: 74   DIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLMLLHAH 133

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
              I GY       SN+ V + L+ +Y + +++  A +VFD M +                
Sbjct: 134  SIIDGY------GSNVFVGSALVDLYCKFSRVVYARKVFDGMPER--------------- 172

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                D + WN +++G   +  + + + L R M + G R + S+V
Sbjct: 173  --------------------DTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTV 212

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            + VL A  EL+ LK G       L+ G  +  YV T L+ +Y K   +  A+ +F  +  
Sbjct: 213  TAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINR 272

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
             +++A+N++ISG+   G    + K+  ++     +    +   L+  +S +G    A  I
Sbjct: 273  PDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSI 332

Query: 656  IHHMKNSGIYPN-------------------------------VVTWTSLISGSLQNENY 684
                  SGI  N                               VV W ++ISG  QN + 
Sbjct: 333  HGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGST 392

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
              ++  F +M + +  PN+ T++++L  C  LG L  GK +H L        + YV+T L
Sbjct: 393  ETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTAL 452

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMY+K GN+  A ++F   + K   +WN MI G+ ++G G EA+ L++E+L  G+ P A
Sbjct: 453  VDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSA 512

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +TF ++L AC ++GLV EG + F +M   Y I P IEHY+CMVD+LG++G L++A +FI+
Sbjct: 513  VTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIK 572

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             MP +P   +WG LLG+C IH   + A +AS RLF+L+P +   Y L+ N+ ++   +  
Sbjct: 573  KMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPK 632

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
               +R  + +  +      + I+++   HVF +    H    +IY +L  L  +M+++GY
Sbjct: 633  AASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGY 692

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
              +T     D++EEEK   +  H+EKLAI +GL+ T+    IR+IKN RVC DCHTA K+
Sbjct: 693  QAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKF 752

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S +  R I +RD  RFHHF++G CSC D W
Sbjct: 753  ISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 148/578 (25%), Positives = 256/578 (44%), Gaps = 63/578 (10%)

Query: 199 NETNKFRCLSSVKSKHAQMIKMGKI---WNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYF 254
           N T  F   +    KH  ++    I   + S+  V S L+  Y +F     A K F    
Sbjct: 111 NFTYAFAVAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMP 170

Query: 255 SRSYADWSSFLEDYESFGGEVQ-----ELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
            R    W++ +       G V+     + ++++ E+   GV   S  +T +L    +L  
Sbjct: 171 ERDTVLWNTMIN------GLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQE 224

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
             +G+ +    +K GF F  ++   L++ Y KC DV +A  LF  + +  D + +N +I 
Sbjct: 225 LKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRI-NRPDLIAYNAMIS 283

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
               N   E ++KLFRE+ FS  +  S TIV ++   +  G  H    IHG+ +KS +  
Sbjct: 284 GFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIIL 343

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           N +V     ++Y++ N+++LA  +FD   +  + +WN+MIS YT  G  + A SLF +M 
Sbjct: 344 NPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMM 403

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
            +   P+ +T                                   ++ +L A  +L  L 
Sbjct: 404 KTEFTPNAVT-----------------------------------ITTILSACAQLGSLS 428

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
           +G+  H  I    L+ ++YV T+L+DMY K   +  A ++FD+M  +N V WN++I GY 
Sbjct: 429 FGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYG 488

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNV 668
             G    A K+ N+M      P  V++ S++   S  G   E   I H+M N   I P +
Sbjct: 489 LHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLI 548

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
             +  ++    ++    ++L+F  +M    ++P      +LL  C    ++    +I  L
Sbjct: 549 EHYACMVDILGRSGQLEKALEFIKKMP---VEPGPAVWGTLLGAC----MIHKDTDIARL 601

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
             +  F  D     G +  Y    N+ S    F K+A+
Sbjct: 602 ASERLFELDP----GSVGYYVLLSNIYSVERNFPKAAS 635


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/586 (35%), Positives = 335/586 (57%), Gaps = 38/586 (6%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M  LG +P+  +   +++A + LR  ++G   H  +++ G    +++  SL+ MY K D 
Sbjct: 1    MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCF-----------------------KGLFVNAKK 619
             + +++VFD M ++N V+W+++I G C                        +G  +NA  
Sbjct: 61   YELSRQVFDEMPDKNAVSWSAII-GACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMA 119

Query: 620  MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA--------LVIIHHMKNSGIYPNVVTW 671
             +   EE +    +V  N L    S+  QS  A        + +   + +  +  ++VTW
Sbjct: 120  CVRSHEEADDVYRVVVENGLDFDQSV--QSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             + I   ++ +   E+L    QM  + I P++ T+  +++ C  L   Q    +H + + 
Sbjct: 178  ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI-IT 236

Query: 732  NGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
             GF  +  +A  T LID+Y K G+L  AR+VF     + + +W+ MI G+ ++G G+EA+
Sbjct: 237  TGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREAL 296

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             LF ++ +   +PD ITF ++L+AC +SGLV EGW+ F+SM+ D+ + P  EHY+CMVD+
Sbjct: 297  NLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDI 355

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            LG+AG LDEA DFI  MP +P+A +WGALLG+CRIH +++ AE+ +R LF L+P N+  Y
Sbjct: 356  LGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRY 415

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             ++ N+  ++ + ++ + +R  M   GVK +  +S I+I   ++ F A    HP T  IY
Sbjct: 416  VILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIY 475

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             EL  L+  +++ GY PD   V  D+DEE K  +L  H+EKLAIV+GL+     + IR+ 
Sbjct: 476  SELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIR 535

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVC DCHTA K++S V GREI +RD  RFHHF+ G CSC D W
Sbjct: 536  KNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 198/417 (47%), Gaps = 47/417 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           I+K C+ L  F  G+ +H  ++K G+   V +  +L+  YGKC   E + ++F E+ D +
Sbjct: 16  IIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPD-K 74

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W+ II   L++++ +    LFR+M  S     SR  +  L A A V +  E   ++
Sbjct: 75  NAVSWSAIIGACLQDDRCKEGFSLFRQM-LSEGSRPSRGAI--LNAMACVRSHEEADDVY 131

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             V+++ L+ + SV +    M++R  ++E+A ++FD +   +L +W + I +Y       
Sbjct: 132 RVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPL 191

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  L  +M    I PD IT                          LG          V+
Sbjct: 192 EALGLLKQMMLQGIFPDAITL-------------------------LG----------VI 216

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYD--LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           +A + L   +     HG I+  G  Y+  L V T+L+D+YVK   L  A++VFD M+ RN
Sbjct: 217 RACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERN 275

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           I+ W+++ISGY   G    A  + +QM +  +KPD +++ S++S  S  G   E     +
Sbjct: 276 IITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFN 334

Query: 658 HM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            M ++ G+ P    +  ++    +     E+  F  +M    ++PN+    +LL  C
Sbjct: 335 SMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMP---VRPNAAVWGALLGAC 388


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13880-like
            [Vitis vinifera]
          Length = 802

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 252/828 (30%), Positives = 401/828 (48%), Gaps = 80/828 (9%)

Query: 289  GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
            G+   S   T +++  T+  +   G   H  +IK  F   + L   L+  Y KC + + A
Sbjct: 14   GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 349  NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             KLF  +    + + WN +I    +   +   + LF+E + S  +    T    L  C +
Sbjct: 74   KKLFDRMPK-RNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
                  G+ IH  +  S L   + + N LI MY +  +++ A  VF+S  + +  SWNS+
Sbjct: 133  TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            I+ Y  +G  D    L  KM                     HG   N   L   +++ G 
Sbjct: 193  IAGYVRIGSNDEMLRLLVKM-------------------LRHGLNLNSYALGSALKACGS 233

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
              + S              ++ G+  HG  ++ GLD D+ VGT+L+D Y K   L++A +
Sbjct: 234  NFSSS--------------IECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATK 279

Query: 589  VFDNMKNRNIVAWNSLISGY----CFKGLFVN-AKKMLNQMEEEEIKPDLVSW------- 636
            +F  M + N+V +N++I+G+         F N A  +  +M+   +KP   ++       
Sbjct: 280  IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKAC 339

Query: 637  ----------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
                                        N+LV  YS+ G  ++ L   H    S    +V
Sbjct: 340  STIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFH----STPKLDV 395

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            V+WTSLI G +QN  +   L  F ++     KP+  T+S +L  C  L  +++G++IH  
Sbjct: 396  VSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAY 455

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             +K G      +    I MY+K G++ SA   F+++ N  + SW+ MI   A +G  KEA
Sbjct: 456  AIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEA 515

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            + LF  +  +G  P+ ITF  +L AC + GLVEEG +YF+ M  D+ I P ++H +C+VD
Sbjct: 516  VDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVD 575

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG L EA  FI    F+ D  +W +LL +CR+H   +  +  + R+ +LEP  +A+
Sbjct: 576  LLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAAS 635

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y L+ N+   +        +R+ M + GVK     SWI++  +VH F A    HP +  I
Sbjct: 636  YVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVI 695

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS-HTEKLAIVYGLMKTKSRAPIR 1027
            Y +L  ++ E+KKL Y+ D + V    + + K   ++S H+EKLA+ +G++     AP+R
Sbjct: 696  YVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVR 754

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V+KN R C  CH   K  S +  REI LRD  RFH FR+G CSC D W
Sbjct: 755  VMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 215/517 (41%), Gaps = 83/517 (16%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  SLI  Y + G    A   F          W+S +  Y   G    E+L +  ++   
Sbjct: 157 LTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSN-DEMLRLLVKMLRH 215

Query: 289 GVIFRSRILTIILKLCTKLMAFWL--GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           G+   S  L   LK C    +  +  G  +H   +K G D DV +  AL++ Y K  D+E
Sbjct: 216 GLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLE 275

Query: 347 SANKLFSEVSDLEDDLLWNEII-----MVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
            A K+F  + D  + +++N +I     M  + +E    A+ LF EMQ    K    T   
Sbjct: 276 DATKIFKLMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSS 334

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L+AC+ + AF  GKQIH  + K  L+S+  + N L+ +YS +  +E   + F S     
Sbjct: 335 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP--- 391

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                           + D+++W  L+ GH  +G ++  LTL  
Sbjct: 392 --------------------------------KLDVVSWTSLIVGHVQNGQFEGGLTLFH 419

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            +   G +P+  ++S++L A   L  +K G + H Y ++ G+     +  S + MY K  
Sbjct: 420 ELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCG 479

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            + +A   F   KN +IV+W+ +IS         NA+                       
Sbjct: 480 DIDSANMTFKETKNPDIVSWSVMISS--------NAQH---------------------- 509

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIK 700
                G +KEA+ +   MK SGI PN +T+  ++          E L++F  M+++  I 
Sbjct: 510 -----GCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGIT 564

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
           PN    + ++   G  G L    E     + +GF  D
Sbjct: 565 PNVKHSACIVDLLGRAGRLA---EAESFIMDSGFEGD 598



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 198/438 (45%), Gaps = 20/438 (4%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY- 268
           K  H   +K+G   + D +V  +L+  Y + GD   A K F L    +   +++ +  + 
Sbjct: 243 KMLHGCAVKLG--LDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFL 300

Query: 269 --ESFGGE-VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             E+   E   E + ++ E+  +G+       + ILK C+ + AF  G ++HA + K   
Sbjct: 301 QMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNL 360

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
             D  +  AL+  Y     +E   K F     L D + W  +I+  ++N ++E  + LF 
Sbjct: 361 QSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL-DVVSWTSLIVGHVQNGQFEGGLTLFH 419

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           E+ FS  K    TI  ML ACA + A   G+QIH Y +K+ + +   + N  I MY++  
Sbjct: 420 ELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCG 479

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            ++ A   F   K+ ++ SW+ MISS    G    A  LF  M  S I P+ IT+  +L 
Sbjct: 480 DIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLV 539

Query: 506 GHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGR--ESHGYILRNG 562
                G  +  L     M +  G  PN    + ++       L + GR  E+  +I+ +G
Sbjct: 540 ACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDL-----LGRAGRLAEAESFIMDSG 594

Query: 563 LDYDLYVGTSLMD---MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            + D  +  SL+    ++   D  +   E    ++     ++  L + Y   G+ + A +
Sbjct: 595 FEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATE 654

Query: 620 MLNQMEEEEIKPDL-VSW 636
           + N M++  +K +  +SW
Sbjct: 655 IRNLMKDRGVKKEPGLSW 672



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 184/405 (45%), Gaps = 45/405 (11%)

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
           LG   +  + + ++Q  T    L +G+ +H ++++      L++  +L+ MY K      
Sbjct: 13  LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS--GY 643
           A+++FD M  RN+V+WNSLISGY   G +     +  +    +++ D  ++++ +S  G 
Sbjct: 73  AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132

Query: 644 SI---WGQSKEALVIIHHMKNSGIYPN--------------------------VVTWTSL 674
           ++    G+   AL+ +  +    +  N                           V+W SL
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG--LGLLQNGKEIHCLCLKN 732
           I+G ++  +  E L+  ++M +  +  NS  + S L+ CG      ++ GK +H   +K 
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN-----GKE 787
           G   D  V T L+D Y+K G+L+ A ++F+   +  +  +N MI GF            E
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 312

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
           A+ LF E+   G +P   TF+++L AC      E G K   +    YN+       + +V
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECG-KQIHAQIFKYNLQSDEFIGNALV 371

Query: 848 DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
           +L   +G +++      + P K D   W +L     I GH++  +
Sbjct: 372 ELYSLSGSIEDGLKCFHSTP-KLDVVSWTSL-----IVGHVQNGQ 410


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
          Length = 953

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/722 (32%), Positives = 365/722 (50%), Gaps = 66/722 (9%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            A  L++ M  +   A + T   ++QAC+   +  E KQ+H +VLK   +S++ V N LI+
Sbjct: 197  AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI------ 493
             +S  + +  A RVF+     +  SWNS+++ Y  +G V+ A  ++++M    I      
Sbjct: 257  CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSM 316

Query: 494  ---------------------QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                                 + D++TW+ L++    +  Y+  +    GM  +G   + 
Sbjct: 317  IVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDE 376

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
                  L A   L ++  G+  H   L+ G +  + +  +L+ MY K   +  A+++FD 
Sbjct: 377  VVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFD- 435

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
                                              E    DL+SWNS++SGY        A
Sbjct: 436  ----------------------------------EAYLLDLISWNSMISGYLKCNLVDNA 461

Query: 653  LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
              I   M       +VV+W+S+ISG  QN+ + E+L  F +MQ    KP+ TT+ S++  
Sbjct: 462  KAIFDSMPEK----DVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISA 517

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
            C  L  L+ GK +H    +NG   +  + T LIDMY K G +++A EVF     K +++W
Sbjct: 518  CARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTW 577

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            N +I+G A+ G  + ++ +F  + +    P+ ITF  +L AC++ GLV+EG  +F SM  
Sbjct: 578  NALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIH 637

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
            D+ I P ++HY CMVDLLG+AG L EA + +  MP  PD   WGALLG+C+ HG  E   
Sbjct: 638  DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGR 697

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
               R+L +L+P +   + L+ N+ A   +W+DV  +R  M +  V  +   S I+ + ++
Sbjct: 698  RVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVI 757

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            H F A    HP    I   L  +  ++K  GY PD   V  D+DEEEK   L  H+EKLA
Sbjct: 758  HEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLA 817

Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
            I +GL+      PIR++KN R+C+DCHTAAK +S    R+I +RD  RFHHF +G  +  
Sbjct: 818  IAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQGGQAIT 877

Query: 1073 DC 1074
             C
Sbjct: 878  VC 879



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 202/397 (50%), Gaps = 17/397 (4%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           +++  +G    V  A KLF E+  LE D++ W+ +I    +NE +E AI+ F  M     
Sbjct: 315 SMIVLFGMRGLVVEACKLFDEM--LEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 372

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                  V  L ACA +   + GK IH   LK   ES +++ N LI MYS+   + +A +
Sbjct: 373 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 432

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +FD     +L SWNSMIS Y     VD A ++F+ M     + D+++W+ ++SG+  +  
Sbjct: 433 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP----EKDVVSWSSMISGYAQNDL 488

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
           +   L L + MQ  GF+P+ +++  V+ A   L  L+ G+  H YI RNGL  ++ +GT+
Sbjct: 489 FDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTT 548

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+DMY+K  C++ A EVF  M  + I  WN+LI G    GL  ++  M + M++  + P+
Sbjct: 549 LIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPN 608

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHH----MKNSGIYPNVVTWTSLISGSLQNENYRESL 688
            +++  ++      G   E     HH    + +  I PNV  +  ++    +    +E+ 
Sbjct: 609 EITFMGVLGACRHMGLVDEGQ---HHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAE 665

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           +   +M    + P+  T  +LL  C   G  + G+ +
Sbjct: 666 ELLNRMP---MTPDVATWGALLGACKKHGDSEMGRRV 699



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 31/305 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S+I  +   G    A K F     +    WS+ +  ++      +E +  +  +H  GV+
Sbjct: 315 SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQ-NEMYEEAIRTFVGMHKIGVM 373

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
               +    L  C  L+   +G  +H+  +K G +  ++L+ AL+  Y KC D+  A KL
Sbjct: 374 VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKL 433

Query: 352 FSEVSDLE------------------------------DDLLWNEIIMVKLRNEKWENAI 381
           F E   L+                              D + W+ +I    +N+ ++  +
Sbjct: 434 FDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETL 493

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            LF+EMQ S  K    T+V ++ ACA++ A  +GK +H Y+ ++ L  N+ +   LI MY
Sbjct: 494 ALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY 553

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            +   +E A  VF  M +  +S+WN++I      G V+ +  +F+ M    + P+ IT+ 
Sbjct: 554 MKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFM 613

Query: 502 CLLSG 506
            +L  
Sbjct: 614 GVLGA 618



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 8/170 (4%)

Query: 665 YPNVVTWTSLISGS----LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
           YP   TW      S    +Q  +   +   +  M    +  ++ T   L+Q C       
Sbjct: 171 YPQANTWKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEW 230

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             K++H   LK GF  D YV   LI+ +S   N+  A  VF +S+     SWN ++ G+ 
Sbjct: 231 EAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYI 290

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
             GN +EA  ++H++ E       I   +++      GLV E  K FD M
Sbjct: 291 EIGNVEEAKHIYHQMPERSI----IASNSMIVLFGMRGLVVEACKLFDEM 336


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/659 (34%), Positives = 351/659 (53%), Gaps = 55/659 (8%)

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG-------S 512
            H+  S N +I+    +G + V ++ ++    +R+  D++TWN +L              S
Sbjct: 8    HHKPSLNKLIAHVLSMGSLGVGYA-YSVFAHTRVL-DVLTWNSMLRAFVNSNMPRRALQS 65

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            Y  +L   R +      P+  +   +L+    L   K G+  HG +++  L  DLY+ T+
Sbjct: 66   YTEMLERSRNV------PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETT 119

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L++MY     L++A+ +F+ M +RN V W S+ISGY        A  +  +MEE+   PD
Sbjct: 120  LLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPD 179

Query: 633  LVSWNSLVSG-----------------------------------YSIWGQSKEALVIIH 657
             V+  +LVS                                    Y+  G  K A  +  
Sbjct: 180  EVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFD 239

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSSLLQTCGGL 716
             + +  +Y     W++LI G ++N    E+L+ F ++    +++PN  T+ +++  C  L
Sbjct: 240  QLSDKDVY----AWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQL 295

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
            G L+ G+ +H    +        +   LIDM+SK G++ +A+ +F   + K L SWN M+
Sbjct: 296  GDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMV 355

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G A++G G+EA+  FH +  T  QPD ITF  +L AC ++GLV+EG K F  +   Y +
Sbjct: 356  NGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGV 415

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
                EHY CMVDLL +AG L EA +FIR MP +PD  IWG++LG+CR++ +LE  E A+R
Sbjct: 416  RLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAAR 475

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             L +LEP N   Y L+ N+ A    W +V+++R  M+E G++     S + ID I H F 
Sbjct: 476  CLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFL 535

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            A    HP   EI   L  +  ++K +GYV DT  V  +ID+ +K + +  H+EKLA+ YG
Sbjct: 536  AGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYG 595

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+K++    I ++KN RVCSDCHT  K +S +  R+I LRD  RFHHF++G CSC D W
Sbjct: 596  LLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 170/353 (48%), Gaps = 35/353 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C  L+ F +G  +H  ++K     D++++  L+N Y  C D++SA  LF  +    
Sbjct: 85  LLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGH-R 143

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + ++W  +I   ++N     A+ L+++M+         T+  ++ ACA++     G ++H
Sbjct: 144 NKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLH 203

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            ++ +  ++    + + L++MY++   L+ A +VFD + D ++ +W+++I  Y       
Sbjct: 204 SHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRST 263

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  LF ++                      GS                RPN  ++  V+
Sbjct: 264 EALQLFREVAG--------------------GS--------------NMRPNEVTILAVI 289

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A  +L  L+ GR  H YI R    + + +  SL+DM+ K   +  A+ +FD+M  ++++
Sbjct: 290 SACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLI 349

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
           +WNS+++G    GL   A    + M+  +++PD +++  +++  S  G  +E 
Sbjct: 350 SWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 200/482 (41%), Gaps = 83/482 (17%)

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQI 418
           D L WN ++   + +     A++ + EM   S     R T   +L+ CA +  F  GK +
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           HG V+K  L S+L +   L++MY+    L+ A  +F+ M   N   W SMIS Y      
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
           + A  L+ KM      PD +T   L+S                                 
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVS--------------------------------- 188

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
             A  EL+ L  G + H +I    +     +G++L++MY K   L+ A++VFD + ++++
Sbjct: 189 --ACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDV 246

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQME-EEEIKPDLVS------------------W--- 636
            AW++LI GY        A ++  ++     ++P+ V+                  W   
Sbjct: 247 YAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHD 306

Query: 637 --------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                         NSL+  +S  G    A  I   M     Y ++++W S+++G   + 
Sbjct: 307 YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMS----YKDLISWNSMVNGLALHG 362

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI--HCLCLKNGFIKDAYV 740
             RE+L  F  MQ  D++P+  T   +L  C   GL+Q GK++      L    +K  + 
Sbjct: 363 LGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY 422

Query: 741 ATGLIDMYSKSGNLKSAREVFR-KSANKTLASWNCMIMGFAIYGN---GKEAILLFHELL 796
              ++D+  ++G L  ARE  R        A W  M+    +Y N   G+EA     EL 
Sbjct: 423 GC-MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELE 481

Query: 797 ET 798
            T
Sbjct: 482 PT 483



 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 174/346 (50%), Gaps = 7/346 (2%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H Q++K   + +SD  +++ + + Y   GD  SA   F     R+   W+S +  Y 
Sbjct: 99  KVLHGQVVKY--MLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYM 156

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
                 + LL ++ ++   G       +  ++  C +L    +G+++H+ + +       
Sbjct: 157 KNHCPNEALL-LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICA 215

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            L  AL+N Y KC D+++A ++F ++SD +D   W+ +I   ++N +   A++LFRE+  
Sbjct: 216 VLGSALVNMYAKCGDLKTARQVFDQLSD-KDVYAWSALIFGYVKNNRSTEALQLFREVAG 274

Query: 390 -SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            S+ +    TI+ ++ ACA++G    G+ +H Y+ ++    ++S+ N LI M+S+   ++
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDID 334

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A R+FDSM   +L SWNSM++     G    A + F+ M ++ +QPD IT+  +L+   
Sbjct: 335 AAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACS 394

Query: 509 THGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRE 553
             G  Q    L   +++L G R        ++  +    LL   RE
Sbjct: 395 HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEARE 440


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 233/706 (33%), Positives = 358/706 (50%), Gaps = 80/706 (11%)

Query: 411  AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
               E +++H  +    L+ N  + N L+  YS++  L  A   F  +  HN  SWN    
Sbjct: 47   GLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWN---- 102

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
                                            L++ +  +G  +   TL   M S G RP
Sbjct: 103  -------------------------------ILMAAYAQNGHPRGAATLFHWMCSQGVRP 131

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  ++S  L A T  R L  GR+ +  I    L+ D +V +SL+ MY +   ++ A+  F
Sbjct: 132  NAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAF 191

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------- 642
            D    +++V W ++IS Y        A +++ +M+ E IK  L ++ SL+          
Sbjct: 192  DRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLR 251

Query: 643  ----------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                                        Y   G+  +A  ++  M         V+WT++
Sbjct: 252  NGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMP----VRTSVSWTAM 307

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-G 733
            I+   QN N  E++  F  M  E  +P+  T+ S++ +C  LG L  GK IH     +  
Sbjct: 308  IAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPS 367

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFR--KSANKTLASWNCMIMGFAIYGNGKEAILL 791
            F +   +   +I MY K GNL+ AREVF       +++ +W  MI  +A  G G+EAI L
Sbjct: 368  FSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIEL 427

Query: 792  FHELL-ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            F E+L + G +P+ +TF ++L AC + G +E+ W++F SM  D+ + P  +HY C+VDLL
Sbjct: 428  FQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLL 487

Query: 851  GKAGYLDEAWDFI-RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            G+AG L EA   + R   F+ D   W A L +C+++G LE ++ A++R+ +LEP N A  
Sbjct: 488  GRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGR 547

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N+ A   R  DV R+R+ M   GVK     SWI+I+  VH F      HP   EIY
Sbjct: 548  VLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIY 607

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             EL  L  E+K+ GYVPDT+ V +D+DEE+K ++L  H+E+LA+  G++ T     +RV+
Sbjct: 608  SELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVV 667

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVCSDCH A K++S + GR+I +RD +RFHHF++G CSC D W
Sbjct: 668  KNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 158/369 (42%), Gaps = 33/369 (8%)

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
           + R L   R+ H  I    LD + ++G  L+D Y K+  L  AQ  F  +   N  +WN 
Sbjct: 44  QCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNI 103

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ-----------SKEA 652
           L++ Y   G    A  + + M  + ++P+ V+ ++ +   +               + EA
Sbjct: 104 LMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEA 163

Query: 653 LVIIHHMKNSGIY--------------------PNVVTWTSLISGSLQNENYRESLKFFI 692
           L I  H+++S I                      +VV WT++IS    N     +L+   
Sbjct: 164 LEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVR 223

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKS 751
           +M  E IK    T  SLL  C     L+NG   H      G  + + V  G L+++Y K 
Sbjct: 224 RMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKC 283

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G +  AR V      +T  SW  MI  +A  GN  EAI LF  +   G +P  IT  +++
Sbjct: 284 GRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVV 343

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            +C   G +  G +    + +  +   ++   + ++ + GK G L+ A +    +P +  
Sbjct: 344 DSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTR 403

Query: 872 ATI-WGALL 879
           + + W A++
Sbjct: 404 SVVTWTAMI 412



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 191/453 (42%), Gaps = 43/453 (9%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           R L  V+  HAQ I   K+  +  +   L+  Y + G    A  AF      +   W+  
Sbjct: 46  RGLDEVRKLHAQ-IAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNIL 104

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +  Y    G  +    ++  +  +GV   +  L+  L  CT      LG +++  +    
Sbjct: 105 MAAYAQ-NGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEA 163

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            + D H++ +L+  YG+CR++E A + F   S  +D + W  +I     N +   A++L 
Sbjct: 164 LEIDSHVESSLITMYGRCREIEEAERAFDR-SPEKDVVCWTAMISAYAHNWRTSRALELV 222

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSR 443
           R M     K    T V +L ACA       G   H       L+ S+  V   L+++Y +
Sbjct: 223 RRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGK 282

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
             +++ A RV D+M      SW +MI++Y   G    A +LF  M+    +P  IT   L
Sbjct: 283 CGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDIT---L 339

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN-G 562
           +S                                V+ +   L  L  G+  H  I  +  
Sbjct: 340 IS--------------------------------VVDSCAVLGTLSLGKRIHARIRSSPS 367

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFD--NMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
               L +  +++ MY K   L+ A+EVF+   ++ R++V W ++I  Y   G+   A ++
Sbjct: 368 FSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIEL 427

Query: 621 LNQME-EEEIKPDLVSWNSLVSGYSIWGQSKEA 652
             +M  +   +P+ V++ S++   S  GQ ++A
Sbjct: 428 FQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQA 460


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 793

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 246/807 (30%), Positives = 408/807 (50%), Gaps = 85/807 (10%)

Query: 313  GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            G   HA +IK  F+  + L    +N Y K  ++ +A KLF  +S+    + +N +I    
Sbjct: 28   GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSE-RSVISYNILISGYG 86

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
                +  AI LF E + +  K    +   +L AC ++  F  GK IHG  +   L   + 
Sbjct: 87   GMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVF 146

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            + N LI MY +  +++ A  +F+S                                    
Sbjct: 147  LTNLLIDMYCKCERIDHARLLFESSD---------------------------------- 172

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA--VTELRLLKY 550
             + D ++WN L++G+   G+Y+ +L LL  M   G R N  ++   L++  +    ++ Y
Sbjct: 173  -ELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSY 231

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            G+  HGY ++ GLD D+ VGT+L+DMY K   L +A ++F    N+N+V +N++I+G+  
Sbjct: 232  GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291

Query: 611  -----KGLFVNAKKMLNQMEEEEIKPDLVSWNS--------------------------- 638
                 K     A K+ +QM+ + IKP   +++S                           
Sbjct: 292  TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ 351

Query: 639  --------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
                    L+  YS+ G +++ L       NS    ++V+WT++I+G  QN  +  +L  
Sbjct: 352  SDEFIGSTLIELYSLLGSTEDQLKCF----NSTPKLDIVSWTTMIAGYAQNGQFESALAL 407

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F ++     KP+   ++++L  C  +   ++G+++H   +K G    A V    I MY+K
Sbjct: 408  FYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAK 467

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
            SGNL SA+  F +  N  + SW+ MI   A +G+ K+AI LF  +   G  P+ ITF  +
Sbjct: 468  SGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGV 527

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L AC + GLVEEG +Y++SM  DY++   ++H +C+VDLL +AG L +A +FI    F  
Sbjct: 528  LTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGD 587

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
               +W  LL  CRI+  +   +  + +L +L+P  S++Y L+ N+   +       ++R 
Sbjct: 588  HPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRE 647

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
             M + G++     SWI++   VH F      HP +  IY +L  ++ + +K+GY+ D + 
Sbjct: 648  LMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYI-DQKI 706

Query: 991  VYQDIDEEE-KGKVLLS-HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
                I  +E KG + ++ H+EKLA+ +G++     AP++V+KN RVC DCH   K +S+V
Sbjct: 707  QNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVV 766

Query: 1049 RGREIFLRDGARFHHFREGECSCNDCW 1075
              REI LRD  RFHHF+EG CSCND W
Sbjct: 767  EKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 244/534 (45%), Gaps = 85/534 (15%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           K++Q  +K G+   GK  H +++K+A    L + N  +++YS+  ++  A ++FD M + 
Sbjct: 14  KLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSER 73

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           ++ S+N +IS Y G+G+   A  LF++   +          CL    F++          
Sbjct: 74  SVISYNILISGYGGMGFYHKAIGLFSEARMA----------CLKLDKFSYAG-------- 115

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
                            VL A  +++    G+  HG  +  GL   +++   L+DMY K 
Sbjct: 116 -----------------VLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKC 158

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK---------- 630
           + + +A+ +F++    + V+WNSLI+GY   G +    K+L +M    ++          
Sbjct: 159 ERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSAL 218

Query: 631 -------PDLVSWNSLVSGYSI--------------------WGQSKEALVIIHHMKNSG 663
                   ++VS+   + GY++                     G   +A+ +     N  
Sbjct: 219 KSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQ- 277

Query: 664 IYPNVVTWTSLISGSLQNENYR-----ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
              NVV + ++I+G +Q E+       E+LK F QMQ++ IKP+  T SS+++ C  +  
Sbjct: 278 ---NVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEA 334

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            + GK+IH    K+    D ++ + LI++YS  G+ +   + F  +    + SW  MI G
Sbjct: 335 FEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAG 394

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD-SMSTDYNII 837
           +A  G  + A+ LF+ELL +G +PD    T +L+AC +      G +    ++ T    +
Sbjct: 395 YAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTL 454

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             ++  +  + +  K+G LD A      +   PD   W  ++ S   HGH + A
Sbjct: 455 AIVQ--NSQISMYAKSGNLDSAKITFEEIK-NPDVVSWSVMICSNAQHGHAKDA 505



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 131/585 (22%), Positives = 250/585 (42%), Gaps = 75/585 (12%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y ++G+  +A K F     RS   ++  +  Y   G    + + ++ E     +      
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMG-FYHKAIGLFSEARMACLKLDKFS 112

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              +L  C ++  F LG  +H   I  G    V L   L++ Y KC  ++ A  LF E S
Sbjct: 113 YAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLF-ESS 171

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC--AKVGAFHE 414
           D  D++ WN +I    R   +E  +KL  +M  +  +  + T+   L++C          
Sbjct: 172 DELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSY 231

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           GK +HGY +K  L+ ++ V   L+ MY++   L  A ++F +  + N+  +N+MI+ +  
Sbjct: 232 GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGF-- 289

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                             IQ + I   C         +Y+  L L   MQ  G +P+  +
Sbjct: 290 ------------------IQTEDIDKEC---------AYE-ALKLFSQMQRQGIKPSDFT 321

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            S +++    +   +YG++ H +I ++ +  D ++G++L+++Y      ++  + F++  
Sbjct: 322 FSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTP 381

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------- 632
             +IV+W ++I+GY   G F +A  +  ++     KPD                      
Sbjct: 382 KLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQ 441

Query: 633 -------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                         +  NS +S Y+  G    A +    +KN    P+VV+W+ +I  + 
Sbjct: 442 VHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKN----PDVVSWSVMICSNA 497

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK-DA 738
           Q+ + ++++  F  M+   I PN  T   +L  C   GL++ G   +    K+  +K + 
Sbjct: 498 QHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINV 557

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIY 782
              T ++D+ S++G L  A+     S        W  ++ G  IY
Sbjct: 558 KHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIY 602



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 12/321 (3%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYF 254
           C+LN  N    +S  K+ H   +K G   + D +V  +L+  Y + G    A + F    
Sbjct: 221 CYLNLNNM---VSYGKTLHGYTVKQG--LDLDIVVGTALLDMYAKTGYLGDAIQLFRTSP 275

Query: 255 SRSYADWSSFLEDY---ESFGGEVQ-ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAF 310
           +++   +++ +  +   E    E   E L+++ ++  +G+       + I+K+C  + AF
Sbjct: 276 NQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAF 335

Query: 311 WLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
             G ++HA + K     D  +   L+  Y      E   K F+    L D + W  +I  
Sbjct: 336 EYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKL-DIVSWTTMIAG 394

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             +N ++E+A+ LF E+  S  K     I  ML ACA V A   G+Q+HGY +K+ + + 
Sbjct: 395 YAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTL 454

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
             V N  ISMY+++  L+ A   F+ +K+ ++ SW+ MI S    G+   A +LF  M S
Sbjct: 455 AIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKS 514

Query: 491 SRIQPDIITWNCLLSGHFTHG 511
             I P+ IT+  +L+   +HG
Sbjct: 515 YGIHPNQITFLGVLTA-CSHG 534



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 58/113 (51%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +S   + L+Q     G   +GK  H   +K  F    ++    +++YSK G + +A+++F
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            + + +++ S+N +I G+   G   +AI LF E      + D  ++  +L+AC
Sbjct: 68  DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSAC 120


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Vitis vinifera]
          Length = 613

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/564 (37%), Positives = 307/564 (54%), Gaps = 47/564 (8%)

Query: 552  RESHGYILRNGL-----DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            R+ H + +R+G+     D   Y+  +L+        +  A ++F  ++N NI  WN++I 
Sbjct: 57   RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFC---SPMSYAHQIFSQIQNPNIFTWNTMIR 113

Query: 607  GYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------------ 636
            GY      + A ++  QM    I+PD  ++                              
Sbjct: 114  GYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES 173

Query: 637  -----NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
                 N+LV  Y+  G ++ A  +   M       N+VTW S+I+G   N    E+L  F
Sbjct: 174  LVFVQNTLVHMYAACGHAESAHKLFELMAER----NLVTWNSVINGYALNGRPNEALTLF 229

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             +M    ++P+  TM SLL  C  LG L  G+  H   +K G   + +    L+D+Y+K 
Sbjct: 230  REMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKC 289

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            G+++ A +VF +   K++ SW  +I+G A+ G GKEA+ LF EL   G  P  ITF  +L
Sbjct: 290  GSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVL 349

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             AC + G+V+EG+ YF  M  +Y I+P IEHY CMVDLLG+AG + +A +FI+ MP +P+
Sbjct: 350  YACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPN 409

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A +W  LLG+C IHGHL   E+A  +L +LEP +S +Y L+ NL A   RW DV ++R +
Sbjct: 410  AVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRT 469

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M   GVK     S +++   +H F      HP T EIY +L  +   +K  GYVP    V
Sbjct: 470  MLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNV 529

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              DI+EEEK   L  H+EK+AI + L+ T +  PIRV+KN RVC+DCH A K +S V  R
Sbjct: 530  LADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDR 589

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD +RFHHF++G CSC D W
Sbjct: 590  EIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 197/415 (47%), Gaps = 48/415 (11%)

Query: 315 EVHASLIKRGF-----DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
           ++HA  I+ G      D   +L   L++F   C  +  A+++FS++ +  +   WN +I 
Sbjct: 58  QIHAFSIRHGVPLTNPDMGKYLIFTLLSF---CSPMSYAHQIFSQIQN-PNIFTWNTMIR 113

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
               +E    A++L+R+M  S  +  + T   +L+A AK+    EG+++H   +++  ES
Sbjct: 114 GYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES 173

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
            + V N L+ MY+                                 G+ + A  LF  M 
Sbjct: 174 LVFVQNTLVHMYA-------------------------------ACGHAESAHKLFELM- 201

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
               + +++TWN +++G+  +G     LTL R M   G  P+G ++  +L A  EL  L 
Sbjct: 202 ---AERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALA 258

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            GR +H Y+++ GLD +L+ G +L+D+Y K   ++ A +VFD M+ +++V+W SLI G  
Sbjct: 259 LGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLA 318

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNV 668
             G    A ++  ++E + + P  +++  ++   S  G   E       MK   GI P +
Sbjct: 319 VNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKI 378

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             +  ++    +    +++ +F   +Q   ++PN+    +LL  C   G L  G+
Sbjct: 379 EHYGCMVDLLGRAGLVKQAHEF---IQNMPMQPNAVVWRTLLGACTIHGHLALGE 430



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 174/375 (46%), Gaps = 33/375 (8%)

Query: 127 SSQLTRQNTAIVMPKLHSIYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQA 186
           S+QL RQ    ++P  HS   HF+   S +         +   SP S  L     L    
Sbjct: 3   SNQLGRQP---LIPT-HSPRKHFSFTISTS---------TCPESPKSYILKKCIALL--- 46

Query: 187 QLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSA 246
            LSC SS F       KFR +      HA  I+ G    + DM K LIF  L F    S 
Sbjct: 47  -LSCASSKF-------KFRQI------HAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSY 92

Query: 247 AKAFFLYFSR-SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           A   F      +   W++ +  Y      +  L E++ ++H   +   +     +LK   
Sbjct: 93  AHQIFSQIQNPNIFTWNTMIRGYAESENPMPAL-ELYRQMHVSCIEPDTHTYPFLLKAIA 151

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
           KLM    G +VH+  I+ GF+  V ++  L++ Y  C   ESA+KLF  +++  + + WN
Sbjct: 152 KLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAE-RNLVTWN 210

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I     N +   A+ LFREM     +    T+V +L ACA++GA   G++ H Y++K 
Sbjct: 211 SVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKV 270

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
            L+ NL   N L+ +Y++   +  A +VFD M++ ++ SW S+I      G+   A  LF
Sbjct: 271 GLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELF 330

Query: 486 NKMNSSRIQPDIITW 500
            ++    + P  IT+
Sbjct: 331 KELERKGLMPSEITF 345


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/661 (34%), Positives = 349/661 (52%), Gaps = 59/661 (8%)

Query: 460  HNLSSWNSMISSYTGLGYVDV--AWSLFNKMNSSRIQPDIITWNCLLSGHFTHG------ 511
            H+  S N +I+    +G + V  A+S+F        + D++TWN +L             
Sbjct: 8    HHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTR----ELDVLTWNSMLRAFVNSNMPRRAL 63

Query: 512  -SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
             SY  +L   R +      P+  +   +L+    L   K G+  HG +++  L  DLY+ 
Sbjct: 64   QSYTEMLERSRNV------PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIE 117

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            T+L++MY     L++A+ +F+ M +RN V W S+ISGY        A  +  +MEE+   
Sbjct: 118  TTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFS 177

Query: 631  PDLVSWNSLVSG-----------------------------------YSIWGQSKEALVI 655
            PD V+  +LVS                                    Y+  G  K A  +
Sbjct: 178  PDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQV 237

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSSLLQTCG 714
               + +  +Y     W++LI G ++N    E+L+ F ++    +++PN  T+ +++  C 
Sbjct: 238  FDKLSDKDVY----AWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACA 293

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             LG L+ G+ +H    +        +   LIDM+SK G++ +A+ +F   + K L SWN 
Sbjct: 294  QLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNS 353

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            M+ GFA++G G+EA+  F  +  T  QPD ITF  +L AC ++GLV+EG K F  +   Y
Sbjct: 354  MVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALY 413

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             +    EHY CMVDLL +AG L EA +FIR MP +PD  IWG++LG+CR++ +LE  E A
Sbjct: 414  GVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEA 473

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            +R L KLEP N   Y L+ N+ A    W +V+++R  M+E G++     S + ID I H 
Sbjct: 474  ARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHS 533

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F A    HP   EI   L  +  ++K  GYV DT  V  +ID+ +K + +  H+EKLA+ 
Sbjct: 534  FLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALC 593

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            YGL+K++    I ++KN RVCSDCHT  K +S +  R+I LRD  RFHHF++G CSC D 
Sbjct: 594  YGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDY 653

Query: 1075 W 1075
            W
Sbjct: 654  W 654



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/474 (22%), Positives = 216/474 (45%), Gaps = 44/474 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C  L+ F +G  +H  ++K     D++++  L+N Y  C D++SA  LF  +    
Sbjct: 85  LLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGH-R 143

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + ++W  +I   ++N     A+ L+++M+         T+  ++ ACA++     G ++H
Sbjct: 144 NKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLH 203

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            ++ +  ++    + + L++MY++   L+ A +VFD + D ++ +W+++I  Y       
Sbjct: 204 SHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRST 263

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  LF ++                      GS                RPN  ++  V+
Sbjct: 264 EALQLFREVAG--------------------GS--------------NMRPNEVTILAVI 289

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A  +L  L+ GR  H YI R    + + +  SL+DM+ K   +  A+ +FD+M  ++++
Sbjct: 290 SACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLI 349

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +WNS+++G+   GL   A      M+  +++PD +++  +++  S  G  +E   + + +
Sbjct: 350 SWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEI 409

Query: 660 KN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
           +   G+      +  ++    +     E+ +F   M    ++P+     S+L  C     
Sbjct: 410 EALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP---LQPDGAIWGSMLGACRVYNN 466

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS---GNLKSAREVF-RKSANKT 768
           L+ G+E     LK     D  V   L ++Y+K      +K  RE+   K   KT
Sbjct: 467 LELGEEAARFLLKLEPTNDG-VYILLSNIYAKRKMWNEVKKVRELMNEKGIQKT 519



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 203/484 (41%), Gaps = 84/484 (17%)

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQAC 406
           A  +F+   +L D L WN ++   + +     A++ + EM   S     R T   +L+ C
Sbjct: 31  AYSVFAHTREL-DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC 89

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           A +  F  GK +HG V+K  L S+L +   L++MY+    L+ A  +F+ M   N   W 
Sbjct: 90  ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           SMIS Y      + A  L+ KM      PD +T   L+S                     
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVS--------------------- 188

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
                         A  EL+ L  G + H +I    +     +G++L++MY K   L+ A
Sbjct: 189 --------------ACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTA 234

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME-EEEIKPDLVS---------- 635
           ++VFD + ++++ AW++LI GY        A ++  ++     ++P+ V+          
Sbjct: 235 RQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQ 294

Query: 636 --------W-----------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                   W                 NSL+  +S  G    A  I   M     Y ++++
Sbjct: 295 LGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMS----YKDLIS 350

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI--HCL 728
           W S+++G   +   RE+L  F  MQ  D++P+  T   +L  C   GL+Q GK++     
Sbjct: 351 WNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIE 410

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR-KSANKTLASWNCMIMGFAIYGN--- 784
            L    +K  +    ++D+  ++G L  ARE  R        A W  M+    +Y N   
Sbjct: 411 ALYGVRLKSEHYGC-MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLEL 469

Query: 785 GKEA 788
           G+EA
Sbjct: 470 GEEA 473



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 174/346 (50%), Gaps = 7/346 (2%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H Q++K   + +SD  +++ + + Y   GD  SA   F     R+   W+S +  Y 
Sbjct: 99  KVLHGQVVKY--MLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYM 156

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
                 + LL ++ ++   G       +  ++  C +L    +G+++H+ + +       
Sbjct: 157 KNHCPNEALL-LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICA 215

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            L  AL+N Y KC D+++A ++F ++SD +D   W+ +I   ++N +   A++LFRE+  
Sbjct: 216 VLGSALVNMYAKCGDLKTARQVFDKLSD-KDVYAWSALIFGYVKNNRSTEALQLFREVAG 274

Query: 390 -SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            S+ +    TI+ ++ ACA++G    G+ +H Y+ ++    ++S+ N LI M+S+   ++
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDID 334

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A R+FDSM   +L SWNSM++ +   G    A + F  M ++ +QPD IT+  +L+   
Sbjct: 335 AAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACS 394

Query: 509 THGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRE 553
             G  Q    L   +++L G R        ++  +    LL   RE
Sbjct: 395 HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEARE 440



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 26/270 (9%)

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGY--SIWGQSKEALVIIHHMKNSGIYPNVVTW 671
           F++ K  LN++        ++S  SL  GY  S++  ++E               +V+TW
Sbjct: 6   FIHHKPSLNKL-----IAHVLSMGSLGVGYAYSVFAHTREL--------------DVLTW 46

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIK-PNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            S++   + +   R +L+ + +M +     P+  T  SLL+ C  L   + GK +H   +
Sbjct: 47  NSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVV 106

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
           K     D Y+ T L++MY+  G+LKSAR +F +  ++    W  MI G+       EA+L
Sbjct: 107 KYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALL 166

Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM-STDYNIIPTIEHYSCMVDL 849
           L+ ++ E GF PD +T   L++AC     +  G K    +   D  I   +   S +V++
Sbjct: 167 LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLG--SALVNM 224

Query: 850 LGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
             K G L  A      +  K D   W AL+
Sbjct: 225 YAKCGDLKTARQVFDKLSDK-DVYAWSALI 253


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
            mitochondrial [Vitis vinifera]
          Length = 623

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/588 (35%), Positives = 326/588 (55%), Gaps = 39/588 (6%)

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
            +  M+  G   +  + S +++  +    ++ G+  H +I   G +  ++V  +L++MYVK
Sbjct: 43   MDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVK 102

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS- 638
             + L+ A+++FD M  RN+V+W ++IS Y  K L   A K L  M  E ++P++ +++S 
Sbjct: 103  FNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILMFREGVRPNMFTYSSV 161

Query: 639  -------------------------------LVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                           L+  YS W     AL +   M       +
Sbjct: 162  LRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTR----D 217

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +V W S+I G  QN +  E+L  F +M++     +  T++S+L+ C GL LL+ G+++H 
Sbjct: 218  LVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHV 277

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              LK  F +D  +   LIDMY K G+L+ A   F +   K + SW+ M+ G A  G  ++
Sbjct: 278  HVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQ 335

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ LF  + E+G +P+ IT   +L AC ++GLVE+GW YF SM   + + P  EHY C++
Sbjct: 336  ALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLI 395

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG LDEA   I  M  +PD+  W  LLG+CR+H +++ A  A++++ +LEP ++ 
Sbjct: 396  DLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAG 455

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y L+ N+ A + RWEDV  +R +M   G++     SWI++D+ +HVF      HP   E
Sbjct: 456  TYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEE 515

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I   L  L+  +  +GYVPDT  V QD++ E+K   L  H+EKLAI++GLM       +R
Sbjct: 516  IVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVR 575

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + KN R+C DCH  AK +S +  R I +RD  R+HHF++G CSC D W
Sbjct: 576  IRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 204/475 (42%), Gaps = 111/475 (23%)

Query: 376 KWE--NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           +W+   A++    M+     A + T  ++++ C+  GA  EGK++H ++     E  + V
Sbjct: 33  QWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFV 92

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N L++MY + N LE A  +FD M + N+ SW +MIS+Y+            NK+N   +
Sbjct: 93  VNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS------------NKLNDKAL 140

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           +       CL+                  M   G RPN  + S VL+A   L  L   R+
Sbjct: 141 K-------CLIL-----------------MFREGVRPNMFTYSSVLRACDGLPNL---RQ 173

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H  I++ GL+ D++V ++L+D+Y K   L NA  VFD M  R++V WNS+I G+     
Sbjct: 174 LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSD 233

Query: 614 FVNAKKMLNQMEEE---------------------------------EIKPDLVSWNSLV 640
              A  +  +M+                                   +   DL+  N+L+
Sbjct: 234 GNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALI 293

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             Y   G  ++A      M    +  +V++W+++++G  QN   R++L+ F  M++   +
Sbjct: 294 DMYCKCGSLEDANSAFSRM----VEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSR 349

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           PN  T+  +L  C   GL++ G                                +S +++
Sbjct: 350 PNYITVLGVLFACSHAGLVEKGWYY----------------------------FRSMKKL 381

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
           F    +     + C+I      G   EA+ L HE+     +PD++T+  LL AC+
Sbjct: 382 F--GVDPGREHYGCLIDLLGRAGRLDEAVKLIHEM---ECEPDSVTWRTLLGACR 431



 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 210/465 (45%), Gaps = 56/465 (12%)

Query: 256 RSYADWSSFLEDYESFGGE--VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLG 313
           R  AD S  + ++ +F  +  +   +     +   GV   +   + ++K C+   A   G
Sbjct: 15  RYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEG 74

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV--- 370
             VH  +  +G++  + +   L+N Y K   +E A  LF E+ +  + + W  +I     
Sbjct: 75  KRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPE-RNVVSWTTMISAYSN 133

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
           KL ++  +  I +FRE      +    T   +L+AC  +      +Q+H  ++K+ LES+
Sbjct: 134 KLNDKALKCLILMFRE----GVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESD 186

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           + V + LI +YS+ + L+ A  VFD M   +L  WNS+I                     
Sbjct: 187 VFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII--------------------- 225

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQN-VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                          G F   S  N  L L + M+  GF  + ++++ VL+A T L LL+
Sbjct: 226 ---------------GGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLE 270

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            GR+ H ++L+   D DL +  +L+DMY K   L++A   F  M  +++++W+++++G  
Sbjct: 271 LGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNV 668
             G    A ++   M+E   +P+ ++   ++   S  G  ++       MK   G+ P  
Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGR 388

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +  LI    +     E++K   +M+ E   P+S T  +LL  C
Sbjct: 389 EHYGCLIDLLGRAGRLDEAVKLIHEMECE---PDSVTWRTLLGAC 430



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 47/389 (12%)

Query: 583 LQNAQEVFDNMKNRNIVA----WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           L  A    D M+   + A    ++ LI     +G     K++   +  +  +P +   N+
Sbjct: 36  LHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNT 95

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           L++ Y  +   +EA  +   M       NVV+WT++IS +  N+   ++LK  I M +E 
Sbjct: 96  LLNMYVKFNLLEEAEDLFDEMPER----NVVSWTTMIS-AYSNKLNDKALKCLILMFREG 150

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           ++PN  T SS+L+ C GL    N +++HC  +K G   D +V + LID+YSK  +L +A 
Sbjct: 151 VRPNMFTYSSVLRACDGL---PNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNAL 207

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            VF +   + L  WN +I GFA   +G EA+ LF  +   GF  D  T T++L AC    
Sbjct: 208 GVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLA 267

Query: 819 LVEEGWK-YFDSMSTDYNII---------------------------PTIEHYSCMVDLL 850
           L+E G + +   +  D ++I                             +  +S MV  L
Sbjct: 268 LLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGL 327

Query: 851 GKAGYLDEAWDFIRTMP---FKPDATIWGALLGSCRIHGHLE---YAEIASRRLFKLEPC 904
            + GY  +A +   +M     +P+      +L +C   G +E   Y   + ++LF ++P 
Sbjct: 328 AQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDP- 386

Query: 905 NSANYNLMMNLLAMSNRWEDVERLRHSMD 933
              +Y  +++LL  + R ++  +L H M+
Sbjct: 387 GREHYGCLIDLLGRAGRLDEAVKLIHEME 415



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 8/271 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +V +L+  Y++F     A   F     R+   W++ +  Y +   +  + L+    +  +
Sbjct: 92  VVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLND--KALKCLILMFRE 149

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           GV       + +L+ C  L       ++H  +IK G + DV ++ AL++ Y K  D+++A
Sbjct: 150 GVRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNA 206

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F E+    D ++WN II    +N     A+ LF+ M+ +   A   T+  +L+AC  
Sbjct: 207 LGVFDEMP-TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTG 265

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +     G+Q+H +VLK   + +L + N LI MY +   LE A   F  M + ++ SW++M
Sbjct: 266 LALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTM 323

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           ++     GY   A  LF  M  S  +P+ IT
Sbjct: 324 VAGLAQNGYSRQALELFESMKESGSRPNYIT 354


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/715 (33%), Positives = 381/715 (53%), Gaps = 49/715 (6%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +L++ A+   F  GK +H   +KS + S+  + N  +++YS+  +L  A   F S ++ N
Sbjct: 15   LLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            + S+N ++ +Y     + +A  LF+++     QPD +++N L+SG+         + L +
Sbjct: 74   VFSYNVIVKAYAKDSKIHIARQLFDEIP----QPDTVSYNTLISGYADARETFAAMVLFK 129

Query: 522  GMQSLGFRPNGSSVSVVLQAVTE-LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M+ LGF  +G ++S ++ A  + + L+K   + H + +  G D    V  + +  Y K 
Sbjct: 130  RMRKLGFEVDGFTLSGLIAACCDRVDLIK---QLHCFSVSGGFDSYSSVNNAFVTYYSKG 186

Query: 581  DCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------- 632
              L+ A  VF  M   R+ V+WNS+I  Y        A  +  +M  +  K D       
Sbjct: 187  GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246

Query: 633  ---LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY------------------------ 665
               L S + L+ G    G+  +A    +    SG+                         
Sbjct: 247  LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306

Query: 666  PNVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
            P++V W ++ISG S+  E   E++K F QMQ+   +P+  +   +   C  L      K+
Sbjct: 307  PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366

Query: 725  IHCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            IH L +K+    +   V   LI +Y KSGNL+ AR VF +       S+NCMI G+A +G
Sbjct: 367  IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            +G EA+LL+  +L++G  P+ ITF A+L+AC + G V+EG +YF++M   + I P  EHY
Sbjct: 427  HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            SCM+DLLG+AG L+EA  FI  MP+KP +  W ALLG+CR H ++  AE A+  L  ++P
Sbjct: 487  SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
              +  Y ++ N+ A + +WE++  +R SM    ++     SWI++ +  HVF AE   HP
Sbjct: 547  LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS---HTEKLAIVYGLMKT 1020
               E+   L  ++ +MKK+GYV D +      DE  +G   +    H+EKLA+ +GLM T
Sbjct: 607  MIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMST 666

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +    + V+KN R+C DCH A K+MS V GREI +RD  RFH F++G+CSC D W
Sbjct: 667  RDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 27/291 (9%)

Query: 240 FGDFTSAAKAFFLYFS------------------RSYADWSSFLEDYESFGGEVQELLEV 281
           F  ++S   AF  Y+S                  R    W+S +  Y     E  + L +
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK-EGAKALAL 227

Query: 282 WGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
           + E+  KG       L  +L   T L     G + H  LIK GF  + H+   L++FY K
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287

Query: 342 CRDVE---SANKLFSEVSDLEDDLL-WNEIIMVKLRNEKW-ENAIKLFREMQFSSAKAIS 396
           C   +    + K+F E+  L  DL+ WN +I     NE+  E A+K FR+MQ    +   
Sbjct: 288 CGGCDGMYDSEKVFQEI--LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDD 345

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN-LSVCNCLISMYSRNNKLELATRVFD 455
            + V +  AC+ + +  + KQIHG  +KS + SN +SV N LIS+Y ++  L+ A  VFD
Sbjct: 346 CSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFD 405

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            M + N  S+N MI  Y   G+   A  L+ +M  S I P+ IT+  +LS 
Sbjct: 406 RMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 126/556 (22%), Positives = 222/556 (39%), Gaps = 84/556 (15%)

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
            + G  +HA  +K       +L    +N Y KC  +  A   F    +  +   +N I+ 
Sbjct: 24  LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEE-PNVFSYNVIVK 82

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA---FHEGKQIHGYVLKSA 426
              ++ K   A +LF E+      + +  I     A     A   F   +++   V    
Sbjct: 83  AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142

Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
           L   ++ C   + +  + +   ++   FDS    N    N+ ++ Y+  G +  A S+F 
Sbjct: 143 LSGLIAACCDRVDLIKQLHCFSVSGG-FDSYSSVN----NAFVTYYSKGGLLREAVSVFY 197

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            M+  R   D ++WN ++  +  H      L L + M   GF+ +  +++ VL A+T L 
Sbjct: 198 GMDELR---DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDNMKNRNIVAWNS 603
            L  GR+ HG +++ G   + +VG+ L+D Y K    D + ++++VF  + + ++V WN+
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNT 314

Query: 604 LISGYCF-KGLFVNAKKMLNQMEEEEIKPD---LVSWNSLVSGYSIWGQSKE--ALVIIH 657
           +ISGY   + L   A K   QM+    +PD    V   S  S  S   Q K+   L I  
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374

Query: 658 HMKNSGI-------------------------YP--NVVTWTSLISGSLQNENYRESLKF 690
           H+ ++ I                          P  N V++  +I G  Q+ +  E+L  
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
           + +M    I PN  T  ++L  C   G +  G+E                          
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY------------------------- 469

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
                + +E F+         ++CMI      G  +EA      +    ++P ++ + AL
Sbjct: 470 ---FNTMKETFK--IEPEAEHYSCMIDLLGRAGKLEEAERFIDAM---PYKPGSVAWAAL 521

Query: 811 LAAC---KNSGLVEEG 823
           L AC   KN  L E  
Sbjct: 522 LGACRKHKNMALAERA 537



 Score = 43.1 bits (100), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 7/249 (2%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGD---FTSAAKAFFLYFSRSYADWSSFLEDYES 270
           H ++IK G   NS  +   LI  Y + G       + K F    S     W++ +  Y  
Sbjct: 263 HGKLIKAGFHQNSH-VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD-V 329
                +E ++ + ++   G          +   C+ L +     ++H   IK     + +
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  AL++ Y K  +++ A  +F  + +L + + +N +I    ++     A+ L++ M  
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPEL-NAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLE 448
           S       T V +L ACA  G   EG++    + ++  +E      +C+I +  R  KLE
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500

Query: 449 LATRVFDSM 457
            A R  D+M
Sbjct: 501 EAERFIDAM 509


>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 624

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/686 (33%), Positives = 366/686 (53%), Gaps = 87/686 (12%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM---------YSRNNKLELA 450
            + +LQ+C+   +F + K IHG++L++ L S++ V + L+++         +   N L  A
Sbjct: 16   LALLQSCS---SFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYA 72

Query: 451  TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
              +F  +++ NL  +N +I  ++       A+  + +M  SRI PD IT+  L+      
Sbjct: 73   YGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI------ 126

Query: 511  GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                                         +A TE+  +  G ++H  I+R G   D+YV 
Sbjct: 127  -----------------------------KASTEMECVVVGEQTHSQIVRFGFQNDVYVE 157

Query: 571  TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
             SL+ MY   +C                             GL   A ++  QM      
Sbjct: 158  NSLVHMYA--NC-----------------------------GLIAAAGRIFGQMPFR--- 183

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
             D+VSW S+V+GY   G  ++A  +   M +     N+ TW+ +I+G  +N  + +++  
Sbjct: 184  -DVVSWTSMVAGYCKCGMVEDAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDL 238

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F  M++E +  N T M S++ +C  LG L+ G+  H   +K+    +  + T L+DMY +
Sbjct: 239  FELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWR 298

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             G ++ A  VF +  +K   SW+ +I G A++G+  +AI  F +++  GF P  IT TA+
Sbjct: 299  CGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAV 358

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L+AC + GLV++G + +++M  DY I P +EHY C+VD+LG+AG L EA +FI  MP KP
Sbjct: 359  LSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKP 418

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            +A I GALLG+C+I+ + E AE     L +++P +S  Y L+ N+ A + +WE +E LR 
Sbjct: 419  NAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRD 478

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFS-AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
             M E  VK    WS I+ID  ++ FS  +   HP  G+I      ++ +++ +GY  +T 
Sbjct: 479  IMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTG 538

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
              + D+DEEEK   +  H+EKLAI YG+MKTK+   IR++KN RVC DCHTA K +S V 
Sbjct: 539  DAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVY 598

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
            GRE  +RD  RFHHFR G CSC D W
Sbjct: 599  GREFIVRDRNRFHHFRNGLCSCRDYW 624



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 37/257 (14%)

Query: 291 IFRSRI------LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           + +SRI         ++K  T++    +G + H+ +++ GF  DV+++ +L++ Y  C  
Sbjct: 110 MLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGL 169

Query: 345 VESANKLFSEVS------------------------DLEDDL------LWNEIIMVKLRN 374
           + +A ++F ++                         ++ D++       W+ +I    +N
Sbjct: 170 IAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKN 229

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             +E AI LF  M+     A    +V ++ +CA +GA   G++ H YV+KS +  NL + 
Sbjct: 230 NCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILG 289

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+ MY R  ++E A RVF+ + D +  SW+S+I      G+   A   F++M      
Sbjct: 290 TALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFS 349

Query: 495 PDIITWNCLLSGHFTHG 511
           P  IT   +LS   +HG
Sbjct: 350 PRDITLTAVLSA-CSHG 365


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/590 (37%), Positives = 319/590 (54%), Gaps = 41/590 (6%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M  LG          +L A  + R L+ G+  H ++++       Y+ T L+  Y K DC
Sbjct: 43   MAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 102

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------- 632
            L++A++V D M  +N+V+W ++IS Y   G    A  +  +M   + KP+          
Sbjct: 103  LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162

Query: 633  ----------------LVSWN---------SLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                            +V WN         SL+  Y+  GQ KEA  I   +       +
Sbjct: 163  CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER----D 218

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            VV+ T++I+G  Q     E+L+ F ++  E + PN  T +SLL    GL LL +GK+ HC
Sbjct: 219  VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              L+      A +   LIDMYSK GNL  AR +F     +T  SWN M++G++ +G G+E
Sbjct: 279  HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338

Query: 788  AILLFHELL-ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM-STDYNIIPTIEHYSC 845
             + LF  +  E   +PDA+T  A+L+ C +  + + G   FD M + +Y   P  EHY C
Sbjct: 339  VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC 398

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            +VD+LG+AG +DEA++FI+ MP KP A + G+LLG+CR+H  ++  E   RRL ++EP N
Sbjct: 399  IVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPEN 458

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            + NY ++ NL A + RW DV  +R  M +  V      SWIQ +Q +H F A    HP  
Sbjct: 459  AGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRR 518

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
             E+  ++  +  +MK+ GYVPD  CV  D+DEE+K K+LL H+EKLA+ +GL+ T    P
Sbjct: 519  EEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIP 578

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IRV KN R+C DCH  AK  S V  RE+ LRD  RFH   +G CSC D W
Sbjct: 579  IRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 196/417 (47%), Gaps = 42/417 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  C    A   G  VHA +IK  +    +L+  L+ FYGKC  +E A K+  E+ + +
Sbjct: 58  LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE-K 116

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +I    +      A+ +F EM  S  K    T   +L +C +      GKQIH
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G ++K   +S++ V + L+ MY++  +++ A  +F+ + + ++ S  ++I+ Y  LG  +
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  +F++++S  + P+ +T+  LL+                                  
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLT---------------------------------- 262

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A++ L LL +G+++H ++LR  L +   +  SL+DMY K   L  A+ +FDNM  R  +
Sbjct: 263 -ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAI 321

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           +WN+++ GY   GL     ++   M +E+ +KPD V+  +++SG S        L I   
Sbjct: 322 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDG 381

Query: 659 M--KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           M     G  P    +  ++    +     E+ +F  +M     KP +  + SLL  C
Sbjct: 382 MVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLGAC 435


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like
            [Vitis vinifera]
          Length = 703

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/651 (33%), Positives = 362/651 (55%), Gaps = 44/651 (6%)

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            N+   NS+I+ Y     + VA  LF+ M     + ++++W  L++G+F +G    VL L 
Sbjct: 61   NIVQVNSLINLYAKCDQIMVARILFDGMR----KRNVVSWGALMAGYFHNGLVLEVLRLF 116

Query: 521  RGMQSLGF-RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
            + M S+ + RPN    + ++ + ++   +  G + HGY L++GL +  YV  +L+ MY +
Sbjct: 117  KTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSR 176

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--- 636
               ++ A  V+  +   ++ ++N +I+G    G    A ++L++M +E I  D V++   
Sbjct: 177  RSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTA 236

Query: 637  --------------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGI 664
                                            ++++  Y   G    A  + + ++    
Sbjct: 237  FGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTK-- 294

Query: 665  YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
              NVV+WT++++   QN  + E+L FF +M+ + + PN  T + LL +C G+  L +GK 
Sbjct: 295  --NVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKL 352

Query: 725  IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            +H    K+GF     V   LI+MYSKSG++++A +VF +   +   +W+ MI G + +G 
Sbjct: 353  LHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGL 412

Query: 785  GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
            G+EA+++F E+L     P  +TF  +L+AC + G V+EG+ Y + +     I P +EHY+
Sbjct: 413  GREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYT 472

Query: 845  CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC 904
            C+V LL KAG LDEA +F+++ P K D   W  LL +C +H +    +  +  + +++P 
Sbjct: 473  CIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPG 532

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            +   Y L+ N+ A + RW+ V ++R  M E  VK     SWI+I   +HVF +EG  HP 
Sbjct: 533  DVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPE 592

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
            + +IY ++  L++ ++ +GYVPD   V+ D+++E+K + +  H+EKLAI YGLMKT S A
Sbjct: 593  SNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGA 652

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            PIRVIKN R+C DCH+A K +S V  R I +RD  RFH F +G CSC D W
Sbjct: 653  PIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 219/532 (41%), Gaps = 83/532 (15%)

Query: 300 ILKLCTKLMAFWLGVEVHASLI--KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           +LK+         G  +HA LI   +    ++    +L+N Y KC  +  A  LF  +  
Sbjct: 31  LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             + + W  ++     N      ++LF+ M      +        ++ +C+  G   EG 
Sbjct: 91  -RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW 149

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q HGY LKS L  +  V N LI MYSR + ++ A  V+  +   ++ S+N +I+     G
Sbjct: 150 QCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENG 209

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
           Y   A  + ++M    I  D +T+                      + + G         
Sbjct: 210 YPSEALEVLDRMVDECIVWDNVTY----------------------VTAFGL-------- 239

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
                 + L+ L+ G + H  + R G +YD +V ++++DMY K   + NA++VF+ ++ +
Sbjct: 240 -----CSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTK 294

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------------------------ 632
           N+V+W ++++ Y   G F  A     +ME + + P+                        
Sbjct: 295 NVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLH 354

Query: 633 -----------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                      ++  N+L++ YS  G  + A  +   M    I  + +TW+++I G   +
Sbjct: 355 TRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEM----ICRDSITWSAMICGLSHH 410

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYV 740
              RE+L  F +M      P+  T   +L  C  LG +Q G   ++ L  + G       
Sbjct: 411 GLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEH 470

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAI---YGNGKEA 788
            T ++ +  K+G L  A    + +  K  + +W  ++    +   YG GK+ 
Sbjct: 471 YTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKV 522



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 2/259 (0%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G   E LEV   +  + +++ +        LC+ L    LG++VH  + + G ++D  + 
Sbjct: 209 GYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVS 268

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            A+++ YGKC ++ +A K+F+ +   ++ + W  I+    +N  +E A+  F EM+    
Sbjct: 269 SAIIDMYGKCGNILNARKVFNRLQT-KNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGL 327

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                T   +L +CA + A   GK +H  + KS  E ++ V N LI+MYS++  +E A +
Sbjct: 328 LPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHK 387

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VF  M   +  +W++MI   +  G    A  +F +M +++  P  +T+  +LS     GS
Sbjct: 388 VFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGS 447

Query: 513 YQNVLTLLRG-MQSLGFRP 530
            Q     L   M+  G  P
Sbjct: 448 VQEGFYYLNQLMKQTGIEP 466



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 130/301 (43%), Gaps = 38/301 (12%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H +M + G  ++S  +  ++I  Y + G+  +A K F    +++   W++ L  Y S  G
Sbjct: 253 HCRMFRTGAEYDSF-VSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAY-SQNG 310

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
             +E L  + E+   G++       ++L  C  + A   G  +H  + K GF+  + +  
Sbjct: 311 CFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGN 370

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL+N Y K   +E+A+K+F E+    D + W+ +I     +     A+ +F+EM  +   
Sbjct: 371 ALINMYSKSGSIEAAHKVFLEMI-CRDSITWSAMICGLSHHGLGREALVVFQEMLAAKEC 429

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNNKLELATR 452
               T V +L ACA +G+  EG      ++K + +E  +    C++ +  +  +L+ A  
Sbjct: 430 PHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAE- 488

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
                                            N M S+ ++ D++ W  LLS    H +
Sbjct: 489 ---------------------------------NFMKSTPVKWDVVAWRTLLSACHVHQN 515

Query: 513 Y 513
           Y
Sbjct: 516 Y 516


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
            [Cucumis sativus]
          Length = 638

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/578 (35%), Positives = 326/578 (56%), Gaps = 39/578 (6%)

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            S V  +L+   + +LL  G+  H  IL  GL  DL     L++MY K   +  A++VFD 
Sbjct: 65   SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------------------------- 627
            M +R++V+WN++I      G    A  +L QM+ E                         
Sbjct: 125  MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184

Query: 628  ----------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                       +  ++    +L+  Y+  G  K+A+ +   M +     +VVTW+S+ +G
Sbjct: 185  QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDR----SVVTWSSMAAG 240

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             +QNE Y ++L  F +  +  +K +   MSS++  C GL  +  GK+++ L  K+GF  +
Sbjct: 241  YVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSN 300

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             +VA+ LIDMY+K G ++ + +VFR    + +  WN MI G + +    E ++LF ++ +
Sbjct: 301  IFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQ 360

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G  P+ +TF ++L+AC + GLV++G KYFD M+ ++++ P + HYSCMVD L +AG + 
Sbjct: 361  MGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIF 420

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA+D I  +PF   A++WG+LL SCR HG+LE AE+A+++LF +EP NS NY L+ N+ A
Sbjct: 421  EAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYA 480

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             + +W++V ++R  + E  VK     SWI+I   VH+F      HP   EIY +L  ++ 
Sbjct: 481  ANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMD 540

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            E++KLGY  +T+     + E  K ++L  H+EKLA   GL+     APIR++KN R+C D
Sbjct: 541  ELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGD 600

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH+  K  S    R++ +RD  RFHHF+ G CSC D W
Sbjct: 601  CHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 187/417 (44%), Gaps = 68/417 (16%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           ++L+ CAK     +GK  H  +L   L+++L   N LI+MYS+   ++ A +VFD M   
Sbjct: 69  EILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR 128

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           +L SWN+MI S T                                    +G     L LL
Sbjct: 129 SLVSWNTMIGSLT-----------------------------------QNGEENEALDLL 153

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             MQ  G   +  ++S VL A      L   +  H + ++  +D +++V T+L+D+Y K 
Sbjct: 154 LQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKC 213

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             +++A  VF++M +R++V W+S+ +GY    ++  A  +  +  E  +K D    +S++
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273

Query: 641 SGYS-----IWGQSKEAL---------------VIIHHMKNSGIYP-----------NVV 669
              +     I G+   AL               +I  + K  GI             NVV
Sbjct: 274 CACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVV 333

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            W ++ISG  ++    E +  F +MQQ  + PN  T  S+L  CG +GL++ G++   L 
Sbjct: 334 LWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLM 393

Query: 730 LKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGN 784
            K   +  + +  + ++D  S++G +  A ++  K   N + + W  ++     +GN
Sbjct: 394 TKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGN 450



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 174/377 (46%), Gaps = 37/377 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ILKLC K      G   HA ++  G   D+     L+N Y KC  V+ A ++F E+    
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPS-R 128

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
             + WN +I    +N +   A+ L  +MQ         TI  +L ACA   A  E + +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            + +K+A++ N+ V   L+ +Y++   ++ A  VF+SM D +                  
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRS------------------ 230

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            ++TW+ + +G+  +  Y+  L L R     G + +   +S V+
Sbjct: 231 -----------------VVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A   L  +  G++ +  + ++G   +++V +SL+DMY K   ++ + +VF +++ RN+V
Sbjct: 274 CACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVV 333

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
            WN++ISG       +    +  +M++  + P+ V++ S++S     G  K+       M
Sbjct: 334 LWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLM 393

Query: 660 -KNSGIYPNVVTWTSLI 675
            K   + PNV  ++ ++
Sbjct: 394 TKEHHLAPNVFHYSCMV 410



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 9/301 (2%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKS--LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           K+ HAQ++ MG      D++ S  LI  Y + G    A + F    SRS   W++ +   
Sbjct: 84  KACHAQILLMGL---KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSL 140

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
               GE  E L++  ++  +G  F    ++ +L  C    A      +HA  IK   D +
Sbjct: 141 TQ-NGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLN 199

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V +  AL++ Y KC  ++ A  +F  + D    + W+ +    ++NE +E A+ LFR+  
Sbjct: 200 VFVATALLDVYAKCGLMKDAVCVFESMPD-RSVVTWSSMAAGYVQNEMYEQALALFRKAW 258

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            +  K     +  ++ ACA + A  EGKQ++  + KS   SN+ V + LI MY++   +E
Sbjct: 259 ETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIE 318

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS--G 506
            + +VF  ++  N+  WN+MIS  +          LF KM    + P+ +T+  +LS  G
Sbjct: 319 ESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACG 378

Query: 507 H 507
           H
Sbjct: 379 H 379



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 702 NSTTMS---SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           N+T +S    +L+ C    LL  GK  H   L  G   D   +  LI+MYSK G++  AR
Sbjct: 60  NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFAR 119

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
           +VF +  +++L SWN MI      G   EA+ L  ++   G      T +++L AC    
Sbjct: 120 QVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKC 179

Query: 819 LVEEGW---KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + E      +    + D N+       + ++D+  K G + +A     +MP +   T W
Sbjct: 180 ALSECQLLHAFAIKAAMDLNVFVA----TALLDVYAKCGLMKDAVCVFESMPDRSVVT-W 234

Query: 876 GAL 878
            ++
Sbjct: 235 SSM 237



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 5/277 (1%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           LS  +  HA  IK     N   +  +L+  Y + G    A   F     RS   WSS   
Sbjct: 181 LSECQLLHAFAIKAAMDLNVF-VATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAA 239

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y       ++ L ++ +    G+     +++ ++  C  L A   G +V+A L K GF 
Sbjct: 240 GYVQ-NEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFC 298

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            ++ +  +L++ Y KC  +E + K+F +V    + +LWN +I    R+ +    + LF +
Sbjct: 299 SNIFVASSLIDMYAKCGGIEESYKVFRDVEK-RNVVLWNAMISGLSRHARSLEVMILFEK 357

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNN 445
           MQ         T V +L AC  +G   +G++    + K   L  N+   +C++   SR  
Sbjct: 358 MQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAG 417

Query: 446 KLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
           ++  A  +   +  + + S W S+++S    G +++A
Sbjct: 418 QIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/616 (34%), Positives = 342/616 (55%), Gaps = 41/616 (6%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            P   T N ++ G      +Q  L   + M   G  P+  +   + ++    R    G++ 
Sbjct: 51   PTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQI 107

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H +  + G   D Y   +LM+MY    CL +A++VFD M+++ +V+W ++I  +      
Sbjct: 108  HCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQP 167

Query: 615  VNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVI--IHH------------- 658
              A ++ ++M + E +KP+ V+   LV+  +   ++++  ++  IH              
Sbjct: 168  NEAVRLFDRMMKSENVKPNEVT---LVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVL 224

Query: 659  -------------------MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
                               + +     N+ +W  +I+G +++ NY E+L  F +MQ + I
Sbjct: 225  NTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGI 284

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            K +  TM+SLL  C  LG L+ GK +H    K     D  + T L+DMY+K G++++A +
Sbjct: 285  KGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQ 344

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF +   K + +W  +I+G A+ G  + A+  F E+   G +PDAITF  +LAAC ++G 
Sbjct: 345  VFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGF 404

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            V+EG  +F+SMS  Y I PTIEHY  +VD+LG+AG + EA + I++MP  PD  + G LL
Sbjct: 405  VDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLL 464

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
            G+CRIHG+LE AE A+++L +++P +S  Y L+ N+   S +WE+ +R R  M E G++ 
Sbjct: 465  GACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRK 524

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
                S I++  +VH F    + H  + EI   L  ++S++K  GYVPD   V  D+ EEE
Sbjct: 525  PPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEE 584

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K   L  H+EKLAI +GL+ T    PIRV+KN R+CSDCH+A K +S +  REI +RD  
Sbjct: 585  KETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRN 644

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF++G CSC   W
Sbjct: 645  RFHHFKDGTCSCRGFW 660



 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 227/509 (44%), Gaps = 44/509 (8%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           +S +K  HAQM++ G  ++     K + F  L+       A+  F       +   + + 
Sbjct: 1   MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
              +     QE L  + E+  +G+I        + K C        G ++H    K GF 
Sbjct: 61  RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFA 117

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF-R 385
            D + +  LMN Y  C  + SA K+F ++ D +  + W  +I V  + ++   A++LF R
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMED-KTVVSWATMIGVHAQWDQPNEAVRLFDR 176

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            M+  + K    T+V +L ACA+       K+IH Y+ +     ++ +   L+ +Y +  
Sbjct: 177 MMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCG 236

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            ++LA  +FD  +                                   + ++ +WN +++
Sbjct: 237 CVQLARDLFDKAQ-----------------------------------EKNLFSWNIMIN 261

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
           GH    +Y+  L L R MQ+ G + +  +++ +L A T L  L+ G+  H YI +  +D 
Sbjct: 262 GHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDV 321

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           D+ +GT+L+DMY K   ++ A +VF  M  ++++ W +LI G    G   NA +  ++M 
Sbjct: 322 DVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMH 381

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENY 684
            + +KPD +++  +++  S  G   E +   + M ++ GI P +  +  L+    +    
Sbjct: 382 IKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRI 441

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            E+ +    M    + P+   +  LL  C
Sbjct: 442 AEAEELIKSMP---MAPDQFVLGGLLGAC 467



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 197/486 (40%), Gaps = 80/486 (16%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYG--KCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           ++HA +++ G  FD      ++ F    +   ++ A  +FS++ +       N II    
Sbjct: 6   QIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPN-PTSYTCNSIIRGCT 64

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
                + A+  ++EM          T   + ++C       EGKQIH +  K    S+  
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDTY 121

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
             N L++MYS    L  A +VFD M+D  + SW +MI  +      + A  LF++M    
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM---- 177

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                                         M+S   +PN  ++  VL A    R L   +
Sbjct: 178 ------------------------------MKSENVKPNEVTLVNVLTACARARDLAMVK 207

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H YI  +G    + + T LMD+Y K  C+Q A+++FD  + +N+ +WN +I+G+    
Sbjct: 208 RIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDS 267

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNS---------------------------------- 638
            +  A  +  +M+ + IK D V+  S                                  
Sbjct: 268 NYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGT 327

Query: 639 -LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            LV  Y+  G  + A+ + H M       +V+TWT+LI G         +L++F +M  +
Sbjct: 328 ALVDMYAKCGSIETAIQVFHEMPEK----DVMTWTALILGLAMCGQAENALQYFDEMHIK 383

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            +KP++ T   +L  C   G +  G    + +    G         GL+D+  ++G +  
Sbjct: 384 GVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAE 443

Query: 757 AREVFR 762
           A E+ +
Sbjct: 444 AEELIK 449



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 169/375 (45%), Gaps = 41/375 (10%)

Query: 552 RESHGYILRNGLDYDLYVGTSLMDM--YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
           ++ H  +LR GL +D +  + ++      ++  LQ A+ VF  + N      NS+I G  
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSW--------------------------------N 637
            K L   A     +M  + + PD  ++                                N
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIHCHSTKLGFASDTYAQN 124

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM-QQ 696
           +L++ YS  G    A  +   M++      VV+W ++I    Q +   E+++ F +M + 
Sbjct: 125 TLMNMYSNCGCLVSARKVFDKMEDK----TVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           E++KPN  T+ ++L  C     L   K IH    ++GF +   + T L+D+Y K G ++ 
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQL 240

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           AR++F K+  K L SWN MI G     N +EA+LLF E+   G + D +T  +LL AC +
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300

Query: 817 SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            G +E G K+  +      I   +   + +VD+  K G ++ A      MP K D   W 
Sbjct: 301 LGALELG-KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK-DVMTWT 358

Query: 877 ALLGSCRIHGHLEYA 891
           AL+    + G  E A
Sbjct: 359 ALILGLAMCGQAENA 373



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 155/352 (44%), Gaps = 6/352 (1%)

Query: 158 NRHSHKPNSITNSPTSLALPPTDTLAKQAQL--SCISSGFCFLNETNKFRCLSSVKSKHA 215
           N  S+  NSI    T   L     L  Q  +    I   + F +     R  S  K  H 
Sbjct: 50  NPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIHC 109

Query: 216 QMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
              K+G  + SD   + +L+  Y   G   SA K F     ++   W++ +  +  +   
Sbjct: 110 HSTKLG--FASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQP 167

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            + +      +  + V      L  +L  C +     +   +H  + + GF   V L   
Sbjct: 168 NEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTV 227

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           LM+ Y KC  V+ A  LF +  + ++   WN +I   + +  +E A+ LFREMQ    K 
Sbjct: 228 LMDVYCKCGCVQLARDLFDKAQE-KNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKG 286

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T+  +L AC  +GA   GK +H Y+ K  ++ ++++   L+ MY++   +E A +VF
Sbjct: 287 DKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVF 346

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             M + ++ +W ++I      G  + A   F++M+   ++PD IT+  +L+ 
Sbjct: 347 HEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAA 398


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/590 (36%), Positives = 324/590 (54%), Gaps = 41/590 (6%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M  LG          +L      R ++ G+  H ++++      +Y+ T L+ +Y K DC
Sbjct: 81   MAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDC 140

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------ 636
            L +A+E+FD M  +N+V+W ++IS Y  +G    A  +  +M   + +P+  ++      
Sbjct: 141  LGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTS 200

Query: 637  -----------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                         +SL+  Y+  G+  +A  + H +       +
Sbjct: 201  CYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER----D 256

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            VV  T++ISG  Q     E+LK F Q+Q E +  NS T +S+L    GL  L +GK++H 
Sbjct: 257  VVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHS 316

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              L++G      +   LIDMYSK GN+  AR +F     +T  SWN M++G++ +G  +E
Sbjct: 317  HVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMARE 376

Query: 788  AILLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN-IIPTIEHYSC 845
             + LF  + E    +PD+IT+ A+L+ C +  L + G + F +M    + I P I HY C
Sbjct: 377  VLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGC 436

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            +VDLLG+AG ++EA+DFI+ MPF P A IWG+LLGSCR+H  +E   I  ++L +LEP N
Sbjct: 437  VVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPEN 496

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            + NY ++ NL A + +WED+  +R  M E  V      SW+++DQIVH F A    HP  
Sbjct: 497  AGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRR 556

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
             E+  ++  L  + K+ GYVPD  CV  D+DEE+K KVLL H+EKLA+ +GL+ T     
Sbjct: 557  EEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTT 616

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IRVIKN R+C DCH+ AK++S +  R + LRD  RFH+   G CSC D W
Sbjct: 617  IRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 189/417 (45%), Gaps = 42/417 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL  C    A   G  VH  +IK  +   V+L+  L+  Y KC  +  A ++F E+   +
Sbjct: 96  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQ-K 154

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +I    +      A+ LF EM  S  +    T   +L +C     F  G+QIH
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 214

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              +K   ES++ V + L+ MY+++ ++  A  VF  + + ++ +  ++IS Y  +G  +
Sbjct: 215 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 274

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  LF                                   R +Q  G   N  + + VL
Sbjct: 275 EALKLF-----------------------------------RQLQIEGMNSNSVTYASVL 299

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A++ L  L +G++ H ++LR+G    + +  SL+DMY K   +  A+ +FD+M  R  +
Sbjct: 300 TALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCI 359

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           +WN+++ GY   G+     ++   M EE ++KPD +++ +++SG S        L I ++
Sbjct: 360 SWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYN 419

Query: 659 MKN--SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           M N   GI P++  +  ++    +     E+  F  +M      P +    SLL +C
Sbjct: 420 MVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMP---FVPTAAIWGSLLGSC 473



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 204/450 (45%), Gaps = 77/450 (17%)

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           L RE++F     I       L  C    A  EG+++H +++K+    ++ +   LI +Y+
Sbjct: 84  LGREVKFEGYDTI-------LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYN 136

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           + + L  A  +FD M   N+ SW +MIS+Y+  G+   A +LF +M  S  +P+      
Sbjct: 137 KCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPN------ 190

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
               HFT   +  +LT   G  SLGF                    + GR+ H   ++  
Sbjct: 191 ----HFT---FATILTSCYG--SLGF--------------------ETGRQIHSIAIKRN 221

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            +  ++VG+SL+DMY K+  + +A  VF  +  R++VA  ++ISGY   GL   A K+  
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV------------- 669
           Q++ E +  + V++ S+++  S          +  H+  SG Y  VV             
Sbjct: 282 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 341

Query: 670 ------------------TWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLL 710
                             +W +++ G  ++   RE L+ F  M++E+ +KP+S T  ++L
Sbjct: 342 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 401

Query: 711 QTCGGLGLLQNGKEI--HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NK 767
             C    L   G EI  + +  K+G   D      ++D+  ++G ++ A +  +K     
Sbjct: 402 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 461

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           T A W  ++    ++ + +  I++  +LLE
Sbjct: 462 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLE 491



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 149/321 (46%), Gaps = 5/321 (1%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            LNE    R +   +  H  MIK   +  S  +   LI  Y +      A + F     +
Sbjct: 96  ILNECVSQRAIREGQRVHTHMIKTCYL-PSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +   W++ +  Y   G    E L ++ E+              IL  C   + F  G ++
Sbjct: 155 NVVSWTAMISAYSQRGFAF-EALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQI 213

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H+  IKR ++  + +  +L++ Y K   +  A+ +F  + +  D +    II    +   
Sbjct: 214 HSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE-RDVVACTAIISGYAQMGL 272

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            E A+KLFR++Q     + S T   +L A + + A + GKQ+H +VL+S   S + + N 
Sbjct: 273 DEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNS 332

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQP 495
           LI MYS+   +  A R+FDSM +    SWN+M+  Y+  G       LF  M   ++++P
Sbjct: 333 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 392

Query: 496 DIITWNCLLSGHFTHGSYQNV 516
           D IT+  +LSG  +HG  +++
Sbjct: 393 DSITYLAVLSG-CSHGQLEDM 412


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 243/814 (29%), Positives = 417/814 (51%), Gaps = 73/814 (8%)

Query: 217  MIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQ 276
            M K+G + +    V ++I   +  G    A   F    + +   W+  +  +   G ++ 
Sbjct: 274  MQKLGLVPDQVAFV-TVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDI- 331

Query: 277  ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALM 336
            E ++ +  +   GV      L  +L     L A   G+ VHA  IK+G + +V++  +L+
Sbjct: 332  EAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLI 391

Query: 337  NFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS 396
            N Y KC  +E+A K+F  + D  + +LWN ++    +N      +KLF EM+        
Sbjct: 392  NMYAKCEKMEAAKKVFDAL-DERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDE 450

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
             T   +L ACA +     G+Q+H +++K   E NL V N L+ MY++   LE A + F+ 
Sbjct: 451  FTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEF 510

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            +++                                    D ++WN ++ G+         
Sbjct: 511  IRNR-----------------------------------DNVSWNAIIVGYVQEEDEDEA 535

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
              + R M   G  P+  S++ +L     L+ L+ G + H +++++GL   LY G+SL+DM
Sbjct: 536  FNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDM 595

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
            YVK   ++ A+ VF  M +R++V+ N++I+GY    L V A  +  +M+ E + P  +++
Sbjct: 596  YVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITF 654

Query: 637  NSLVSG----YSI-WGQSKEALV----------------IIHHMK-----NSGI------ 664
             SL+      Y +  G+    L+                ++ +M      ++ I      
Sbjct: 655  ASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQ 714

Query: 665  YP-NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
            YP + + WT++ISG  QN    E+L+ + +M + + +P+  T +S+L+ C  L  L +G+
Sbjct: 715  YPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGR 774

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT-LASWNCMIMGFAIY 782
             IH L    G   D    + ++DMY+K G++KS+ +VF +  +K  + SWN MI+GFA  
Sbjct: 775  MIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKN 834

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G  + A+ +F E+  T  +PD +TF  +L AC ++G V EG + FD M   Y I+P ++H
Sbjct: 835  GYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDH 894

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
             +CM+DLLG+ G+L EA +FI  + F+P+A IW  LLG+CRIHG       A+ +L +LE
Sbjct: 895  CACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELE 954

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P NS+ Y L+ N+ A S  W++V  +R +M E G++ +   SWI + Q  ++F A    H
Sbjct: 955  PENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFH 1014

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            P+ GEI+  L  L++ MK+ GY+ +T  + +D D
Sbjct: 1015 PSAGEIHALLKDLIALMKEDGYIAETDSLLEDED 1048



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 209/837 (24%), Positives = 364/837 (43%), Gaps = 101/837 (12%)

Query: 146 YHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAK-QAQLSCISSGFCF------- 197
           ++H  TR S    RH   P +  +   SL+       +  Q Q++  S    F       
Sbjct: 14  FNHSGTRLSHESMRHGRAPFTTLHRSNSLSFHHQSNFSTIQRQVNQTSEHKIFTHLLKIC 73

Query: 198 ------------LNETNKFRCLSSVKSK--HAQMIKMGKIWNSDDMVKSLIFH-YLEFGD 242
                        +ET +    +S  SK  HAQ +K G  + S   + S I   Y + G+
Sbjct: 74  LQQCQRIKIRHPFDETPQRLAQASRTSKTIHAQTLKFG--FGSKGRLGSAIVDLYAKCGN 131

Query: 243 FTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILK 302
              AAKAF     R    W+S L  Y S  G +++++  +G L   GV        I+L 
Sbjct: 132 VEFAAKAFNQLEKRDILAWNSVLSMY-SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLS 190

Query: 303 LCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
            C +L+   LG +VH  +IK GF+F+   + +L++ Y KC  +  A K+F  V D  D +
Sbjct: 191 SCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVD-PDTV 249

Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG------- 415
            W  +I   ++    E A+K+F +MQ           V ++ AC  +G   +        
Sbjct: 250 SWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQM 309

Query: 416 ---------KQIHGYV-------------------LKSALESNLSVCNCLISMYSRNNKL 447
                      I G+V                   +KS   +  SV + + S+ + N  L
Sbjct: 310 PNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGL 369

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            +  +      + N+   +S+I+ Y     ++ A  +F+ ++    + +++ WN +L G+
Sbjct: 370 LVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD----ERNLVLWNAMLGGY 425

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
             +G    V+ L   M+  GF P+  + + +L A   L  L+ GR+ H +I+++  +Y+L
Sbjct: 426 AQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNL 485

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           +V  +L+DMY K   L+ A++ F+ ++NR+ V+WN++I GY  +     A  M  +M  +
Sbjct: 486 FVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILD 545

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP--------------------- 666
            I PD VS  S++SG +     ++   +   +  SG+                       
Sbjct: 546 GIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAA 605

Query: 667 ----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
                     +VV+  ++I+G  QN+   E++  F +MQ E + P+  T +SLL  C G 
Sbjct: 606 RYVFSCMPSRSVVSMNAIIAGYAQND-LVEAIDLFQEMQNEGLNPSEITFASLLDACTGP 664

Query: 717 GLLQNGKEIHCLCLKNGFIKDA-YVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNC 774
             L  G++IHCL  K G + D  ++   L+ MY  S     A  +F +    K+   W  
Sbjct: 665 YKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTA 724

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
           +I G    G  +EA+ L+ E+     +PD  TF ++L AC     + +G +   S+    
Sbjct: 725 IISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDG-RMIHSLIFHV 783

Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            +       S +VD+  K G +  +      M  K D   W +++     +G+ E A
Sbjct: 784 GLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENA 840



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 167/374 (44%), Gaps = 62/374 (16%)

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
           A K  NQ+E    K D+++WNS++S YS  G  ++                 V W     
Sbjct: 135 AAKAFNQLE----KRDILAWNSVLSMYSRQGSLEQ-----------------VIWCF--- 170

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
           GSLQN                 + PN  T + +L +C  L  +  GK++HC  +K GF  
Sbjct: 171 GSLQNCG---------------VSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEF 215

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
           +++    LIDMYSK G+L  AR++F    +    SW  MI G+   G  +EA+ +F ++ 
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 797 ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
           + G  PD + F  ++ AC   G +++    F  M  + N++     ++ M+    K G  
Sbjct: 276 KLGLVPDQVAFVTVITACVGLGRLDDACDLFVQM-PNTNVVA----WNVMISGHVKRGCD 330

Query: 857 DEAWDFIRTM---PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            EA DF + M     K   +  G++L +      L Y  +   +  K +  NS N  +  
Sbjct: 331 IEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIK-QGLNS-NVYVGS 388

Query: 914 NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
           +L+ M  + E +E  +   D +  +++++W     + ++  ++  G           ++ 
Sbjct: 389 SLINMYAKCEKMEAAKKVFDALDERNLVLW-----NAMLGGYAQNGYAS--------KVM 435

Query: 974 HLVSEMKKLGYVPD 987
            L SEM+  G+ PD
Sbjct: 436 KLFSEMRGCGFWPD 449


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 240/770 (31%), Positives = 382/770 (49%), Gaps = 88/770 (11%)

Query: 315  EVHASLIKRGFDFD------VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
            EVHA +++ G  FD      +    AL +F      ++ A  LF ++    +   WN +I
Sbjct: 43   EVHARMLRTGLFFDPFSASKLFTASALSSF----STLDYARNLFDQIPQ-PNLYTWNTLI 97

Query: 369  MVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
                 +     +  +F ++        ++ T   +++A +++ A   G  +HG  +K + 
Sbjct: 98   RAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSF 157

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
              +L + N L+  Y     L +A R                               LF  
Sbjct: 158  GMDLYILNSLVRFYGACGDLSMAER-------------------------------LFKG 186

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            ++      D+++WN ++S        ++ L L   M+     PN  ++  VL A  +   
Sbjct: 187  ISCK----DVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLD 242

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L++GR    YI R G+  DL +  +++DMY K   + +AQ++FD                
Sbjct: 243  LEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFD---------------- 286

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                           +M E     D+ SW  ++ GY+  G    A ++ + M        
Sbjct: 287  ---------------EMPER----DVFSWTIMLDGYAKMGDYDAARLVFNAMP----VKE 323

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDI-KPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            +  W  LIS   QN   +E+L  F ++Q   I KP+  T+ S L  C  LG +  G  IH
Sbjct: 324  IAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIH 383

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
                + G + + ++ + L+DMY+K G+L+ A EVF     + +  W+ MI G  ++G GK
Sbjct: 384  VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGK 443

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
             AI LF E+ E   +P+++TFT +L AC ++GLV+EG  +F  M   Y ++P ++HY+CM
Sbjct: 444  AAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACM 503

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VD+LG+AG+L+EA + I  M   P A++WGALLG+C +H ++E  E+AS +L KLEP N 
Sbjct: 504  VDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNH 563

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
                L+ N+ A + RWE V  LR  M +  +K     S I+ +  VH F      HP + 
Sbjct: 564  GAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSS 623

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE-KGKVLLSHTEKLAIVYGLMKTKSRAP 1025
             IY +L  + +++K +GY P+   + Q I+E++ K + L  H+EKLAI +GL+      P
Sbjct: 624  NIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQP 683

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IRV+KN R+C DCH  AK +S V  R+I LRD  RFHHFR+G CSC D W
Sbjct: 684  IRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 251/516 (48%), Gaps = 17/516 (3%)

Query: 205 RCLSS--VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD-- 260
           +C SS  +K  HA+M++ G  +  D    S +F       F++   A  L+      +  
Sbjct: 34  KCSSSKQLKEVHARMLRTGLFF--DPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLY 91

Query: 261 -WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHAS 319
            W++ +  Y S     Q  +     L     +        ++K  ++L A  +G  VH  
Sbjct: 92  TWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGM 151

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            IK  F  D+++  +L+ FYG C D+  A +LF  +S  +D + WN +I    +    E+
Sbjct: 152 AIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGIS-CKDVVSWNSMISAFAQGNCPED 210

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A++LF +M+  +    S T+V +L ACAK      G+ +  Y+ +  ++ +L++CN ++ 
Sbjct: 211 ALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLD 270

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY++   ++ A ++FD M + ++ SW  M+  Y  +G  D A  +FN M       +I  
Sbjct: 271 MYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVK----EIAA 326

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
           WN L+S +  +G  +  L +   +Q S   +P+  ++   L A  +L  +  G   H YI
Sbjct: 327 WNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYI 386

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            R G+  + ++ +SL+DMY K   L+ A EVF +++ R++  W+++I+G    G    A 
Sbjct: 387 KREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAI 446

Query: 619 KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISG 677
            +  +M+E ++KP+ V++ +++   S  G   E  V  H M+   G+ P +  +  ++  
Sbjct: 447 DLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDI 506

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +     E+++   +M      P+++   +LL  C
Sbjct: 507 LGRAGFLEEAMELINEMST---TPSASVWGALLGAC 539


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/583 (34%), Positives = 326/583 (55%), Gaps = 37/583 (6%)

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
            P   +  +++ +      L    + H  ++  G D D ++ T L++M+ + D + NA++V
Sbjct: 67   PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKV 126

Query: 590  FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG------- 642
            FD  + R I  WN+L       G   +  ++  +M    +  D  ++  L+         
Sbjct: 127  FDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECL 186

Query: 643  YSIWGQSKEALV-IIHHMKNSGIY---------------------------PNVVTWTSL 674
             S   + KE    I+ H   + ++                            NVV+W+++
Sbjct: 187  VSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAM 246

Query: 675  ISGSLQNENYRESLKFFIQM--QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            I+   +N    E+L+ F +M     D  PNS TM S+LQ C     L+ GK IH   L+ 
Sbjct: 247  IACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRR 306

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G      V + LI MY++ G L+S + +F +   K +  WN +I  + ++G G++AI +F
Sbjct: 307  GLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIF 366

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             E+++ GF P  I+F ++L AC ++GLVEEG K F+SM  ++ I P++EHY+CMVDLLG+
Sbjct: 367  EEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGR 426

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            A  LDEA   I  +  +P   +WG+LLG+CRIH H+E AE AS+RLFKLEP N+ NY L+
Sbjct: 427  ANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLL 486

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             ++ A +  W++V+R++  +D   ++ V   SWI++ + ++ F++    +P   +++  L
Sbjct: 487  ADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALL 546

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
             +L +EMK+ GY P T+ V  D+D+EEK +++L H+EKLA+ +GL+ T     IR+ KN 
Sbjct: 547  VNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNL 606

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH+  K++S    REI +RD  RFHHF++G CSC D W
Sbjct: 607  RLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 52/420 (12%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            ++VH  L+  GFD D  L   L+N + +   V++A K+F +        +WN +     
Sbjct: 88  ALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRK-RTIYVWNALFRALA 146

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK----VGAFHEGKQIHGYVLKSALE 428
              +  + ++L+  M      +   T   +L+AC      V    +GK+IH ++L+    
Sbjct: 147 LAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYG 206

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           +++ V   L+ MY+R   +  A+ VFD M   N+ SW++MI+ Y   G    A  LF +M
Sbjct: 207 AHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREM 266

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                         +L+   TH S  N +T++                 VLQA      L
Sbjct: 267 --------------MLN---THDSVPNSVTMVS----------------VLQACAAFAAL 293

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
           + G+  H YILR GLD  L V ++L+ MY +   L++ Q +FD M  +++V WNSLIS Y
Sbjct: 294 EQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSY 353

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPN 667
              G    A K+  +M +    P  +S+ S++   S  G  +E   +   M K  GI P+
Sbjct: 354 GLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPS 413

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
           V  +  ++    +     E+ K    ++   I+P      SLL  C           IHC
Sbjct: 414 VEHYACMVDLLGRANRLDEAAKIIEDLR---IEPGPKVWGSLLGAC----------RIHC 460



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 146/284 (51%), Gaps = 8/284 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +   LI  + E     +A K F     R+   W++      +  G   ++LE++  ++  
Sbjct: 106 LATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRAL-ALAGRGNDVLELYPRMNMM 164

Query: 289 GVIFRSRILTIILKLCTK---LMAFWL-GVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           GV       T +LK C     L++F   G E+HA +++ G+   VH+   LM+ Y +   
Sbjct: 165 GVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGC 224

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI--SRTIVKM 402
           V  A+ +F E+  +++ + W+ +I    +N K   A++LFREM  ++  ++  S T+V +
Sbjct: 225 VSYASAVFDEMP-VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSV 283

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           LQACA   A  +GK IH Y+L+  L+S L V + LI+MY+R  KLE    +FD M   ++
Sbjct: 284 LQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDV 343

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             WNS+ISSY   GY   A  +F +M      P  I++  +L  
Sbjct: 344 VLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGA 387



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/394 (20%), Positives = 164/394 (41%), Gaps = 65/394 (16%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           ++ + A+  +  +   +H  ++    + +  +   LI+M+S  + ++ A +VFD  +   
Sbjct: 75  LILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRT 134

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           +  WN++  +    G  +    L+ +MN   +  D  T+  LL                 
Sbjct: 135 IYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKA--------------- 179

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
                            + +   +  L+ G+E H +ILR+G    ++V T+LMDMY +  
Sbjct: 180 ----------------CVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFG 223

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEIKPDLVSWNSL 639
           C+  A  VFD M  +N+V+W+++I+ Y   G    A ++  +M     +  P+ V+  S+
Sbjct: 224 CVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSV 283

Query: 640 VSGYSIWGQSKEALVIIHHMKNSG---IYP----------------------------NV 668
           +   + +   ++  +I  ++   G   I P                            +V
Sbjct: 284 LQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDV 343

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HC 727
           V W SLIS    +   R+++K F +M      P+  +  S+L  C   GL++ GK++   
Sbjct: 344 VLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFES 403

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +  ++G          ++D+  ++  L  A ++ 
Sbjct: 404 MVKEHGIQPSVEHYACMVDLLGRANRLDEAAKII 437



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 119/307 (38%), Gaps = 61/307 (19%)

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           +LK  + +   +  P   T   L+ +      L +  ++H L +  GF +D ++AT LI+
Sbjct: 53  NLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLIN 112

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
           M+S+   + +AR+VF K+  +T+  WN +    A+ G G + + L+  +   G   D  T
Sbjct: 113 MFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFT 172

Query: 807 FTALLAACKNS---------------------------------------GLVEEGWKYF 827
           +T LL AC  S                                       G V      F
Sbjct: 173 YTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVF 232

Query: 828 DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK-----PDATIWGALLGSC 882
           D M      +  +  +S M+    K G   EA +  R M        P++    ++L +C
Sbjct: 233 DEMP-----VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQAC 287

Query: 883 RI-----HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
                   G L +A I  R L  + P  SA       L+ M  R   +E  +   D +  
Sbjct: 288 AAFAALEQGKLIHAYILRRGLDSILPVISA-------LITMYARCGKLESGQLIFDRMHK 340

Query: 938 KSVLVWS 944
           K V++W+
Sbjct: 341 KDVVLWN 347



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 34/243 (13%)

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           LI    K GNLK A  +    +N T  +   +I+  A   +  +A+ +   L++ GF  D
Sbjct: 44  LIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQD 103

Query: 804 AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
               T L+        V+   K FD   T    I         + L G+   + E +  +
Sbjct: 104 PFLATKLINMFSELDTVDNARKVFD--KTRKRTIYVWNALFRALALAGRGNDVLELYPRM 161

Query: 864 RTMPFKPDATIWGALLGSC--------------RIHGHLEYAEIASRRLFKLEPCNSANY 909
             M    D   +  LL +C               IH H+            L     A+ 
Sbjct: 162 NMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHI------------LRHGYGAHV 209

Query: 910 NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
           ++M  L+ M  R+  V       DE+ VK+V+ WS      ++  ++  G P+ A  E++
Sbjct: 210 HVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWS-----AMIACYAKNGKPYEAL-ELF 263

Query: 970 FEL 972
            E+
Sbjct: 264 REM 266


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
            [Cucumis sativus]
          Length = 638

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/578 (35%), Positives = 325/578 (56%), Gaps = 39/578 (6%)

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            S V  +L+   + +LL  G+  H  IL  GL  DL     L++MY K   +  A++VFD 
Sbjct: 65   SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------------------------- 627
            M +R++V+WN++I      G    A  +L QM+ E                         
Sbjct: 125  MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184

Query: 628  ----------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                       +  ++    +L+  Y+  G  K+A+ +   M +     +VVTW+S+ +G
Sbjct: 185  QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDR----SVVTWSSMAAG 240

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             +QNE Y ++L  F +  +  +K +   MSS++  C GL  +  GK+++ L  K+GF  +
Sbjct: 241  YVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSN 300

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             +VA+ LIDMY+K G ++ + +VFR    + +  WN MI G + +    E ++LF ++ +
Sbjct: 301  IFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQ 360

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G  P+ +TF ++L+AC + GLV +G KYFD M+ ++++ P + HYSCMVD L +AG + 
Sbjct: 361  MGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIF 420

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA+D I  +PF   A++WG+LL SCR HG+LE AE+A+++LF +EP NS NY L+ N+ A
Sbjct: 421  EAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYA 480

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             + +W++V ++R  + E  VK     SWI+I   VH+F      HP   EIY +L  ++ 
Sbjct: 481  ANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMD 540

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            E++KLGY  +T+     + E  K ++L  H+EKLA   GL+     APIR++KN R+C D
Sbjct: 541  ELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGD 600

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH+  K  S    R++ +RD  RFHHF+ G CSC D W
Sbjct: 601  CHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 187/417 (44%), Gaps = 68/417 (16%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           ++L+ CAK     +GK  H  +L   L+++L   N LI+MYS+   ++ A +VFD M   
Sbjct: 69  EILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR 128

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           +L SWN+MI S T                                    +G     L LL
Sbjct: 129 SLVSWNTMIGSLT-----------------------------------QNGEENEALDLL 153

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             MQ  G   +  ++S VL A      L   +  H + ++  +D +++V T+L+D+Y K 
Sbjct: 154 LQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKC 213

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             +++A  VF++M +R++V W+S+ +GY    ++  A  +  +  E  +K D    +S++
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273

Query: 641 SGYS-----IWGQSKEAL---------------VIIHHMKNSGIYP-----------NVV 669
              +     I G+   AL               +I  + K  GI             NVV
Sbjct: 274 CACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVV 333

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            W ++ISG  ++    E +  F +MQQ  + PN  T  S+L  CG +GL++ G++   L 
Sbjct: 334 LWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLM 393

Query: 730 LKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGN 784
            K   +  + +  + ++D  S++G +  A ++  K   N + + W  ++     +GN
Sbjct: 394 TKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGN 450



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 181/419 (43%), Gaps = 72/419 (17%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ILKLC K      G   HA ++  G   D+     L+N Y KC  V+ A ++F E+    
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPS-R 128

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
             + WN +I    +N +   A+ L  +MQ         TI  +L ACA   A  E + +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            + +K+A++ N+ V   L+ +Y++   ++ A  VF+SM D +                  
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRS------------------ 230

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            ++TW+ + +G+  +  Y+  L L R     G + +   +S V+
Sbjct: 231 -----------------VVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A   L  +  G++ +  + ++G   +++V +SL+DMY K   ++ + +VF +++ RN+V
Sbjct: 274 CACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVV 333

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
            WN++IS                                   G S   +S E +++   M
Sbjct: 334 LWNAMIS-----------------------------------GLSRHARSLEVMILFEKM 358

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLG 717
           +  G+ PN VT+ S++S        R+  K+F  M +E  + PN    S ++ T    G
Sbjct: 359 QQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAG 417



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 9/301 (2%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKS--LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           K+ HAQ++ MG      D++ S  LI  Y + G    A + F    SRS   W++ +   
Sbjct: 84  KACHAQILLMGL---KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSL 140

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
               GE  E L++  ++  +G  F    ++ +L  C    A      +HA  IK   D +
Sbjct: 141 TQ-NGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLN 199

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           V +  AL++ Y KC  ++ A  +F  + D    + W+ +    ++NE +E A+ LFR+  
Sbjct: 200 VFVATALLDVYAKCGLMKDAVCVFESMPD-RSVVTWSSMAAGYVQNEMYEQALALFRKAW 258

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            +  K     +  ++ ACA + A  EGKQ++  + KS   SN+ V + LI MY++   +E
Sbjct: 259 ETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIE 318

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS--G 506
            + +VF  ++  N+  WN+MIS  +          LF KM    + P+ +T+  +LS  G
Sbjct: 319 ESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACG 378

Query: 507 H 507
           H
Sbjct: 379 H 379



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 702 NSTTMS---SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           N+T +S    +L+ C    LL  GK  H   L  G   D   +  LI+MYSK G++  AR
Sbjct: 60  NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFAR 119

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
           +VF +  +++L SWN MI      G   EA+ L  ++   G      T +++L AC    
Sbjct: 120 QVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKC 179

Query: 819 LVEEGW---KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + E      +    + D N+       + ++D+  K G + +A     +MP +   T W
Sbjct: 180 ALSECQLLHAFAIKAAMDLNVFVA----TALLDVYAKCGLMKDAVCVFESMPDRSVVT-W 234

Query: 876 GAL 878
            ++
Sbjct: 235 SSM 237



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 5/277 (1%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           LS  +  HA  IK     N   +  +L+  Y + G    A   F     RS   WSS   
Sbjct: 181 LSECQLLHAFAIKAAMDLNVF-VATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAA 239

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y       ++ L ++ +    G+     +++ ++  C  L A   G +++A L K GF 
Sbjct: 240 GYVQ-NEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFC 298

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            ++ +  +L++ Y KC  +E + K+F +V    + +LWN +I    R+ +    + LF +
Sbjct: 299 SNIFVASSLIDMYAKCGGIEESYKVFRDVEK-RNVVLWNAMISGLSRHARSLEVMILFEK 357

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNN 445
           MQ         T V +L AC  +G   +G++    + K   L  N+   +C++   SR  
Sbjct: 358 MQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAG 417

Query: 446 KLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
           ++  A  +   +  + + S W S+++S    G +++A
Sbjct: 418 QIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454


>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
          Length = 742

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/659 (33%), Positives = 348/659 (52%), Gaps = 43/659 (6%)

Query: 418  IHGYVLKSALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H   L++ L S    V N LI MY+     + A R FD +   +   W ++I      G
Sbjct: 126  LHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWG 185

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             +D A  L  +      + ++++W  L++G+   G   + +     M S G  P+  +V 
Sbjct: 186  LLDEARRLLVQAP----ERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVI 241

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
              L A ++L+ L  GR  H  + +  +     +  +L+DMY K   +  AQ VFD +   
Sbjct: 242  GALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRG 301

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
                                             KP+   WN+++ GY   G    A  + 
Sbjct: 302  Q--------------------------------KPE--PWNAIIDGYCKLGHVDVARSLF 327

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
              M       +V+T+ S+I+G + +   R++L+ F+QM++  ++ ++ T+ SLL  C  L
Sbjct: 328  DQMGAR----DVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASL 383

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
            G L +G+ +H    +    +D Y+ T L+DMY K G +  A  VF +   + + +W  MI
Sbjct: 384  GALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMI 443

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G A  G GK+A+  F ++   GFQP ++T+ A+L AC +S L++EG  +F+ M + + +
Sbjct: 444  AGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKL 503

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P +EHY CM+DLL ++G LDEA   ++TMP +P+A IWG++L +CR+H +++ A  A+ 
Sbjct: 504  HPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAE 563

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             L KL P   A Y  + N+   S +W D +R+R  M+E GVK    +S I +   VH F 
Sbjct: 564  HLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFV 623

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            A    HP T EI   +  +   +K +GY P T  +  D+DEEEK + LL+H+EK+AI +G
Sbjct: 624  ANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFG 683

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+      PI ++KN RVC DCH+A K +S +  REI +RD +RFHHFR+G CSCND W
Sbjct: 684  LISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 32/306 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I   + +G    A +       R+   W+S +  Y S  G   + +  +  +   GV 
Sbjct: 176 TVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGY-SRAGRPADAVYCFNCMLSDGVA 234

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +   L  C+KL    LG  +H  + ++      +L  AL++ Y KC D+  A  +
Sbjct: 235 PDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAV 294

Query: 352 FSEVSDLEDDLLWNEII-----------------------------MVK--LRNEKWENA 380
           F  V   +    WN II                             M+   + + +  +A
Sbjct: 295 FDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDA 354

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           ++LF +M+    +A + T+V +L ACA +GA   G+ +H  + +  +E ++ +   L+ M
Sbjct: 355 LQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDM 414

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y +  +++ AT VF  M + ++ +W +MI+     G    A   F +M     QP  +T+
Sbjct: 415 YMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTY 474

Query: 501 NCLLSG 506
             +L+ 
Sbjct: 475 IAVLTA 480



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 130/295 (44%), Gaps = 38/295 (12%)

Query: 222 KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD--WSSFLEDYESFG------- 272
           +I  +D++V +LI  Y + GD  + A+A F    R      W++ ++ Y   G       
Sbjct: 267 RIRMTDNLVVALIDMYAKCGDI-AQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARS 325

Query: 273 -----------------------GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
                                  G +++ L+++ ++   G+   +  +  +L  C  L A
Sbjct: 326 LFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGA 385

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
              G  +HAS+ +R  + DV+L  AL++ Y KC  V+ A  +F  + +  D   W  +I 
Sbjct: 386 LPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGE-RDVHTWTAMIA 444

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS--AL 427
               N   ++A++ F +M+    +  S T + +L AC+      EG+ +H   ++S   L
Sbjct: 445 GLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGR-LHFNEMRSLHKL 503

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
              +    C+I + +R+  L+ A  +  +M    N   W S++S+      +D+A
Sbjct: 504 HPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLA 558


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 238/781 (30%), Positives = 383/781 (49%), Gaps = 77/781 (9%)

Query: 327  FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            F + L  A+++   +  +   A K+F+++ +  D   WN ++    +    E A+ L+  
Sbjct: 127  FGLRLGNAMLSMLVRFGETWHAWKVFAKMPE-RDVFSWNVMVGGYGKAGFLEEALDLYHR 185

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
            M ++ A+    T   +L++C  V     G+++H +VL+  L   + V N L++MY++   
Sbjct: 186  MLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAK--- 242

Query: 447  LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
                                         G V+ A  +F+ M+ +    D I+WN +++G
Sbjct: 243  ----------------------------CGDVEAARKVFDGMSLT----DCISWNAMIAG 270

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            HF +   +  L L   M      PN  +++ V  A   L  L + +E H   ++ G   D
Sbjct: 271  HFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATD 330

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            +    SL+ MY     +  A  VF  M+ R+ ++W ++ISGY   G    A ++   ME 
Sbjct: 331  VAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEV 390

Query: 627  EEIKPD-----------------------------------LVSWNSLVSGYSIWGQSKE 651
              + PD                                   +V  N+LV  Y+     ++
Sbjct: 391  NNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEK 450

Query: 652  ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
            A+ +  +M +     +V++W+S+I+G   N    E+L +F  M   D+KPNS T  + L 
Sbjct: 451  AIEVFKYMPDK----DVISWSSMIAGFCFNHKNFEALYYFRHMLA-DVKPNSVTFIAALA 505

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
             C   G L+ GKEIH   L+ G   + YV   L+D+Y K G    A   F     K + S
Sbjct: 506  ACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVS 565

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            WN M+ GF  +G+G  A+  F+E+LETG  PD +TF ALL  C  +G+V +GW+ F SM+
Sbjct: 566  WNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMT 625

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
              Y+I+P ++HY+CMVDLL + G L E ++FI  MP  PDA +WGALL  CRIH ++E  
Sbjct: 626  EKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELG 685

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E+A++ + +LEP ++  + L+ +L A +  W +V ++R +M   G++     SW+++   
Sbjct: 686  ELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGA 745

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKL 1011
            +H F  +   HP   EI   L  +   MK  G+ P      +D  E  K  VL  H+E+L
Sbjct: 746  IHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLED-KEVSKDDVLCGHSERL 804

Query: 1012 AIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            A+ +GL+ T     I V KN   C  CH   + +S +  REI +RD   FHHFR+G CSC
Sbjct: 805  AVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRDTKEFHHFRDGSCSC 864

Query: 1072 N 1072
             
Sbjct: 865  G 865



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 144/608 (23%), Positives = 253/608 (41%), Gaps = 73/608 (12%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           + FG+   A K F     R    W+  +  Y    G ++E L+++  +   G        
Sbjct: 140 VRFGETWHAWKVFAKMPERDVFSWNVMVGGYGK-AGFLEEALDLYHRMLWAGARPDVYTF 198

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
             +L+ C  +    +G EVHA +++ G   +V +  AL+  Y KC DVE+A K+F  +S 
Sbjct: 199 PCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMS- 257

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
           L D + WN +I     N + E  ++LF  M     +    TI  +  A   +      K+
Sbjct: 258 LTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKE 317

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IH   +K    ++++ CN LI MYS   ++  A  VF  M+  +  SW +MIS Y   G+
Sbjct: 318 IHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGF 377

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            D A  ++  M  + + PD +T                                   V+ 
Sbjct: 378 PDKALEVYALMEVNNVSPDDVT-----------------------------------VAS 402

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            L A   L  L  G + H      G    + V  +L++MY K+  ++ A EVF  M +++
Sbjct: 403 ALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKD 462

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-----NSLVSGYSIWGQSKEA 652
           +++W+S+I+G+CF      A      M   ++KP+ V++         +G    G+   A
Sbjct: 463 VISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAALAACAATGSLRCGKEIHA 521

Query: 653 LVIIHHMKNSGIYPN--------------------------VVTWTSLISGSLQNENYRE 686
            V+   + + G  PN                          VV+W  +++G + + +   
Sbjct: 522 HVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDI 581

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLI 745
           +L FF +M +    P+  T  +LL  C   G++  G E+ H +  K   + +      ++
Sbjct: 582 ALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMV 641

Query: 746 DMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           D+ S+ G L      + R       A W  ++ G  I+ N +   L    +LE   +P+ 
Sbjct: 642 DLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLE--LEPND 699

Query: 805 ITFTALLA 812
             +  LL+
Sbjct: 700 AGYHVLLS 707



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 238/532 (44%), Gaps = 87/532 (16%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           V +   C    A   G +  G+   +     L + N ++SM  R  +   A +VF  M +
Sbjct: 98  VALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPE 157

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            ++ SWN M+  Y   G+++ A  L+++M  +  +PD+ T+ C+L               
Sbjct: 158 RDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVL--------------- 202

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
               +S G  P+                L  GRE H ++LR GL  ++ V  +L+ MY K
Sbjct: 203 ----RSCGGVPD----------------LTMGREVHAHVLRFGLGVEVDVLNALVTMYAK 242

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGY-----CFKGLFVNAKKMLNQMEEEEIKPDLV 634
              ++ A++VFD M   + ++WN++I+G+     C  GL     ++   M E+E++P+L+
Sbjct: 243 CGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGL-----ELFLHMLEDEVEPNLM 297

Query: 635 S-----------------------------------WNSLVSGYSIWGQSKEALVIIHHM 659
           +                                    NSL+  YS  G+  EA  +   M
Sbjct: 298 TITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRM 357

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
           +      + ++WT++ISG  +N    ++L+ +  M+  ++ P+  T++S L  C  LG L
Sbjct: 358 ETR----DAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRL 413

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
             G ++H L    GFI+   VA  L++MY+KS  ++ A EVF+   +K + SW+ MI GF
Sbjct: 414 DVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGF 473

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
                  EA+  F  +L    +P+++TF A LAAC  +G +  G K   +      I   
Sbjct: 474 CFNHKNFEALYYFRHML-ADVKPNSVTFIAALAACAATGSLRCG-KEIHAHVLRQGIASE 531

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
               + ++DL  K G    AW        K D   W  +L     HGH + A
Sbjct: 532 GYVPNALLDLYVKCGQTGYAWAQFGAHGTK-DVVSWNIMLAGFVAHGHGDIA 582



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 190/437 (43%), Gaps = 46/437 (10%)

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            HG  Q  L LL   +S    P+  +   +       R  ++G  + G+       + L 
Sbjct: 74  AHGELQQALWLL---ESSPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLR 130

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           +G +++ M V+     +A +VF  M  R++ +WN ++ GY   G    A  + ++M    
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 629 IKPDLVSW-----------------------------------NSLVSGYSIWGQSKEAL 653
            +PD+ ++                                   N+LV+ Y+  G  + A 
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +   M  +    + ++W ++I+G  +N      L+ F+ M +++++PN  T++S+    
Sbjct: 251 KVFDGMSLT----DCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVAS 306

Query: 714 GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
           G L  L   KEIH L +K GF  D      LI MYS  G +  A  VF +   +   SW 
Sbjct: 307 GLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWT 366

Query: 774 CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
            MI G+   G   +A+ ++  +      PD +T  + LAAC + G ++ G K  + ++T 
Sbjct: 367 AMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHE-LATS 425

Query: 834 YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL-GSCRIHGHLEYAE 892
              I  I   + +V++  K+  +++A +  + MP K D   W +++ G C  H + E   
Sbjct: 426 KGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDK-DVISWSSMIAGFCFNHKNFEALY 484

Query: 893 IASRRLFKLEPCNSANY 909
                L  ++P NS  +
Sbjct: 485 YFRHMLADVKP-NSVTF 500



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 121/523 (23%), Positives = 216/523 (41%), Gaps = 51/523 (9%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
           C L        L+  +  HA +++ G +    D++ +L+  Y + GD  +A K F     
Sbjct: 200 CVLRSCGGVPDLTMGREVHAHVLRFG-LGVEVDVLNALVTMYAKCGDVEAARKVFDGMSL 258

Query: 256 RSYADWSSFL----EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFW 311
                W++ +    E++E   G     LE++  +    V      +T +      L    
Sbjct: 259 TDCISWNAMIAGHFENHECEAG-----LELFLHMLEDEVEPNLMTITSVTVASGLLSDLD 313

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
              E+HA  +KRGF  DV    +L+  Y     +  A  +FS + +  D + W  +I   
Sbjct: 314 FAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRM-ETRDAMSWTAMISGY 372

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            +N   + A++++  M+ ++      T+   L ACA +G    G ++H           +
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYI 432

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N L+ MY+++  +E A  VF  M D ++ SW+SMI+ +                   
Sbjct: 433 VVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFC------------------ 474

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                           F H +++  L   R M +   +PN  +    L A      L+ G
Sbjct: 475 ----------------FNHKNFE-ALYYFRHMLA-DVKPNSVTFIAALAACAATGSLRCG 516

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           +E H ++LR G+  + YV  +L+D+YVK      A   F     +++V+WN +++G+   
Sbjct: 517 KEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAH 576

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVT 670
           G    A    N+M E    PD V++ +L+ G S  G   +   + H M     I PN+  
Sbjct: 577 GHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKH 636

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +  ++    +     E   F  +M    I P++    +LL  C
Sbjct: 637 YACMVDLLSRVGRLTEGYNFINRMP---ITPDAAVWGALLNGC 676


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/559 (37%), Positives = 314/559 (56%), Gaps = 39/559 (6%)

Query: 552  RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            +++H  I   GL YD  + T    MYV  + +  A  VF+++ N     WN +I G+   
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSW----------------------------------- 636
            G F+++ ++ ++M E+ +KPD  ++                                   
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             +LV  Y+  G  + A ++   M       ++V+WTS+ISG   N    E+L FF  M+ 
Sbjct: 857  AALVDMYAKCGDIEAARLVFDKMA----VRDLVSWTSMISGYAHNGYNSETLGFFDLMRS 912

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
              + PN  ++ S+L  CG LG L+ G+  H   ++ GF  D  VAT ++DMYSK G+L  
Sbjct: 913  SGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDL 972

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            AR +F ++A K L  W+ MI  + I+G+G++AI LF ++++ G +P  +TFT +L+AC +
Sbjct: 973  ARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSH 1032

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            SGL+EEG  YF  M+ ++ I   + +Y+CMVDLLG+AG L EA D I  MP +PDA+IWG
Sbjct: 1033 SGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWG 1092

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            +LLG+CRIH +L+ AE  +  LF L+P ++  + L+ N+ A  +RW +VE++R  M   G
Sbjct: 1093 SLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRG 1152

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
               +  +S ++ D  VH F      HP   ++Y +L  L + MK LGYVP T  V  DI+
Sbjct: 1153 ANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIE 1212

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            EE K   L  H+E+LAI +GL+ T     +R+ KN R+C DCH A K +S +  R I +R
Sbjct: 1213 EEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVR 1272

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFH F +G CSC D W
Sbjct: 1273 DMHRFHRFEDGVCSCGDYW 1291



 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 201/715 (28%), Positives = 355/715 (49%), Gaps = 71/715 (9%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H+ + K G   D      L + Y KC  +++A K+F E     +  LWN  +    R 
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPH-PNVHLWNSTLRSYCRE 80

Query: 375 EKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLS 432
           ++WE  ++LF  M  ++ +A    TI   L+ACA +     GK IHG+  K+  + S++ 
Sbjct: 81  KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V + L+ +YS+  ++  A +VF+  +                                  
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQ---------------------------------- 166

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYG 551
            +PD + W  +++G+  +   +  L L   M  +     +  ++  V+ A  +L  +K G
Sbjct: 167 -RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAG 225

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
              HG ++R   D DL +  SL+++Y K  C + A  +F  M  +++++W+++I+ Y   
Sbjct: 226 SCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANN 285

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG---------------YSIWGQ-----SKE 651
                A  + ++M E+  +P+ V+  S +                  ++W       S  
Sbjct: 286 EAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVS 345

Query: 652 ALVIIHHMKNSGI-----------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             +I  +MK S               +VV+W +L+SG  QN    +S+  F  M  + I+
Sbjct: 346 TALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQ 405

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           P++  +  +L     LG+ Q    +H   +++GF  + +V   LI++YSK G+L  A ++
Sbjct: 406 PDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKL 465

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGL 819
           F+    + +  W+ MI  + I+G G EA+ +F ++++ +  +P+ +TF ++L+AC ++GL
Sbjct: 466 FKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGL 525

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           VEEG K FD M  DY + P  EH+  MVDLLG+ G L +A D I  MP      +WGALL
Sbjct: 526 VEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALL 585

Query: 880 GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
           G+CRIH ++E  E A++ LF L+P ++  Y L+ N+ A+  +W++V  LR  + E G+K 
Sbjct: 586 GACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKK 645

Query: 940 VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
           +   S +++   VH F A    HP + +IY  L  L ++M K  Y+PD   +  D
Sbjct: 646 MFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 213/457 (46%), Gaps = 50/457 (10%)

Query: 216 QMIKMGKIWN----------SDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           +M+++GK+ +          SD  V S L+  Y + G    A K F  +       W+S 
Sbjct: 117 RMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSM 176

Query: 265 LEDYESFGGEVQELLEVWGEL-HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
           +  Y+    + +E L ++ ++     V+     L  ++  C +L+    G  VH  +I+R
Sbjct: 177 VTGYQQ-NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRR 235

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
            FD D+ L  +L+N Y K    + A  LFS++ + +D + W+ +I     NE    A+ L
Sbjct: 236 EFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPE-KDVISWSTMIACYANNEAANEALNL 294

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F EM     +  S T+V  LQACA      EGK+IH   +    E + SV   LI MY +
Sbjct: 295 FHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMK 354

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
            +  + A  +F  +   ++ SW +++S Y   G    +  +F  M S  IQPD +     
Sbjct: 355 CSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAV----- 409

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
                                         +V  +L A +EL + +     HGY++R+G 
Sbjct: 410 ------------------------------AVVKILAASSELGIFQQALCLHGYVVRSGF 439

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           + +++VG SL+++Y K   L +A ++F  M  R++V W+S+I+ Y   G    A ++ +Q
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ 499

Query: 624 M-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           M +   ++P+ V++ S++S  S  G  +E L I   M
Sbjct: 500 MVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRM 536



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 147/306 (48%), Gaps = 3/306 (0%)

Query: 201  TNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD 260
            T+   C S +K  HA++   G  ++S  + K  I  Y+ F    +A+  F    +     
Sbjct: 727  TDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIM-YVSFNRIDAASIVFEDIPNPCSFL 785

Query: 261  WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
            W+  +  + +  G     LE++ ++  KG+          LK C  L     G  +H  L
Sbjct: 786  WNVMIRGFAT-DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHL 844

Query: 321  IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            +  G   D+ +  AL++ Y KC D+E+A  +F +++ + D + W  +I     N      
Sbjct: 845  VCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA-VRDLVSWTSMISGYAHNGYNSET 903

Query: 381  IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
            +  F  M+ S       +I+ +L AC  +GA  +G+  H YV+++  E ++ V   ++ M
Sbjct: 904  LGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDM 963

Query: 441  YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
            YS+   L+LA  +FD     +L  W++MI+SY   G+   A  LF++M  + ++P  +T+
Sbjct: 964  YSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTF 1023

Query: 501  NCLLSG 506
             C+LS 
Sbjct: 1024 TCVLSA 1029



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 174/400 (43%), Gaps = 40/400 (10%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA +   G  +D  +       Y     +++A+ +F ++ +     LWN +I     +
Sbjct: 738  KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPN-PCSFLWNVMIRGFATD 796

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             ++ ++++L+ +M     K         L++CA +     GK IH +++     ++L V 
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              L+ MY++   +E A  VF                               +KM      
Sbjct: 857  AALVDMYAKCGDIEAARLVF-------------------------------DKMAVR--- 882

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D+++W  ++SG+  +G     L     M+S G  PN  S+  VL A   L  L+ G   
Sbjct: 883  -DLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWF 941

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H Y+++ G ++D+ V T++MDMY K   L  A+ +FD    +++V W+++I+ Y   G  
Sbjct: 942  HSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHG 1001

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT-WTS 673
              A  + +QM +  ++P  V++  ++S  S  G  +E  +    M    +    ++ +  
Sbjct: 1002 RKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYAC 1061

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            ++    +     E++     M    ++P+++   SLL  C
Sbjct: 1062 MVDLLGRAGQLSEAVDLIENMP---VEPDASIWGSLLGAC 1098



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 8/297 (2%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
            +L+  Y + GD  +A   F     R    W+S +  Y +  G   E L  +  +   GVI
Sbjct: 858  ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGY-AHNGYNSETLGFFDLMRSSGVI 916

Query: 292  F-RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
              R  IL+++L  C  L A   G   H+ +I+ GF+FD+ +  A+M+ Y KC  ++ A  
Sbjct: 917  PNRVSILSVLLA-CGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 351  LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
            LF E +  +D + W+ +I     +     AI LF +M  +  +    T   +L AC+  G
Sbjct: 976  LFDETAG-KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 1034

Query: 411  AFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
               EGK     + +   +   LS   C++ +  R  +L  A  + ++M  + + S W S+
Sbjct: 1035 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            + +      +D+A  + + +    + P    ++ LLS  +   S  N +  +R M +
Sbjct: 1095 LGACRIHNNLDLAEKIADHL--FHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMA 1149



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 11/179 (6%)

Query: 705 TMSSLLQTCGGLGLLQNGK---EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +  L Q C       NG+   ++H    K G + D + AT L  +Y+K  +L++AR+VF
Sbjct: 6   VLVDLFQAC------NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITFTALLAACKNSGLV 820
            ++ +  +  WN  +  +      +E + LFH ++ T G  PD  T    L AC    ++
Sbjct: 60  DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           E G         +  I   +   S +V+L  K G + EA         +PD  +W +++
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMV 177


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 255/888 (28%), Positives = 425/888 (47%), Gaps = 93/888 (10%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGK 288
            +LI  Y + GD+  A   F    SR   D   W++ +       G   + + ++  L  +
Sbjct: 270  ALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVE-AGRHGDAMAIFRRLRLE 328

Query: 289  GVIFRS-RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
            G+   S  ++TI+  L    + F    + H  + + G+  DV +  A+++ Y KC    +
Sbjct: 329  GMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSA 388

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A  +F  +    D + WN ++      + +   +  F  M  +       + + +L AC+
Sbjct: 389  AWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACS 448

Query: 408  KVGAFHEGKQIHGYVL---KSALESNLSVCNCLISMYSRNNKLELATRVFDSMK--DHNL 462
               A   G++IH  +L   +  +ES  SV   L+SMY +   +  A  VF  M     +L
Sbjct: 449  NSEALDFGRKIHSLILTRRRDYVES--SVATMLVSMYGKCGSIAEAELVFKEMPLPSRSL 506

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
             +WN M+ +Y        A+    +M    + PD +++  +LS  +     Q        
Sbjct: 507  VTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQ-------- 558

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                               V  + +L+ G  S              + T+L+ M+ +   
Sbjct: 559  -------------------VLRMCILESGYRSA------------CLETALISMHGRCRE 587

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------- 632
            L+ A+ VFD M + ++V+W +++S       F     +  +M+ E + PD          
Sbjct: 588  LEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDT 647

Query: 633  -------------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                     +   N+L++ YS  G  +EAL     MK      +
Sbjct: 648  CLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR----D 703

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +V+W  + +   Q    +E++  F  MQ E +KP+  T S+ L   GG  L+ +GK  H 
Sbjct: 704  LVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHG 763

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            L  ++G   D  VATGL+ +Y+K G L  A  +FR +   T+   N +I   A +G  +E
Sbjct: 764  LAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEE 823

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ +F ++ + G +PD  T  ++++AC ++G+VEEG   F +M   + I PT+EHY+C V
Sbjct: 824  AVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFV 883

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG L+ A   IR MPF+ +  +W +LLG+C++ G  E  E  ++R+ +L+P NSA
Sbjct: 884  DLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSA 943

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             + ++ N+   + +W+D +  R  + +  VK+    SW++I + VH F A    HP T E
Sbjct: 944  AHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDE 1003

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY  L  L   M++ GY  D      D ++E K K L  H+E++AI +GL+ T     ++
Sbjct: 1004 IYVVLDKLELLMRRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLK 1060

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++KN RVC DCHTA KY+S++ GREI +RD  RFHHF  G CSC DCW
Sbjct: 1061 IVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  227 bits (578), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 192/746 (25%), Positives = 323/746 (43%), Gaps = 86/746 (11%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV---KSLIFHYLEFGDFTSAAKAFFLY 253
            LN     R L+  +S HA + ++G    S        ++I  Y + G    A   F   
Sbjct: 133 MLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTI 192

Query: 254 FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLG 313
             +    W++    Y        + L ++ E+  + +          L  CT L     G
Sbjct: 193 PEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---G 249

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED-DLL-WNEIIMVK 371
             +H+ L + G  FD     AL+N YGKC D E A  +F  ++  ++ DL+ WN +I   
Sbjct: 250 TWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISAS 309

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESN 430
           +   +  +A+ +FR ++    +  S T++ +L A A  G  F   ++ HG + +S    +
Sbjct: 310 VEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRD 369

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           + V N +ISMY++                                G+   AW++F ++  
Sbjct: 370 VVVGNAIISMYAK-------------------------------CGFFSAAWTVFRRI-- 396

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
            R + D+I+WN +L       S+  V+     M   G  PN  S   +L A +    L +
Sbjct: 397 -RWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDF 455

Query: 551 GRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISG 607
           GR+ H  IL    DY +  V T L+ MY K   +  A+ VF  M   +R++V WN ++  
Sbjct: 456 GRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA 515

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV------------------SGY------ 643
           Y        A   L +M +  + PD +S+ S++                  SGY      
Sbjct: 516 YAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLE 575

Query: 644 ----SIWGQSKE---ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
               S+ G+ +E   A  +   M     + +VV+WT+++S + +N +++E    F +MQ 
Sbjct: 576 TALISMHGRCRELEQARSVFDEMD----HGDVVSWTAMVSATAENRDFKEVHHLFRRMQL 631

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           E + P+  T+++ L TC     L  GK IH    + G   D  V   L++MYS  G+ + 
Sbjct: 632 EGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWRE 691

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           A   F     + L SWN M   +A  G  KEA+LLF  +   G +PD +TF+  L     
Sbjct: 692 ALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGG 751

Query: 817 SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
           S LV +G K F  ++ +  +   +   + +V L  K G LDEA    R    +    +  
Sbjct: 752 SALVSDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRG-ACQWTVVLLN 809

Query: 877 ALLGSCRIHGHLEYAEIASRRLFKLE 902
           A++G+   HG   ++E A +  +K++
Sbjct: 810 AIIGALAQHG---FSEEAVKMFWKMQ 832



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 141/562 (25%), Positives = 247/562 (43%), Gaps = 84/562 (14%)

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           T +L+ C        G   H  +   G +  + L   L+N Y +C  +E A+ +FS++ +
Sbjct: 29  TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQF-SSAKAISRTIVKMLQACAKVGAFHEGK 416
             + + W  +I    ++  +  A  LFR M   SSA   S T+V ML ACA       G+
Sbjct: 89  -RNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 417 QIHGYVLKSALESNLS----VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            IH  + +  LE   +    V N +I+MY++    E A  VF ++ + ++ SW +M  +Y
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
                              R  PD                    L + R M      PN 
Sbjct: 208 A---------------QERRFYPD-------------------ALRIFREMLLQPLAPNV 233

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            +    L A T LR    G   H  +   GL +D   G +L++MY K    + A  VF  
Sbjct: 234 ITFITALGACTSLR---DGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKA 290

Query: 593 MKNR---NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS----- 644
           M +R   ++V+WN++IS     G   +A  +  ++  E ++P+ V+  ++++  +     
Sbjct: 291 MASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD 350

Query: 645 ----------IW--GQSKEALV---IIHHMKNSGIYP-------------NVVTWTSLIS 676
                     IW  G  ++ +V   II      G +              +V++W +++ 
Sbjct: 351 FGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLG 410

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL--KNGF 734
            S   +++ + +  F  M    I PN  +  ++L  C     L  G++IH L L  +  +
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKS--ANKTLASWNCMIMGFAIYGNGKEAILLF 792
           ++ + VAT L+ MY K G++  A  VF++    +++L +WN M+  +A     KEA    
Sbjct: 471 VESS-VATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGAL 529

Query: 793 HELLETGFQPDAITFTALLAAC 814
            E+L+ G  PDA++FT++L++C
Sbjct: 530 MEMLQGGVLPDALSFTSVLSSC 551



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 169/391 (43%), Gaps = 53/391 (13%)

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           + +LQ+  +   L  G+ +H  I   GL+  L++G  L++MYV+   L+ A  +F  M+ 
Sbjct: 29  TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 596 RNIVAWNSLISGYCFKGLFVNA--------------------KKMLNQ------------ 623
           RN+V+W +LIS     G F  A                      MLN             
Sbjct: 89  RNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 624 ---------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                    +E E     LV  N++++ Y+  G  ++A+ +   +       +VV+WT++
Sbjct: 149 IHAMIWELGLERESTTATLVG-NAMINMYAKCGSPEDAIAVFLTIPEK----DVVSWTAM 203

Query: 675 ISGSLQNEN-YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
                Q    Y ++L+ F +M  + + PN  T  + L  C  L   ++G  +H L  + G
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAG 260

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT---LASWNCMIMGFAIYGNGKEAIL 790
              D      LI+MY K G+ + A  VF+  A++    L SWN MI      G   +A+ 
Sbjct: 261 LGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320

Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
           +F  L   G +P+++T   +L A   SG+     + F     +   +  +   + ++ + 
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMY 380

Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            K G+   AW   R + +K D   W  +LG+
Sbjct: 381 AKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/636 (34%), Positives = 342/636 (53%), Gaps = 39/636 (6%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            Y  L   D A  +F+ + S    PD I WN LL+G    GS + +   +R + +   RP+
Sbjct: 159  YFKLSRGDDARKVFDTVPS----PDTILWNTLLAG--LPGS-EALEAFVRMVDAGRVRPD 211

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             ++++  L+A  E   +  GR  HGY ++ GL    +V T LM +Y K   + +AQ +FD
Sbjct: 212  STTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFD 271

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK- 650
             M N ++VA+N+LISGY   G+  ++ ++  ++     +P+  +  +++  YS +G    
Sbjct: 272  RMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELL 331

Query: 651  ----EALVIIHHMKNSGIYPNVVT--------------------------WTSLISGSLQ 680
                 A V+   +    +    +T                          W ++ISG  Q
Sbjct: 332  ARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQ 391

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
            N     ++  F  MQ+ +++PN  T+SS L  C  LG L  GK +H +  K     + YV
Sbjct: 392  NGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYV 451

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             T LIDMY+K G++  AR +F +  NK + SWN MI G+ ++G G EA+ L+ ++L+   
Sbjct: 452  MTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARI 511

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
             P + TF +++ AC + GLV+EG K F  M+ +Y I P IEH +CMVDLLG+AG L+EA 
Sbjct: 512  LPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEAL 571

Query: 861  DFIRTMPFKP-DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
            + I   P       +WGALLG+C +H + + A++AS++LF+L+  N+  Y L+ NL    
Sbjct: 572  ELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSK 631

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
              + +   +R       +      + I+I    HVF A    HP +  IY  L  L ++M
Sbjct: 632  KHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKM 691

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
             + GY P T     D++EEEK  ++  H+EKLAI +GL+ T+    IR+IKN RVC DCH
Sbjct: 692  IEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCH 751

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             A K++S V  R I +RD +RFHHFR+G CSC D W
Sbjct: 752  NATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 222/509 (43%), Gaps = 48/509 (9%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           ++ ++ H   +  G  + +D  V S +   Y +      A K F    S     W++ L 
Sbjct: 131 AAARTLHGLSVAAG--YAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188

Query: 267 DYESFGGEVQELLEVWGELHGKG-VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
                G    E LE +  +   G V   S  L   L+   +     +G  VH   +K G 
Sbjct: 189 -----GLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGL 243

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
               H+   LM+ Y KC D++SA  LF  + D  D + +N +I     N   E++++LF+
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDSAQFLFDRM-DNPDLVAYNALISGYSVNGMVESSVELFK 302

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           E+  S  +  S T+V ++   +  G     + +H +V+K+ L+++  V   L ++Y R N
Sbjct: 303 ELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLN 362

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            +E A  +FD+M +  + SWN+MIS Y   G  ++A +LF  M    +QP+ IT      
Sbjct: 363 DMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPIT------ 416

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
                                        +S  L A   L  L  G+  H  I +  L+ 
Sbjct: 417 -----------------------------ISSTLSACAHLGALSLGKWVHRIISKEKLEL 447

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           ++YV T+L+DMY K   +  A+ +FD M N+N+V+WN++ISGY   G    A K+   M 
Sbjct: 448 NVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDML 507

Query: 626 EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENY 684
           +  I P   ++ S++   S  G   E   +   M N   I P +   T ++    +    
Sbjct: 508 DARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKL 567

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            E+L+   +  Q  I P      +LL  C
Sbjct: 568 NEALELISEFPQSAIGPG--VWGALLGAC 594


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/737 (32%), Positives = 363/737 (49%), Gaps = 78/737 (10%)

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            ++ K   A +  +EM  +     S +   + +AC ++ +   G+ +H  +       ++ 
Sbjct: 60   KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            + NC++ MY     LE A ++FD M + N  S  +MIS+Y   G +D A  LF+      
Sbjct: 120  LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS------ 173

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                                         GM + G +P  S  + +L+++   R L +GR
Sbjct: 174  -----------------------------GMLASGDKPPSSMYTTLLKSLVNPRALDFGR 204

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H +++R GL  +  + T +++MYVK   L  A+ VFD M  +  VA   L+ GY   G
Sbjct: 205  QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264

Query: 613  LFVNAKKMLNQMEEEEIKPD----------LVSWNSLVSGYSI------WGQSKEALV-- 654
               +A K+   +  E ++ D            S   L  G  I       G   E  V  
Sbjct: 265  RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGT 324

Query: 655  --IIHHMKNSGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
              +  ++K S              PN V+W+++ISG  Q   + E++K F  ++ ++   
Sbjct: 325  PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASI 384

Query: 702  -NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
             NS T +S+ Q C  L     G ++H   +K   I   Y  + LI MYSK G L  A EV
Sbjct: 385  LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEV 444

Query: 761  FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
            F    N  + +W   I G A YGN  EA+ LF +++  G +P+++TF A+L AC ++GLV
Sbjct: 445  FESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLV 504

Query: 821  EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            E+G    D+M   YN+ PTI+HY CM+D+  ++G LDEA  F++ MPF+PDA  W   L 
Sbjct: 505  EQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
             C  H +LE  EIA   L +L+P ++A Y L  NL   + +WE+   +   M+E  +K  
Sbjct: 565  GCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKE 624

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
            L  SWIQ    +H F      HP T EIY +L      M+   +           +  E+
Sbjct: 625  LSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMF---------QCNMTER 675

Query: 1001 GKVLLSHTEKLAIVYGLMKT--KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
             + LL H+E+LAI +GL+     + API+V KN R C DCH  AK++SLV G EI +RD 
Sbjct: 676  REQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDS 735

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFHHF+EG+CSCND W
Sbjct: 736  RRFHHFKEGKCSCNDYW 752



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/522 (23%), Positives = 230/522 (44%), Gaps = 47/522 (9%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
           C      + R LS  +  H +M +MG I N   ++++ +   Y E      A K F    
Sbjct: 88  CLFEACRELRSLSHGRLLHDRM-RMG-IENPSVLLQNCVLQMYCECRSLEDADKLFDEMS 145

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
             +    ++ +  Y    G + + + ++  +   G    S + T +LK      A   G 
Sbjct: 146 ELNAVSRTTMISAYAE-QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGR 204

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +I+ G   +  ++  ++N Y KC  +  A ++F +++ ++  +    +++   + 
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA-VKKPVACTGLMVGYTQA 263

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            +  +A+KLF ++     +  S     +L+ACA +   + GKQIH  V K  LES +SV 
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+  Y + +  E A R F  +++ N  SW+++IS Y  +   + A   F  + S    
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK--- 380

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
                 N  +   FT+ S                         + QA + L     G + 
Sbjct: 381 ------NASILNSFTYTS-------------------------IFQACSVLADCNIGGQV 409

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H   ++  L    Y  ++L+ MY K  CL +A EVF++M N +IVAW + ISG+ + G  
Sbjct: 410 HADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG---QSKEALVIIHHMKNSGIYPNVVTW 671
             A ++  +M    +KP+ V++ ++++  S  G   Q K  L  +  ++   + P +  +
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM--LRKYNVAPTIDHY 527

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +I    ++    E+LKF   M+    +P++ +    L  C
Sbjct: 528 DCMIDIYARSGLLDEALKF---MKNMPFEPDAMSWKCFLSGC 566


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 227/773 (29%), Positives = 380/773 (49%), Gaps = 101/773 (13%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            +++ Y    ++  A KLF+E + + + + W+ ++    +N      ++ F +M     K 
Sbjct: 74   MISAYANLGNLVEARKLFNE-TPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKP 132

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
               T+  +L+AC+ +   H GK IH Y +K  LE+N+ V   L+ MYS+   L  A  +F
Sbjct: 133  SQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF 192

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
             S+ D                                  + + + W  +L+G+  +G   
Sbjct: 193  FSLPD----------------------------------RKNYVQWTAMLTGYAQNGESL 218

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
              +   + M++ G   N  +   +L A T +    +GR+ HG I+ +G   ++YV ++L+
Sbjct: 219  KAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALV 278

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            DMY K   L +A+ + D M+  ++V WNS+I G    G    A  + ++M   +I+ D  
Sbjct: 279  DMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDF 338

Query: 635  SWNSLV---------------------SGYSIWGQSKEALVIIHHMK----------NSG 663
            ++ S++                     +G+        ALV ++  +          N  
Sbjct: 339  TYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI 398

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
            +  +V++WTSL++G + N  + ++L+ F  M+   +  +   ++ +   C  L +++ G+
Sbjct: 399  LDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGR 458

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            ++H   +K+           LI MY+K G L+ A  V      + + SW  +I+G+A   
Sbjct: 459  QVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYA--- 515

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
                                             +GLVE G  YF+SM   Y I P  + Y
Sbjct: 516  --------------------------------QNGLVETGQSYFESMEKVYGIKPASDRY 543

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +CM+DLLG+AG ++EA   +  M  +PDATIW +LL +CR+HG+LE  E A + L KLEP
Sbjct: 544  ACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEP 603

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             NS  Y L+ N+ +++ RWED   +R +M  +G+     +SWI++   VH F +E   HP
Sbjct: 604  SNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHP 663

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
               EIY ++  ++  +K+ G+VPD     +D+DEE K + L  H+EKLA+ +GL+     
Sbjct: 664  LAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKG 723

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCWQ 1076
            APIR+ KN RVC DCH+A KY+S +  R I LRD   FHHF EG+CSC D W+
Sbjct: 724  APIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCGDFWK 776



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 227/529 (42%), Gaps = 76/529 (14%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y   G+   A K F      +   WSS +  Y   G EV+ L + + ++   G   
Sbjct: 74  MISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQ-FSQMWSDGQKP 132

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               L  +L+ C+ L     G  +H   IK   + ++ +   L++ Y KC+ +  A  LF
Sbjct: 133 SQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF 192

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             + D ++ + W  ++    +N +   AI+ F+EM+    ++   T   +L AC  + A+
Sbjct: 193 FSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAY 252

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G+Q+HG ++ S    N+ V + L+ MY++   L  A  + D+M+  ++  WNSMI   
Sbjct: 253 AFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGC 312

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              GY++ A  LF+KM++  I+ D           FT+ S                    
Sbjct: 313 VTHGYMEEALVLFHKMHNRDIRID----------DFTYPS-------------------- 342

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
                VL+++   + LK G   H   ++ G D    V  +L+DMY K   L  A +VF+ 
Sbjct: 343 -----VLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNK 397

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD-------------------- 632
           + ++++++W SL++GY   G    A ++   M    +  D                    
Sbjct: 398 ILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFG 457

Query: 633 ---------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                          L + NSL++ Y+  G  ++A+ +   M+      NV++WT++I G
Sbjct: 458 RQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETR----NVISWTAIIVG 513

Query: 678 SLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             QN        +F  M++   IKP S   + ++   G  G +   + +
Sbjct: 514 YAQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHL 562


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 243/783 (31%), Positives = 393/783 (50%), Gaps = 80/783 (10%)

Query: 327  FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
              V L  AL++ + +  DV +A  +F  + +  D   WN ++    +   ++ A+ L+  
Sbjct: 67   LSVRLGNALLSMFVRFGDVGNAWNVFGRMGE-RDLFSWNVLVGGYTKAGFFDEALCLYHR 125

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
            + ++  +    T   +L++CA       G+++H +V++   + ++ V N LI+MY +   
Sbjct: 126  ILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVK--- 182

Query: 447  LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
                                         G V  A  LF+KM +     D I+WN ++SG
Sbjct: 183  ----------------------------CGDVVSARMLFDKMPTR----DRISWNAMISG 210

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            +F +      L L   M+ L   P+  +++ V+ A   L   + G + H Y++R   D +
Sbjct: 211  YFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGN 270

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN-AKKMLNQME 625
            + V  SL+ MY+     + A+ VF  M+ R++V+W ++ISG C   L  + A +    ME
Sbjct: 271  ISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISG-CVDNLLPDKALETYKTME 329

Query: 626  EEEIKPD-----------------------------------LVSWNSLVSGYSIWGQSK 650
                 PD                                   +V  NSL+  YS   + +
Sbjct: 330  ITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIE 389

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            +AL I H + +     +V++WTS+I+G   N    E+L FF +M  +  KPNS T+ S L
Sbjct: 390  KALEIFHQIPDK----DVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISAL 444

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
              C  +G L  GKEIH   LK G   D ++   ++D+Y + G +++A   F  +  K + 
Sbjct: 445  SACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLN-EKDVG 503

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +WN ++ G+A  G G   + LF  ++E+   PD +TF +LL AC  SG+V EG +YF  M
Sbjct: 504  AWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRM 563

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
              +Y+I P ++HY+C+VDLLG+AG L+EA +FI  MP KPD  IWGALL +CRIH H+  
Sbjct: 564  KVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLL 623

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             E+A++ +FK +  +   Y L+ NL A S +W++V ++R +M E G+      SW+++  
Sbjct: 624  GELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKG 683

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             VH F +    HP   EI   L     +MK  G+     C   D  +  K  +   H+E+
Sbjct: 684  KVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGF-NGQECSSMDGIQTSKADIFCGHSER 742

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
             AI Y L+ +    PI V KN  +C  CH+  K++S +  REI +RD  +FHHF++G CS
Sbjct: 743  QAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCS 802

Query: 1071 CND 1073
            C D
Sbjct: 803  CGD 805



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 233/568 (41%), Gaps = 79/568 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  ++ FGD  +A   F     R    W+  +  Y    G   E L ++  +   G+ 
Sbjct: 74  ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTK-AGFFDEALCLYHRILWAGIR 132

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L+ C   M    G EVHA +++  FD DV +  AL+  Y KC DV SA  L
Sbjct: 133 PDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARML 192

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F ++    D + WN +I     N++    ++LF  M+  S      T+  ++ AC  +G 
Sbjct: 193 FDKMPT-RDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGD 251

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G Q+H YV+++A + N+SV N LI MY      + A  VF  M+  ++ SW ++IS 
Sbjct: 252 ERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS- 310

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
               G VD             + PD                    L   + M+  G  P+
Sbjct: 311 ----GCVD------------NLLPD------------------KALETYKTMEITGTMPD 336

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             +++ VL A   L  L  G + H    R G    + V  SL+DMY K   ++ A E+F 
Sbjct: 337 EVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFH 396

Query: 592 NMKNRNIVAWNSLISGY-----CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS----- 641
            + ++++++W S+I+G      CF+ L    K +L        KP+ V+  S +S     
Sbjct: 397 QIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS------KPNSVTLISALSACARV 450

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVV-------------------------TWTSLIS 676
           G  + G+   A  +   M   G  PN +                          W  L++
Sbjct: 451 GALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNEKDVGAWNILLT 510

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
           G  Q       ++ F +M + +I P+  T  SLL  C   G++  G E       N  I 
Sbjct: 511 GYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHIT 570

Query: 737 DAYVATG-LIDMYSKSGNLKSAREVFRK 763
                   ++D+  ++G L  A E   +
Sbjct: 571 PNLKHYACVVDLLGRAGKLNEAHEFIER 598



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 216/487 (44%), Gaps = 43/487 (8%)

Query: 228 DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           D+V +LI  Y++ GD  SA   F    +R    W++ +  Y     E  E LE++  +  
Sbjct: 171 DVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFE-NDECLEGLELFFRMRE 229

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
             +      +T ++  C  L    LG ++H+ +++  +D ++ +  +L+  Y      + 
Sbjct: 230 LSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKE 289

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  +FS + +  D + W  II   + N   + A++ ++ M+ +       TI  +L ACA
Sbjct: 290 AESVFSGM-ECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACA 348

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +G    G ++H    ++     + V N LI MYS+  ++E A  +F  + D ++ SW S
Sbjct: 349 SLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTS 408

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +I                   N  RI        C              L   R M  L 
Sbjct: 409 VI-------------------NGLRINN-----RCF-----------EALIFFRKM-ILK 432

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            +PN  ++   L A   +  L  G+E H + L+ G+ +D ++  +++D+YV+   ++ A 
Sbjct: 433 SKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTAL 492

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
             F N+  +++ AWN L++GY  KG      ++  +M E EI PD V++ SL+   S  G
Sbjct: 493 NQF-NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSG 551

Query: 648 QSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
              E L     MK N  I PN+  +  ++    +     E+ +F  +M    IKP+    
Sbjct: 552 MVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMP---IKPDPAIW 608

Query: 707 SSLLQTC 713
            +LL  C
Sbjct: 609 GALLNAC 615


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 698

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/716 (31%), Positives = 371/716 (51%), Gaps = 69/716 (9%)

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHG-YVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            A +  +  +LQ+C + G    G+ +H   VL  A  ++  + N LI+MYS    L  A R
Sbjct: 18   ATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALR 77

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            +F +M   N  SW +++S                                 LS +  H  
Sbjct: 78   LFAAMPRRNAVSWTTLVSG--------------------------------LSQNLMHAD 105

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                   +R     G  P   ++S   +A   L     G + H   +R G D +L+V ++
Sbjct: 106  ALAAFAAMR---RAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASN 162

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE-IKP 631
            L DMY K   L  A  VFD M  ++ VAW ++I GY   G    A      M+ E  +  
Sbjct: 163  LADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGA 222

Query: 632  DLVSWNSLVS---------------------GYSIWGQSKEALVIIHHMKNS-------- 662
            D   + S++S                     G+ +    + AL+ ++             
Sbjct: 223  DQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL 282

Query: 663  GIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
             I P   NVV+ TS+I G ++ +   E+L  +++++++ ++PN  T SS+++ C    LL
Sbjct: 283  KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALL 342

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
            + G ++H   +K   I+D++V + L+DMY K G +  + ++F +   +T  +WN +I  F
Sbjct: 343  EQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVF 402

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A +G+G+EAI  F  ++ +G +P+ I F +LL AC ++GLV+EG KYF SM   + I P 
Sbjct: 403  AQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPK 462

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
             EHYSC++D  G+AG LDEA+ FI  MP KP+A  W +LLG+CR+ G  E  E+A++ L 
Sbjct: 463  EEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLM 522

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            KLEP N+  +  +  + A   +WEDV+ +R  M +  +K +  +SW+  ++  HVF +E 
Sbjct: 523  KLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSED 582

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP   +IY +L  L + +K+ GY+PDT  +  ++++  K ++L  H+E++A+ + L+ 
Sbjct: 583  WSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALIS 642

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              +  PI V KN R+C DCHTA K++  V  R+I +RD +RFHHF  G CSC D W
Sbjct: 643  MPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 140/608 (23%), Positives = 254/608 (41%), Gaps = 63/608 (10%)

Query: 177 PPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH 236
           PP    A    L+ +        +  + R L      HA+++  G    S  +   LI  
Sbjct: 12  PPAPDAATTVHLASLLQSCGRAGDLRRGRLL------HARLVLSGAAAASTFLANHLITM 65

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE-----LHGKGVI 291
           Y    D  SA + F     R+   W++ +       G  Q L+          +   GV 
Sbjct: 66  YSHCADLASALRLFAAMPRRNAVSWTTLVS------GLSQNLMHADALAAFAAMRRAGVA 119

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L+   +    L A   G ++H   ++ GFD ++ +   L + Y KC  +  A ++
Sbjct: 120 PTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRV 179

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS-AKAISRTIVKMLQACAKVG 410
           F ++   +D + W  +I    +N   E A+  FR+M+      A       +L A   + 
Sbjct: 180 FDQMPQ-KDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLK 238

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD-SMKDHNLSSWNSMI 469
                K IH  V K+  E  ++V N LI MY+++  +E A+RV        N+ S  SMI
Sbjct: 239 DGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMI 298

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
             Y     V+ A  ++ ++    ++P+  T++ ++ G                       
Sbjct: 299 DGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKG----------------------- 335

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                    +QA     LL+ G + H  +++  L  D +VG++L+DMY K   +  + ++
Sbjct: 336 -------CAMQA-----LLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQL 383

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F+ ++ R  +AWN++I+ +   G    A +  ++M    I+P+ +++ SL++  S  G  
Sbjct: 384 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLV 443

Query: 650 KEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            E L   + MK + GI P    ++ +I    +     E+ KF  +M    IKPN+    S
Sbjct: 444 DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP---IKPNAYGWCS 500

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSA 765
           LL  C   G  + G E+    L      +  +   L  +Y+  G   ++K+ R++ R S 
Sbjct: 501 LLGACRMRGSKELG-EVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSR 559

Query: 766 NKTLASWN 773
            K L  ++
Sbjct: 560 IKKLPGFS 567


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g35130,
            chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 245/783 (31%), Positives = 393/783 (50%), Gaps = 77/783 (9%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
            D  L  AL  F    R +E A +LF E++   D  LWN +I        +  A++ +  M
Sbjct: 64   DPALTRALRGF-ADSRLMEDALQLFDEMNK-ADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
             F+  KA + T   ++++ A + +  EGK+IH  V+K    S++ VCN LIS+Y +    
Sbjct: 122  VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
              A +VF+ M +                                    DI++WN ++SG+
Sbjct: 182  WDAEKVFEEMPER-----------------------------------DIVSWNSMISGY 206

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-D 566
               G   + L L + M   GF+P+  S    L A + +   K G+E H + +R+ ++  D
Sbjct: 207  LALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGD 266

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            + V TS++DMY K   +  A+ +F+ M  RNIVAWN +I  Y   G   +A     +M E
Sbjct: 267  VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE 326

Query: 627  EE-IKPDLVS-------------------------------WNSLVSGYSIWGQSKEALV 654
            +  ++PD+++                                 +L+  Y   GQ K A V
Sbjct: 327  QNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEV 386

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            I   M       NV++W S+I+  +QN     +L+ F ++    + P+STT++S+L    
Sbjct: 387  IFDRMAEK----NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
                L  G+EIH   +K+ +  +  +   L+ MY+  G+L+ AR+ F     K + SWN 
Sbjct: 443  ESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNS 502

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            +IM +A++G G+ ++ LF E++ +   P+  TF +LLAAC  SG+V+EGW+YF+SM  +Y
Sbjct: 503  IIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             I P IEHY CM+DL+G+ G    A  F+  MPF P A IWG+LL + R H  +  AE A
Sbjct: 563  GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            + ++FK+E  N+  Y L++N+ A + RWEDV R++  M+  G+      S ++     HV
Sbjct: 623  AEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHV 682

Query: 955  FSAEGAPHPATGEIYFELYHLVSEM--KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            F+     H AT +IY E+  +VS M  ++  YV     +  +   + +      H+ +LA
Sbjct: 683  FTNGDRSHVATNKIY-EVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLA 741

Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
              +GL+ T++   + V  NTR+C  CH   +  S +  REI + D   FHHF  G CSC 
Sbjct: 742  TCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCG 801

Query: 1073 DCW 1075
            + W
Sbjct: 802  NYW 804



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 250/561 (44%), Gaps = 86/561 (15%)

Query: 240 FGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           F D      A  L+   + AD   W+  ++ + S G  + E ++ +  +   GV   +  
Sbjct: 74  FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI-EAVQFYSRMVFAGVKADTFT 132

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              ++K    + +   G ++HA +IK GF  DV++  +L++ Y K      A K+F E+ 
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D + WN +I   L      +++ LF+EM     K    + +  L AC+ V +   GK
Sbjct: 193 E-RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251

Query: 417 QIHGYVLKSALES-NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +IH + ++S +E+ ++ V   ++ MYS+  ++  A R+F+ M   N+ +WN MI  Y   
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311

Query: 476 GYVDVAWSLFNKMNSSR-IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
           G V  A+  F KM+    +QPD+IT                         S+   P    
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVIT-------------------------SINLLP---- 342

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            S +L+          GR  HGY +R G    + + T+L+DMY +   L++A+ +FD M 
Sbjct: 343 ASAILE----------GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------------- 635
            +N+++WNS+I+ Y   G   +A ++  ++ +  + PD  +                   
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452

Query: 636 ----------W------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                     W      NSLV  Y++ G  ++A    +H+    +  +VV+W S+I    
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI----LLKDVVSWNSIIMAYA 508

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
            +   R S+  F +M    + PN +T +SLL  C   G++  G E      +   I    
Sbjct: 509 VHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 568

Query: 740 VATG-LIDMYSKSGNLKSARE 759
              G ++D+  ++GN  +A+ 
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKR 589



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 230/512 (44%), Gaps = 54/512 (10%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L   K  HA +IK+G +  SD  V  SLI  Y++ G    A K F     R    W+S +
Sbjct: 146 LEEGKKIHAMVIKLGFV--SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKR 323
             Y + G     L+ ++ E+   G  F+    + +  L  C+ + +  +G E+H   ++ 
Sbjct: 204 SGYLALGDGFSSLM-LFKEMLKCG--FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260

Query: 324 GFDF-DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
             +  DV +  ++++ Y K  +V  A ++F+ +    + + WN +I    RN +  +A  
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ-RNIVAWNVMIGCYARNGRVTDAFL 319

Query: 383 LFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            F++M + +  +    T + +L A A +    EG+ IHGY ++     ++ +   LI MY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMY 375

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
               +L+ A  +FD M + N+ SWNS+I++Y   G    A  LF ++  S + PD     
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPD----- 430

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
                                          ++++ +L A  E   L  GRE H YI+++
Sbjct: 431 ------------------------------STTIASILPAYAESLSLSEGREIHAYIVKS 460

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
               +  +  SL+ MY     L++A++ F+++  +++V+WNS+I  Y   G    +  + 
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLF 520

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQ 680
           ++M    + P+  ++ SL++  SI G   E       MK   GI P +  +  ++    +
Sbjct: 521 SEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGR 580

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
             N+  + +F  +M      P +    SLL  
Sbjct: 581 TGNFSAAKRFLEEMP---FVPTARIWGSLLNA 609



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 167/317 (52%), Gaps = 17/317 (5%)

Query: 202 NKFRCLSSVKS-KHAQMIKMGK----------IWNSDDMV-KSLIFHYLEFGDFTSAAKA 249
           ++F  +S++ +  H    KMGK          I   D MV  S++  Y ++G+ + A + 
Sbjct: 230 DRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 289

Query: 250 FFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
           F     R+   W+  +  Y +  G V +    + ++  +  +    I +I L   + ++ 
Sbjct: 290 FNGMIQRNIVAWNVMIGCY-ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
              G  +H   ++RGF   + L+ AL++ YG+C  ++SA  +F  +++ ++ + WN II 
Sbjct: 349 ---GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE-KNVISWNSIIA 404

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
             ++N K  +A++LF+E+  SS    S TI  +L A A+  +  EG++IH Y++KS   S
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           N  + N L+ MY+    LE A + F+ +   ++ SWNS+I +Y   G+  ++  LF++M 
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524

Query: 490 SSRIQPDIITWNCLLSG 506
           +SR+ P+  T+  LL+ 
Sbjct: 525 ASRVNPNKSTFASLLAA 541


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Glycine max]
          Length = 647

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/583 (36%), Positives = 330/583 (56%), Gaps = 40/583 (6%)

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P+ +  + +L+  T+L  LK G+  H ++L +   +DL +  SL+ MY +   L+ A+
Sbjct: 70   LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD-------------LV 634
             +FD M +R++V+W S+I+GY       +A  +  +M  +  +P+             + 
Sbjct: 130  RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189

Query: 635  SWN----------------------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
            S+N                      SLV  Y+  G   EA+++   +       N V+W 
Sbjct: 190  SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCK----NEVSWN 245

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            +LI+G  +     E+L  F++MQ+E  +P   T S+LL +C  +G L+ GK +H   +K+
Sbjct: 246  ALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS 305

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
                  YV   L+ MY+KSG+++ A +VF K     + S N M++G+A +G GKEA   F
Sbjct: 306  SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQF 365

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             E++  G +P+ ITF ++L AC ++ L++EG  YF  M   YNI P + HY+ +VDLLG+
Sbjct: 366  DEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGR 424

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG LD+A  FI  MP +P   IWGALLG+ ++H + E    A++R+F+L+P     + L+
Sbjct: 425  AGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLL 484

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + RWEDV ++R  M + GVK     SW++++  VHVF A    HP   +I+   
Sbjct: 485  ANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMW 544

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L  ++K++GYVPDT  V   +D++EK   L  H+EKLA+ + L+ T   + IR++KN 
Sbjct: 545  EKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNI 604

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCH+A KY+SLV  REI +RD  RFHHF +G CSC D W
Sbjct: 605  RVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 190/424 (44%), Gaps = 71/424 (16%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK CT+L     G  VH  ++   F  D+ ++ +L+  Y +C  +E A +LF E+    
Sbjct: 80  LLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPH-R 138

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + W  +I    +N++  +A+ LF  M    A+    T+  +++ C  + +++ G+QIH
Sbjct: 139 DMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIH 198

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
               K    SN+ V + L+ MY+R                                GY+ 
Sbjct: 199 ACCWKYGCHSNVFVGSSLVDMYAR-------------------------------CGYLG 227

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  +F+K+       + ++WN L++G+   G  +  L L   MQ  G+RP   + S +L
Sbjct: 228 EAMLVFDKLGCK----NEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALL 283

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            + + +  L+ G+  H +++++      YVG +L+ MY K+  +++A++VFD +   ++V
Sbjct: 284 SSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVV 343

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           + NS++ GY   GL    K+   Q +E                                M
Sbjct: 344 SCNSMLIGYAQHGL---GKEAAQQFDE--------------------------------M 368

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
              GI PN +T+ S+++         E   +F  M++ +I+P  +  ++++   G  GLL
Sbjct: 369 IRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLL 428

Query: 720 QNGK 723
              K
Sbjct: 429 DQAK 432



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 139/272 (51%), Gaps = 34/272 (12%)

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI--------------- 664
           +L+ ++   ++PD   +N+L+   +  G+ KE  ++  H+ NS                 
Sbjct: 61  VLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYA 120

Query: 665 ----------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
                           + ++V+WTS+I+G  QN+   ++L  F +M  +  +PN  T+SS
Sbjct: 121 RCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSS 180

Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           L++ CG +     G++IH  C K G   + +V + L+DMY++ G L  A  VF K   K 
Sbjct: 181 LVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKN 240

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-WKYF 827
             SWN +I G+A  G G+EA+ LF  +   G++P   T++ALL++C + G +E+G W + 
Sbjct: 241 EVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHA 300

Query: 828 DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             M +   ++  +   + ++ +  K+G + +A
Sbjct: 301 HLMKSSQKLVGYVG--NTLLHMYAKSGSIRDA 330



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 125/568 (22%), Positives = 228/568 (40%), Gaps = 86/568 (15%)

Query: 122 IACVGSSQLTRQNTAIVMP------KLHSIYHHFNTRTSINQNRHSHKPNSITNSPTSL- 174
           I C  SS + +    IV P          ++ H  +   +  +R+  +P+   NS T L 
Sbjct: 3   IQCERSSSVLKSLLQIVSPCKRDLGSFRRLWQHSESTFCVIDDRNLLRPS--LNSKTGLH 60

Query: 175 --------ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNS 226
                   +L P  TL       C   G     +   F  L+S   KH  +I+       
Sbjct: 61  VLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNS-NFKHDLVIQ------- 112

Query: 227 DDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELH 286
                SL+F Y   G    A + F     R    W+S +  Y        + L ++  + 
Sbjct: 113 ----NSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQ-NDRASDALLLFPRML 167

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
             G       L+ ++K C  + ++  G ++HA   K G   +V +  +L++ Y +C  + 
Sbjct: 168 SDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLG 227

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            A  +F ++   ++++ WN +I    R  + E A+ LF  MQ    +    T   +L +C
Sbjct: 228 EAMLVFDKLG-CKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSC 286

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           + +G   +GK +H +++KS+ +    V N L+ MY+++  +  A +VFD +   ++ S N
Sbjct: 287 SSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCN 346

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           SM+  Y   G    A   F++M    I+P+ IT+   LS                     
Sbjct: 347 SMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITF---LS--------------------- 382

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
                      VL A +  RLL  G+   G + +  ++  +    +++D+  +   L  A
Sbjct: 383 -----------VLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQA 431

Query: 587 QEVFDNMKNRNIVA-WNSLISGYCFKGLFVNAKKMLNQMEEE--------EIKPDLVSWN 637
           +   + M     VA W +L+           A KM    E          E+ P     +
Sbjct: 432 KSFIEEMPIEPTVAIWGALL----------GASKMHKNTEMGAYAAQRVFELDPSYPGTH 481

Query: 638 SLVSG-YSIWGQSKEALVIIHHMKNSGI 664
           +L++  Y+  G+ ++   +   MK+SG+
Sbjct: 482 TLLANIYASAGRWEDVAKVRKIMKDSGV 509


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 259/836 (30%), Positives = 422/836 (50%), Gaps = 89/836 (10%)

Query: 284  ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
            EL      F S I    L  C+  +   L V V    +K G   D+++  AL++ + +  
Sbjct: 272  ELRPTEHTFGSLITATYLSSCSLGLLDQLFVRV----LKSGCSSDLYVGSALVSAFARHG 327

Query: 344  DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
             ++ A  ++  + +  + +  N +I   ++ +  E A ++F   + S+A  +  T V +L
Sbjct: 328  MLDEAKDIYLGLKE-RNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD-TYVVLL 385

Query: 404  QACAKVG----AFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
             A A+         +G+++H +VL++  +   ++V N L++MY++   ++ A RVF  M+
Sbjct: 386  SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
              +  SWN++I++    GY + A   +  M  + I P                       
Sbjct: 446  ARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPS---------------------- 483

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
                        N +++S  L +   L LL  G++ H   ++ GL  D  V  +L+ MY 
Sbjct: 484  ------------NFAAISG-LSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYG 530

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLI-----------------SGYCFKGL------FV 615
            +   +    E+F++M   ++V+WNS++                 S     GL      FV
Sbjct: 531  ECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFV 590

Query: 616  N-------------AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
            N              K++ + M +  +  D    N+L+S Y+  G       +   M   
Sbjct: 591  NFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGR 650

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                + ++W S+ISG + N + +E++     M   +   +  T S +L  C  +  L+ G
Sbjct: 651  ---RDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERG 707

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
             E+H   L++    D  V + L+DMYSK G +  A +VF   + K   SWN MI G+A +
Sbjct: 708  MEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARH 767

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G G++A+ +F E+ E+G  PD +TF ++L+AC ++GLVE G  YF+ M  DY I+P IEH
Sbjct: 768  GLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEH 826

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH---LEYAEIASRRLF 899
            YSC++DLLG+AG LD+  ++++ MP KP+  IW  +L +C+   H   ++    ASR L 
Sbjct: 827  YSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLL 886

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +LEP N  NY L     A   RWED  + R +M    VK     SW+ +   VH F A  
Sbjct: 887  ELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGD 946

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP T EIY +L  L+ +++  GYVP T  V  D++EE K ++L  H+EKLA+ + L +
Sbjct: 947  RSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTR 1006

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + S  PIR++KN RVC DCHTA +Y+S + GR+I LRD  RFHHF++G+CSC D W
Sbjct: 1007 SSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 159/631 (25%), Positives = 266/631 (42%), Gaps = 100/631 (15%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H  ++KRG   D+ L   L+N Y K   +++A ++F  +    + + W  +I   + + 
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPG-RNAVSWTCLISGHVLSG 145

Query: 376 KWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEG--KQIHGYVLKSALESNL 431
             E+A  LFR M  +    +  S T   +L+AC   G    G   Q+HG V K+   SN 
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 205

Query: 432 SVCNCLISMYSRNN--KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           +VCN LISMY   +     LA RVFD+                                 
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVR----------------------------- 236

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ----SLGFRPN----GSSVSVVLQA 541
                 D+ITWN L+S +   G      TL R MQ     +  RP     GS ++    +
Sbjct: 237 ------DLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLS 290

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
              L LL    +    +L++G   DLYVG++L+  + ++  L  A++++  +K RN V  
Sbjct: 291 SCSLGLLD---QLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTL 347

Query: 602 NSLISGYC-----------FKGL--------------------FVNAKKMLNQMEE---- 626
           N LI+G             F G                     F  A++ L +  E    
Sbjct: 348 NGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAH 407

Query: 627 ----EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                 I   +   N LV+ Y+  G   +A  +   M+      + ++W ++I+   QN 
Sbjct: 408 VLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEAR----DRISWNTIITALDQNG 463

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               ++  +  M+Q  I P++    S L +C GLGLL  G+++HC  +K G   D  V+ 
Sbjct: 464 YCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSN 523

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK--EAILLFHELLETGF 800
            L+ MY + G +    E+F   +   + SWN  IMG          E++ +F  ++++G 
Sbjct: 524 ALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMMKSGL 582

Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            P+ +TF   LAA     ++E G K   S+   + +       + ++    K+G +D   
Sbjct: 583 VPNKVTFVNFLAALTPLSVLELG-KQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCE 641

Query: 861 DFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
                M  + DA  W +++     +GHL+ A
Sbjct: 642 RLFSRMSGRRDAISWNSMISGYIYNGHLQEA 672



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 172/741 (23%), Positives = 309/741 (41%), Gaps = 112/741 (15%)

Query: 206 CLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           C +S +S H +++K G + +   +   L+  Y +     +A + F     R+   W+  +
Sbjct: 80  CDASPESLHLEVVKRG-LTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLI 138

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLG--VEVHASLI 321
             +    G  ++   ++  +  +G   R    T   +L+ C       LG  V+VH  + 
Sbjct: 139 SGH-VLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVS 197

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVES--ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           K  F  +  +  AL++ YG C       A ++F + + + D + WN ++ V  +      
Sbjct: 198 KTEFTSNTTVCNALISMYGSCSVGPPILAQRVF-DTTPVRDLITWNALMSVYAKRGDAIC 256

Query: 380 AIKLFREMQFSSA----KAISRTIVKMLQAC----AKVGAFHEGKQIHGYVLKSALESNL 431
              LFR MQ+  +    +    T   ++ A       +G      Q+   VLKS   S+L
Sbjct: 257 TFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLL---DQLFVRVLKSGCSSDL 313

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF-NKMNS 490
            V + L+S ++R+  L+ A  ++  +K+ N  + N +I+      + + A  +F    +S
Sbjct: 314 YVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDS 373

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
           + +  D  T+  LLS                                + +  T  + L+ 
Sbjct: 374 AAVNVD--TYVVLLSA-------------------------------IAEFSTAEQGLRK 400

Query: 551 GRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS--- 606
           GRE H ++LR G  Y  + V   L++MY K   +  A  VF  M+ R+ ++WN++I+   
Sbjct: 401 GREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALD 460

Query: 607 --GYCFKGLFVNAKKMLNQ--MEEEEIKP--------------------------DLVSW 636
             GYC          M+N   M +  I P                          D V W
Sbjct: 461 QNGYC-------EAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKW 513

Query: 637 ---------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN-YRE 686
                    N+LV  Y   G+  E   I + M       +VV+W S++     ++    E
Sbjct: 514 GLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH----DVVSWNSIMGVMASSQAPITE 569

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           S++ F  M +  + PN  T  + L     L +L+ GK+IH + LK+G  +D  V   L+ 
Sbjct: 570 SVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMS 629

Query: 747 MYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            Y+KSG++ S   +F R S  +   SWN MI G+   G+ +EA+     ++ +    D  
Sbjct: 630 CYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHC 689

Query: 806 TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
           TF+ +L AC +   +E G +   +     ++   +   S +VD+  K G +D A     +
Sbjct: 690 TFSIVLNACASVAALERGME-MHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHS 748

Query: 866 MPFKPDATIWGALLGSCRIHG 886
           M  K + + W +++     HG
Sbjct: 749 MSQKNEFS-WNSMISGYARHG 768



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 224/502 (44%), Gaps = 42/502 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA +++ G I+    +   L+  Y + G    A + F L  +R    W++ +   +  G 
Sbjct: 405 HAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGY 464

Query: 274 EVQELLEVWGELHGKGVIFRSRILTII-LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
               ++     L  +  I  S    I  L  C  L     G ++H   +K G   D  + 
Sbjct: 465 CEAAMMNYC--LMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVS 522

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK-WENAIKLFREMQFSS 391
            AL+  YG+C  +    ++F+ +S   D + WN I+ V   ++     ++++F  M  S 
Sbjct: 523 NALVKMYGECGRMSECWEIFNSMS-AHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSG 581

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                 T V  L A   +     GKQIH  +LK  +  + +V N L+S Y+++       
Sbjct: 582 LVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKS------- 634

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
                                   G VD    LF++M+  R   D I+WN ++SG+  +G
Sbjct: 635 ------------------------GDVDSCERLFSRMSGRR---DAISWNSMISGYIYNG 667

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
             Q  +  +  M       +  + S+VL A   +  L+ G E H + LR+ L+ D+ V +
Sbjct: 668 HLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVES 727

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+DMY K   +  A +VF +M  +N  +WNS+ISGY   GL   A ++  +M+E    P
Sbjct: 728 ALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESP 787

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           D V++ S++S  S  G  +  L     M++ GI P +  ++ +I   L      + ++ +
Sbjct: 788 DHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVID-LLGRAGELDKIQEY 846

Query: 692 IQMQQEDIKPNSTTMSSLLQTC 713
             M++  +KPN+    ++L  C
Sbjct: 847 --MKRMPMKPNTLIWRTVLVAC 866



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 153/333 (45%), Gaps = 1/333 (0%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L++ +  H   +K G ++    +  +L+  Y E G  +   + F    +     W+S + 
Sbjct: 500 LAAGQQLHCDAVKWG-LYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMG 558

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
              S    + E ++V+  +   G++         L   T L    LG ++H+ ++K G  
Sbjct: 559 VMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVT 618

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            D  +  ALM+ Y K  DV+S  +LFS +S   D + WN +I   + N   + A+     
Sbjct: 619 EDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCL 678

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M  S       T   +L ACA V A   G ++H + L+S LES++ V + L+ MYS+  +
Sbjct: 679 MMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGR 738

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ A++VF SM   N  SWNSMIS Y   G    A  +F +M  S   PD +T+  +LS 
Sbjct: 739 IDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSA 798

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
               G  +  L     M+  G  P     S V+
Sbjct: 799 CSHAGLVERGLDYFELMEDYGILPRIEHYSCVI 831


>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
          Length = 665

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/578 (36%), Positives = 322/578 (55%), Gaps = 39/578 (6%)

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            + WN L+SGH   G ++        M          +   VL A  + + L  G + H  
Sbjct: 127  VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
            +L +G+  D  V  +L+DMY +   +  A  +F+ M+ R+                    
Sbjct: 187  VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRS-------------------- 226

Query: 618  KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                           + SW S++SG    GQ   A  +  HM       + + WT++I G
Sbjct: 227  ---------------MASWTSVISGLVRSGQVDRARDLFDHMPER----DTIAWTAMIDG 267

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             +Q   +R++L+ F  MQ   ++ +  TM S++  C  LG L+ G+       + G   D
Sbjct: 268  YVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMD 327

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             +V   LIDMYSK G+++ A +VF+   N+   +W  +I+G A+ G G+EAI +F+ +L 
Sbjct: 328  VFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLR 387

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
                PD +TF  +L AC ++GLV++G ++F SM+  YNI PT+ HY C++D+LG+AG L 
Sbjct: 388  ALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLK 447

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA D I  MP KP++TIWG LL SCR++G+ E  E+A+ RL +L+P NS  Y L+ N+ A
Sbjct: 448  EALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYA 507

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             SNRW+DV R+R  + E G+K     S I+++ I+H F A    HP   EIY +L ++++
Sbjct: 508  KSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLT 567

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            +++  GYVPD   V  ++ EEEK KVL  H+EKLA+ + L+ ++S   IR++KN R+C D
Sbjct: 568  DLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLD 627

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH A K +S + GRE+ +RD  RFHHFR G CSC D W
Sbjct: 628  CHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 211/452 (46%), Gaps = 18/452 (3%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE---VSDLEDDLLWNEIIMVKL 372
           +HA ++K G + + H   +L+  Y    D  +A  +       +     ++WN +I    
Sbjct: 78  IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHN 137

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           R+ ++E +   F +M  +SA A + T V +L AC K      G Q+H  VL+S +  +  
Sbjct: 138 RSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQR 197

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N L+ MY+    ++ A  +F+ M+  +++SW S+IS     G VD A  LF+ M    
Sbjct: 198 VENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMP--- 254

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + D I W  ++ G+   G +++ L   R MQ    R +  ++  V+ A  +L  L+ G 
Sbjct: 255 -ERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGE 313

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            +  Y+ R G+  D++VG +L+DMY K   ++ A +VF +M NR+   W ++I G    G
Sbjct: 314 WARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNG 373

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
               A  M  +M      PD V++  +++  +  G   +       M  +  I P VV +
Sbjct: 374 RGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHY 433

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             LI    +    +E+L    +M    +KPNST   +LL +C   G      EI  L  +
Sbjct: 434 GCLIDVLGRAGKLKEALDTIDKMP---MKPNSTIWGTLLASCRVYG----NSEIGELAAE 486

Query: 732 NGFIKDAYVATGLI---DMYSKSGNLKSAREV 760
                D   +T  I   +MY+KS   K  R +
Sbjct: 487 RLLELDPDNSTAYILLSNMYAKSNRWKDVRRI 518



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 30/237 (12%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF------- 352
           +L  C K     LG++VH  +++ G   D  ++ AL++ Y +C D+++A  LF       
Sbjct: 167 VLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRS 226

Query: 353 -----SEVSDL------------------EDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
                S +S L                   D + W  +I   ++  ++ +A++ FR MQ 
Sbjct: 227 MASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQI 286

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              +A   T+V ++ ACA++GA   G+    Y+ +  ++ ++ V N LI MYS+   +E 
Sbjct: 287 CKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIER 346

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           A  VF  M + +  +W ++I      G  + A  +F +M  +   PD +T+  +L+ 
Sbjct: 347 ALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTA 403



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 98/237 (41%), Gaps = 15/237 (6%)

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-----IHCLCL 730
           S S+      E++  +++M     +P++ T  SLL+                  IH   +
Sbjct: 24  SSSVSGHGAEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVV 83

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFR----KSANKTLASWNCMIMGFAIYGNGK 786
           K G   +A+ A+ LI MY+  G+  +AR V       +       WN +I G    G  +
Sbjct: 84  KFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFE 143

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            +   F +++       A+T+ ++L+AC     +  G +    +  +  ++P     + +
Sbjct: 144 LSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRV-LESGVLPDQRVENAL 202

Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
           VD+  + G +D AW     M  +  A+ W +++      G ++ A    R LF   P
Sbjct: 203 VDMYAECGDMDAAWVLFEGMQMRSMAS-WTSVISGLVRSGQVDRA----RDLFDHMP 254


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 247/866 (28%), Positives = 416/866 (48%), Gaps = 78/866 (9%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
            +L+  Y   G   +A + F+    R+   W++ +    S  G ++E L  +  +  +GV+
Sbjct: 84   ALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS-NGCMEEALVAYRRMRKEGVM 142

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
              +  L  ++ LC  L     G++V A ++  G    V +  +L+  +G  R V+ A +L
Sbjct: 143  CNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERL 202

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F  + +  D + WN +I +    E +     +  +M+    K    T+  ++  CA    
Sbjct: 203  FDRMEE-RDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDL 261

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               G  IH   + S L  ++ + N L++MYS   KL                        
Sbjct: 262  VALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL------------------------ 297

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL-TLLRGMQSLGFRP 530
                   D A SLF  M+    + D+I+WN ++S +    S    L TL + +Q+    P
Sbjct: 298  -------DEAESLFRNMS----RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPP 346

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  + S  L A +    L  GR  H  IL+  L   L +G SL+ MY K + +++ + VF
Sbjct: 347  NSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVF 406

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------------- 636
            ++M   ++V+ N L  GY       NA ++ + M    IKP+ ++               
Sbjct: 407  ESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLH 466

Query: 637  ----------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                                  NSL++ Y+  G  + +  I   + N     +V++W ++
Sbjct: 467  SYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNK----SVISWNAI 522

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I+ ++++    E++K F+  Q    K +   ++  L +   L  L+ G ++H L +KNG 
Sbjct: 523  IAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGL 582

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              D++V    +DMY K G +    +     A++    WN +I G+A YG  KEA   F  
Sbjct: 583  DCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKH 642

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            ++  G +PD +TF ALL+AC ++GL+++G  Y++SM+  + + P I+H  C+VDLLG+ G
Sbjct: 643  MVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLG 702

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
               EA  FI  MP  P+  IW +LL S R H +L+    A++ L +L+P + + Y L+ N
Sbjct: 703  KFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSN 762

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            L A + RW DV++LR  M  + +      SW+++   V  F      H    +IY +L  
Sbjct: 763  LYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDE 822

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            ++ +++++GYV DT     D DEE+K   L +H+EKLA+ YGL+     + IR+ KN RV
Sbjct: 823  ILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRV 882

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGAR 1060
            C+DCH   K +S+V  REI LRD  R
Sbjct: 883  CADCHLVFKLVSMVFHREIVLRDPYR 908



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 148/616 (24%), Positives = 272/616 (44%), Gaps = 77/616 (12%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA   + G   +V++  AL++ YG    V +A +LF E+    + + W  I++   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQ-RNVVSWTAIMVALS 121

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N   E A+  +R M+       +  +  ++  C  +     G Q+  +V+ S L +++S
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS 181

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N LI+M+    +++ A R+FD M++ +  SWN+MIS Y+        + + + M    
Sbjct: 182 VANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGE 241

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++PD+ T   L+S                                         L+  G 
Sbjct: 242 VKPDVTTLCSLVS-----------------------------------VCASSDLVALGS 266

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H   + +GL   + +  +L++MY     L  A+ +F NM  R++++WN++IS Y    
Sbjct: 267 GIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSN 326

Query: 613 LFVNAKKMLNQ-MEEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMKNSGIYP 666
             V A + L Q ++ +E  P+ ++++S +   S     + G++  A+++   ++N  +  
Sbjct: 327 SCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIG 386

Query: 667 N--------------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
           N                          VV+   L  G    E+   +++ F  M+   IK
Sbjct: 387 NSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIK 446

Query: 701 PNSTTMSSLLQTCGGLGLLQN-GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           PN  TM +L  TC  LG L + G  +H    + G + D Y+   LI MY+  G+L+S+  
Sbjct: 447 PNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTG 506

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           +F +  NK++ SWN +I     +G G+EAI LF +    G + D       L++  N   
Sbjct: 507 IFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLAS 566

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWG 876
           +EEG +    +S    +       +  +D+ GK G +D     ++T+P    +P    W 
Sbjct: 567 LEEGMQ-LHGLSVKNGLDCDSHVVNATMDMYGKCGKMD---CMLKTLPDPAHRP-TQCWN 621

Query: 877 ALLGSCRIHGHLEYAE 892
            L+     +G+ + AE
Sbjct: 622 TLISGYARYGYFKEAE 637



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 162/364 (44%), Gaps = 43/364 (11%)

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES---- 554
           +W   +SG    G      TLLR M+      +G +++ ++ A  E R  + G       
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTAC-EHRGWQEGAACGAAI 66

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H    R GL  ++Y+GT+L+ +Y     + NAQ +F  M  RN+V+W +++      G  
Sbjct: 67  HALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCM 126

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE---ALVIIHHMKNSGIYPNV--- 668
             A     +M +E +   + + N+L +  S+ G  ++    L +  H+  SG+  +V   
Sbjct: 127 EEALVAYRRMRKEGV---MCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVA 183

Query: 669 ----------------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
                                       ++W ++IS     E Y +       M+  ++K
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           P+ TT+ SL+  C    L+  G  IH LC+ +G      +   L++MYS +G L  A  +
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESL 303

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFTALLAACKNSGL 819
           FR  + + + SWN MI  +    +  EA+    +LL+T    P+++TF++ L AC +   
Sbjct: 304 FRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEA 363

Query: 820 VEEG 823
           +  G
Sbjct: 364 LMNG 367



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 132/323 (40%), Gaps = 36/323 (11%)

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--YSIWGQSK 650
           M +R   +W + +SG    GL   A  +L  M E ++     +  SLV+   +  W +  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 651 EALVIIHHMKNSG-----IY---------------------------PNVVTWTSLISGS 678
                IH + +       +Y                            NVV+WT+++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
             N    E+L  + +M++E +  N+  +++++  CG L     G ++    + +G +   
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            VA  LI M+     ++ A  +F +   +   SWN MI  ++      +  ++  ++   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
             +PD  T  +L++ C +S LV  G     S+     +  ++   + +V++   AG LDE
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALG-SGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 859 AWDFIRTMPFKPDATIWGALLGS 881
           A    R M  + D   W  ++ S
Sbjct: 300 AESLFRNMS-RRDVISWNTMISS 321



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 5/260 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA + + G + + + +  SLI  Y   GD  S+   F    ++S   W++ +       G
Sbjct: 473 HAYVTQTG-LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRH-G 530

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
             +E ++++ +    G       L   L     L +   G+++H   +K G D D H+  
Sbjct: 531 RGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVN 590

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A M+ YGKC  ++   K   + +       WN +I    R   ++ A   F+ M     K
Sbjct: 591 ATMDMYGKCGKMDCMLKTLPDPAHRPTQ-CWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATR 452
               T V +L AC+  G   +G   +  +  +  +   +  C C++ +  R  K   A +
Sbjct: 650 PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEK 709

Query: 453 VFDSMKD-HNLSSWNSMISS 471
             D M    N   W S++SS
Sbjct: 710 FIDEMPVLPNDLIWRSLLSS 729


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 234/737 (31%), Positives = 370/737 (50%), Gaps = 115/737 (15%)

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
            +H   +K+     L+  N L+++Y+++N +  A ++FD +   N                
Sbjct: 311  LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQ-------------- 356

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
                                 TW  L+SG    GS + V  L R MQ+ G  PN  ++S 
Sbjct: 357  ---------------------TWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSS 395

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN-- 595
            VL+  +    L+ G+  H ++LRNG+D D+ +G S++D+Y+K    + A+ +F+ M    
Sbjct: 396  VLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGD 455

Query: 596  -----------------------------RNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
                                         +++V+WN+++ G    G   +A + L  M E
Sbjct: 456  VVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVE 515

Query: 627  EEIKPDLVSWN-----------------------------------SLVSGYSIWGQSKE 651
               +   V+++                                   SLV  Y   G+  +
Sbjct: 516  CGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDK 575

Query: 652  ALVIIHHMK-------NSGIY-----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            A +I+  +        N+ +        +V+W S++SG + N  Y + LK F  M +E +
Sbjct: 576  ASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELV 635

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
              +  T+++++  C   G+L+ G+ +H    K G   DAYV + LIDMYSKSG+L  A  
Sbjct: 636  VVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWM 695

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VFR+S    +  W  MI G+A++G G  AI LF E+L  G  P+ +TF  +L AC ++GL
Sbjct: 696  VFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGL 755

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            +EEG +YF  M   Y I P +EH + MVDL G+AG+L +  +FI         ++W + L
Sbjct: 756  IEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFL 815

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             SCR+H ++E  +  S  L ++ P +   Y L+ N+ A ++RW++  R+R  M + GVK 
Sbjct: 816  SSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKK 875

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
                SWIQ+   +H F      HP   EIY  L  L+  +K++GY  D + V QD+ EEE
Sbjct: 876  QPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDV-EEE 934

Query: 1000 KGKVLLSH-TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            +G+VL+SH +EKLA+V+G++ T +R PIR+IKN R+C+DCH   KY S +  REI +RD 
Sbjct: 935  QGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDI 994

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFHHF+ G CSC D W
Sbjct: 995  HRFHHFKHGSCSCGDYW 1011



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 219/494 (44%), Gaps = 54/494 (10%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA  +K G +  + +    L+  Y +  +   A K F     R+   W+  +  +    G
Sbjct: 312 HALYVKNGSL-QTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFAR-AG 369

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
             + +  ++ E+  KG       L+ +LK C+      LG  VHA +++ G D DV L  
Sbjct: 370 SSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGN 429

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           ++++ Y KC+  E A +LF E+ +  D + WN +I   LR    E ++ +FR + +    
Sbjct: 430 SILDLYLKCKVFEYAERLF-ELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVV 488

Query: 394 AISRTIVKMLQACAKVGAFHE-------------------------------GKQIHGYV 422
           + +  +  +LQ   +  A  +                               G+Q+HG V
Sbjct: 489 SWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMV 548

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
           LK   +S+  + + L+ MY +  +++ A+ +   +    L   N+ +S            
Sbjct: 549 LKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSY----------- 597

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
                      +  I++W  ++SG+  +G Y++ L   R M       +  +V+ ++ A 
Sbjct: 598 --------KEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC 649

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
               +L++GR  H Y+ + G   D YVG+SL+DMY K+  L +A  VF      NIV W 
Sbjct: 650 ANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWT 709

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
           S+ISGY   G  ++A  +  +M  + I P+ V++  +++  S  G  +E       MK++
Sbjct: 710 SMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDA 769

Query: 663 -GIYPNVVTWTSLI 675
             I P V   TS++
Sbjct: 770 YCINPGVEHCTSMV 783


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 247/793 (31%), Positives = 382/793 (48%), Gaps = 134/793 (16%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN++I   L       A++LFR M+         T   + +AC ++  F  G  IHG V+
Sbjct: 94   WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            +   ESN+ VCN +ISMY +   +  A +VFD +              Y G+        
Sbjct: 154  RLGFESNVFVCNAVISMYGKCKAVVHARKVFDEL-------------CYRGIC------- 193

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV-LTLLRGMQ-SLGFRPNGSSVSVVLQA 541
                        D +TWN ++S  ++H    NV ++L R M    G  P+   V  +L  
Sbjct: 194  ------------DSVTWNSIVSV-YSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPV 240

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
               L L   GR+ HG+ +R+GL  D++VG +L+DMY K   +++A +VF+ M+ +++V W
Sbjct: 241  CGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTW 300

Query: 602  N-----------------------------------SLISGYCFKGLFVNAKKMLNQMEE 626
            N                                   S+ISGY  +G    A  +  QM  
Sbjct: 301  NAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCG 360

Query: 627  EEIKPDLVSWNSLVSGYSIWG----------------------QSKEALVIIHHMKN--- 661
               +P++V+  SL+S  +  G                         + L +I+ + +   
Sbjct: 361  CRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYA 420

Query: 662  ------------SGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNST 704
                          I P   +VVTWT +I G  Q+ +   +L+ F +M + D  I PN  
Sbjct: 421  KCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDF 480

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD--AYVATGLIDMYSKSGNLKSAREVFR 762
            T+S +L  C  L  L+ GK+IH   L+   I     +VA  LIDMYSKSG++ +A+ VF 
Sbjct: 481  TISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFD 540

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
              + +   SW  ++ G+ ++G  ++A  +F E+ +     D ITF  +L AC +SG+   
Sbjct: 541  SMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM--- 597

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
                      D+ + P +EHY+CMVDLLG+AG L EA   I  MP +P   +W ALL +C
Sbjct: 598  ----------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSAC 647

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIH + E AE A+++L +L+  N   Y L+ N+ A + RW+DV R+ + M   G+K +  
Sbjct: 648  RIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPG 707

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
            WSW++  + +  F      H  + +IY  L  L+  +K             D+D+EEKG 
Sbjct: 708  WSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIK-------ANFSLHDVDDEEKGD 760

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLA+ Y ++     APIR+ KN R+C D H+A  Y+S++   EI LRD +RFH
Sbjct: 761  QLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFH 820

Query: 1063 HFREGECSCNDCW 1075
             F+ G CSC   W
Sbjct: 821  QFKNGSCSCKGYW 833



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 169/664 (25%), Positives = 291/664 (43%), Gaps = 79/664 (11%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---W 261
           + L+  K  H Q I  G + NS   V +LI+ Y+     T+A        + S++    W
Sbjct: 35  KTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWW 94

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           +  +     F       L ++  +              + K C ++  F LG  +H  +I
Sbjct: 95  NQLIRHALHFNSP-NTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV--SDLEDDLLWNEIIMVKLRNEKWEN 379
           + GF+ +V +  A+++ YGKC+ V  A K+F E+    + D + WN I+ V         
Sbjct: 154 RLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNV 213

Query: 380 AIKLFREMQFSSAKAISRT-IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
           A+ LFREM            +V +L  C  +G    G+Q+HG+ ++S L  ++ V N L+
Sbjct: 214 AVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALV 273

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY++  K+E A +VF+ M+  ++ +WN+M++ Y+  G  + A SLF KM   +I+ D++
Sbjct: 274 DMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVV 333

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
           TW+ ++SG+   G     + + R M     RPN  ++  +L A   +  L +G+E+H Y 
Sbjct: 334 TWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYS 393

Query: 559 LR-------NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGYC 609
           ++       N    DL V  +L+DMY K   L+ A+ +FD +  K+R++V W  +I GY 
Sbjct: 394 VKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYA 453

Query: 610 FKGLFVNAKKMLNQM--------------------------------------EEEEIKP 631
             G   +A ++ ++M                                          I  
Sbjct: 454 QHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDS 513

Query: 632 D-LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
           D L   N L+  YS  G    A V+   M       N V+WTSL++G   +    ++ + 
Sbjct: 514 DVLFVANCLIDMYSKSGDVDTAQVVFDSMSKR----NAVSWTSLLTGYGMHGRSEDAFRV 569

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGL---LQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           F +M++E +  +  T   +L  C   G+   +  G E H  C              ++D+
Sbjct: 570 FDEMRKEALVLDGITFLVVLYACSHSGMDFGVDPGVE-HYAC--------------MVDL 614

Query: 748 YSKSGNLKSA-REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
             ++G L  A R +       T   W  ++    I+ N + A     +LLE     D  T
Sbjct: 615 LGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDG-T 673

Query: 807 FTAL 810
           +T L
Sbjct: 674 YTLL 677


>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1221

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/584 (35%), Positives = 340/584 (58%), Gaps = 13/584 (2%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGR 552
            +PD   +N L+ G+       N + +   M   GF  P+  S + V++A    R L+ G 
Sbjct: 234  EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGF 293

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H   L++GLD  L+V T+L+ MY +  C+  A++VFD M   N+VAWN++++  CF+G
Sbjct: 294  QMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTA-CFRG 352

Query: 613  LFVN-AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
              V+ A+++ ++M    +  +  SWN +++GY   G+ + A  I   M +     + V+W
Sbjct: 353  NDVSGAREIFDKM----LVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHR----DDVSW 404

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            +++I G   N ++ ES  +F ++ + +++PN  +++ +L  C   G  + GK +H    K
Sbjct: 405  STMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEK 464

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAIL 790
            +G+     V   LIDMYS+ GN+  AR VF     K ++ SW  MI G A++G+G+EAI 
Sbjct: 465  SGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIR 524

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            +F+E+ E+G  PD I+F +LL AC ++GL++EG  YF  M   Y+I P +EHY CMVDL 
Sbjct: 525  IFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLY 584

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G++G L +A+ FI  MP  P A +W  LLG+C  HG++E AE   +RL +L+P NS +  
Sbjct: 585  GRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 644

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A + +W+DV  +R SM    +K +  WS +++ + ++ F+A         E + 
Sbjct: 645  LLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEIDIEAHE 704

Query: 971  ELYHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
            +L  ++  ++ + GY P+      D++EEEK   +  H+EKLA+ + L +    A IR++
Sbjct: 705  KLKEIILRLRDEAGYAPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLPKGANIRIV 764

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            KN R+C DCH   K  S V G EI +RD  RFH F++G CSC D
Sbjct: 765  KNLRICRDCHAVMKLTSRVYGVEIVIRDRNRFHSFKDGSCSCGD 808



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 206/469 (43%), Gaps = 65/469 (13%)

Query: 302 KLCTKLMAFWLGVEVHASLIKRGFDFDVH------LKCALMNFYGKCRDVESANKL---F 352
           + C  L A     ++H   IK G D D +      L CA+         +  A +L   F
Sbjct: 180 QYCKNLRAL---TQIHGFFIKSGVDTDSYFIGKLILHCAI----SISDALPYARRLLLCF 232

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ---FSSAKAISRTIVKMLQACAKV 409
            E     D  ++N ++     +++  N++ +F EM    F    + S   V  ++A A  
Sbjct: 233 PE----PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFV--VKAAANF 286

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS-- 467
            +   G Q+H   LK  L+S+L V   LI MY     +  A +VFD M   NL +WN+  
Sbjct: 287 RSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVV 346

Query: 468 -----------------------------MISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
                                        M++ Y   G ++ A  +F++M       D +
Sbjct: 347 TACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMP----HRDDV 402

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
           +W+ ++ G   +GS+    +  R +     RPN  S++ VL A ++    ++G+  HG++
Sbjct: 403 SWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFV 462

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNA 617
            ++G  + + V  +L+DMY +   +  A+ VF+ M+  R+IV+W S+I+G    G    A
Sbjct: 463 EKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEA 522

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLIS 676
            ++ N+M E  + PD +S+ SL+   S  G  KE       MK    I P V  +  ++ 
Sbjct: 523 IRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVD 582

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
              ++   +++  F  QM    I P +    +LL  C   G ++  +++
Sbjct: 583 LYGRSGKLQKAYSFICQMP---IPPTAIVWRTLLGACSSHGNIELAEQV 628



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 140/362 (38%), Gaps = 65/362 (17%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L ++   H   IK G   +S  + K ++   +   D    A+   L F    A   + L 
Sbjct: 185 LRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 244

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGF 325
              S   E    + V+ E+  KG IF        ++K      +   G ++H   +K G 
Sbjct: 245 RGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGL 304

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           D  + +   L+  YG+C  V  A K+F E+    + + WN ++    R      A ++F 
Sbjct: 305 DSHLFVATTLIGMYGECGCVGFARKVFDEMPQ-PNLVAWNAVVTACFRGNDVSGAREIFD 363

Query: 386 EMQFSSAKAISRTIVKMLQA----CAK------------------VGAFHEG-------- 415
           +M   +  + +  +   ++A    CAK                  VG  H G        
Sbjct: 364 KMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSY 423

Query: 416 --------------------------------KQIHGYVLKSALESNLSVCNCLISMYSR 443
                                           K +HG+V KS     +SV N LI MYSR
Sbjct: 424 FRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSR 483

Query: 444 NNKLELATRVFDSMKD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
              + +A  VF+ M++  ++ SW SMI+     G+ + A  +FN+M  S + PD I++  
Sbjct: 484 CGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFIS 543

Query: 503 LL 504
           LL
Sbjct: 544 LL 545



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 130/293 (44%), Gaps = 12/293 (4%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y++ G+   A + F     R    WS+ +  + S  G   E    + EL    +      
Sbjct: 380 YIKAGELECAKRIFSEMPHRDDVSWSTMIVGF-SHNGSFNESFSYFRELLRAEMRPNEVS 438

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +L  C++  AF  G  +H  + K G+ + V +  AL++ Y +C +V  A  +F  + 
Sbjct: 439 LTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 498

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +    + W  +I     +   E AI++F EM  S       + + +L AC+  G   EG+
Sbjct: 499 EKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGE 558

Query: 417 QIHGYVLKSA----LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS-SWNSMISS 471
              GY  K      +E  +    C++ +Y R+ KL+ A      M     +  W +++ +
Sbjct: 559 ---GYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGA 615

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGM 523
            +  G +++A  +  ++N   + P+      LLS  + T G +++V ++ + M
Sbjct: 616 CSSHGNIELAEQVKQRLN--ELDPNNSGDLVLLSNVYATAGKWKDVASIRKSM 666


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/583 (36%), Positives = 323/583 (55%), Gaps = 41/583 (7%)

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P  +  S +L   T LR LK GR  H +I  +  + DL +   +++MY K   L+ AQ
Sbjct: 101  LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG----- 642
            ++FD M  +++V+W  LISGY   G    A  +  +M     +P+  + +SL+       
Sbjct: 161  DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 643  ------------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                                          Y+ W   +EA VI     NS    NVV+W 
Sbjct: 221  SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIF----NSLAAKNVVSWN 276

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            +LI+G  +       ++ F QM ++  +P   T SS+L  C   G L+ GK +H   +K+
Sbjct: 277  ALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKS 335

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            G    AY+   LIDMY+KSG++K A++VFR+   + + SWN +I G+A +G G EA+ LF
Sbjct: 336  GGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLF 395

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             ++L+   QP+ ITF ++L AC +SGL++EG  YF+ M   + I   + H+  +VDLLG+
Sbjct: 396  EQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGR 454

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG L+EA  FI  MP KP A +WGALLG+CR+H +++    A+ ++F+L+P +S  + L+
Sbjct: 455  AGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLL 514

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A + R  D  ++R  M E GVK     SW++I+  VHVF A    HP   EI    
Sbjct: 515  SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMW 574

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              +  ++K++GYVPDT  V   ++++++   L  H+EKLA+ + ++KT     IR+ KN 
Sbjct: 575  EKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 634

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH+A K+ S V GREI +RD  RFHHF  G CSC D W
Sbjct: 635  RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 193/428 (45%), Gaps = 66/428 (15%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           KML  C  +    +G+ IH ++  S  E +L + N +++MY++   LE A  +FD M   
Sbjct: 110 KMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTK 169

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           ++ SW  +IS Y+  G    A +LF KM                                
Sbjct: 170 DMVSWTVLISGYSQSGQASEALALFPKM-------------------------------- 197

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
                LGF+PN  ++S +L+A        +GR+ H + L+ G D +++VG+SL+DMY + 
Sbjct: 198 ---LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARW 254

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             ++ A+ +F+++  +N+V+WN+LI+G+  KG   +  ++  QM  +  +P   +++S++
Sbjct: 255 AHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL 314

Query: 641 SGYSIWGQSKEALVIIHHMKNSG------------------------------IYPNVVT 670
           +  S     +   V  H +K+ G                              +  ++V+
Sbjct: 315 ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVS 374

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           W S+ISG  Q+    E+L+ F QM +  ++PN  T  S+L  C   GLL  G+    L  
Sbjct: 375 WNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK 434

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAI 789
           K+           ++D+  ++G L  A +   +   K T A W  ++    ++ N    +
Sbjct: 435 KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGV 494

Query: 790 LLFHELLE 797
               ++ E
Sbjct: 495 YAAEQIFE 502



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 193/414 (46%), Gaps = 40/414 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  CT L     G  +HA +    F+ D+ L   ++N Y KC  +E A  LF ++   +
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT-K 169

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + W  +I    ++ +   A+ LF +M     +    T+  +L+A     + H G+Q+H
Sbjct: 170 DMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLH 229

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            + LK   + N+ V + L+ MY+R   +  A  +F+S+   N                  
Sbjct: 230 AFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN------------------ 271

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            +++WN L++GH   G  ++V+ L   M   GF P   + S VL
Sbjct: 272 -----------------VVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL 314

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A      L+ G+  H +++++G     Y+G +L+DMY K+  +++A++VF  +  ++IV
Sbjct: 315 -ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIV 373

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +WNS+ISGY   GL   A ++  QM + +++P+ +++ S+++  S  G   E       M
Sbjct: 374 SWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM 433

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           K   I   V    +++    +     E+ KF  +M    IKP +    +LL  C
Sbjct: 434 KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM---PIKPTAAVWGALLGAC 484


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/590 (36%), Positives = 323/590 (54%), Gaps = 41/590 (6%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M  LG          +L      R ++ G+  H ++++      +Y+ T L+ +Y K DC
Sbjct: 53   MAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDC 112

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------ 636
            L +A+ +FD M  RN+V+W ++IS Y  +G    A  +  +M   + +P+  ++      
Sbjct: 113  LGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTS 172

Query: 637  -----------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                         +SL+  Y+  G+  +A  + H +       +
Sbjct: 173  CYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER----D 228

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            VV  T++ISG  Q     E+LK F Q+Q E +  NS T +S+L    GL  L +GK++H 
Sbjct: 229  VVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHS 288

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              L++G      +   LIDMYSK GN+  AR +F     +T  SWN M++G++ +G  +E
Sbjct: 289  HVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMARE 348

Query: 788  AILLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN-IIPTIEHYSC 845
             + LF  + E    +PD+IT+ A+L+ C +  L + G + F +M    + I P I HY C
Sbjct: 349  VLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGC 408

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
            +VDLLG+AG ++EA+DFI+ MPF P A IWG+LLGSCR+H  +E   I  ++L +LEP N
Sbjct: 409  VVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPEN 468

Query: 906  SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
            + NY ++ NL A + +WED+  +R  M E  V      SW+++DQIVH F A    HP  
Sbjct: 469  AGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRR 528

Query: 966  GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
             E+  ++  L  + K+ GYVPD  CV  D+DEE+K KVLL H+EKLA+ +GL+ T     
Sbjct: 529  EEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTT 588

Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            IRVIKN R+C DCH+ AK++S +  R + LRD  RFH+   G CSC D W
Sbjct: 589  IRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 187/417 (44%), Gaps = 42/417 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL  C    A   G  VH  +IK  +   V+L+  L+  Y KC  +  A  +F E+    
Sbjct: 68  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQ-R 126

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +I    +      A+ LF EM  S  +    T   +L +C     F  G+QIH
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              +K   ES++ V + L+ MY+++ ++  A  VF  + + ++ +  ++IS Y  +G  +
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 246

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  LF                                   R +Q  G   N  + + VL
Sbjct: 247 EALKLF-----------------------------------RQLQIEGMNSNSVTYASVL 271

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A++ L  L +G++ H ++LR+G    + +  SL+DMY K   +  A+ +FD+M  R  +
Sbjct: 272 TALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCI 331

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           +WN+++ GY   G+     ++   M EE ++KPD +++ +++SG S        L I ++
Sbjct: 332 SWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYN 391

Query: 659 MKN--SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           M N   GI P++  +  ++    +     E+  F  +M      P +    SLL +C
Sbjct: 392 MVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMP---FVPTAAIWGSLLGSC 445



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 205/450 (45%), Gaps = 77/450 (17%)

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           L RE++F    +I       L  C    A  EG+++H +++K+    ++ +   LI +Y+
Sbjct: 56  LGREVKFEGYDSI-------LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYN 108

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           + + L  A  +FD M   N+ SW +MIS+Y+  G+   A +LF +M  S  +P+      
Sbjct: 109 KCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPN------ 162

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
               HFT   +  +LT   G  SLGF                    + GR+ H   ++  
Sbjct: 163 ----HFT---FATILTSCYG--SLGF--------------------ETGRQIHSIAIKRN 193

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            +  ++VG+SL+DMY K+  + +A  VF  +  R++VA  ++ISGY   GL   A K+  
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV------------- 669
           Q++ E +  + V++ S+++  S          +  H+  SG Y  VV             
Sbjct: 254 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 313

Query: 670 ------------------TWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLL 710
                             +W +++ G  ++   RE L+ F  M++E+ +KP+S T  ++L
Sbjct: 314 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 373

Query: 711 QTCGGLGLLQNGKEI--HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NK 767
             C    L   G EI  + +  K+G   D      ++D+  ++G ++ A +  +K     
Sbjct: 374 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 433

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           T A W  ++    ++ + +  I++  +LLE
Sbjct: 434 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLE 463



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 148/321 (46%), Gaps = 5/321 (1%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            LNE    R +   +  H  MIK   +  S  +   LI  Y +      A   F     R
Sbjct: 68  ILNECVSQRAIREGQRVHTHMIKTCYL-PSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +   W++ +  Y   G    E L ++ E+              IL  C   + F  G ++
Sbjct: 127 NVVSWTAMISAYSQRGFAF-EALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQI 185

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H+  IKR ++  + +  +L++ Y K   +  A+ +F  + +  D +    II    +   
Sbjct: 186 HSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE-RDVVACTAIISGYAQMGL 244

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            E A+KLFR++Q     + S T   +L A + + A + GKQ+H +VL+S   S + + N 
Sbjct: 245 DEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNS 304

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-SSRIQP 495
           LI MYS+   +  A R+FDSM +    SWN+M+  Y+  G       LF  M   ++++P
Sbjct: 305 LIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 364

Query: 496 DIITWNCLLSGHFTHGSYQNV 516
           D IT+  +LSG  +HG  +++
Sbjct: 365 DSITYLAVLSG-CSHGQLEDM 384


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/739 (30%), Positives = 356/739 (48%), Gaps = 76/739 (10%)

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            +  K + A    +EM  +       +   + +AC K+ +  +G+ IH  + ++    + S
Sbjct: 64   KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            + NCL+ MY          +VFD M                                   
Sbjct: 124  IENCLLRMYCDCGSCIDVQKVFDEM----------------------------------- 148

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            +  ++++W  ++S +  +G  +  + L   MQ+ G RPN +    +LQ+      L+ G+
Sbjct: 149  LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGK 208

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H +++R  L+ ++ V T++ +MYV+   L+ A+ VFD M  +N V W  L+ GY    
Sbjct: 209  QIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWN---SLVSGYSIWGQSKE-----------------A 652
                A ++  +M  E ++ D   ++    +  G   W   ++                  
Sbjct: 269  KLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGT 328

Query: 653  LVIIHHMKNSGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             ++  ++K   I            PN V+W++LISG  Q+    + +K F  ++ E +  
Sbjct: 329  PLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVL 388

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            NS   +S+ Q C     L  G + H   +K G +   Y  + ++ MYSK G L  AR  F
Sbjct: 389  NSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAF 448

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                     +W  +I G+A +GN  EA+  F  +   G +P+A+TF A+L AC +SGLV 
Sbjct: 449  ESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVA 508

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            E  +Y  SMS DY + PTI+HY CM+D   +AG L EA + I  MPF+PDA  W +LLG 
Sbjct: 509  EAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C  H  L+  +IA+  LF+L+P ++A Y L+ NL +   +WE+   +R  M E  +K  +
Sbjct: 569  CWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEV 628

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIY-----FELYHLVSEMKKLGYVPDTRCVYQDID 996
              SWI +   VH F      HP T  IY     F+   + S ++ L    D  C      
Sbjct: 629  SCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARK 688

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            E+     LL H+EKLAI +GL+ T+  API V KN R C DCH   K +S+V GR+I +R
Sbjct: 689  EQ-----LLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVR 743

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFHHF+ G+CSCND W
Sbjct: 744  DSTRFHHFKSGKCSCNDYW 762



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/577 (25%), Positives = 247/577 (42%), Gaps = 108/577 (18%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+++E  +   E+    V         + + C KL +   G  +H  L +   +    ++
Sbjct: 66  GKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIE 125

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L+  Y  C       K+F E+  +++ + W  +I    +N + E AI+LF +MQ S  
Sbjct: 126 NCLLRMYCDCGSCIDVQKVFDEML-MKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGI 184

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +  S   + +LQ+C        GKQIH +V+++ L +N++V   + +MY R   LE A  
Sbjct: 185 RPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKL 244

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VFD M   N  +W  ++  YT    ++VA  LF +M    ++ D   +            
Sbjct: 245 VFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVF------------ 292

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                  S+VL+    L     GR+ H +I++ G + ++ VGT 
Sbjct: 293 -----------------------SIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTP 329

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY--------CFK--------GLFVN 616
           L+D YVK   +++A   F  +   N V+W++LISG+        C K        G+ +N
Sbjct: 330 LVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLN 389

Query: 617 ------------AKKMLN---QMEEEEIKPDLVSW----NSLVSGYSIWGQSKEALVIIH 657
                       A+  LN   Q   + IK  LVS+    +++V+ YS  G+   A     
Sbjct: 390 SFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFE 449

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            +      P+ V WT++ISG   + N  E+L FF +MQ   ++PN+ T  ++L  C   G
Sbjct: 450 SIDE----PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSG 505

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
           L+   K+        G +   Y     ID Y                        +CMI 
Sbjct: 506 LVAEAKQYL------GSMSRDYGVKPTIDHY------------------------DCMID 535

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            ++  G  +EA+ L + +    F+PDA+++ +LL  C
Sbjct: 536 TYSRAGLLQEALELINRM---PFEPDAMSWKSLLGGC 569



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 189/400 (47%), Gaps = 42/400 (10%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H+ +I+     N++  V++ I + Y+  G    A   F    +++   W+  +  Y 
Sbjct: 208 KQIHSHVIRAQ--LNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYT 265

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
               +++  LE++  +  +GV     + +I+LK+C  L  + +G ++H+ ++K G + +V
Sbjct: 266 Q-AKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEV 324

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +   L++FY KC D+ESA + F  +S+  +D+ W+ +I    ++ + E+ IK+F  ++ 
Sbjct: 325 SVGTPLVDFYVKCGDIESAYRSFGRISE-PNDVSWSALISGFSQSGRLEDCIKIFTSLRS 383

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                 S     + QACA     + G Q HG  +K  L S L   + +++MYS+  +L+ 
Sbjct: 384 EGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDY 443

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A R F+S+ + +  +W ++IS Y   G    A   F +M S  ++P+ +T+  +L+    
Sbjct: 444 ARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSH 503

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD-YDLY 568
            G                         +V +A   L     G  S  Y ++  +D YD  
Sbjct: 504 SG-------------------------LVAEAKQYL-----GSMSRDYGVKPTIDHYDC- 532

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISG 607
               ++D Y +   LQ A E+ + M    + ++W SL+ G
Sbjct: 533 ----MIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 234/682 (34%), Positives = 365/682 (53%), Gaps = 48/682 (7%)

Query: 435  NCLISMYSR-NNKLELATRVFDSMKDHNLSSW-------NSMISSYTGLGYVDVAWSLFN 486
            NC  S+ ++  NK  L T    S+  H L S        + +I  Y     +  A  LF+
Sbjct: 2    NCYTSLIAQFTNKKSLTT--LKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFD 59

Query: 487  KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            +M +  I    +TWN ++S H + G  +  + L   M   G  P+  + S + +A +E+ 
Sbjct: 60   EMPNRHI----VTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMG 115

Query: 547  LLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
            + + G+++HG  +  G +  D +V T ++DMY K   +++A+ VFD + ++++V + +LI
Sbjct: 116  VSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALI 175

Query: 606  SGYCFKGLFVNAKKMLNQMEEEEIKPD-------LVS---WNSLVSGYSIWG-------- 647
             GY  +GL   A ++   M    IKP+       LVS      LV+G  I G        
Sbjct: 176  VGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLE 235

Query: 648  ---QSKEALVIIH----------HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
                S+ +L+ ++           + NS  Y + VTWTS I G +QN     +L  F +M
Sbjct: 236  SVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREM 295

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
             +  I PN  T SS+L  C  L +L+ G++IH + +K G   + YV   LI +Y K GN+
Sbjct: 296  IRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNV 355

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            + AR VF       + S N MI  +A  G G EA+ LF  + + G +P+ +TF ++L AC
Sbjct: 356  EKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLAC 415

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
             N+GLVEEG + F  +  +++I  T +HY+CM+DLLG+A   +EA   I      PD   
Sbjct: 416  NNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQ 474

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            W  LL +C+IHG +E AE   +++    P +   + L+ N+ A + +W++V  ++ +  +
Sbjct: 475  WRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRD 534

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
            + +K     SW+ ID+ VH F A    HP   EI   L+ L+ ++  LGY PDT+ V QD
Sbjct: 535  LRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQD 594

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSR-APIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            ++EE+K   L  H+EKLAI + L KT  +   IR+ KN RVC DCH+  K++SL+ GR+I
Sbjct: 595  LEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDI 654

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
              RD  RFHHF+ G CSC D W
Sbjct: 655  IARDAKRFHHFKGGICSCKDYW 676



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 146/623 (23%), Positives = 283/623 (45%), Gaps = 67/623 (10%)

Query: 201 TNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD 260
           TNK + L+++KS H  ++K G +++       LI  Y++    T A K F    +R    
Sbjct: 12  TNK-KSLTTLKSLHTHILKSGSLFSF--FGHKLIDGYIKCSVITEARKLFDEMPNRHIVT 68

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +  + S  G+ +E +E++  +  +GV+  +   + I K  +++     G + H   
Sbjct: 69  WNSMISSHVS-RGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLA 127

Query: 321 IKRGFDF-DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           +  GF+  D  +   +++ Y K   ++ A  +F  V D +D +L+  +I+   +      
Sbjct: 128 VVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLD-KDVVLFTALIVGYNQRGLDGE 186

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A+++F +M  S  K    T+  +L +C  +G    GK IHG V+KS LES ++    L++
Sbjct: 187 ALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLT 246

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MYS+ N +E + +VF+S+   +  +W S I      G  ++A S+F +M    I P+   
Sbjct: 247 MYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPN--- 303

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
                  HFT  S                         +L A + L +L+ G + H   +
Sbjct: 304 -------HFTFSS-------------------------ILHACSSLAMLEAGEQIHAVTV 331

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           + G+D + YV  +L+ +Y K   ++ A+ VF+++   ++V+ N++I  Y   G    A +
Sbjct: 332 KLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALE 391

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGS 678
           +  +M++   KP++V++ S++   +  G  +E   I   ++N+  I      +T +I   
Sbjct: 392 LFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLL 451

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            + + + E+      + +E   P+     +LL  C   G ++  ++     L     +D 
Sbjct: 452 GRAKRFEEA----AMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQA-PRDG 506

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTL-------ASW-------NCMIMGFAIYGN 784
                L ++Y+ +G   +  E+  KSA + L        SW       +  + G   +  
Sbjct: 507 GTHILLTNIYASAGKWDNVIEM--KSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPR 564

Query: 785 GKEAILLFHELLET----GFQPD 803
             E   + HEL+E     G+ PD
Sbjct: 565 AHEISEMLHELIEKVITLGYNPD 587


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/718 (33%), Positives = 374/718 (52%), Gaps = 67/718 (9%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           CT + +   G ++H  ++K     D+ L+  ++N YGKC  ++ A K F +   L + + 
Sbjct: 167 CTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAF-DTMQLRNVVS 225

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I    +N +  +AI ++ +M  S       T   +++AC   G    G+Q+HG+V+
Sbjct: 226 WTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVI 285

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           KS  + +L   N LISMY+R  ++  A+ VF  +   +L SW SMI+ +T LGY   A  
Sbjct: 286 KSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 345

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           LF  M                   F  G YQ               PN      V  A  
Sbjct: 346 LFRDM-------------------FRQGFYQ---------------PNEFIFGSVFSACR 371

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            L   ++GR+ HG   + GL  +++ G SL DMY K   L +A   F  +++ ++V+WN+
Sbjct: 372 SLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNA 431

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------VSGYSI-WG 647
           +I+ +   G    A     QM    + PD +++ SL               +  Y I  G
Sbjct: 432 IIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIG 491

Query: 648 QSKEALV----IIHHMKNSGIY------------PNVVTWTSLISGSLQNENYRESLKFF 691
             KEA V    +  + K S ++             N+V+W +++S  LQ++   E  + F
Sbjct: 492 LDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLF 551

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             M   + KP++ T++++L TC  L  L+ G ++HC  +K+G + D  V+  LIDMY+K 
Sbjct: 552 KLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKC 611

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G+LK AR+VF  + N  + SW+ +I+G+A +G G EA+ LF  +   G QP+ +T+  +L
Sbjct: 612 GSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVL 671

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
           +AC + GLVEEGW ++++M  +  I PT EH SCMVDLL +AG L EA +FI+ M F PD
Sbjct: 672 SACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPD 731

Query: 872 ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            T+W  LL SC+ HG+++ AE A+  + KL+P NSA   L+ N+ A    W++V RLR+ 
Sbjct: 732 ITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNL 791

Query: 932 MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
           M ++GV+ V   SWI +   +HVF +E   H   G+IY  L  L  +M   GY P  R
Sbjct: 792 MKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDPCQR 849



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 69/455 (15%)

Query: 502 CLLSGH---FTHGSYQNVLTLLR----GMQSLGFRPNGSSVSV-------VLQAVTELRL 547
           CL+  H    +  SY N++   R     + +  F P  SS+ +       ++ A T +R 
Sbjct: 113 CLIKQHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRS 172

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           LKYG++ H +IL++    DL +   +++MY K   L++A++ FD M+ RN+V+W  +ISG
Sbjct: 173 LKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISG 232

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPD----------------------------------- 632
           Y   G   +A  M  QM +    PD                                   
Sbjct: 233 YSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHH 292

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
           L++ N+L+S Y+ +GQ   A  +   +       ++++W S+I+G  Q     E+L  F 
Sbjct: 293 LIAQNALISMYTRFGQIVHASDVFTMISTK----DLISWASMITGFTQLGYEIEALYLFR 348

Query: 693 QM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
            M +Q   +PN     S+   C  L   + G++IH +C K G  ++ +    L DMY+K 
Sbjct: 349 DMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKF 408

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G L SA   F +  +  L SWN +I  F+  G+  EAI  F +++ TG  PD ITF +LL
Sbjct: 409 GFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLL 468

Query: 812 AACKNSGLVEEGWK---YFDSMSTDYNIIPTIEHYSC--MVDLLGKAGYLDEAWDFIRTM 866
            AC +   + +G +   Y   +  D       E   C  ++ +  K   L +A++  + +
Sbjct: 469 CACGSPVTINQGTQIHSYIIKIGLDK------EAAVCNSLLTMYTKCSNLHDAFNVFKDV 522

Query: 867 PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
               +   W A+L +C    H +  E+   RLFKL
Sbjct: 523 SENANLVSWNAILSACL--QHKQAGEVF--RLFKL 553



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 216/485 (44%), Gaps = 43/485 (8%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y  FG    A+  F +  ++    W+S +  +   G E+ E L ++ ++  +G  
Sbjct: 298 ALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEI-EALYLFRDMFRQGFY 356

Query: 292 FRSR-ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
             +  I   +   C  L+    G ++H    K G   +V   C+L + Y K   + SA +
Sbjct: 357 QPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIR 416

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
            F ++    D + WN II     +     AI  F +M  +       T + +L AC    
Sbjct: 417 AFYQIES-PDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPV 475

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF-DSMKDHNLSSWNSMI 469
             ++G QIH Y++K  L+   +VCN L++MY++ + L  A  VF D  ++ NL SWN+++
Sbjct: 476 TINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAIL 535

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           S+          + LF  M  S  +PD IT                              
Sbjct: 536 SACLQHKQAGEVFRLFKLMLFSENKPDNIT------------------------------ 565

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                ++ +L    EL  L+ G + H + +++GL  D+ V   L+DMY K   L++A++V
Sbjct: 566 -----ITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDV 620

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F + +N +IV+W+SLI GY   GL   A  +   M+   ++P+ V++  ++S  S  G  
Sbjct: 621 FGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLV 680

Query: 650 KEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
           +E     + M+   GI P     + ++    +     E+  F  +M      P+ T   +
Sbjct: 681 EEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKM---GFNPDITMWKT 737

Query: 709 LLQTC 713
           LL +C
Sbjct: 738 LLASC 742



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 139/587 (23%), Positives = 241/587 (41%), Gaps = 80/587 (13%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G    A KAF     R+   W+  +  Y   G E   ++ ++ ++   G       
Sbjct: 202 YGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAII-MYIQMLQSGYFPDPLT 260

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              I+K C       LG ++H  +IK G+D  +  + AL++ Y +   +  A+ +F+ +S
Sbjct: 261 FGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMIS 320

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV-KMLQACAKVGAFHEG 415
             +D + W  +I    +      A+ LFR+M        +  I   +  AC  +     G
Sbjct: 321 T-KDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFG 379

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +QIHG   K  L  N+     L  MY++   L  A R F  ++  +L SWN++I++++  
Sbjct: 380 RQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDS 439

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G V+ A   F +M  + + PD IT+  LL                           GS V
Sbjct: 440 GDVNEAIYFFCQMMHTGLMPDGITFLSLLCA------------------------CGSPV 475

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF-DNMK 594
           ++             G + H YI++ GLD +  V  SL+ MY K   L +A  VF D  +
Sbjct: 476 TI-----------NQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSE 524

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------ 636
           N N+V+WN+++S            ++   M   E KPD ++                   
Sbjct: 525 NANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQ 584

Query: 637 -----------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                            N L+  Y+  G  K A  +    +N    P++V+W+SLI G  
Sbjct: 585 VHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQN----PDIVSWSSLIVGYA 640

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH-CLCLKNGFIKDA 738
           Q     E+L  F  M+   ++PN  T   +L  C  +GL++ G   +  + ++ G     
Sbjct: 641 QFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTR 700

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGN 784
              + ++D+ +++G L  A    +K   N  +  W  ++     +GN
Sbjct: 701 EHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGN 747


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/641 (32%), Positives = 346/641 (53%), Gaps = 35/641 (5%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
             ++I +Y+  G V +A  +F++++S     D+++W  +++ +  +  +   L     M+ 
Sbjct: 85   TALIDAYSVSGCVSMAREVFDEISSK----DMVSWTGMIASYAENDCFSEALEFFSQMRV 140

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
             GF+PN  + + VL+A   L+    G+  H  +L+   + DLYVG  L+++Y +     +
Sbjct: 141  AGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDD 200

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
            A   F +M   +++ W+ +IS +   G    A ++  QM    + P+  +++S++   + 
Sbjct: 201  AWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASAD 260

Query: 646  WGQSKEALVIIHHMKNSGIYPNV-------------------------------VTWTSL 674
                  +  I  H   +G+  +V                               V+W ++
Sbjct: 261  IESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTI 320

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I   +Q  +   +L  F  M +  ++    T SS+L+ C  L  L+ G ++HCL  K  +
Sbjct: 321  IVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIY 380

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
             +D  V   LIDMY+K G++K AR +F     +   SWN +I G++++G G EAI +F+ 
Sbjct: 381  GQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNL 440

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            + ET  +PD +TF  +L+AC N+G ++EG +YF SM  DY I P +EHY+CMV L+G++G
Sbjct: 441  MKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSG 500

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             LD+A  FI  +PF+P   IW ALLG+C IH  +E   I+++R+ +LEP + A++ L+ N
Sbjct: 501  NLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSN 560

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A + RW +V  +R  M   GVK     SWI+    VH F+     H     I   L  
Sbjct: 561  IYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEF 620

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            L  + +K GY P    V  D++++EK ++L  H+E+LA+ +GL++  +  PIR+IKN R+
Sbjct: 621  LNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRI 680

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH+  K +S + GR+I +RD  RFHHF  G CSC D W
Sbjct: 681  CVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721



 Score =  169 bits (429), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 239/504 (47%), Gaps = 48/504 (9%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  ++K+G  + S+  +  +LI  Y   G  + A + F    S+    W+  +  Y    
Sbjct: 69  HGCVLKVG--YGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAE-N 125

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
               E LE + ++   G    +     +LK C  L  F  G  VH S++K  ++ D+++ 
Sbjct: 126 DCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVG 185

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L+  Y +C D + A + F ++    D + W+ +I    ++ + E A+++F +M+ +  
Sbjct: 186 VGLLELYTRCGDNDDAWRAFGDMPK-NDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFV 244

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                T   +LQA A + +    K IHG+ LK+ L +++ V N L++ Y++   +E +  
Sbjct: 245 IPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSME 304

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +F+++ D N  SWN++I SY  LG  + A SLF+ M   ++Q   +T+            
Sbjct: 305 LFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTY------------ 352

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                  S +L+A   L  L+ G + H    +     D+ VG +
Sbjct: 353 -----------------------SSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNA 389

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+DMY K   +++A+ +FD +  R+ V+WN++I GY   GL V A KM N M+E + KPD
Sbjct: 390 LIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPD 449

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFF 691
            +++  ++S  S  G+  E       MK   GI P +  +T ++    ++ N  +++KF 
Sbjct: 450 ELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFI 509

Query: 692 IQMQQEDI--KPNSTTMSSLLQTC 713
                EDI  +P+     +LL  C
Sbjct: 510 -----EDIPFEPSVMIWRALLGAC 528



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 141/604 (23%), Positives = 254/604 (42%), Gaps = 111/604 (18%)

Query: 251 FLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAF 310
           F+     YA  + F+E +E F             LHG+G      + T +LKL   +   
Sbjct: 14  FVTLIHGYAQSNKFIEAFELFA-----------RLHGEGHELNPFVFTTVLKLLVSMEWA 62

Query: 311 WLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
            LG  VH  ++K G+  +  +  AL++ Y     V  A ++F E+S  +D + W  +I  
Sbjct: 63  ELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISS-KDMVSWTGMIAS 121

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
              N+ +  A++ F +M+ +  K  + T   +L+AC  +  F  GK +H  VLK+  E +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           L V   L+ +Y+R    + A R F  M  +++  W+ MIS +   G  + A  +F +M  
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
           + + P+  T+                                   S VLQA  ++  L  
Sbjct: 242 AFVIPNQFTF-----------------------------------SSVLQASADIESLDL 266

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            +  HG+ L+ GL  D++V  +LM  Y K  C++ + E+F+ + +RN V+WN++I  Y  
Sbjct: 267 SKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQ 326

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSL------------------VSGYSIWGQS--- 649
            G    A  + + M   +++   V+++S+                  ++  +I+GQ    
Sbjct: 327 LGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAV 386

Query: 650 KEALVIIH----HMKNSGIYPNV------VTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
             AL+ ++     +K++    ++      V+W ++I G   +    E++K F  M++   
Sbjct: 387 GNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKC 446

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           KP+  T   +L  C   G L  GK+          +K  Y     ++ Y+          
Sbjct: 447 KPDELTFVGVLSACSNTGRLDEGKQYFT------SMKQDYGIEPCMEHYT---------- 490

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
                         CM+      GN  +A+    ++    F+P  + + ALL AC     
Sbjct: 491 --------------CMVWLMGRSGNLDQAVKFIEDI---PFEPSVMIWRALLGACVIHND 533

Query: 820 VEEG 823
           VE G
Sbjct: 534 VELG 537



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 201/463 (43%), Gaps = 44/463 (9%)

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           + + +++  L+ G+     +     L   +   G   N    + VL+ +  +   + GR 
Sbjct: 8   ERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRI 67

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG +L+ G   + ++GT+L+D Y  + C+  A+EVFD + ++++V+W  +I+ Y     
Sbjct: 68  VHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDC 127

Query: 614 FVNAKKMLNQMEEEEIKP-----------------------------------DLVSWNS 638
           F  A +  +QM     KP                                   DL     
Sbjct: 128 FSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVG 187

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           L+  Y+  G + +A      M  + + P    W+ +IS   Q+    ++L+ F QM++  
Sbjct: 188 LLELYTRCGDNDDAWRAFGDMPKNDVIP----WSFMISRFAQSGQSEKALEIFCQMRRAF 243

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           + PN  T SS+LQ    +  L   K IH   LK G   D +V+  L+  Y+K G ++ + 
Sbjct: 244 VIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSM 303

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
           E+F   +++   SWN +I+ +   G+G+ A+ LF  +L    Q   +T++++L AC    
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLA 363

Query: 819 LVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            +E G + +  +  T Y     +   + ++D+  K G + +A  F+  M    D   W A
Sbjct: 364 ALELGLQVHCLTAKTIYG--QDVAVGNALIDMYAKCGSIKDA-RFMFDMLDLRDKVSWNA 420

Query: 878 LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
           ++    +HG L    I    L K   C       +  L A SN
Sbjct: 421 IICGYSMHG-LGVEAIKMFNLMKETKCKPDELTFVGVLSACSN 462



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 7/277 (2%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSR 256
           L  +     L   K+ H   +K G   ++D  V  +L+  Y + G    + + F     R
Sbjct: 255 LQASADIESLDLSKTIHGHALKAG--LSTDVFVSNALMACYAKCGCIEQSMELFEALSDR 312

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +   W++ +  Y   G + +  L ++  +    V       + IL+ C  L A  LG++V
Sbjct: 313 NDVSWNTIIVSYVQLG-DGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQV 371

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H    K  +  DV +  AL++ Y KC  ++ A  +F ++ DL D + WN II     +  
Sbjct: 372 HCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMF-DMLDLRDKVSWNAIICGYSMHGL 430

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCN 435
              AIK+F  M+ +  K    T V +L AC+  G   EGKQ    + +   +E  +    
Sbjct: 431 GVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYT 490

Query: 436 CLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           C++ +  R+  L+ A +  + +  + ++  W +++ +
Sbjct: 491 CMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGA 527


>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Glycine max]
          Length = 945

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 218/721 (30%), Positives = 378/721 (52%), Gaps = 42/721 (5%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA--SLIKRGFDFDVH 330
           G + E + +   L  +G   R      +L+ C       +G E+H    L+++   F   
Sbjct: 63  GSLSEAVAILDSLAQQGSKVRPITFMNLLQACIDKDCILVGRELHTRIGLVRKVNPF--- 119

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           ++  L++ Y KC  ++ A K+F E+ +  +   W+ +I    R+ KWE  ++LF +M   
Sbjct: 120 VETKLVSMYAKCGHLDEARKVFDEMRE-RNLFTWSAMIGACSRDLKWEEVVELFYDMMQH 178

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                   + K+L+AC K      G+ IH  V++  + S+L V N ++++Y++  ++  A
Sbjct: 179 GVLPDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCA 238

Query: 451 TRVFDSMKDHN-----------------------------------LSSWNSMISSYTGL 475
            ++F  M + N                                   L +WN +I+SY+ L
Sbjct: 239 EKIFRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQL 298

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G+ D+A  L  KM S  I PD+ TW  ++SG    G       LLR M  +G  PN  ++
Sbjct: 299 GHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITI 358

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           +    A   ++ L  G E H   ++  +  D+ +G SL+DMY K   L+ AQ +FD M  
Sbjct: 359 ASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQSIFDVMLE 418

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
           R++ +WNS+I GYC  G    A ++  +M+E +  P++V+WN +++G+   G   EAL +
Sbjct: 419 RDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNGDEDEALNL 478

Query: 656 IHHMKNSG-IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
              ++  G I PNV +W SLISG LQN    ++L+ F QMQ  ++ PN  T+ ++L  C 
Sbjct: 479 FLRIEKDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSNMAPNLVTVLTILPACT 538

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
            L   +  KEIHC   +   + +  V+   ID Y+KSGN+  +R+VF   + K + SWN 
Sbjct: 539 NLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDGLSPKDIISWNS 598

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
           ++ G+ ++G  + A+ LF ++ + G  P  +T T++++A  ++ +V+EG   F ++S +Y
Sbjct: 599 LLSGYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAEMVDEGKHAFSNISEEY 658

Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
            I   +EHYS MV LLG++G L +A +FI+ MP +P++++W ALL +CRIH +   A  A
Sbjct: 659 QIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALLTACRIHKNFGMAIFA 718

Query: 895 SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
              + +L+P N    +L+    ++  +  + +++     E  VK  +  SWI+++ +VH 
Sbjct: 719 GEHMLELDPENIITQHLLSQAYSVCGKSWEAQKMTKLEKEKFVKMPVGQSWIEMNNMVHT 778

Query: 955 F 955
           F
Sbjct: 779 F 779



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 174/699 (24%), Positives = 314/699 (44%), Gaps = 76/699 (10%)

Query: 374  NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH---GYVLKSALESN 430
            N     A+ +   +    +K    T + +LQAC        G+++H   G V K     N
Sbjct: 62   NGSLSEAVAILDSLAQQGSKVRPITFMNLLQACIDKDCILVGRELHTRIGLVRK----VN 117

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
              V   L+SMY++   L+ A +VFD M++ NL +W++MI    G    D+ W        
Sbjct: 118  PFVETKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMI----GACSRDLKW-------- 165

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                                   + V+ L   M   G  P+   +  VL+A  + R ++ 
Sbjct: 166  -----------------------EEVVELFYDMMQHGVLPDDFLLPKVLKACGKFRDIET 202

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            GR  H  ++R G+   L+V  S++ +Y K   +  A+++F  M  RN V+WN +I+GYC 
Sbjct: 203  GRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFRRMDERNCVSWNVIITGYCQ 262

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
            +G    A+K  + M+EE ++P LV+WN L++ YS  G    A+ ++  M++ GI P+V T
Sbjct: 263  RGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDIAMDLMRKMESFGITPDVYT 322

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            WTS+ISG  Q     E+      M    ++PNS T++S    C  +  L  G EIH + +
Sbjct: 323  WTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAV 382

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K   + D  +   LIDMY+K G+L++A+ +F     + + SWN +I G+   G   +A  
Sbjct: 383  KTSMVDDILIGNSLIDMYAKGGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHE 442

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF ++ E+   P+ +T+  ++     +G  +E    F  +  D  I P +  ++ ++   
Sbjct: 443  LFMKMQESDSPPNVVTWNVMITGFMQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGF 502

Query: 851  GKAGYLDEAWDFIRTMPFK---PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
             +    D+A    R M F    P+      +L +C          +A++++ ++  C  A
Sbjct: 503  LQNRQKDKALQIFRQMQFSNMAPNLVTVLTILPACT-------NLVAAKKVKEIHCC--A 553

Query: 908  NYNLMMNLLAMSNRWED-------VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG- 959
                +++ L++SN + D       +   R   D +  K ++ W+ +    ++H  S    
Sbjct: 554  TRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGCSESAL 613

Query: 960  ---------APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
                       HP+       L  ++S       V + +  + +I EE + ++ L H   
Sbjct: 614  DLFDQMRKDGLHPSR----VTLTSIISAYSHAEMVDEGKHAFSNISEEYQIRLDLEHYSA 669

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
            +  + G     ++A +  I+N  V  +    A  ++  R
Sbjct: 670  MVYLLGRSGKLAKA-LEFIQNMPVEPNSSVWAALLTACR 707


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/613 (32%), Positives = 349/613 (56%), Gaps = 8/613 (1%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSS-RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
            +I +Y     + +A ++    +   R +   + +N L+        +++ L L   M+  
Sbjct: 56   LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 527  GFR--PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            G    P+  +  + L++ +  + L  G + H  + +  LD ++YV  S + MY +    +
Sbjct: 116  GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ-MEEEEIKPDLVSWNSLVSGY 643
            +A  VFD M +R++V+WN++I+G+   GLF  A ++  Q +  +   PD  +   ++   
Sbjct: 176  DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA- 234

Query: 644  SIWGQSK-EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
               G +K + +  +  + ++  +  +++W ++++    NE + ++++ F+ M++++++P+
Sbjct: 235  --MGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPD 292

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
            S T++++L  CG L     GK IH +  +     +  +   L+DMY+  G LK ARE+F 
Sbjct: 293  SITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFD 352

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
              + + + SW  +I  +  +G+G+EA+ LF ++L  G +PD+I F A+LAAC ++GL+ +
Sbjct: 353  LMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLAD 412

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G  YFDSM++ Y+IIP  EHY+CMVDLLG+AG ++EA+DFI TM  +P+  +WGALL +C
Sbjct: 413  GKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQAC 472

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIH +++   +A+  LF L P  +  Y L+ N+ A + RW DV  +R  M   G+K    
Sbjct: 473  RIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPG 532

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             S +++   VH F      HP +  IY +L  L+ +++ +GY P+      D++EE+K  
Sbjct: 533  TSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEEDKED 592

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLAI + L+ T     IRV  N R CSDCH AAK +S++  REI L+D  R H
Sbjct: 593  HLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIH 652

Query: 1063 HFREGECSCNDCW 1075
            H  +G CSC D W
Sbjct: 653  HIVQGVCSCGDYW 665



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 208/502 (41%), Gaps = 58/502 (11%)

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVS----DLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           H    L+  Y  C  +  A+ +    S         + +N +I     +    +A+ LF 
Sbjct: 51  HANVKLIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFA 110

Query: 386 EMQFSSAKAISR--TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
            M+           T    L++C+       G QIH  V K  L+ N+ V +  ISMYSR
Sbjct: 111 SMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSR 170

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM--------------- 488
             + E A RVFD M   ++ SWN+MI+ +  +G  D A  +F +                
Sbjct: 171 CGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAG 230

Query: 489 ---NSSRIQPD----------------IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
                   +PD                +I+WN +L+ +  +  +   + L   M+     
Sbjct: 231 ILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVE 290

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           P+  +++ VL    EL     G+  H  I R  +  +L +  +LMDMY    CL++A+E+
Sbjct: 291 PDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREI 350

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           FD M  R++++W S+IS Y   G    A  +  +M  + ++PD +++ ++++  S  G  
Sbjct: 351 FDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLL 410

Query: 650 KEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
            +       M +   I P    +T ++    +     E+  F   M    I+PN     +
Sbjct: 411 ADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTML---IEPNERVWGA 467

Query: 709 LLQTCG-----GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREV 760
           LLQ C       +GL+        +  + G+    YV   L +MY+++G   ++ S R V
Sbjct: 468 LLQACRIHSNMDIGLVAADNLFSLVPEQTGY----YVL--LSNMYARAGRWADVTSVRSV 521

Query: 761 FRKSANKTLASWNCMIMGFAIY 782
                 K     + + +G  ++
Sbjct: 522 MVNKGIKKFPGTSIVELGDQVH 543



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 2/157 (1%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ L  Y +    V+ + E++  +    V   S  L  +L  C +L AF +G  +H  +
Sbjct: 261 WNAMLAVYANNEFHVKAV-ELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEII 319

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            ++    ++ L+ ALM+ Y  C  ++ A ++F  +S   D + W  II    ++     A
Sbjct: 320 KRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMS-ARDVISWTSIISAYGKHGHGREA 378

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
           + LF +M     +  S   V +L AC+  G   +GK 
Sbjct: 379 VDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKH 415


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Brachypodium distachyon]
          Length = 923

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 248/868 (28%), Positives = 419/868 (48%), Gaps = 80/868 (9%)

Query: 246  AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
            A + F+    R+   W++ +    S  G ++E L  +  +  + +   +     ++ LC 
Sbjct: 98   AQRLFWEMPERNVVSWTALMVALSS-NGHLEEALGYYRRMRRERIACNANAFATVVSLCG 156

Query: 306  KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
             L     G++V + +I  G    V +  +L++  G    V  A KLF  + +  D + WN
Sbjct: 157  SLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEE-RDTVSWN 215

Query: 366  EIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
             ++ +         + ++F +M+     +  + T+  ++  CA       G  +H   L+
Sbjct: 216  ALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLR 275

Query: 425  SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
            + L S + V N L++MYS   KL  A  +F                           W++
Sbjct: 276  TGLHSYIPVVNALVNMYSSAGKLADAEFLF---------------------------WNM 308

Query: 485  FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
              +        D+I+WN ++S +  +G+  + L  L  +      P+  + S  L A + 
Sbjct: 309  SRR--------DLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSS 360

Query: 545  LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
               L  GR  H   L+  L ++L VG SL+ MY K + +++A+ +F  M N ++V+ N L
Sbjct: 361  PGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNIL 420

Query: 605  ISGYCFKGLFVNAKKMLNQMEEEEIK---------------------------------- 630
            I  Y        A ++   M   E+K                                  
Sbjct: 421  IGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAG 480

Query: 631  ---PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                D VS NSL++ Y+  G  + +  +   + N     +VV+W ++I+ ++Q+ +  ES
Sbjct: 481  FLSDDYVS-NSLITMYAKCGDLESSNNVFQRIINR----SVVSWNAMIAANVQHGHGEES 535

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            LK F+ M+ +    +   ++  + +   L  L+ G ++H L LK G   D++V    +DM
Sbjct: 536  LKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDM 595

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y K G +    ++    A +    WN +I G+A YG  KEA   F  ++  G  PD +TF
Sbjct: 596  YGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTF 655

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
              LL+AC ++GLV++G  Y++SMS+ + + P I+H  C+VD+LG+ G   EA  FI  MP
Sbjct: 656  VTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMP 715

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
              P+  IW +LL S R H +L+    A++RL +L+P + + Y L+ NL A S RW DV+R
Sbjct: 716  VLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDR 775

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            +R  M  + +  +   SW++  + V  F      H    +IY +L  ++ +++++GYV D
Sbjct: 776  VRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVAD 835

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSL 1047
            T     D DEE+K + L +H+EKLA+ YGL+       +R+ KN RVC+DCH   K +S+
Sbjct: 836  TSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSM 895

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            V  REI LRD  RFHHF+ G CSC+D W
Sbjct: 896  VFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 149/618 (24%), Positives = 268/618 (43%), Gaps = 81/618 (13%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA   K G   +V++  AL++ YG  + V  A +LF E+ +  + + W  +++   
Sbjct: 63  GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPE-RNVVSWTALMVALS 121

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N   E A+  +R M+       +     ++  C  +     G Q+  +V+ S L+  +S
Sbjct: 122 SNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVS 181

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N LISM                                  LG V  A  LF +M    
Sbjct: 182 VANSLISMLGN-------------------------------LGRVHDAEKLFYRME--- 207

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF-RPNGSSVSVVLQAVTELRLLKYG 551
            + D ++WN L+S +   G       +   M+  G  R + +++  ++        + YG
Sbjct: 208 -ERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYG 266

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
              H   LR GL   + V  +L++MY     L +A+ +F NM  R++++WN++IS Y   
Sbjct: 267 SGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQN 326

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI--------IHH---MK 660
           G  ++A K L Q+      PD ++++S +   S  G   +  ++        +HH   + 
Sbjct: 327 GNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVG 386

Query: 661 NSGI------------------YPN--VVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
           NS I                   PN  VV+   LI      E+  ++++ F  M++ ++K
Sbjct: 387 NSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVK 446

Query: 701 PNSTTMSSLLQTCGGLGLLQN-GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            N  T+ ++L +      L+N G  +H   +  GF+ D YV+  LI MY+K G+L+S+  
Sbjct: 447 LNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNN 506

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL-----AAC 814
           VF++  N+++ SWN MI     +G+G+E++ LF ++   G   D I     +      A 
Sbjct: 507 VFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLAS 566

Query: 815 KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
              G+   G      +  D +++      +  +D+ GK G +DE    +     +P    
Sbjct: 567 LEEGMQLHGLGLKCGLGNDSHVV------NAAMDMYGKCGKMDEMLKMLPDPAIRPQ-QC 619

Query: 875 WGALLGSCRIHGHLEYAE 892
           W  L+     +G+ + AE
Sbjct: 620 WNTLISGYARYGYFKEAE 637



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 219/528 (41%), Gaps = 72/528 (13%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  SLI      G    A K F+    R    W++ +  Y S  G   +   V+ ++  +
Sbjct: 182 VANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMY-SHEGLCSKSFRVFSDMR-R 239

Query: 289 GVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           G + R    T+  ++ +C        G  VH+  ++ G    + +  AL+N Y     + 
Sbjct: 240 GGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLA 299

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            A  LF  +S   D + WN +I   ++N    +A+K   ++  ++      T    L AC
Sbjct: 300 DAEFLFWNMSR-RDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGAC 358

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           +  GA  +G+ +H   L+ +L  NL V N LI+MY + N +E A R+F  M +H++ S N
Sbjct: 359 SSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCN 418

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
            +I SY  L     A  +F  M    ++ + IT   +L G FT                 
Sbjct: 419 ILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNIL-GSFT----------------- 460

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
                         +  +LR   YG   H Y +  G   D YV  SL+ MY K   L+++
Sbjct: 461 --------------SSNDLR--NYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESS 504

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAKKMLN----------------- 622
             VF  + NR++V+WN++I+     G       LF++ +   N                 
Sbjct: 505 NNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASL 564

Query: 623 -------QMEEEEIKPDLVSWNSLV-SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                  Q+    +K  L + + +V +   ++G+  +   ++  + +  I P    W +L
Sbjct: 565 ASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQC-WNTL 623

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           ISG  +   ++E+ + F  M      P+  T  +LL  C   GL+  G
Sbjct: 624 ISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKG 671



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 118/573 (20%), Positives = 227/573 (39%), Gaps = 97/573 (16%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ----IH 419
           W   I   +R  +   A  + R M+          +  ++ AC +   + EG+     IH
Sbjct: 11  WYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACER---WEEGRACGAAIH 67

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
               K+ L  N+ +   L+ +Y     +  A R+F  M + N                  
Sbjct: 68  ALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERN------------------ 109

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                            +++W  L+    ++G  +  L   R M+      N ++ + V+
Sbjct: 110 -----------------VVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVV 152

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
                L     G +   +++ +GL   + V  SL+ M      + +A+++F  M+ R+ V
Sbjct: 153 SLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTV 212

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEI----------------KPDLVSW------- 636
           +WN+L+S Y  +GL   + ++ + M    +                  D VS+       
Sbjct: 213 SWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSL 272

Query: 637 -------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                        N+LV+ YS  G+  +A  +  +M       ++++W ++IS  +QN N
Sbjct: 273 CLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRR----DLISWNTMISSYVQNGN 328

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
             ++LK   Q+   +  P+  T SS L  C   G L +G+ +H + L+     +  V   
Sbjct: 329 NMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNS 388

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           LI MY K  +++ A  +F+   N  + S N +I  +A+  +G +A+ +F  +     + +
Sbjct: 389 LITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLN 448

Query: 804 AITFTALLAA------CKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
            IT   +L +       +N GL    +  +   +S DY     I  Y+       K G L
Sbjct: 449 YITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYA-------KCGDL 501

Query: 857 DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLE 889
           + + +  + +        W A++ +   HGH E
Sbjct: 502 ESSNNVFQRI-INRSVVSWNAMIAANVQHGHGE 533



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 132/320 (41%), Gaps = 35/320 (10%)

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
           +R   +W + ISG    G    A  ML  M E  +     +  SLV+    W + +    
Sbjct: 5   HRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGA 64

Query: 655 IIHHM-KNSGIY-------------------------------PNVVTWTSLISGSLQNE 682
            IH + + +G+                                 NVV+WT+L+     N 
Sbjct: 65  AIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNG 124

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
           +  E+L ++ +M++E I  N+   ++++  CG L     G ++    + +G  +   VA 
Sbjct: 125 HLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVAN 184

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQ 801
            LI M    G +  A ++F +   +   SWN ++  ++  G   ++  +F ++   G  +
Sbjct: 185 SLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLR 244

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            DA T  +L++ C +S  V  G     S+     +   I   + +V++   AG L +A +
Sbjct: 245 HDATTLCSLISVCASSDYVSYG-SGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADA-E 302

Query: 862 FIRTMPFKPDATIWGALLGS 881
           F+     + D   W  ++ S
Sbjct: 303 FLFWNMSRRDLISWNTMISS 322



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 7/261 (2%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA  I  G +  SDD V  SLI  Y + GD  S+   F    +RS   W++ +       
Sbjct: 473 HAYTIHAGFL--SDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQH- 529

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G  +E L+++ ++   G       L   +     L +   G+++H   +K G   D H+ 
Sbjct: 530 GHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVV 589

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            A M+ YGKC  ++   K+  + + +     WN +I    R   ++ A + F+ M     
Sbjct: 590 NAAMDMYGKCGKMDEMLKMLPDPA-IRPQQCWNTLISGYARYGYFKEAEETFKHMISVGR 648

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELAT 451
                T V +L AC+  G   +G   +  +     +   +  C C++ +  R  +   A 
Sbjct: 649 TPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAE 708

Query: 452 RVFDSMKD-HNLSSWNSMISS 471
           +  + M    N   W S++SS
Sbjct: 709 KFIEDMPVLPNDLIWRSLLSS 729


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/556 (37%), Positives = 324/556 (58%), Gaps = 32/556 (5%)

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            G+  H  IL+ G   DL+    L++MYVK+D L +A ++FD M  RN +++ +LI GY  
Sbjct: 57   GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------GYSIWGQ---------------S 649
               F+ A ++  ++  E + P+  ++ S++       G ++  Q                
Sbjct: 117  SVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 650  KEALVIIH----HMKNS------GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
              AL+ ++     M+NS        + N VTW ++I G +Q  +  ++L+ F+ M +  +
Sbjct: 176  SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            +    T SS L+ C  L  L+ G +IH L +K  F KD  V   LIDMY+K G++K AR 
Sbjct: 236  QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF     +   SWN MI G++++G G+EA+ +F ++ ET  +PD +TF  +L+AC N+GL
Sbjct: 296  VFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGL 355

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            +++G  YF SM  D+ I P IEHY+CMV LLG+ G+LD+A   I  +PF+P   +W ALL
Sbjct: 356  LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
            G+C IH  +E   I+++R+ ++EP + A + L+ N+ A + RW++V  +R +M   GVK 
Sbjct: 416  GACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKK 475

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
                SWI+    VH F+     HP    I   L  L  + KK GY+P+   V  D+++EE
Sbjct: 476  EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEE 535

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K ++L  H+E+LA+ +G+++T S +PIR++KN R+C DCH A K +S V  REI +RD  
Sbjct: 536  KERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDIN 595

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF+EG CSC D W
Sbjct: 596  RFHHFQEGLCSCGDYW 611



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 14/301 (4%)

Query: 211 KSKHAQMIKMGKI-----WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           K  H +++K G       WN       L+  Y++      A+K F     R+   + + +
Sbjct: 58  KGLHCEILKRGGCLDLFAWNI------LLNMYVKSDFLCDASKLFDEMPERNTISFVTLI 111

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
           + Y        E +E++  LH + V+        +L+ C  +    LG ++H  +IK G 
Sbjct: 112 QGYAE-SVRFLEAIELFVRLH-REVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGL 169

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
             DV +  ALM+ Y KC  +E++ +LF+E S   +D+ WN +I+  ++    E A++LF 
Sbjct: 170 HSDVFVSNALMDVYAKCGRMENSMELFAE-SPHRNDVTWNTVIVGHVQLGDGEKALRLFL 228

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
            M     +A   T    L+ACA + A   G QIH   +K+  + ++ V N LI MY++  
Sbjct: 229 NMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCG 288

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            ++ A  VFD M   +  SWN+MIS Y+  G    A  +F+KM  + ++PD +T+  +LS
Sbjct: 289 SIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLS 348

Query: 506 G 506
            
Sbjct: 349 A 349



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 168/364 (46%), Gaps = 38/364 (10%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +H  ++KRG   D+     L+N Y K   +  A+KLF E+ +  + + +  +I    
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE-RNTISFVTLIQGYA 115

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            + ++  AI+LF  +          T   +LQACA +   + G QIH +V+K  L S++ 
Sbjct: 116 ESVRFLEAIELFVRLH-REVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVF 174

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N L+ +Y++  ++E +  +F      N                               
Sbjct: 175 VSNALMDVYAKCGRMENSMELFAESPHRN------------------------------- 203

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                +TWN ++ GH   G  +  L L   M     +    + S  L+A   L  L+ G 
Sbjct: 204 ----DVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGL 259

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + H   ++   D D+ V  +L+DMY K   +++A+ VFD M  ++ V+WN++ISGY   G
Sbjct: 260 QIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG 319

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
           L   A ++ ++M+E E+KPD +++  ++S  +  G   +       M ++ GI P +  +
Sbjct: 320 LGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHY 379

Query: 672 TSLI 675
           T ++
Sbjct: 380 TCMV 383



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 188/463 (40%), Gaps = 108/463 (23%)

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           S      LQ C +      GK +H  +LK     +L   N L++MY +++ L  A+++FD
Sbjct: 38  SHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFD 97

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            M + N  S+ ++I  Y        A  LF ++                        ++ 
Sbjct: 98  EMPERNTISFVTLIQGYAESVRFLEAIELFVRL------------------------HRE 133

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
           VL            PN  + + VLQA   +  L  G + H ++++ GL  D++V  +LMD
Sbjct: 134 VL------------PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 181

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAKKMLNQMEE-- 626
           +Y K   ++N+ E+F    +RN V WN++I G+   G       LF+N  +   Q  E  
Sbjct: 182 VYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241

Query: 627 -----------EEIKP---------------DLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
                        ++P               D+V  N+L+  Y+  G  K+A ++   M 
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMN 301

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                 + V+W ++ISG   +   RE+L+ F +MQ+ ++KP+  T   +L  C   GLL 
Sbjct: 302 KQ----DEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLD 357

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
            G+              AY  + + D                      +  + CM+    
Sbjct: 358 QGQ--------------AYFTSMIQD----------------HGIEPCIEHYTCMVWLLG 387

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
             G+  +A+ L  E+    FQP  + + ALL AC     +E G
Sbjct: 388 RGGHLDKAVKLIDEI---PFQPSVMVWRALLGACVIHNDIELG 427



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 18/196 (9%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           NS   ++ LQ C        GK +HC  LK G   D +    L++MY KS  L  A ++F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            +   +   S+  +I G+A      EAI LF   L     P+  TF ++L AC       
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVR-LHREVLPNQFTFASVLQACATM---- 151

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMV-----DLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
           EG    + +    ++I    H    V     D+  K G ++ + +     P + D T W 
Sbjct: 152 EGLNLGNQIHC--HVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT-WN 208

Query: 877 ALLGSCRIHGHLEYAE 892
            +     I GH++  +
Sbjct: 209 TV-----IVGHVQLGD 219


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/696 (33%), Positives = 380/696 (54%), Gaps = 20/696 (2%)

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
            +Q +  + I  +IVK     AK  +F      +G     +L+   S+    I + S  + 
Sbjct: 41   IQHAKPRPIPPSIVKSFTCAAK--SFFATAH-NGASFSESLQLYSSLIQQCIGIKSITDI 97

Query: 447  LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             ++ +        H+L   N +I +Y   G V  A  +F+++        I+ WN +++ 
Sbjct: 98   TKIQSHALKRGFHHSLG--NKLIDAYLKCGSVVYARKVFDEVP----HRHIVAWNSMIAS 151

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY- 565
            +  +G  +  + + + M   G  P+  + S V +A ++L L+  G+ +HG  +  G+   
Sbjct: 152  YIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVS 211

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            +++VG++L+DMY K   +++A+ V D +  +++V + +LI GY   G    + ++   M 
Sbjct: 212  NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMT 271

Query: 626  EEEIKPDLVSWNSLVSGYSIWGQSKEALV---IIHHMKNSGIYPNVVTWTSLISGSLQNE 682
            ++ I+ +  + +S++    +   + E L    +IH +       + VTWTS+I G +QN 
Sbjct: 272  KKGIEANEYTLSSVL----VCCGNLEDLTSGRLIHGLIVKAGLESAVTWTSVIVGLVQNG 327

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
                +L  F QM +  I PNS T+SS+L+ C  L +L+ GK+IH + +K G   D YV  
Sbjct: 328  REEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGA 387

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             LID Y K G+ + AR VF       + S N MI  +A  G G EA+ LF  + +TG +P
Sbjct: 388  ALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEP 447

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + +T+  +L+AC N+GL+EEG   F S     NI  T +HY+CMVDLLG+AG L EA   
Sbjct: 448  NNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEML 507

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  +    D  IW  LL +CRIHG +E A+    R+  L P +   + L+ NL A +  W
Sbjct: 508  INQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNW 566

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
              V  ++ +M E+ +K     SW+ +++ +H F A    HP   +I  +L  L+ ++K+L
Sbjct: 567  SKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKEL 626

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR-APIRVIKNTRVCSDCHTA 1041
            GYVPDTR V QD+DEE+K + L  H+EKLA+ + L ++  +   IR++KN RVC DCHT 
Sbjct: 627  GYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTW 686

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCND-CWQ 1076
             K++S + GR+I  RD  RFHHFR G CSC D CW+
Sbjct: 687  MKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYCWK 722



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/411 (22%), Positives = 168/411 (40%), Gaps = 68/411 (16%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H Q + +G   ++  +  +L+  Y +FG    A         +    +++ +  Y S  G
Sbjct: 200 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGY-SHHG 258

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           E  E L+V+  +  KG+      L+ +L  C  L     G  +H  ++K G         
Sbjct: 259 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAG--------- 309

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
                                   LE  + W  +I+  ++N + E A+  FR+M  SS  
Sbjct: 310 ------------------------LESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSIT 345

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             S T+  +L+AC+ +    +GKQIH  V+K  L+ +  V   LI  Y +    E+A  V
Sbjct: 346 PNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSV 405

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F+ + + ++ S NSMI SY   G+   A  LF+ M  + ++P+ +TW             
Sbjct: 406 FNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTW------------- 452

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              L +L    + G    G  +    +    + L K                D Y    +
Sbjct: 453 ---LGVLSACNNAGLLEEGCHIFSSARNSGNIELTK----------------DHY--ACM 491

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
           +D+  +   L+ A+ + + +   ++V W +L+S     G    AK+++N++
Sbjct: 492 VDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRV 542



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 133/278 (47%), Gaps = 8/278 (2%)

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           S   W+S +      G E   LL+ + ++    +   S  L+ +L+ C+ L     G ++
Sbjct: 312 SAVTWTSVIVGLVQNGREEIALLK-FRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQI 370

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNE 375
           HA ++K G D D ++  AL++FYGKC   E A  +F+ +  LE D++  N +I    +N 
Sbjct: 371 HAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL--LEVDVVSVNSMIYSYAQNG 428

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVC 434
               A++LF  M+ +  +  + T + +L AC   G   EG  I      S  +E      
Sbjct: 429 FGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHY 488

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            C++ +  R  +L+ A  + + +   ++  W +++S+    G V++A  + N++    + 
Sbjct: 489 ACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID--LA 546

Query: 495 PDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGFRPN 531
           P+    + LLS  + + G++  V+ +   M+ +  + N
Sbjct: 547 PEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKN 584


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/725 (31%), Positives = 385/725 (53%), Gaps = 71/725 (9%)

Query: 384  FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
            +R M    A+    T   +++ CA++G   EG+  HG V+K  LE ++  CN L++ Y++
Sbjct: 95   YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 444  NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS-RIQPDIITWNC 502
               +E A RVFD M   ++ +WN+M+  Y   G   +A + F +M+ +  +Q D      
Sbjct: 155  LGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHD------ 208

Query: 503  LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
                                  S+G       ++ +     E+  ++ G+E HGY++R+G
Sbjct: 209  ----------------------SVGI------IAALAACCLEVSSMQ-GKEIHGYVIRHG 239

Query: 563  LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            L+ D+ VGTSL+DMY K   +  A+ VF  M  R +V WN +I GY        A     
Sbjct: 240  LEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFM 299

Query: 623  QMEEEEIKPDLVSWNSLVSG-----YSIWGQSKEALVI----IHHM-------------- 659
            QM  E ++ ++V+  +L++       S++G+S    V+    + H+              
Sbjct: 300  QMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVG 359

Query: 660  ------KNSGIYPN--VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
                  K  G   N  +V+W ++I+  +  E Y E++  F+++  + + P+  TMS+++ 
Sbjct: 360  KVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVP 419

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
                LG L++ ++IH   +  G+ ++  +   ++ MY++SG++ ++RE+F K  +K + S
Sbjct: 420  AFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVIS 479

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            WN MIMG+AI+G GK A+ +F E+   G QP+  TF ++L AC  SGLV+EGW +F+ M 
Sbjct: 480  WNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLML 539

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             +Y +IP IEHY CM DLLG+ G L E   FI +MP  P + +WG+LL + R    ++ A
Sbjct: 540  QEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIA 599

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E A+ R+F+LE  N+  Y ++ ++ A + RWEDVER+R  M E G++     S +++   
Sbjct: 600  EYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHST 659

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS-HTEK 1010
               F+     H  +  I+ E+ +++S  +K+    DTR     +    +   + + H+ +
Sbjct: 660  ACSFANGDMSHSQSRTIH-EVSNILS--RKIEETDDTRNQSYPVPVATRTTTMPNKHSVR 716

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA+V+GL+ ++  +PI V KN R+C+ CH A K +S   GR I + D   +H F +G C 
Sbjct: 717  LAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCC 776

Query: 1071 CNDCW 1075
            C D W
Sbjct: 777  CGDYW 781



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 227/497 (45%), Gaps = 72/497 (14%)

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
           +++K C +L     G   H  +IK G + DV+   +L+ FY K   VE A ++F  +  +
Sbjct: 112 VVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP-V 170

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQ 417
            D + WN ++   + N     A+  F+EM  +   +  S  I+  L AC    +  +GK+
Sbjct: 171 RDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKE 230

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IHGYV++  LE ++ V   L+ MY +  ++  A  VF +M    + +WN MI  Y     
Sbjct: 231 IHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER 290

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            D A+  F +M +  +Q +++T   LL+                                
Sbjct: 291 PDEAFDCFMQMRAEGLQVEVVTAINLLAA------------------------------- 319

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
              A TE  L  YGR  HGY++R      + + T+L++MY K   +++++++F  + N+ 
Sbjct: 320 --CAQTESSL--YGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKT 375

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ--------- 648
           +V+WN++I+ Y +K ++  A  +  ++  + + PD  + +++V  + + G          
Sbjct: 376 LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHS 435

Query: 649 -------SKEALV---IIHHMKNSG------------IYPNVVTWTSLISGSLQNENYRE 686
                  ++  L+   ++H    SG            +  +V++W ++I G   +   + 
Sbjct: 436 YIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKT 495

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLI 745
           +L+ F +M+   ++PN +T  S+L  C   GL+  G    + +  + G I        + 
Sbjct: 496 ALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMT 555

Query: 746 DMYSKSGNLKSAREVFR 762
           D+  + G+L   REV +
Sbjct: 556 DLLGREGDL---REVLQ 569



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 171/382 (44%), Gaps = 36/382 (9%)

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           S  S++ S    G +D A      +      PD    N ++ G    G     L   RGM
Sbjct: 43  SSKSLVVSLAAEGRMDEAVEALAAVRG----PDAFLHNVMIRGFADAGLPAGALAAYRGM 98

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
              G RP+  +  VV++    L  L  GR +HG +++ GL++D+Y   SL+  Y K   +
Sbjct: 99  LEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLV 158

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSG 642
           ++A+ VFD M  R+IV WN+++ GY   GL   A     +M +  E++ D V   + ++ 
Sbjct: 159 EDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAA 218

Query: 643 -----YSIWGQSKEALVIIHHMKNS------------------------GIYP--NVVTW 671
                 S+ G+     VI H ++                             P   VVTW
Sbjct: 219 CCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             +I G   NE   E+   F+QM+ E ++    T  +LL  C        G+ +H   ++
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
             F+    + T L++MY K G ++S+ ++F K ANKTL SWN MI  +       EAI L
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITL 398

Query: 792 FHELLETGFQPDAITFTALLAA 813
           F ELL     PD  T + ++ A
Sbjct: 399 FLELLNQPLYPDYFTMSTVVPA 420



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 235/507 (46%), Gaps = 45/507 (8%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L   ++ H  +IK+G + +      SL+  Y + G    A + F     R    W++ ++
Sbjct: 123 LDEGRAAHGMVIKLG-LEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVD 181

Query: 267 DYESFG-GEVQELLEVWGELHGKGVIFRSRILTII-LKLCTKLMAFWLGVEVHASLIKRG 324
            Y S G G +   L  + E+H    +    +  I  L  C   ++   G E+H  +I+ G
Sbjct: 182 GYVSNGLGSLA--LACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHG 239

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            + D+ +  +L++ Y KC +V  A  +F+ +  L   + WN +I     NE+ + A   F
Sbjct: 240 LEQDIKVGTSLLDMYCKCGEVAYARSVFATMP-LRTVVTWNCMIGGYALNERPDEAFDCF 298

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            +M+    +    T + +L ACA+  +   G+ +HGYV++     ++ +   L+ MY + 
Sbjct: 299 MQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKV 358

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            K+E + ++F  + +  L SWN+MI++Y           ++ +M                
Sbjct: 359 GKVESSEKIFGKIANKTLVSWNNMIAAY-----------MYKEM---------------- 391

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
                   Y   +TL   + +    P+  ++S V+ A   L  L++ R+ H YI+  G  
Sbjct: 392 --------YTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYA 443

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            +  +  +++ MY ++  +  ++E+FD M ++++++WN++I GY   G    A +M ++M
Sbjct: 444 ENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEM 503

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNEN 683
           +   ++P+  ++ S+++  S+ G   E  +  + M +  G+ P +  +  +     +  +
Sbjct: 504 KYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGD 563

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLL 710
            RE L+F   M    I P S    SLL
Sbjct: 564 LREVLQFIESMP---IDPTSRVWGSLL 587



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 7/253 (2%)

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
           + P   S  SLV   +  G+  EA+  +  ++     P+      +I G         +L
Sbjct: 37  LPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRG----PDAFLHNVMIRGFADAGLPAGAL 92

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
             +  M ++  +P+  T   +++ C  LG L  G+  H + +K G   D Y    L+  Y
Sbjct: 93  AAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFY 152

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITF 807
           +K G ++ A  VF     + + +WN M+ G+   G G  A+  F E+ +    Q D++  
Sbjct: 153 AKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGI 212

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
            A LAAC       +G K        + +   I+  + ++D+  K G +  A     TMP
Sbjct: 213 IAALAACCLEVSSMQG-KEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP 271

Query: 868 FKPDATIWGALLG 880
            +   T W  ++G
Sbjct: 272 LRTVVT-WNCMIG 283


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/652 (32%), Positives = 336/652 (51%), Gaps = 71/652 (10%)

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLK 549
            +R  P    W   +SG    G Y + +     M + G   PN   ++ V++    +  ++
Sbjct: 73   TRTAP---VWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVE 129

Query: 550  YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW-------- 601
             G+  HG++LRNG+  D+ +  +++DMY K    + A+ VF  M  R+ V+W        
Sbjct: 130  SGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACI 189

Query: 602  -----------------------NSLISGYCFKGLFVNAKKMLNQMEEEEIK-------- 630
                                   N++ISG    G   +A   L +M +  +         
Sbjct: 190  QSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYST 249

Query: 631  ----------PDL-----------------VSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
                      PDL                    +SL+  Y   G  + A  +  H     
Sbjct: 250  AFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLT 309

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               N   W+++++G +QN    E+L  F +M +E +  +  T++S+   C  +G+++ G+
Sbjct: 310  RDMNF-AWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGR 368

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            ++H    K  +  DA +A+ ++DMY+K GNL+ AR +F ++  K +A W  M+  +A +G
Sbjct: 369  QVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHG 428

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
             G+ AI LF  +      P+ IT   +L+AC + GLV EG  YF  M  +Y I+P+IEHY
Sbjct: 429  QGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHY 488

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +C+VDL G++G LD+A +FI       +A +W  LL +CR+H H EYA++AS +L +LE 
Sbjct: 489  NCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQ 548

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
            C++ +Y ++ N+ A +N+W D   LR SM E  V+     SWI +   VH F A  A HP
Sbjct: 549  CDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHP 608

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
             + EIY  L  LV  +K++GY   T  V  D+++E++   L  H+EKLAI +G++ T S 
Sbjct: 609  QSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSG 668

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             P+R+ KN RVC DCH A KY+SL  GREI +RD  RFHHF++  CSC D W
Sbjct: 669  TPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 233/520 (44%), Gaps = 47/520 (9%)

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           H + +++ F+ + R    A  +F E        +W   I    R  ++ + ++ F EM  
Sbjct: 46  HERASVLRFWVRRRRFHDARGVFDE-RPTRTAPVWTLTISGCARRGRYADGMRAFAEM-L 103

Query: 390 SSAKAISRTIV--KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
           +  +A     V   +++ CA +G    GK++HG++L++ +  ++ +CN ++ MY++  + 
Sbjct: 104 AEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQF 163

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
           E A RVF +M + +  SWN  I +    G +  +  LF++   S ++ D  +WN ++SG 
Sbjct: 164 ERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDE---SPLR-DTTSWNTIISGL 219

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              G   + L+ LR M   G   N  + S        L L   GR+ HG +L   L+ D 
Sbjct: 220 MRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDA 279

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMK--NRNI-VAWNSLISGYCFKGLFVNAKKMLNQM 624
           +V +SLMDMY K   L+ A  VFD+     R++  AW+++++GY   G    A  +  +M
Sbjct: 280 FVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRM 339

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKE-------------------ALVIIHHMKNSG-- 663
             E +  D  +  S+ +  +  G  ++                   A  I+      G  
Sbjct: 340 LREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNL 399

Query: 664 ----------IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                        N+  WTS++     +   R +++ F +M  E + PN  T+  +L  C
Sbjct: 400 EDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSAC 459

Query: 714 GGLGLLQNGKEIHCLCLKN--GFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLA 770
             +GL+  G E++   ++   G +        ++D+Y +SG L  A+    + + N    
Sbjct: 460 SHVGLVSEG-ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAI 518

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
            W  ++    ++ + + A L   +L++   Q DA ++  L
Sbjct: 519 VWKTLLSACRLHQHNEYAKLASEKLVQLE-QCDAGSYVML 557



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 103/467 (22%), Positives = 202/467 (43%), Gaps = 18/467 (3%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           ++ GD   + + F     R    W++ +       G   + L     +   GV+F     
Sbjct: 189 IQSGDILGSMQLFDESPLRDTTSWNTIISGLMR-SGHAADALSHLRRMAQAGVVFNHYTY 247

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           +    L   L+   LG ++H  ++    + D  ++ +LM+ Y KC  +E+A  +F   S 
Sbjct: 248 STAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSP 307

Query: 358 LEDDL--LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
           L  D+   W+ ++   ++N + E A+ LFR M      A   T+  +  ACA VG   +G
Sbjct: 308 LTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQG 367

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +Q+HG V K   + +  + + ++ MY++   LE A  +FD     N++ W SM+ SY   
Sbjct: 368 RQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASH 427

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSS 534
           G   +A  LF +M + ++ P+ IT   +LS     G         + MQ   G  P+   
Sbjct: 428 GQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEH 487

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD---MYVKNDCLQNAQEVFD 591
            + ++       LL    ++  +I  N ++++  V  +L+    ++  N+  + A E   
Sbjct: 488 YNCIVDLYGRSGLLD---KAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLV 544

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI-KPDLVSW-------NSLVSGY 643
            ++  +  ++  L + Y     + +  ++   M+E ++ K    SW       ++ V+G 
Sbjct: 545 QLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGD 604

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
           +   QS E    +  +          + T L+   +++E    +LKF
Sbjct: 605 ASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKF 651



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/459 (21%), Positives = 188/459 (40%), Gaps = 86/459 (18%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           +L  +++ C  +     G  VH  +++ G   DV L  A+++ Y KC   E A ++F  +
Sbjct: 114 VLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAM 173

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE- 414
           ++  D + WN  I   +++     +++LF E       + +  I  ++++     A    
Sbjct: 174 AE-RDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHL 232

Query: 415 ------------------------------GKQIHGYVLKSALESNLSVCNCLISMYSRN 444
                                         G+Q+HG VL +ALE +  V + L+ MY + 
Sbjct: 233 RRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKC 292

Query: 445 NKLELATRVFDS----MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
             LE A  VFD      +D N  +W++M++ Y   G  + A  LF +M    +  D  T 
Sbjct: 293 GLLEAAASVFDHWSPLTRDMNF-AWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFT- 350

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                                             ++ V  A   + +++ GR+ HG + +
Sbjct: 351 ----------------------------------LTSVAAACANVGMVEQGRQVHGCVEK 376

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
                D  + ++++DMY K   L++A+ +FD    +NI  W S++  Y   G    A ++
Sbjct: 377 LWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIEL 436

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLI---- 675
             +M  E++ P+ ++   ++S  S  G   E  +    M+   GI P++  +  ++    
Sbjct: 437 FERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYG 496

Query: 676 -SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            SG L      +  K FI  ++ +I   +    +LL  C
Sbjct: 497 RSGLL------DKAKNFI--EENNINHEAIVWKTLLSAC 527



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 162/408 (39%), Gaps = 70/408 (17%)

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
           LL  GR + G  L   L    +   S++  +V+     +A+ VFD    R    W   IS
Sbjct: 25  LLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTIS 84

Query: 607 GYCFKGLFVNAKKMLNQM-EEEEIKP---------------------------------- 631
           G   +G + +  +   +M  E E  P                                  
Sbjct: 85  GCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVH 144

Query: 632 -DLVSWNSLVSGYSIWGQSKEALVIIHHMK---------------------------NSG 663
            D+V  N+++  Y+  GQ + A  +   M                            +  
Sbjct: 145 LDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDES 204

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
              +  +W ++ISG +++ +  ++L    +M Q  +  N  T S+     G L L   G+
Sbjct: 205 PLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGR 264

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA---SWNCMIMGFA 780
           ++H   L      DA+V + L+DMY K G L++A  VF   +  T     +W+ M+ G+ 
Sbjct: 265 QLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYV 324

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD-YNIIPT 839
             G  +EA+ LF  +L  G   D  T T++ AAC N G+VE+G +    +    Y +   
Sbjct: 325 QNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAP 384

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           +   S +VD+  K G L++A         K +  +W ++L S   HG 
Sbjct: 385 LA--SAIVDMYAKCGNLEDARSIFDRACTK-NIAVWTSMLCSYASHGQ 429


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
            [Glycine max]
          Length = 618

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/579 (35%), Positives = 322/579 (55%), Gaps = 40/579 (6%)

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            S++  +LQ   + R    GR  H  I+R GL+ D+     L++MY K   + +A++ F+ 
Sbjct: 44   SNLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNE 103

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------------------------- 627
            M  +++V+WN++I           A K+L QM+ E                         
Sbjct: 104  MPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILEC 163

Query: 628  ----------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                       I  +     +L+  Y+     K+A  +   M       N VTW+S+++G
Sbjct: 164  MQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEK----NAVTWSSMMAG 219

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             +QN  + E+L  F   Q      +   +SS +  C GL  L  GK++H +  K+GF  +
Sbjct: 220  YVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSN 279

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSAN-KTLASWNCMIMGFAIYGNGKEAILLFHELL 796
             YV++ LIDMY+K G ++ A  VF+     +++  WN MI GFA +    EA++LF ++ 
Sbjct: 280  IYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQ 339

Query: 797  ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
            + GF PD +T+  +L AC + GL EEG KYFD M   +N+ P++ HYSCM+D+LG+AG +
Sbjct: 340  QRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLV 399

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
             +A+D I  MPF   +++WG+LL SC+I+G++E+AEIA++ LF++EP N+ N+ L+ N+ 
Sbjct: 400  HKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIY 459

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A + +W++V R R  + E  V+     SWI+I   +H F+     HP   +IY +L +LV
Sbjct: 460  AANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLV 519

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
             E+KKL Y  DT     D++E  K  +L  H+EKLAI +GLM      PIR+IKN R+C 
Sbjct: 520  VELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICG 579

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            DCHT  K +S    REI +RD  RFHHF++G CSC + W
Sbjct: 580  DCHTFMKLVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 186/387 (48%), Gaps = 38/387 (9%)

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
           I R   L  +L+LC K  +   G   HA +I+ G + D+     L+N Y KC  V+SA K
Sbjct: 40  IDRVSNLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARK 99

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
            F+E+  ++  + WN +I    +N +   A+KL  +MQ         TI  +L  CA   
Sbjct: 100 KFNEMP-VKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKC 158

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A  E  Q+H + +K+A++SN  V   L+ +Y++ + ++ A+++F+SM + N  +W+SM++
Sbjct: 159 AILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMA 218

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y   G+                                   ++  L + R  Q +GF  
Sbjct: 219 GYVQNGF-----------------------------------HEEALLIFRNAQLMGFDQ 243

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           +   +S  + A   L  L  G++ H    ++G   ++YV +SL+DMY K  C++ A  VF
Sbjct: 244 DPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVF 303

Query: 591 DN-MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
              ++ R+IV WN++ISG+        A  +  +M++    PD V++  +++  S  G  
Sbjct: 304 QGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLH 363

Query: 650 KEALVIIHHM-KNSGIYPNVVTWTSLI 675
           +E       M +   + P+V+ ++ +I
Sbjct: 364 EEGQKYFDLMVRQHNLSPSVLHYSCMI 390



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 8/337 (2%)

Query: 173 SLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS 232
           S A P +  +     +  +S+    L    K R     ++ HAQ+I++G      D++ S
Sbjct: 25  SEAKPESSKVENVVHIDRVSNLHYLLQLCAKTRSSMGGRACHAQIIRIGL---EMDILTS 81

Query: 233 --LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGV 290
             LI  Y +     SA K F     +S   W++ +        E +E L++  ++  +G 
Sbjct: 82  NMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQ-NAEDREALKLLIQMQREGT 140

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
            F    ++ +L  C    A    +++HA  IK   D +  +  AL++ Y KC  ++ A++
Sbjct: 141 PFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQ 200

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F  + + ++ + W+ ++   ++N   E A+ +FR  Q          I   + ACA + 
Sbjct: 201 MFESMPE-KNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLA 259

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD-HNLSSWNSMI 469
              EGKQ+H    KS   SN+ V + LI MY++   +  A  VF  + +  ++  WN+MI
Sbjct: 260 TLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMI 319

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           S +        A  LF KM      PD +T+ C+L+ 
Sbjct: 320 SGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNA 356



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 12/274 (4%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA  IK     +S+  V + + H Y +      A++ F     ++   WSS +  Y   G
Sbjct: 167 HAFSIKAA--IDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNG 224

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
              + LL ++      G      +++  +  C  L     G +VHA   K GF  ++++ 
Sbjct: 225 FHEEALL-IFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVS 283

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L++ Y KC  +  A  +F  V ++   +LWN +I    R+ +   A+ LF +MQ    
Sbjct: 284 SSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGF 343

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC----NCLISMYSRNNKLE 448
                T V +L AC+ +G   EG++    +++   + NLS      +C+I +  R   + 
Sbjct: 344 FPDDVTYVCVLNACSHMGLHEEGQKYFDLMVR---QHNLSPSVLHYSCMIDILGRAGLVH 400

Query: 449 LATRVFDSMKDHNLSS-WNSMISSYTGLGYVDVA 481
            A  + + M  +  SS W S+++S    G ++ A
Sbjct: 401 KAYDLIERMPFNATSSMWGSLLASCKIYGNIEFA 434


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 235/798 (29%), Positives = 396/798 (49%), Gaps = 102/798 (12%)

Query: 313  GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            G  +H  ++KRG   D+     L+N Y K   +  A+KLF E+ +  + + +  +I    
Sbjct: 57   GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE-RNTISFVTLIQGYA 115

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
             + ++  AI+LF  +                          EG +++ +V  + L+    
Sbjct: 116  ESVRFLEAIELFVRLH------------------------REGHELNPFVFTTILK---- 147

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
                L+SM        +   +F    + N     ++I +Y+  G VDVA  +F+ +    
Sbjct: 148  ---LLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGI---- 200

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            +  D+++W  +++    +  ++  L L   M+ +GF+PN  + + V +A   L     G+
Sbjct: 201  LYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGK 260

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
              HG  L++  + DLYVG +L+D+Y K+  + +A+  F+ +  ++++ W+ +I+ Y    
Sbjct: 261  SVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSD 320

Query: 613  LFVNAKKMLNQMEEEEIKP-----------------------------------DLVSWN 637
                A +M  QM +  + P                                   D+   N
Sbjct: 321  QSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSN 380

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            +L+  Y+  G+ + ++ +     +     +V  W ++I G +Q  +  ++L+ F+ M + 
Sbjct: 381  ALMDVYAKCGRMENSMXLFAESPHRN---DVTPWNTVIVGHVQLGDGEKALRLFLNMLEY 437

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             ++    T SS L+ C  L  L+ G +IH L +K  F KD  V   LIDMY+K G++K A
Sbjct: 438  RVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA 497

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            R VF     +   SWN MI G++++G                             AC N+
Sbjct: 498  RLVFDLMNKQDEVSWNAMISGYSMHG----------------------------LACANA 529

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GL+++G  YF SM  D+ I P IEHY+CMV LLG+ G+LD+A   I  +PF+P   +W A
Sbjct: 530  GLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRA 589

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG+C IH  +E   I+++ + ++EP + A + L+ N+ A + RW++V  +R +M   GV
Sbjct: 590  LLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGV 649

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            K     SWI+    VH F+     HP    I   L  L  + KK GY+P+   V  D+++
Sbjct: 650  KKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVED 709

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            EEK ++L  H+E+LA+ +G+++T S +PIR++KN R+C DCH A K +S V  REI +RD
Sbjct: 710  EEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRD 769

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFHHF+EG CSC D W
Sbjct: 770  INRFHHFQEGLCSCGDYW 787



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 138/601 (22%), Positives = 267/601 (44%), Gaps = 84/601 (13%)

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           S      LQ C +      GK +H  +LK     +L   N L++MY +++ L  A+++FD
Sbjct: 38  SHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFD 97

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            M + N  S+ ++I  Y                 S R                    +  
Sbjct: 98  EMPERNTISFVTLIQGYA---------------ESVR--------------------FLE 122

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            + L   +   G   N    + +L+ +  +   + G   H  I + G + + +VGT+L+D
Sbjct: 123 AIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALID 182

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            Y     +  A+EVFD +  +++V+W  +++ +     F  A K+ +QM     KP+  +
Sbjct: 183 AYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFT 242

Query: 636 WNSLVS----------GYSIWG---QSKEALVIIHHMKNSGIYP---------------- 666
           + S+            G S+ G   +S+  L +   +    +Y                 
Sbjct: 243 FASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIP 302

Query: 667 --NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
             +V+ W+ +I+   Q++  +E+++ F QM+Q  + PN  T +S+LQ C  +  L  G +
Sbjct: 303 KKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQ 362

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT-LASWNCMIMGFAIYG 783
           IHC  +K G   D +V+  L+D+Y+K G ++++  +F +S ++  +  WN +I+G    G
Sbjct: 363 IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLG 422

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
           +G++A+ LF  +LE   Q   +T+++ L AC +   +E G +   S++        I   
Sbjct: 423 DGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ-IHSLTVKTTFDKDIVVT 481

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH-------GHLEYAEIASR 896
           + ++D+  K G + +A   +  +  K D   W A++    +H       G L+  +    
Sbjct: 482 NALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLLDQGQAYFT 540

Query: 897 RLFK---LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK-SVLVWSWIQIDQIV 952
            + +   +EPC   +Y  M+ LL      +   +L   +DE+  + SV+VW  +    ++
Sbjct: 541 SMIQDHGIEPC-IEHYTCMVWLLGRGGHLDKAVKL---IDEIPFQPSVMVWRALLGACVI 596

Query: 953 H 953
           H
Sbjct: 597 H 597



 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 138/622 (22%), Positives = 259/622 (41%), Gaps = 85/622 (13%)

Query: 211 KSKHAQMIKMGKI-----WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           K  H +++K G       WN       L+  Y++      A+K F     R+   + + +
Sbjct: 58  KGLHCEILKRGGCLDLFAWNI------LLNMYVKSDFLCDASKLFDEMPERNTISFVTLI 111

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
           + Y        E +E++  LH +G      + T ILKL   +    LG  +HA + K G 
Sbjct: 112 QGYAE-SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGH 170

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           + +  +  AL++ Y  C  V+ A ++F  +   +D + W  ++     N+ ++ A+KLF 
Sbjct: 171 ESNAFVGTALIDAYSVCGRVDVAREVFDGIL-YKDMVSWTGMVTCFAENDCFKEALKLFS 229

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           +M+    K  + T   + +AC  + AF  GK +HG  LKS  E +L V   L+ +Y+++ 
Sbjct: 230 QMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSG 289

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            ++ A   F+ +   ++  W+ MI+ Y        A  +F +M  + + P+         
Sbjct: 290 DIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPN--------- 340

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
             FT  S                         VLQA   +  L  G + H ++++ GL  
Sbjct: 341 -QFTFAS-------------------------VLQACATMEGLNLGNQIHCHVIKIGLHS 374

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN-IVAWNSLISGYCFKGLFVNAKKMLNQM 624
           D++V  +LMD+Y K   ++N+  +F    +RN +  WN++I G+   G    A ++   M
Sbjct: 375 DVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNM 434

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
            E  ++   V+++S +   +     +  L I      +    ++V   +LI    +  + 
Sbjct: 435 LEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSI 494

Query: 685 RES-LKFFIQMQQEDIKPNSTTMSSLLQ--TCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
           +++ L F +  +Q+++  N+      +    C   GLL  G+              AY  
Sbjct: 495 KDARLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLLDQGQ--------------AYFT 540

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
           + + D                      +  + CM+      G+  +A+ L  E+    FQ
Sbjct: 541 SMIQD----------------HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQ 581

Query: 802 PDAITFTALLAACKNSGLVEEG 823
           P  + + ALL AC     +E G
Sbjct: 582 PSVMVWRALLGACVIHNDIELG 603



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 166/375 (44%), Gaps = 13/375 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + GD   A  AF     +    WS  +  Y     + +E +E++ ++    V+
Sbjct: 280 ALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQ-SDQSKEAVEMFFQMRQALVL 338

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L+ C  +    LG ++H  +IK G   DV +  ALM+ Y KC  +E++  L
Sbjct: 339 PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXL 398

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+E     D   WN +I+  ++    E A++LF  M     +A   T    L+ACA + A
Sbjct: 399 FAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAA 458

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G QIH   +K+  + ++ V N LI MY++   ++ A  VFD M   +  SWN+MIS 
Sbjct: 459 LEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISG 518

Query: 472 YT--GL-----GYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           Y+  GL     G +D   + F  M     I+P I  + C++      G     + L+   
Sbjct: 519 YSMHGLACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLI--- 575

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
             + F+P+      +L A      ++ GR S  ++L      D      L +MY      
Sbjct: 576 DEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEME-PQDKATHVLLSNMYATAKRW 634

Query: 584 QNAQEVFDNMKNRNI 598
            N   V  NMK + +
Sbjct: 635 DNVASVRKNMKRKGV 649



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 55/123 (44%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           NS   ++ LQ C        GK +HC  LK G   D +    L++MY KS  L  A ++F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            +   +   S+  +I G+A      EAI LF  L   G + +   FT +L    +    E
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGE 156

Query: 822 EGW 824
            GW
Sbjct: 157 LGW 159


>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Cucumis sativus]
          Length = 1463

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 249/849 (29%), Positives = 427/849 (50%), Gaps = 60/849 (7%)

Query: 243  FTSAAKAFFLYFSRSYADWSSFLEDYESF---GGEVQELLEVWGELHGKGVIFRSRILTI 299
            F+S      ++F+  Y   S F +D+ S+    G ++E +     +  +G    +     
Sbjct: 28   FSSKPIKTSIFFT--YKLTSKFNDDHLSYLCSNGLLREAITAIDSISKRGSKLSTNTYIN 85

Query: 300  ILKLCTKLMAFWLGVEVHA--SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
            +L+ C  + +  LG E+H    L+ R   F   ++  L++ Y KC  ++ A K+F  + +
Sbjct: 86   LLQTCIDVGSIELGRELHVRMGLVHRVNPF---VETKLVSMYAKCGCLKDARKVFDGMQE 142

Query: 358  LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
              +   W+ +I    R ++W+  ++LF  M        +    K+LQAC         K 
Sbjct: 143  -RNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKL 201

Query: 418  IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS------- 470
            IH  V++  L   + + N +++ + +  KL LA + F +M + +  SWN MI+       
Sbjct: 202  IHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGN 261

Query: 471  ----------------------------SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
                                        SY+ LG  D+   L  KM S  + PD+ TW  
Sbjct: 262  GDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTS 321

Query: 503  LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
            ++SG          L   + M   G  PN  +++    A   L+ L+ G E H + ++ G
Sbjct: 322  MISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMG 381

Query: 563  LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            +  +  VG SL+DMY K   L+ A+ VFD +  +++  WNS+I GYC  G    A ++  
Sbjct: 382  IARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFM 441

Query: 623  QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQN 681
            ++ E  + P++V+WN+++SG    G   +A+ +   M K+ G+  N  +W SLI+G  Q 
Sbjct: 442  RLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQL 501

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                ++L  F QMQ  +  PNS T+ S+L  C  +   +  KEIH   L+     +  VA
Sbjct: 502  GEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVA 561

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
              L+D Y+KSGN+K +R VF   ++K + +WN +I G+ ++G    A  LF ++   G +
Sbjct: 562  NSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIR 621

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+  T  +++ A   +G+V++G   F S++ ++ I+PT++HY  MVDL G++G L +A +
Sbjct: 622  PNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIE 681

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            FI  MP +PD +IW +LL +CR HG+L  A +A++RL +LEP N   Y L++   A+  +
Sbjct: 682  FIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGK 741

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            +E   ++R    E  +K      W+++   VH+F         TG+   +L  L + +K 
Sbjct: 742  FEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLF--------VTGD-QSKLDVLNTWIKS 792

Query: 982  L-GYVPDTRCVYQ--DIDEEEKGKVLLSHTEKLAIVYGLM-KTKSRAPIRVIKNTRVCSD 1037
            + G V      +Q    +EE++ K+   H EK A  +GL+  + +R  I+++KN R+C D
Sbjct: 793  IEGKVKKFNNHHQLSIEEEEKEEKIGGFHCEKFAFAFGLIGSSHTRKSIKIVKNLRMCVD 852

Query: 1038 CHTAAKYMS 1046
            CH  AKY+S
Sbjct: 853  CHQMAKYIS 861


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/635 (33%), Positives = 343/635 (54%), Gaps = 47/635 (7%)

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +LFN+      + D+ +WN +++     G     L     M+ L   P  SS    ++A 
Sbjct: 30   TLFNRYVD---KTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKAC 86

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            + L  +  G+++H      G   D++V ++L+ MY     L++A++VFD +  RNIV+W 
Sbjct: 87   SSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------------------------- 636
            S+I GY   G  ++A  +   +  EE   D   +                          
Sbjct: 147  SMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIH 206

Query: 637  ---------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                           N+L+  Y+  G+    + +   + +  +  + V++ S++S   Q+
Sbjct: 207  SFVIKRGFDRGVSVGNTLLDAYAKGGEG--GVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 682  ENYRESLKFFIQMQQEDIKP-NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
                E+   F ++ +E +   N  T+S++L      G L+ GK IH   ++ G   D  V
Sbjct: 265  GMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             T +IDMY K G +++AR  F +  NK + SW  MI G+ ++G+  +A+ LF  ++++G 
Sbjct: 325  GTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ ITF ++LAAC ++GL + GW +F++M   + + P +EHY CMVDLLG+AG+L +A+
Sbjct: 385  RPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            D I+ M  +PD+ IW +LL +CRIH ++E AEI+  RLF+L+P N   Y L+ ++ A S 
Sbjct: 445  DLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSG 504

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RW+DVER+R +M   G+     +S ++++  VHVF      HP   +IY  L  L  ++ 
Sbjct: 505  RWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            + GYV +T  V  D+DEEEK   L  H+EKLAI +G+M T   + + V+KN RVCSDCH 
Sbjct: 565  EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              K +S +  RE  +RD  RFHHF++G CSC D W
Sbjct: 625  VIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 220/467 (47%), Gaps = 58/467 (12%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S + D  +  G+  E L  +  +    +          +K C+ L+  + G + H   
Sbjct: 44  WNSVIADL-ARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQA 102

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
              G+  D+ +  AL+  Y  C  +E A K+F E+    + + W  +I     N    +A
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMIRGYDLNGNALDA 161

Query: 381 IKLFREMQF------SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           + LF+++        ++    S  +V ++ AC++V A    + IH +V+K   +  +SV 
Sbjct: 162 VSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVG 221

Query: 435 NCLISMYSRNNK--LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           N L+  Y++  +  + +A ++FD + D +  S+NS++S Y   G  + A+ +F ++    
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRL---- 277

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           I+  ++T+NC+                              ++S VL AV+    L+ G+
Sbjct: 278 IKEKVVTFNCI------------------------------TLSTVLLAVSHSGALRIGK 307

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H  ++R GL+ D+ VGTS++DMY K   ++ A+  FD MKN+N+ +W ++I+GY   G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHG 367

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
               A ++   M +  ++P+ +++ S+++  S  G         + MK   G+ P +  +
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHY 427

Query: 672 TSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++     +G LQ        K +  +Q+  ++P+S   SSLL  C
Sbjct: 428 GCMVDLLGRAGFLQ--------KAYDLIQKMKMEPDSIIWSSLLAAC 466



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 120/526 (22%), Positives = 205/526 (38%), Gaps = 108/526 (20%)

Query: 331 LKCALMNFYGKCRDVESAN--KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           L C++       R  E  N   LF+   D  D   WN +I    R+     A++ F  M+
Sbjct: 9   LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMR 68

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
             S      +    ++AC+ +     GKQ H        +S++ V + LI MYS   KLE
Sbjct: 69  KLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A +VFD +   N+ SW SMI  Y   G    A SLF  +       D   +        
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMF-------- 180

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVS-VVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                         + S+G     S+ S V  + +TE          H ++++ G D  +
Sbjct: 181 --------------LDSMGMVSVISACSRVAAKGLTE--------SIHSFVIKRGFDRGV 218

Query: 568 YVGTSLMDMYVKN--DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            VG +L+D Y K     +  A+++FD + +++ V++NS++S Y   G+   A  +  ++ 
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLI 278

Query: 626 EEEI------------------------------------KPDLVSWNSLVSGYSIWGQS 649
           +E++                                    + D++   S++  Y   G+ 
Sbjct: 279 KEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           + A +    MKN     NV +WT++I+G   + +  ++L+ F  M    ++PN  T  S+
Sbjct: 339 ETARLAFDRMKN----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           L  C   GL   G   H      G                            R      L
Sbjct: 395 LAACSHAGLHDVG--WHWFNAMKG----------------------------RFGVEPGL 424

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             + CM+      G  ++A  L  ++     +PD+I +++LLAAC+
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQKM---KMEPDSIIWSSLLAACR 467



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 161/352 (45%), Gaps = 15/352 (4%)

Query: 175 ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-L 233
           AL    ++ K +     SS  C +   +    + S K  H Q    G  + SD  V S L
Sbjct: 60  ALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFG--YQSDIFVSSAL 117

Query: 234 IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL------HG 287
           I  Y   G    A K F     R+   W+S +  Y+   G   + + ++ +L        
Sbjct: 118 IVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD-LNGNALDAVSLFKDLLIEENDDD 176

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD--V 345
             +   S  +  ++  C+++ A  L   +H+ +IKRGFD  V +   L++ Y K  +  V
Sbjct: 177 ATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS-RTIVKMLQ 404
             A K+F ++ D +D + +N I+ V  ++     A  +FR +        +  T+  +L 
Sbjct: 237 AVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLL 295

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           A +  GA   GK IH  V++  LE ++ V   +I MY +  ++E A   FD MK+ N+ S
Sbjct: 296 AVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRS 355

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
           W +MI+ Y   G+   A  LF  M  S ++P+ IT+  +L+   +H    +V
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA-CSHAGLHDV 406



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 106/271 (39%), Gaps = 36/271 (13%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL-HGKGVIFRSRILTI 299
           G    A K F     +    ++S +  Y    G   E  +V+  L   K V F    L+ 
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSNEAFDVFRRLIKEKVVTFNCITLST 292

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L   +   A  +G  +H  +I+ G + DV +  ++++ Y KC  VE+A   F  + + +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKN-K 351

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +   W  +I     +     A++LF  M  S  +    T V +L AC+     H G    
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-----HAGLHDV 406

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G+   +A++    V                         +  L  +  M+      G++ 
Sbjct: 407 GWHWFNAMKGRFGV-------------------------EPGLEHYGCMVDLLGRAGFLQ 441

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            A+ L  KM   +++PD I W+ LL+    H
Sbjct: 442 KAYDLIQKM---KMEPDSIIWSSLLAACRIH 469


>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/500 (38%), Positives = 299/500 (59%), Gaps = 8/500 (1%)

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            MY K   +  A++ FD    R++   N +++ Y  +     A+K+ + M       DLVS
Sbjct: 1    MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMR----DLVS 56

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            WN+++ GY++ G+   A  I    ++   +    +W+S+IS   ++   +E+L+ + +M 
Sbjct: 57   WNTMIHGYAMRGEVGLAREIFDGTEDRDAF----SWSSMISAYAKSRRSKEALELWREMH 112

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
               I P+  T+ S++  C  LG L  G E+H     N    D  + T LIDMY+K G+++
Sbjct: 113  AASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIE 172

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            SA+ VF +   K + +W+ MI+G A +G G E++ LF +++  G +P+ +TF  +L AC 
Sbjct: 173  SAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACT 232

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + GLV EG KYF SM+  + I PT+EHY CMVDLLG++G+++EA   IR+M F+PD  IW
Sbjct: 233  HVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIW 292

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
             ALLG+CRIH ++E AE A  +L  L+P    +Y L+ N+ A +N WE V  +R ++   
Sbjct: 293  RALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRD 352

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
             ++ +   S I+ D+ +H F +    HP + EIY  L  ++  +K+ GY P T  V QDI
Sbjct: 353  NIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDI 412

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            DE+ K + L  H+EKLAI + L+ T +R+ IR+ KN R C DCH+A K +SLV  R++ +
Sbjct: 413  DEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDRKLIV 472

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHF EG+CSC D W
Sbjct: 473  RDRNRFHHFSEGQCSCKDYW 492



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 140/285 (49%), Gaps = 8/285 (2%)

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           ++ +CN +++ Y   +++  A +VFD M   +L SWN+MI  Y   G V +A  +F+   
Sbjct: 22  DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                 D  +W+ ++S +      +  L L R M +    P+  ++  V+ A ++L  L 
Sbjct: 82  DR----DAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALA 137

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G E H ++  N ++ DL +GT+L+DMY K   +++AQ VFD M  +++  W+S+I G  
Sbjct: 138 VGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLA 197

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNV 668
             GL   +  + ++M  E +KP+ V++  ++   +  G   E       M    GI P V
Sbjct: 198 NHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTV 257

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +  ++    ++ +  E+ +    M  E   P++    +LL  C
Sbjct: 258 EHYGCMVDLLGRSGHVEEARQLIRSMTFE---PDTIIWRALLGAC 299



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/416 (21%), Positives = 163/416 (39%), Gaps = 87/416 (20%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y   G+   A + F     R    WSS +  Y +     +E LE+W E+H   +I
Sbjct: 59  TMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAY-AKSRRSKEALELWREMHAASII 117

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  ++  C+ L A  +G EVH  +     + D+ L  AL++ Y KC D+ESA ++
Sbjct: 118 PDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRV 177

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + +D   W+ +I+    +     ++ LF +M     K    T V +L AC  VG 
Sbjct: 178 FDRMPE-KDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGL 236

Query: 412 FHEGK-------QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
             EGK       ++HG      +E  +    C++ +  R+  +E A ++  SM       
Sbjct: 237 VSEGKKYFRSMNEVHG------IEPTVEHYGCMVDLLGRSGHVEEARQLIRSMT------ 284

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                                        +PD I W  LL     H              
Sbjct: 285 ----------------------------FEPDTIIWRALLGACRIH-------------- 302

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN-GLDYDLYVGTSLMDMYVKNDCL 583
                    +V +  +A+ +LR+L    + H  +L N     + + G + M   ++ D +
Sbjct: 303 --------KNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNI 354

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYC--------FKGLFVNAKKMLNQMEEEEIKP 631
           Q        +  R+ + W+  I  +          K ++   ++M++++++   KP
Sbjct: 355 Q-------RIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKP 403


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/576 (34%), Positives = 334/576 (57%), Gaps = 7/576 (1%)

Query: 495  PDIIT--WNCLLSGHFTHGSYQNVLTLLRGMQSLGFR--PNGSSVSVVLQAVTELRLLKY 550
            PD  T  +N LL G      +++ L L   M+  G    P+  +  + L++      L  
Sbjct: 81   PDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVL 140

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            GR+ H    R GLD +++V  S + MY +     +A ++F+ M+ R++V+WN++ISG+  
Sbjct: 141  GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAH 200

Query: 611  KGLFVNAKKMLNQMEEEEI-KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
             GLF  A  +  ++   +  KPD  +  S++   S+     E + ++  + +   +  ++
Sbjct: 201  AGLFGRAMDVFRELVALQCPKPDAGTMASILP--SMGKARVEDIALLKGVFDEMRFKGLI 258

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +W ++++    NE + E+++ F++MQ++ I+P++ T++++L +CG +  L  GK IH + 
Sbjct: 259  SWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVI 318

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
             +        +   L+DMY+  G LK AR+VF     + + SW  +I  +  +G+G+EAI
Sbjct: 319  KRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAI 378

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             LF ++   G +PD+I F A+LAAC ++GL++ G  YF SM+++++I P +EHY+CMVDL
Sbjct: 379  DLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDL 438

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            LG+AG + EA+DFI  MP KP+  +WGALLG+CRIH +++   +A+  L +L P  +  Y
Sbjct: 439  LGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYY 498

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N+ A + RW DV  +R  M+  G+K +   S  ++   VH F      HP +  IY
Sbjct: 499  VLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIY 558

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             +L  L+  ++++GY P+      D++EE+K   L  H+EKLAI + L+ T    PIR+ 
Sbjct: 559  KKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRIT 618

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             N R CSDCH AAK +S + GREI L+D  R H+ +
Sbjct: 619  MNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 654



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 158/346 (45%), Gaps = 38/346 (10%)

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L++CA       G+QIH    +  L+ N+ V +  ISMY+R  + + A ++F+ M+  ++
Sbjct: 129 LKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDV 188

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNK--------------------MNSSRIQ-------- 494
            SWN+MIS +   G    A  +F +                    M  +R++        
Sbjct: 189 VSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGV 248

Query: 495 ------PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                   +I+WN +L+ +  +  +   + L   MQ  G  P+  +++ VL +  E+  L
Sbjct: 249 FDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSAL 308

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
             G+  H  I R  +   + +  +LMDMY    CL+ A++VFD+M  R++V+W S+IS Y
Sbjct: 309 SLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAY 368

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPN 667
              G    A  +  +M  + ++PD +++ ++++  S  G         + M +   I P 
Sbjct: 369 GRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPK 428

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +  +  ++    +    RE+  F + M    IKPN     +LL  C
Sbjct: 429 LEHYACMVDLLGRAGCIREAYDFIMVMP---IKPNERVWGALLGAC 471



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 15/205 (7%)

Query: 316 VHASLIKRGFDF---DVHLKC---------ALMNFYGKCR--DVESANKLFSEVSDLEDD 361
            HA L  R  D     V L+C         +++   GK R  D+     +F E+   +  
Sbjct: 199 AHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMR-FKGL 257

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           + WN ++ V   NE    A++LF  MQ    +  + T+  +L +C +V A   GK+IH  
Sbjct: 258 ISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEV 317

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           + +  + S++ + N L+ MY+    L+ A  VFDSM   ++ SW S+IS+Y   G+   A
Sbjct: 318 IKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREA 377

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSG 506
             LF KM    ++PD I +  +L+ 
Sbjct: 378 IDLFEKMCGQGLEPDSIAFVAILAA 402



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 9/273 (3%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ L  Y +    V E +E++  +   G+   +  L  +L  C ++ A  LG  +H  +
Sbjct: 260 WNAMLAVYTNNEMHV-EAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVI 318

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            +R     + L+ ALM+ Y  C  ++ A  +F  +    D + W  II    R+     A
Sbjct: 319 KRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGT-RDVVSWTSIISAYGRHGHGREA 377

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESNLSVCNCLI 438
           I LF +M     +  S   V +L AC+  G    GK  + Y + S   +   L    C++
Sbjct: 378 IDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKH-YFYSMTSEFHIAPKLEHYACMV 436

Query: 439 SMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
            +  R   +  A      M    N   W +++ +      +D+   L    +  R+ P  
Sbjct: 437 DLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIG--LLAADSLLRLAPKQ 494

Query: 498 ITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFR 529
             +  LLS  +   G + +V  +   M+S G +
Sbjct: 495 TGYYVLLSNIYARAGRWADVSMVRSVMESKGIK 527


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/774 (29%), Positives = 377/774 (48%), Gaps = 92/774 (11%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM--QFSSA 392
            +++ Y    D+ +A  LF   S   +   W  ++       +  +A+ LFR M  +    
Sbjct: 294  ILSAYSSSGDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIP 352

Query: 393  KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
              ++ T V  L  C           +H + +K  L++++ VCN L+  Y ++  L  A R
Sbjct: 353  DRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARR 405

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            VF  M D                                    D +T+N ++ G    G 
Sbjct: 406  VFLEMHDK-----------------------------------DAVTYNAMMMGCSKEGL 430

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            +   L L   M+  G+  +             L LL+Y         R+    +++V  S
Sbjct: 431  HTQALQLFAAMRRAGYSRH------------PLHLLQYSHSRS----RSTSVLNVFVNNS 474

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+D Y K DCL + + +FD M  R+ V++N +I+ Y +        ++  +M++      
Sbjct: 475  LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 534

Query: 633  LVSWNSLVS----------GYSIWGQ------SKEALV---IIHHMKNSGIY-------- 665
            ++ + +++S          G  I  Q      + E L+   +I      G+         
Sbjct: 535  VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 594

Query: 666  ----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 + ++WT+LI+G +QN  + E+L+ F  M++  ++P+  T SS+++    L ++  
Sbjct: 595  NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 654

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            G+++H   +++G+    +  + L+DMY+K G L  A   F +   +   SWN +I  +A 
Sbjct: 655  GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 714

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            YG  K AI +F  +L  GF PD++TF ++LAAC ++GL +E  KYF  M   Y+I P  E
Sbjct: 715  YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 774

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+C++D LG+ G   +    +  MPFK D  IW ++L SCRIHG+ E A +A+ +LF +
Sbjct: 775  HYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 834

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            EP ++  Y ++ N+ A + +WED   ++  M + GV+    +SW++I Q ++ F++    
Sbjct: 835  EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 894

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
             P   EI  EL  L  EM K GY PD  C    +D E K + L  H+E+LAI + LM T 
Sbjct: 895  SPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTP 954

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +  PIR++KN   C DCH   K +S +  R+I +RD  RFHHF++G CSC D W
Sbjct: 955  AGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 204/471 (43%), Gaps = 42/471 (8%)

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
           +  L  A  +FD M   N+ S N ++S+Y+  G +  A  LF     S    +  TW  +
Sbjct: 270 SGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIM 325

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ----AVTELRLLKYGRESHGYIL 559
           +  H   G   + L+L R M   G  P+  +V+ VL      V  L         H + +
Sbjct: 326 MRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL---------HPFAI 376

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           + GLD  ++V  +L+D Y K+  L  A+ VF  M +++ V +N+++ G   +GL   A +
Sbjct: 377 KFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ 436

Query: 620 MLNQMEEEEIKP-------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           +   M                          ++   NSL+  YS      +   +   M 
Sbjct: 437 LFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP 496

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                 + V++  +I+    N+     L+ F +MQ+          +++L   G L  + 
Sbjct: 497 ER----DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVH 552

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
            GK+IH   +  G   +  +   LIDMYSK G L +A+  F   + K+  SW  +I G+ 
Sbjct: 553 IGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYV 612

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
             G  +EA+ LF ++   G +PD  TF++++ A  +  ++  G +   S         ++
Sbjct: 613 QNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLG-RQLHSYLIRSGYKSSV 671

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
              S +VD+  K G LDEA      MP + ++  W A++ +   +G  + A
Sbjct: 672 FSGSVLVDMYAKCGCLDEALRTFDEMPER-NSISWNAVISAYAHYGEAKNA 721



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 1/229 (0%)

Query: 278 LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
           +L ++ E+   G   +      +L +   L    +G ++HA L+  G   +  L  AL++
Sbjct: 519 VLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 578

Query: 338 FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
            Y KC  +++A   FS  S+ +  + W  +I   ++N + E A++LF +M+ +  +    
Sbjct: 579 MYSKCGMLDAAKSNFSNRSE-KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRA 637

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T   +++A + +     G+Q+H Y+++S  +S++   + L+ MY++   L+ A R FD M
Sbjct: 638 TFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEM 697

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            + N  SWN++IS+Y   G    A  +F  M      PD +T+  +L+ 
Sbjct: 698 PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 746



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           FD +  R  +   SL+S     G    A+ M +QM  + I     S N ++S YS  G  
Sbjct: 253 FDVLTYRLNLGLRSLLS----SGHLHRARAMFDQMPHKNI----FSLNLILSAYSSSGD- 303

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
              L    H+  S  + N  TWT ++          ++L  F  M  E + P+  T++++
Sbjct: 304 ---LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTV 360

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           L   G          +H   +K G     +V   L+D Y K G L +AR VF +  +K  
Sbjct: 361 LNLPGC-----TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDA 415

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            ++N M+MG +  G   +A+ LF  +   G+
Sbjct: 416 VTYNAMMMGCSKEGLHTQALQLFAAMRRAGY 446



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 3/204 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  HAQ++ +G + + D +  +LI  Y + G   +A   F     +S   W++ +  Y  
Sbjct: 555 KQIHAQLVLLG-LASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 613

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G+ +E L+++ ++   G+       + I+K  + L    LG ++H+ LI+ G+   V 
Sbjct: 614 -NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVF 672

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
               L++ Y KC  ++ A + F E+ +  + + WN +I       + +NAIK+F  M   
Sbjct: 673 SGSVLVDMYAKCGCLDEALRTFDEMPE-RNSISWNAVISAYAHYGEAKNAIKMFEGMLHC 731

Query: 391 SAKAISRTIVKMLQACAKVGAFHE 414
                S T + +L AC+  G   E
Sbjct: 732 GFNPDSVTFLSVLAACSHNGLADE 755


>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/618 (35%), Positives = 338/618 (54%), Gaps = 45/618 (7%)

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
           E I+   +  K   A+     +     +  SRT+  +LQ CA   A  EGK++H ++  +
Sbjct: 29  EAIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLT 88

Query: 426 ALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
            L+   + + N LI+MY++  K   A +VFD M   NL SWN+M+S Y  LG +  A  L
Sbjct: 89  GLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKL 148

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           F+KM     + D+++WN ++  H   G +   L      + LG + NG S + VL    +
Sbjct: 149 FDKMP----EKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVK 204

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
           L+ +   R+ HG IL  G   ++ + +S++D YVK                         
Sbjct: 205 LKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVK------------------------- 239

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
               C  GL  +A+K+ ++M       D+++W ++VSGY+ WG  K A  +   M     
Sbjct: 240 ----C--GLMGDARKLFDEMSAR----DVLAWTTMVSGYAKWGDMKSANELFVEMPEK-- 287

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
             N V+WT+LISG  +N    ++L+ F +M    ++P+  T SS L  C  +  L++GK+
Sbjct: 288 --NPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQ 345

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYG 783
           IH   L+  F  +  V + LIDMYSK G+L   R+VF    NK  +  WN +I   A +G
Sbjct: 346 IHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHG 405

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            G+EAI +  +++ +G +PD ITF  +L AC +SGLV++G  +F+SMS DY I+P+ EHY
Sbjct: 406 CGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHY 465

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
           +C++DLLG+AG  +E  D +  MP+KPD  +W ALLG CRIHGH+E    A+ RL +LEP
Sbjct: 466 ACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEP 525

Query: 904 CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
            +S  Y L+ ++ A+  RWE V+++R  M+E  VK     SW++I+  VH FS   + HP
Sbjct: 526 QSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHP 585

Query: 964 ATGEIYFELYHLVSEMKK 981
              +IY  L  L  +M++
Sbjct: 586 LKEQIYSVLEQLAGQMEE 603



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 217/477 (45%), Gaps = 48/477 (10%)

Query: 285 LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL----IKRGFDFDVHLKCALMNFYG 340
           L  +G+   SR L  +L+ C    A   G  VH  L    +KR   F   L   L+N Y 
Sbjct: 50  LARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTF---LSNHLINMYA 106

Query: 341 KC-RDVES------------------------------ANKLFSEVSDLEDDLLWNEIIM 369
           KC ++VE+                              A KLF ++ + +D + WN +++
Sbjct: 107 KCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPE-KDVVSWNTMVI 165

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
              +   W+ A++ + E +    +    +   +L  C K+      +Q+HG +L +   S
Sbjct: 166 AHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLS 225

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           N+ + + ++  Y +   +  A ++FD M   ++ +W +M+S Y   G +  A  LF +M 
Sbjct: 226 NVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMP 285

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
               + + ++W  L+SG+  +G     L L   M     RP+  + S  L A   +  LK
Sbjct: 286 ----EKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLK 341

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGY 608
           +G++ H Y+LR     +  V ++L+DMY K   L   ++VFD M N+ ++V WN++IS  
Sbjct: 342 HGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISAL 401

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPN 667
              G    A +ML+ M     KPD +++  +++  S  G  ++ L     M  + GI P+
Sbjct: 402 AQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPS 461

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
              +  LI    +   + E +    Q+++   KP+    ++LL  C   G ++ G++
Sbjct: 462 QEHYACLIDLLGRAGCFEEVMD---QLEKMPYKPDDRVWNALLGVCRIHGHIELGRK 515



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 134/319 (42%), Gaps = 34/319 (10%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G    A K F     +    W++ +  +   G    E L  + E    G+      
Sbjct: 136 YAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCG-YWDEALRFYSEFRQLGIQCNGFS 194

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGF---------DFDVHLKCALM----------- 336
              +L +C KL    L  +VH  ++  GF           D ++KC LM           
Sbjct: 195 FAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMS 254

Query: 337 -----------NFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
                      + Y K  D++SAN+LF E+ + ++ + W  +I    RN     A++LF 
Sbjct: 255 ARDVLAWTTMVSGYAKWGDMKSANELFVEMPE-KNPVSWTALISGYARNGMGHKALELFT 313

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           +M     +    T    L ACA + +   GKQIH Y+L+   + N  V + LI MYS+  
Sbjct: 314 KMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCG 373

Query: 446 KLELATRVFDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            L +  +VFD M +  ++  WN++IS+    G  + A  + + M  S  +PD IT+  +L
Sbjct: 374 SLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVIL 433

Query: 505 SGHFTHGSYQNVLTLLRGM 523
           +     G  Q  L     M
Sbjct: 434 NACSHSGLVQQGLNFFESM 452


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 245/805 (30%), Positives = 403/805 (50%), Gaps = 85/805 (10%)

Query: 313  GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            G  VH+ +IK  F   + L+  L+N Y KC D  SA+KLF ++S   + + +N +I   +
Sbjct: 78   GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSK-SNIVTYNSLISGYV 136

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            +    +  + LF + +    K    T    L AC++ G    GK IHG +L   L S + 
Sbjct: 137  QMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVV 196

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            + N LI MYS+  +++ A  +FD     +  SWNS+I                       
Sbjct: 197  LTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLI----------------------- 233

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE-LRLLK-Y 550
                        +G+  +G Y+ +LT+L+ M   G   N  ++   L+A +      K +
Sbjct: 234  ------------AGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMF 281

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            G   H + ++ GL  D+ VGT+L+DMY K   L +A ++FD M ++N+V +N++++G   
Sbjct: 282  GTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQ 341

Query: 611  KGLFVN--AKKMLN---QMEEEEIKPDLVSWNSLVSG----------------------- 642
            +    +  A K LN   +M+   IKP + +++SL+                         
Sbjct: 342  QETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLL 401

Query: 643  ------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
                        YS+ G   +AL+  + + N  I P     T++I G LQN  +  +L  
Sbjct: 402  SDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVP----MTAMIXGYLQNGEFESALSL 457

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F ++   + KP+    S+++ +C  +G+L++G++I     K G  +        I MY+K
Sbjct: 458  FYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAK 517

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
            SG+L +A   F++  N  + SW+ MI   A +G+  EA+  F  +   G +P+   F  +
Sbjct: 518  SGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGV 577

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L AC + GLVEEG +YFD+M  DY +   ++H  C+VDLLG+AG L +A   I  + F+ 
Sbjct: 578  LIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEH 637

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            +  +W ALL +CRIH     A+  ++++ +LEP  SA+Y L+ N+   +       ++R 
Sbjct: 638  EPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRT 697

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
             M+E  +K     SWIQI   V+ F +    H  +G+IY +L  +++  K+L    D   
Sbjct: 698  LMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDI-- 755

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
            +   I+ E    V   H+EKLA+ +G++     AP+RV+KN R+C DCH   K  S+V  
Sbjct: 756  LGYKIEHEHLTNVNY-HSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEK 814

Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
            RE+ +RD  RFHHF++G CSC D W
Sbjct: 815  RELIVRDSVRFHHFKDGSCSCGDYW 839



 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 148/576 (25%), Positives = 252/576 (43%), Gaps = 90/576 (15%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           VK++Q+  K G  + GK +H +++K++    L + N L++MY +      A ++FD M  
Sbjct: 63  VKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSK 122

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            N+ ++NS+IS Y  +  +D    LF+K                                
Sbjct: 123 SNIVTYNSLISGYVQMSNLDKVMILFDK-------------------------------- 150

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
               + LG + +  + +  L A ++   L  G+  HG IL  GL   + +  SL+DMY K
Sbjct: 151 ---ARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSK 207

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF------------------------- 614
              +  A+ +FD+    + V+WNSLI+GY   G +                         
Sbjct: 208 CGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSA 267

Query: 615 -------VNAKKMLNQMEEEE-----IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                   N  KM   M  +      +  D+V   +L+  Y+  G   +A+ I   M   
Sbjct: 268 LKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM--- 324

Query: 663 GIYPNVVTWTSLISGSLQNENYRE-----SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            +  NVV + ++++G LQ E   +     +L  F +M+   IKP+  T SSLL+ C  + 
Sbjct: 325 -VDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVE 383

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             +  K++H L  KNG + D Y+ + LID+YS  G++  A   F    N T+     MI 
Sbjct: 384 DFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIX 443

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
           G+   G  + A+ LF+ELL    +PD    + ++++C N G++  G +     +T   I 
Sbjct: 444 GYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQ-IQGHATKVGIS 502

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
                 +  + +  K+G L  A    + M   PD   W  ++ S   HGH     + + R
Sbjct: 503 RFTIFQNSQIWMYAKSGDLYAANLTFQQME-NPDIVSWSTMICSNAQHGH----AMEALR 557

Query: 898 LFKL-EPCN--SANYNLMMNLLAMSNRWEDVERLRH 930
            F+L + C     ++  +  L+A S+R    E LR+
Sbjct: 558 FFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRY 593



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 155/706 (21%), Positives = 289/706 (40%), Gaps = 122/706 (17%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y + GD  SA K F      +   ++S +  Y      + +++ ++ +    G+ 
Sbjct: 99  NLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMS-NLDKVMILFDKARRLGLK 157

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                    L  C++      G  +H  ++  G    V L  +L++ Y KC  V+ A  L
Sbjct: 158 LDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARIL 217

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV-- 409
           F   SD  D + WN +I   ++N K+E  + + ++M  +     + T+   L+AC+    
Sbjct: 218 FDH-SDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFN 276

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G    G  +H + +K  L  ++ V   L+ MY++   L+ A ++FD M D N+  +N+M+
Sbjct: 277 GCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMM 336

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           +   GL                 +Q + I   C         +Y+  L L   M+S G +
Sbjct: 337 A---GL-----------------LQQETIEDKC---------AYK-ALNLFFEMKSCGIK 366

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           P+  + S +L+A   +   K+ ++ H  + +NGL  D Y+G+ L+D+Y     + +A   
Sbjct: 367 PSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLC 426

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F+++ N  IV   ++I GY   G F +A  +  ++   E KPD    ++++S  +  G  
Sbjct: 427 FNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGML 486

Query: 650 KEALVIIHHMKNSGIY-------------------------------PNVVTWTSLISGS 678
           +    I  H    GI                                P++V+W+++I  +
Sbjct: 487 RSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSN 546

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI------------- 725
            Q+ +  E+L+FF  M+   I+PN      +L  C   GL++ G                
Sbjct: 547 AQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLH 606

Query: 726 --HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIY 782
             HC+C              ++D+  ++G L  A   + R         W  ++    I+
Sbjct: 607 VKHCVC--------------VVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIH 652

Query: 783 GNGKEAILLFHELLETGFQPDAITFTAL-----------LAACKNSGLVEE--------- 822
            +   A  +  +++E   +P A     L           LAA K   L+EE         
Sbjct: 653 KDTVTAQRVAQKVIE--LEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGL 710

Query: 823 -----GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
                G K +  +S D +   + + Y+ + ++L     LD A D +
Sbjct: 711 SWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDIL 756



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 14/287 (4%)

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           V +  L+      G   + K + + M +   +P L   N+L++ Y   G ++ A  +   
Sbjct: 60  VDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDK 119

Query: 659 MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
           M  S    N+VT+ SLISG +Q  N  + +  F + ++  +K +  T +  L  C   G 
Sbjct: 120 MSKS----NIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGN 175

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L  GK IH L L  G      +   LIDMYSK G +  AR +F  S      SWN +I G
Sbjct: 176 LSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAG 235

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
           +   G  +E + +  ++ + G   +  T  + L AC ++     G K F +M  D+ I  
Sbjct: 236 YVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---NGCKMFGTMLHDHAIKL 292

Query: 839 TIEHYSCMV-----DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            + H   +V     D+  K G LD+A      M  K +  ++ A++ 
Sbjct: 293 GL-HLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDK-NVVMYNAMMA 337


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/588 (35%), Positives = 334/588 (56%), Gaps = 37/588 (6%)

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            G+Q L     G   SV+ + +++   ++ G+  H ++++   +  +Y+ T L+ +Y K  
Sbjct: 2    GIQGLEVEFQGYD-SVLTECISQT-AIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 59

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV- 640
            CL +A+ V D M  RN+V+W ++ISGY  +G    A  +  +M      P+  ++ +++ 
Sbjct: 60   CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 119

Query: 641  -----SGYSIWGQSKEALVI-----IHHMKNSGIYP---------------------NVV 669
                 SG+ + G+   +LVI      H    S +                       +VV
Sbjct: 120  SCTSSSGFQL-GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVV 178

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            + T++ISG  Q     E+L  F ++Q+E ++ N  T +S+L    GL  L +G+++H   
Sbjct: 179  SCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV 238

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            L+        +   LIDMYSK G+L  +R +F     +T+ SWN M++G++ +G G+EA+
Sbjct: 239  LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 298

Query: 790  LLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN-IIPTIEHYSCMV 847
             LF  + E    +PD++TF A+L+ C + G+ + G + F  M    +   P IEHY C+V
Sbjct: 299  ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 358

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DL G+AG ++EA++FI+ MPF+P A IWG+LLG+CR+H ++   E  +RRL ++E  N+ 
Sbjct: 359  DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAG 418

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            NY ++ NL A + RW+DV  +R  M E  V      SWI++DQ +H F A    HP   E
Sbjct: 419  NYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEE 478

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            ++ ++  L  ++K+ GYVP+  CV  D+D+E+K K+L  H+EKLA+ +GL+ T    P+R
Sbjct: 479  VFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVR 538

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +IKN R+C DCH  AK++S V GRE+ LRD  RFHH   G CSC D W
Sbjct: 539  IIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 197/417 (47%), Gaps = 42/417 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  C    A   G  VHA +IK  ++  V+L+  L+  Y KCR +  A ++  E+ +  
Sbjct: 16  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE-R 74

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +I    +      A+ LF EM  S       T   +L +C     F  G+QIH
Sbjct: 75  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             V+K++ ES++ V + L+ MY++  K+  A RVFD + + ++ S  ++IS Y  LG  +
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  LF                                   R +Q  G R N  + + VL
Sbjct: 195 EALDLF-----------------------------------RRLQREGMRSNYVTYASVL 219

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A++ L  L +GR+ H ++LR  L + + +  SL+DMY K   L  ++ +FD+M  R ++
Sbjct: 220 TALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVI 279

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           +WN+++ GY   GL   A ++   M+EE ++KPD V++ +++SG S  G     L I + 
Sbjct: 280 SWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYE 339

Query: 659 MKN--SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           M N   G  P +  +  ++    +     E+ +F  +M  E   P +    SLL  C
Sbjct: 340 MVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFE---PTAAIWGSLLGAC 393



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 185/435 (42%), Gaps = 78/435 (17%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L  C    A  EG+++H +++K+  E  + +   LI +Y++   L  A RV D M + N
Sbjct: 16  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                              +++W  ++SG+   G     L L  
Sbjct: 76  -----------------------------------VVSWTAMISGYSQRGYASEALHLFV 100

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M   G  PN  + + VL + T     + GR+ H  +++   +  ++VG+SL+DMY K  
Sbjct: 101 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAG 160

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----- 636
            +  A+ VFD +  R++V+  ++ISGY   GL   A  +  +++ E ++ + V++     
Sbjct: 161 KICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 220

Query: 637 ------------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                                         NSL+  YS  G    +  I   M       
Sbjct: 221 ALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPER---- 276

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            V++W +++ G  ++   RE+++ F  M++E+ +KP+S T  ++L  C   G+   G EI
Sbjct: 277 TVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEI 336

Query: 726 --HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIY 782
               +  K+GF  +      ++D++ ++G ++ A E  +K     T A W  ++    ++
Sbjct: 337 FYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 396

Query: 783 GNGKEAILLFHELLE 797
            N      +   LLE
Sbjct: 397 QNVHIGEFVARRLLE 411



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 5/278 (1%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R+   W++ +  Y S  G   E L ++ E+   G          +L  CT    F LG +
Sbjct: 74  RNVVSWTAMISGY-SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H+ +IK  F+  + +  +L++ Y K   +  A ++F  + +  D +    II    +  
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE-RDVVSCTAIISGYAQLG 191

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             E A+ LFR +Q    ++   T   +L A + + A   G+Q+H +VL++ L   + + N
Sbjct: 192 LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 251

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQ 494
            LI MYS+   L  + R+FDSM +  + SWN+M+  Y+  G    A  LF  M   ++++
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 311

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRP 530
           PD +T+  +LSG    G     L +   M  Q  GF P
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 349


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26782,
            mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 213/635 (33%), Positives = 346/635 (54%), Gaps = 47/635 (7%)

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +LFN+      + D+ +WN +++     G     L     M+ L   P  SS    ++A 
Sbjct: 30   TLFNRYVD---KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            + L  +  G+++H      G   D++V ++L+ MY     L++A++VFD +  RNIV+W 
Sbjct: 87   SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------LVS------------------ 635
            S+I GY   G  ++A  +   +  +E   D         LVS                  
Sbjct: 147  SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206

Query: 636  --------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                           N+L+  Y+  G+    + +   + +  +  + V++ S++S   Q+
Sbjct: 207  SFVIKRGFDRGVSVGNTLLDAYAKGGEG--GVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 682  ENYRESLKFFIQMQQEDIKP-NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
                E+ + F ++ +  +   N+ T+S++L      G L+ GK IH   ++ G   D  V
Sbjct: 265  GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             T +IDMY K G +++AR+ F +  NK + SW  MI G+ ++G+  +A+ LF  ++++G 
Sbjct: 325  GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ ITF ++LAAC ++GL  EGW++F++M   + + P +EHY CMVDLLG+AG+L +A+
Sbjct: 385  RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            D I+ M  KPD+ IW +LL +CRIH ++E AEI+  RLF+L+  N   Y L+ ++ A + 
Sbjct: 445  DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RW+DVER+R  M   G+     +S ++++  VHVF      HP   +IY  L  L  ++ 
Sbjct: 505  RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            + GYV +T  V  D+DEEEK   L  H+EKLAI +G+M T   + + V+KN RVCSDCH 
Sbjct: 565  EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              K +S +  RE  +RD  RFHHF++G CSC D W
Sbjct: 625  VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 220/467 (47%), Gaps = 58/467 (12%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S + D    G   + LL  +  +    +          +K C+ L   + G + H   
Sbjct: 44  WNSVIADLARSGDSAEALL-AFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
              G+  D+ +  AL+  Y  C  +E A K+F E+    + + W  +I     N    +A
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMIRGYDLNGNALDA 161

Query: 381 IKLFREM---QFSSAKAI---SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           + LF+++   +     A+   S  +V ++ AC++V A    + IH +V+K   +  +SV 
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221

Query: 435 NCLISMYSRNNK--LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           N L+  Y++  +  + +A ++FD + D +  S+NS++S Y   G  + A+ +F ++    
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL---- 277

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++  ++T+N +                              ++S VL AV+    L+ G+
Sbjct: 278 VKNKVVTFNAI------------------------------TLSTVLLAVSHSGALRIGK 307

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H  ++R GL+ D+ VGTS++DMY K   ++ A++ FD MKN+N+ +W ++I+GY   G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
               A ++   M +  ++P+ +++ S+++  S  G   E     + MK   G+ P +  +
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427

Query: 672 TSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++     +G LQ        K +  +Q+  +KP+S   SSLL  C
Sbjct: 428 GCMVDLLGRAGFLQ--------KAYDLIQRMKMKPDSIIWSSLLAAC 466



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 162/344 (47%), Gaps = 18/344 (5%)

Query: 175 ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-L 233
           AL    ++ K +     SS  C +   +    + S K  H Q    G  + SD  V S L
Sbjct: 60  ALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG--YQSDIFVSSAL 117

Query: 234 IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL------HG 287
           I  Y   G    A K F     R+   W+S +  Y+   G   + + ++ +L        
Sbjct: 118 IVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD-LNGNALDAVSLFKDLLVDENDDD 176

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD--V 345
             +   S  L  ++  C+++ A  L   +H+ +IKRGFD  V +   L++ Y K  +  V
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM---QFSSAKAISRTIVKM 402
             A K+F ++ D +D + +N I+ V  ++     A ++FR +   +  +  AI  T+  +
Sbjct: 237 AVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI--TLSTV 293

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L A +  GA   GK IH  V++  LE ++ V   +I MY +  ++E A + FD MK+ N+
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            SW +MI+ Y   G+   A  LF  M  S ++P+ IT+  +L+ 
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 115/526 (21%), Positives = 206/526 (39%), Gaps = 108/526 (20%)

Query: 331 LKCALMNFYGKCRDVESAN--KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           L C++       R  E  N   LF+   D  D   WN +I    R+     A+  F  M+
Sbjct: 9   LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR 68

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
             S      +    ++AC+ +     GKQ H        +S++ V + LI MYS   KLE
Sbjct: 69  KLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A +VFD +   N+ SW SMI  Y   G    A SLF  +       D   +        
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF-------- 180

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                         + S+G       VSV+  A + +         H ++++ G D  + 
Sbjct: 181 --------------LDSMGL------VSVI-SACSRVPAKGLTESIHSFVIKRGFDRGVS 219

Query: 569 VGTSLMDMYVKN--DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           VG +L+D Y K     +  A+++FD + +++ V++NS++S Y   G+   A ++  ++ +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279

Query: 627 EEI------------------------------------KPDLVSWNSLVSGYSIWGQSK 650
            ++                                    + D++   S++  Y   G+ +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            A      MKN     NV +WT++I+G   + +  ++L+ F  M    ++PN  T  S+L
Sbjct: 340 TARKAFDRMKN----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 711 QTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
             C   GL   G +  + +  + G          ++D+  ++G L+ A ++ ++   K  
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK-- 453

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
                                           PD+I +++LLAAC+
Sbjct: 454 --------------------------------PDSIIWSSLLAACR 467



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 109/271 (40%), Gaps = 36/271 (13%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL-HGKGVIFRSRILTI 299
           G    A K F     +    ++S +  Y    G   E  EV+  L   K V F +  L+ 
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSNEAFEVFRRLVKNKVVTFNAITLST 292

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L   +   A  +G  +H  +I+ G + DV +  ++++ Y KC  VE+A K F  + + +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN-K 351

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +   W  +I     +     A++LF  M  S  +    T V +L AC+     H G  + 
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-----HAGLHVE 406

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G+   +A++    V                         +  L  +  M+      G++ 
Sbjct: 407 GWRWFNAMKGRFGV-------------------------EPGLEHYGCMVDLLGRAGFLQ 441

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            A+ L  +M   +++PD I W+ LL+    H
Sbjct: 442 KAYDLIQRM---KMKPDSIIWSSLLAACRIH 469


>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/521 (38%), Positives = 295/521 (56%), Gaps = 8/521 (1%)

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H  + R+GLD+   +   L   Y     L  +  +F   +N ++  W ++I G+  +G  
Sbjct: 50   HAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDV 109

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
            V+A+++ + M E+     LVS  ++++ Y+  G+   A V+   M+      + V W  +
Sbjct: 110  VSAQQLFDTMPEKS----LVSLTAMLTCYAKHGELDAARVLFDGMEER----DGVCWNVM 161

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            I G  QN    E+L  F +M +   KPN  T+ S+L  CG LG L++G+ +H     NG 
Sbjct: 162  IDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGI 221

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
              + +V T L+DMYSK G+L+ AR VF K  +K + +WN MI+G+A++G  +EA+ LF  
Sbjct: 222  QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKS 281

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +   G  P  ITF  +L+AC +SG V EGW  F+ M  +Y I P IEHY CMV+LLG+AG
Sbjct: 282  MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAG 341

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
            ++++A++ ++ M  +PD  +WG LLG+CR+HG +   E     L      NS  Y L+ N
Sbjct: 342  HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSN 401

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A    W+ V RLR  M + GVK     S I+++  VH F A G  HP   EIY  L  
Sbjct: 402  IYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEE 461

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            +   +K  GY P T  V  DI E EK + L  H+EKLAI +GL+ T+    I+++KN RV
Sbjct: 462  INGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRV 521

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C+DCH   K +S + GR+I +RD  RFHHF  G CSC D W
Sbjct: 522  CADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 144/277 (51%), Gaps = 8/277 (2%)

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A ++FD+M + +L S  +M++ Y   G +D A  LF+ M     + D + WN ++ G+  
Sbjct: 112 AQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGME----ERDGVCWNVMIDGYTQ 167

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           +G     L L R M     +PN  +V  VL A  +L  L+ GR  H YI  NG+ ++++V
Sbjct: 168 NGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 227

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GT+L+DMY K   L++A+ VFD + ++++VAWNS+I GY   G    A ++   M    +
Sbjct: 228 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGL 287

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
            P  +++  ++S     G   E   I + MK+  GI P +  +  +++   +  +  ++ 
Sbjct: 288 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 347

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           +    M   +I+P+     +LL  C   G +  G++I
Sbjct: 348 ELVKNM---NIEPDPVLWGTLLGACRLHGKIALGEKI 381



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 3/176 (1%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A++  Y K  ++++A  LF  + +  D + WN +I    +N     A+ LFR M  + AK
Sbjct: 129 AMLTCYAKHGELDAARVLFDGMEE-RDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 187

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T++ +L AC ++GA   G+ +H Y+  + ++ N+ V   L+ MYS+   LE A  V
Sbjct: 188 PNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLV 247

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS--GH 507
           FD + D ++ +WNSMI  Y   G+   A  LF  M    + P  IT+  +LS  GH
Sbjct: 248 FDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGH 303



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 45/280 (16%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G+  +A   F     R    W+  ++ Y   G   + L+     L  K       +
Sbjct: 134 YAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 193

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L++ L  C +L A   G  VH+ +   G  F+VH+  AL++ Y KC  +E A  +F ++ 
Sbjct: 194 LSV-LSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 252

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           D +D + WN +I+    +   + A++LF+ M        + T + +L AC   G   EG 
Sbjct: 253 D-KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 311

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH-----NLSSWNSMISS 471
            I                                   F+ MKD       +  +  M++ 
Sbjct: 312 DI-----------------------------------FNKMKDEYGIEPKIEHYGCMVNL 336

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
               G+V+ A+ L   MN   I+PD + W  LL     HG
Sbjct: 337 LGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGACRLHG 373


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/646 (33%), Positives = 357/646 (55%), Gaps = 38/646 (5%)

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            ++  +N++I+ Y   G + +A  +F+ M S     + ++ N L+SG+ + G +++ L LL
Sbjct: 49   DVVQYNNLIALYVKCGRLGLARQVFDAMPSR----NPVSGNLLMSGYASSGRHRDALALL 104

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
            R      F  N   +S  + A   +R    GR+ HGY ++ GL    YV ++++ MY + 
Sbjct: 105  R---VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQC 161

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW---- 636
              +  A +VFDN+ + N+ A+NS+I+G+  +G    +  ++  M     + D VS+    
Sbjct: 162  AHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVL 221

Query: 637  ------NSLVSGYSIWGQS-----------KEALVIIH------HMKNS--GIYP--NVV 669
                    +V G  +  Q+             ALV ++      H  N    + P  N+V
Sbjct: 222  GHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIV 281

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +WT++++   QNE + ++L+ F+ M+ E ++PN  T +  L +C GL  L+NG  +    
Sbjct: 282  SWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACT 341

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            +K G      V   L++MYSKSG+++ AR VF     + + SWN +I+G+A +G  +EA+
Sbjct: 342  MKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAM 401

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
              FH++L     P  +TF  +L+AC   GLV+EG+ Y + M  +  + P  EHY+CMV L
Sbjct: 402  EAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGL 461

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L + G LDEA  FI +     D   W +LL SC+++ +       + ++F+L+P +   Y
Sbjct: 462  LCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTY 521

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N+ A +NRW+ V ++R  M E+GV+     SWIQ+   VHVF++E   HP   +I 
Sbjct: 522  VLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQIT 581

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             +L  L+ ++K +GYVP+      D+++E+K + L+ H+EKLA+ +GL++T     IR++
Sbjct: 582  KKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIM 641

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN R+C DCH A K +SL  GR I +RD  RFH   +G CSC+D W
Sbjct: 642  KNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 225/527 (42%), Gaps = 85/527 (16%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG  VHA ++ R   FDV     L+  Y KC  +  A ++F  +    + +  N ++   
Sbjct: 34  LGKAVHARVV-RAARFDVVQYNNLIALYVKCGRLGLARQVFDAMPS-RNPVSGNLLMSGY 91

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             + +  +A+ L R   F   + +  + V    A A V ++  G+Q HGY +K+ L  + 
Sbjct: 92  ASSGRHRDALALLRVADFGLNEYVLSSAVA---ATAHVRSYDMGRQCHGYAIKAGLAEHP 148

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            VC+ ++ MY +   ++ A +VFD++   N+ ++NSMI+ +   G +D + S+   M  +
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRN 208

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                         G + H SY  VL               S+  VVL           G
Sbjct: 209 -------------VGQWDHVSYVAVLGHC-----------ASTKEVVL-----------G 233

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            + H   L+  L+ ++YVG++L+DMY K D    A  VF+ +  +NIV+W ++++ Y   
Sbjct: 234 SQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQN 293

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSW----------------------------------- 636
            LF +A ++   ME E ++P+  ++                                   
Sbjct: 294 ELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVC 353

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
           N+L++ YS  G  ++A  +   M       +VV+W S+I G   +   RE+++ F  M  
Sbjct: 354 NALMNMYSKSGSVEDARRVFLSMPCR----DVVSWNSIIIGYAHHGRAREAMEAFHDMLF 409

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA-TGLIDMYSKSGNLK 755
            +  P+  T   +L  C  LGL+  G     + +K   +K      T ++ +  + G L 
Sbjct: 410 AEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLD 469

Query: 756 SAREVFRKSANKT-LASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            A      +   T + +W  ++    +Y N      L H + E  FQ
Sbjct: 470 EAERFIESNCIGTDVVAWRSLLSSCQVYRNYG----LGHRVAEQIFQ 512



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 143/310 (46%), Gaps = 29/310 (9%)

Query: 283 GELHGKGVIFRSRILTI----------ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G++ G   I RS +  +          +L  C       LG +VH   +KR  + +V++ 
Sbjct: 193 GQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVG 252

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ YGKC     AN++F EV   ++ + W  I+    +NE +E+A++LF +M+    
Sbjct: 253 SALVDMYGKCDFPHEANRVF-EVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGV 311

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +    T    L +CA +     G  +    +K+     L VCN L++MYS++  +E A R
Sbjct: 312 RPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARR 371

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG- 511
           VF SM   ++ SWNS+I  Y   G    A   F+ M  +   P  +T+  +LS     G 
Sbjct: 372 VFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGL 431

Query: 512 -----SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR--ESHGYILRNGLD 564
                 Y N++     M+ +G +P     + ++       L + GR  E+  +I  N + 
Sbjct: 432 VDEGFYYLNIM-----MKEVGVKPGKEHYTCMVGL-----LCRVGRLDEAERFIESNCIG 481

Query: 565 YDLYVGTSLM 574
            D+    SL+
Sbjct: 482 TDVVAWRSLL 491


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein At5g65570-like
            [Vitis vinifera]
          Length = 751

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/643 (35%), Positives = 352/643 (54%), Gaps = 38/643 (5%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            N +I +Y   G V  A  +F+++        I+ WN +++ +  +G  +  + + + M  
Sbjct: 114  NKLIDAYLKCGSVVYARKVFDEVP----HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVP 169

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQ 584
             G  P+  + S V +A ++L L+  G+ +HG  +  G+   +++VG++L+DMY K   ++
Sbjct: 170  DGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMR 229

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAKKMLNQMEEEEIKPDLV--- 634
            +A+ V D +  +++V + +LI GY   G       +F N  K   +  E  +   LV   
Sbjct: 230  DARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCG 289

Query: 635  SWNSLVSGYSIWG-----------QSKEALVIIHH----------MKNSGIYPNVVTWTS 673
            +   L SG  I G            S+ +L+ +++          +    I PN VTWTS
Sbjct: 290  NLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTS 349

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I G +QN     +L  F QM +  I PNS T+SS+L+ C  L +L+ GK+IH + +K G
Sbjct: 350  VIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFG 409

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
               D YV   LID Y K G+ + AR VF       + S N MI  +A  G G EA+ LF 
Sbjct: 410  LDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFS 469

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
             + +TG +P+ +T+  +L+AC N+GL+EEG   F S     NI  T +HY+CMVDLLG+A
Sbjct: 470  GMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRA 529

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L EA   I  +    D  IW  LL +CRIHG +E A+    R+  L P +   + L+ 
Sbjct: 530  GRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLS 588

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            NL A +  W  V  ++ +M E+ +K     SW+ +++ +H F A    HP   +I  +L 
Sbjct: 589  NLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLE 648

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR-APIRVIKNT 1032
             L+ ++K+LGYVPDTR V QD+DEE+K + L  H+EKLA+ + L ++  +   IR++KN 
Sbjct: 649  ELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNL 708

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCHT  K++S + GR+I  RD  RFHHFR G CSC D W
Sbjct: 709  RVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 195/435 (44%), Gaps = 44/435 (10%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  YL+ G    A K F     R    W+S +  Y    G  +E ++++  +   G++ 
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIR-NGRSKEAIDIYQRMVPDGILP 174

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFY---GKCRDVESA 348
                + + K  + L     G   H   +  G    +V +  AL++ Y   GK RD    
Sbjct: 175 DEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA--- 231

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            +L S+    +D +L+  +I+    + +   ++++FR M     +A   T+  +L  C  
Sbjct: 232 -RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGN 290

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +     G+ IHG ++K+ LES ++    L++MY R   ++ + +VF    + N  +W S+
Sbjct: 291 LEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSV 350

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           I      G  ++A   F +M  S I                                   
Sbjct: 351 IVGLVQNGREEIALLKFRQMLRSSIT---------------------------------- 376

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            PN  ++S VL+A + L +L+ G++ H  +++ GLD D YVG +L+D Y K    + A+ 
Sbjct: 377 -PNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARS 435

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VF+ +   ++V+ NS+I  Y   G    A ++ + M++  ++P+ V+W  ++S  +  G 
Sbjct: 436 VFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGL 495

Query: 649 SKEALVIIHHMKNSG 663
            +E   I    +NSG
Sbjct: 496 LEEGCHIFSSARNSG 510



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 2/293 (0%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H Q + +G   ++  +  +L+  Y +FG    A         +    +++ +  Y S  G
Sbjct: 199 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGY-SHHG 257

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           E  E L+V+  +  KG+      L+ +L  C  L     G  +H  ++K G +  V  + 
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQT 317

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +L+  Y +C  V+ + K+F +  +  + + W  +I+  ++N + E A+  FR+M  SS  
Sbjct: 318 SLLTMYYRCGLVDDSLKVFKQFIN-PNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSIT 376

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             S T+  +L+AC+ +    +GKQIH  V+K  L+ +  V   LI  Y +    E+A  V
Sbjct: 377 PNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSV 436

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           F+ + + ++ S NSMI SY   G+   A  LF+ M  + ++P+ +TW  +LS 
Sbjct: 437 FNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSA 489



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 155/328 (47%), Gaps = 9/328 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L+S +  H  ++K G + ++     SL+  Y   G    + K F  + + +   W+S + 
Sbjct: 294 LTSGRLIHGLIVKAG-LESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIV 352

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
                G E   LL+ + ++    +   S  L+ +L+ C+ L     G ++HA ++K G D
Sbjct: 353 GLVQNGREEIALLK-FRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 411

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFR 385
            D ++  AL++FYGKC   E A  +F+ +  LE D++  N +I    +N     A++LF 
Sbjct: 412 IDKYVGAALIDFYGKCGSTEIARSVFNGL--LEVDVVSVNSMIYSYAQNGFGHEALQLFS 469

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRN 444
            M+ +  +  + T + +L AC   G   EG  I      S  +E       C++ +  R 
Sbjct: 470 GMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRA 529

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            +L+ A  + + +   ++  W +++S+    G V++A  + N++    + P+    + LL
Sbjct: 530 GRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID--LAPEDGGTHVLL 587

Query: 505 SGHF-THGSYQNVLTLLRGMQSLGFRPN 531
           S  + + G++  V+ +   M+ +  + N
Sbjct: 588 SNLYASTGNWSKVIEMKSAMREMRLKKN 615



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           SSL+Q C G+  + +  +I    LK GF     +   LID Y K G++  AR+VF +  +
Sbjct: 81  SSLIQQCIGIKSITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVPH 138

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
           + + +WN MI  +   G  KEAI ++  ++  G  PD  TF+++  A  + GLV EG + 
Sbjct: 139 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 198

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
                     +  +   S +VD+  K G + +A   +       D  ++ AL+     HG
Sbjct: 199 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA-RLVSDQVVGKDVVLFTALIVGYSHHG 257


>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/585 (36%), Positives = 307/585 (52%), Gaps = 79/585 (13%)

Query: 500  WNCLLSGHF-----THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            WN L+  H        G   + +++   M+  G +P+  +   +LQ+     LL  GR  
Sbjct: 27   WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H  ILR GL  D +V TSL                               IS Y   GL 
Sbjct: 87   HAQILRFGLAIDPFVQTSL-------------------------------ISMYSSSGLV 115

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
              A+ +   M E                                        NV++W+ +
Sbjct: 116  DMARNLFAVMPER---------------------------------------NVISWSCM 136

Query: 675  ISGSLQNENYRESLKFFIQMQQ---EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            I+G ++   Y+E+L  F +MQ     D++PN  TMS +L  CG LG L++GK  H    K
Sbjct: 137  INGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDK 196

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAIL 790
             G   D  + T LIDMY+K G+++ A  VF     NK + +W+ MI G A++G  +E + 
Sbjct: 197  CGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVG 256

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF +++  G +P+A+TF A+  AC + GLV EG  Y   M+ DY+IIPTI+HY CMVDL 
Sbjct: 257  LFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLY 316

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG + EAW+ +++MP +PD  +WGALL   R+HG +E  E+A ++L +LEP NS  Y 
Sbjct: 317  GRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYV 376

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A   RWEDV  +R  M+ +G+K V   S I++  ++H F      HP T +I+ 
Sbjct: 377  LLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHM 436

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  ++  +K  GYV +T+ V  D+DEE K   L  H+EKLA+ YG +KT    PIR++K
Sbjct: 437  MLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVK 496

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R+C DCH A K +S V  REI +RD  RFHHF +G CSC D W
Sbjct: 497  NLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 168/387 (43%), Gaps = 86/387 (22%)

Query: 360 DDLLWNEIIMVKLRNEKW-----ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           +  LWN +I   ++          + I +F  M+F   +    T   +LQ+ A     H 
Sbjct: 23  ESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHL 82

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+ +H  +L+  L  +  V   LISMYS +  +++A  +F  M + N+ SW+ MI+ Y  
Sbjct: 83  GRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVR 142

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG---FRPN 531
            G                                    Y+  L L R MQ LG    RPN
Sbjct: 143 CG-----------------------------------QYKEALALFREMQMLGVNDVRPN 167

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             ++S VL A   L  L++G+ +H YI + G+  D+ +GT+L+DMY K   ++ A  VF 
Sbjct: 168 EFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFS 227

Query: 592 NM-KNRNIVAWNSLISGYCFKGLFVNA----KKMLNQ----------------------- 623
           N+  N++++AW+++ISG    GL         KM+NQ                       
Sbjct: 228 NLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVS 287

Query: 624 ---------MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                     E+  I P +  +  +V  Y   G+ KEA  ++   K+  + P+V+ W +L
Sbjct: 288 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVV---KSMPMEPDVLVWGAL 344

Query: 675 ISGSLQN---ENYRESLKFFIQMQQED 698
           +SGS  +   E    +LK  I+++  +
Sbjct: 345 LSGSRMHGDIETCELALKKLIELEPTN 371



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 48/326 (14%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG  VHA +++ G   D  ++ +L++ Y     V+ A  LF+ + +  + + W+ +I   
Sbjct: 82  LGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPE-RNVISWSCMINGY 140

Query: 372 LRNEKWENAIKLFREMQFSSAKAISR---TIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
           +R  +++ A+ LFREMQ      +     T+  +L AC ++GA   GK  H Y+ K  + 
Sbjct: 141 VRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMP 200

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            ++ +   LI MY++   +E AT VF ++  + ++ +W++MIS     G  +    LF+K
Sbjct: 201 VDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSK 260

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M +                                    G RPN  +   V  A     L
Sbjct: 261 MINQ-----------------------------------GVRPNAVTFLAVFCACVHGGL 285

Query: 548 LKYGRESHGYILRNGLDYDLYVGTS----LMDMYVKNDCLQNAQEVFDNMK-NRNIVAWN 602
           +  G++   Y+ R   DY +         ++D+Y +   ++ A  V  +M    +++ W 
Sbjct: 286 VSEGKD---YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWG 342

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEE 628
           +L+SG    G     +  L ++ E E
Sbjct: 343 ALLSGSRMHGDIETCELALKKLIELE 368



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 171/429 (39%), Gaps = 60/429 (13%)

Query: 211 KSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           +S HAQ+++ G     D  V+ SLI  Y   G    A   F +   R+   WS  +  Y 
Sbjct: 84  RSVHAQILRFG--LAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYV 141

Query: 270 SFGGEVQELLEVWGELHGKGV-IFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFD 326
             G + +E L ++ E+   GV   R    T+  +L  C +L A   G   HA + K G  
Sbjct: 142 RCG-QYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMP 200

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            DV L  AL++ Y KC  VE A  +FS +   +D + W+ +I     +   E  + LF +
Sbjct: 201 VDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSK 260

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNN 445
           M     +  + T + +  AC   G   EGK  +       ++   +    C++ +Y R  
Sbjct: 261 MINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAG 320

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
           +++ A  V  SM                                   ++PD++ W  LLS
Sbjct: 321 RIKEAWNVVKSMP----------------------------------MEPDVLVWGALLS 346

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV-------TELRLLKYGRESHGYI 558
           G   HG  +     L+ +  L   P  S   V+L  V        ++R ++   E+ G  
Sbjct: 347 GSRMHGDIETCELALKKLIEL--EPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIK 404

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
              G    + VG  L + +V +D     +++   ++         ++     +G   N K
Sbjct: 405 KVPGCSL-IEVGGVLHEFFVGDDSHPETRQIHMMLEE--------ILERLKVEGYVGNTK 455

Query: 619 KMLNQMEEE 627
           ++L  ++EE
Sbjct: 456 EVLLDLDEE 464


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/727 (31%), Positives = 381/727 (52%), Gaps = 75/727 (10%)

Query: 384  FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
            +R M    A+    T   +++ CA++G   EG+  HG V+K  LE ++  CN L++ Y++
Sbjct: 95   YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 444  NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS-RIQPDIITWNC 502
               +E A RVFD M   ++ +WN M+  Y   G   +A + F +M+ +  +Q D      
Sbjct: 155  LGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHD------ 208

Query: 503  LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
                                  S+G       ++ +     E   ++ G+E HGY++R+G
Sbjct: 209  ----------------------SVGI------IAALAACCLEFSSMQ-GKEIHGYVIRHG 239

Query: 563  LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            L+ D+ VGTSL+DMY K   +  A+ VF  M  R +V WN +I GY        A     
Sbjct: 240  LEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFM 299

Query: 623  QMEEEEIKPDLVSWNSLVSG-----YSIWGQSKEALVI----IHHM-------------- 659
            QM  E ++ ++V+  +L++       S++G+S    V+    + H+              
Sbjct: 300  QMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVG 359

Query: 660  ------KNSGIYPN--VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
                  K  G   N  +V+W ++I+  +  E Y E++  F+++  + + P+  TMS+++ 
Sbjct: 360  KVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVP 419

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
                LG L++ ++IH   +  G+ ++  +   ++ MY++SG++ ++RE+F K  +K + S
Sbjct: 420  AFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVIS 479

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            WN MIMG+AI+G GK A+ +F E+   G QP+  TF ++L AC  SGLV+EGW +F+ M 
Sbjct: 480  WNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLML 539

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
             +Y +IP IEHY CM DLLG+ G L E   FI +MP  P + +WG+LL + R    ++ A
Sbjct: 540  QEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIA 599

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E A+ R+F+LE  N+  Y ++ ++ A + RWEDVER+R  M E G++     S +++   
Sbjct: 600  EYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHST 659

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEM--KKLGYVPDTRCVYQDIDEEEKGKVLLS-HT 1008
               F+     H  +  I     H VS++  +K+    DTR     +    +   + + H+
Sbjct: 660  ACSFANGDMSHSQSRTI-----HEVSDILSRKIKETDDTRNQSYPVPVATRTTTMPNKHS 714

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
             +LA+V+GL+ ++  +PI V KN R+C+ CH A K +S   GR I + D   +H F +G 
Sbjct: 715  VRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGS 774

Query: 1069 CSCNDCW 1075
            C C D W
Sbjct: 775  CCCGDYW 781



 Score =  159 bits (403), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 227/497 (45%), Gaps = 72/497 (14%)

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
           +++K C +L     G   H  +IK G + DV+   +L+ FY K   VE A ++F  +  +
Sbjct: 112 VVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP-V 170

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQ 417
            D + WN ++   + N     A+  F+EM  +   +  S  I+  L AC    +  +GK+
Sbjct: 171 RDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKE 230

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IHGYV++  LE ++ V   L+ MY +  ++  A  VF +M    + +WN MI  Y     
Sbjct: 231 IHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER 290

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            D A+  F +M +  +Q +++T   LL+                                
Sbjct: 291 PDEAFDCFMQMRAEGLQVEVVTAINLLAA------------------------------- 319

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
              A TE  L  YGR  HGY++R      + + T+L++MY K   +++++++F  + N+ 
Sbjct: 320 --CAQTESSL--YGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKT 375

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ--------- 648
           +V+WN++I+ Y +K ++  A  +  ++  + + PD  + +++V  + + G          
Sbjct: 376 LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHS 435

Query: 649 -------SKEALV---IIHHMKNSG------------IYPNVVTWTSLISGSLQNENYRE 686
                  ++  L+   ++H    SG            +  +V++W ++I G   +   + 
Sbjct: 436 YIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKT 495

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLI 745
           +L+ F +M+   ++PN +T  S+L  C   GL+  G    + +  + G I        + 
Sbjct: 496 ALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMT 555

Query: 746 DMYSKSGNLKSAREVFR 762
           D+  + G+L   REV +
Sbjct: 556 DLLGREGDL---REVLQ 569



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 170/382 (44%), Gaps = 36/382 (9%)

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           S  S++ S    G +D A      +      PD    N ++ G    G     L   RGM
Sbjct: 43  SSKSLVVSLAAEGRMDEAVEALAAVRG----PDAFLHNVMIRGFADAGLPAGALAAYRGM 98

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
              G RP+  +  VV++    L  L  GR +HG +++ GL++D+Y   SL+  Y K   +
Sbjct: 99  LEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLV 158

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSG 642
           ++A+ VFD M  R+IV WN ++ GY   GL   A     +M +  E++ D V   + ++ 
Sbjct: 159 EDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAA 218

Query: 643 -----YSIWGQSKEALVIIHHMKNS------------------------GIYP--NVVTW 671
                 S+ G+     VI H ++                             P   VVTW
Sbjct: 219 CCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             +I G   NE   E+   F+QM+ E ++    T  +LL  C        G+ +H   ++
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
             F+    + T L++MY K G ++S+ ++F K ANKTL SWN MI  +       EAI L
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITL 398

Query: 792 FHELLETGFQPDAITFTALLAA 813
           F ELL     PD  T + ++ A
Sbjct: 399 FLELLNQPLYPDYFTMSTVVPA 420



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/507 (23%), Positives = 233/507 (45%), Gaps = 45/507 (8%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L   ++ H  +IK+G + +      SL+  Y + G    A + F     R    W+  ++
Sbjct: 123 LDEGRAAHGMVIKLG-LEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVD 181

Query: 267 DYESFG-GEVQELLEVWGELHGKGVIFRSRILTII-LKLCTKLMAFWLGVEVHASLIKRG 324
            Y S G G +   L  + E+H    +    +  I  L  C    +   G E+H  +I+ G
Sbjct: 182 GYVSNGLGSLA--LACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHG 239

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            + D+ +  +L++ Y KC +V  A  +F+ +  L   + WN +I     NE+ + A   F
Sbjct: 240 LEQDIKVGTSLLDMYCKCGEVAYARSVFATMP-LRTVVTWNCMIGGYALNERPDEAFDCF 298

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            +M+    +    T + +L ACA+  +   G+ +HGYV++     ++ +   L+ MY + 
Sbjct: 299 MQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKV 358

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            K+E + ++F  + +  L SWN+MI++Y           ++ +M                
Sbjct: 359 GKVESSEKIFGKIANKTLVSWNNMIAAY-----------MYKEM---------------- 391

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
                   Y   +TL   + +    P+  ++S V+ A   L  L++ R+ H YI+  G  
Sbjct: 392 --------YTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYA 443

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            +  +  +++ MY ++  +  ++E+FD M ++++++WN++I GY   G    A +M ++M
Sbjct: 444 ENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEM 503

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNEN 683
           +   ++P+  ++ S+++  S+ G   E  +  + M +  G+ P +  +  +     +  +
Sbjct: 504 KYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGD 563

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLL 710
            RE L+F   M    I P S    SLL
Sbjct: 564 LREVLQFIESMP---IDPTSRVWGSLL 587



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 7/253 (2%)

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
           + P   S  SLV   +  G+  EA+  +  ++     P+      +I G         +L
Sbjct: 37  LPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRG----PDAFLHNVMIRGFADAGLPAGAL 92

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
             +  M ++  +P+  T   +++ C  LG L  G+  H + +K G   D Y    L+  Y
Sbjct: 93  AAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFY 152

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITF 807
           +K G ++ A  VF     + + +WN M+ G+   G G  A+  F E+ +    Q D++  
Sbjct: 153 AKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGI 212

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
            A LAAC       +G K        + +   I+  + ++D+  K G +  A     TMP
Sbjct: 213 IAALAACCLEFSSMQG-KEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP 271

Query: 868 FKPDATIWGALLG 880
            +   T W  ++G
Sbjct: 272 LRTVVT-WNCMIG 283


>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
 gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/612 (35%), Positives = 334/612 (54%), Gaps = 16/612 (2%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            ++S  + L   D + S+F   NS    P ++  N L+ G   +  +++ +     M  LG
Sbjct: 66   LVSCSSLLKSPDYSLSIFR--NSEERNPFVL--NALIRGLTENARFESSVRHFILMLRLG 121

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             +P+  +   VL++ ++L     GR  H   L+N +D D +V  SL+DMY K   L++A 
Sbjct: 122  VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAF 181

Query: 588  EVF----DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            +VF    D +K  +I+ WN LI+GYC       A  +   M E     +  SW++L+ GY
Sbjct: 182  QVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGY 237

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
               G+   A  +   M       NVV+WT+LI+G  Q  +Y  ++  + +M ++ +KPN 
Sbjct: 238  VDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNE 293

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             T++++L  C   G L +G  IH   L NG   D  + T L+DMY+K G L  A  VF  
Sbjct: 294  YTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN 353

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +K + SW  MI G+A++G   +AI  F +++ +G +PD + F A+L AC NS  V+ G
Sbjct: 354  MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
              +FDSM  DY I PT++HY  +VDLLG+AG L+EA + +  MP  PD T W AL  +C+
Sbjct: 414  LNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACK 473

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
             H     AE  S+ L +L+P    +Y  +    A     +DVE+ R S+ +   +  L W
Sbjct: 474  AHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGW 533

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S+I++D  ++ FSA    H  T EI  +L  ++S   + GY P       DI+EEEK  V
Sbjct: 534  SYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENV 593

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
               H+EKLA+  G ++T     IR+IKN R+C DCH+  KY+S +  R+I LRD  +FHH
Sbjct: 594  TGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHH 653

Query: 1064 FREGECSCNDCW 1075
            F++G CSC D W
Sbjct: 654  FKDGRCSCGDYW 665



 Score =  130 bits (327), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 191/440 (43%), Gaps = 74/440 (16%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VHA +++RG      +   L++     +  + +  +F   S+  +  + N +I     N 
Sbjct: 48  VHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSIFRN-SEERNPFVLNALIRGLTENA 105

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN----- 430
           ++E++++ F  M     K    T   +L++ +K+G    G+ +H   LK+ ++ +     
Sbjct: 106 RFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRL 165

Query: 431 ------------------------------LSVCNCLISMYSRNNKLELATRVFDSMKDH 460
                                         + + N LI+ Y R   + +AT +F SM + 
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           N  SW+++I  Y   G ++ A  LF  M     + ++++W  L++G    G Y+  ++  
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTLINGFSQTGDYETAISTY 281

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M   G +PN  +++ VL A ++   L  G   HGYIL NG+  D  +GT+L+DMY K 
Sbjct: 282 FEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS----- 635
             L  A  VF NM +++I++W ++I G+   G F  A +   QM     KPD V      
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401

Query: 636 ---------------WNSLVSGYSIWGQSKEALVIIHHMKNSG-------------IYPN 667
                          ++S+   Y+I    K  ++++  +  +G             I P+
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461

Query: 668 VVTWTSLISGSLQNENYRES 687
           + TW +L      ++ YR +
Sbjct: 462 LTTWAALYRACKAHKGYRRA 481



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 4/239 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y++ G+   A + F L   ++   W++ +  + S  G+ +  +  + E+  KG+ 
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGF-SQTGDYETAISTYFEMLEKGLK 290

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C+K  A   G+ +H  ++  G   D  +  AL++ Y KC +++ A  +
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           FS ++  +D L W  +I     + ++  AI+ FR+M +S  K      + +L AC     
Sbjct: 351 FSNMNH-KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409

Query: 412 FHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
              G      + L  A+E  L     ++ +  R  KL  A  + ++M  + +L++W ++
Sbjct: 410 VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 48/345 (13%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL- 358
           +LK  +KL   WLG  +HA+ +K   D D  ++ +L++ Y K   ++ A ++F E  D  
Sbjct: 132 VLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRI 191

Query: 359 --EDDLLWNEIIMVKLRNEKWENAIKLFREM-------------------QFSSAKAI-- 395
             E  L+WN +I    R +    A  LFR M                   + + AK +  
Sbjct: 192 KKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFE 251

Query: 396 ---SRTIVK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
               + +V    ++   ++ G +      +  +L+  L+ N      ++S  S++  L  
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311

Query: 450 ATRVFDSMKDHNL----SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
             R+   + D+ +    +   +++  Y   G +D A ++F+ MN      DI++W  ++ 
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN----HKDILSWTAMIQ 367

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV-----TELRLLKYGRESHGYILR 560
           G   HG +   +   R M   G +P+      VL A       +L L  +      Y + 
Sbjct: 368 GWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIE 427

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSL 604
             L + + V    +D+  +   L  A E+ +NM  N ++  W +L
Sbjct: 428 PTLKHYVLV----VDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 107/276 (38%), Gaps = 22/276 (7%)

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           P+ +   SL+  C     L   + +H   L+ G +  + VA  L+   S   +   +  +
Sbjct: 27  PDESHFISLIHACKDTASL---RHVHAQILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSI 82

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
           FR S  +     N +I G       + ++  F  +L  G +PD +TF  +L +    G  
Sbjct: 83  FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGA 877
             G     +   ++    +    S +VD+  K G L  A+      P    K    IW  
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLS-LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201

Query: 878 LL-GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
           L+ G CR         +A+     +   NS +++ ++     S      ++L   M E  
Sbjct: 202 LINGYCRAKD----MHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE-- 255

Query: 937 VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
            K+V+ W+      +++ FS  G    A    YFE+
Sbjct: 256 -KNVVSWT-----TLINGFSQTGDYETAIS-TYFEM 284


>gi|242034187|ref|XP_002464488.1| hypothetical protein SORBIDRAFT_01g019317 [Sorghum bicolor]
 gi|241918342|gb|EER91486.1| hypothetical protein SORBIDRAFT_01g019317 [Sorghum bicolor]
          Length = 701

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 236/723 (32%), Positives = 372/723 (51%), Gaps = 45/723 (6%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN II   ++N  ++ A++ F EM   S +  + T+  +L ACA + A   GKQ+H YVL
Sbjct: 13   WNCIISGCVQNALYDEALEFFLEM-CESERPDAVTVASILPACAGLQALGIGKQLHSYVL 71

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            +  ++ N+ V   LI++YS   + + A  VF ++++ N++ WN ++ SY   G +D AW 
Sbjct: 72   RCGIKINVYVGASLIALYSECGEFDDARVVFSTIQEKNVNVWNELVQSYIREGSMDKAWE 131

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
             F+ M    ++PDI+T+N  ++ +   G  +    L   M  +G +PN  S++ ++  + 
Sbjct: 132  AFDLMQEDGLEPDIVTYNSFIAAYAKVGQNEQAYELFSRMADVGLKPNVVSMNALICGLH 191

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
               L     E+  Y+ R+                  +D         DN     I    +
Sbjct: 192  RHGLYTDALEAFRYMQRS------------------SDGKSKGWAFLDNCDP--IQPTGT 231

Query: 604  LISGYCFKGLFVNAKKMLNQMEEE----EIKPDLVS----WNSLVSGYSIWGQSKEALVI 655
             I+G     L + A   L+++ +E     +K  L S     + LV  Y   G    A  +
Sbjct: 232  TITGV----LSLLADLKLDRLGKEVHCYALKNGLASNIYISSKLVDLYGKIGDMTSAANV 287

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
               + N     NVVTW SL++    N     +LK   +M Q ++ PN  T+   L +CG 
Sbjct: 288  FQKIGNK----NVVTWNSLMAAYKHNRMPEVTLKLLGEMFQSNLHPNLVTVHIALMSCGV 343

Query: 716  LGLLQNGKEIHCL---CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
               L  G+E+H     C   G+     +A+ LI+MY K GN++ AR VF+ +  K +A W
Sbjct: 344  TMALGYGRELHSYITKCWPGGY--PTTLASALINMYGKCGNIEDARLVFKSTVPKDIAVW 401

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            N M+  + ++    + I LF+ L ++G QPD ITF  LL+ACK  GL EE   YF +M  
Sbjct: 402  NAMMSCYLLHRMPMDIIDLFNYLEQSGIQPDHITFILLLSACKQEGLFEEAQSYFYNMED 461

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
             Y I P+++HY+CMVD++G AG L E+   I+ MP KPDA +W  +L +C++H +LE  E
Sbjct: 462  VYGIKPSLKHYTCMVDIMGSAGLLAESLTLIQKMPLKPDACLWSTVLKACKLHSNLEIGE 521

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
             A++ LF+LEP N +NY ++ N+ A +   +  E +R +M E G+      SW+     V
Sbjct: 522  KAAKALFELEPHNPSNYMVLSNIYADTGLLDASEAVRDAMTEQGLHVDRQCSWLYNGTTV 581

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            H F A    HPA   I     HL   M++  Y  +    Y ++   E   +   HTEK+A
Sbjct: 582  HSFEAGNLSHPAIDAILSTWKHLTVRMEQSRYSTEDIGPYYNV---EVDPLSCHHTEKIA 638

Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
            + YGL+ T    PIR+ KN R+C +CH++ K++S    REI + DG  +HHF++G CSC 
Sbjct: 639  VCYGLISTYDHQPIRISKNFRMCMECHSSIKFISRDMNREIIVSDGCTYHHFKDGTCSCR 698

Query: 1073 DCW 1075
            D W
Sbjct: 699  DAW 701



 Score =  202 bits (514), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 215/414 (51%), Gaps = 19/414 (4%)

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M    + P + +WNC++SG   +  Y   L     M     RP+  +V+ +L A   L+ 
Sbjct: 1   MRQRGVDPGVNSWNCIISGCVQNALYDEALEFFLEMCE-SERPDAVTVASILPACAGLQA 59

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L  G++ H Y+LR G+  ++YVG SL+ +Y +     +A+ VF  ++ +N+  WN L+  
Sbjct: 60  LGIGKQLHSYVLRCGIKINVYVGASLIALYSECGEFDDARVVFSTIQEKNVNVWNELVQS 119

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
           Y  +G    A +  + M+E+ ++PD+V++NS ++ Y+  GQ+++A  +   M + G+ PN
Sbjct: 120 YIREGSMDKAWEAFDLMQEDGLEPDIVTYNSFIAAYAKVGQNEQAYELFSRMADVGLKPN 179

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQ---------------EDIKPNSTTMSSLLQT 712
           VV+  +LI G  ++  Y ++L+ F  MQ+               + I+P  TT++ +L  
Sbjct: 180 VVSMNALICGLHRHGLYTDALEAFRYMQRSSDGKSKGWAFLDNCDPIQPTGTTITGVLSL 239

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
              L L + GKE+HC  LKNG   + Y+++ L+D+Y K G++ SA  VF+K  NK + +W
Sbjct: 240 LADLKLDRLGKEVHCYALKNGLASNIYISSKLVDLYGKIGDMTSAANVFQKIGNKNVVTW 299

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
           N ++  +      +  + L  E+ ++   P+ +T    L +C  +  +  G +    ++ 
Sbjct: 300 NSLMAAYKHNRMPEVTLKLLGEMFQSNLHPNLVTVHIALMSCGVTMALGYGRELHSYITK 359

Query: 833 DYNIIPTIEHYSCMVDLLGKAGYLDEA-WDFIRTMPFKPDATIWGALLGSCRIH 885
            +         S ++++ GK G +++A   F  T+P   D  +W A++    +H
Sbjct: 360 CWPGGYPTTLASALINMYGKCGNIEDARLVFKSTVP--KDIAVWNAMMSCYLLH 411



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/562 (20%), Positives = 223/562 (39%), Gaps = 125/562 (22%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL  C  L A  +G ++H+ +++ G   +V++  +L+  Y +C + + A  +FS + + +
Sbjct: 50  ILPACAGLQALGIGKQLHSYVLRCGIKINVYVGASLIALYSECGEFDDARVVFSTIQE-K 108

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +  +WNE++   +R    + A + F  MQ    +    T    + A AKVG   +  ++ 
Sbjct: 109 NVNVWNELVQSYIREGSMDKAWEAFDLMQEDGLEPDIVTYNSFIAAYAKVGQNEQAYELF 168

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             +    L+ N+   N LI    R+     A   F  M+        S      G  ++D
Sbjct: 169 SRMADVGLKPNVVSMNALICGLHRHGLYTDALEAFRYMQ-------RSSDGKSKGWAFLD 221

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                    N   IQ                                   P G++++ VL
Sbjct: 222 ---------NCDPIQ-----------------------------------PTGTTITGVL 237

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
             + +L+L + G+E H Y L+NGL  ++Y+ + L+D+Y K   + +A  VF  + N+N+V
Sbjct: 238 SLLADLKLDRLGKEVHCYALKNGLASNIYISSKLVDLYGKIGDMTSAANVFQKIGNKNVV 297

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------------------ 635
            WNSL++ Y    +     K+L +M +  + P+LV+                        
Sbjct: 298 TWNSLMAAYKHNRMPEVTLKLLGEMFQSNLHPNLVTVHIALMSCGVTMALGYGRELHSYI 357

Query: 636 ---W---------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
              W         ++L++ Y   G  ++A ++      S +  ++  W +++S  L +  
Sbjct: 358 TKCWPGGYPTTLASALINMYGKCGNIEDARLVF----KSTVPKDIAVWNAMMSCYLLHRM 413

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
             + +  F  ++Q  I+P+  T   LL  C   GL +  +                    
Sbjct: 414 PMDIIDLFNYLEQSGIQPDHITFILLLSACKQEGLFEEAQSYF---------------YN 458

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           + D+Y    +LK                + CM+      G   E++ L  ++     +PD
Sbjct: 459 MEDVYGIKPSLK---------------HYTCMVDIMGSAGLLAESLTLIQKM---PLKPD 500

Query: 804 AITFTALLAACKNSGLVEEGWK 825
           A  ++ +L ACK    +E G K
Sbjct: 501 ACLWSTVLKACKLHSNLEIGEK 522



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 11/241 (4%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           +T +L L   L    LG EVH   +K G   ++++   L++ YGK  D+ SA  +F ++ 
Sbjct: 233 ITGVLSLLADLKLDRLGKEVHCYALKNGLASNIYISSKLVDLYGKIGDMTSAANVFQKIG 292

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           + ++ + WN ++     N   E  +KL  EM  S+      T+   L +C    A   G+
Sbjct: 293 N-KNVVTWNSLMAAYKHNRMPEVTLKLLGEMFQSNLHPNLVTVHIALMSCGVTMALGYGR 351

Query: 417 QIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY--- 472
           ++H Y+ K        ++ + LI+MY +   +E A  VF S    +++ WN+M+S Y   
Sbjct: 352 ELHSYITKCWPGGYPTTLASALINMYGKCGNIEDARLVFKSTVPKDIAVWNAMMSCYLLH 411

Query: 473 -TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRP 530
              +  +D    LFN +  S IQPD IT+  LLS     G ++   +    M+ + G +P
Sbjct: 412 RMPMDIID----LFNYLEQSGIQPDHITFILLLSACKQEGLFEEAQSYFYNMEDVYGIKP 467

Query: 531 N 531
           +
Sbjct: 468 S 468



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 5/186 (2%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQEL-LEVWGELHGKGVI 291
           L+  Y + GD TSAA  F    +++   W+S +  Y+     + E+ L++ GE+    + 
Sbjct: 271 LVDLYGKIGDMTSAANVFQKIGNKNVVTWNSLMAAYKH--NRMPEVTLKLLGEMFQSNLH 328

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKR-GFDFDVHLKCALMNFYGKCRDVESANK 350
                + I L  C   MA   G E+H+ + K     +   L  AL+N YGKC ++E A  
Sbjct: 329 PNLVTVHIALMSCGVTMALGYGRELHSYITKCWPGGYPTTLASALINMYGKCGNIEDARL 388

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F      +D  +WN ++   L +    + I LF  ++ S  +    T + +L AC + G
Sbjct: 389 VFKSTVP-KDIAVWNAMMSCYLLHRMPMDIIDLFNYLEQSGIQPDHITFILLLSACKQEG 447

Query: 411 AFHEGK 416
            F E +
Sbjct: 448 LFEEAQ 453


>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like
            [Glycine max]
          Length = 622

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/588 (35%), Positives = 323/588 (54%), Gaps = 41/588 (6%)

Query: 490  SSRIQ-PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
            +S+IQ P++  +N L+ G  T  + +N           G  P+  +   +++A  +L   
Sbjct: 74   ASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENA 133

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
              G ++HG  +++G + D YV  SL+ MY     +  A+ VF  M               
Sbjct: 134  PMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRM--------------- 178

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
                                 + D+VSW  +++GY   G +K A  +   M       N+
Sbjct: 179  --------------------CRFDVVSWTCMIAGYHRCGDAKSARELFDRMPER----NL 214

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            VTW+++ISG  +N  + ++++ F  +Q E +  N T M  ++ +C  LG L  G++ H  
Sbjct: 215  VTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEY 274

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
             ++N    +  + T ++DMY++ GN++ A  VF +   K +  W  +I G A++G  ++A
Sbjct: 275  VMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKA 334

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +  F E+ + GF P  ITFTA+L AC ++G+VE G + F+SM  D+ + P +EHY CMVD
Sbjct: 335  LWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVD 394

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG L +A  F+  MP KP+A IW ALLG+CRIH ++E  E   + L +++P  S +
Sbjct: 395  LLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGH 454

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y L+ N+ A +N+W+DV  +R  M + GV+    +S I+ID  VH F+     HP   +I
Sbjct: 455  YVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKI 514

Query: 969  YFELYHLV-SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
                  ++  ++K  GYV +T     DIDEEEK   L  H+EKLAI YG+MK ++  PIR
Sbjct: 515  ERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIR 574

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++KN RVC DCHTA K +S V   E+ +RD  RFHHF+EG CSC D W
Sbjct: 575  IVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 195/404 (48%), Gaps = 17/404 (4%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVES-----ANKLFSEVSDLEDDLLWNEIIMV 370
           +HA +++    FDV     L+ F   C D  +     A ++ S++ +  +  ++N +I  
Sbjct: 36  IHAHMLRTHLFFDVFAASRLIAF---CIDSTTNLLHYAIRVASQIQN-PNLFIYNALIRG 91

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
              +E  EN+   + +         + T   +++ACA++     G Q HG  +K   E +
Sbjct: 92  CSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQD 151

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
             V N L+ MY+    +  A  VF  M   ++ SW  MI+ Y   G    A  LF++M  
Sbjct: 152 FYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMP- 210

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
              + +++TW+ ++SG+  +  ++  +     +Q+ G   N + +  V+ +   L  L  
Sbjct: 211 ---ERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAM 267

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           G ++H Y++RN L  +L +GT+++DMY +   ++ A  VF+ +  ++++ W +LI+G   
Sbjct: 268 GEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAM 327

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVV 669
            G    A    ++M ++   P  +++ ++++  S  G  +  L I   MK + G+ P + 
Sbjct: 328 HGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLE 387

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +  ++    +    R++ KF ++M    +KPN+    +LL  C
Sbjct: 388 HYGCMVDLLGRAGKLRKAEKFVLKMP---VKPNAPIWRALLGAC 428



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 32/256 (12%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG------------------- 340
           ++K C +L    +G++ H   IK GF+ D +++ +L++ Y                    
Sbjct: 123 LVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFD 182

Query: 341 ------------KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
                       +C D +SA +LF  + +  + + W+ +I    RN  +E A++ F  +Q
Sbjct: 183 VVSWTCMIAGYHRCGDAKSARELFDRMPE-RNLVTWSTMISGYARNNCFEKAVETFEALQ 241

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                A    +V ++ +CA +GA   G++ H YV+++ L  NL +   ++ MY+R   +E
Sbjct: 242 AEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVE 301

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A  VF+ + + ++  W ++I+     GY + A   F++M      P  IT+  +L+   
Sbjct: 302 KAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACS 361

Query: 509 THGSYQNVLTLLRGMQ 524
             G  +  L +   M+
Sbjct: 362 HAGMVERGLEIFESMK 377


>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
          Length = 610

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/642 (33%), Positives = 344/642 (53%), Gaps = 54/642 (8%)

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY---TGLGYVDVAWSLFNKMNSSRIQ 494
            ++   R   L  A   F S +    +++N +++ Y   +GL  +  A  LF+ +      
Sbjct: 19   VAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIP----H 74

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            PD +++N LLS HF  G               G R   S++ V                 
Sbjct: 75   PDTVSYNTLLSCHFACGDID------------GARRVFSTMPV----------------- 105

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
                       D+    +++    KN   + A  +F  M  RN V+WN++++     G  
Sbjct: 106  ----------KDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDM 155

Query: 615  VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
              A+ +     E   K D + W ++VSGY   G  ++A+     M       N+V+W ++
Sbjct: 156  GAAEDLFRNAPE---KTDAILWTAMVSGYMDTGNVQKAMEFFGAMP----VRNLVSWNAV 208

Query: 675  ISGSLQNENYRESLKFFIQMQQEDI-KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            ++G ++N    ++L+ F  M ++ I +PN++T+SS+L  C  L  L  G+++H  C+K  
Sbjct: 209  VAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLP 268

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
              ++  V T L+ MY K G+L  A +VF + + K + +WN MI G+A +G G +AI LF 
Sbjct: 269  LSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFE 328

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            ++ + G  PD IT  A+L AC ++GL + G + F++M   Y I P I+HYSCMVDLL +A
Sbjct: 329  KMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRA 388

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L+ A + I +MPF+P  + +G LL +CR++ +LE+AE A+R+L + +P N+  Y  + 
Sbjct: 389  GLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLA 448

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A++N+W DV R+R  M +  V     +SW++I  + H F +    HP  G I+ +L 
Sbjct: 449  NIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLD 508

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L   MK +GYVPD      D+++  K ++L+ H+EKLAI +GL+ T     +R+ KN R
Sbjct: 509  RLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLR 568

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +C DCH AAK +S +  REI LRD  RFHHFR G CSC D W
Sbjct: 569  ICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 144/302 (47%), Gaps = 44/302 (14%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ +  C D++ A ++FS +  ++D   WN ++    +N   E A  +FR M   +A +
Sbjct: 83  LLSCHFACGDIDGARRVFSTMP-VKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVS 141

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
            +  +V  L     +GA  +       + ++A E   ++                     
Sbjct: 142 WN-AMVAALACSGDMGAAED-------LFRNAPEKTDAIL-------------------- 173

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
                     W +M+S Y   G V  A   F  M       ++++WN +++G+  +    
Sbjct: 174 ----------WTAMVSGYMDTGNVQKAMEFFGAMPVR----NLVSWNAVVAGYVKNSRAD 219

Query: 515 NVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
           + L + + M +    +PN S++S VL   + L  L +GR+ H + ++  L  ++ VGTSL
Sbjct: 220 DALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSL 279

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           + MY K   L +A +VFD M  ++IVAWN++ISGY   G  + A K+  +M++E + PD 
Sbjct: 280 LSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDW 339

Query: 634 VS 635
           ++
Sbjct: 340 IT 341



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 176/421 (41%), Gaps = 89/421 (21%)

Query: 435 NCLISMYSRNN---KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           NCL++ Y++ +   +L  A R+FDS+   +  S+N+++S +   G +D A  +F+ M   
Sbjct: 47  NCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVK 106

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               D+ +WN ++SG   +G+ +    + R M       N  S + ++ A+     +   
Sbjct: 107 ----DVTSWNTMVSGLSKNGASEEAAAMFRIMPVR----NAVSWNAMVAALACSGDMGAA 158

Query: 552 RESHGYILRNGLD-YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            +    + RN  +  D  + T+++  Y+    +Q A E F  M  RN+V+WN++++GY  
Sbjct: 159 ED----LFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVK 214

Query: 611 KGLFVNAKKMLNQMEEEEI-KPDLVS----------------------W----------- 636
                +A ++   M E+ I +P+  +                      W           
Sbjct: 215 NSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVT 274

Query: 637 --NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
              SL+S Y   G   +A  +   M       ++V W ++ISG  Q+    +++K F +M
Sbjct: 275 VGTSLLSMYCKCGDLNDACKVFDEMSTK----DIVAWNAMISGYAQHGGGMQAIKLFEKM 330

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
           + E + P+  T+ ++L  C   GL   G  I C       +++AY     ID YS     
Sbjct: 331 KDEGVVPDWITLLAVLTACIHTGLCDFG--IQCF----ETMQEAYKIEPQIDHYS----- 379

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
                              CM+      G  + A+ + H +    F+P    +  LL AC
Sbjct: 380 -------------------CMVDLLCRAGLLERAVNMIHSM---PFEPHPSAYGTLLTAC 417

Query: 815 K 815
           +
Sbjct: 418 R 418



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 96/180 (53%), Gaps = 2/180 (1%)

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           D  L  A+++ Y    +V+ A + F  +  + + + WN ++   ++N + ++A+++F+ M
Sbjct: 170 DAILWTAMVSGYMDTGNVQKAMEFFGAMP-VRNLVSWNAVVAGYVKNSRADDALRVFKTM 228

Query: 388 -QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
            + S  +  + T+  +L  C+ + A   G+Q+H + +K  L  N++V   L+SMY +   
Sbjct: 229 VEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGD 288

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           L  A +VFD M   ++ +WN+MIS Y   G    A  LF KM    + PD IT   +L+ 
Sbjct: 289 LNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTA 348



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 119/256 (46%), Gaps = 8/256 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y++ G+   A + F     R+   W++ +  Y        + L V+  +    ++
Sbjct: 176 AMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVK-NSRADDALRVFKTMVEDSIV 234

Query: 292 -FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
              +  L+ +L  C+ L A   G +VH   +K     +V +  +L++ Y KC D+  A K
Sbjct: 235 QPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACK 294

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F E+S  +D + WN +I    ++     AIKLF +M+         T++ +L AC   G
Sbjct: 295 VFDEMS-TKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTG 353

Query: 411 AFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
               G Q    + ++  +E  +   +C++ +  R   LE A  +  SM  + + S++ ++
Sbjct: 354 LCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTL 413

Query: 469 ISS---YTGLGYVDVA 481
           +++   Y  L + + A
Sbjct: 414 LTACRVYKNLEFAEFA 429


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/588 (35%), Positives = 334/588 (56%), Gaps = 37/588 (6%)

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            G+Q L     G   SV+ + +++   ++ G+  H ++++   +  +Y+ T L+ +Y K  
Sbjct: 469  GIQGLEVEFQGYD-SVLTECISQT-AIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 526

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV- 640
            CL +A+ V D M  RN+V+W ++ISGY  +G    A  +  +M      P+  ++ +++ 
Sbjct: 527  CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 586

Query: 641  -----SGYSIWGQSKEALVI-----IHHMKNSGIYP---------------------NVV 669
                 SG+ + G+   +LVI      H    S +                       +VV
Sbjct: 587  SCTSSSGFQL-GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVV 645

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            + T++ISG  Q     E+L  F ++Q+E ++ N  T +S+L    GL  L +G+++H   
Sbjct: 646  SCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV 705

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            L+        +   LIDMYSK G+L  +R +F     +T+ SWN M++G++ +G G+EA+
Sbjct: 706  LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 765

Query: 790  LLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN-IIPTIEHYSCMV 847
             LF  + E    +PD++TF A+L+ C + G+ + G + F  M    +   P IEHY C+V
Sbjct: 766  ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 825

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DL G+AG ++EA++FI+ MPF+P A IWG+LLG+CR+H ++   E  +RRL ++E  N+ 
Sbjct: 826  DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAG 885

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            NY ++ NL A + RW+DV  +R  M E  V      SWI++DQ +H F A    HP   E
Sbjct: 886  NYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEE 945

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            ++ ++  L  ++K+ GYVP+  CV  D+D+E+K K+L  H+EKLA+ +GL+ T    P+R
Sbjct: 946  VFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVR 1005

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +IKN R+C DCH  AK++S V GRE+ LRD  RFHH   G CSC D W
Sbjct: 1006 IIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 197/417 (47%), Gaps = 42/417 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L  C    A   G  VHA +IK  ++  V+L+  L+  Y KCR +  A ++  E+ +  
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE-R 541

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +I    +      A+ LF EM  S       T   +L +C     F  G+QIH
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             V+K++ ES++ V + L+ MY++  K+  A RVFD + + ++ S  ++IS Y  LG  +
Sbjct: 602 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 661

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  LF                                   R +Q  G R N  + + VL
Sbjct: 662 EALDLF-----------------------------------RRLQREGMRSNYVTYASVL 686

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A++ L  L +GR+ H ++LR  L + + +  SL+DMY K   L  ++ +FD+M  R ++
Sbjct: 687 TALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVI 746

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           +WN+++ GY   GL   A ++   M+EE ++KPD V++ +++SG S  G     L I + 
Sbjct: 747 SWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYE 806

Query: 659 MKN--SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           M N   G  P +  +  ++    +     E+ +F  +M  E   P +    SLL  C
Sbjct: 807 MVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFE---PTAAIWGSLLGAC 860



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 185/435 (42%), Gaps = 78/435 (17%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L  C    A  EG+++H +++K+  E  + +   LI +Y++   L  A RV D M + N
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                              +++W  ++SG+   G     L L  
Sbjct: 543 -----------------------------------VVSWTAMISGYSQRGYASEALHLFV 567

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M   G  PN  + + VL + T     + GR+ H  +++   +  ++VG+SL+DMY K  
Sbjct: 568 EMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAG 627

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW----- 636
            +  A+ VFD +  R++V+  ++ISGY   GL   A  +  +++ E ++ + V++     
Sbjct: 628 KICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 687

Query: 637 ------------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                                         NSL+  YS  G    +  I   M       
Sbjct: 688 ALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPER---- 743

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            V++W +++ G  ++   RE+++ F  M++E+ +KP+S T  ++L  C   G+   G EI
Sbjct: 744 TVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEI 803

Query: 726 --HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIY 782
               +  K+GF  +      ++D++ ++G ++ A E  +K     T A W  ++    ++
Sbjct: 804 FYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 863

Query: 783 GNGKEAILLFHELLE 797
            N      +   LLE
Sbjct: 864 QNVHIGEFVARRLLE 878



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 5/278 (1%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R+   W++ +  Y S  G   E L ++ E+   G          +L  CT    F LG +
Sbjct: 541 RNVVSWTAMISGY-SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H+ +IK  F+  + +  +L++ Y K   +  A ++F  + +  D +    II    +  
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE-RDVVSCTAIISGYAQLG 658

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             E A+ LFR +Q    ++   T   +L A + + A   G+Q+H +VL++ L   + + N
Sbjct: 659 LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 718

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-SSRIQ 494
            LI MYS+   L  + R+FDSM +  + SWN+M+  Y+  G    A  LF  M   ++++
Sbjct: 719 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 778

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRP 530
           PD +T+  +LSG    G     L +   M  Q  GF P
Sbjct: 779 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 4/187 (2%)

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
           N   +E+L   ++M  + ++       S+L  C     ++ G+ +H   +K  +    Y+
Sbjct: 458 NRQLKEAL---LEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYL 514

Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
            T LI +Y+K   L  AR V  +   + + SW  MI G++  G   EA+ LF E+L +G 
Sbjct: 515 RTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGT 574

Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            P+  TF  +L +C +S   + G +   S+    +    I   S ++D+  KAG + EA 
Sbjct: 575 APNEFTFATVLTSCTSSSGFQLG-RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEAR 633

Query: 861 DFIRTMP 867
                +P
Sbjct: 634 RVFDGLP 640


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 245/837 (29%), Positives = 415/837 (49%), Gaps = 79/837 (9%)

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G+++E +++   +    V     +   +++LC    A   G +V++  +       V L 
Sbjct: 73   GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF-SS 391
             A +  + +  ++  A  +F ++S+  +   WN ++    +   ++ A+ L+  M +   
Sbjct: 133  NAFLAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
             K    T   +L+ C  +     GK++H +V++   E ++ V N LI+MY +        
Sbjct: 192  VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK-------- 243

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
                                    G V  A  LF++M     + DII+WN ++SG+F +G
Sbjct: 244  -----------------------CGDVKSARLLFDRMP----RRDIISWNAMISGYFENG 276

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                 L L   M+ L   P+  +++ V+ A   L   + GR+ H Y++  G   D+ V  
Sbjct: 277  MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            SL  MY+     + A+++F  M+ ++IV+W ++ISGY +  L   A      M+++ +KP
Sbjct: 337  SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396

Query: 632  D-------------------------------LVSW----NSLVSGYSIWGQSKEALVII 656
            D                               L+S+    N+L++ YS      +AL I 
Sbjct: 397  DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            H++       NV++WTS+I+G   N    E+L F  QM+   ++PN+ T+++ L  C  +
Sbjct: 457  HNIPRK----NVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARI 511

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
            G L  GKEIH   L+ G   D ++   L+DMY + G + +A   F  S  K + SWN ++
Sbjct: 512  GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILL 570

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G++  G G   + LF  ++++  +PD ITF +LL  C  S +V +G  YF  M  DY +
Sbjct: 571  TGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGV 629

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P ++HY+C+VDLLG+AG L EA  FI+ MP  PD  +WGALL +CRIH  ++  E++++
Sbjct: 630  TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQ 689

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             +F+L+  +   Y L+ NL A   +W +V ++R  M E G+      SW+++   VH F 
Sbjct: 690  HIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFL 749

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            ++   HP T EI   L     +M ++G    +     D  E  + ++   H+E+ AI +G
Sbjct: 750  SDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFG 809

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            L+ T    PI V KN  +C +CH   K++S    REI +RD   FHHF++GECSC D
Sbjct: 810  LINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/578 (24%), Positives = 241/578 (41%), Gaps = 110/578 (19%)

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N K E A+KL   MQ           V +++ C    A  EG +++   L S     + +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-SSR 492
            N  ++M+ R   L  A  VF  M + NL SWN ++  Y   GY D A  L+++M     
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++PD+ T+ C+L                   ++ G  P+                L  G+
Sbjct: 192 VKPDVYTFPCVL-------------------RTCGGIPD----------------LARGK 216

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           E H +++R G + D+ V  +L+ MYVK   +++A+ +FD M  R+I++WN++ISGY   G
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG--------- 663
           +     ++   M    + PDL++  S++S   + G  +    I  ++  +G         
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336

Query: 664 ----IYPN------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
               +Y N                  +V+WT++ISG   N    +++  +  M Q+ +KP
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +  T++++L  C  LG L  G E+H L +K   I    VA  LI+MYSK   +  A ++F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL-------------------------- 795
                K + SW  +I G  +     EA++   ++                          
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMC 516

Query: 796 --------LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD---YNIIPTIEHYS 844
                   L TG   D     ALL      G +   W  F+S   D   +NI+ T   YS
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTSWNILLT--GYS 574

Query: 845 CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
                 G+   + E +D +     +PD   + +LL  C
Sbjct: 575 ----ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 240/519 (46%), Gaps = 45/519 (8%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYF 254
           C L        L+  K  H  +++ G  +  D D+V +LI  Y++ GD  SA   F    
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYG--YELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            R    W++ +  Y    G   E LE++  + G  V      LT ++  C  L    LG 
Sbjct: 259 RRDIISWNAMISGYFE-NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +I  GF  D+ +  +L   Y        A KLFS + + +D + W  +I     N
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDIVSWTTMISGYEYN 376

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              + AI  +R M   S K    T+  +L ACA +G    G ++H   +K+ L S + V 
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI+MYS+   ++ A  +F ++   N+ SW S+I+   GL           ++N+    
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA---GL-----------RLNN---- 478

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
                  C              L  LR M+ +  +PN  +++  L A   +  L  G+E 
Sbjct: 479 ------RCF-----------EALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEI 520

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H ++LR G+  D ++  +L+DMYV+   +  A   F++ K +++ +WN L++GY  +G  
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQG 579

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
               ++ ++M +  ++PD +++ SL+ G S     ++ L+    M++ G+ PN+  +  +
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACV 639

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +    +    +E+ KF   +Q+  + P+     +LL  C
Sbjct: 640 VDLLGRAGELQEAHKF---IQKMPVTPDPAVWGALLNAC 675



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 130/561 (23%), Positives = 225/561 (40%), Gaps = 75/561 (13%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           ++ FG+   A   F     R+   W+  +  Y   G   + +      L   GV      
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              +L+ C  +     G EVH  +++ G++ D+ +  AL+  Y KC DV+SA  LF  + 
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
              D + WN +I     N      ++LF  M+  S      T+  ++ AC  +G    G+
Sbjct: 259 R-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            IH YV+ +    ++SVCN L  MY        A ++F  M+  ++ SW +MIS Y    
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             D A   +  M+   ++PD IT                                   V+
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEIT-----------------------------------VA 402

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL A   L  L  G E H   ++  L   + V  +L++MY K  C+  A ++F N+  +
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462

Query: 597 NIVAWNSLISGY-----CFKGL-FVNAKKMLNQ-------------------MEEEEIKP 631
           N+++W S+I+G      CF+ L F+   KM  Q                   M  +EI  
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHA 522

Query: 632 DLVSW---------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
            ++           N+L+  Y   G+   A    +  K      +V +W  L++G  +  
Sbjct: 523 HVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK-----DVTSWNILLTGYSERG 577

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
                ++ F +M +  ++P+  T  SLL  C    +++ G          G   +     
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYA 637

Query: 743 GLIDMYSKSGNLKSAREVFRK 763
            ++D+  ++G L+ A +  +K
Sbjct: 638 CVVDLLGRAGELQEAHKFIQK 658



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 3/206 (1%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           + G   N    E++K    MQ+  +  +     +L++ C      + G +++ + L +  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                +    + M+ + GNL  A  VF K + + L SWN ++ G+A  G   EA+ L+H 
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 795 LLET-GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
           +L   G +PD  TF  +L  C     +  G K        Y     I+  + ++ +  K 
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARG-KEVHVHVVRYGYELDIDVVNALITMYVKC 244

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALL 879
           G +  A      MP + D   W A++
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMI 269


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/575 (34%), Positives = 319/575 (55%), Gaps = 40/575 (6%)

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            + +L+  T  +LL  GR  H +IL++   +D+ +G +L++MY K   L+ A++VF+ M  
Sbjct: 64   NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG------------- 642
            R+ V W +LISGY       +A    NQM      P+  + +S++               
Sbjct: 124  RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 643  ----------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                                  Y+ +G   +A ++   +++     N V+W +LI+G  +
Sbjct: 184  HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHAR 239

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
                 ++L+ F  M ++  +P+  + +SL   C   G L+ GK +H   +K+G    A+ 
Sbjct: 240  RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
               L+DMY+KSG++  AR++F + A + + SWN ++  +A +G GKEA+  F E+   G 
Sbjct: 300  GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ I+F ++L AC +SGL++EGW Y++ M  D  I+P   HY  +VDLLG+AG L+ A 
Sbjct: 360  RPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRAL 418

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
             FI  MP +P A IW ALL +CR+H + E    A+  +F+L+P +   + ++ N+ A   
Sbjct: 419  RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RW D  R+R  M E GVK     SW++I+  +H+F A    HP   EI  +   +++++K
Sbjct: 479  RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            +LGYVPDT  V   +D++E+   L  H+EK+A+ + L+ T   + I + KN RVC DCHT
Sbjct: 539  ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHT 598

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            A K  S V GREI +RD  RFHHF++G CSC D W
Sbjct: 599  AIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 197/430 (45%), Gaps = 39/430 (9%)

Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
           +L G  +    R    +LK CT       G  VHA +++  F  D+ +   L+N Y KC 
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            +E A K+F ++    D + W  +I    ++++  +A+  F +M          T+  ++
Sbjct: 110 SLEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +A A       G Q+HG+ +K   +SN+ V + L+ +Y+R                    
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR-------------------- 208

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                       G +D A  +F+ + S     + ++WN L++GH      +  L L +GM
Sbjct: 209 -----------YGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGM 253

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
              GFRP+  S + +  A +    L+ G+  H Y++++G     + G +L+DMY K+  +
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            +A+++FD +  R++V+WNSL++ Y   G    A     +M    I+P+ +S+ S+++  
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
           S  G   E       MK  GI P    + +++    +  +   +L+F  +M    I+P +
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTA 430

Query: 704 TTMSSLLQTC 713
               +LL  C
Sbjct: 431 AIWKALLNAC 440



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 196/431 (45%), Gaps = 67/431 (15%)

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           +++ S   A  R    +L+ C       +G+ +H ++L+S    ++ + N L++MY++  
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK-- 107

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
                                         G ++ A  +F KM     Q D +TW  L+S
Sbjct: 108 -----------------------------CGSLEEARKVFEKMP----QRDFVTWTTLIS 134

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
           G+  H    + L     M   G+ PN  ++S V++A    R    G + HG+ ++ G D 
Sbjct: 135 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           +++VG++L+D+Y +   + +AQ VFD +++RN V+WN+LI+G+  +     A ++   M 
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254

Query: 626 EEEIKPDLVSWNSLVSGYSIWG-------------QSKEALVIIH-------HMKNSGIY 665
            +  +P   S+ SL    S  G             +S E LV          + K+  I+
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314

Query: 666 P-----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
                       +VV+W SL++   Q+   +E++ +F +M++  I+PN  +  S+L  C 
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374

Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWN 773
             GLL  G   + L  K+G + +A+    ++D+  ++G+L  A R +       T A W 
Sbjct: 375 HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 434

Query: 774 CMIMGFAIYGN 784
            ++    ++ N
Sbjct: 435 ALLNACRMHKN 445



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 145/287 (50%), Gaps = 8/287 (2%)

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           +N+L+       L +  + +   + +   + D+V  N+L++ Y+  G  +EA  +   M 
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                 + VTWT+LISG  Q++   ++L FF QM +    PN  T+SS+++         
Sbjct: 123 QR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
            G ++H  C+K GF  + +V + L+D+Y++ G +  A+ VF    ++   SWN +I G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-WKYFDSMSTDYNIIPT 839
                ++A+ LF  +L  GF+P   ++ +L  AC ++G +E+G W +   + +   ++  
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
               + ++D+  K+G + +A      +  K D   W +LL +   HG
Sbjct: 299 AG--NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHG 342



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/514 (21%), Positives = 213/514 (41%), Gaps = 56/514 (10%)

Query: 164 PNSITNSPTSLALPPTDTLAKQA----QLSCISSGFCFLNETNK----FRCLSSVKSKHA 215
           P S  +   SL  P  D L + +    + S I +   F N   K    F+ L   +  HA
Sbjct: 25  PVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHA 84

Query: 216 QMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
            +++   I+  D  M  +L+  Y + G    A K F     R +  W++ +  Y      
Sbjct: 85  HILQ--SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP 142

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
              LL  + ++   G       L+ ++K          G ++H   +K GFD +VH+  A
Sbjct: 143 CDALL-FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ Y +   ++ A  +F  +    +D+ WN +I    R    E A++LF+ M     + 
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALES-RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP 260

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              +   +  AC+  G   +GK +H Y++KS  +      N L+ MY+++  +  A ++F
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D +   ++ SWNS++++Y   G+   A   F +M                          
Sbjct: 321 DRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM-------------------------- 354

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                    + +G RPN  S   VL A +   LL  G   +  + ++G+  + +   +++
Sbjct: 355 ---------RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVV 405

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVA-WNSLISG---YCFKGLFVNAKKMLNQMEEEEIK 630
           D+  +   L  A    + M      A W +L++    +    L   A + + +++ ++  
Sbjct: 406 DLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPG 465

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           P ++ +N   SG    G+  +A  +   MK SG+
Sbjct: 466 PHVILYNIYASG----GRWNDAARVRKKMKESGV 495


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 866

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 245/837 (29%), Positives = 415/837 (49%), Gaps = 79/837 (9%)

Query: 273  GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            G+++E +++   +    V     +   +++LC    A   G +V++  +       V L 
Sbjct: 73   GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELG 132

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF-SS 391
             A +  + +  ++  A  +F ++S+  +   WN ++    +   ++ AI L+  M +   
Sbjct: 133  NAFLAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
             K    T   +L+ C  +     G+++H +V++   E ++ V N LI+MY +        
Sbjct: 192  VKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVK-------- 243

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
                                    G V  A  LF++M     + DII+WN ++SG+F +G
Sbjct: 244  -----------------------CGDVKSARLLFDRMP----RRDIISWNAMISGYFENG 276

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                 L L   M+ L   P+  +++ V+ A   L   + GR+ H Y++  G   D+ V  
Sbjct: 277  MGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            SL  MY+     + A+++F  M  ++IV+W ++ISGY +  L   A      M+++ +KP
Sbjct: 337  SLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKP 396

Query: 632  D-------------------------------LVSW----NSLVSGYSIWGQSKEALVII 656
            D                               L+S+    N+L++ YS      +AL I 
Sbjct: 397  DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            H++       NV++WTS+I+G   N    E+L FF QM+   ++PN+ T+++ L  C  +
Sbjct: 457  HNIPRK----NVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACARI 511

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
            G L  GKEIH   L+ G   D ++   L+DMY + G +  A   F  S  K ++SWN ++
Sbjct: 512  GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQF-NSQKKDVSSWNILL 570

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G++  G G   + LF  +++   +PD ITF +LL  C  S +V +G  YF  M  +Y +
Sbjct: 571  TGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKME-EYGV 629

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P ++HY+C+VDLLG+AG L EA  FI+ MP  PD  +WGALL +CRIH +++  E++++
Sbjct: 630  TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQ 689

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            R+F+L+  +   Y L+ NL A   +W +V ++R  M E G+      SW+++   VH F 
Sbjct: 690  RIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFL 749

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            ++   HP T EI   L     +M ++G    +     D  E  + ++   H+E+ AI +G
Sbjct: 750  SDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERKAIAFG 809

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            L+ +    PI V KN  +C  CH   K++S    REI +RD   FHHF++GECSC D
Sbjct: 810  LINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSCGD 866



 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 241/578 (41%), Gaps = 110/578 (19%)

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N K E A+KL   MQ           V +++ C    A  EG +++   L S    ++ +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-SSR 492
            N  ++M+ R   L  A  VF  M + NL SWN ++  Y   GY D A  L+++M     
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++PD+ T+ C+L                   ++ G  P+                L  GR
Sbjct: 192 VKPDVYTFPCVL-------------------RTCGGIPD----------------LARGR 216

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           E H +++R G + D+ V  +L+ MYVK   +++A+ +FD M  R+I++WN++ISGY   G
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY------- 665
           +     K+   M    + PDL++  S++S   + G  +    I  ++  +G         
Sbjct: 277 MGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336

Query: 666 ------------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
                                    ++V+WT++ISG   N    +++  +  M Q+ +KP
Sbjct: 337 SLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKP 396

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           +  T++++L  C  LG L  G E+H L +K   I    VA  LI+MYSK   +  A ++F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL-------------------------- 795
                K + SW  +I G  +     EA++ F ++                          
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTLQPNAITLTAALAACARIGALMC 516

Query: 796 --------LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD---YNIIPTIEHYS 844
                   L TG   D     ALL      G +   W  F+S   D   +NI+ T   YS
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQKKDVSSWNILLT--GYS 574

Query: 845 CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
                 G+   + E +D +     +PD   + +LL  C
Sbjct: 575 ----ERGQGSVVVELFDRMVKARVRPDEITFISLLCGC 608



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 237/519 (45%), Gaps = 45/519 (8%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYF 254
           C L        L+  +  H  +++ G  +  D D+V +LI  Y++ GD  SA   F    
Sbjct: 201 CVLRTCGGIPDLARGREVHVHVVRYG--YELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            R    W++ +  Y    G   E L+++  + G  V      LT ++  C  L    LG 
Sbjct: 259 RRDIISWNAMISGYFE-NGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +I  GF  D+ +  +L   Y        A KLFS + D +D + W  +I     N
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM-DCKDIVSWTTMISGYEYN 376

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
              E AI  +R M   S K    T+  +L ACA +G    G ++H   +K+ L S + V 
Sbjct: 377 FLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI+MYS+   ++ A  +F ++   N+ SW S+I+   GL           ++N+   +
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA---GL-----------RLNNRCFE 482

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
                                 L   R M+ +  +PN  +++  L A   +  L  G+E 
Sbjct: 483 ---------------------ALIFFRQMK-MTLQPNAITLTAALAACARIGALMCGKEI 520

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H ++LR G+  D ++  +L+DMYV+   +  A   F++ K +++ +WN L++GY  +G  
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLTGYSERGQG 579

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
               ++ ++M +  ++PD +++ SL+ G       ++ L+    M+  G+ PN+  +  +
Sbjct: 580 SVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACV 639

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +    +    +E+ KF   +Q+  + P+     +LL  C
Sbjct: 640 VDLLGRAGELQEAHKF---IQKMPVTPDPAVWGALLNAC 675



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 146/636 (22%), Positives = 247/636 (38%), Gaps = 108/636 (16%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           ++ FG+   A   F     R+   W+  +  Y   G   + +      L   GV      
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYT 198

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              +L+ C  +     G EVH  +++ G++ D+ +  AL+  Y KC DV+SA  LF  + 
Sbjct: 199 FPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
              D + WN +I     N      +KLF  M+  S      T+  ++ AC  +G    G+
Sbjct: 259 R-RDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            IH YV+ +    ++SVCN L  MY        A ++F  M   ++ SW +MIS Y    
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNF 377

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A   +  M+   ++PD IT                                   V+
Sbjct: 378 LPEKAIDTYRMMDQDSVKPDEIT-----------------------------------VA 402

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL A   L  L  G E H   ++  L   + V  +L++MY K  C+  A ++F N+  +
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462

Query: 597 NIVAWNSLISGY-----CFKGL-FVNAKKMLNQ-------------------MEEEEIKP 631
           N+++W S+I+G      CF+ L F    KM  Q                   M  +EI  
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHA 522

Query: 632 DL--------------------------VSWNS-------------LVSGYSIWGQSKEA 652
            +                          ++WN              L++GYS  GQ    
Sbjct: 523 HVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVV 582

Query: 653 LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
           + +   M  + + P+ +T+ SL+ G  +++  R+ L +F +M++  + PN    + ++  
Sbjct: 583 VELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDL 642

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK----SAREVFRKSANKT 768
            G  G LQ   E H    K     D  V   L++      N+     SA+ +F      +
Sbjct: 643 LGRAGELQ---EAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKG-S 698

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           +  +  +   +A  G  +E   +   + E G   DA
Sbjct: 699 VGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA 734



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 3/206 (1%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           + G   N    E++K    MQ+  +  +     +L++ C      + G +++ + L +  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                +    + M+ + GNL  A  VF K + + L SWN ++ G+A  G   EAI L+H 
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 795 LLET-GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
           +L   G +PD  TF  +L  C     +  G +        Y     I+  + ++ +  K 
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARG-REVHVHVVRYGYELDIDVVNALITMYVKC 244

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALL 879
           G +  A      MP + D   W A++
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMI 269


>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 632

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/584 (36%), Positives = 316/584 (54%), Gaps = 42/584 (7%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS--SVSVVLQAVTELRLLKYGR 552
            P+I  +N LL     H ++   ++       L   PN    + + VL+A   L  +  G+
Sbjct: 88   PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQ 147

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H ++ + G + +L+V  SL+D+Y K  C   AQ++FD M  R                
Sbjct: 148  KVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR---------------- 191

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                               D+VSWN+L+SGY   G   +A ++   M    +  N+V+W+
Sbjct: 192  -------------------DVVSWNTLISGYCFSGMVDKARMVFDGM----MEKNLVSWS 228

Query: 673  SLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            ++ISG  +NE Y ++++ F QMQ E  + PN  T+ S+L  C  LG L  GK IH    +
Sbjct: 229  TMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRR 288

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            N      ++   L DMY+K G +  A+ VF +   + + SW+ +IMG A+YG   EA   
Sbjct: 289  NKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNF 348

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F E++E G +P+ I+F  LL AC ++GLV++G +YFD M   Y I P IEHY C+VDLL 
Sbjct: 349  FAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLS 408

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG LD+A   I +MP +P+  +WGALLG CRI+   E  E    R+ +L+  +S +   
Sbjct: 409  RAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVY 468

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ A   R +D    R  M +         SWI+I+  V+ F    + HP +  IY  
Sbjct: 469  LANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSM 528

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            +  L  +MK  GY P T  V  +IDEEEK   L +H+EKLA+ +GL+ T     IR++KN
Sbjct: 529  IRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKN 588

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVC+DCH A K +S +  REI +RD +RFHHF++G+CSCND W
Sbjct: 589  LRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 178/372 (47%), Gaps = 21/372 (5%)

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF--SSAKAISRTIVKMLQACAK 408
           +F+      +   +N ++    ++  W   I  F       ++      T   +L+ACA 
Sbjct: 80  IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +    EG+++H +V K   ESNL V N L+ +Y +     +A ++FD M   ++ SWN++
Sbjct: 140 LAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTL 199

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLG 527
           IS Y   G VD A  +F+ M    ++ ++++W+ ++SG+  +  Y + + L R MQ   G
Sbjct: 200 ISGYCFSGMVDKARMVFDGM----MEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGG 255

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             PN  ++  VL A   L  L  G+  H +I RN ++  L++G +L DMY K  C+  A+
Sbjct: 256 LAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAK 315

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            VF  M  R++++W+ +I G    G    A     +M E+ ++P+ +S+  L++  +  G
Sbjct: 316 GVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAG 375

Query: 648 QSKEALVIIHHMKNS-GIYPNVVTWTSLI-----SGSLQNENYRESLKFFIQMQQEDIKP 701
              + L     M    GI P +  +  ++     +G L      ESL   + MQ     P
Sbjct: 376 LVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQA---ESLINSMPMQ-----P 427

Query: 702 NSTTMSSLLQTC 713
           N     +LL  C
Sbjct: 428 NVIVWGALLGGC 439



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 31/241 (12%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK--------------- 341
            T +LK C  L     G +VH  + K G + ++ ++ +L++ Y K               
Sbjct: 130 FTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMV 189

Query: 342 CRDVESANKL-----FSEVSD---------LEDDLL-WNEIIMVKLRNEKWENAIKLFRE 386
            RDV S N L     FS + D         +E +L+ W+ +I    RNEK+ +AI+LFR+
Sbjct: 190 VRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQ 249

Query: 387 MQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           MQ     A +  T+V +L ACA +GA   GK IH ++ ++ +E  L + N L  MY++  
Sbjct: 250 MQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCG 309

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            +  A  VF  M + ++ SW+ +I      GY + A++ F +M    ++P+ I++  LL+
Sbjct: 310 CVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLT 369

Query: 506 G 506
            
Sbjct: 370 A 370



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/386 (19%), Positives = 163/386 (42%), Gaps = 79/386 (20%)

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
           I P++++    +   S  G  + +++I +H  +   +PN+  + +L+    Q+  +  ++
Sbjct: 55  IDPNIIAV-KFIGVSSSHGNLRHSVLIFNHFLS---FPNIFAYNALLKAFSQHNAWHTTI 110

Query: 689 KFFIQ--MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            +F    +      P+  T +S+L+ C GL  +  G+++HC   K G   + +V   L+D
Sbjct: 111 SYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVD 170

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-------- 798
           +Y K G    A+++F +   + + SWN +I G+   G   +A ++F  ++E         
Sbjct: 171 LYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTM 230

Query: 799 ------------------------GFQPDAITFTALLAACKNSGLVEEG-W--KYFDSMS 831
                                   G  P+ +T  ++L+AC + G ++ G W  ++     
Sbjct: 231 ISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNK 290

Query: 832 TDYNII---------------------------PTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            +  +                              +  +S ++  L   GY +EA++F  
Sbjct: 291 IEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFA 350

Query: 865 TM---PFKPDATIWGALLGSCRIHG----HLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            M     +P+   +  LL +C   G     LEY ++   +++ + P    +Y  +++LL+
Sbjct: 351 EMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMP-QVYGITP-KIEHYGCVVDLLS 408

Query: 918 MSNRWEDVERLRHSMDEVGVKSVLVW 943
            + R +  E L +SM      +V+VW
Sbjct: 409 RAGRLDQAESLINSMPM--QPNVIVW 432


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/679 (31%), Positives = 365/679 (53%), Gaps = 76/679 (11%)

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
            +V  LQACA+  +   GK++H +++K+ ++   S+ N LI+MY +   ++ A  +F+ + 
Sbjct: 6    LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              +  SW S++++        +  S+F  M     +QPD   + CL+             
Sbjct: 66   HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLV------------- 112

Query: 518  TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
                                  +A   L  +K G++ H   + + +  D  V +SL+DMY
Sbjct: 113  ----------------------KACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMY 150

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
             K       + VFD++ ++N +                                   SW 
Sbjct: 151  AKCGLPDIGRVVFDSISSKNSI-----------------------------------SWT 175

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            +++SGY+  G+  +A+ +   M       N+++WT+LISG +Q+ N+ +S   F++M+ +
Sbjct: 176  AMISGYAQSGRKLDAIQLFQKMP----VKNLLSWTALISGLVQSGNWVDSFYLFMEMRSK 231

Query: 698  DIK-PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
             I   +   +SS++     L +L  GK+IHCL +  G+    +V+  L+DMY+K  ++ +
Sbjct: 232  GIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLA 291

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A+++F +   + + SW  +I+G A +G  +EA+ L++ +L TG +P+ +TF  L+ AC +
Sbjct: 292  AKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSH 351

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
             GLV +G  +F+SM  DY I P+++HY+C++DLL ++G+L+EA + I+ MPFKPD   W 
Sbjct: 352  VGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWA 411

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            ALL +C  H +       +  L  L+P + + Y L+ N+ A +  WE V ++R  M  + 
Sbjct: 412  ALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAME 471

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            VK    +S I + +   VF A    HPA  EI+  L  L +EMKK GY+PDT  V  D++
Sbjct: 472  VKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLE 531

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            ++EK + L  H+E+LA+ YGL+K      + ++KN RVC DCHT  K++S++  REI +R
Sbjct: 532  QQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVR 591

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  R+HHF++G+CSCN+ W
Sbjct: 592  DANRYHHFKDGKCSCNNFW 610



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 231/495 (46%), Gaps = 37/495 (7%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L+ C +  +  +G ++H  +IK G D    L   L+N YGKC  ++ A  LF+++    D
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPH-RD 68

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            + W  I+    +       + +F  M +    +        +++ACA +GA  +GKQ+H
Sbjct: 69  PISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVH 128

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              + S +  +  V + L+ MY++    ++   VFDS+   N  SW +MIS Y   G   
Sbjct: 129 ATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKL 188

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR-PNGSSVSVV 538
            A  LF KM       ++++W  L+SG    G++ +   L   M+S G    +   +S +
Sbjct: 189 DAIQLFQKMPVK----NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSI 244

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           + A   L +L  G++ H  ++  G +  L+V  +L+DMY K   +  A+++F  M  R+I
Sbjct: 245 IGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDI 304

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           V+W S+I G    GL   A  + N+M    +KP+ V++  L+   S  G   +     + 
Sbjct: 305 VSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNS 364

Query: 659 M-KNSGIYPNVVTWTSLI-----SGSLQN-ENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           M K+ GI P++  +T L+     SG L+  EN  +++ F         KP+  T ++LL 
Sbjct: 365 MIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPF---------KPDEATWAALLS 415

Query: 712 TCGGLGLLQNGKEI--HCLCLKNG------FIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            C        G  +  H L LK         + + Y +  + +  SK   L +A EV   
Sbjct: 416 ACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEV--- 472

Query: 764 SANKTLASWNCMIMG 778
              K    ++C+++G
Sbjct: 473 ---KKEPGYSCIVLG 484



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 132/325 (40%), Gaps = 32/325 (9%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  H  +IK G I     +  +LI  Y + G    A   F     R    W+S L     
Sbjct: 23  KKLHCHIIKTG-IDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQ 81

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
                  L          G+     +   ++K C  L A   G +VHA+ I      D  
Sbjct: 82  ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDV 141

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSD------------------------------LED 360
           +K +L++ Y KC   +    +F  +S                               +++
Sbjct: 142 VKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKN 201

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV-KMLQACAKVGAFHEGKQIH 419
            L W  +I   +++  W ++  LF EM+      +   I+  ++ A A +     GKQIH
Sbjct: 202 LLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIH 261

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             V+    ES+L V N L+ MY++ + +  A ++F  M   ++ SW S+I      G  +
Sbjct: 262 CLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAE 321

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLL 504
            A SL+N+M S+ ++P+ +T+  L+
Sbjct: 322 EALSLYNRMLSTGLKPNEVTFVGLI 346



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 5/243 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGV- 290
           ++I  Y + G    A + F     ++   W++ +      G  V     ++ E+  KG+ 
Sbjct: 176 AMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFY-LFMEMRSKGID 234

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
           I    IL+ I+     L    LG ++H  +I  G++  + +  AL++ Y KC DV +A K
Sbjct: 235 IVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKK 294

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F  +    D + W  II+   ++   E A+ L+  M  +  K    T V ++ AC+ VG
Sbjct: 295 IFGRMVQ-RDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVG 353

Query: 411 AFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
              +G+     ++K   +  +L    CL+ + SR+  LE A  +  +M    + ++W ++
Sbjct: 354 LVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAAL 413

Query: 469 ISS 471
           +S+
Sbjct: 414 LSA 416


>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
 gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
          Length = 632

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/626 (36%), Positives = 324/626 (51%), Gaps = 55/626 (8%)

Query: 462  LSSWNSMIS---SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY---QN 515
            LSS N +I    ++        A +   K+  S  QPD   +N ++ G F H       +
Sbjct: 50   LSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTIIKG-FLHSQLLPTNS 108

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            +L L   M      PN  +   +L A    R +++G + H ++ + G         SL+ 
Sbjct: 109  ILLLYSHMLQNSVLPNNFTFPSLLIAC---RKIQHGMQIHAHLFKFGFGAHSVCLNSLIH 165

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            MYV    L+ A+ VF  + +                                   PD VS
Sbjct: 166  MYVTFQALEEARRVFHTIPH-----------------------------------PDSVS 190

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            W SL+SGYS WG   EA  I   M       N  +W ++++  +Q   + E+   F +M+
Sbjct: 191  WTSLISGYSKWGLIDEAFTIFQLMPQK----NSASWNAMMAAYVQTNRFHEAFALFDRMK 246

Query: 696  QEDIKP-NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
             E+    +    +++L  C GLG L  GK IH    +NG   D+ + T ++DMY K G L
Sbjct: 247  AENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCL 306

Query: 755  KSAREVFR--KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            + A +VF       + ++SWNCMI G A++GNG+ AI LF E+      PD ITF  LL 
Sbjct: 307  EKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLT 366

Query: 813  ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            AC +SGLVEEG  YF  M   Y I P +EH+ CMVDLLG+AG + EA   I  MP  PD 
Sbjct: 367  ACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDV 426

Query: 873  TIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
            T+ G LLG+C+ H ++E  E   RR+ +LEP NS  Y L+ NL A + +WED  ++R  M
Sbjct: 427  TVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLM 486

Query: 933  DEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVY 992
            D+ GVK    +S I++   VH F A    HP   E++ ++Y ++  +K +GYV DT  V 
Sbjct: 487  DDRGVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVL 546

Query: 993  --QDIDEEEKGK-VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
               D DEEE G+  L  H+EKLAI +GL +TK    +R++KN R+C DCH A K +S V 
Sbjct: 547  HGHDFDEEEDGENPLYYHSEKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVF 606

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
             REI +RD  RFH F+ G+CSC D W
Sbjct: 607  DREIIVRDRTRFHRFKMGQCSCQDYW 632



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 197/420 (46%), Gaps = 20/420 (4%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVES---ANKLFSEVSDLEDDLLWNEIIMVK 371
           + H+ +I+ G     HL   L+NF  +    ++   A KLF  +    D  L+N II   
Sbjct: 40  QYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQ-PDAFLYNTIIKGF 98

Query: 372 LRNE--KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
           L ++     + + L+  M  +S    + T   +L AC K+     G QIH ++ K    +
Sbjct: 99  LHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI---QHGMQIHAHLFKFGFGA 155

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           +    N LI MY     LE A RVF ++   +  SW S+IS Y+  G +D A+++F  M 
Sbjct: 156 HSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMP 215

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV-SVVLQAVTELRLL 548
               Q +  +WN +++ +     +     L   M++         V + +L A T L  L
Sbjct: 216 ----QKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGAL 271

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN--MKNRNIVAWNSLIS 606
             G+  H YI RNG++ D  + T+++DMY K  CL+ A +VF +  +  R I +WN +I 
Sbjct: 272 DQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIG 331

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIY 665
           G    G    A ++  +ME + + PD +++ +L++  +  G  +E      +M +  GI 
Sbjct: 332 GLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIE 391

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P +  +  ++    +     E+ K   +M    + P+ T + +LL  C     ++ G+EI
Sbjct: 392 PRMEHFGCMVDLLGRAGMVPEARKLIDEM---PVSPDVTVLGTLLGACKKHRNIELGEEI 448



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 148/345 (42%), Gaps = 49/345 (14%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
           K + +S ++  H+Q+I++G + + + ++  LI         TS A  + L    S     
Sbjct: 31  KCQSMSQLRQYHSQIIRLG-LSSHNHLIPPLINFCARAS--TSDALTYALKLFDSIPQPD 87

Query: 263 SFLEDYESFGGEVQELLE------VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           +FL +    G    +LL       ++  +    V+  +     +L  C K+     G+++
Sbjct: 88  AFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKIQH---GMQI 144

Query: 317 HASLIKRGFDFDVHLKC--ALMNFYGKCRDVESANKLFSEVSD----------------- 357
           HA L K  F F  H  C  +L++ Y   + +E A ++F  +                   
Sbjct: 145 HAHLFK--FGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWG 202

Query: 358 LEDDLL-------------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI-VKML 403
           L D+               WN ++   ++  ++  A  LF  M+  +   + + +   ML
Sbjct: 203 LIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTML 262

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN-- 461
            AC  +GA  +GK IH Y+ ++ +E +  +   ++ MY +   LE A +VF S+      
Sbjct: 263 SACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRW 322

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +SSWN MI      G  + A  LF +M   R+ PD IT+  LL+ 
Sbjct: 323 ISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTA 367



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 146/338 (43%), Gaps = 25/338 (7%)

Query: 621 LNQMEEEEIKPDLVSWNSLVS---GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
           L Q   + I+  L S N L+     +     + +AL     + +S   P+   + ++I G
Sbjct: 38  LRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTIIKG 97

Query: 678 SLQNE--NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            L ++       L  +  M Q  + PN+ T  SLL  C  +   Q+G +IH    K GF 
Sbjct: 98  FLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI---QHGMQIHAHLFKFGFG 154

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             +     LI MY     L+ AR VF    +    SW  +I G++ +G   EA  +F +L
Sbjct: 155 AHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIF-QL 213

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           +    Q ++ ++ A++AA   +    E +  FD M  + N +      + M+      G 
Sbjct: 214 MP---QKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGA 270

Query: 856 LDEA-W--DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN-SANYNL 911
           LD+  W  ++I+    + D+ +  A++      G LE A      L    PC   +++N 
Sbjct: 271 LDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSL--PLPCRWISSWNC 328

Query: 912 MMNLLAMSNRWE-------DVERLRHSMDEVGVKSVLV 942
           M+  LAM    E       ++ER R + D++   ++L 
Sbjct: 329 MIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLT 366



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 6/230 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGV- 290
           SLI  Y ++G    A   F L   ++ A W++ +  Y        E   ++  +  +   
Sbjct: 193 SLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQ-TNRFHEAFALFDRMKAENNN 251

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
           +    + T +L  CT L A   G  +H  + + G + D  L  A+++ Y KC  +E A +
Sbjct: 252 VLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQ 311

Query: 351 LFSEVSDLEDDLL--WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
           +F  +  L    +  WN +I     +   E AI+LF+EM+         T + +L ACA 
Sbjct: 312 VFHSLP-LPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAH 370

Query: 409 VGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            G   EG+    Y+++   +E  +    C++ +  R   +  A ++ D M
Sbjct: 371 SGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEM 420


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/694 (32%), Positives = 371/694 (53%), Gaps = 67/694 (9%)

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           GF+ D  +  +L+  Y +   +E A +LF ++ + +D +LWN ++   ++  +  +A+K+
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPN-KDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F +M+    K  S T   +L  CA       G Q+HG V+      +  V N L++MYS+
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
             +L       D++K                         LFN M  +    +++TWN +
Sbjct: 121 FGQLS------DALK-------------------------LFNTMPDT----NVVTWNGM 145

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           ++G   +G       L   M S G  P+  + +  L +VTE   LK G+E HGYILR+G+
Sbjct: 146 IAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGI 205

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D+++ ++L+D+Y K   +  A ++F    N +IV   ++ISGY   GL  +A ++   
Sbjct: 206 ALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRW 265

Query: 624 MEEEEIKPDLVSWNSLV---SGYSIWGQSKE--ALVIIHHMK-----NSGIY-------- 665
           + EE++ P+ V+  S++   +G +     KE  A ++ H +       S I         
Sbjct: 266 LLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGR 325

Query: 666 -------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                         + V W ++I+   QN   +E++  F QM +E +  +  ++S+ L  
Sbjct: 326 LDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSA 385

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
           C  L  L +GK IH   +K  F  + +  + LIDMY K GNL  AR VF     K   SW
Sbjct: 386 CANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSW 445

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
           N +I  +  +G+ + ++ LFH++LE G QPD +TF  +L+AC ++G V++G +YF  M+ 
Sbjct: 446 NSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTE 505

Query: 833 DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
           +Y I   +EHY+C+VDL G+AG L+EA++ I+ MPF PD  +WG LLG+CR+HG++E AE
Sbjct: 506 EYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAE 565

Query: 893 IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
           +ASR L  L+P NS  Y L+ N+ A + +W  V ++R  M + GV+ V  +SWI++++  
Sbjct: 566 VASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTT 625

Query: 953 HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
           H+F A    HP + +IY  L +L+ E++K GY P
Sbjct: 626 HMFVAADGSHPESAQIYSVLNNLLLELRKEGYCP 659



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 209/441 (47%), Gaps = 40/441 (9%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  +I  G  ++ D +V  +L+  Y +FG  + A K F      +   W+  +  +    
Sbjct: 96  HGLVISCG--FHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQ-N 152

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G + E   ++ E+   GV   S      L   T+  +   G E+H  +++ G   DV LK
Sbjct: 153 GFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLK 212

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KCRDV  A K+F + +++ D ++   II   + N    +A+++FR +     
Sbjct: 213 SALIDIYFKCRDVGMACKIFKQSTNV-DIVVCTAIISGYVLNGLNNDALEIFRWLLEEKM 271

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
              + T+  +L ACA +   + GK++H  +LK  L+    V + ++ MY++  +L+LA +
Sbjct: 272 SPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQ 331

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +F  M + +   WN++I+                              NC  +G      
Sbjct: 332 IFRRMPEKDAVCWNAIIT------------------------------NCSQNG-----K 356

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            Q  + L R M   G   +  S+S  L A   L  L +G+  H ++++   D +++  ++
Sbjct: 357 PQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESA 416

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+DMY K   L  A+ VFD M+ +N V+WNS+I+ Y   G    +  + ++M E+ I+PD
Sbjct: 417 LIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPD 476

Query: 633 LVSWNSLVSGYSIWGQSKEAL 653
            V++ +++S     GQ  + +
Sbjct: 477 HVTFLTILSACGHAGQVDKGI 497



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 136/599 (22%), Positives = 246/599 (41%), Gaps = 79/599 (13%)

Query: 224 WNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW 282
           +N D+ V  SLI  Y E G    A + F    ++    W+  L  +   G E    ++V+
Sbjct: 3   FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCG-EPNSAVKVF 61

Query: 283 GELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
            ++        S     +L +C        G ++H  +I  GF FD  +  AL+  Y K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
             +  A KLF+ + D  + + WN +I   ++N   + A  LF EM  +     S T    
Sbjct: 122 GQLSDALKLFNTMPD-TNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L +  +  +  +GK+IHGY+L+  +  ++ + + LI +Y +   + +A ++F    + ++
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
               ++IS Y           + N +N+                        + L + R 
Sbjct: 241 VVCTAIISGY-----------VLNGLNN------------------------DALEIFRW 265

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           +      PN  +++ VL A   L  L  G+E H  IL++GLD   +VG+++MDMY K   
Sbjct: 266 LLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGR 325

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------ 636
           L  A ++F  M  ++ V WN++I+     G    A  +  QM  E +  D VS       
Sbjct: 326 LDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSA 385

Query: 637 -----------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                        ++L+  Y   G    A  +   M+      N
Sbjct: 386 CANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREK----N 441

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IH 726
            V+W S+I+    + +   SL  F +M ++ I+P+  T  ++L  CG  G +  G +   
Sbjct: 442 EVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFR 501

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGN 784
           C+  + G          ++D++ ++G L  A E  +    +     W  ++    ++GN
Sbjct: 502 CMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGN 560



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 129/277 (46%), Gaps = 13/277 (4%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  HA ++K G   +    V S I   Y + G    A + F     +    W++ + +  
Sbjct: 295 KELHANILKHG--LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNC- 351

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G+ QE ++++ ++  +G+ +    ++  L  C  L A   G  +H+ +IK  FD +V
Sbjct: 352 SQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEV 411

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
             + AL++ YGKC ++  A  +F  + + ++++ WN II     +   E ++ LF +M  
Sbjct: 412 FAESALIDMYGKCGNLSVARCVFDMMRE-KNEVSWNSIIAAYGSHGHLEVSLALFHKMLE 470

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLE 448
              +    T + +L AC   G   +G Q    + +   + + +    C++ ++ R  +L 
Sbjct: 471 DGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLN 530

Query: 449 LATRVFDSMKDHNLSS----WNSMISSYTGLGYVDVA 481
            A   F+++K+   S     W +++ +    G V++A
Sbjct: 531 EA---FETIKNMPFSPDDGVWGTLLGACRVHGNVELA 564


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 236/747 (31%), Positives = 371/747 (49%), Gaps = 90/747 (12%)

Query: 343  RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
            R++E   K+  +++  +D + W  ++    +N     ++ +FR M     +  +  +VK+
Sbjct: 286  RNLEEGKKI-HKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKI 344

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            L A +++G F +   +HGYV++S   SN+ V   LI +YS+   L  A ++F  M   ++
Sbjct: 345  LAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDV 404

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKM--------------NSSRIQPDIITWNCLLSGHF 508
              W+SMI++Y   G    A  +F++M                 ++QP +   +C L+   
Sbjct: 405  VIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLA--- 461

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            TH  ++     +R      FR  G         +      +    S   I   GL YD  
Sbjct: 462  THIPWKVKAFYMRAH----FRWLGH-----FWEIFPTYPFQAADMSKSNIFAYGLQYDSR 512

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            + T    MYV  + +  A  VF                                   E+ 
Sbjct: 513  ILTKFAIMYVSFNRIDAASIVF-----------------------------------EDI 537

Query: 629  IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
              P    WN ++ G++  G+   +L +   M   G+ P+                     
Sbjct: 538  PNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPD--------------------- 576

Query: 689  KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
                      + PN  ++ S+L  CG LG L+ G+  H   ++ GF  D  VAT ++DMY
Sbjct: 577  -------NSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMY 629

Query: 749  SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
            SK G+L  AR +F ++A K L  W+ MI  + I+G+G++AI LF ++++ G +P  +TFT
Sbjct: 630  SKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFT 689

Query: 809  ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
             +L+AC +SGL+EEG  YF  M+ ++ I   + +Y+CMVDLLG+AG L EA D I  MP 
Sbjct: 690  CVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPV 749

Query: 869  KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
            +PDA+IWG+LLG+CRIH +L+ AE  +  LF L+P ++  + L+ N+ A  +RW +VE++
Sbjct: 750  EPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKV 809

Query: 929  RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            R  M   G   +  +S ++ D  VH F      HP   ++Y +L  L + MK LGYVP T
Sbjct: 810  RKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLT 869

Query: 989  RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLV 1048
              V  DI+EE K   L  H+E+LAI +GL+ T     +R+ KN R+C DCH A K +S +
Sbjct: 870  DFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKI 929

Query: 1049 RGREIFLRDGARFHHFREGECSCNDCW 1075
              R I +RD  RFH F +G CSC D W
Sbjct: 930  VNRVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/467 (22%), Positives = 199/467 (42%), Gaps = 103/467 (22%)

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
           + +V + QAC    +     Q+H  V K+ +  +      L S+Y++   L+ A +VFD 
Sbjct: 5   QVLVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDE 61

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
                                                 P++  WN  L  +     ++  
Sbjct: 62  TP-----------------------------------HPNVHLWNSTLRSYCREKQWEET 86

Query: 517 LTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLM 574
           L L   M  + G  P+  ++ + L+A   LR+L+ G+  HG+  +N  +  D++VG++L+
Sbjct: 87  LRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALV 146

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY--------------------CFKGLF 614
           ++Y K   +  A +VF+  +  + V W S+++GY                    CF G  
Sbjct: 147 ELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDL 206

Query: 615 VNAKKMLNQMEE---EEI---------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                +LN   +   E+I         + D++SW+++++ Y+    + EAL + H M   
Sbjct: 207 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 266

Query: 663 GIYPN-------------------------------VVTWTSLISGSLQNENYRESLKFF 691
              PN                               VV+W +L+SG  QN    +S+  F
Sbjct: 267 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVF 326

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             M  + I+P++  +  +L     LG+ Q    +H   +++GF  + +V   LI++YSK 
Sbjct: 327 RNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKC 386

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
           G+L  A ++F+    + +  W+ MI  + I+G G EA+ +F ++++ 
Sbjct: 387 GSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQV 433



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 128/308 (41%), Gaps = 75/308 (24%)

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H  + + G+ +D +  T L  +Y K   LQ A++VFD   + N+  WNS +  YC +  +
Sbjct: 24  HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQW 83

Query: 615 VNAKKMLNQM-------------------------------------EEEEIKPDLVSWN 637
               ++ + M                                     + +EI  D+   +
Sbjct: 84  EETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGS 143

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           +LV  YS  GQ  EAL +    +     P+ V WTS+++G  QN +  E+L  F QM   
Sbjct: 144 ALVELYSKCGQMGEALKVFEEFQR----PDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
           D                                   F  D  +   L+++Y+K+G  K A
Sbjct: 200 DC----------------------------------FDGDLPLVNSLLNLYAKTGCEKIA 225

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             +F K   K + SW+ MI  +A      EA+ LFHE++E  F+P+++T  + L AC  S
Sbjct: 226 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 285

Query: 818 GLVEEGWK 825
             +EEG K
Sbjct: 286 RNLEEGKK 293



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 152/338 (44%), Gaps = 49/338 (14%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY--ES 270
           H  +++ G  +NS+  V  SLI  Y + G    A K F     R    WSS +  Y    
Sbjct: 361 HGYVVRSG--FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHG 418

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRI-------LTIILKLCT-------KLMAF------ 310
            GGE  E+ +   ++  +G+    +I         + +  CT       K+ AF      
Sbjct: 419 RGGEALEIFDQMIQVM-QGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHF 477

Query: 311 -WLGV--EV------------HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
            WLG   E+             +++   G  +D  +       Y     +++A+ +F ++
Sbjct: 478 RWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDI 537

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-------TIVKMLQACAK 408
            +     LWN +I     + ++ ++++L+ +M     K  +        +I+ +L AC  
Sbjct: 538 PN-PCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGN 596

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +GA  +G+  H YV+++  E ++ V   ++ MYS+   L+LA  +FD     +L  W++M
Sbjct: 597 LGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAM 656

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           I+SY   G+   A  LF++M  + ++P  +T+ C+LS 
Sbjct: 657 IASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA 694



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 143/327 (43%), Gaps = 29/327 (8%)

Query: 224 WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL-EDYE---SF-------- 271
           + + DM KS IF Y    D     K   +Y S +  D +S + ED     SF        
Sbjct: 492 FQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 551

Query: 272 ---GGEVQELLEVWGELHGKG--------VIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
               G     LE++ ++  KG        +  R  IL+++L  C  L A   G   H+ +
Sbjct: 552 FATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLA-CGNLGALRKGEWFHSYV 610

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           I+ GF+FD+ +  A+M+ Y KC  ++ A  LF E +  +D + W+ +I     +     A
Sbjct: 611 IQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAG-KDLVCWSAMIASYGIHGHGRKA 669

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLIS 439
           I LF +M  +  +    T   +L AC+  G   EGK     + +   +   LS   C++ 
Sbjct: 670 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVD 729

Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           +  R  +L  A  + ++M  + + S W S++ +      +D+A  + + +    + P   
Sbjct: 730 LLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHL--FHLDPVHA 787

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            ++ LLS  +   S  N +  +R M +
Sbjct: 788 GYHVLLSNIYAAKSRWNEVEKVRKMMA 814



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 18/247 (7%)

Query: 705 TMSSLLQTCGGLGLLQNGK---EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +  L Q C       NG+   ++H    K G + D + AT L  +Y+K  +L++AR+VF
Sbjct: 6   VLVDLFQAC------NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITFTALLAACKNSGLV 820
            ++ +  +  WN  +  +      +E + LFH ++ T G  PD  T    L AC    ++
Sbjct: 60  DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           E G         +  I   +   S +V+L  K G + EA         +PD  +W +++ 
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVT 178

Query: 881 SCRIHGHLEYAEIASRRLFKLEPCNSAN---YNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
             + +   E A     ++  ++ C   +    N ++NL A +   +    L   M E   
Sbjct: 179 GYQQNNDPEEALALFSQMVMMD-CFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPE--- 234

Query: 938 KSVLVWS 944
           K V+ WS
Sbjct: 235 KDVISWS 241


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/635 (33%), Positives = 346/635 (54%), Gaps = 47/635 (7%)

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +LFN+      + D+ +WN +++     G     L     M+ L   P  SS    ++A 
Sbjct: 30   TLFNRYVD---KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            + L  +  G+++H      G   D++V ++L+ MY     L++A++VFD +  R+IV+W 
Sbjct: 87   SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWT 146

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------LVS------------------ 635
            S+I GY   G  ++A  +   +  +E   D         LVS                  
Sbjct: 147  SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206

Query: 636  --------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
                           N+L+  Y+  G+    + +   + +  +  + V++ S++S   Q+
Sbjct: 207  SFVIKRGFDRGVSVGNTLLDAYAKGGEG--GVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 682  ENYRESLKFFIQMQQEDIKP-NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
                E+ + F ++ +  +   N+ T+S++L      G L+ GK IH   ++ G   D  V
Sbjct: 265  GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
             T +IDMY K G +++AR+ F +  NK + SW  MI G+ ++G+  +A+ LF  ++++G 
Sbjct: 325  GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ ITF ++LAAC ++GL  EGW++F++M   + + P +EHY CMVDLLG+AG+L +A+
Sbjct: 385  RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
            D I+ M  KPD+ IW +LL +CRIH ++E AEI+  RLF+L+  N   Y L+ ++ A + 
Sbjct: 445  DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RW+DVER+R  M   G+     +S ++++  VHVF      HP   +IY  L  L  ++ 
Sbjct: 505  RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            + GYV +T  V  D+DEEEK   L  H+EKLAI +G+M T   + + V+KN RVCSDCH 
Sbjct: 565  EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              K +S +  RE  +RD  RFHHF++G CSC D W
Sbjct: 625  VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 220/467 (47%), Gaps = 58/467 (12%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S + D    G   + LL  +  +    +          +K C+ L   + G + H   
Sbjct: 44  WNSVIADLARSGDSAEALL-AFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
              G+  D+ +  AL+  Y  C  +E A K+F E+    D + W  +I     N    +A
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RDIVSWTSMIRGYDLNGNALDA 161

Query: 381 IKLFREM---QFSSAKAI---SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           + LF+++   +     A+   S  +V ++ AC++V A    + IH +V+K   +  +SV 
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221

Query: 435 NCLISMYSRNNK--LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           N L+  Y++  +  + +A ++FD + D +  S+NS++S Y   G  + A+ +F ++    
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL---- 277

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++  ++T+N +                              ++S VL AV+    L+ G+
Sbjct: 278 VKNKVVTFNAI------------------------------TLSTVLLAVSHSGALRIGK 307

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H  ++R GL+ D+ VGTS++DMY K   ++ A++ FD MKN+N+ +W ++I+GY   G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
               A ++   M +  ++P+ +++ S+++  S  G   E     + MK   G+ P +  +
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427

Query: 672 TSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++     +G LQ        K +  +Q+  +KP+S   SSLL  C
Sbjct: 428 GCMVDLLGRAGFLQ--------KAYDLIQRMKMKPDSIIWSSLLAAC 466



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 18/344 (5%)

Query: 175 ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-L 233
           AL    ++ K +     SS  C +   +    + S K  H Q    G  + SD  V S L
Sbjct: 60  ALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG--YQSDIFVSSAL 117

Query: 234 IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL------HG 287
           I  Y   G    A K F     R    W+S +  Y+   G   + + ++ +L        
Sbjct: 118 IVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYD-LNGNALDAVSLFKDLLVDENDDD 176

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD--V 345
             +   S  L  ++  C+++ A  L   +H+ +IKRGFD  V +   L++ Y K  +  V
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM---QFSSAKAISRTIVKM 402
             A K+F ++ D +D + +N I+ V  ++     A ++FR +   +  +  AI  T+  +
Sbjct: 237 AVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI--TLSTV 293

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L A +  GA   GK IH  V++  LE ++ V   +I MY +  ++E A + FD MK+ N+
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            SW +MI+ Y   G+   A  LF  M  S ++P+ IT+  +L+ 
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 114/526 (21%), Positives = 206/526 (39%), Gaps = 108/526 (20%)

Query: 331 LKCALMNFYGKCRDVESAN--KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           L C++       R  E  N   LF+   D  D   WN +I    R+     A+  F  M+
Sbjct: 9   LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR 68

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
             S      +    ++AC+ +     GKQ H        +S++ V + LI MYS   KLE
Sbjct: 69  KLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A +VFD +   ++ SW SMI  Y   G    A SLF  +       D   +        
Sbjct: 129 DARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF-------- 180

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                         + S+G       VSV+  A + +         H ++++ G D  + 
Sbjct: 181 --------------LDSMGL------VSVI-SACSRVPAKGLTESIHSFVIKRGFDRGVS 219

Query: 569 VGTSLMDMYVKN--DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           VG +L+D Y K     +  A+++FD + +++ V++NS++S Y   G+   A ++  ++ +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279

Query: 627 EEI------------------------------------KPDLVSWNSLVSGYSIWGQSK 650
            ++                                    + D++   S++  Y   G+ +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            A      MKN     NV +WT++I+G   + +  ++L+ F  M    ++PN  T  S+L
Sbjct: 340 TARKAFDRMKN----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 711 QTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
             C   GL   G +  + +  + G          ++D+  ++G L+ A ++ ++   K  
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK-- 453

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
                                           PD+I +++LLAAC+
Sbjct: 454 --------------------------------PDSIIWSSLLAACR 467



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 109/271 (40%), Gaps = 36/271 (13%)

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL-HGKGVIFRSRILTI 299
           G    A K F     +    ++S +  Y    G   E  EV+  L   K V F +  L+ 
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSNEAFEVFRRLVKNKVVTFNAITLST 292

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L   +   A  +G  +H  +I+ G + DV +  ++++ Y KC  VE+A K F  + + +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN-K 351

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +   W  +I     +     A++LF  M  S  +    T V +L AC+     H G  + 
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-----HAGLHVE 406

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G+   +A++    V                         +  L  +  M+      G++ 
Sbjct: 407 GWRWFNAMKGRFGV-------------------------EPGLEHYGCMVDLLGRAGFLQ 441

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            A+ L  +M   +++PD I W+ LL+    H
Sbjct: 442 KAYDLIQRM---KMKPDSIIWSSLLAACRIH 469


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/695 (32%), Positives = 361/695 (51%), Gaps = 84/695 (12%)

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
              L+S N +++ Y     +D A  LF+++     Q    TW  L+SG    GS + V  L
Sbjct: 322  QTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQ----TWTILISGFSRAGSSEVVFKL 377

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             R M++ G  PN  ++S + +  +    L+ G+  H ++LRNG+D D+ +G S++D+Y+K
Sbjct: 378  FREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLK 437

Query: 580  NDCLQNAQEVFDNMKN-------------------------------RNIVAWNSLISGY 608
                + A+ VF+ M                                 +++V+WN+++ G 
Sbjct: 438  CKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGL 497

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVSW-------------------------------- 636
               G    A + L  M E   +  +V++                                
Sbjct: 498  MQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDG 557

Query: 637  ---NSLVSGYSIWGQSKEALVIIHHMK-------NSGIY-----PNVVTWTSLISGSLQN 681
               +SLV  Y   G+   A +++  +        N+G+        +V+W  ++SG + N
Sbjct: 558  FIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWN 617

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
              Y + LK F  M +E +  +  T+++++  C   G+L+ G+ +H    K G   DAYV 
Sbjct: 618  GKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVG 677

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            + LIDMYSKSG+L  A  +FR++    +  W  MI G A++G GK+AI LF E+L  G  
Sbjct: 678  SSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGII 737

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            P+ +TF  +L AC ++GL+EEG +YF  M   Y I P +EH + MVDL G+AG+L E  +
Sbjct: 738  PNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKN 797

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
            FI         ++W + L SCR+H ++E  +  S  L ++ P +   Y L+ N+ A ++R
Sbjct: 798  FIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHR 857

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            W++  R+R  M + G+K     SWIQ+   +H F      HP   EIY  L  L+  +K+
Sbjct: 858  WDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKE 917

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSH-TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            +GY  D + V QD+ EEE+G+VL+SH +EKLA+V+G++ T +R PIR+IKN R+C+DCH 
Sbjct: 918  IGYSFDVKLVMQDV-EEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHN 976

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              KY S +  REI LRD  RFHHF+ G CSC D W
Sbjct: 977  FIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 231/528 (43%), Gaps = 74/528 (14%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +HA  +K G    ++    L+  Y K  +++ A KLF E+    +   W  +I    R  
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQ-RNTQTWTILISGFSRAG 369

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             E   KLFREM+   A     T+  + + C+       GK +H ++L++ +++++ + N
Sbjct: 370 SSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGN 429

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            ++ +Y +    E A RVF+ M + ++ SWN MIS+Y   G V+ +  +F ++       
Sbjct: 430 SILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLP----YK 485

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D+++WN ++ G    G  +  L  L  M   G   +  + S+ L   + L L++ GR+ H
Sbjct: 486 DVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLH 545

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV-----FDNMKNRN-----------IV 599
           G +L+ G   D ++ +SL++MY K   + NA  V      D +KN N           IV
Sbjct: 546 GMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIV 605

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG----------------- 642
           +W  ++SGY + G + +  K    M  E +  D+ +  +++S                  
Sbjct: 606 SWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYN 665

Query: 643 ------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                             YS  G   +A  I          PN+V WTS+ISG   +   
Sbjct: 666 HKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNE----PNIVFWTSMISGCALHGQG 721

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV---- 740
           ++++  F +M  + I PN  T   +L  C   GLL+ G      C     +KDAY     
Sbjct: 722 KQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEG------CRYFRMMKDAYCINPG 775

Query: 741 ---ATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGN 784
               T ++D+Y ++G+L   +  +F    +   + W   +    ++ N
Sbjct: 776 VEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKN 823



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/544 (22%), Positives = 228/544 (41%), Gaps = 93/544 (17%)

Query: 214 HAQMIKMGKI--WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
           HA  +K G +   NS + + +L   Y++  +   A K F     R+   W+  +  + S 
Sbjct: 312 HALSVKNGSLQTLNSANYLLTL---YVKSSNMDHARKLFDEIPQRNTQTWTILISGF-SR 367

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
            G  + + +++ E+  KG       L+ + K C+  +   LG  VHA +++ G D DV L
Sbjct: 368 AGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVL 427

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             ++++ Y KC+  E A ++F E+ +  D + WN +I   LR    E ++ +FR + +  
Sbjct: 428 GNSILDLYLKCKVFEYAERVF-ELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKD 486

Query: 392 AKAISRTIVKMLQACAKVGAFHE-------------------------------GKQIHG 420
             + +  +  ++Q   +  A  +                               G+Q+HG
Sbjct: 487 VVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHG 546

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
            VLK     +  + + L+ MY +  +++ A+ V   +    L + N+ ++          
Sbjct: 547 MVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVT---------- 596

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
                       ++  I++W  ++SG+  +G Y++ L   R M       +  +V+ ++ 
Sbjct: 597 ---------CKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIIS 647

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
           A     +L++GR  H Y  + G   D YVG+SL+DMY K+  L +A  +F      NIV 
Sbjct: 648 ACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVF 707

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           W S+ISG C                                  ++ GQ K+A+ +   M 
Sbjct: 708 WTSMISG-C----------------------------------ALHGQGKQAICLFEEML 732

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLL 719
           N GI PN VT+  +++         E  ++F  M+    I P     +S++   G  G L
Sbjct: 733 NQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHL 792

Query: 720 QNGK 723
              K
Sbjct: 793 TETK 796



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 30/366 (8%)

Query: 222 KIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELL 279
           ++ N  D+V    +I  YL  GD   +   F     +    W++ ++    FG E Q L 
Sbjct: 449 ELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALE 508

Query: 280 EVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY 339
           +++  +   G  F     +I L L + L    LG ++H  ++K GF  D  ++ +L+  Y
Sbjct: 509 QLYCMVEC-GTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMY 567

Query: 340 GKCRDVESANKLFSEV--------------SDLEDDLL-WNEIIMVKLRNEKWENAIKLF 384
            KC  +++A+ +  +V               +L+  ++ W  ++   + N K+E+ +K F
Sbjct: 568 CKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTF 627

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           R M         RT+  ++ ACA  G    G+ +H Y  K     +  V + LI MYS++
Sbjct: 628 RLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKS 687

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             L+ A  +F    + N+  W SMIS     G    A  LF +M +  I P+ +T+  +L
Sbjct: 688 GSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVL 747

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH-----GYIL 559
           +     G  +      R M+      +   ++  ++  T +  L YGR  H      +I 
Sbjct: 748 NACCHAGLLEEGCRYFRMMK------DAYCINPGVEHCTSMVDL-YGRAGHLTETKNFIF 800

Query: 560 RNGLDY 565
            NG+ +
Sbjct: 801 ENGISH 806


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/651 (34%), Positives = 345/651 (52%), Gaps = 48/651 (7%)

Query: 465  WNSMISSYTGL---GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            ++S + S+  L   G ++ A  LF +M +    PD    N ++ G+    +    ++L  
Sbjct: 45   FSSKLISFLALSHSGDLNYARKLFTQMQN----PDPFICNTMIRGYARSQNPYEAVSLYY 100

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M   G   +  +   VL A   L  +K GR  H  +L+NG   DL+V  +L+  Y    
Sbjct: 101  FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCG 160

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE-EEIKPDLVSWNSLV 640
                A +VFD    R++V WN +I+ +  KGL   A  +L++M + + ++PD V+  SLV
Sbjct: 161  SFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLV 220

Query: 641  SGYSIWGQSKEALVIIHHMKNSGIYPN-------------------------------VV 669
               +  G  +    +  + K  G+  N                               V+
Sbjct: 221  PACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVL 280

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +WTS++SG  ++  ++E+L  F +MQ   I+ +  T+  +L  C   G L  GK IH L 
Sbjct: 281  SWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLI 340

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
             K     D  + T L+DMY+K G++  A +VFR+   + + +WN +I G A++G+G++AI
Sbjct: 341  DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAI 400

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             LF ++      PD +TF ALL AC ++GLV+EG   F +M   + I P +EHY C+VDL
Sbjct: 401  SLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDL 460

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            L +A  +D+A  FI  MP K ++ +W  LLG+CR  GH + AE   RR+ +LEP +   Y
Sbjct: 461  LCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRY 520

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             ++ NL A  ++W+   +LR  M   G++     SWI+++ ++H F A    H  T +I 
Sbjct: 521  VMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQI- 579

Query: 970  FELYHLVSEMKKL-----GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
               Y ++ EM +      G+VP T  V  DI+EEEK   L  H+EKLAI  GL+ T S +
Sbjct: 580  ---YAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGS 636

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            PIR++KN RVC+DCH+  K  S V  REI  RD +RFHHF+EG CSC D W
Sbjct: 637  PIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 199/432 (46%), Gaps = 41/432 (9%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           +GV   +     +L  C +L A  LG   H  ++K GF  D+ +  AL+ FY  C     
Sbjct: 105 RGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGC 164

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQAC 406
           A  +F E S + D + WN +I   L     E A  L  EM +  + +    T+V ++ AC
Sbjct: 165 ACDVFDE-STVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPAC 223

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           A++G    GK +H Y  +  L+ NL V N ++ MY + + +E A  VF+ +++ ++ SW 
Sbjct: 224 AQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWT 283

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           SM+S     GY   A +LF KM  ++I+ D IT    L G                    
Sbjct: 284 SMLSGLAKSGYFQEALALFQKMQLNKIELDEIT----LVG-------------------- 319

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
                      VL A  +   L  G+  H  I +  ++ DL + T+L+DMY K   +  A
Sbjct: 320 -----------VLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLA 368

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
            +VF  M+ RN+  WN+LI G    G   +A  + +QME +++ PD V++ +L+   S  
Sbjct: 369 LQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHA 428

Query: 647 GQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
           G   E L +   MKN   I P +  +  ++    +     ++L F   M    IK NS  
Sbjct: 429 GLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP---IKANSVL 485

Query: 706 MSSLLQTCGGLG 717
            ++LL  C   G
Sbjct: 486 WATLLGACRSGG 497



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 183/415 (44%), Gaps = 76/415 (18%)

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
           D+  A KLF+++ +  D  + N +I    R++    A+ L+  M        + T   +L
Sbjct: 60  DLNYARKLFTQMQN-PDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVL 118

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            ACA++GA   G++ H  VLK+   S+L V N LI  Y        A  VFD     ++ 
Sbjct: 119 AACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVV 178

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNS-SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
           +WN MI+++   G  + A+ L ++M     ++PD +T                       
Sbjct: 179 TWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTM---------------------- 216

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                       VS+V  A  +L  L+ G+  H Y    GLD +L V  +++DMY K D 
Sbjct: 217 ------------VSLV-PACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDD 263

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA-----KKMLNQMEEE---------- 627
           +++AQEVF+ ++ +++++W S++SG    G F  A     K  LN++E +          
Sbjct: 264 IESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSA 323

Query: 628 --------------------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                               EI  DLV   +LV  Y+  G    AL +   M+      N
Sbjct: 324 CAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR----VRN 379

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           V TW +LI G   + +  +++  F QM+ + + P+  T  +LL  C   GL+  G
Sbjct: 380 VFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 434



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 212/461 (45%), Gaps = 56/461 (12%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY--ES 270
           H +++K G  + SD  V  +LI  Y   G F  A   F     R    W+  +  +  + 
Sbjct: 134 HCEVLKNG--FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKG 191

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKRGFDFD 328
              +  +LL+   +L       R   +T++  +  C +L     G  +H+   + G D +
Sbjct: 192 LSEKAFDLLDEMTKLDN----LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDEN 247

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           + +  A+++ Y KC D+ESA ++F+ + + +D L W  ++    ++  ++ A+ LF++MQ
Sbjct: 248 LRVNNAILDMYCKCDDIESAQEVFNRIRE-KDVLSWTSMLSGLAKSGYFQEALALFQKMQ 306

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
            +  +    T+V +L ACA+ GA  +GK IH  + K  +  +L +   L+ MY++   ++
Sbjct: 307 LNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSID 366

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
           LA +VF  M+  N+ +WN++I      G+ + A SLF++M   ++ PD +T+  LL    
Sbjct: 367 LALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS 426

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             G     L + + M++              +   E R+  YG                 
Sbjct: 427 HAGLVDEGLAMFQAMKN--------------KFQIEPRMEHYG----------------- 455

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
               ++D+  +   + +A    +NM  + N V W +L+      G F  A+K+  ++   
Sbjct: 456 ---CVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRV--I 510

Query: 628 EIKPD----LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           E++PD     V  ++L +G S W     AL +   MKN GI
Sbjct: 511 ELEPDSCGRYVMLSNLYAGVSQWDH---ALKLRKQMKNKGI 548



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 42/260 (16%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMY--SKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
           K+ H L L+   + +   ++ LI     S SG+L  AR++F +  N      N MI G+A
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF-----DSMSTDYN 835
              N  EA+ L++ ++E G   D  T+  +LAAC   G V+ G ++      +   +D  
Sbjct: 88  RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147

Query: 836 IIPTIEH-------YSCMVDLLGKA------------------GYLDEAWDFIRTMP--- 867
           +I  +         + C  D+  ++                  G  ++A+D +  M    
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207

Query: 868 -FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN--LLAMSNRWED 924
             +PD     +L+ +C   G+LE  +       +L      + NL +N  +L M  + +D
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL----GLDENLRVNNAILDMYCKCDD 263

Query: 925 VERLRHSMDEVGVKSVLVWS 944
           +E  +   + +  K VL W+
Sbjct: 264 IESAQEVFNRIREKDVLSWT 283


>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
          Length = 616

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/583 (36%), Positives = 314/583 (53%), Gaps = 39/583 (6%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            +PD   WN ++ G          L L   M       N  +   +L+A + L   +   +
Sbjct: 72   RPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQ 131

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             H +I + G  +D+Y                               A NSLI+ Y   G 
Sbjct: 132  IHAHITKFGYGHDIY-------------------------------AVNSLINSYAVTGN 160

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
            F +A  + ++++E    PD VSWNS++ GY   G+   AL +   M       N ++WT+
Sbjct: 161  FKHAHLLFDRIQE----PDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKN---NAISWTT 213

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +ISG +Q    +E+L+ F +MQ  ++ P++ +++S L  C  LG L+ GK IH    K  
Sbjct: 214  MISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTR 273

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
               D+ +   LIDMY+K G ++ A  VF+    K++  W  +I G+A +G G+EAI  F 
Sbjct: 274  TRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFL 333

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            E+   G +P+AITFTA+L AC  +GLVEEG   F+++  DYN+ PTIEHY CMVDLLG+A
Sbjct: 334  EMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRA 393

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L+EA  FI+ MP KP+A IWG+LL +C+IH ++E  E     L +++  +   Y  M 
Sbjct: 394  GLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMA 453

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ AM  +W+     R  M E GV  V   S I ++   H F A    H    EI  +  
Sbjct: 454  NIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEIRTKWR 513

Query: 974  HLVSEMKKLGYVPDTRCVYQD-IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
             +  ++++ GYVP+   +  D +D+EEK  ++  H+EKLAI YGLMKTK    IR++KN 
Sbjct: 514  FVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAITYGLMKTKPGTTIRIMKNL 573

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCH     +S +  R+I +RD  RFHHF++G+CSC D W
Sbjct: 574  RVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCGDYW 616



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 198/404 (49%), Gaps = 15/404 (3%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA ++K G   D +     ++F         A+ +F    D  D  LWN +I     +
Sbjct: 29  QIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGLSCS 88

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
           ++ + ++ L+  M   SA   + T   +L+AC+ + AF E  QIH ++ K     ++   
Sbjct: 89  DQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAV 148

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N LI+ Y+     + A  +FD +++ +  SWNS+I  Y   G +D+A +LF KM     +
Sbjct: 149 NSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPE---K 205

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            + I+W  ++SG+   G  +  L L   MQ+    P+  S++  L A ++L  L+ G+  
Sbjct: 206 NNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWI 265

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H Y  +     D  +   L+DMY K   ++ A  VF NMK +++  W +LISGY + GL 
Sbjct: 266 HSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLG 325

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTS 673
             A     +M+   +KP+ +++ ++++  S  G  +E   + + + ++  + P +  +  
Sbjct: 326 REAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGC 385

Query: 674 LIS----GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           ++       L NE  R     FI  Q+  +KPN+    SLL+ C
Sbjct: 386 MVDLLGRAGLLNEANR-----FI--QKMPLKPNAVIWGSLLKAC 422



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 31/188 (16%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA-SWNCMIMGFAI 781
           K+IH   LK+G ++D Y  T  +     S     A +VF    ++     WN MI G + 
Sbjct: 28  KQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGLSC 87

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE-----------GWKY---- 826
                 ++LL+H +L      +A TF  LL AC N    +E           G+ +    
Sbjct: 88  SDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYA 147

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLG---------------KAGYLDEAWDFIRTMPFKPD 871
            +S+   Y +    +H   + D +                KAG +D A    R MP K +
Sbjct: 148 VNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNN 207

Query: 872 ATIWGALL 879
           A  W  ++
Sbjct: 208 AISWTTMI 215


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/708 (30%), Positives = 372/708 (52%), Gaps = 73/708 (10%)

Query: 406  CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            C++      GK +H   +   L + + + N L SMY+   ++  A RVFD+ ++H+  SW
Sbjct: 113  CSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSW 172

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            NS++S Y   G  +    +F+ M         + WN      F  GS             
Sbjct: 173  NSLLSGYVRAGAREETLKVFSLMCHHG-----LGWN-----SFALGSIIKCCA------- 215

Query: 526  LGFRPNGSSVSV-VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
                 +GS V   + +AV            HG +++ GLD DL++ ++++DMY K   L 
Sbjct: 216  -----SGSDVGRHIAEAV------------HGCVVKAGLDADLFLASAMIDMYAKRGALT 258

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCF------KGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
            NA  +F ++ + N++ +N++I+G+C       K +   A  + ++M+   ++P   +++S
Sbjct: 259  NAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSS 318

Query: 639  LVSGYSI-----WGQSKEALVIIHHM--------------KNSGIYP------------N 667
            ++   ++     +G+     V+ H                 +SG               +
Sbjct: 319  ILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQD 378

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +VTWTS+ISG +QNE + ++L+ F +     +KP+  TMSS++  C  L + + G++I C
Sbjct: 379  IVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQC 438

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
            L +K GF +   +    I M ++SG++ +    F++  ++ + SW+ +I   A +G  ++
Sbjct: 439  LAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARD 498

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ +F+E++     P+ +TF  +L AC + GLV++G +Y++ M  +Y + PTI+H +C+V
Sbjct: 499  ALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVV 558

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG L +A  FIR   F  DA +W +LL SCRIHG +E  ++ + ++  LEP +SA
Sbjct: 559  DLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSA 618

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
            +Y ++ N+   +       + R  M E GVK     SWI++   VH F A    HP +  
Sbjct: 619  SYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNA 678

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY +L  ++S+++KL    +       I   E+  ++  H+EK+A+ +G++     APIR
Sbjct: 679  IYKKLAEMLSKIEKLANTDNASTGSDGISSSEQ-NLVGCHSEKIAVAFGMIHLPQSAPIR 737

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            V+KN RVC DCH+  K +S    REI LRDG RFHHFR G CSC D W
Sbjct: 738  VMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785



 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 240/537 (44%), Gaps = 81/537 (15%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C++ +    G  VHA  +  G    V L  +L + Y  C ++  A ++F + ++  DD+ 
Sbjct: 113 CSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVF-DAAEEHDDVS 171

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK---VGAFHEGKQIHG 420
           WN ++   +R    E  +K+F  M        S  +  +++ CA    VG  H  + +HG
Sbjct: 172 WNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGR-HIAEAVHG 230

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY------TG 474
            V+K+ L+++L + + +I MY++   L  A  +F S+ D N+  +N+MI+ +       G
Sbjct: 231 CVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVG 290

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                 A SL+++M S  +QP   T+                                  
Sbjct: 291 KEVSREALSLYSEMQSRGMQPSEFTF---------------------------------- 316

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            S +L+A        +G++ HG +L++    D Y+G++L+D+Y  + C+++    F ++ 
Sbjct: 317 -SSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLP 375

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQS 649
            ++IV W S+ISG     LF  A ++  +     +KPDL + +S+++       +  G+ 
Sbjct: 376 KQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQ 435

Query: 650 KEALVI--------------IHHMKNSGIYP------------NVVTWTSLISGSLQNEN 683
            + L I              IH    SG               +VV+W+++IS   Q+  
Sbjct: 436 IQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGC 495

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN--GFIKDAYVA 741
            R++L+ F +M    + PN  T  ++L  C   GL+ +G   + + +KN  G        
Sbjct: 496 ARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEI-MKNEYGLSPTIKHV 554

Query: 742 TGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           T ++D+  ++G L  A    R SA +     W  ++    I+G+ +   L+  ++++
Sbjct: 555 TCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMD 611



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/533 (22%), Positives = 220/533 (41%), Gaps = 90/533 (16%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR---NNKLELATRVFDS 456
           + +L++C    A      +H ++ ++   ++L + N L++ Y R      L  A R+ D 
Sbjct: 6   LDLLRSCT---ALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLH-AARLIDE 61

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
           M   N  S+N +ISSY+  G    A   F +                             
Sbjct: 62  MPRRNAVSYNLLISSYSRAGLPGRALETFARA---------------------------- 93

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
                   + G R +  + +  L A +    L+ G+  H   + +GL   +++  SL  M
Sbjct: 94  ------RAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASM 147

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY----------------CFKGLFVN---- 616
           Y     +  A+ VFD  +  + V+WNSL+SGY                C  GL  N    
Sbjct: 148 YASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFAL 207

Query: 617 -----------------AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
                            A+ +   + +  +  DL   ++++  Y+  G    A+ +   +
Sbjct: 208 GSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSV 267

Query: 660 KNSGIYPNVVTWTSLISGSLQNENY------RESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +    PNV+ + ++I+G  ++E        RE+L  + +MQ   ++P+  T SS+L+ C
Sbjct: 268 PD----PNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRAC 323

Query: 714 GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              G    GK+IH   LK+ F  D Y+ + LID+YS SG ++     FR    + + +W 
Sbjct: 324 NLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWT 383

Query: 774 CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
            MI G       ++A+ LF E +  G +PD  T ++++ AC +  +   G +    ++  
Sbjct: 384 SMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTG-EQIQCLAIK 442

Query: 834 YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           Y         +  + +  ++G +D      + M  + D   W A++ S   HG
Sbjct: 443 YGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESR-DVVSWSAVISSHAQHG 494



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 198/442 (44%), Gaps = 31/442 (7%)

Query: 262 SSFLEDYESFGGEV-QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           + F  D  + G EV +E L ++ E+  +G+       + IL+ C     F  G ++H  +
Sbjct: 280 AGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQV 339

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           +K  F  D ++  AL++ Y     +E   + F  +   +D + W  +I   ++NE +E A
Sbjct: 340 LKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPK-QDIVTWTSMISGCVQNELFEKA 398

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           ++LF+E      K    T+  ++ ACA +     G+QI    +K       ++ N  I M
Sbjct: 399 LRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHM 458

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
            +R+  ++  TR F  M+  ++ SW+++ISS+   G    A  +FN+M ++++ P+ +T+
Sbjct: 459 CARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTF 518

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAVTELRLLKYGR--ESHGY 557
             +L+     G   + L     M++  G  P    V+ V+       L + GR  ++  +
Sbjct: 519 LNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDL-----LGRAGRLADAEAF 573

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD---NMKNRNIVAWNSLISGYCFKGLF 614
           I  +    D  V  SL+     +  ++  Q V D   +++  +  ++  L + Y   G  
Sbjct: 574 IRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGEL 633

Query: 615 VNAKKMLNQMEEEEIKPDL-VSWNSLVSGY--------------SIWGQSKEALVIIHHM 659
             A K  + M+E  +K +  +SW  L SG               +I+ +  E L  I  +
Sbjct: 634 SLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKL 693

Query: 660 KNSGIYPNVVTWTSLISGSLQN 681
            N+    N  T +  IS S QN
Sbjct: 694 ANT---DNASTGSDGISSSEQN 712


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/560 (34%), Positives = 323/560 (57%), Gaps = 39/560 (6%)

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
             +  HG  +R  L  D+ +   L++ Y K   ++ A++VFD M  R++V+WN++I  Y  
Sbjct: 82   AKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG---------------------------- 642
              +   A  +  +M  E  K    + +S++S                             
Sbjct: 142  NRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYV 201

Query: 643  -------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
                   Y+  G   +A+ +   M++     + VTW+S+++G +Q++NY E+L  + + Q
Sbjct: 202  GTALLDLYAKCGMINDAVQVFESMQD----KSSVTWSSMVAGYVQSKNYEEALLLYRRAQ 257

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
            +  ++ N  T+SS++  C  L  L  GK++H +  K+GF  + +VA+  +DMY+K G+L+
Sbjct: 258  RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLR 317

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             +  +F +   K +  WN +I GFA +   KE ++LF ++ + G  P+ +TF++LL+ C 
Sbjct: 318  ESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCG 377

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            ++GLVEEG ++F  M T Y + P + HYSCMVD+LG+AG L EA++ I+++PF+P A+IW
Sbjct: 378  HTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIW 437

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
            G+LL SCR+  +LE AE+A+++LF+LEP N+ N+ L+ N+ A + +WE++ + R  + + 
Sbjct: 438  GSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDC 497

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
             VK V   SWI I   VH+F    + HP   EI   L +LV E++K GY P       D+
Sbjct: 498  DVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDV 557

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            +  +K ++L+ H+EKLA+V+GLM     + +R++KN R+C DCH   K  S+   R I +
Sbjct: 558  EIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIV 617

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHF +G CSC + W
Sbjct: 618  RDANRFHHFSDGHCSCGEFW 637



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 200/441 (45%), Gaps = 78/441 (17%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           +++LQ CA+ GA  E K  HG  ++  L+ ++++ N LI+ YS+   +ELA +VFD M +
Sbjct: 67  IEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLE 126

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            +L SWN+MI  YT            N+M S  +    I W                   
Sbjct: 127 RSLVSWNTMIGLYTR-----------NRMESEALD---IFWE------------------ 154

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M++ GF+ +  ++S VL A          ++ H   ++  LD +LYVGT+L+D+Y K
Sbjct: 155 ---MRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAK 211

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK---------------------------- 611
              + +A +VF++M++++ V W+S+++GY                               
Sbjct: 212 CGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSV 271

Query: 612 -------GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
                     +  K+M   + +     ++   +S V  Y+  G  +E+ +I   ++    
Sbjct: 272 ICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE--- 328

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
             N+  W ++ISG  ++   +E +  F +MQQ+ + PN  T SSLL  CG  GL++ G+ 
Sbjct: 329 -KNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 387

Query: 725 IHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIY 782
              L     G   +    + ++D+  ++G L  A E+ +    +  AS W  ++    + 
Sbjct: 388 FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVC 447

Query: 783 GNGKEAILLFHELLETGFQPD 803
            N + A +   +L E   +P+
Sbjct: 448 KNLELAEVAAKKLFE--LEPE 466



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 196/422 (46%), Gaps = 54/422 (12%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL+LC +  A       H   ++     DV L   L+N Y KC  VE A ++F  +  LE
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGM--LE 126

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
             L+ WN +I +  RN     A+ +F EM+    K    TI  +L AC       E K++
Sbjct: 127 RSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKL 186

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H   +K++L+ NL V   L+ +Y++   +  A +VF+SM+D +                 
Sbjct: 187 HCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKS----------------- 229

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                              +TW+ +++G+    +Y+  L L R  Q +    N  ++S V
Sbjct: 230 ------------------SVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSV 271

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           + A + L  L  G++ H  I ++G   +++V +S +DMY K   L+ +  +F  ++ +NI
Sbjct: 272 ICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNI 331

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
             WN++ISG+           +  +M+++ + P+ V+++SL+S     G  +E       
Sbjct: 332 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 391

Query: 659 MKNS-GIYPNVVTWTSLIS----GSLQNENYR--ESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           M+ + G+ PNVV ++ ++       L +E Y   +S+ F         +P ++   SLL 
Sbjct: 392 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF---------EPTASIWGSLLA 442

Query: 712 TC 713
           +C
Sbjct: 443 SC 444



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 145/299 (48%), Gaps = 5/299 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K+ H + ++M ++     +   LI  Y + G    A + F     RS   W++ +  Y  
Sbjct: 83  KACHGKTMRM-ELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
              E  E L+++ E+  +G  F    ++ +L  C          ++H   +K   D +++
Sbjct: 142 NRME-SEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLY 200

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  AL++ Y KC  +  A ++F  + D +  + W+ ++   ++++ +E A+ L+R  Q  
Sbjct: 201 VGTALLDLYAKCGMINDAVQVFESMQD-KSSVTWSSMVAGYVQSKNYEEALLLYRRAQRM 259

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
           S +    T+  ++ AC+ + A  EGKQ+H  + KS   SN+ V +  + MY++   L  +
Sbjct: 260 SLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRES 319

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS--GH 507
             +F  +++ N+  WN++IS +           LF KM    + P+ +T++ LLS  GH
Sbjct: 320 YIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 378



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 14/246 (5%)

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP----------NSTTMSSLLQT 712
           G   N +    ++       +   ++  F   +QE++ P           ++    +LQ 
Sbjct: 13  GFTANFLIRCKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASDFIEILQL 72

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
           C   G +   K  H   ++     D  ++  LI+ YSK G ++ AR+VF     ++L SW
Sbjct: 73  CARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSW 132

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC-KNSGLVEEGWKYFDSMS 831
           N MI  +       EA+ +F E+   GF+    T +++L+AC  N   +E    +  SM 
Sbjct: 133 NTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMK 192

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           T  ++   +   + ++DL  K G +++A     +M  K   T W +++       + E A
Sbjct: 193 TSLDL--NLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVT-WSSMVAGYVQSKNYEEA 249

Query: 892 EIASRR 897
            +  RR
Sbjct: 250 LLLYRR 255


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Glycine max]
          Length = 573

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/555 (35%), Positives = 311/555 (56%), Gaps = 32/555 (5%)

Query: 552  RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            R+ H +++ NG   DL +   L+  Y ++  + +A  +FD +  R+   W+ ++ G+   
Sbjct: 20   RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 612  GLFVNAKKMLNQMEEEEIKPD-------------------------LVSWNSLVSGY--- 643
            G          ++    + PD                         +V  + L+S +   
Sbjct: 80   GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 644  -SIWGQSKEALVI--IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             S+     + +V+     +    +  ++VTWT +I G+  + N  ESL  F +M++E + 
Sbjct: 140  ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMI-GAYADCNAYESLVLFDRMREEGVV 198

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
            P+   M +++  C  LG +   +  +   ++NGF  D  + T +IDMY+K G+++SAREV
Sbjct: 199  PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 761  FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
            F +   K + SW+ MI  +  +G GK+AI LFH +L     P+ +TF +LL AC ++GL+
Sbjct: 259  FDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLI 318

Query: 821  EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            EEG ++F+SM  ++ + P ++HY+CMVDLLG+AG LDEA   I  M  + D  +W ALLG
Sbjct: 319  EEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
            +CRIH  +E AE A+  L +L+P N  +Y L+ N+ A + +WE V + R  M +  +K +
Sbjct: 379  ACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKI 438

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
              W+WI++D   + FS     HP + EIY  L  L+ +++  GYVPDT  V QD++EE K
Sbjct: 439  PGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVK 498

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
             ++L +H+EKLAI +GL+      PIR+ KN RVC DCHT +K +S +  R I +RD  R
Sbjct: 499  QEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANR 558

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF +G CSC D W
Sbjct: 559  FHHFNDGTCSCGDYW 573



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 184/400 (46%), Gaps = 41/400 (10%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           +VHA ++  G   D+ +   L+  Y + + ++ A  LF  ++ + D   W+ ++    + 
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT-MRDSKTWSVMVGGFAKA 79

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
                    FRE+        + T+  +++ C        G+ IH  VLK  L S+  VC
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+ MY++   +E A R+F+ M                                   + 
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERM-----------------------------------LS 164

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            D++TW  ++  +    +Y++ L L   M+  G  P+  ++  V+ A  +L  +   R +
Sbjct: 165 KDLVTWTVMIGAYADCNAYES-LVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFA 223

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           + YI+RNG   D+ +GT+++DMY K   +++A+EVFD MK +N+++W+++I+ Y + G  
Sbjct: 224 NDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRG 283

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTS 673
            +A  + + M    I P+ V++ SL+   S  G  +E L   + M +   + P+V  +T 
Sbjct: 284 KDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTC 343

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           ++    +     E+L+    M    ++ +    S+LL  C
Sbjct: 344 MVDLLGRAGRLDEALRLIEAMT---VEKDERLWSALLGAC 380



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 13/334 (3%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYAD 260
           + R +  ++  HA ++  G +    D+V    L++ Y +      A   F     R    
Sbjct: 12  RCRNVFHIRQVHAHVVANGTL---QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKT 68

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           WS  +  +    G+       + EL   GV   +  L  +++ C       +G  +H  +
Sbjct: 69  WSVMVGGFAK-AGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVV 127

Query: 321 IKRGFDFDVHLKCA-LMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWE 378
           +K G   D H  CA L++ Y KC  VE A +LF  +  L  DL+ W  +I        +E
Sbjct: 128 LKHGLLSD-HFVCASLVDMYAKCIVVEDAQRLFERM--LSKDLVTWTVMIGAYADCNAYE 184

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
           + + LF  M+          +V ++ ACAK+GA H  +  + Y++++    ++ +   +I
Sbjct: 185 SLV-LFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMI 243

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY++   +E A  VFD MK+ N+ SW++MI++Y   G    A  LF+ M S  I P+ +
Sbjct: 244 DMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRV 303

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPN 531
           T+  LL      G  +  L     M +    RP+
Sbjct: 304 TFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPD 337



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 14/264 (5%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  ++K G +  SD  V  SL+  Y +      A + F    S+    W+  +  Y    
Sbjct: 124 HDVVLKHGLL--SDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN 181

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
               E L ++  +  +GV+     +  ++  C KL A       +  +++ GF  DV L 
Sbjct: 182 A--YESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG 239

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            A+++ Y KC  VESA ++F  + + ++ + W+ +I     + + ++AI LF  M  S A
Sbjct: 240 TAMIDMYAKCGSVESAREVFDRMKE-KNVISWSAMIAAYGYHGRGKDAIDLF-HMMLSCA 297

Query: 393 KAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELA 450
              +R T V +L AC+  G   EG +    + +  A+  ++    C++ +  R  +L+ A
Sbjct: 298 ILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEA 357

Query: 451 TRVFDSM---KDHNLSSWNSMISS 471
            R+ ++M   KD  L  W++++ +
Sbjct: 358 LRLIEAMTVEKDERL--WSALLGA 379


>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
 gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
          Length = 605

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/633 (33%), Positives = 338/633 (53%), Gaps = 54/633 (8%)

Query: 447  LELATRVFDSMKDHNLSSWNSMISSY---TGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
            L  A   F S +    +++N +++ Y   +G G +  A  LF+ +      PD +++N L
Sbjct: 23   LAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIP----HPDAVSYNTL 78

Query: 504  LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
            LS HF  G       +   M               ++ VT    +  G            
Sbjct: 79   LSCHFACGDIDGAWRVFSTMP--------------VRDVTSWNTMVSG------------ 112

Query: 564  DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
                           KN  ++ A+ +F  M  RN V+WN++++     G    A+ +   
Sbjct: 113  -------------LSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRN 159

Query: 624  MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
              E   K D + W ++VSGY   G  ++A+     M       N+V+W ++++G ++N  
Sbjct: 160  APE---KTDAILWTAMVSGYMDTGNVQKAMEYFRAMP----VRNLVSWNAVVAGYVKNSR 212

Query: 684  YRESLKFFIQMQQEDI-KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              ++L+ F  M ++ I +PN +T+SS+L  C  L  L  G+++H  C+K    +   V T
Sbjct: 213  AGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGT 272

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             L+ MY K G+L  A ++F +   K + +WN MI G+A +G G++AI LF ++ + G  P
Sbjct: 273  SLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVP 332

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            D IT  A+L AC ++GL + G + F++M   YNI P ++HYSCMVDLL +AG L+ A + 
Sbjct: 333  DWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNM 392

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I +MPF+P  + +G LL +CR++ +LE+AE A+R+L + +P N+  Y  + N+ A++NRW
Sbjct: 393  IHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRW 452

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            +DV R+R  M +  V     +SW++I  + H F +    HP    I+ +L  L   MK +
Sbjct: 453  DDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAM 512

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GY PD      D++E  K ++L+ H+EKLAI +GL+ T     +R+ KN R+C DCH AA
Sbjct: 513  GYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAA 572

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K +S +  REI LRD  RFHHFR G CSC D W
Sbjct: 573  KLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 35/233 (15%)

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N ++S  S+N  +E A  +F +M   N  SWN+M+++    G +  A +LF        +
Sbjct: 107 NTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPE---K 163

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGM------------------------------- 523
            D I W  ++SG+   G+ Q  +   R M                               
Sbjct: 164 TDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTM 223

Query: 524 -QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            +    +PN S++S VL   + L  L +GR+ H + ++  L   + VGTSL+ MY K   
Sbjct: 224 VEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGD 283

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           L +A ++FD M  ++IVAWN++ISGY   G    A K+  +M++E + PD ++
Sbjct: 284 LDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWIT 336



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 177/421 (42%), Gaps = 89/421 (21%)

Query: 435 NCLISMYSRNN---KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           NCL++ Y++ +   +L  A R+FDS+   +  S+N+++S +   G +D AW +F+ M   
Sbjct: 42  NCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVR 101

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               D+ +WN ++SG   +G+ +    + R M      P  ++VS    A+   R     
Sbjct: 102 ----DVTSWNTMVSGLSKNGAIEEAEAMFRAM------PARNAVS--WNAMVAARASSGD 149

Query: 552 RESHGYILRNGLD-YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
             +   + RN  +  D  + T+++  Y+    +Q A E F  M  RN+V+WN++++GY  
Sbjct: 150 MGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVK 209

Query: 611 KGLFVNAKKMLNQMEEEEI---KPDLVS--------------------W----------- 636
                +A ++   M E+ I    P  +S                    W           
Sbjct: 210 NSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSIT 269

Query: 637 --NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
              SL+S Y   G   +A  +   M       ++V W ++ISG  Q+   R+++K F +M
Sbjct: 270 VGTSLLSMYCKCGDLDDACKLFDEMHTK----DIVAWNAMISGYAQHGGGRKAIKLFEKM 325

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
           + E + P+  T+ ++L  C   GL   G  I C       +++AY     +D YS     
Sbjct: 326 KDEGVVPDWITLLAVLTACIHTGLCDFG--IQCF----ETMQEAYNIEPQVDHYS----- 374

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
                              CM+      G  + A+ + H +    F+P    +  LL AC
Sbjct: 375 -------------------CMVDLLCRAGLLERAVNMIHSM---PFEPHPSAYGTLLTAC 412

Query: 815 K 815
           +
Sbjct: 413 R 413



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 95/180 (52%), Gaps = 2/180 (1%)

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           D  L  A+++ Y    +V+ A + F  +  + + + WN ++   ++N +  +A+++F+ M
Sbjct: 165 DAILWTAMVSGYMDTGNVQKAMEYFRAMP-VRNLVSWNAVVAGYVKNSRAGDALRVFKTM 223

Query: 388 -QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
            + +  +    T+  +L  C+ + A   G+Q+H + +K  L  +++V   L+SMY +   
Sbjct: 224 VEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGD 283

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           L+ A ++FD M   ++ +WN+MIS Y   G    A  LF KM    + PD IT   +L+ 
Sbjct: 284 LDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTA 343



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 117/256 (45%), Gaps = 8/256 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y++ G+   A + F     R+   W++ +  Y        + L V+  +    ++
Sbjct: 171 AMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVK-NSRAGDALRVFKTMVEDAIV 229

Query: 292 -FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
                 L+ +L  C+ L A   G +VH   +K      + +  +L++ Y KC D++ A K
Sbjct: 230 QPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACK 289

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LF E+   +D + WN +I    ++     AIKLF +M+         T++ +L AC   G
Sbjct: 290 LFDEMH-TKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTG 348

Query: 411 AFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
               G Q    + ++  +E  +   +C++ +  R   LE A  +  SM  + + S++ ++
Sbjct: 349 LCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTL 408

Query: 469 ISS---YTGLGYVDVA 481
           +++   Y  L + + A
Sbjct: 409 LTACRVYKNLEFAEFA 424



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 11/151 (7%)

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           +L  A E F  +  KT  ++NC++ G+A   +G   +     L ++   PDA+++  LL+
Sbjct: 22  DLAGAEEAFASTQLKTTTTYNCLLAGYA-KASGPGRLADARRLFDSIPHPDAVSYNTLLS 80

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
                G ++  W+ F +M      +  +  ++ MV  L K G ++EA    R MP + +A
Sbjct: 81  CHFACGDIDGAWRVFSTMP-----VRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPAR-NA 134

Query: 873 TIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
             W A++ +    G +  AE     LF+  P
Sbjct: 135 VSWNAMVAARASSGDMGAAE----NLFRNAP 161


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 257/871 (29%), Positives = 434/871 (49%), Gaps = 94/871 (10%)

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSR-----ILTIILKLCTKLMAF 310
            R+   W+S +  Y   G  V    +++  +  +G+ F  +       ++I   C+ +  F
Sbjct: 712  RNSISWNSIISVYSRRGDXVSAY-DLFSSMQKEGLGFSFKPNEYTFGSLITAACSSV-DF 769

Query: 311  WLGV--EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII 368
             L V  ++ A + K GF  D+++  AL++ + +    + A  +F ++  + + +  N ++
Sbjct: 770  GLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMG-VRNVVSMNGLM 828

Query: 369  MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK----QIHGYVLK 424
            +  ++ ++ E A K+F EM+       S + V +L A ++     EG+    ++H +V++
Sbjct: 829  VGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 887

Query: 425  SALESN-LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            + L  N +++ N L++MY+++  +  A  VF+ M                          
Sbjct: 888  TGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM-------------------------- 921

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                     ++ D ++WN L+SG   +   ++       M+  G  P+  ++   L +  
Sbjct: 922  ---------VEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCA 972

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
             L  +  G + H   L+ GLD D+ V  +L+ +Y +  C     +VF  M   + V+WNS
Sbjct: 973  SLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNS 1032

Query: 604  LISGYC----------------FKG-------LFVNAKKMLNQMEEEEIK---------- 630
            +I                     +G        F+N    ++ +   E+           
Sbjct: 1033 VIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKY 1092

Query: 631  ---PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                D    N+L+S Y   G+  E   I   M  +    + V+W S+ISG + NE   ++
Sbjct: 1093 CLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET---RDEVSWNSMISGYIHNELLHKA 1149

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            +     M Q+  + +S T +++L  C  +  L+ G E+H   ++     D  V + L+DM
Sbjct: 1150 MDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDM 1209

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT- 806
            YSK G +  A   F     + + SWN MI G+A +G+G++A+ LF  ++  G  PD +  
Sbjct: 1210 YSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAP 1269

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
               +L+AC + G VEEG+++F SMS  Y + P +EH+SCMVDLLG+AG LDE  DFI +M
Sbjct: 1270 LLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSM 1329

Query: 867  PFKPDATIWGALLGS-CRIHG-HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
            P KP+  IW  +LG+ CR +G + E    A+  L +LEP N+ NY L+ N+ A   +WED
Sbjct: 1330 PMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWED 1389

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
            V + R +M E  VK     SW+ +   VHVF A    HP    IY +L  L  +M+  GY
Sbjct: 1390 VAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGY 1449

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            +P T+    D++ E K ++L  H+EK+A+ + L + +S  PIR++KN RVC DCH+A  Y
Sbjct: 1450 IPQTKYALFDLELENKEELLSYHSEKIAVAFVLTR-QSALPIRIMKNLRVCGDCHSAFGY 1508

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S + GR+I LRD  RFHHF +G+CSC D W
Sbjct: 1509 ISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  163 bits (413), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 191/800 (23%), Positives = 324/800 (40%), Gaps = 111/800 (13%)

Query: 164  PNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFR---CLSSVKSKHAQMIKM 220
            PN  T S   L +    T       +  SS   F +  N+++   C    +  H Q IK 
Sbjct: 515  PNQCTKSLQDL-VDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKY 573

Query: 221  GKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLE 280
            G + N   +  +LI  Y+  GD  SA K F    +R+   W+  +  Y    G+  E   
Sbjct: 574  GFVGNLF-LSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ-NGKPDEACA 631

Query: 281  VWGELHGKGVIFRSRILTIILKLCTK--LMAFWLGVEVHASLIKRGFDFDVHLKCALMNF 338
             + ++   G I         L+ C +       LGV++H  + K  +  DV +   L++ 
Sbjct: 632  RFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISM 691

Query: 339  YGKCRD-VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS----SAK 393
            YG C D    A  +F  +  + + + WN II V  R     +A  LF  MQ      S K
Sbjct: 692  YGSCLDSANDARSVFDRIG-IRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFK 750

Query: 394  AISRTIVKMLQ-ACAKVG-AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                T   ++  AC+ V       +Q+   V KS    +L V + L+S ++R    + A 
Sbjct: 751  PNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAK 810

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
             +F+ M   N+ S N ++         + A  +F++M                       
Sbjct: 811  NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKD--------------------- 849

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL----KYGRESHGYILRNGL-DYD 566
                    L G+       N  S  V+L A +E  +L    + GRE H +++R GL D  
Sbjct: 850  --------LVGI-------NSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNK 894

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            + +G  L++MY K+  + +A  VF+ M  ++ V+WNSLISG        +A +   +M  
Sbjct: 895  VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRR 954

Query: 627  EEIKP-----------------------------------DLVSWNSLVSGYSIWGQSKE 651
                P                                   D+   N+L++ Y+  G   E
Sbjct: 955  TGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTE 1014

Query: 652  ALVIIHHMKNSGIYPNVVTWTSLISGSLQNE-NYRESLKFFIQMQQEDIKPNSTTMSSLL 710
             L +   M       + V+W S+I     +E +  +++K+F++M +     +  T  ++L
Sbjct: 1015 CLKVFSLMPEY----DQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINIL 1070

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF-RKSANKTL 769
                 L L +   +IH L LK     D  +   L+  Y K G +    ++F R S  +  
Sbjct: 1071 SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 1130

Query: 770  ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF-- 827
             SWN MI G+       +A+ L   +++ G + D+ TF  +L+AC +   +E G +    
Sbjct: 1131 VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHAC 1190

Query: 828  ---DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
                 M +D  +       S +VD+  K G +D A  F   MP + +   W +++     
Sbjct: 1191 GIRACMESDVVV------GSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYAR 1243

Query: 885  HGHLEYA-EIASRRLFKLEP 903
            HGH E A ++ +R +   +P
Sbjct: 1244 HGHGEKALKLFTRMMLDGQP 1263



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 177/424 (41%), Gaps = 39/424 (9%)

Query: 214  HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
            HA +I+ G   N   +   L+  Y + G    A   F L   +    W+S +   +    
Sbjct: 882  HAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQ--N 939

Query: 274  EVQE-LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            E  E   E +  +   G +  +  L   L  C  L    LG ++H   +K G D DV + 
Sbjct: 940  ECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVS 999

Query: 333  CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE-KWENAIKLFREMQFSS 391
             AL+  Y +        K+FS + +  D + WN +I     +E     A+K F EM    
Sbjct: 1000 NALLALYAETGCFTECLKVFSLMPEY-DQVSWNSVIGALSDSEASVSQAVKYFLEMMRGG 1058

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                  T + +L A + +       QIH  VLK  L  + ++ N L+S Y +        
Sbjct: 1059 WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGK-------- 1110

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
                                    G ++    +F +M+ +R   D ++WN ++SG+  + 
Sbjct: 1111 -----------------------CGEMNECEKIFARMSETR---DEVSWNSMISGYIHNE 1144

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                 + L+  M   G R +  + + VL A   +  L+ G E H   +R  ++ D+ VG+
Sbjct: 1145 LLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGS 1204

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            +L+DMY K   +  A   F+ M  RN+ +WNS+ISGY   G    A K+  +M  +   P
Sbjct: 1205 ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP 1264

Query: 632  DLVS 635
            D V+
Sbjct: 1265 DHVA 1268



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 142/309 (45%), Gaps = 14/309 (4%)

Query: 189  SCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAA 247
            SC S G+  L E             H   +K+G   ++D  V  +L+  Y E G FT   
Sbjct: 970  SCASLGWIMLGE-----------QIHCDGLKLG--LDTDVSVSNALLALYAETGCFTECL 1016

Query: 248  KAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL 307
            K F L        W+S +         V + ++ + E+   G          IL   + L
Sbjct: 1017 KVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSL 1076

Query: 308  MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
                +  ++HA ++K     D  +  AL++ YGKC ++    K+F+ +S+  D++ WN +
Sbjct: 1077 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 1136

Query: 368  IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
            I   + NE    A+ L   M     +  S T   +L ACA V     G ++H   +++ +
Sbjct: 1137 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACM 1196

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            ES++ V + L+ MYS+  +++ A+R F+ M   N+ SWNSMIS Y   G+ + A  LF +
Sbjct: 1197 ESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTR 1256

Query: 488  MNSSRIQPD 496
            M      PD
Sbjct: 1257 MMLDGQPPD 1265


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/642 (34%), Positives = 340/642 (52%), Gaps = 35/642 (5%)

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
            + S+ ++Y  +G +D A S      SSR    I  WN LL+     GS    L + R + 
Sbjct: 47   FPSLAAAYARVGALDAAESTLAASPSSR--SCIPAWNALLAARSRAGSPGAALRVFRALP 104

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            S   RP+ ++ ++ L A   L  L             G   D++V ++L+ +Y +   + 
Sbjct: 105  S-SARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMG 163

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---- 640
            +A  VFD M  ++ VAW+++++G+   G  V A  M ++M E  +  D V    ++    
Sbjct: 164  DAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACT 223

Query: 641  -SGYSIWGQSKEALVIIHHMKNSGI--------------------------YPNVVTWTS 673
             +G +  G S     + H M+   +                          Y N V+W +
Sbjct: 224  LTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNA 283

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            LISG  QN +  E+L  F +M    ++P+S  + S L  C  +G L+ GK IH   L+  
Sbjct: 284  LISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRL 343

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
              +   + T ++DMYSK G+L+SAR++F K +++ L  WN MI     +G G +A+ LF 
Sbjct: 344  EFQ-CILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQ 402

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            EL ETG +PD  TF +LL+A  +SGLVEEG  +FD M T++ I PT +H  C+VDLL ++
Sbjct: 403  ELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARS 462

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G ++EA + + +M  +P   IW ALL  C  +  LE  E  ++++ + +P +     L+ 
Sbjct: 463  GLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVS 522

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            NL A + +W+ V  +R  M + G K V  +S I++    H F  E   HP   EI   + 
Sbjct: 523  NLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMIS 582

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L  EM+K+GYVP T  VY D+DE+ K ++L  H+E+LAI +GL+ T     + +IKN R
Sbjct: 583  KLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLR 642

Query: 1034 VCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            VC DCH A KY+S +  REI +RD  RFHHF++G CSC D W
Sbjct: 643  VCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 199/442 (45%), Gaps = 73/442 (16%)

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           S   T+ L  C +L        V       G+  DV +  AL++ Y +C  +  A ++F 
Sbjct: 111 STTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFD 170

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
            +   +D + W+ ++   +   +   A+ ++  M+          +V ++QAC   G   
Sbjct: 171 GMPR-KDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTR 229

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G  +HG  L+  +  ++ +   L+ MY++N   ++A +VF  M   N  SWN++IS + 
Sbjct: 230 MGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFA 289

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G+ D A  LF +M++S +QPD                                  +G+
Sbjct: 290 QNGHADEALDLFREMSTSGLQPD----------------------------------SGA 315

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            VS +L A  ++  LK G+  HG+ILR  L++   +GT+++DMY K   L++A+++F+ +
Sbjct: 316 LVSALL-ACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKL 373

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG----------- 642
            +R++V WN++I+     G   +A  +  ++ E  IKPD  ++ SL+S            
Sbjct: 374 SSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 433

Query: 643 ---------YSIWGQSKEALVIIHHMKNSGIY-------------PNVVTWTSLISGSLQ 680
                    + I    K  + ++  +  SG+              P +  W +L+SG L 
Sbjct: 434 FWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLN 493

Query: 681 NENYR--ESL-KFFIQMQQEDI 699
           N+     E++ K  ++ Q EDI
Sbjct: 494 NKKLELGETIAKKILESQPEDI 515



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/499 (22%), Positives = 208/499 (41%), Gaps = 106/499 (21%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           WN ++  + R      A+++FR +  SSA+  S T    L ACA++G     + +     
Sbjct: 80  WNALLAARSRAGSPGAALRVFRALP-SSARPDSTTFTLALTACARLGDLDAAEAVRVRAF 138

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            +    ++ VC+ L+ +YSR   +  A RVFD M   +  +W++M++ +   G    A  
Sbjct: 139 AAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALG 198

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           ++++M                     HG  ++ + ++                 V+QA T
Sbjct: 199 MYSRMRE-------------------HGVAEDEVVMVG----------------VIQACT 223

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
                + G   HG  LR+G+  D+ + TSL+DMY KN     A++VF  M  RN V+WN+
Sbjct: 224 LTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNA 283

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPD---LVS------------------------- 635
           LISG+   G    A  +  +M    ++PD   LVS                         
Sbjct: 284 LISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRL 343

Query: 636 ------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                   +++  YS  G  + A  + + + +     ++V W ++I+    +    ++L 
Sbjct: 344 EFQCILGTAVLDMYSKCGSLESARKLFNKLSSR----DLVLWNAMIACCGTHGCGHDALA 399

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK---------------EIHCLCLKNGF 734
            F ++ +  IKP+  T +SLL      GL++ GK               E HC+C     
Sbjct: 400 LFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVC----- 454

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFH 793
                    ++D+ ++SG ++ A E+        T+  W  ++ G       +    +  
Sbjct: 455 ---------VVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAK 505

Query: 794 ELLETGFQPDAITFTALLA 812
           ++LE+  QP+ I   AL++
Sbjct: 506 KILES--QPEDIGVLALVS 522



 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 4/284 (1%)

Query: 224 WNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW 282
           +  D  V S + H Y   G    A + F     + +  WS+ +  + S G  V E L ++
Sbjct: 142 YGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPV-EALGMY 200

Query: 283 GELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
             +   GV     ++  +++ CT      +G  VH   ++ G   DV +  +L++ Y K 
Sbjct: 201 SRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKN 260

Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
              + A ++F  +    + + WN +I    +N   + A+ LFREM  S  +  S  +V  
Sbjct: 261 GHFDVARQVF-RMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSA 319

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L ACA VG    GK IHG++L+  LE    +   ++ MYS+   LE A ++F+ +   +L
Sbjct: 320 LLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDL 378

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             WN+MI+     G    A +LF ++N + I+PD  T+  LLS 
Sbjct: 379 VLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSA 422


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
            chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/763 (30%), Positives = 384/763 (50%), Gaps = 82/763 (10%)

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
             + V    D  L N +I         E A+  +R M  + A+    T   +++ CA++GA
Sbjct: 63   LAAVRSSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGA 122

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              EG+  H   ++  L                     + + V+         + NS+++ 
Sbjct: 123  LEEGRAAHSAAIRLGL---------------------VGSEVY---------TGNSLLAF 152

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRP 530
            Y  LG V  A  +F+ M       DI+TWN ++ G+ ++G     L   R M + L  + 
Sbjct: 153  YAKLGMVADAERVFDGMPVR----DIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQH 208

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            +G  +   L A      L  GRE H Y++R+GL+ D+ VGTSL+DMY K   + +A+ +F
Sbjct: 209  DGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMF 268

Query: 591  DNMKNRNIVAWNSLISGYCFKG-------LFVNAKKMLNQME------------------ 625
              M +R +V WN +I GY   G        FV  K   +Q+E                  
Sbjct: 269  ATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSL 328

Query: 626  ----------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                        +  P +V   +L+  YS  G+ K +  I   M N      +V+W ++I
Sbjct: 329  YGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNK----TLVSWNNMI 384

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            +  +  E Y E++  F+++  + + P+  TMS+++     LGLL+  +++H   ++  + 
Sbjct: 385  AAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYG 444

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
            ++  V   ++ MY++ G++ S+R++F K A K + SWN +IMG+AI+G GK A+ +F E+
Sbjct: 445  ENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEM 504

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
               G QP+  TF ++L AC  SG+ +EGW  F+ M  DY IIP IEHY CM DLLG+AG 
Sbjct: 505  KSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGD 564

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L E   FI ++P  P   IWG+LL + R    ++ AE A+ R+F+LE  N+  Y ++ ++
Sbjct: 565  LREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSM 624

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A + RWEDV+R+R SM E G++     S +++      F      HP +  I     H 
Sbjct: 625  YADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSKTI-----HE 679

Query: 976  VSEM--KKLGYVPDTRCVYQDIDEEEKGKVLLS-HTEKLAIVYGLMKTKSRAPIRVIKNT 1032
            VS++  +K+G     R +   I    +  ++ + H+ +LA+V+GL+ +++RAPI V KN 
Sbjct: 680  VSDVLSRKIGETDYPRNLSDPISLTSRRTIIPNKHSVRLAVVFGLISSEARAPILVKKNV 739

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C+ CH A K +S    R I + D   +H F +G C C D W
Sbjct: 740  RICNHCHHALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGDYW 782



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 242/514 (47%), Gaps = 50/514 (9%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
           +   L   ++ H+  I++G + +      SL+  Y + G    A + F     R    W+
Sbjct: 119 RLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWN 178

Query: 263 SFLEDYESFG-GEVQELLEVWGELHGKGVIFRSRILTIILKL--CTKLMAFWLGVEVHAS 319
           S ++ Y S G G +   L+ + E+H +G+  +   + II  L  C    A   G EVHA 
Sbjct: 179 SMVDGYVSNGLGALA--LDCFREMH-EGLQVQHDGVGIIAALAACCLDSALMQGREVHAY 235

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           +I+ G + DV +  +L++ Y KC  + SA  +F+ +      + WN +I     N   E 
Sbjct: 236 VIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPS-RTVVTWNCMIGGYALNGCPEE 294

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A   F +M+    +    T + +L ACA+  +   G+ +HGYV +S    ++ +   L+ 
Sbjct: 295 AFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLE 354

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MYS+  K++ +  +F  M +  L SWN+MI++Y           ++ +M           
Sbjct: 355 MYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAY-----------MYKEM----------- 392

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
                        Y   +TL   + +    P+  ++S V+ A   L LL+  R+ H YI+
Sbjct: 393 -------------YNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIV 439

Query: 560 RNGLDY--DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           R  LDY  +  V  ++M MY +   + +++++FD M  +++++WN++I GY   G    A
Sbjct: 440 R--LDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIA 497

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLIS 676
            +M ++M+   ++P+  ++ S+++  S+ G + E  +  + M ++ GI P +  +  +  
Sbjct: 498 LEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTD 557

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
              +  + RE LKF   ++   I P      SLL
Sbjct: 558 LLGRAGDLREVLKF---IESIPITPTFRIWGSLL 588



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 33/375 (8%)

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
           A  + + + + R  PD    N ++ G    G  +  L   R M + G RP+  +  VV++
Sbjct: 56  AGRMHDALAAVRSSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVK 115

Query: 541 AVTELRLLKYGRESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
               L  L+ GR +H   +R GL   ++Y G SL+  Y K   + +A+ VFD M  R+IV
Sbjct: 116 CCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIV 175

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSI-----WGQSKEAL 653
            WNS++ GY   GL   A     +M E  +++ D V   + ++   +      G+   A 
Sbjct: 176 TWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAY 235

Query: 654 VIIHHMKNS---------------------GIYP-----NVVTWTSLISGSLQNENYRES 687
           VI H ++                       G++       VVTW  +I G   N    E+
Sbjct: 236 VIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEA 295

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
              F+QM+ E  +    T  +LL  C        G+ +H    ++ F+    + T L++M
Sbjct: 296 FDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEM 355

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           YSK G +KS+  +F +  NKTL SWN MI  +       EAI LF ELL     PD  T 
Sbjct: 356 YSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTM 415

Query: 808 TALLAACKNSGLVEE 822
           +A++ A    GL+ +
Sbjct: 416 SAVVPAFVLLGLLRQ 430



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 10/259 (3%)

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
           S  SLV  ++  G+  +AL  +    ++ ++ NVV     I G         +L  +  M
Sbjct: 45  SLKSLVLSHAAAGRMHDALAAVRSSPDAFLH-NVV-----IRGFADAGLPEAALAAYRAM 98

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI-KDAYVATGLIDMYSKSGN 753
                +P+  T   +++ C  LG L+ G+  H   ++ G +  + Y    L+  Y+K G 
Sbjct: 99  LAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGM 158

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLA 812
           +  A  VF     + + +WN M+ G+   G G  A+  F E+ E    Q D +   A LA
Sbjct: 159 VADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALA 218

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
           AC     + +G +   +    + +   ++  + ++D+  K G +  A     TMP +   
Sbjct: 219 ACCLDSALMQG-REVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVV 277

Query: 873 TIWGALLGSCRIHGHLEYA 891
           T W  ++G   ++G  E A
Sbjct: 278 T-WNCMIGGYALNGCPEEA 295


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/603 (35%), Positives = 336/603 (55%), Gaps = 54/603 (8%)

Query: 527  GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            GF     + + +L      R  + G+  H ++++      +++ T L+ +Y K D L +A
Sbjct: 238  GFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDA 297

Query: 587  QEVFDNMKNRNIVAWNSLIS-----GYCFKGL---FVNAKKMLNQMEEEE---------- 628
              VFD M  RN+V+W ++IS     GY  + L   F + K  L  +   +          
Sbjct: 298  HNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRP 357

Query: 629  ---IKPDLVSWNSLVSGYS-----IWGQSKEALVII---------------HHMKNSGIY 665
                +P+  ++ ++++  +     I G+   +L+I                 + K+  I+
Sbjct: 358  WVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIH 417

Query: 666  P-----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
                        +VV+ T++ISG  Q     E+L+ F ++Q E +K N  T + +L    
Sbjct: 418  EARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALS 477

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
            GL  L  GK++H   L++       +   LIDMYSK GNL  +R +F     +T+ SWN 
Sbjct: 478  GLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNA 537

Query: 775  MIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST- 832
            M++G++ +G G+E + LF  + E T  +PD++T  A+L+ C + GL ++G   F+ MS+ 
Sbjct: 538  MLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSG 597

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
               + P +EHY C+VDLLG++G ++EA++FI+ MPF+P A IWG+LLG+CR+H +++  E
Sbjct: 598  KIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGE 657

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
             A ++L ++EP N+ NY ++ NL A + RWEDV  LR  M +  V      S I++DQ++
Sbjct: 658  FAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVL 717

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            H F A    HP   EI  ++  L +  K++GYVPD  CV  D+DEE+K K+LL H+EKLA
Sbjct: 718  HTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLA 777

Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
            + +GL+ + +  PIRVIKN R+C DCH  AKY+S V GRE+ LRD  RFH    G+CSC 
Sbjct: 778  LSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCE 837

Query: 1073 DCW 1075
            D W
Sbjct: 838  DYW 840



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 204/462 (44%), Gaps = 67/462 (14%)

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
           Q LL++   LHG  + F +     IL  C    AF  G  VHA +IK  +   V L+  L
Sbjct: 229 QPLLQM--ALHGFNMKFEN--YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRL 284

Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF---REMQFSSA 392
           +  Y KC  +  A+ +F E+ +  + + W  +I    +      A+ LF    ++  +  
Sbjct: 285 IVLYTKCDSLGDAHNVFDEMPE-RNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGV 343

Query: 393 KAISR------------------TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            AI +                  T   +L +C     F  G+QIH  ++K   E ++ V 
Sbjct: 344 YAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVG 403

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           + L+ MY+++ K+  A  VF+ + + ++ S  ++IS Y  LG  + A  LF ++    ++
Sbjct: 404 SSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMK 463

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
            + +T             Y  VLT L G+ +L                        G++ 
Sbjct: 464 SNYVT-------------YTGVLTALSGLAALDL----------------------GKQV 488

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H ++LR+ +   + +  SL+DMY K   L  ++ +FD M  R +++WN+++ GY   G  
Sbjct: 489 HNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEG 548

Query: 615 VNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI--YPNVVTW 671
               K+   M EE ++KPD V+  +++SG S  G   + L I + M +  I   P +  +
Sbjct: 549 REVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHY 608

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++    ++    E+ +F  +M  E   P +    SLL  C
Sbjct: 609 GCVVDLLGRSGRVEEAFEFIKKMPFE---PTAAIWGSLLGAC 647



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 203/453 (44%), Gaps = 70/453 (15%)

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+F +  AI       L  C    AF EG+++H +++K+    ++ +   LI +Y++ + 
Sbjct: 241 MKFENYNAI-------LNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 293

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           L  A  VFD M + N+ SW +MIS+Y+  GY   A +LF     + ++  +     +   
Sbjct: 294 LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLF----FADVKISLTGVYAIDKL 349

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
             ++ +   V T           PN  + + VL + T       GR+ H  I++   +  
Sbjct: 350 KLSNPNRPWVCT----------EPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDH 399

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           ++VG+SL+DMY K+  +  A+ VF+ +  R++V+  ++ISGY   GL   A ++  +++ 
Sbjct: 400 VFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQG 459

Query: 627 EEIKPDLVSW-----------------------------------NSLVSGYSIWGQSKE 651
           E +K + V++                                   NSL+  YS  G    
Sbjct: 460 EGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTY 519

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLL 710
           +  I   M        V++W +++ G  ++   RE LK F  M++E  +KP+S T+ ++L
Sbjct: 520 SRRIFDTMYER----TVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVL 575

Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIK-----DAYVATGLIDMYSKSGNLKSAREVFRKSA 765
             C   GL   G  I    + +G I+     + Y    ++D+  +SG ++ A E  +K  
Sbjct: 576 SGCSHGGLEDKGLNIFN-DMSSGKIEVEPKMEHYGC--VVDLLGRSGRVEEAFEFIKKMP 632

Query: 766 -NKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
              T A W  ++    ++ N         +LLE
Sbjct: 633 FEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLE 665



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 24/340 (7%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            LNE    R     +  HA MIK  +   S  +   LI  Y +      A   F     R
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKT-RYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 307

Query: 257 SYADWSSFLEDYESFGGEVQEL----LEVWGELHGKGVIFRSRI---------------- 296
           +   W++ +  Y   G   Q L     +V   L G   I + ++                
Sbjct: 308 NVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFT 367

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              +L  CT  + F LG ++H+ +IK  ++  V +  +L++ Y K   +  A  +F  + 
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D +    II    +    E A++LFR +Q    K+   T   +L A + + A   GK
Sbjct: 428 E-RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGK 486

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+H +VL+S + S + + N LI MYS+   L  + R+FD+M +  + SWN+M+  Y+  G
Sbjct: 487 QVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHG 546

Query: 477 YVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQN 515
                  LF  M   ++++PD +T   +LSG  +HG  ++
Sbjct: 547 EGREVLKLFTLMREETKVKPDSVTILAVLSG-CSHGGLED 585


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/504 (37%), Positives = 304/504 (60%), Gaps = 11/504 (2%)

Query: 576  MYVK---NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-LFVNAKKMLNQMEEEEIKP 631
            MY K   +  + ++++VF+ M   N+++W ++I+ Y   G     A ++  +M    +  
Sbjct: 1    MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVN- 59

Query: 632  DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
                 NSL+S Y+  G+ ++A      +       N+V++ +++ G  +N    E+   F
Sbjct: 60   --CVGNSLISMYARSGRMEDARKAFDIL----FEKNLVSYNAIVDGYAKNLKSEEAFLLF 113

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             ++    I  ++ T +SLL     +G +  G++IH   LK G+  +  +   LI MYS+ 
Sbjct: 114  NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 173

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            GN+++A +VF +  ++ + SW  MI GFA +G    A+ +FH++LETG +P+ IT+ A+L
Sbjct: 174  GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 233

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            +AC + G++ EG K+F+SM  ++ I+P +EHY+CMVDLLG++G L EA +FI +MP   D
Sbjct: 234  SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 293

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
            A +W  LLG+CR+HG+ E    A+  + + EP + A Y L+ NL A + +W+DV ++R S
Sbjct: 294  ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 353

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M E  +      SWI+++  VH F      HP   +IY EL  L S++K++GY+PDT  V
Sbjct: 354  MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 413

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              DI+EE+K + L  H+EK+A+ +GL+ T    PIR+ KN RVC DCHTA KY+S+  GR
Sbjct: 414  LHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGR 473

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD  RFHH + G CSCND W
Sbjct: 474  EIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 3/174 (1%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           +L++ Y +   +E A K F  +   E +L+ +N I+    +N K E A  LF E+  +  
Sbjct: 64  SLISMYARSGRMEDARKAFDIL--FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 121

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
              + T   +L   A +GA  +G+QIHG +LK   +SN  +CN LISMYSR   +E A +
Sbjct: 122 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 181

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           VF+ M+D N+ SW SMI+ +   G+   A  +F+KM  +  +P+ IT+  +LS 
Sbjct: 182 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 235



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 36/244 (14%)

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N LISMY+R+ ++E A + FD + + NL S+N+++  Y      + A+ LFN++  + 
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           I     T+  LLSG  + G+                                   +  G 
Sbjct: 121 IGISAFTFASLLSGAASIGA-----------------------------------MGKGE 145

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + HG +L+ G   +  +  +L+ MY +   ++ A +VF+ M++RN+++W S+I+G+   G
Sbjct: 146 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 205

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
               A +M ++M E   KP+ +++ +++S  S  G   E     + M K  GI P +  +
Sbjct: 206 FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY 265

Query: 672 TSLI 675
             ++
Sbjct: 266 ACMV 269



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 134/296 (45%), Gaps = 7/296 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  Y   G    A KAF + F ++   +++ ++ Y     + +E   ++ E+   G+ 
Sbjct: 64  SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK-NLKSEEAFLLFNEIADTGIG 122

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +     +L     + A   G ++H  L+K G+  +  +  AL++ Y +C ++E+A ++
Sbjct: 123 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 182

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+E+ D  + + W  +I    ++     A+++F +M  +  K    T V +L AC+ VG 
Sbjct: 183 FNEMED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 241

Query: 412 FHEG-KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
             EG K  +    +  +   +    C++ +  R+  L  A    +SM    +   W +++
Sbjct: 242 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 301

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTHGSYQNVLTLLRGMQ 524
            +    G  ++       +     +PD      LLS  H + G +++V+ + + M+
Sbjct: 302 GACRVHGNTELGRHAAEMILEQ--EPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 355


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/668 (32%), Positives = 341/668 (51%), Gaps = 78/668 (11%)

Query: 486  NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE- 544
            +KM     Q D+ +W  L+SG    G   +VL L   MQ  G  PN  ++S+VL++ +  
Sbjct: 341  HKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSN 400

Query: 545  LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA---- 600
            +   + G+  HG+ILRNGLD D  +  S++D YVK  C   A+++F  M  ++ V+    
Sbjct: 401  VNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIM 460

Query: 601  ---------------------------WNSLISGYCFKG--------------------- 612
                                       WN++I G    G                     
Sbjct: 461  MSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNK 520

Query: 613  --------------LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
                          +    K++  Q+ +  +  D    NSL+  Y   G+ ++A VI  H
Sbjct: 521  LTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKH 580

Query: 659  MKNSGIYPNV-----------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
            +       N            V+W+S++SG +QN  + ++LK F  M    ++ +  T++
Sbjct: 581  LPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLT 640

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            S++  C   G+L+ G+++H    K G   D ++ + +IDMY K G+L  A  +F ++ ++
Sbjct: 641  SVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDR 700

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             +  W  MI G A++G G+EA+ LF  ++  G  P+ ++F  +L AC ++GL+EEG KYF
Sbjct: 701  NVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYF 760

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
              M   Y I P  EH++CMVDL G+AG L+E  +FI        +++W + L SCR+H +
Sbjct: 761  RLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKN 820

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
            +E      ++L +LEP ++  Y L  ++ A  +RWE+  ++R  M + GVK     SWIQ
Sbjct: 821  IEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQ 880

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +   VH F      HP   +IY  L  L+  +K++GY  D   V QD+++E++  +L  H
Sbjct: 881  LKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYH 940

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLAI YG++ T    PIRV+KN RVC DCH   KY S + GREI +RD  RFHHF+ G
Sbjct: 941  SEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHG 1000

Query: 1068 ECSCNDCW 1075
             CSC D W
Sbjct: 1001 HCSCADYW 1008



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 250/565 (44%), Gaps = 69/565 (12%)

Query: 316 VHASLIKRGFDFDVHLKCA-LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           +HA LIK G    V ++   L+N Y K +++E A+K+F E+    D   W  +I    R 
Sbjct: 310 LHAKLIKNGC---VGIRGNHLLNLYAKSQNLEQAHKMFEEIPQ-TDVFSWTVLISGFARI 365

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAK-VGAFHEGKQIHGYVLKSALESNLSV 433
               + + LF +MQ         T+  +L++C+  V     GK IHG++L++ L+ +  +
Sbjct: 366 GLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVL 425

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N ++  Y +      A ++F  M + +  SWN M+SSY  +G +  +  LF ++     
Sbjct: 426 NNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPG--- 482

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
             D  +WN ++ G   +G  +  L LL  M + G   N  + S+ L   + L +L  G++
Sbjct: 483 -KDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQ 541

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI--------------- 598
            H  +L+ G+  D +V  SL+DMY K   ++ A  +F ++   +                
Sbjct: 542 IHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVES 601

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG---------------- 642
           V+W+S++SGY   G F +A K  + M   +++ D  +  S+VS                 
Sbjct: 602 VSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGY 661

Query: 643 -------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                              Y   G   +A +I +  K+     NVV WTS+ISG   +  
Sbjct: 662 IQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDR----NVVLWTSMISGCALHGQ 717

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVAT 742
            RE+++ F  M  E I PN  +   +L  C   GLL+ G K    +    G    A   T
Sbjct: 718 GREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFT 777

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            ++D+Y ++G L   +E    +A   L+S W   +    ++ N +  I +  +LLE   +
Sbjct: 778 CMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLE--LE 835

Query: 802 P-DAITFTALLAACKNSGLVEEGWK 825
           P DA  +    + C      EE  K
Sbjct: 836 PFDAGPYILFSSICATEHRWEEAAK 860



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 229/495 (46%), Gaps = 58/495 (11%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA++IK G +    + + +L   Y +  +   A K F          W+  +  +   G 
Sbjct: 311 HAKLIKNGCVGIRGNHLLNL---YAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTK-LMAFWLGVEVHASLIKRGFDFDVHLK 332
              ++L ++ ++  +GV      L+I+LK C+  +    +G  +H  +++ G D D  L 
Sbjct: 368 SA-DVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLN 426

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +++++Y KCR    A KLF  +++ +D + WN ++   L+    + ++ LFR++    A
Sbjct: 427 NSILDYYVKCRCFGYAEKLFGLMAE-KDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDA 485

Query: 393 KAISRTIVKMLQ-ACAKVG------------AFHE------------------GKQIHGY 421
            + +  I  +++  C +V             AF++                  GKQIH  
Sbjct: 486 ASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQ 545

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           VLK  +  +  V N LI MY +  ++E A+ +F      +L   +SM++S        V 
Sbjct: 546 VLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFK-----HLPQESSMMNSEESCDDAVV- 599

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                         + ++W+ ++SG+  +G +++ L     M       +  +++ V+ A
Sbjct: 600 --------------ESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSA 645

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                +L+ GR+ HGYI + G   D+++G+S++DMYVK   L +A  +F+  K+RN+V W
Sbjct: 646 CASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLW 705

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            S+ISG    G    A ++   M  E I P+ VS+  +++  S  G  +E       M+ 
Sbjct: 706 TSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMRE 765

Query: 662 S-GIYPNVVTWTSLI 675
             GI P    +T ++
Sbjct: 766 VYGIRPGAEHFTCMV 780



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 21/212 (9%)

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
           N + +H   +KNG +        L+++Y+KS NL+ A ++F +     + SW  +I GFA
Sbjct: 306 NSEVLHAKLIKNGCV--GIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFA 363

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS------GLVEEGWKYFDSMSTDY 834
             G   + + LF ++ + G  P+  T + +L +C ++      G    GW   + +  D 
Sbjct: 364 RIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDA 423

Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
            +  +I  Y          GY ++ +  +     + D   W  ++ S    G ++     
Sbjct: 424 VLNNSILDYYVKCRCF---GYAEKLFGLMA----EKDTVSWNIMMSSYLQIGDMQ----K 472

Query: 895 SRRLFKLEPC-NSANYNLMMNLLAMSNRWEDV 925
           S  LF+  P  ++A++N M++ L M N  E V
Sbjct: 473 SVDLFRQLPGKDAASWNTMIDGL-MRNGCERV 503


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/569 (35%), Positives = 314/569 (55%), Gaps = 32/569 (5%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            +LQ+    + ++ G++ H  I + G+ ++  + T L+++Y   + L NA  +FD +  RN
Sbjct: 7    LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRN 66

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
            +  WN +I GY + G +  A  +  QM +  + PD  ++  ++   S     +E   I  
Sbjct: 67   LFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHK 126

Query: 658  HMKNSGIYPNV-------------------------------VTWTSLISGSLQNENYRE 686
             +  SG+  +V                               V W S+++   QN    E
Sbjct: 127  DVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDE 186

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            SL     M    +KP   T    +      GLL  GKE+H    ++GF  +  V T L+D
Sbjct: 187  SLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMD 246

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY+KSG++  AR +F     K + SWN MI G+A++G+  EA+ LF E+ +    PD IT
Sbjct: 247  MYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHIT 305

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F  +LAAC + GL+ EG  +F SM +D+NI PT++HY+CM+DLLG  G L+EA+  I  M
Sbjct: 306  FVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEM 365

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              +PDA +WGALL SC+IHG++E  E+A  +L +LEP +  NY ++ N+ A + +W+ V 
Sbjct: 366  RVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVA 425

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            RLR  M   G+K  +  SWI++   VH F +E   HP +  IY EL      MK+ GY P
Sbjct: 426  RLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAP 485

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
                V+ D++++EK  ++  H+E+LAI +GL+ T +   + +IKN R+C DCH A K++S
Sbjct: 486  QVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFIS 545

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +  REI +RD  R+HHF++G CSC D W
Sbjct: 546  KITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 207/425 (48%), Gaps = 41/425 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C    A   G ++HA + + G  F+  L   L+N Y  C  + +A+ LF  +S   
Sbjct: 7   LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK-R 65

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +  LWN +I     N  +E AI L+ +M+         T   +L+AC+ + A  EGK+IH
Sbjct: 66  NLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIH 125

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
             V++S LES++ V   LI MY++   +E A +VFD + + ++  WNSM+++Y+  G   
Sbjct: 126 KDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG--- 182

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                         QPD                    L L R M   G +P   +  + +
Sbjct: 183 --------------QPD------------------ESLALCRVMAFNGLKPTEGTFVISI 210

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A  +  LL  G+E HGY  R+G + +  V T+LMDMY K+  +  A+ +F+ ++ + +V
Sbjct: 211 AASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVV 270

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +WN++I+GY   G    A  +  +M + ++ PD +++  +++  S  G   E  +    M
Sbjct: 271 SWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSM 329

Query: 660 -KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
             +  I+P V  +T +I          E+ K  ++M+   ++P++    +LL +C   G 
Sbjct: 330 ISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMR---VEPDAGVWGALLHSCKIHGN 386

Query: 719 LQNGK 723
           ++ G+
Sbjct: 387 VEMGE 391



 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 156/305 (51%), Gaps = 5/305 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           K  HA++ ++G  +N   +   L+  Y      T+A   F     R+   W+  +  Y +
Sbjct: 21  KQLHARICQVGISFNPL-LATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGY-A 78

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
           + G  +  + ++ ++   G++        +LK C+ L A   G ++H  +I+ G + DV 
Sbjct: 79  WNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVF 138

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +  AL++ Y KC  VESA ++F ++ D  D + WN ++    +N + + ++ L R M F+
Sbjct: 139 VGAALIDMYAKCGCVESARQVFDKI-DERDVVCWNSMLATYSQNGQPDESLALCRVMAFN 197

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             K    T V  + A A  G   +GK++HGY  +   ESN  V   L+ MY+++  + +A
Sbjct: 198 GLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVA 257

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             +F+ +++  + SWN+MI+ Y   G+ + A  LF +M   ++ PD IT+  +L+   +H
Sbjct: 258 RSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-GKVLPDHITFVGVLAA-CSH 315

Query: 511 GSYQN 515
           G   N
Sbjct: 316 GGLLN 320



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 190/437 (43%), Gaps = 75/437 (17%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ+C    A   GKQ+H  + +  +  N  +   L+++Y   N L  A  +FD +   N
Sbjct: 7   LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRN 66

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           L  WN MI  Y                           WN         G Y+  ++L  
Sbjct: 67  LFLWNVMIRGYA--------------------------WN---------GPYELAISLYY 91

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M+  G  P+  +   VL+A + L  ++ G++ H  ++R+GL+ D++VG +L+DMY K  
Sbjct: 92  QMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCG 151

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP---------- 631
           C+++A++VFD +  R++V WNS+++ Y   G    +  +   M    +KP          
Sbjct: 152 CVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIA 211

Query: 632 -----DLVSWNSLVSGYSIW-------GQSKEALVIIHHMKNS-----GIY-----PNVV 669
                 L+     + GYS W        + K AL+ ++    S      ++       VV
Sbjct: 212 ASADNGLLPQGKELHGYS-WRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVV 270

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           +W ++I+G   + +  E+L  F +M+ + + P+  T   +L  C   GLL  GK +H   
Sbjct: 271 SWNAMITGYAMHGHANEALDLFKEMKGK-VLPDHITFVGVLAACSHGGLLNEGK-MHFRS 328

Query: 730 LKNGFIKDAYVA--TGLIDMYSKSGNLKSA-REVFRKSANKTLASWNCMIMGFAIYGNGK 786
           + + F     V   T +ID+    G L+ A + +           W  ++    I+GN +
Sbjct: 329 MISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVE 388

Query: 787 EAILLFHELLETGFQPD 803
              L   +L+E   +PD
Sbjct: 389 MGELALEKLVE--LEPD 403



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 2/175 (1%)

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           +SLLQ+C     ++ GK++H    + G   +  +AT L+++Y    +L +A  +F + + 
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
           + L  WN MI G+A  G  + AI L++++ + G  PD  TF  +L AC     +EEG K 
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
              +     +   +   + ++D+  K G ++ A      +  + D   W ++L +
Sbjct: 125 HKDVIRS-GLESDVFVGAALIDMYAKCGCVESARQVFDKIDER-DVVCWNSMLAT 177


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 640

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/613 (35%), Positives = 320/613 (52%), Gaps = 47/613 (7%)

Query: 467  SMISSYTGL---GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH-FTHGSYQNVLTLLRG 522
            S I S+  L   G +  A  LF ++     +PDI   N L+  + F+      V+     
Sbjct: 71   SRILSFAALSPHGSIPYARFLFYRIR----KPDIFIANTLIRAYAFSPNPIDAVVFYSEM 126

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
             +S    P+  +  ++L+A +E+  L+ G   H ++ + G   ++ V   L+ MY     
Sbjct: 127  TESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGL 186

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
            +++A  VFD                 C                      D  SWN ++ G
Sbjct: 187  IESAGLVFDRTPE-------------C----------------------DGASWNIMIGG 211

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
            Y   G  K A  +   M +     +VV+W+ +I+G +Q   ++E L  F  M  E I+PN
Sbjct: 212  YLKCGVFKSARRMFEAMPDR----DVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPN 267

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
             + + + L  C  LG ++ G+ I     +        + T LIDMYSK G+++ A EVF 
Sbjct: 268  ESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFH 327

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            K   K + +W+ MI G AI G GK+A+ LF ++   G +P+ +TF  +L AC +S LV+E
Sbjct: 328  KMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDE 387

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G  +F SM++ Y + P   H+ CMVDL G+AG LD+A   I++MPFKP++ IWGALL +C
Sbjct: 388  GCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNAC 447

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIHG  E  E   +RL +L+P +   Y L+ N+ A   RW+ V  LR  M E  V     
Sbjct: 448  RIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPG 507

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             S+I +   +H F A  + HP    IY +L  +  E+K  GY PDT  V  D+DEEEK  
Sbjct: 508  CSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKET 567

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLAI +GL+KT     IR+ KN RVC+DCH+A K +S +  REI +RD  RFH
Sbjct: 568  ALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFH 627

Query: 1063 HFREGECSCNDCW 1075
            HFR+G CSC D W
Sbjct: 628  HFRDGSCSCMDFW 640



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 194/422 (45%), Gaps = 24/422 (5%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCR--DVESANKLFSEVSDLEDDLLWNEIIMVK 371
            ++HA  I  G   D  +   +++F        +  A  LF  +    D  + N +I   
Sbjct: 52  TQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK-PDIFIANTLIRAY 110

Query: 372 LRNEKWENAIKLFREMQFSSAKAIS-RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             +    +A+  + EM  SS       T   +L+AC+++ +   G+ IH +V K    S 
Sbjct: 111 AFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSE 170

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           +SV N L+ MY+    +E A  VFD   + + +SWN MI  Y   G    A  +F  M  
Sbjct: 171 VSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPD 230

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                D+++W+ +++G+     ++  L L + M      PN S +   L A   L  ++ 
Sbjct: 231 R----DVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQ 286

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           G+    Y+ R  +   + +GT+L+DMY K   ++ A EVF  MK +N++AW+++I+G   
Sbjct: 287 GQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAI 346

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVV 669
            G   +A  + +QME + +KP+ V++  +++  S      E     H M +  G+ PN  
Sbjct: 347 NGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAH 406

Query: 670 TWTSLI-----SGSL-QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               ++     +G L Q +   +S+ F         KPNS    +LL  C   G  + G+
Sbjct: 407 HHCCMVDLYGRAGMLDQAQTVIKSMPF---------KPNSAIWGALLNACRIHGDTELGE 457

Query: 724 EI 725
           ++
Sbjct: 458 QV 459



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 168/403 (41%), Gaps = 48/403 (11%)

Query: 172 TSLALPPTDTLAKQ-------AQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIW 224
           + L+LP    L  Q        QL C    +  L   +  + L  +   HAQ I  G   
Sbjct: 9   SPLSLPSQSNLQNQNPPWIPTPQLLC---KYPILRHLSSCKTLKDLTQIHAQTITTGIF- 64

Query: 225 NSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEV 281
            SD+ V S I  +       S   A FL++     D    ++ +  Y +F     + +  
Sbjct: 65  -SDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAY-AFSPNPIDAVVF 122

Query: 282 WGELHGKGVIFRS-RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
           + E+    V+F       ++LK C+++ +  LG  +H+ + K G+  +V +   L+  Y 
Sbjct: 123 YSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYA 182

Query: 341 KCRDVESANKLFSEVSDLE------------------------------DDLLWNEIIMV 370
            C  +ESA  +F    + +                              D + W+ +I  
Sbjct: 183 SCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMING 242

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
            ++  +++  + LF++M     +     +V  L ACA +GA  +G+ I  Y+ +  +   
Sbjct: 243 YVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLT 302

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           + +   LI MYS+   +E A  VF  MK+ N+ +W++MI+     G    A +LF++M  
Sbjct: 303 VRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEM 362

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNG 532
             ++P+ +T+  +L+            +    M S+ G +PN 
Sbjct: 363 QGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNA 405


>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/532 (37%), Positives = 304/532 (57%), Gaps = 18/532 (3%)

Query: 552  RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN--IVAWNSLISGYC 609
            R+ H  I++      +   T +  +         AQ++F  ++ +      WNS +    
Sbjct: 78   RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 137

Query: 610  FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                 ++A  +  ++ + ++ PD  + +S++           A + +  + N  I   VV
Sbjct: 138  EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVL----------RACLNLLDLSNGRILHGVV 187

Query: 670  ------TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
                  +WTS+I+G +Q    +E++  F +M++  +K N  T+ ++L  C  LG L  G 
Sbjct: 188  EKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM 247

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
             IH    ++GF ++  ++  LIDMY K G L+ A +VF +   +T+ SW+ MI G A++G
Sbjct: 248  RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 307

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
              +EA+ LF ++ + G +P+ +TF  LL AC + GL+ EG ++F SM+ DY IIP IEHY
Sbjct: 308  RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHY 367

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
             CMVDLL +AG L EA +FI  MP KP+  +WGALLG+CR+H ++E AE A + L +L+P
Sbjct: 368  GCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP 427

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             N   Y ++ N+ A + RWED  R+R  M +  VK    WS I +D +VH F A    HP
Sbjct: 428  LNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHP 487

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
             T +I+     L+ EM+  GYVP+T  V  DI+E EK K +  H+EKLA+V+GLM T + 
Sbjct: 488  DTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAE 547

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             PIR++KN R+C DCH+A K +S +  REI +RD  RFH F +  CSC D W
Sbjct: 548  TPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 175/388 (45%), Gaps = 22/388 (5%)

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
            CA   +FH  +QI   V K   E+     +CL ++   ++ ++ A  +F     + L  
Sbjct: 102 VCAFTPSFHYAQQIFKCVEKQKPET-FVWNSCLKALAEGDSPID-AIMLF-----YRLRQ 154

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII------TWNCLLSGHFTHGSYQNVLT 518
           ++    ++T    +    +L + +++ RI   ++      +W  +++G+   G  +  + 
Sbjct: 155 YDVCPDTFTCSSVLRACLNLLD-LSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIH 213

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           L   M+  G + N  +V  VL A  +L  L  G   H Y  R+G   ++ +  +L+DMYV
Sbjct: 214 LFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYV 273

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           K  CL+ A +VF+ M+ R +V+W+++I G    G    A ++ + M +  I+P+ V++  
Sbjct: 274 KCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIG 333

Query: 639 LVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           L+   S  G   E       M ++ GI P +  +  ++    +     E+ +F + M   
Sbjct: 334 LLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP-- 391

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NL 754
            +KPN     +LL  C     ++  +E     L+   + D Y    L ++Y+++G   + 
Sbjct: 392 -MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVV-LSNIYAEAGRWEDT 449

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIY 782
              R+  +    K    W+ + +   ++
Sbjct: 450 ARVRKFMKDRQVKKTPGWSSITVDGVVH 477



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 46/284 (16%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I   ++  K + AI LF +M+ +  K    T+V +L ACA +GA   G +IH Y  
Sbjct: 195 WTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSN 254

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           +   + N+ + N LI MY +   LE A +VF+ M++  + SW++MI      G  + A  
Sbjct: 255 RHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALR 314

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           LF+ M+   I+                                   PNG +   +L A +
Sbjct: 315 LFSDMSQVGIE-----------------------------------PNGVTFIGLLHACS 339

Query: 544 ELRLLKYGRESHGYILRN-GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAW 601
            + L+  GR     + R+ G+   +     ++D+  +   L  A E   NM  + N V W
Sbjct: 340 HMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVW 399

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
            +L+ G C     V       +M EE IK  L+  + L  GY +
Sbjct: 400 GALL-GACRVHKNV-------EMAEEAIK-HLLELDPLNDGYYV 434



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 3/194 (1%)

Query: 258 YADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
           +  W+S +  Y   G + +E + ++ ++   GV      +  +L  C  L A  LG+ +H
Sbjct: 192 FRSWTSMIAGYVQCG-KAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH 250

Query: 318 ASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
               + GF  +V +   L++ Y KC  +E A K+F E+ +    + W+ +I     + + 
Sbjct: 251 EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEE-RTVVSWSAMIGGLAMHGRA 309

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNC 436
           E A++LF +M     +    T + +L AC+ +G   EG++    + +   +   +    C
Sbjct: 310 EEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGC 369

Query: 437 LISMYSRNNKLELA 450
           ++ + SR   L  A
Sbjct: 370 MVDLLSRAGLLHEA 383


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 262/895 (29%), Positives = 435/895 (48%), Gaps = 82/895 (9%)

Query: 128 SQLTRQNTAIVMPKLHSIYHHFNTRTSINQN--RHSHKPNSITNSPTSLALPPTDTLAKQ 185
           S +    +AI  P++  ++    T  S  +N  R S++P  +  SP         T A Q
Sbjct: 12  SNMMYSASAISFPRVR-LHCSIPTEPSCRRNPFRQSNQPVQVP-SPKLACFDGVLTEAFQ 69

Query: 186 ----AQLSCISSGFCFLNE-TNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEF 240
               ++ +     F ++ E   K R +S  +  H+++ K    +  D +   L+F Y + 
Sbjct: 70  RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129

Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
           G    A K F     R+   W++ +  Y S  GE    L ++  +  +GV         +
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVS-NGEPASALALYWNMRVEGVPLGLSSFPAL 188

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LK C KL     G E+H+ L+K G+     +  AL++ Y K  D+ +A +LF    +  D
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
            +LWN I+     + K    ++LFREM  +     S TIV  L AC        GK+IH 
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308

Query: 421 YVLKSALESN-LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            VLKS+  S+ L VCN LI+MY+R                                G + 
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTR-------------------------------CGKMP 337

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  +  +MN++    D++TWN L+ G+  +  Y+  L     M + G + +  S++ ++
Sbjct: 338 QAERILRQMNNA----DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            A   L  L  G E H Y++++G D +L VG +L+DMY K +        F  M +++++
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI--IH 657
           +W ++I+GY      V A ++   + ++ ++ D +   S++   S+    K  L++  IH
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL---KSMLIVKEIH 510

Query: 658 -HMKNSGIY------------------------------PNVVTWTSLISGSLQNENYRE 686
            H+   G+                                +VV+WTS+IS S  N N  E
Sbjct: 511 CHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           +++ F +M +  +  +S  +  +L     L  L  G+EIHC  L+ GF  +  +A  ++D
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
           MY+  G+L+SA+ VF +   K L  +  MI  + ++G GK A+ LF ++      PD I+
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690

Query: 807 FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
           F ALL AC ++GL++EG  +   M  +Y + P  EHY C+VD+LG+A  + EA++F++ M
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750

Query: 867 PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
             +P A +W ALL +CR H   E  EIA++RL +LEP N  N  L+ N+ A   RW DVE
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810

Query: 927 RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
           ++R  M   G++     SWI++D  VH F+A    HP + EIY +L  +  ++++
Sbjct: 811 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 865


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/614 (33%), Positives = 320/614 (52%), Gaps = 71/614 (11%)

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            +P+ S  S ++Q+  + RLL+ G++ H +I  +G    L++   L++MY K D L ++Q+
Sbjct: 67   KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQK 126

Query: 589  VFDNMKNRNI-------------------------------VAWNSLISGYCFKGLFVNA 617
            +FD M  R++                                +W ++ISGY        A
Sbjct: 127  LFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEA 186

Query: 618  KKMLNQMEEEE------------------------------------IKPDLVSWNSLVS 641
             ++   M+  +                                    +  D V W++L  
Sbjct: 187  LELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSD 246

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             Y   G  +EA     H+ +  +  ++VTWT++I    Q+   +E    F  + +  I+P
Sbjct: 247  MYGKCGSIEEA----RHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRP 302

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            N  T S +L  C      + GK++H    + GF   ++ A+ L+ MYSK GN+ SA  VF
Sbjct: 303  NEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVF 362

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            +++    L SW  +I G+A  G   EAI  F  L+++G QPD ITF  +L+AC ++GLV+
Sbjct: 363  KETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVD 422

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G  YF S+   Y +  T +HY+C++DLL ++G  DEA + I  M  KPD  +W +LLG 
Sbjct: 423  KGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG 482

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CRIHG+L+ A+ A+  LF++EP N A Y  + N+ A +  W +V ++R +MD+ GV    
Sbjct: 483  CRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKP 542

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SWI I + VHVF      HP + EI   L  L   MK+ G+VPDT  V  D+++E+K 
Sbjct: 543  GLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKE 602

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            + L  H+EKLA+ +G++ T    PI+V KN R C DCHTA K++S +  R+I +RD  RF
Sbjct: 603  QNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRF 662

Query: 1062 HHFREGECSCNDCW 1075
            H F +G CSC D W
Sbjct: 663  HFFEDGHCSCRDYW 676



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 232/502 (46%), Gaps = 45/502 (8%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           ++E I +  +  + + A+++  ++   SA   S     ++Q+C K     +GK++H ++ 
Sbjct: 42  FDEAIHILCQQNRLKEALQILHQIDKPSASVYS----TLIQSCIKSRLLQQGKKVHQHIK 97

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            S     L + N L+ MY++ + L  + ++FD M + +L SWN +IS Y  +G +  A S
Sbjct: 98  LSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKS 157

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAV 542
           LF+KM     + D  +W  ++SG+  H      L L R M+ S   + N  +VS  L A 
Sbjct: 158 LFDKMP----ERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAA 213

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             +  L+ G+E HGYI+R GLD D  V ++L DMY K   ++ A+ +FD M +R+IV W 
Sbjct: 214 AAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWT 273

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQ---- 648
           ++I  Y   G       +   +    I+P+  +++ +++          G  + G     
Sbjct: 274 AMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRV 333

Query: 649 -----SKEALVIIHHMKNSG------------IYPNVVTWTSLISGSLQNENYRESLKFF 691
                S  A  ++H     G              P++ +WTSLI+G  QN    E++++F
Sbjct: 334 GFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYF 393

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSK 750
             + +   +P+  T   +L  C   GL+  G +  H +  + G    A     +ID+ ++
Sbjct: 394 ELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLAR 453

Query: 751 SGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPD-AITFT 808
           SG    A  +  K + K     W  ++ G  I+GN K A      L E   +P+   T+ 
Sbjct: 454 SGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFE--IEPENPATYV 511

Query: 809 ALLAACKNSGLVEEGWKYFDSM 830
            L      +G+  E  K   +M
Sbjct: 512 TLANIYATAGMWSEVAKIRKTM 533



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 194/464 (41%), Gaps = 73/464 (15%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           + + +++ C K      G +VH  +   GF   + +   L+  Y KC  +  + KLF E+
Sbjct: 72  VYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEM 131

Query: 356 SDLE------------------------------DDLLWNEIIMVKLRNEKWENAIKLFR 385
            + +                              D+  W  +I   +R+++   A++LFR
Sbjct: 132 PERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFR 191

Query: 386 EMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            M+ S ++K+   T+   L A A V     GK+IHGY++++ L+S+  V + L  MY + 
Sbjct: 192 MMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKC 251

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +E A  +FD M D ++ +W +MI  Y   G     + LF                   
Sbjct: 252 GSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLF------------------- 292

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
                         LLR     G RPN  + S VL A       + G++ HGY+ R G D
Sbjct: 293 ------------ADLLRS----GIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFD 336

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
              +  ++L+ MY K   + +A+ VF      ++ +W SLI+GY   G    A +    +
Sbjct: 337 PFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELL 396

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNEN 683
            +   +PD +++  ++S  +  G   + L   H +K   G+      +  +I    ++  
Sbjct: 397 VKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQ 456

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTC---GGLGLLQNGKE 724
           + E+     +M    +KP+    +SLL  C   G L L Q   E
Sbjct: 457 FDEAENIISKMS---MKPDKFLWASLLGGCRIHGNLKLAQRAAE 497



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 170/398 (42%), Gaps = 30/398 (7%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           +G E+H  +++ G D D  +  AL + YGKC  +E A  +F ++ D  D + W  +I   
Sbjct: 221 IGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVD-RDIVTWTAMIDRY 279

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            ++ + +    LF ++  S  +    T   +L ACA   +   GK++HGY+ +   +   
Sbjct: 280 FQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFS 339

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
              + L+ MYS+   +  A RVF      +L SW S+I+ Y   G  D A   F  +  S
Sbjct: 340 FAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKS 399

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKY 550
             QPD IT+  +LS     G     L     + +  G        + ++       L + 
Sbjct: 400 GTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDL-----LARS 454

Query: 551 GR--ESHGYILRNGLDYDLYVGTSLMD---MYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
           G+  E+   I +  +  D ++  SL+    ++      Q A E    ++  N   + +L 
Sbjct: 455 GQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLA 514

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEI--KPDLVSWNSLVSGYSIW-------GQSKEALVII 656
           + Y   G++    K+   M++  +  KP L SW ++     ++        +SKE    +
Sbjct: 515 NIYATAGMWSEVAKIRKTMDDRGVVKKPGL-SWIAIKRDVHVFLVGDDSHPKSKEINEFL 573

Query: 657 ----HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
                 MK  G  P+    T+ +   +++E   ++L +
Sbjct: 574 GKLSKRMKEEGFVPD----TNFVLHDVEDEQKEQNLSY 607


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/423 (43%), Positives = 266/423 (62%), Gaps = 6/423 (1%)

Query: 659  MKNSGIY------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
            M N+GI       P+ V WTS+ISG + N N  ++L+ + +M+Q  + P+  T ++L++ 
Sbjct: 81   MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 140

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
               +  L+ G+++H   +K   + D +V T L+DMY+K GN++ A  +F+K   + +A W
Sbjct: 141  SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALW 200

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            N M++G A +GN +EA+ LF  +   G +PD ++F  +L+AC ++GL  E ++Y  SM  
Sbjct: 201  NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 260

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
            DY I P IEHYSC+VD LG+AG + EA   I TMPFK  A+I  ALLG+CRI G +E  +
Sbjct: 261  DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVEXGK 320

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
              + RLF LEP +SA Y L+ N+ A +NRW+DV   R  M    VK    +SWI +  ++
Sbjct: 321  RVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNML 380

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            H+F  +   HP    IY ++  ++  +++ GYVPDT  V  D+++EEK + L  H+EKLA
Sbjct: 381  HLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLA 440

Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
            I YGL+ T +   IRVIKN RVC DCH A KY+S V  REI LRD  RFHHFR+G CSC 
Sbjct: 441  IAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCG 500

Query: 1073 DCW 1075
            D W
Sbjct: 501  DYW 503



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 39/349 (11%)

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           + A++LF  +  S  K+   T+    +AC  +    +GKQIH + +K+  +S+L V + +
Sbjct: 12  KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           + MY +   +  A  VF+ +                                     PD 
Sbjct: 72  LDMYIKCGDMVNAGIVFNYIS-----------------------------------APDD 96

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
           + W  ++SG   +G+    L +   M+     P+  + + +++A + +  L+ GR+ H  
Sbjct: 97  VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHAN 156

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           +++     D +VGTSL+DMY K   +++A  +F  M  RNI  WN+++ G    G    A
Sbjct: 157 VIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEA 216

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLIS 676
             +   M+   I+PD VS+  ++S  S  G + EA   +H M N  GI P +  ++ L+ 
Sbjct: 217 VNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVD 276

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
              +    +E+ K    M     K +++   +LL  C   G ++ GK +
Sbjct: 277 ALGRAGLVQEADKVIETMP---FKASASINRALLGACRIQGDVEXGKRV 322



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 134/280 (47%), Gaps = 2/280 (0%)

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
            G + ++ LE++  +H  G       L    K C  L+    G ++HA  IK GFD D+H
Sbjct: 7   IGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLH 66

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           +   +++ Y KC D+ +A  +F+ +S   DD+ W  +I   + N   + A++++  M+ S
Sbjct: 67  VNSGILDMYIKCGDMVNAGIVFNYIS-APDDVAWTSMISGCVDNGNEDQALRIYHRMRQS 125

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                  T   +++A + V A  +G+Q+H  V+K    S+  V   L+ MY++   +E A
Sbjct: 126 RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDA 185

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            R+F  M   N++ WN+M+      G  + A +LF  M S  I+PD +++  +LS     
Sbjct: 186 YRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHA 245

Query: 511 GSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLK 549
           G        L  M    G  P     S ++ A+    L++
Sbjct: 246 GLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQ 285



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 113/219 (51%), Gaps = 4/219 (1%)

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           ++ G +   + +++L+ F  + +   K +  T+++  + CG L LL  GK+IH   +K G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
           F  D +V +G++DMY K G++ +A  VF   +     +W  MI G    GN  +A+ ++H
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            + ++   PD  TF  L+ A      +E+G + + + +  D    P +   + +VD+  K
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAK 178

Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            G +++A+   + M  + +  +W A+L     HG+ E A
Sbjct: 179 CGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEA 216



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 131/312 (41%), Gaps = 40/312 (12%)

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++ G+      +  L L   +   G + +  +++   +A   L LL  G++ H + ++ G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            D DL+V + ++DMY+K   + NA  VF+ +   + VAW S+ISG    G    A ++ +
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 623 QMEEEEIKPDLVSW-----------------------------------NSLVSGYSIWG 647
           +M +  + PD  ++                                    SLV  Y+  G
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             ++A  +   M       N+  W +++ G  Q+ N  E++  F  M+   I+P+  +  
Sbjct: 181 NIEDAYRLFKKMN----VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFI 236

Query: 708 SLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
            +L  C   GL     E +H +    G   +    + L+D   ++G ++ A +V      
Sbjct: 237 GILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPF 296

Query: 767 KTLASWNCMIMG 778
           K  AS N  ++G
Sbjct: 297 KASASINRALLG 308



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 6/253 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L   K  HA  IK G  ++SD  V S I   Y++ GD  +A   F    +     W+S +
Sbjct: 46  LDQGKQIHAHAIKAG--FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMI 103

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
                 G E Q  L ++  +    V+        ++K  + + A   G ++HA++IK   
Sbjct: 104 SGCVDNGNEDQA-LRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDC 162

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
             D  +  +L++ Y KC ++E A +LF ++ ++ +  LWN +++   ++   E A+ LF+
Sbjct: 163 VSDPFVGTSLVDMYAKCGNIEDAYRLFKKM-NVRNIALWNAMLVGLAQHGNAEEAVNLFK 221

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRN 444
            M+    +    + + +L AC+  G   E  + +H       +E  +   +CL+    R 
Sbjct: 222 SMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA 281

Query: 445 NKLELATRVFDSM 457
             ++ A +V ++M
Sbjct: 282 GLVQEADKVIETM 294


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/569 (34%), Positives = 315/569 (55%), Gaps = 32/569 (5%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            +LQ+  + + L  G++ H      G+ Y+  + T L+ +Y  ++ L NA+ +FD +  +N
Sbjct: 53   LLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQN 112

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
            +  WN LI GY + G   NA  + ++M +  ++PD  +   ++   S      E   I  
Sbjct: 113  LFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHE 172

Query: 658  HMKNSG-------------------------------IYPNVVTWTSLISGSLQNENYRE 686
            ++  SG                               +  + V W S+++   QN +  E
Sbjct: 173  YVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDE 232

Query: 687  SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            S+    +M    ++P   T+ +++ +   +  L  G+EIH    ++GF  +  V T LID
Sbjct: 233  SISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALID 292

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY+K G++K A  +F +   K + SWN +I G+A++G    A+ LF ++ +   +PD IT
Sbjct: 293  MYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHIT 351

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F  +LAAC    L++EG   ++ M  DY I PT++HY+CM+DLLG  G LDEA+D IR M
Sbjct: 352  FVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNM 411

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              KPD+ +WGALL SC+IHG++E AE+A  +L +LEP +S NY ++ N+ A S +WE VE
Sbjct: 412  SVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVE 471

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            +LR  M +  +K  +  SWI++   V+ F A    H  +  IY EL  L   M + GY P
Sbjct: 472  KLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAP 531

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            DT  V+ D++E+EK  ++ SH+E+LAI +GL+ T     + + KN R+C DCH A K++S
Sbjct: 532  DTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFIS 591

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +  REI +RD  R+H F+ G CSC D W
Sbjct: 592  KIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 199/417 (47%), Gaps = 41/417 (9%)

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           T +L+ C    A   G ++HA     G  ++  L   L++ Y     + +A  LF ++  
Sbjct: 51  TSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPK 110

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
            ++  LWN +I     N   +NAI L+ +M     +  + T+  +L+AC+ + A  EG+ 
Sbjct: 111 -QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           IH YV+KS  E +L V   LI MY++   +  A RVFD +   +   WNSM+++Y   G+
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            D + SL                                    R M + G RP  +++  
Sbjct: 230 PDESISL-----------------------------------CREMAANGVRPTEATLVT 254

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           V+ +  ++  L YGRE HG+  R+G   +  V T+L+DMY K   ++ A  +F+ ++ + 
Sbjct: 255 VISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKR 314

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           +V+WN++I+GY   GL V A  + ++M +E+ +PD +++  +++  S      E   + +
Sbjct: 315 VVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYN 373

Query: 658 HM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            M ++ GI P V  +T +I          E+      M    +KP+S    +LL +C
Sbjct: 374 LMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMS---VKPDSGVWGALLNSC 427



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 186/439 (42%), Gaps = 79/439 (17%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ+C    A + GKQ+H       +  N  +   L+ +Y+ +N L  A  +FD +   N
Sbjct: 53  LLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQN 112

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           L                                     WN L+ G+  +G + N + L  
Sbjct: 113 L-----------------------------------FLWNVLIRGYAWNGPHDNAIILYH 137

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M   G RP+  ++  VL+A + L  +  GR  H Y++++G + DL+VG +L+DMY K  
Sbjct: 138 KMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCG 197

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP---DLVS--- 635
           C+ +A  VFD +  R+ V WNS+++ Y   G    +  +  +M    ++P    LV+   
Sbjct: 198 CVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVIS 257

Query: 636 ------------------W-----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                             W            +L+  Y+  G  K AL +   ++      
Sbjct: 258 SSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREK---- 313

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            VV+W ++I+G   +     +L  F +M++ED +P+  T   +L  C    LL  G+ ++
Sbjct: 314 RVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALY 372

Query: 727 CLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGN 784
            L +++ G        T +ID+    G L  A ++ R  S       W  ++    I+GN
Sbjct: 373 NLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432

Query: 785 GKEAILLFHELLETGFQPD 803
            + A L   +L+E   +PD
Sbjct: 433 VELAELALEKLIE--LEPD 449



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 169/362 (46%), Gaps = 18/362 (4%)

Query: 145 IYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKF 204
           I++ F    S   +  +H+  S+ + P     P T         SCI S           
Sbjct: 15  IFNLFPFSQSFYHSLATHQTASVDSFPPQ---PTTHYGYTSLLQSCIDS----------- 60

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           + L+  K  HAQ   +G  +N D +   L+  Y       +A   F     ++   W+  
Sbjct: 61  KALNPGKQLHAQFYHLGIAYNQD-LATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVL 119

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +  Y ++ G     + ++ ++   G+   +  L  +LK C+ L A   G  +H  +IK G
Sbjct: 120 IRGY-AWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSG 178

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           ++ D+ +  AL++ Y KC  V  A ++F ++  + D +LWN ++    +N   + +I L 
Sbjct: 179 WERDLFVGAALIDMYAKCGCVMDAGRVFDKIV-VRDAVLWNSMLAAYAQNGHPDESISLC 237

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           REM  +  +    T+V ++ + A V     G++IHG+  +   +SN  V   LI MY++ 
Sbjct: 238 REMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKC 297

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +++A  +F+ +++  + SWN++I+ Y   G    A  LF+KM     +PD IT+  +L
Sbjct: 298 GSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVL 356

Query: 505 SG 506
           + 
Sbjct: 357 AA 358



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 13/214 (6%)

Query: 681 NENYRESLKFFIQMQQEDIKPNSTT---MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
           ++++  SL        +   P  TT    +SLLQ+C     L  GK++H      G   +
Sbjct: 22  SQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYN 81

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             +AT L+ +Y+ S +L +AR +F K   + L  WN +I G+A  G    AI+L+H++L+
Sbjct: 82  QDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLD 141

Query: 798 TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY----SCMVDLLGKA 853
            G +PD  T   +L AC     + EG         +Y I    E      + ++D+  K 
Sbjct: 142 YGLRPDNFTLPFVLKACSALSAIGEGRSIH-----EYVIKSGWERDLFVGAALIDMYAKC 196

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           G + +A      +  + DA +W ++L +   +GH
Sbjct: 197 GCVMDAGRVFDKIVVR-DAVLWNSMLAAYAQNGH 229


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like
            [Glycine max]
          Length = 694

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/654 (33%), Positives = 352/654 (53%), Gaps = 47/654 (7%)

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            ++S  NS++  Y   G + +A +LF+ M       ++++WN L++G+   G++  VL L 
Sbjct: 49   HISHLNSLVHLYVKCGQLGLARNLFDAMPLR----NVVSWNVLMAGYLHGGNHLEVLVLF 104

Query: 521  RGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
            + M SL    PN    +  L A +    +K G + HG + + GL    YV ++L+ MY +
Sbjct: 105  KNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSR 164

Query: 580  NDCLQNAQEVFDNMKNR---NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
               ++ A +V D +      +I ++NS+++     G    A ++L +M +E +  D V++
Sbjct: 165  CSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTY 224

Query: 637  -----------------------------------NSLVSGYSIWGQSKEALVIIHHMKN 661
                                               + L+  Y   G+   A  +   ++N
Sbjct: 225  VGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQN 284

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 NVV WT+L++  LQN  + ESL  F  M +E   PN  T + LL  C G+  L++
Sbjct: 285  R----NVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRH 340

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            G  +H    K GF     V   LI+MYSKSG++ S+  VF     + + +WN MI G++ 
Sbjct: 341  GDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSH 400

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G GK+A+ +F +++     P+ +TF  +L+A  + GLV+EG+ Y + +  ++ I P +E
Sbjct: 401  HGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLE 460

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+CMV LL +AG LDEA +F++T   K D   W  LL +C +H + +     +  + ++
Sbjct: 461  HYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQM 520

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            +P +   Y L+ N+ A + RW+ V  +R  M E  +K     SW+ I   +HVF +EG+ 
Sbjct: 521  DPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSN 580

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
            HP + +IY ++  L++ +K LGYVP+   V  D+++E+K   L  H+EKLA+ YGLMK  
Sbjct: 581  HPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIP 640

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S APIR+IKN R+C DCHTA K +S V  R I +RD  RFHHFR+G C+C D W
Sbjct: 641  SPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/508 (22%), Positives = 220/508 (43%), Gaps = 43/508 (8%)

Query: 211 KSKHAQMIKMGKIWNSDDM--VKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           K+ HAQ +   +  N   +  + SL+  Y++ G    A   F     R+   W+  +  Y
Sbjct: 32  KAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGY 91

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
              G  ++ L+     +  +       + T  L  C+       G++ H  L K G    
Sbjct: 92  LHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCH 151

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEV--SDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            ++K AL++ Y +C  VE A ++   V    + D   +N ++   + + + E A+++ R 
Sbjct: 152 QYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRR 211

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M          T V ++  CA++     G ++H  +L+  L  +  V + LI MY +  +
Sbjct: 212 MVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGE 271

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +  A  VFD +++ N+  W +++++Y   GY + + +LF  M+                 
Sbjct: 272 VLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDRE--------------- 316

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                               G  PN  + +V+L A   +  L++G   H  + + G    
Sbjct: 317 --------------------GTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNH 356

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           + V  +L++MY K+  + ++  VF +M  R+I+ WN++I GY   GL   A ++   M  
Sbjct: 357 VIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVS 416

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH-MKNSGIYPNVVTWTSLISGSLQNENYR 685
            E  P+ V++  ++S YS  G  KE    ++H M+N  I P +  +T +++   +     
Sbjct: 417 AEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLD 476

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           E+  F   M+   +K +     +LL  C
Sbjct: 477 EAENF---MKTTQVKWDVVAWRTLLNAC 501


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Vitis vinifera]
          Length = 585

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/585 (36%), Positives = 326/585 (55%), Gaps = 32/585 (5%)

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
            M+  G  PN  + S +L A     ++ +G++ H  I ++G D +++VGT+L+DMY K   
Sbjct: 1    MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ-MEEEEIKPDLVSWNSLVS 641
            + +A  VFD M  RN+V+WNS+I G+    L+  A  +    + E+ + P+ VS +S++S
Sbjct: 61   MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 642  GYSIWGQ-----------SKEALVIIHHMKNS-------------GIY-------PNVVT 670
              +  G             K  LV + ++ NS             G+         +VVT
Sbjct: 121  ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W  L+ G +QN+ + E+  +F  M++E I P+  + S++L +   L  L  G  IH   +
Sbjct: 181  WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K G++K+  +   LI MY+K G+L  A +VF    +  + SW  MI  + ++G   + I 
Sbjct: 241  KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            LF  +L  G +P  +TF  +L+AC ++G VEEG  +F+SM   +++ P  EHY+CMVDLL
Sbjct: 301  LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLL 360

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG+LDEA  FI +MP KP  ++WGALLG+CR +G+L+    A+ RLF++EP N  NY 
Sbjct: 361  GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYV 420

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+   S R E+   +R  M   GV+     SWI +  +  VF+A    H ++ EIY 
Sbjct: 421  LLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYK 480

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L   +KK GYV +T  V   ++E E+ + L  H+EKLA+ +GL+     +PIR+ K
Sbjct: 481  MLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKK 540

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R C  CHT  K  S +  REI +RD  RFH F +G CSC D W
Sbjct: 541  NLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 214/468 (45%), Gaps = 48/468 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL      M    G ++H+ + K GFD ++ +  AL++ Y KC D+ SA ++F ++ +  
Sbjct: 16  ILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPE-R 74

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFRE-MQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
           + + WN +I+    N  ++ A+ +F++ ++  +      ++  +L ACA +G  + G+Q+
Sbjct: 75  NLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQV 134

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           HG V+K  L     V N L+ MY +    +   ++F  + D ++ +WN ++     +G+V
Sbjct: 135 HGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLV-----MGFV 189

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                          Q D                ++        M+  G  P+ +S S V
Sbjct: 190 ---------------QND---------------KFEEACNYFWVMRREGILPDEASFSTV 219

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           L +   L  L  G   H  I++ G   ++ +  SL+ MY K   L +A +VF+ +++ N+
Sbjct: 220 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 279

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           ++W ++IS Y   G      ++   M  E I+P  V++  ++S  S  G+ +E L   + 
Sbjct: 280 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 339

Query: 659 MKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
           MK    + P    +  ++   L    + +  K FI+     +KP  +   +LL  C   G
Sbjct: 340 MKKIHDMNPGPEHYACMVD-LLGRAGWLDEAKRFIESMP--MKPTPSVWGALLGACRKYG 396

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATG---LIDMYSKSGNLKSAREVFR 762
            L+ G+E      +  F  + Y       L +M ++SG L+ A EV R
Sbjct: 397 NLKMGRE----AAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRR 440



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 189/472 (40%), Gaps = 94/472 (19%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T   +L A A       G+Q+H  + K   ++N+ V   L+ MY++   +  A RVFD M
Sbjct: 12  TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQM 71

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            + NL SWNSMI  +      D A  +F          D++    ++             
Sbjct: 72  PERNLVSWNSMIVGFFHNNLYDRAVGVFK---------DVLREKTVI------------- 109

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
                       PN  SVS VL A   +  L +GR+ HG +++ GL    YV  SLMDMY
Sbjct: 110 ------------PNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMY 157

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            K        ++F  + +R++V WN L+ G+     F  A      M  E I PD  S++
Sbjct: 158 FKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFS 217

Query: 638 -----------------------------------SLVSGYSIWGQSKEALVIIHHMKNS 662
                                              SL++ Y+  G   +A  +   +++ 
Sbjct: 218 TVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDH 277

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               NV++WT++IS    +    + ++ F  M  E I+P+  T   +L  C   G ++ G
Sbjct: 278 ----NVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG 333

Query: 723 -------KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNC 774
                  K+IH   +  G   + Y    ++D+  ++G L  A+        K T + W  
Sbjct: 334 LAHFNSMKKIH--DMNPG--PEHYAC--MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGA 387

Query: 775 MIMGFAIYGN---GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
           ++     YGN   G+EA     E+    + P    +  L   C  SG +EE 
Sbjct: 388 LLGACRKYGNLKMGREAAERLFEM--EPYNPG--NYVLLANMCTRSGRLEEA 435



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 141/301 (46%), Gaps = 13/301 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED------YESFGGEVQELLEVWGEL 285
           +L+  Y +  D  SA + F     R+   W+S +        Y+   G  +++L      
Sbjct: 50  ALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLR----- 104

Query: 286 HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
             K VI     ++ +L  C  +     G +VH  ++K G     ++  +LM+ Y KCR  
Sbjct: 105 -EKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFF 163

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           +   KLF  V D  D + WN ++M  ++N+K+E A   F  M+         +   +L +
Sbjct: 164 DEGVKLFQCVGD-RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS 222

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            A + A H+G  IH  ++K     N+ +   LI+MY++   L  A +VF+ ++DHN+ SW
Sbjct: 223 SASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISW 282

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            +MIS+Y   G  +    LF  M S  I+P  +T+ C+LS     G  +  L     M+ 
Sbjct: 283 TAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKK 342

Query: 526 L 526
           +
Sbjct: 343 I 343


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/659 (34%), Positives = 349/659 (52%), Gaps = 56/659 (8%)

Query: 425  SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
            S LE++L  C+ L       +++ L   + D+     L  + S  S + GL Y   +  +
Sbjct: 30   SILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKF-STDSPFIGLDY---SLQI 85

Query: 485  FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
            F+++ +S    +   WN ++  +    S +  L L + M      P+  +  +V+QA   
Sbjct: 86   FDRIENS----NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA- 140

Query: 545  LRLLKYG-RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            +RLL++G +E H ++L+ G D D+YV  +L++MY     +++A+++F             
Sbjct: 141  VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLF------------- 187

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY---SIWGQSKEALVIIHHMK 660
                                  +E    D VSWNS+++GY      GQ  EA  + + M 
Sbjct: 188  ----------------------DESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMD 225

Query: 661  NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                  ++V+W++LISG  QN  Y E+L  FI+M    ++ +   + S+L  C  L +++
Sbjct: 226  EK----DMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVK 281

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLI----DMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
             GK IH L ++ G      +   LI    DMY K G +++A EVF     K ++SWN +I
Sbjct: 282  TGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALI 341

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
            +G A+ G  + ++ +F E+   G  P+ ITF  +L AC++ GLV+EG  +F SM   + I
Sbjct: 342  IGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGI 401

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P ++HY CMVDLLG+AG L+EA   I +MP  PD   WGALLG+C+ HG  E  E   R
Sbjct: 402  EPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGR 461

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            +L +L+P +   + L+ N+ A    WEDV  +R  M + GV      S I+ + +VH F 
Sbjct: 462  KLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFL 521

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            A    HP   ++   L  +   +K  GY PDT  V  DIDEEEK   L  H+EKLAI +G
Sbjct: 522  AGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFG 581

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+      PIR++KN R+C+DCHTAAK +S    REI +RD  RFH+F+EG CSC D W
Sbjct: 582  LLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 195/384 (50%), Gaps = 16/384 (4%)

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
           ++F  + +  +  +WN ++   +++   E A+ L++ M  ++    + T   ++QACA  
Sbjct: 84  QIFDRIEN-SNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVR 142

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
                GK+IH +VLK   +S++ V N LI+MY+    +  A ++FD     +  SWNS++
Sbjct: 143 LLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 202

Query: 470 SSYT---GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           + Y     +G V  AW LFN+M+    + D+++W+ L+SG+  +G Y+  L +   M + 
Sbjct: 203 AGYVKKGDMGQVMEAWKLFNEMD----EKDMVSWSALISGYEQNGMYEEALVMFIEMNAN 258

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM----DMYVKNDC 582
           G R +   V  VL A   L ++K G+  HG ++R G++  + +  +L+    DMY+K  C
Sbjct: 259 GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGC 318

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           ++NA EVF+ M+ + + +WN+LI G    GL   +  M ++M+   + P+ +++  ++  
Sbjct: 319 VENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGA 378

Query: 643 YSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
               G   E       M +  GI PNV  +  ++    +     E+ K    M    + P
Sbjct: 379 CRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMP---MAP 435

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEI 725
           +  T  +LL  C   G  + G+ +
Sbjct: 436 DVATWGALLGACKKHGDTEMGERV 459



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 39/246 (15%)

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
           ++++ C   +  + G E+H  ++K GFD DV+++  L+N Y  C ++  A KLF E S +
Sbjct: 134 LVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDE-SPV 192

Query: 359 EDDLLWNEIIMV--------------KLRNEK--------------------WENAIKLF 384
            D + WN I+                KL NE                     +E A+ +F
Sbjct: 193 LDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 252

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS-- 442
            EM  +  +     +V +L ACA +     GK IHG V++  +ES +++ N LI MYS  
Sbjct: 253 IEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDM 312

Query: 443 --RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
             +   +E A  VF+ M++  +SSWN++I      G V+ +  +F++M ++ + P+ IT+
Sbjct: 313 YMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITF 372

Query: 501 NCLLSG 506
             +L  
Sbjct: 373 MGVLGA 378


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/720 (31%), Positives = 370/720 (51%), Gaps = 70/720 (9%)

Query: 390  SSAKAISRTIVKMLQACAKVGAFHEGKQIHG-YVLKSALESNLSVCNCLISMYSRNNKLE 448
            + A A +  +  +LQ+C + G    G+ +H   VL  A  ++  + N LI+MYS    L 
Sbjct: 164  APAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 223

Query: 449  LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
             A R+F +M   N                                    ++W  L+SG  
Sbjct: 224  SALRLFAAMPRRN-----------------------------------AVSWTTLVSGLS 248

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
             +  + + L     M+  G  P   ++S   +A   L      R         G D +L+
Sbjct: 249  QNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELF 307

Query: 569  VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            V ++L DMY K   L  A  VFD M  ++ VAW ++I GY   G    A      M+ E 
Sbjct: 308  VASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG 367

Query: 629  -IKPDLVSWNSLVS---------------------GYSIWGQSKEALVIIHHMKNS---- 662
             +  D   + S++S                     G+ +    + AL+ ++         
Sbjct: 368  LVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESA 427

Query: 663  ----GIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                 I P   NVV+ TS+I G ++ +   E+L  +++++++ ++PN  T SS+++ C  
Sbjct: 428  SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAM 487

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
              LL+ G ++H   +K   I+D++V + L+DMY K G +  + ++F +   +T  +WN +
Sbjct: 488  QALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAV 547

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I  FA +G+G+EAI  F  ++ +G +P+ I F +LL AC ++GLV+EG KYF SM   + 
Sbjct: 548  INVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHG 607

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P  EHYSC++D  G+AG LDEA+ FI  MP KP+A  W +LLG+CR+ G  E  E+A+
Sbjct: 608  IEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAA 667

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            + L KLEP N+  +  +  + A   +WEDV+ +R  M +  +K +  +SW+  ++  HVF
Sbjct: 668  QNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVF 727

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             +E   HP   +IY +L  L + +K+ GY+PDT  +  ++++  K ++L  H+E++A+ +
Sbjct: 728  GSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAF 787

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             L+   +  PI V KN R+C DCHTA K++  V  R+I +RD +RFHHF  G CSC D W
Sbjct: 788  ALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 227/549 (41%), Gaps = 57/549 (10%)

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHG-YVLKSALESNLSVCNCLISMYSRNNKLE 448
           + A A +  +  +LQ+C + G    G+ +H   VL  A  ++  + N LI+MYS    L 
Sbjct: 14  APAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 73

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW-----NCL 503
            A R+F +M   N  SW +++S  +       A + F  M  + + P  + +     N L
Sbjct: 74  SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTL 133

Query: 504 LSGHFTHGSYQN---VLTLLRGMQSLGFRPNGSSVSVV-----LQAVTELRLLKYGRESH 555
              H    S+ +    L +    Q L   P  ++ + V     LQ+      L+ GR  H
Sbjct: 134 GPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLH 193

Query: 556 GYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
             ++ +G      ++   L+ MY     L +A  +F  M  RN V+W +L+SG     + 
Sbjct: 194 ARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMH 253

Query: 615 VNAKKMLNQMEEEEIKP----------------------------------DLVSWNSLV 640
            +A      M    + P                                  +L   ++L 
Sbjct: 254 ADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLA 313

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED-I 699
             YS  G   EA  +   M       + V WT++I G  +N +   ++  F  M++E  +
Sbjct: 314 DMYSKCGLLSEACRVFDQMPQK----DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLV 369

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
             +     S+L   GGL      K IHC   K GF  +  V   LIDMY+KS +++SA  
Sbjct: 370 GADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASR 429

Query: 760 VFR-KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
           V +       + S   MI G+      +EA++++ EL   G +P+  TF++++  C    
Sbjct: 430 VLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQA 489

Query: 819 LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
           L+E+G +   +     ++I      S +VD+ GK G +  +      + ++ D   W A+
Sbjct: 490 LLEQGAQ-LHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAV 547

Query: 879 LGSCRIHGH 887
           +     HGH
Sbjct: 548 INVFAQHGH 556



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 137/608 (22%), Positives = 247/608 (40%), Gaps = 64/608 (10%)

Query: 177 PPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH 236
           PP    A    L+ +        +  + R L      HA+++  G    S  +   LI  
Sbjct: 162 PPAPAAATTVHLASLLQSCGRAGDLRRGRLL------HARLVLSGAAAASTFLANHLITM 215

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG----KGVIF 292
           Y    D  SA + F     R+   W++ +       G  Q L+            +  + 
Sbjct: 216 YSHCADLASALRLFAAMPRRNAVSWTTLVS------GLSQNLMHADALAAFAAMRRAGVA 269

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
            +R            +   L      +    GFD ++ +   L + Y KC  +  A ++F
Sbjct: 270 PTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMYSKCGLLSEACRVF 329

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS-AKAISRTIVKMLQACAKVGA 411
            ++   +D + W  +I    +N   E A+  FR+M+      A       +L A   +  
Sbjct: 330 DQMPQ-KDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKD 388

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD-SMKDHNLSSWNSMIS 470
               K IH  V K+  E  ++V N LI MY+++  +E A+RV        N+ S  SMI 
Sbjct: 389 GWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMID 448

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y     V+ A  ++ ++    ++P+  T++ ++ G                        
Sbjct: 449 GYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKG------------------------ 484

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
                   +QA     LL+ G + H  +++  L  D +VG++L+DMY K   +  + ++F
Sbjct: 485 ------CAMQA-----LLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLF 533

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
           + ++ R  +AWN++I+ +   G    A +  ++M    I+P+ +++ SL++  S  G   
Sbjct: 534 NEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVD 593

Query: 651 EALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
           E L   + MK + GI P    ++ +I    +     E+ KF  +M    IKPN+    SL
Sbjct: 594 EGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP---IKPNAYGWCSL 650

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSAN 766
           L  C   G  + G E+    L      +  +   L  +Y+  G   ++K+ R++ R S  
Sbjct: 651 LGACRMRGSKELG-EVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRI 709

Query: 767 KTLA--SW 772
           K L   SW
Sbjct: 710 KKLPGFSW 717


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like
            [Cucumis sativus]
          Length = 650

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/670 (32%), Positives = 355/670 (52%), Gaps = 80/670 (11%)

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL--ELATRVFDSMKDHNLSSWNSMI 469
            F + KQ+H +++++ L     V   LI M ++ +         VF  +   N   W +MI
Sbjct: 55   FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMI 114

Query: 470  SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
              Y   G +  + + + +M    + P   T++ L                        F+
Sbjct: 115  RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSAL------------------------FK 150

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGY-ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
              G+++++ L           G++ H   IL  G   DLYVG S++D+YVK         
Sbjct: 151  ACGAALNMDL-----------GKQVHAQTILIGGFASDLYVGNSMIDLYVK--------- 190

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
                                C  G    A+K+ ++M E     D+VSW  L+  Y+ +G 
Sbjct: 191  --------------------C--GFLGCARKVFDEMSER----DVVSWTELIVAYAKYGD 224

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             + A  +   + +     ++V WT++++G  QN   +E+L++F +MQ   ++ +  T++ 
Sbjct: 225  MESASGLFDDLPSK----DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 280

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG--LIDMYSKSGNLKSAREVFRKSAN 766
            ++  C  LG +++   I  +  ++GF     V  G  LIDMYSK G+   A +VF     
Sbjct: 281  VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE 340

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            + + S++ MI+G+A++G    A+ LFH++L+T  +P+ +TF  +L+AC ++GLVE+G + 
Sbjct: 341  RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 400

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F  M   + + P+ +HY+CMVDLLG+AG L+EA D ++TMP +P+  +WGALLG+CRIHG
Sbjct: 401  FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            + + A+IA+  LFKLEP    NY L+ N+ A + RWE+V +LR  + E G K     SW 
Sbjct: 461  NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 520

Query: 947  Q-IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            +  +  +H F A    HP + EI   L  L+  ++  GY P+      D+ ++EK ++L+
Sbjct: 521  EGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILM 580

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
            SH+EKLA+ YGL+ T++   I+++KN R+C DCH      S + GREI +RD  RFHHF 
Sbjct: 581  SHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFH 640

Query: 1066 EGECSCNDCW 1075
             G CSC + W
Sbjct: 641  NGTCSCGNFW 650



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 39/335 (11%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSS 263
            S +K  HA +I+ G    S  + K  +   L   D    +    ++   +Y +   W++
Sbjct: 55  FSQIKQVHAHIIRNGLSQCSYVLTK--LIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTA 112

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA-SLIK 322
            +  Y +  G + E    +  +   GV   S   + + K C   +   LG +VHA +++ 
Sbjct: 113 MIRGY-ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILI 171

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS------------------DLE----- 359
            GF  D+++  ++++ Y KC  +  A K+F E+S                  D+E     
Sbjct: 172 GGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGL 231

Query: 360 -DDL------LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            DDL       W  ++    +N + + A++ F++MQ    +    T+  ++ ACA++GA 
Sbjct: 232 FDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV 291

Query: 413 HEGKQIHGYVLKSAL--ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
                I     +S      N+ V + LI MYS+    + A +VF+ MK+ N+ S++SMI 
Sbjct: 292 KHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMIL 351

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            Y   G    A  LF+ M  + I+P+ +T+  +LS
Sbjct: 352 GYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 141/309 (45%), Gaps = 19/309 (6%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y ++GD  SA+  F    S+    W++ +  Y    G  +E LE + ++   G+  
Sbjct: 215 LIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQ-NGRPKEALEYFQKMQDVGMET 273

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKR-------GFDFDVHLKCALMNFYGKCRDV 345
               L  ++  C +L     G   HA+ I+        G   +V +  AL++ Y KC   
Sbjct: 274 DEVTLAGVISACAQL-----GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSP 328

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           + A K+F EV    +   ++ +I+    + +  +A++LF +M  +  +    T + +L A
Sbjct: 329 DEAYKVF-EVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSA 387

Query: 406 CAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLS 463
           C+  G   +G+Q+   + K   +  +     C++ +  R   LE A  +  +M  + N  
Sbjct: 388 CSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGG 447

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRG 522
            W +++ +    G  D+A    N++   +++P+ I    LLS  + + G ++ V  L + 
Sbjct: 448 VWGALLGACRIHGNPDIAQIAANEL--FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKV 505

Query: 523 MQSLGFRPN 531
           ++  GF+ N
Sbjct: 506 IREKGFKKN 514


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 684

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/647 (32%), Positives = 340/647 (52%), Gaps = 45/647 (6%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            N +I+ Y+ L + + A  L  ++  +R   ++++W  L+SG   +G +   L     M+ 
Sbjct: 46   NYLINMYSKLDHPESA-RLVLRLTPAR---NVVSWTSLVSGLAQNGHFSTALFEFFEMRR 101

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
             G  PN  +   V +AV  LRL   G++ H   ++ G   D++VG S  DMY K     +
Sbjct: 102  EGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 586  AQEVFDNMKNRNIVAWNSLIS-------------------------------GY---CFK 611
            A+++FD +  RN+  WN+ IS                               G+   C  
Sbjct: 162  ARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD 221

Query: 612  GLFVN-AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
            GL ++   +M   +       D+  +N L+  Y    Q + + +I   M       N V+
Sbjct: 222  GLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMG----MKNAVS 277

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W SL++  +QN    ++   +++ ++E ++ +   +SS+L  C G+  L+ G+ IH   +
Sbjct: 278  WCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K    ++ +V + L+DMY K G ++ + + F +   K L + N +I G+A  G    A+ 
Sbjct: 338  KACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALA 397

Query: 791  LFHELLETGF--QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            LF ++   G    P+ +TF +LL+AC  +G VE G K FDSM + Y I P  EHYSC+VD
Sbjct: 398  LFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVD 457

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            +LG+AG +++A++FI+ MP KP  ++WGAL  +CR+HG      +A+  LFKL+P +S N
Sbjct: 458  MLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGN 517

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            + L+ N  A + RW +   +R  M  VG+K    +SWI +   VH F A+   H    EI
Sbjct: 518  HVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEI 577

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
               L  L ++M+  GY PD +    D++EEEK   +  H+EKLA+ +GL+      PIR+
Sbjct: 578  QTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRI 637

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             KN R+C DCH+  K++S    REI +RD  RFH F++G CSC D W
Sbjct: 638  TKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 214/503 (42%), Gaps = 43/503 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA+++K         +   LI  Y +     SA     L  +R+   W+S +      G 
Sbjct: 29  HARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGH 88

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
               L E + E+  +GV         + K    L     G ++HA  +K G   DV + C
Sbjct: 89  FSTALFEFF-EMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +  + Y K R  + A KLF E+ +   +  WN  I   + + + + AI+ F E +    +
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLE-TWNAYISNSVTDGRPKEAIEAFIEFRRIGGQ 206

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             S T    L AC+       G Q+HG V +S  ++++SV N LI  Y +  ++  +  +
Sbjct: 207 PNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEII 266

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F  M   N  SW S++++Y                                     H   
Sbjct: 267 FAEMGMKNAVSWCSLVAAYVQ----------------------------------NHEDE 292

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
           +  +  LR  + +    +   +S VL A   +  L+ GR  H + ++  ++ +++VG++L
Sbjct: 293 KASVLYLRSRKEI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSAL 351

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI--KP 631
           +DMY K  C++++++ FD M  +N+V  NSLI GY  +G    A  +   M        P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAP 411

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKF 690
           + +++ SL+S  S  G  +  + I   MK++ GI P    ++ ++    +     ++ +F
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEF 471

Query: 691 FIQMQQEDIKPNSTTMSSLLQTC 713
             +M    IKP  +   +L   C
Sbjct: 472 IKKMP---IKPTISVWGALQNAC 491



 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 162/349 (46%), Gaps = 8/349 (2%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
           C        R   + K  HA  +K G+I   D  V    F  Y +      A K F    
Sbjct: 113 CVFKAVASLRLPVTGKQIHALAVKCGRIL--DVFVGCSAFDMYCKTRLRDDARKLFDEIP 170

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            R+   W++++ +  +  G  +E +E + E    G    S      L  C+  +   LG+
Sbjct: 171 ERNLETWNAYISNSVT-DGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGM 229

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H  + + GFD DV +   L++FYGKC+ + S+  +F+E+  +++ + W  ++   ++N
Sbjct: 230 QMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMG-MKNAVSWCSLVAAYVQN 288

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + E A  L+   +    +     I  +L ACA +     G+ IH + +K+ +E N+ V 
Sbjct: 289 HEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVG 348

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM--NSSR 492
           + L+ MY +   +E + + FD M + NL + NS+I  Y   G VD+A +LF  M      
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCG 408

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQ 540
             P+ +T+  LLS     G+ +N + +   M+S  G  P     S ++ 
Sbjct: 409 PAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVD 457



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 120/537 (22%), Positives = 208/537 (38%), Gaps = 72/537 (13%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKR-GFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           L ++LK      +  LG  VHA ++K         L   L+N Y K    ESA +L   +
Sbjct: 9   LGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA-RLVLRL 67

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
           +   + + W  ++    +N  +  A+  F EM+         T   + +A A +     G
Sbjct: 68  TPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTG 127

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           KQIH   +K     ++ V      MY +    + A ++FD + + NL +WN+ IS+    
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSV-- 185

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                                            T G  +  +      + +G +PN  + 
Sbjct: 186 ---------------------------------TDGRPKEAIEAFIEFRRIGGQPNSITF 212

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              L A ++  LL  G + HG + R+G D D+ V   L+D Y K   +++++ +F  M  
Sbjct: 213 CGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGM 272

Query: 596 RNIVAWNSLISGYC-------FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---GYSI 645
           +N V+W SL++ Y           L++ ++K + +  +  I   L +   +     G SI
Sbjct: 273 KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSI 332

Query: 646 WGQSKEALVIIHHMKNSGIY---------------------PNVVTWTSLISGSLQNENY 684
              + +A V  +    S +                       N+VT  SLI G       
Sbjct: 333 HAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQV 392

Query: 685 RESLKFFIQMQQEDI--KPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVA 741
             +L  F  M        PN  T  SLL  C   G ++NG +I   +    G    A   
Sbjct: 393 DMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHY 452

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           + ++DM  ++G ++ A E  +K   K T++ W  +     ++G     IL    L +
Sbjct: 453 SCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFK 509



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
           ++A  LI+MYSK  + +SAR V R +  + + SW  ++ G A  G+   A+  F E+   
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRRE 102

Query: 799 GFQPDAITFTALLAA 813
           G  P+  TF  +  A
Sbjct: 103 GVAPNDFTFPCVFKA 117


>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 649

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/602 (35%), Positives = 325/602 (53%), Gaps = 47/602 (7%)

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            L Y  + +  F++       PD   WN ++ G       +  L L + M       N  +
Sbjct: 94   LPYAQIVFDGFDR-------PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYT 146

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
               +L+A + L  L+   + H  I + G + D+Y                          
Sbjct: 147  FPSLLKACSNLSALEETTQIHAQITKLGYENDVY-------------------------- 180

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                 A NSLI+ Y   G F  A  + +++     KPD VSWNS++ GY+  G+   AL 
Sbjct: 181  -----AVNSLINSYAATGNFKLAHLLFDRIP----KPDAVSWNSVIKGYAKAGKMDIALT 231

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            +   M    +  N ++WT++ISG +Q   ++E+L+ F +MQ  D++P++ ++++ L  C 
Sbjct: 232  LFRKM----VEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACA 287

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             LG L+ GK IH    K     D+ +   LIDMY+K G++  A EVF+    K++ +W  
Sbjct: 288  QLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTA 347

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            +I G+A +G+G+EAI  F E+ + G +P+ ITFT +L AC  +GLVEEG   F +M  DY
Sbjct: 348  LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDY 407

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
            N+ PTIEHY C+VDLL +AG LDEA  FI+ MP KP+A IWGALL +CRIH ++E  E  
Sbjct: 408  NLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 467

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
               L  ++P +   Y    N+ AM  +W+     R  M E GV  V   S I ++   H 
Sbjct: 468  GEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 527

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL-SHTEKLAI 1013
            F A    HP   +I  +   +  ++++ GYVP+   +  D+ ++++ + ++  H+EKLAI
Sbjct: 528  FLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAI 587

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             YGL+KTK    IR++KN RVC DCH   K +S +  R+I +RD  RFHHFR+G+CSC D
Sbjct: 588  TYGLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGD 647

Query: 1074 CW 1075
             W
Sbjct: 648  YW 649



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 216/417 (51%), Gaps = 16/417 (3%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL-FSEVS----DLEDDLLWNEIIM 369
           ++HA ++K G   D +   A+  F   C    S++ L ++++     D  D  LWN +I 
Sbjct: 61  QIHARMLKTGLIQDSY---AITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 117

Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
               +++ E ++ L++ M   SA   + T   +L+AC+ + A  E  QIH  + K   E+
Sbjct: 118 GFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEN 177

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           ++   N LI+ Y+     +LA  +FD +   +  SWNS+I  Y   G +D+A +LF KM 
Sbjct: 178 DVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKM- 236

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
              ++ + I+W  ++SG+   G ++  L L   MQ+    P+  S++  L A  +L  L+
Sbjct: 237 ---VEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 293

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G+  H Y+ +  +  D  +G  L+DMY K   +  A EVF N++ +++ AW +LISGY 
Sbjct: 294 QGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYA 353

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNV 668
           + G    A     +M++  IKP+++++ ++++  S  G  +E  +I ++M ++  + P +
Sbjct: 354 YHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTI 413

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             +  ++   L      +  K FI  Q+  +KPN+    +LL+ C     ++ G+EI
Sbjct: 414 EHYGCVVD-LLSRAGLLDEAKRFI--QEMPLKPNAVIWGALLKACRIHKNIELGEEI 467



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 165/371 (44%), Gaps = 40/371 (10%)

Query: 173 SLALPPTDTLAKQAQLSCISSGFCFLNETN-KFRC--LSSVKSKHAQMIKMGKIWNSDDM 229
           SL   P      Q  +  + SG C+    N + RC     +K  HA+M+K G I +S  +
Sbjct: 19  SLTTLPHRWFCAQISVGPLLSGSCYCMMPNTETRCSKQEELKQIHARMLKTGLIQDSYAI 78

Query: 230 VKSLIFHYLEFG-DFTSAAKAFFLYFSRSYAD-WSSFLEDYESFGGEVQELLEVWGELHG 287
            K L         DF   A+  F  F R     W+  +  + S   E +  L ++  +  
Sbjct: 79  TKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF-SCSDEPERSLLLYQRMLC 137

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
                 +     +LK C+ L A     ++HA + K G++ DV+   +L+N Y    + + 
Sbjct: 138 CSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKL 197

Query: 348 ANKLFSEVSDLEDDLLWNEII------------------MVKLRNEKW------------ 377
           A+ LF  +    D + WN +I                  MV+     W            
Sbjct: 198 AHLLFDRIPK-PDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGM 256

Query: 378 -ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            + A++LF EMQ S  +  + ++   L ACA++GA  +GK IH Y+ K+ +  + SV  C
Sbjct: 257 HKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMD-SVLGC 315

Query: 437 -LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            LI MY++   +  A  VF +++  ++ +W ++IS Y   G+   A S F +M    I+P
Sbjct: 316 VLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 375

Query: 496 DIITWNCLLSG 506
           ++IT+  +L+ 
Sbjct: 376 NVITFTTVLTA 386



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 99/246 (40%), Gaps = 12/246 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S+I  Y + G    A   F     ++   W++ +  Y   G   +E L+++ E+    V 
Sbjct: 215 SVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMH-KEALQLFHEMQNSDVE 273

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             +  L   L  C +L A   G  +H+ L K     D  L C L++ Y KC D+  A ++
Sbjct: 274 PDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEV 333

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +   +    W  +I     +     AI  F EMQ    K    T   +L AC+  G 
Sbjct: 334 FKNIQR-KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGL 392

Query: 412 FHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSW 465
             EGK I       Y LK  +E       C++ + SR   L+ A R    M    N   W
Sbjct: 393 VEEGKLIFYNMERDYNLKPTIEHY----GCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIW 448

Query: 466 NSMISS 471
            +++ +
Sbjct: 449 GALLKA 454


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/612 (33%), Positives = 327/612 (53%), Gaps = 36/612 (5%)

Query: 497  IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            ++TW  L+SG   +G + + L     M+    +PN  +     +A T L L   G++ H 
Sbjct: 23   VVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHA 82

Query: 557  YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
              L+ G   D +VG S  DMY K      AQ +FD M  RN+  WN+ IS     G    
Sbjct: 83   IALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGK 142

Query: 617  AKKMLNQMEEEEIKPDLVSWNSLV---------------------SGY-----------S 644
            A     +      +PDL+++ + +                     SG+            
Sbjct: 143  AIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIID 202

Query: 645  IWGQSKEALVIIHHMKNSGI-YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
            ++G+ KE  V +  M  +G+   N V+W ++++   QN+   ++   F+  ++E I+   
Sbjct: 203  VYGKCKE--VELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTD 260

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
              +SS++    G+  L+ G+ +H L +K     D +V + L+DMY K G+++   +VF +
Sbjct: 261  YMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHE 320

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               + L SWN MI G+A  G+   A+ LF E+ ++    + +T   +L+AC   G V+ G
Sbjct: 321  MPERNLVSWNAMISGYAHQGDVDMAMTLFEEM-QSEAVANYVTLICVLSACSRGGAVKLG 379

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
             + F+SM   Y I P  EHY+C+ D+LG+AG ++ A++F++ MP +P  ++WGALL +CR
Sbjct: 380  NEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACR 439

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            ++G  E  +IA+  LFKL+P +S N+ L+ N+ A + RW++   +R  M +VG+K     
Sbjct: 440  VYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGC 499

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            SW+     VHVF A+   H    EI   L  L +EM+  GY+PDT     D++EEEK   
Sbjct: 500  SWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTE 559

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            +  H+EK+A+ +GL+      PIR+ KN R+C DCH+A K++S + GREI +RD  RFH 
Sbjct: 560  VGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHR 619

Query: 1064 FREGECSCNDCW 1075
            FR+ +CSC D W
Sbjct: 620  FRDSQCSCRDFW 631



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 187/424 (44%), Gaps = 41/424 (9%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
            K  T L   + G ++HA  +K G   D  + C+  + Y K      A +LF E+    +
Sbjct: 65  FKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPP-RN 123

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
             +WN  I   + + +   AI  F E +    +    T    L ACA       G+Q+HG
Sbjct: 124 VAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHG 183

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
            V++S  E ++SV N +I +Y +  ++ELA  VF+ M   N  SW +M+++         
Sbjct: 184 LVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACE------- 236

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
                        Q D     C++   F  G  +            G       VS V+ 
Sbjct: 237 -------------QNDEKEKACVV---FLMGRKE------------GIELTDYMVSSVIS 268

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
           A   +  L++GR  H   ++  ++ D++VG++L+DMY K   +++ ++VF  M  RN+V+
Sbjct: 269 AYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVS 328

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           WN++ISGY  +G    A  +  +M+ E +  + V+   ++S  S  G  K    I   M+
Sbjct: 329 WNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVLSACSRGGAVKLGNEIFESMR 387

Query: 661 NS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
           +   I P    + + I+  L      E    F+  Q+  I+P  +   +LL  C   G  
Sbjct: 388 DRYRIEPGAEHY-ACIADMLGRAGMVERAYEFV--QKMPIRPTISVWGALLNACRVYGEP 444

Query: 720 QNGK 723
           + GK
Sbjct: 445 ELGK 448



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 145/305 (47%), Gaps = 6/305 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  HA  +K+G+I  +D  V    F  Y + G    A + F     R+ A W++++ +  
Sbjct: 78  KQIHAIALKLGQI--NDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISN-A 134

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G   + ++ + E    G           L  C       LG ++H  +I+ GF+ DV
Sbjct: 135 VLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDV 194

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +   +++ YGKC++VE A  +F+ +    + + W  ++    +N++ E A  +F   + 
Sbjct: 195 SVANGIIDVYGKCKEVELAEMVFNGMGR-RNSVSWCTMVAACEQNDEKEKACVVFLMGRK 253

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              +     +  ++ A A +     G+ +H   +K+ +E ++ V + L+ MY +   +E 
Sbjct: 254 EGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIED 313

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
             +VF  M + NL SWN+MIS Y   G VD+A +LF +M S  +  + +T  C+LS    
Sbjct: 314 CEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVLSACSR 372

Query: 510 HGSYQ 514
            G+ +
Sbjct: 373 GGAVK 377



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 104/483 (21%), Positives = 194/483 (40%), Gaps = 89/483 (18%)

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
           D+ +  +L  +++     + W  +I   ++N  + +A+  F +M+  + K    T     
Sbjct: 6   DLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAF 65

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +A   +     GKQIH   LK    ++  V      MYS+      A R+FD M   N++
Sbjct: 66  KASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVA 125

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
            WN+ IS+    G    A   F +      +PD+IT+                       
Sbjct: 126 VWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITF----------------------- 162

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                          L A  + R L  GR+ HG ++R+G + D+ V   ++D+Y K   +
Sbjct: 163 ------------CAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEV 210

Query: 584 QNAQEVFDNMKNRNIVAWNSLISG---------YCFKGLF----------------VNAK 618
           + A+ VF+ M  RN V+W ++++           C   L                 ++A 
Sbjct: 211 ELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAY 270

Query: 619 KMLNQME----------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
             ++ +E          +  ++ D+   ++LV  Y   G  ++   + H M       N+
Sbjct: 271 AGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPER----NL 326

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           V+W ++ISG     +   ++  F +MQ E +  N  T+  +L  C   G ++ G EI   
Sbjct: 327 VSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVLSACSRGGAVKLGNEIF-- 383

Query: 729 CLKNGFIKDAY-VATG------LIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFA 780
                 ++D Y +  G      + DM  ++G ++ A E  +K     T++ W  ++    
Sbjct: 384 ----ESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACR 439

Query: 781 IYG 783
           +YG
Sbjct: 440 VYG 442


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/572 (35%), Positives = 324/572 (56%), Gaps = 37/572 (6%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDNMK 594
            +LQ   + R L  G+  HG  +  GL  D      L+++Y K   NDC   A+ VFD M 
Sbjct: 62   LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDC---ARRVFDAMS 118

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV----SGYSIWGQSK 650
             R+I++WN++I+GY      V A K+ ++M  E  +    + +S +    + Y+I    +
Sbjct: 119  VRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQ 178

Query: 651  EALVIIHHMKNSG----------------------IYPNV-----VTWTSLISGSLQNEN 683
               + I    +S                       ++ N+     VTW+SL +G +QN  
Sbjct: 179  LHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGL 238

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
            + E L  F   Q+E ++    T+SS+L TC  L L+  G ++H + +K+GF ++ +VAT 
Sbjct: 239  HEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATS 298

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            L+D+Y+K G ++ + EVF     K +  WN MI  F+ + +  EA++LF ++ + G  P+
Sbjct: 299  LVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPN 358

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             +T+ ++L+AC ++GLVEEG  YF+ + +D    P + HYSCMVD+LG++G  DEAW  +
Sbjct: 359  EVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLL 418

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              MPF+P A++WG+LLGS RIH ++  A IA+ +LF+LEP N  N+ L+ N+ A S  WE
Sbjct: 419  DKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWE 478

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            +V   R  + + G K  +  SWI+    +HVF A    HP   ++Y +L  +  EM+K+ 
Sbjct: 479  NVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKIS 538

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            +  +T+C   D+  ++K ++L  H+EKLA  +GL+      PI + KN R+C DCH+  K
Sbjct: 539  HRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHSFMK 598

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +S +  R++ +RD  RFHHF++G CSC D W
Sbjct: 599  IVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 188/415 (45%), Gaps = 46/415 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+LC K  +  +G   H   I  G   D      L+N Y KC   + A ++F  +S + 
Sbjct: 62  LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMS-VR 120

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
             + WN +I     N +   A+KLF  M     +    T+   L ACA   A  E KQ+H
Sbjct: 121 SIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLH 180

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              +K AL+S+  V    + +Y++ N ++ A  VF++M                      
Sbjct: 181 TIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP--------------------- 219

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                         +   +TW+ L +G   +G ++ VL L +  Q  G +    +VS +L
Sbjct: 220 --------------EKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSIL 265

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
                L L+  G + H  I+++G   +L+V TSL+D+Y K   ++ + EVF +M+ +N+V
Sbjct: 266 STCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVV 325

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH- 658
            WN++I+ +        A  +  +M++  I P+ V++ S++S  S  G  +E     H+ 
Sbjct: 326 LWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGR---HYF 382

Query: 659 ---MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
              + +    PNV+ ++ ++    ++    E+ K   +M  E   P ++   SLL
Sbjct: 383 NLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFE---PTASMWGSLL 434



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 191/443 (43%), Gaps = 78/443 (17%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T+ ++LQ CAK  +   GK  HG  +   L ++   CN LI++Y++  + + A RVFD+M
Sbjct: 58  TLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAM 117

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              ++ SWN+MI+ YT       A  LF++M+                            
Sbjct: 118 SVRSIISWNTMIAGYTHNREDVEALKLFSRMHR--------------------------- 150

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
               G Q   F     ++S  L A      +   ++ H   ++  LD   +VGT+ +D+Y
Sbjct: 151 ---EGTQMTEF-----TLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVY 202

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAKKMLNQMEEEEIK 630
            K + +++A  VF+NM  +  V W+SL +G+   G       LF + ++   Q+ E  + 
Sbjct: 203 AKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVS 262

Query: 631 P----------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                                        +L    SLV  Y+  GQ +++  +   M+  
Sbjct: 263 SILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEK 322

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               NVV W ++I+   ++ +  E++  F +MQQ  I PN  T  S+L  C   GL++ G
Sbjct: 323 ----NVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEG 378

Query: 723 KEIHCLCLKNGFIKDAYVA-TGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFA 780
           +    L L +   +   +  + ++D+  +SG    A ++  K   +  AS W  ++    
Sbjct: 379 RHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSR 438

Query: 781 IYGNGKEAILLFHELLETGFQPD 803
           I+ N + A +   +L     +P+
Sbjct: 439 IHKNIRLARIAAEQLFR--LEPE 459



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 139/305 (45%), Gaps = 5/305 (1%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADW 261
           K R L   KS H   I  G +  +D +  +++ + Y + G    A + F     RS   W
Sbjct: 68  KRRSLLVGKSCHGLAIHFGLV--TDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISW 125

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           ++ +  Y +   E  E L+++  +H +G       L+  L  C    A     ++H   I
Sbjct: 126 NTMIAGY-THNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAI 184

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           K   D    +  A ++ Y KC  ++ A  +F  + + +  + W+ +    ++N   E  +
Sbjct: 185 KLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPE-KTSVTWSSLFAGFVQNGLHEEVL 243

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            LF+  Q    +    T+  +L  CA +    EG Q+H  ++K     NL V   L+ +Y
Sbjct: 244 CLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVY 303

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           ++  ++E +  VF  M++ N+  WN+MI+S++   +   A  LF KM    I P+ +T+ 
Sbjct: 304 AKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYL 363

Query: 502 CLLSG 506
            +LS 
Sbjct: 364 SILSA 368



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 132/275 (48%), Gaps = 7/275 (2%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           ++   WSS    +    G  +E+L ++     +G+      ++ IL  C  L     G +
Sbjct: 221 KTSVTWSSLFAGFVQ-NGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQ 279

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           VHA ++K GF  ++ +  +L++ Y KC  +E + ++F+++ + ++ +LWN +I    R+ 
Sbjct: 280 VHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEE-KNVVLWNAMIASFSRHA 338

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVC 434
               A+ LF +MQ         T + +L AC+  G   EG+     +L     E N+   
Sbjct: 339 HSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHY 398

Query: 435 NCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
           +C++ +  R+ K + A ++ D M  +   S W S++ S      + +A     ++   R+
Sbjct: 399 SCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQL--FRL 456

Query: 494 QPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLG 527
           +P+    + LLS  +   G+++NV+   + ++  G
Sbjct: 457 EPENGGNHVLLSNVYAASGNWENVVVARKYLRDSG 491



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 2/176 (1%)

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T+  LLQ C     L  GK  H L +  G + D      LI++Y+K G    AR VF   
Sbjct: 58  TLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAM 117

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
           + +++ SWN MI G+       EA+ LF  +   G Q    T ++ L AC     + E  
Sbjct: 118 SVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC- 176

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           K   +++    +  +    +  +D+  K   + +A      MP K   T W +L  
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVT-WSSLFA 231


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 944

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/762 (29%), Positives = 386/762 (50%), Gaps = 78/762 (10%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            +++ Y K  D+ SA  LF  + D    + W  ++     N  ++ A KLFR+M  S    
Sbjct: 81   MISGYVKMGDLSSARHLFDAMPD-RTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLP 139

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL--SVCNCLISMYSRNNKLELATR 452
               T   +L  C      +   Q+H + +K   ++NL  +VCN L+  Y    +L     
Sbjct: 140  DYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRL----- 194

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
                                      D+A  LF ++    +  D +T+N L++G+   G 
Sbjct: 195  --------------------------DLACVLFEEI----LDKDSVTFNTLITGYEKDGL 224

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            Y   + L   M+  G +P+  + S VL+AV  L     G++ HG  +  G   D  VG  
Sbjct: 225  YTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQ 284

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME------- 625
            ++  Y K+D +   + +F+ M   + V++N +IS Y     +  +  +  +M+       
Sbjct: 285  ILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRR 344

Query: 626  ------EEEIKPDLVSW----------------------NSLVSGYSIWGQSKEALVIIH 657
                     I  +L S                       NSLV  Y+      EA +I  
Sbjct: 345  NFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFK 404

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
             +       + V+WT+LISG +Q   +   LK F +M+  +++ + +T +++L+   G  
Sbjct: 405  SLSQR----STVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFA 460

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             L  GK++H   +++G +++ +  +GL+DMY+K G++K A +VF +  ++   SWN +I 
Sbjct: 461  SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 520

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
             +A  G+G+ AI  F +++++G QPD+++   +L AC + G VE+G ++F +MS  Y I 
Sbjct: 521  AYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGIT 580

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P  +HY+CM+DLLG+ G   EA   +  MPF+PD  +W ++L +CRI+ +   AE A+ +
Sbjct: 581  PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQ 640

Query: 898  LFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            LF +E   ++A Y  M N+ A + +WE+V  ++ +M E G+K V  +SW++++  +HVFS
Sbjct: 641  LFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFS 700

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            +    HP   EI  ++  L +E+++ GY PDT  V QDIDE+ K + L  H+E+LA+ + 
Sbjct: 701  SNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFA 760

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            L+ T    PI V+KN R C DCH A K +S +  R I  + G
Sbjct: 761  LISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQPG 802



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 155/673 (23%), Positives = 274/673 (40%), Gaps = 122/673 (18%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y++ GD +SA   F     R+   W+  +  Y        E  +++ ++     +
Sbjct: 80  TMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAG-NNHFDEAFKLFRQMCRSCTL 138

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC--ALMNFYGKCRDVESAN 349
                 T +L  C   +      +VHA  +K GFD ++ L     L+  Y + R ++ A 
Sbjct: 139 PDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLAC 198

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            LF E+ D +D + +N +I    ++  +  AI LF +M+ S  K    T   +L+A   +
Sbjct: 199 VLFEEILD-KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL 257

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
             F  G+Q+HG  + +    + SV N ++  YS+++++ L TR                 
Sbjct: 258 HDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRV-LETR----------------- 299

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
                        +LFN+M     + D +++N ++S +     Y+  L L R MQ +GF 
Sbjct: 300 -------------NLFNEMP----ELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFD 342

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                 + +L     L  L+ GR+ H   +    D  L+VG SL+DMY K +    A+ +
Sbjct: 343 RRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELI 402

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------------- 632
           F ++  R+ V+W +LISGY  KGL     K+  +M    ++ D                 
Sbjct: 403 FKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASL 462

Query: 633 ------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                             + S + LV  Y+  G  K+A+ +   M +     N V+W +L
Sbjct: 463 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR----NAVSWNAL 518

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           IS    N +   ++  F +M Q  ++P+S ++  +L  C   G ++ G E          
Sbjct: 519 ISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEF--------- 569

Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                               ++   ++  +  K    + CM+      G   EA  L  E
Sbjct: 570 -------------------FQAMSPIYGITPKKK--HYACMLDLLGRNGRFAEAEKLMDE 608

Query: 795 LLETGFQPDAITFTALLAAC---KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
           +    F+PD I ++++L AC   KN  L E   +   SM      +     Y  M ++  
Sbjct: 609 M---PFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEK----LRDAAAYVSMSNIYA 661

Query: 852 KAGYLDEAWDFIR 864
            AG     W+ +R
Sbjct: 662 AAG----KWENVR 670



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%)

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           K+      +I  Y K G+L SAR +F    ++T+ +W  ++  +A   +  EA  LF ++
Sbjct: 73  KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132

Query: 796 LETGFQPDAITFTALLAACKNS 817
             +   PD +TFT LL  C ++
Sbjct: 133 CRSCTLPDYVTFTTLLPGCNDA 154


>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 177/370 (47%), Positives = 246/370 (66%)

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
            M+ +L+ C  +  L+ GK++H   +K GF  D  V+ GL+DMY K G ++ A+EVF K  
Sbjct: 1    MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
               +ASWN MI G A +G GKEA+LLF ++L+TG +P+ ITF  +L+ C ++GLV+EG  
Sbjct: 61   EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            YFDSM+ D+ I P  EHYSCMVDL G+AG LDEA +FI  MP +P+A++WG+LLG+CR+H
Sbjct: 121  YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
            G++E AE A  +L +L P N   Y L+ N+ A + RW+D  ++R  M +  VK     SW
Sbjct: 181  GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            I++   VH F    + HP   EIY  L  L  +MK  GY+P+T  V  D++EE+K  +L 
Sbjct: 241  IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
             H+EKLAI +G++ T     IRV+KN RVC DCHTA K++S +  REI LRD  RFHHF+
Sbjct: 301  HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360

Query: 1066 EGECSCNDCW 1075
            +G+CSC D W
Sbjct: 361  DGQCSCGDYW 370



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 4/177 (2%)

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           +L+A   +  L+ G++ H  I++ G + D+ V   L+DMY K   +++AQEVF  +   +
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           + +WN++ISG    G    A  +  QM +  +KP+ +++  ++SG S  G   E      
Sbjct: 64  VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123

Query: 658 HM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            M ++ GI P    ++ ++    +     E+L F  QM    ++PN++   SLL  C
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMP---VEPNASVWGSLLGAC 177



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 5/185 (2%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL+ C  + A   G +VHA +IK GF+ DV +   L++ YGKC  +E A ++FS++  LE
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKL--LE 61

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            D+  WN +I    ++   + A+ LF +M  +  K    T V +L  C+  G   EG+  
Sbjct: 62  PDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNY 121

Query: 419 HGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLG 476
              + +   +       +C++ ++ R   L+ A    + M  + N S W S++ +    G
Sbjct: 122 FDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHG 181

Query: 477 YVDVA 481
            +++A
Sbjct: 182 NIELA 186



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 37/227 (16%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L+ACA V A  +GKQ+H  ++K   E ++SV N L+ MY +                  
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGK------------------ 45

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                         G ++ A  +F+K+    ++PD+ +WN ++SG   HG  +  + L  
Sbjct: 46  -------------CGRIEDAQEVFSKL----LEPDVASWNAMISGLAQHGCGKEAVLLFE 88

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN-GLDYDLYVGTSLMDMYVKN 580
            M   G +PN  +  VVL   +   L+  GR     + R+ G+       + ++D++ + 
Sbjct: 89  QMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRA 148

Query: 581 DCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            CL  A    + M    N   W SL+      G    A++ + Q+ E
Sbjct: 149 GCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIE 195



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 6/168 (3%)

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
           D+   N LV  Y   G+ ++A  +   +    + P+V +W ++ISG  Q+   +E++  F
Sbjct: 32  DVSVSNGLVDMYGKCGRIEDAQEVFSKL----LEPDVASWNAMISGLAQHGCGKEAVLLF 87

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSK 750
            QM Q  +KPN  T   +L  C   GL+  G+     +   +G    A   + ++D++ +
Sbjct: 88  EQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGR 147

Query: 751 SGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLE 797
           +G L  A     +   +  AS W  ++    ++GN + A     +L+E
Sbjct: 148 AGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIE 195


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/479 (41%), Positives = 281/479 (58%), Gaps = 2/479 (0%)

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
            N   +  LI   C        K++   + +     D  S N+L+  Y  +   ++A  + 
Sbjct: 93   NKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVF 152

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
             +M       N V+W ++I+  +Q+    E+   F +M+ E++  +    +S+L  C GL
Sbjct: 153  DNMPQRD--RNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 210

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
            G L+ GK IH    K+G   D+ +AT +IDMY K G L+ A EVF +   K ++SWNCMI
Sbjct: 211  GALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI 270

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G A++G G+ AI LF E+      PD ITF  +L+AC +SGLVEEG  YF  M+    +
Sbjct: 271  GGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGL 330

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P +EH+ CMVDLLG+AG L+EA   I  MP  PDA + GAL+G+CRIHG+ E  E   +
Sbjct: 331  KPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGK 390

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            ++ +LEP NS  Y L+ NL A + RWEDV ++R  M++ GVK    +S I+ +  V  F 
Sbjct: 391  KVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFI 450

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
            A G  HP   EIY +L  ++  ++ +GYVPDT  V  DIDEEEK   L  H+EKLAI +G
Sbjct: 451  AGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFG 510

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+KTK    +R+ KN R+C DCH A+K +S V  REI +RD  RFHHFR G CSC D W
Sbjct: 511  LLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 196/450 (43%), Gaps = 56/450 (12%)

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           LR +   N I ++  M   S      T   +++AC    A  EGKQIH +VLK    ++ 
Sbjct: 70  LRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADG 129

Query: 432 SVCNCLISMYSRNNKLELATRVFDSM--KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
              N LI MY     LE A RVFD+M  +D N  SWN+MI++Y     +  A++LF++M 
Sbjct: 130 FSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMR 189

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
              +  D      +LS                                   A T L  L+
Sbjct: 190 LENVVLDKFVAASMLS-----------------------------------ACTGLGALE 214

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G+  HGYI ++G++ D  + T+++DMY K  CL+ A EVF+ +  + I +WN +I G  
Sbjct: 215 QGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA 274

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNV 668
             G    A ++  +ME E + PD +++ +++S  +  G  +E      +M    G+ P +
Sbjct: 275 MHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGM 334

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
             +  ++    +     E+ K   +M    + P++  + +L+  C   G  + G++I   
Sbjct: 335 EHFGCMVDLLGRAGLLEEARKLINEMP---VNPDAGVLGALVGACRIHGNTELGEQIGKK 391

Query: 729 CL--------KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM---IM 777
            +        +   + + Y + G  +  +K   L + R V +      + S + +   I 
Sbjct: 392 VIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIA 451

Query: 778 GFAIYGNGKEAILLFHELLET----GFQPD 803
           G   +   KE      E+LET    G+ PD
Sbjct: 452 GGRAHPQAKEIYAKLDEILETIRSIGYVPD 481



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 155/364 (42%), Gaps = 45/364 (12%)

Query: 175 ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLI 234
           A PP+ + AK  +L       C          ++ +K  H+Q+I++G   ++D M + + 
Sbjct: 9   ASPPSLSSAKAHKLPLYGLDSC--------STMAELKQYHSQIIRLGLSADNDAMGRVI- 59

Query: 235 FHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRS 294
                   F + +K+ +L +  +                  +  + ++  +  K V    
Sbjct: 60  -------KFCAISKSGYLRWQLA------------------RNCIFMYSRMLHKSVSPNK 94

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
                +++ C    A   G ++HA ++K GF  D      L++ Y   + +E A ++F  
Sbjct: 95  FTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDN 154

Query: 355 VSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           +   + + + WN +I   +++ +   A  LF  M+  +          ML AC  +GA  
Sbjct: 155 MPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALE 214

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           +GK IHGY+ KS +E +  +   +I MY +   LE A+ VF+ +    +SSWN MI    
Sbjct: 215 QGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA 274

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITW-----NCLLSGHFTHGSY-----QNVLTLLRGM 523
             G  + A  LF +M    + PD IT+      C  SG    G +       VL L  GM
Sbjct: 275 MHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGM 334

Query: 524 QSLG 527
           +  G
Sbjct: 335 EHFG 338



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 8/251 (3%)

Query: 211 KSKHAQMIKMGKIWNSDDM-VKSLIFHYLEFGDFTSAAKAF--FLYFSRSYADWSSFLED 267
           K  HA ++K G  + +D   + +LI  Y+ F     A + F       R+   W++ +  
Sbjct: 114 KQIHAHVLKFG--FGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAA 171

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           Y      + E   ++  +  + V+    +   +L  CT L A   G  +H  + K G + 
Sbjct: 172 YVQ-SNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIEL 230

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           D  L   +++ Y KC  +E A+++F+E+   +    WN +I     + K E AI+LF+EM
Sbjct: 231 DSKLATTVIDMYCKCGCLEKASEVFNELPQ-KGISSWNCMIGGLAMHGKGEAAIELFKEM 289

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNK 446
           +         T V +L ACA  G   EGK    Y+ +   L+  +    C++ +  R   
Sbjct: 290 EREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGL 349

Query: 447 LELATRVFDSM 457
           LE A ++ + M
Sbjct: 350 LEEARKLINEM 360



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 134/315 (42%), Gaps = 35/315 (11%)

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           SG+      +N + +   M      PN  +   +++A      ++ G++ H ++L+ G  
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            D +   +L+ MYV    L+ A+ VFDNM  ++RN V+WN++I+ Y        A  + +
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI------------------ 664
           +M  E +  D     S++S  +  G  ++   I  +++ SGI                  
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCG 246

Query: 665 -------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
                           + +W  +I G   +     +++ F +M++E + P+  T  ++L 
Sbjct: 247 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLS 306

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSAREVFRK-SANKTL 769
            C   GL++ GK       +   +K      G ++D+  ++G L+ AR++  +   N   
Sbjct: 307 ACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDA 366

Query: 770 ASWNCMIMGFAIYGN 784
                ++    I+GN
Sbjct: 367 GVLGALVGACRIHGN 381


>gi|115482524|ref|NP_001064855.1| Os10g0477200 [Oryza sativa Japonica Group]
 gi|110289259|gb|AAP54276.2| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|110289260|gb|ABG66139.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639464|dbj|BAF26769.1| Os10g0477200 [Oryza sativa Japonica Group]
 gi|215695099|dbj|BAG90290.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 699

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/719 (32%), Positives = 373/719 (51%), Gaps = 39/719 (5%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
            WN II   ++N +++ A+ +F EM +  S  A+  T+  +L AC  + A   GKQ+H YV
Sbjct: 13   WNCIISGCVQNARYDEALNIFCEMCESESPDAV--TVASILPACTGLMALGIGKQLHSYV 70

Query: 423  LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
            ++  ++ N+ + + LI MYS   +   A  VF ++++ N + WN +I SY     ++ AW
Sbjct: 71   IRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAIEEKNATVWNELIRSYINEERMNEAW 130

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
              F  M  + +QPD IT+N  ++ +   G  +   TLL  M  +G +PN  S++ ++   
Sbjct: 131  EAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAYTLLSNMVEIGLKPNVVSMNALISG- 189

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
                L  +GR +      + L+   Y       M V +D       +  N    N     
Sbjct: 190  ----LHHHGRHA------DALEAFRY-------MQVSSDGEAKGWALPGNSIQPNGTTIT 232

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
            S++S      L    K++        +  ++   + LV  Y   G    A  +   + N 
Sbjct: 233  SVLSLLTDLRLDRLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGDVGTADKVFRRISNK 292

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                NVVTW S+++   QN     +LK F +M + ++ PN  T+   L + G    LQ+G
Sbjct: 293  ----NVVTWNSILASYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALLSSGMTMALQHG 348

Query: 723  KEIHCLCLKNGFIKDAY---VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
            +E+H    KN    D Y   +A+ LIDMY K G ++ AR VF  +  K +A+WN ++  +
Sbjct: 349  RELHGYIRKN--WPDGYPTALASALIDMYGKCGKIEDARLVFECTDEKDIATWNAIMSAY 406

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
             ++    E   LF  + ++G QPD +TF  LL+ACK  G +EE  +YF SM   Y I PT
Sbjct: 407  LLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGSMEEARRYFYSMEDVYGIQPT 466

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            ++HY+CMVD++G AG L+E+ + I+ M  +PD  +W  LL +C++H +LE  E A++ LF
Sbjct: 467  LKHYTCMVDIMGMAGLLEESLELIQKMQLEPDGCLWSILLKACKLHSNLEIGEKAAKALF 526

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +LEP N++NY  + N+ A +  WE  E LR +M E G+      S + +   VH F A  
Sbjct: 527  ELEPNNTSNYMSLSNIYADNGLWESTEALRVAMTEQGLNVERQCSRLYLGTDVHTFEAGD 586

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID---EEEKGKVLLSHTEKLAIVYG 1016
            + HPA  +I      L   M++ GY P      QDI+     E   +   HTE++A+ YG
Sbjct: 587  SSHPAFEKILSTWNDLSDRMEQSGYPP------QDIEPYSNAEADPLSCQHTERIALCYG 640

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            L+  +    IR+ KN R+C +CH++ K++S    REIF+ DG  +HHF+ G CSC D W
Sbjct: 641  LISVRVHDLIRISKNFRMCMECHSSIKFISRDMNREIFVSDGCTYHHFQNGACSCGDMW 699



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 244/472 (51%), Gaps = 33/472 (6%)

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++P + +WNC++SG   +  Y   L +   M      P+  +V+ +L A T L  L  G+
Sbjct: 6   VKPGVNSWNCIISGCVQNARYDEALNIFCEMCE-SESPDAVTVASILPACTGLMALGIGK 64

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + H Y++R G+  ++Y+G+SL+ MY +      A+ VF  ++ +N   WN LI  Y  + 
Sbjct: 65  QLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAIEEKNATVWNELIRSYINEE 124

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
               A +    M+E  ++PD +++NS ++ Y+  GQ ++A  ++ +M   G+ PNVV+  
Sbjct: 125 RMNEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAYTLLSNMVEIGLKPNVVSMN 184

Query: 673 SLISGSLQNENYRESLKFFIQMQ-------------QEDIKPNSTTMSSLLQTCGGLGLL 719
           +LISG   +  + ++L+ F  MQ                I+PN TT++S+L     L L 
Sbjct: 185 ALISGLHHHGRHADALEAFRYMQVSSDGEAKGWALPGNSIQPNGTTITSVLSLLTDLRLD 244

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
           + GKE+HC   ++G I + +V++ L+D+Y K+G++ +A +VFR+ +NK + +WN ++  +
Sbjct: 245 RLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGDVGTADKVFRRISNKNVVTWNSILASY 304

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
                 + A+ LFHE++++   P+ +T    L +   +  ++ G +    +  ++     
Sbjct: 305 RQNRKPEIALKLFHEMIKSNLLPNLVTLQIALLSSGMTMALQHGRELHGYIRKNWPDGYP 364

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC---RIHGHLEYAEIASR 896
               S ++D+ GK G +++A   +     + D   W A++ +    RI G +       +
Sbjct: 365 TALASALIDMYGKCGKIEDA-RLVFECTDEKDIATWNAIMSAYLLHRIPGEV-------K 416

Query: 897 RLFK------LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV-GVKSVL 941
           +LFK      ++P +   + ++++        E+  R  +SM++V G++  L
Sbjct: 417 KLFKYIEQSGIQP-DPVTFIILLSACKQEGSMEEARRYFYSMEDVYGIQPTL 467



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 206/468 (44%), Gaps = 62/468 (13%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL  CT LMA  +G ++H+ +I+ G   +V++  +L+  Y +C +   A  +F+ + + +
Sbjct: 50  ILPACTGLMALGIGKQLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAIEE-K 108

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +  +WNE+I   +  E+   A + FR M+ +  +  + T    + A A+ G   +   + 
Sbjct: 109 NATVWNELIRSYINEERMNEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAYTLL 168

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK---DHNLSSW----------- 465
             +++  L+ N+   N LIS    + +   A   F  M+   D     W           
Sbjct: 169 SNMVEIGLKPNVVSMNALISGLHHHGRHADALEAFRYMQVSSDGEAKGWALPGNSIQPNG 228

Query: 466 ---------------------------------NSMISS-----YTGLGYVDVAWSLFNK 487
                                            N  +SS     Y   G V  A  +F +
Sbjct: 229 TTITSVLSLLTDLRLDRLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGDVGTADKVFRR 288

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           +++     +++TWN +L+ +  +   +  L L   M      PN  ++ + L +      
Sbjct: 289 ISNK----NVVTWNSILASYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALLSSGMTMA 344

Query: 548 LKYGRESHGYILRNGLD-YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
           L++GRE HGYI +N  D Y   + ++L+DMY K   +++A+ VF+    ++I  WN+++S
Sbjct: 345 LQHGRELHGYIRKNWPDGYPTALASALIDMYGKCGKIEDARLVFECTDEKDIATWNAIMS 404

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIY 665
            Y    +    KK+   +E+  I+PD V++  L+S     G  +EA    + M++  GI 
Sbjct: 405 AYLLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGSMEEARRYFYSMEDVYGIQ 464

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           P +  +T ++          ESL+   +MQ E   P+    S LL+ C
Sbjct: 465 PTLKHYTCMVDIMGMAGLLEESLELIQKMQLE---PDGCLWSILLKAC 509



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 3/224 (1%)

Query: 659 MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
           M+  G+ P V +W  +ISG +QN  Y E+L  F +M + +  P++ T++S+L  C GL  
Sbjct: 1   MRLRGVKPGVNSWNCIISGCVQNARYDEALNIFCEMCESE-SPDAVTVASILPACTGLMA 59

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L  GK++H   ++ G   + Y+ + LI MYS+ G    AR VF     K    WN +I  
Sbjct: 60  LGIGKQLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAIEEKNATVWNELIRS 119

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
           +       EA   F  + E G QPD IT+ + +AA   +G  E+ +    +M  +  + P
Sbjct: 120 YINEERMNEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAYTLLSNM-VEIGLKP 178

Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG-ALLGS 881
            +   + ++  L   G   +A +  R M    D    G AL G+
Sbjct: 179 NVVSMNALISGLHHHGRHADALEAFRYMQVSSDGEAKGWALPGN 222



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 3/248 (1%)

Query: 285 LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           L G  +      +T +L L T L    LG EVH    + G   ++ +   L++ YGK  D
Sbjct: 219 LPGNSIQPNGTTITSVLSLLTDLRLDRLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGD 278

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           V +A+K+F  +S+ ++ + WN I+    +N K E A+KLF EM  S+      T+   L 
Sbjct: 279 VGTADKVFRRISN-KNVVTWNSILASYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALL 337

Query: 405 ACAKVGAFHEGKQIHGYVLKSALES-NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +     A   G+++HGY+ K+  +    ++ + LI MY +  K+E A  VF+   + +++
Sbjct: 338 SSGMTMALQHGRELHGYIRKNWPDGYPTALASALIDMYGKCGKIEDARLVFECTDEKDIA 397

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +WN+++S+Y           LF  +  S IQPD +T+  LLS     GS +        M
Sbjct: 398 TWNAIMSAYLLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGSMEEARRYFYSM 457

Query: 524 QSL-GFRP 530
           + + G +P
Sbjct: 458 EDVYGIQP 465



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 6/229 (2%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L+  Y + GD  +A K F    +++   W+S L  Y     + +  L+++ E+    ++ 
Sbjct: 269 LVDLYGKTGDVGTADKVFRRISNKNVVTWNSILASYRQ-NRKPEIALKLFHEMIKSNLLP 327

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD-FDVHLKCALMNFYGKCRDVESANKL 351
               L I L      MA   G E+H  + K   D +   L  AL++ YGKC  +E A  +
Sbjct: 328 NLVTLQIALLSSGMTMALQHGRELHGYIRKNWPDGYPTALASALIDMYGKCGKIEDARLV 387

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E +D +D   WN I+   L +       KLF+ ++ S  +    T + +L AC + G+
Sbjct: 388 F-ECTDEKDIATWNAIMSAYLLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGS 446

Query: 412 FHEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
             E ++ + Y ++    ++  L    C++ +      LE +  +   M+
Sbjct: 447 MEEARR-YFYSMEDVYGIQPTLKHYTCMVDIMGMAGLLEESLELIQKMQ 494


>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/639 (35%), Positives = 325/639 (50%), Gaps = 79/639 (12%)

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD--I 497
            MYS+      A  V+  M+  N  S N +I+ Y   G +  A  +F++M      PD  +
Sbjct: 1    MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEM------PDRKL 54

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
             TWN +++G       +  L+L R M  LGF P+  ++  V      LR +  G++ HGY
Sbjct: 55   TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 114

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
             ++ GL+ DL V +SL  MY++N  LQ+ + V  +M  RN+VAWN+LI G        NA
Sbjct: 115  TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG--------NA 166

Query: 618  KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
            +                            G  +  L +   MK SG  PN +T+ +++S 
Sbjct: 167  QN---------------------------GCPETVLYLYKMMKISGCRPNKITFVTVLS- 198

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
                                              +C  L +   G++IH   +K G    
Sbjct: 199  ----------------------------------SCSDLAIRGQGQQIHAEAIKIGASSV 224

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
              V + LI MYSK G L  A + F +  ++    W+ MI  +  +G G EAI LF+ + E
Sbjct: 225  VAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAE 284

Query: 798  -TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYL 856
             T  + + + F  LL AC +SGL ++G + FD M   Y   P ++HY+C+VDLLG+AG L
Sbjct: 285  QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 344

Query: 857  DEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
            D+A   IR+MP K D  IW  LL +C IH + E A+   + + +++P +SA Y L+ N+ 
Sbjct: 345  DQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVH 404

Query: 917  AMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLV 976
            A + RW DV  +R SM +  VK     SW +    VH F         + EIY  L  L 
Sbjct: 405  ASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELT 464

Query: 977  SEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
             EMK  GY PDT  V  D+DEEEK   L+ H+EKLA+ + LM     APIR+IKN RVCS
Sbjct: 465  LEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCS 524

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            DCH A KY+S+++ REI LRDG+RFHHF  G+CSC D W
Sbjct: 525  DCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 166/413 (40%), Gaps = 78/413 (18%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L+N Y +  D+ +A K+F E+ D      WN +I   ++ E  E  + LFREM       
Sbjct: 29  LINGYVRAGDLVNARKVFDEMPD-RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSP 87

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T+  +    A + +   G+QIHGY +K  LE +L V + L  MY RN KL+    V 
Sbjct: 88  DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 147

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            SM   NL +WN++I      G  +    L+  M  S  +P+ IT+              
Sbjct: 148 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF-------------- 193

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                                  VL + ++L +   G++ H   ++ G    + V +SL+
Sbjct: 194 ---------------------VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 232

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE------ 628
            MY K  CL +A + F   ++ + V W+S+IS Y F G    A ++ N M E+       
Sbjct: 233 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 292

Query: 629 -------------------------------IKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
                                           KP L  +  +V      G   +A  II 
Sbjct: 293 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 352

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            M    I  ++V W +L+S    ++N   + + F ++ Q  I PN +    LL
Sbjct: 353 SMP---IKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSACYVLL 400



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 165/380 (43%), Gaps = 44/380 (11%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y+  GD  +A K F     R    W++ +     F    +E L ++ E+HG G   
Sbjct: 29  LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFN-EEGLSLFREMHGLGFSP 87

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY---GKCRDVESAN 349
               L  +      L +  +G ++H   IK G + D+ +  +L + Y   GK +D E   
Sbjct: 88  DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE--- 144

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            +      + + + WN +IM   +N   E  + L++ M+ S  +    T V +L +C+ +
Sbjct: 145 -IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 203

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
               +G+QIH   +K    S ++V + LISMYS+   L  A + F   +D +   W+SMI
Sbjct: 204 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 263

Query: 470 SSYTGLGYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           S+Y   G  D A  LFN M   + ++ + + +                L LL      G 
Sbjct: 264 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAF----------------LNLLYACSHSGL 307

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           +  G            L L     E +G+  + GL +     T ++D+  +  CL  A+ 
Sbjct: 308 KDKG------------LELFDMMVEKYGF--KPGLKH----YTCVVDLLGRAGCLDQAEA 349

Query: 589 VFDNMKNR-NIVAWNSLISG 607
           +  +M  + +IV W +L+S 
Sbjct: 350 IIRSMPIKTDIVIWKTLLSA 369


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15930-like [Glycine max]
          Length = 650

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/592 (34%), Positives = 336/592 (56%), Gaps = 20/592 (3%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
             P +  WN ++ G+      +N +++   M +   +P+  +    L+  T    L++G+E
Sbjct: 69   HPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKE 128

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
               + +++G D +L+V  + + M+     +  A +VFD      +V WN ++SGY     
Sbjct: 129  LLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQ 188

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGY----------SIWGQSKEALVIIHHMKNSG 663
            F  +K +L      ++K   + W   +  Y          +  G+  EA  +  +MK   
Sbjct: 189  FKISKMLLVLSACSKLKD--LEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTR- 245

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               +VV+WT++I G L+  ++  +L  F +MQ  ++KP+  TM S+L  C  LG L+ G+
Sbjct: 246  ---DVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGE 302

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
             +     KN    D++V   L+DMY K GN++ A++VF++   K   +W  MI+G AI G
Sbjct: 303  WVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAING 362

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            +G+EA+ +F  ++E    PD IT+  +L AC    +V++G  +F +M+  + I PT+ HY
Sbjct: 363  HGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHY 418

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
             CMVDLLG  G L+EA + I  MP KP++ +WG+ LG+CR+H +++ A++A++++ +LEP
Sbjct: 419  GCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEP 478

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             N A Y L+ N+ A S +WE++ ++R  M E G+K     S ++++  V+ F A    HP
Sbjct: 479  ENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHP 538

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
             + EIY +L +++  + K GY PDT  V+ D+ EE+K   L  H+EKLAI Y L+ +   
Sbjct: 539  QSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPG 598

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              IR++KN R+C DCH  AK +S    RE+ ++D  RFHHFR G CSCN+ W
Sbjct: 599  VTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCNNFW 650



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 126/524 (24%), Positives = 217/524 (41%), Gaps = 95/524 (18%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYL---EFGDFTSAAKAFFLYFSRSYA 259
           K + +  +K  H+  IKMG   +SD + ++ +  +    E G+   A + F      S  
Sbjct: 16  KCKSMYQLKQIHSHTIKMG--LSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMF 73

Query: 260 DWSSFLEDYESFG----GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            W++ ++ Y        G    LL +   +      F        LK  T+ MA   G E
Sbjct: 74  IWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTF-----PFSLKGFTRDMALQHGKE 128

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +    +K GFD ++ ++ A ++ +  C  V+ A+K+F ++ D  + + WN  IM+   N 
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVF-DMGDACEVVTWN--IMLSGYN- 184

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
                    R  QF  +K     ++ +L AC+K+     GK I  Y+    +E   + C 
Sbjct: 185 ---------RVKQFKISK-----MLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACG 230

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
                     +++ A  VFD+MK  ++ SW +MI  Y  + +   A +LF +M  S ++P
Sbjct: 231 ----------EMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKP 280

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
           D           FT  S                         +L A   L  L+ G    
Sbjct: 281 D----------EFTMVS-------------------------ILIACALLGALELGEWVK 305

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
             I +N    D +VG +L+DMY K   ++ A++VF  M  ++   W ++I G    G   
Sbjct: 306 TCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGE 365

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-WGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
            A  M + M E  + PD +++  ++    +  G+S    + + H    GI P V  +  +
Sbjct: 366 EALAMFSNMIEASVTPDEITYIGVLCACMVDKGKSFFTNMTMQH----GIKPTVTHYGCM 421

Query: 675 IS-----GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +      G L+     E+L+  + M    +KPNS    S L  C
Sbjct: 422 VDLLGCVGCLE-----EALEVIVNMP---VKPNSIVWGSPLGAC 457



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 20/249 (8%)

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
           H + ++  +P++  W ++I G  +  +    +  ++ M   +IKP+  T    L+     
Sbjct: 61  HQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRD 120

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
             LQ+GKE+    +K+GF  + +V    I M+S  G +  A +VF       + +WN M+
Sbjct: 121 MALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIML 180

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE----------EGWKY 826
            G+      K + +L   +L    +   + +   +    N G+VE          E    
Sbjct: 181 SGYNRVKQFKISKMLL--VLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGV 238

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF---KPDATIWGALLGSCR 883
           FD+M T       +  ++ M+D   +  +   A    R M     KPD     ++L +C 
Sbjct: 239 FDNMKTR-----DVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACA 293

Query: 884 IHGHLEYAE 892
           + G LE  E
Sbjct: 294 LLGALELGE 302



 Score = 43.1 bits (100), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM--YSKSGNLKSAREVFRKSA 765
           SLL+ C  +  L   K+IH   +K G   D      +I      +SGN+  A +VF    
Sbjct: 12  SLLEKCKSMYQL---KQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIP 68

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           + ++  WN MI G++   + +  + ++  +L +  +PD  TF
Sbjct: 69  HPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTF 110


>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like
            [Glycine max]
          Length = 617

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/596 (34%), Positives = 326/596 (54%), Gaps = 47/596 (7%)

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            LF+++++    P+   W  L+  +   G     L+    M+     P   + S +  A  
Sbjct: 65   LFSQLHT----PNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACA 120

Query: 544  ELRLLKYGRESHGY-ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             +R    G + H   +L  G   DLYV  +++DMYVK   L+ A+ VFD M  R      
Sbjct: 121  AVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPER------ 174

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                                         D++SW  L+  Y+  G  + A  +   +   
Sbjct: 175  -----------------------------DVISWTGLIVAYTRIGDMRAARDLFDGLP-- 203

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                ++VTWT++++G  QN    ++L+ F +++ E ++ +  T+  ++  C  LG  +  
Sbjct: 204  --VKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYA 261

Query: 723  KEIHCLCLKNGF-IKD-AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
              I  +   +GF + D   V + LIDMYSK GN++ A +VF+    + + S++ MI+GFA
Sbjct: 262  NWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFA 321

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
            I+G  + AI LF+++LETG +P+ +TF  +L AC ++GLV++G + F SM   Y + PT 
Sbjct: 322  IHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTA 381

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            E Y+CM DLL +AGYL++A   + TMP + D  +WGALLG+  +HG+ + AEIAS+RLF+
Sbjct: 382  ELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFE 441

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI-DQIVHVFSAEG 959
            LEP N  NY L+ N  A + RW+DV ++R  + E  +K    WSW++  + ++H F A  
Sbjct: 442  LEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGD 501

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP   EI  EL  L+  +K +GY P+   +   I++ EK  +L++H+EKLA+ +GL+ 
Sbjct: 502  VSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGINDREKRLLLMAHSEKLALAFGLLS 561

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            T   + I+++KN R+C DCH      S V GR+I +RD  RFHHF  G CSC++ W
Sbjct: 562  TDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNTRFHHFLNGACSCSNFW 617



 Score =  120 bits (302), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 152/325 (46%), Gaps = 17/325 (5%)

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LFS++    +   W  +I           A+  +  M+      IS T   +  ACA V 
Sbjct: 65  LFSQLHT-PNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVR 123

Query: 411 AFHEGKQIHGY-VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
               G Q+H   +L     S+L V N +I MY +   L  A  VFD M + ++ SW  +I
Sbjct: 124 HSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLI 183

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
            +YT +G +  A  LF+ +       D++TW  +++G+  +    + L + R ++  G  
Sbjct: 184 VAYTRIGDMRAARDLFDGLPVK----DMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVE 239

Query: 530 PNGSSVSVVLQAVTELRLLKYGR------ESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            +  ++  V+ A  +L   KY        ES G+    G+  ++ VG++L+DMY K   +
Sbjct: 240 IDEVTLVGVISACAQLGASKYANWIRDIAESSGF----GVGDNVLVGSALIDMYSKCGNV 295

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
           + A +VF  M+ RN+ +++S+I G+   G    A K+   M E  +KP+ V++  +++  
Sbjct: 296 EEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTAC 355

Query: 644 SIWGQSKEALVIIHHM-KNSGIYPN 667
           S  G   +   +   M K  G+ P 
Sbjct: 356 SHAGLVDQGQQLFASMEKCYGVAPT 380



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 137/312 (43%), Gaps = 25/312 (8%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y   GD  +A   F     +    W++ +  Y        + LEV+  L  +GV  
Sbjct: 182 LIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQ-NAMPMDALEVFRRLRDEGVEI 240

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKR-------GFDFDVHLKCALMNFYGKCRDV 345
               L  ++  C +L     G   +A+ I+        G   +V +  AL++ Y KC +V
Sbjct: 241 DEVTLVGVISACAQL-----GASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNV 295

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           E A  +F  + +  +   ++ +I+    + +   AIKLF +M  +  K    T V +L A
Sbjct: 296 EEAYDVFKGMRE-RNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTA 354

Query: 406 CAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLS 463
           C+  G   +G+Q+   + K   +     +  C+  + SR   LE A ++ ++M  + + +
Sbjct: 355 CSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGA 414

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSR---IQPDIITWNCLLSGHF-THGSYQNVLTL 519
            W +++ +    G  DVA     ++ S R   ++PD I    LLS  + + G + +V  +
Sbjct: 415 VWGALLGASHVHGNPDVA-----EIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKV 469

Query: 520 LRGMQSLGFRPN 531
            + ++    + N
Sbjct: 470 RKLLREKNLKKN 481


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like
            [Cucumis sativus]
          Length = 650

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 216/670 (32%), Positives = 354/670 (52%), Gaps = 80/670 (11%)

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL--ELATRVFDSMKDHNLSSWNSMI 469
            F + KQ+H +++++ L     V   LI M ++ +         VF  +   N   W +MI
Sbjct: 55   FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMI 114

Query: 470  SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
              Y   G +  + + + +M    + P   T++ L                        F+
Sbjct: 115  RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSAL------------------------FK 150

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGY-ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
              G+++++ L           G++ H   IL  G   DLYVG S++D+YVK         
Sbjct: 151  ACGAALNMDL-----------GKQVHAQTILIGGFASDLYVGNSMIDLYVK--------- 190

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
                                C  G    A+K+ ++M E     D+VSW  L+  Y+ +G 
Sbjct: 191  --------------------C--GFLGCARKVFDEMSER----DVVSWTELIVAYAKYGD 224

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             + A  +   +       ++V WT++++G  QN   +E+L++F +MQ   ++ +  T++ 
Sbjct: 225  MESASGLFDDLP----LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 280

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG--LIDMYSKSGNLKSAREVFRKSAN 766
            ++  C  LG +++   I  +  ++GF     V  G  LIDMYSK G+   A +VF     
Sbjct: 281  VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE 340

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            + + S++ MI+G+A++G    A+ LFH++L+T  +P+ +TF  +L+AC ++GLVE+G + 
Sbjct: 341  RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 400

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F  M   + + P+ +HY+CMVDLLG+AG L+EA D ++TMP +P+  +WGALLG+CRIHG
Sbjct: 401  FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            + + A+IA+  LFKLEP    NY L+ N+ A + RWE+V +LR  + E G K     SW 
Sbjct: 461  NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 520

Query: 947  Q-IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLL 1005
            +  +  +H F A    HP + EI   L  L+  ++  GY P+      D+ ++EK ++L+
Sbjct: 521  EGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILM 580

Query: 1006 SHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
            SH+EKLA+ YGL+ T++   I+++KN R+C DCH      S + GREI +RD  RFHHF 
Sbjct: 581  SHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFH 640

Query: 1066 EGECSCNDCW 1075
             G CSC + W
Sbjct: 641  NGTCSCGNFW 650



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 150/335 (44%), Gaps = 39/335 (11%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSS 263
            S +K  HA +I+ G    S  + K  +   L   D    +    ++   +Y +   W++
Sbjct: 55  FSQIKQVHAHIIRNGLSQCSYVLTK--LIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTA 112

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA-SLIK 322
            +  Y +  G + E    +  +   GV   S   + + K C   +   LG +VHA +++ 
Sbjct: 113 MIRGY-ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILI 171

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD------------------------- 357
            GF  D+++  ++++ Y KC  +  A K+F E+S+                         
Sbjct: 172 GGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGL 231

Query: 358 -----LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
                L+D + W  ++    +N + + A++ F++MQ    +    T+  ++ ACA++GA 
Sbjct: 232 FDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV 291

Query: 413 HEGKQIHGYVLKSAL--ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
                I     +S      N+ V + LI MYS+    + A +VF+ MK+ N+ S++SMI 
Sbjct: 292 KHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMIL 351

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            Y   G    A  LF+ M  + I+P+ +T+  +LS
Sbjct: 352 GYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 140/309 (45%), Gaps = 19/309 (6%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y ++GD  SA+  F     +    W++ +  Y    G  +E LE + ++   G+  
Sbjct: 215 LIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQ-NGRPKEALEYFQKMQDVGMET 273

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKR-------GFDFDVHLKCALMNFYGKCRDV 345
               L  ++  C +L     G   HA+ I+        G   +V +  AL++ Y KC   
Sbjct: 274 DEVTLAGVISACAQL-----GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSP 328

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           + A K+F EV    +   ++ +I+    + +  +A++LF +M  +  +    T + +L A
Sbjct: 329 DEAYKVF-EVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSA 387

Query: 406 CAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLS 463
           C+  G   +G+Q+   + K   +  +     C++ +  R   LE A  +  +M  + N  
Sbjct: 388 CSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGG 447

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRG 522
            W +++ +    G  D+A    N++   +++P+ I    LLS  + + G ++ V  L + 
Sbjct: 448 VWGALLGACRIHGNPDIAQIAANEL--FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKV 505

Query: 523 MQSLGFRPN 531
           ++  GF+ N
Sbjct: 506 IREKGFKKN 514


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 792

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 229/791 (28%), Positives = 387/791 (48%), Gaps = 66/791 (8%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA ++  GF  D+ L   L         +  A  +F  V    D  L+N ++     N
Sbjct: 38   QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR-PDVFLFNVLMRGFSVN 96

Query: 375  EKWENAIKLFREMQFSS-AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
            E   +++ +F  ++ S+  K  S T    + A +       G  IHG  +    +S L +
Sbjct: 97   ESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLL 156

Query: 434  CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
             + ++ MY +  ++E A +VFD M                                    
Sbjct: 157  GSNIVKMYFKFWRVEDARKVFDRMP----------------------------------- 181

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGR 552
            + D I WN ++SG+  +  Y   + + R + +    R + +++  +L AV EL+ L+ G 
Sbjct: 182  EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGM 241

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC--- 609
            + H    + G     YV T  + +Y K   ++ A  +F   +  +IVA+N++I GY    
Sbjct: 242  QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNG 301

Query: 610  --------FKGLFVNAKKM-----------------LNQMEEEEIKPDLVSWNSLVSGYS 644
                    FK L ++  K+                 +  +    +K + +S  S+ +  +
Sbjct: 302  ETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALT 361

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                    +     + +     ++ +W ++ISG  QN    +++  F +MQ  +  PN  
Sbjct: 362  TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPV 421

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T++ +L  C  LG L  GK +H L     F    YV+T LI MY+K G++  AR +F   
Sbjct: 422  TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFM 481

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K   +WN MI G+ ++G+G+EA+ +F E+L +G  P  +TF  +L AC ++GLV+EG 
Sbjct: 482  PKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGD 541

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            + F+SM   Y   P+++HY+C+VD+LG+AG+L  A  FI  MP +P  ++W  LLG+CRI
Sbjct: 542  EIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRI 601

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H     A   S +LF+L+P N   + L+ N+ +    +     +R +  +  +     ++
Sbjct: 602  HKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYT 661

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
             I+I +  HVF++    HP    I+ +L  L  +M++ GY P+T     D++EEE+  ++
Sbjct: 662  LIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMV 721

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+E+LAI +GL+ T+    IR+IKN RVC DCHTA K +S +  R I +RD  RFHHF
Sbjct: 722  KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHF 781

Query: 1065 REGECSCNDCW 1075
            ++G CSC D W
Sbjct: 782  KDGVCSCGDYW 792



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 230/501 (45%), Gaps = 67/501 (13%)

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           S+L+  +  I ++   N + L T++   + D               LG +  A  +F  +
Sbjct: 34  SHLAQTHAQIVLHGFRNDISLLTKLTQRLSD---------------LGAIYYARDIFLSV 78

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRL 547
                +PD+  +N L+ G   + S  + L +   + +S   +PN S+ +  + A +  R 
Sbjct: 79  Q----RPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRD 134

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            + G   HG  + +G D +L +G++++ MY K   +++A++VFD M  ++ + WN++ISG
Sbjct: 135 DRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG 194

Query: 608 YCFKGLFVNAKKMLNQMEEE-----------EIKPDLVSWNSL----------------- 639
           Y    ++V + ++   +  E           +I P +     L                 
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254

Query: 640 --------VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
                   +S YS  G+ K A  +    +     P++V + ++I G   N     SL  F
Sbjct: 255 HDYVLTGFISLYSKCGKIKMASTLFREFRR----PDIVAYNAMIHGYTSNGETELSLSLF 310

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
            ++     K  S+T+ SL+   G L L+     IH   LK+ F+    V+T L  +YSK 
Sbjct: 311 KELMLSGAKLKSSTLVSLVPVSGHLMLIY---AIHGYSLKSNFLSHTSVSTALTTVYSKL 367

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
             ++SAR++F +S  K+L SWN MI G+   G  ++AI LF E+  + F P+ +T T +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCIL 427

Query: 812 AACKNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
           +AC   G +  G W +    STD+    +I   + ++ +  K G + EA      MP K 
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFE--SSIYVSTALIGMYAKCGSIAEARRLFDFMPKKN 485

Query: 871 DATIWGALLGSCRIHGHLEYA 891
           + T W  ++    +HGH + A
Sbjct: 486 EVT-WNTMISGYGLHGHGQEA 505



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 246/552 (44%), Gaps = 50/552 (9%)

Query: 166 SITNSPTSLALPPTDTLAKQAQLSCISSGFCF-LNETNKFRCLSSVKSKHAQMIKMGKIW 224
           S+  SP S +L     L K   L   SS + F ++  + FR   +    H Q I  G   
Sbjct: 94  SVNESPHS-SLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDG--C 150

Query: 225 NSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
           +S+ ++ S ++  Y +F     A K F     +    W++ +  Y      V E ++V+ 
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV-ESIQVFR 209

Query: 284 ELHGKGVI-FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
           +L  +      +  L  IL    +L    LG+++H+   K G     ++    ++ Y KC
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269

Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
             ++ A+ LF E     D + +N +I     N + E ++ LF+E+  S AK  S T+V +
Sbjct: 270 GKIKMASTLFREFRR-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSL 328

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           +     +   +    IHGY LKS   S+ SV   L ++YS+ N++E A ++FD   + +L
Sbjct: 329 VPVSGHLMLIY---AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSL 385

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            SWN+MIS YT  G  + A SLF +M +S   P+ +T  C+LS                 
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILS----------------- 428

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                             A  +L  L  G+  H  +     +  +YV T+L+ MY K   
Sbjct: 429 ------------------ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           +  A+ +FD M  +N V WN++ISGY   G    A  + ++M    I P  V++  ++  
Sbjct: 471 IAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYA 530

Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S  G  KE   I + M +  G  P+V  +  ++    +  + + +L+F   M    I+P
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMP---IQP 587

Query: 702 NSTTMSSLLQTC 713
             +   +LL  C
Sbjct: 588 GPSVWETLLGAC 599


>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/713 (31%), Positives = 358/713 (50%), Gaps = 118/713 (16%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +LQ  + V +  + KQ+H  +L+++L S  S+ + ++S+YS  N L  +  +F+S+    
Sbjct: 11   LLQNPSSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPS-- 67

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                             P  + W  ++  + +HG + + L+   
Sbjct: 68   --------------------------------PPTTLAWKSIIRCYTSHGLFLHSLSFFI 95

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M + G  P+ +    VL++ T ++ L++G   HG I+R G+ +DLY   +LM+MY K  
Sbjct: 96   QMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFW 155

Query: 582  CLQNA---QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
             L+     ++VFD  K  ++ +     S Y       + +K+   M + +I         
Sbjct: 156  SLEEVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMPKRDI--------- 201

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
                                          V+W ++ISG+ QN  + ++L    +M   D
Sbjct: 202  ------------------------------VSWNTVISGNAQNGMHEDALMMVREMGNAD 231

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            ++P+S T+SS+L        L  GKEIH   ++NG+  D ++ + LIDMY+K   +  + 
Sbjct: 232  LRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSC 291

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-------------------- 798
             VF         SWN +I G    G   E +  F ++L                      
Sbjct: 292  RVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLT 351

Query: 799  ----------------GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
                            G +P+ + F A+L AC ++GLV+E WKYF+SM+ DY IIP +EH
Sbjct: 352  TLHLGKQLHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEH 411

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            Y+ + DLLG+ G L+EA++FI  M  +P  ++W  LL +CR+H ++E AE  S++LF ++
Sbjct: 412  YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVD 471

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P N   Y L+ N+ + + RW+D  +LR +M + G+K     SWI+I   VH F A    H
Sbjct: 472  PQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSH 531

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P    I   L  L+ +M++ GYV DT  V  D++EE+K  +L SH+E+LAI +G++ T +
Sbjct: 532  PYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPA 591

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               IRV KN RVC DCHTA K++S + GREI +RD +RFHHF++G+CSC D W
Sbjct: 592  GTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 205/435 (47%), Gaps = 32/435 (7%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA +++        L   +++ Y     +  +  +F+ +      L W  II     +
Sbjct: 26  QLHAQILRTSLP-SPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             + +++  F +M  S           +L++C  +     G+ +HG +++  +  +L  C
Sbjct: 85  GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144

Query: 435 NCLISMYSRNNKLELAT---RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           N L++MYS+   LE      +VFD  K  ++ S     S Y  LG +   + +  K    
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYY--LGSLRKVFEMMPKR--- 199

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               DI++WN ++SG+  +G +++ L ++R M +   RP+  ++S VL    E   L  G
Sbjct: 200 ----DIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKG 255

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           +E HGY +RNG D D+++G+SL+DMY K   + ++  VF  +   + ++WNS+I+G    
Sbjct: 256 KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 315

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMKNSGIYP 666
           G+F    K   QM   +IKP+ VS++S++   +       G+     +I    +  G+ P
Sbjct: 316 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII----RMEGVKP 371

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           N V + ++++         E+ K+F  M Q+  I P     +++    G +G L+   E 
Sbjct: 372 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYE- 430

Query: 726 HCLCLKNGFIKDAYV 740
                   FI D ++
Sbjct: 431 --------FISDMHI 437



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 181/452 (40%), Gaps = 98/452 (21%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W S +  Y S G  +  L   + ++   G      +   +LK CT +     G  VH  +
Sbjct: 74  WKSIIRCYTSHGLFLHSL-SFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCI 132

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESAN---KLFSE--VSDL----------------- 358
           I+ G  FD++   ALMN Y K   +E  N   K+F E   SD+                 
Sbjct: 133 IRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKV 192

Query: 359 ------EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
                  D + WN +I    +N   E+A+ + REM  +  +  S T+  +L   A+    
Sbjct: 193 FEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNL 252

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            +GK+IHGY +++  ++++ + + LI MY++  +++ + RVF  +  H+  SWNS+I+  
Sbjct: 253 LKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGC 312

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              G  D     F +M  ++I                                   +PN 
Sbjct: 313 VQNGMFDEGLKFFQQMLIAKI-----------------------------------KPNH 337

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            S S ++ A   L  L  G++ HGYI+R                              + 
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIR-----------------------------MEG 368

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQSKE 651
           +K  N VA+ ++++     GL   A K  N M ++  I P L  + ++       G+ +E
Sbjct: 369 VKP-NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEE 427

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           A   I  M    I P    W++L++    ++N
Sbjct: 428 AYEFISDMH---IEPTGSVWSTLLAACRVHKN 456


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/660 (32%), Positives = 336/660 (50%), Gaps = 105/660 (15%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            KQ+H  V  + +  +L V N L+ M +++  L                            
Sbjct: 20   KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLV--------------------------- 52

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                 A  LFNKM     + D ++W+ ++ G   +G Y+      R +   G +P+  S+
Sbjct: 53   ----TAHLLFNKME----ERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSL 104

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              V++A  +   L  GR  H  +L+NGL  D +V ++L+DM                   
Sbjct: 105  PFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDM------------------- 145

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
                        Y   G+  NAK++ ++M     K DLV+   +++GY+  G+       
Sbjct: 146  ------------YAKCGMIDNAKQLFDRMP----KKDLVTRTVMIAGYAECGK------- 182

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                      PN                  ES   F QM+++   P+   M +++  C  
Sbjct: 183  ----------PN------------------ESWVLFDQMRRDGFVPDKVAMVTIVNACAK 214

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            LG +   + +H       +  D  + T +IDMY+K G++ S+RE+F +   K + SW+ M
Sbjct: 215  LGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAM 274

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I  +  +G G+EA+ LFH +L +G  P+ ITF +LL AC ++GLV++G + F  MS  Y 
Sbjct: 275  IGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYG 334

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            + P ++HY+CMVDLLG+AG LD+A   I  M  + D  IW A LG+CRIH  ++ AE A+
Sbjct: 335  VRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAA 394

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
            + L  L+  N  +Y L+ N+ A + RW+DV ++R+ M +  +K +  ++WI++D I++ F
Sbjct: 395  KLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRF 454

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             A    H  + EIY  L  L  +++  GYVPDT  V  D+DEE K  +L +H+EKLAI +
Sbjct: 455  GAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAF 514

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ T    PIR+ KN RVC DCH+  K +S +  R+I +RD  RFHHF+EG CSC D W
Sbjct: 515  GLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 183/384 (47%), Gaps = 37/384 (9%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           +VHA +   G   D+ +   L+    K +D+ +A+ LF+++ +  D + W+ +I   ++N
Sbjct: 21  QVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEE-RDPVSWSVMIGGFVKN 79

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             +E   + FRE+  + +K  + ++  +++AC        G+ IH  VLK+ L  +  VC
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           + L+ MY++   ++ A ++FD M   +L +   MI+ Y   G  + +W LF++M      
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRD--- 196

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
                                           GF P+  ++  ++ A  +L  +   R  
Sbjct: 197 --------------------------------GFVPDKVAMVTIVNACAKLGAMNKARLV 224

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H Y+       D+ +GT+++DMY K   + +++E+FD M+ +N+++W+++I  Y + G  
Sbjct: 225 HDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQG 284

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTS 673
             A ++ + M    I P+ +++ SL+   S  G   + L +   M  S G+ P+V  +T 
Sbjct: 285 REALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTC 344

Query: 674 LISGSLQNENYRESLKFFIQMQQE 697
           ++    +     ++L+    M+ E
Sbjct: 345 MVDLLGRAGRLDQALRLIENMEVE 368



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 156/341 (45%), Gaps = 14/341 (4%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
           F++   K R +  +K  HAQ+   G I +   +   L++   +  D  +A   F     R
Sbjct: 6   FISTLFKCRNIFQIKQVHAQVTTTG-IIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEER 64

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               WS  +  +    G+ +   + + EL   G    +  L  ++K C   M   +G  +
Sbjct: 65  DPVSWSVMIGGFVK-NGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLI 123

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR--- 373
           H++++K G   D  +   L++ Y KC  +++A +LF  +   + DL+   +++       
Sbjct: 124 HSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMP--KKDLVTRTVMIAGYAECG 181

Query: 374 --NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             NE W     LF +M+          +V ++ ACAK+GA ++ + +H YV       ++
Sbjct: 182 KPNESW----VLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDV 237

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            +   +I MY++   ++ +  +FD M+  N+ SW++MI +Y   G    A  LF+ M +S
Sbjct: 238 ELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNS 297

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPN 531
            I P+ IT+  LL      G   + L L   M  S G RP+
Sbjct: 298 GIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPD 338


>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
 gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
          Length = 670

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/677 (32%), Positives = 348/677 (51%), Gaps = 75/677 (11%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLS---VCNCLISMYSRNNKLELATRVFDSMK 458
            +++ C    A    +++H ++L S   SN     + N LI MY +  +L  A  +F+SM 
Sbjct: 66   LIRRCGAANAISAARRLHSHIL-SLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMP 124

Query: 459  DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
              N+ +W   +++++  G    A   F +M  S  +PD +T++ +L+             
Sbjct: 125  SRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILA------------- 171

Query: 519  LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
                                  A      +  GRE H Y   +GL  ++ VGT+++ MY 
Sbjct: 172  --------------------AIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYG 211

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
            K   L +A+  F+ ++ +N V WN++++ Y   G    A ++  +M +     D V WN+
Sbjct: 212  KCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDA----DSVCWNA 267

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            +++ Y+  G+ K+AL +   M ++                                   D
Sbjct: 268  MIAAYAQHGRGKQALDLYRSMHDT----------------------------------TD 293

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            + P   T  +++  C  L  L+ G+ IH       F  +  V+  L+ MY K G L  A 
Sbjct: 294  LAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEAL 353

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            +VF     K   SWN +I  +A +G+  +A+LL+ E+   G +P  +TF  LL+AC + G
Sbjct: 354  DVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGG 413

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            LV +G  YF  M  D+ I P++ H+ C++DLLG+ G L EA   +++MP + +A  W +L
Sbjct: 414  LVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSL 473

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            LG+C+ HG L+    A+ ++    P  S  Y L+ N+ A + RW+DVE++R  M   GVK
Sbjct: 474  LGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVK 533

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                 SWI+I  +VH F +  + HP   EIY EL  +V EMK LGYVPDT  V+ D++EE
Sbjct: 534  KSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEE 593

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            EK  +L+ H+EKLAIVYG M    ++ +R++KN RVC DCHTA K+MS + GR+I +RD 
Sbjct: 594  EKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDA 653

Query: 1059 ARFHHFREGECSCNDCW 1075
            ARFH F  G CSC D W
Sbjct: 654  ARFHLFENGSCSCRDYW 670



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 180/392 (45%), Gaps = 12/392 (3%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L+  YGKC  +  A +LF  +    +   W   +     N     A+  FR M  S  + 
Sbjct: 103 LIEMYGKCGRLPYARELFESMPS-RNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERP 161

Query: 395 --ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
             ++ +++    A     A  +G++IH Y   S L  N+ V   +ISMY +  +L+ A  
Sbjct: 162 DRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARA 221

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            F+ ++  N  +WN+M+++Y   G    A  LF +M+ +    D + WN +++ +  HG 
Sbjct: 222 AFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDA----DSVCWNAMIAAYAQHGR 277

Query: 513 YQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
            +  L L R M  +    P   +   V+    EL  LK GR  H  +     D +L V  
Sbjct: 278 GKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSN 337

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           +L+ MY K  CL  A +VF +MK ++ ++WN++IS Y + G    A  +  +M+ + +KP
Sbjct: 338 ALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKP 397

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKF 690
             V++  L+S  S  G   + L   + M++   I P+V  +  +I    +     E+   
Sbjct: 398 TEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELV 457

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
              M    I+ N+    SLL  C   G L+ G
Sbjct: 458 LKSMP---IQANAVQWMSLLGACKTHGDLKRG 486



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 141/312 (45%), Gaps = 35/312 (11%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y + G    A + F    SR+   W+  +  + S  G   E L  +  ++  G   
Sbjct: 103 LIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAF-SHNGCHSEALVFFRRMYQSGERP 161

Query: 293 RSRILTIILKLCTKLMAFWL--GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
                ++IL    ++ A  +  G E+H      G   +V +  A+++ YGKC  ++ A  
Sbjct: 162 DRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARA 221

Query: 351 LFSEVS-------------------DLE-----------DDLLWNEIIMVKLRNEKWENA 380
            F E+                    D E           D + WN +I    ++ + + A
Sbjct: 222 AFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQA 281

Query: 381 IKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           + L+R M  ++  A  + T V ++  CA++ A  +G+ IH  V  +  ++NL V N L+ 
Sbjct: 282 LDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVH 341

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY +   L+ A  VF SMK  +  SWN++ISSY   G+ D A  L+ +M+   ++P  +T
Sbjct: 342 MYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVT 401

Query: 500 WNCLLSGHFTHG 511
           +  LLS   +HG
Sbjct: 402 FVGLLSA-CSHG 412



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 124/257 (48%), Gaps = 12/257 (4%)

Query: 685 RESLKFFIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC--LCLKNGFIKDAYVA 741
           RESL   IQ+ +  +++ +    ++L++ CG    +   + +H   L L +   +  ++A
Sbjct: 41  RESLHKSIQLLESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLA 100

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             LI+MY K G L  ARE+F    ++ + +W   +  F+  G   EA++ F  + ++G +
Sbjct: 101 NLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGER 160

Query: 802 PDAITFTALL--AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
           PD +TF+ +L   A   +  +++G +     +    ++P +   + ++ + GK G LD+A
Sbjct: 161 PDRVTFSVILAAIAQMGAAAIDQG-REIHRYARISGLLPNVVVGTAVISMYGKCGRLDDA 219

Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK-LEPCNSANYNLMMNLLAM 918
                 + +K   T W A++ + ++ G     +  +  LF+ +   +S  +N M+   A 
Sbjct: 220 RAAFEELQWKNSVT-WNAMMTNYKLDGR----DREALELFREMHDADSVCWNAMIAAYAQ 274

Query: 919 SNRWEDVERLRHSMDEV 935
             R +    L  SM + 
Sbjct: 275 HGRGKQALDLYRSMHDT 291



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 38/275 (13%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELH----- 286
           ++I  Y + G    A  AF     ++   W++ + +Y+   G  +E LE++ E+H     
Sbjct: 205 AVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYK-LDGRDREALELFREMHDADSV 263

Query: 287 ------------GKGV----IFRSR-----------ILTIILKLCTKLMAFWLGVEVHAS 319
                       G+G     ++RS                ++ +C +L A   G  +HA 
Sbjct: 264 CWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHAR 323

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           +    FD ++ +  AL++ YGKC  ++ A  +F  +  L+D++ WN II     +   + 
Sbjct: 324 VRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK-LKDEISWNTIISSYAYHGHSDQ 382

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN--CL 437
           A+ L++EM     K    T V +L AC+  G   +G   + Y ++       SV +  C+
Sbjct: 383 ALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD-YFYRMQDDHRIKPSVPHFGCI 441

Query: 438 ISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           I +  R  +L  A  V  SM    N   W S++ +
Sbjct: 442 IDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGA 476


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700;
            AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 229/791 (28%), Positives = 388/791 (49%), Gaps = 66/791 (8%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA +I  GF  D+ L   L         +  A  +F  V    D  L+N ++     N
Sbjct: 38   QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR-PDVFLFNVLMRGFSVN 96

Query: 375  EKWENAIKLFREMQFSS-AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
            E   +++ +F  ++ S+  K  S T    + A +       G+ IHG  +    +S L +
Sbjct: 97   ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156

Query: 434  CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
             + ++ MY +  ++E A +VFD M                                    
Sbjct: 157  GSNIVKMYFKFWRVEDARKVFDRMP----------------------------------- 181

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGR 552
            + D I WN ++SG+  +  Y   + + R + +    R + +++  +L AV EL+ L+ G 
Sbjct: 182  EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGM 241

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC--- 609
            + H    + G     YV T  + +Y K   ++    +F   +  +IVA+N++I GY    
Sbjct: 242  QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301

Query: 610  --------FKGLFVNAKKM-----------------LNQMEEEEIKPDLVSWNSLVSGYS 644
                    FK L ++  ++                 +  +    +K + +S  S+ +  +
Sbjct: 302  ETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALT 361

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                    +     + +     ++ +W ++ISG  QN    +++  F +MQ+ +  PN  
Sbjct: 362  TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T++ +L  C  LG L  GK +H L     F    YV+T LI MY+K G++  AR +F   
Sbjct: 422  TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K   +WN MI G+ ++G G+EA+ +F+E+L +G  P  +TF  +L AC ++GLV+EG 
Sbjct: 482  TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            + F+SM   Y   P+++HY+CMVD+LG+AG+L  A  FI  M  +P +++W  LLG+CRI
Sbjct: 542  EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H     A   S +LF+L+P N   + L+ N+ +    +     +R +  +  +     ++
Sbjct: 602  HKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYT 661

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
             I+I +  HVF++    HP   EIY +L  L  +M++ GY P+T     D++EEE+  ++
Sbjct: 662  LIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMV 721

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+E+LAI +GL+ T+    IR+IKN RVC DCHT  K +S +  R I +RD  RFHHF
Sbjct: 722  KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHF 781

Query: 1065 REGECSCNDCW 1075
            ++G CSC D W
Sbjct: 782  KDGVCSCGDYW 792



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 232/501 (46%), Gaps = 67/501 (13%)

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           S+L+  +  I ++   N + L T++   + D               LG +  A  +F  +
Sbjct: 34  SHLAQTHAQIILHGFRNDISLLTKLTQRLSD---------------LGAIYYARDIFLSV 78

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRL 547
                +PD+  +N L+ G   + S  + L++   + +S   +PN S+ +  + A +  R 
Sbjct: 79  Q----RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRD 134

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            + GR  HG  + +G D +L +G++++ MY K   +++A++VFD M  ++ + WN++ISG
Sbjct: 135 DRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG 194

Query: 608 YCFKGLFVNAKKMLNQMEEE-----------EIKPDLVSWNSL----------------- 639
           Y    ++V + ++   +  E           +I P +     L                 
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254

Query: 640 --------VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
                   +S YS  G+ K    +    +     P++V + ++I G   N     SL  F
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFRK----PDIVAYNAMIHGYTSNGETELSLSLF 310

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
            ++     +  S+T+ SL+   G L L+     IH  CLK+ F+  A V+T L  +YSK 
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKL 367

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
             ++SAR++F +S  K+L SWN MI G+   G  ++AI LF E+ ++ F P+ +T T +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427

Query: 812 AACKNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
           +AC   G +  G W +    STD+    +I   + ++ +  K G + EA      M  K 
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFE--SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485

Query: 871 DATIWGALLGSCRIHGHLEYA 891
           + T W  ++    +HG  + A
Sbjct: 486 EVT-WNTMISGYGLHGQGQEA 505



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 245/552 (44%), Gaps = 50/552 (9%)

Query: 166 SITNSPTSLALPPTDTLAKQAQLSCISSGFCF-LNETNKFRCLSSVKSKHAQMIKMGKIW 224
           S+  SP S +L     L K   L   SS + F ++  + FR   + +  H Q +  G   
Sbjct: 94  SVNESPHS-SLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG--C 150

Query: 225 NSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
           +S+ ++ S ++  Y +F     A K F     +    W++ +  Y      V E ++V+ 
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV-ESIQVFR 209

Query: 284 ELHGKGVI-FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
           +L  +      +  L  IL    +L    LG+++H+   K G     ++    ++ Y KC
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269

Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
             ++  + LF E     D + +N +I     N + E ++ LF+E+  S A+  S T+V +
Sbjct: 270 GKIKMGSALFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           +     +   +    IHGY LKS   S+ SV   L ++YS+ N++E A ++FD   + +L
Sbjct: 329 VPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            SWN+MIS YT  G  + A SLF +M  S   P+ +T  C+LS                 
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS----------------- 428

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                             A  +L  L  G+  H  +     +  +YV T+L+ MY K   
Sbjct: 429 ------------------ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           +  A+ +FD M  +N V WN++ISGY   G    A  +  +M    I P  V++  ++  
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530

Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S  G  KE   I + M +  G  P+V  +  ++    +  + + +L+F   M    I+P
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS---IEP 587

Query: 702 NSTTMSSLLQTC 713
            S+   +LL  C
Sbjct: 588 GSSVWETLLGAC 599


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 248/763 (32%), Positives = 377/763 (49%), Gaps = 99/763 (12%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAI----SRTIVKMLQACAKVGAFHEGKQIH 419
            WN +I V   N   E +  L  EM   +          T+V +L  CA+      GK +H
Sbjct: 6    WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65

Query: 420  GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            G+ +K  L+  L + N L+ MYS+   +  A  +F                         
Sbjct: 66   GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF------------------------- 100

Query: 480  VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                   KMN+++   ++++WN ++ G    G       +LR M + G       V++ L
Sbjct: 101  -------KMNNNK---NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI-L 149

Query: 540  QAVT---ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             AV        L   +E H Y L+    Y+  V  + +  Y K   L  AQ VF  ++++
Sbjct: 150  NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 209

Query: 597  NIVAWNSLISGYC----------------FKGLFVNA-------------------KKML 621
             + +WN+LI G+                   GL  ++                   K++ 
Sbjct: 210  TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 269

Query: 622  NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
              +    ++ DL  + S++S Y   G+      +   M++     ++V+W ++I+G LQN
Sbjct: 270  GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK----SLVSWNTVITGYLQN 325

Query: 682  ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
                 +L  F QM    I+    +M  +   C  L  L+ G+E H   LK+    DA++A
Sbjct: 326  GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 385

Query: 742  TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
              LIDMY+K+G++  + +VF     K+ ASWN MIMG+ I+G  KEAI LF E+  TG  
Sbjct: 386  CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 445

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            PD +TF  +L AC +SGL+ EG +Y D M + + + P ++HY+C++D+LG+AG LD+A  
Sbjct: 446  PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 505

Query: 862  FI-RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
             +   M  + D  IW +LL SCRIH +LE  E  + +LF+LEP    NY L+ NL A   
Sbjct: 506  VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 565

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS--- 977
            +WEDV ++R  M+E+ ++     SWI++++ V  F          GE + + +  +    
Sbjct: 566  KWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF--------VVGERFLDGFEEIKSLW 617

Query: 978  ---EMK--KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
               EMK  K+GY PDT  V  D+ EEEK + L  H+EKLA+ YGL+KT     IRV KN 
Sbjct: 618  SILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNL 677

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH AAK +S V  REI +RD  RFHHF+ G CSC D W
Sbjct: 678  RICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 134/574 (23%), Positives = 241/574 (41%), Gaps = 87/574 (15%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGEL---HGKGVIFRS-RILTIILKLCTKLMAFW 311
           R++  W+S +  + S  G  +E   + GE+   +G G        L  +L +C +     
Sbjct: 1   RNFVSWNSMIRVF-SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 59

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG  VH   +K   D ++ L  ALM+ Y KC  + +A  +F ++++ ++ + WN ++   
Sbjct: 60  LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGF 118

Query: 372 LRNEKWENAIKLFREMQFSS--AKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLK 424
                      + R+M       KA   TI+  +  C     FHE      K++H Y LK
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC-----FHESFLPSLKELHCYSLK 173

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
                N  V N  ++ Y++   L  A RVF  ++   ++SWN++I  +            
Sbjct: 174 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA----------- 222

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
             + N  R+  D          H               M+  G  P+  +V  +L A ++
Sbjct: 223 --QSNDPRLSLD---------AHLQ-------------MKISGLLPDSFTVCSLLSACSK 258

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
           L+ L+ G+E HG+I+RN L+ DL+V  S++ +Y+    L   Q +FD M+++++V+WN++
Sbjct: 259 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 318

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIH-- 657
           I+GY   G    A  +  QM    I+   +S   +    S+      G+   A  + H  
Sbjct: 319 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 378

Query: 658 -------------HMKNSGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQ 693
                        + KN  I             +  +W ++I G   +   +E++K F +
Sbjct: 379 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 438

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           MQ+    P+  T   +L  C   GL+  G + +  +    G   +      +IDM  ++G
Sbjct: 439 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 498

Query: 753 NLKSAREVFRK--SANKTLASWNCMIMGFAIYGN 784
            L  A  V  +  S    +  W  ++    I+ N
Sbjct: 499 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN 532



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 161/331 (48%), Gaps = 14/331 (4%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L S+K  H   +K   ++N + +  + +  Y + G  + A + F    S++   W++ + 
Sbjct: 161 LPSLKELHCYSLKQEFVYN-ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI- 218

Query: 267 DYESFGGEVQE-----LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
                GG  Q       L+   ++   G++  S  +  +L  C+KL +  LG EVH  +I
Sbjct: 219 -----GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 273

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           +   + D+ +  ++++ Y  C ++ +   LF  + D +  + WN +I   L+N   + A+
Sbjct: 274 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVITGYLQNGFPDRAL 332

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            +FR+M     +    +++ +  AC+ + +   G++ H Y LK  LE +  +   LI MY
Sbjct: 333 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 392

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           ++N  +  +++VF+ +K+ + +SWN+MI  Y   G    A  LF +M  +   PD +T+ 
Sbjct: 393 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 452

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPN 531
            +L+     G     L  L  M+ S G +PN
Sbjct: 453 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 483



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 6/154 (3%)

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQED----IKPNSTTMSSLLQTCGGLGLLQNG 722
           N V+W S+I     N    ES     +M +E+      P+  T+ ++L  C     +  G
Sbjct: 2   NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           K +H   +K    K+  +   L+DMYSK G + +A+ +F+ + NK + SWN M+ GF+  
Sbjct: 62  KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121

Query: 783 GNGKEAILLFHELLETG--FQPDAITFTALLAAC 814
           G+      +  ++L  G   + D +T    +  C
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 155


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
            mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
            mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/572 (36%), Positives = 315/572 (55%), Gaps = 45/572 (7%)

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +V  AV + RL+      H ++  NG +   ++  +L++MYVK   L  A+ +FD M +R
Sbjct: 27   LVRGAVQQARLV------HEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDR 80

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS------------------ 638
            N+V+W ++IS Y    L   A   L  M  E ++P++ +++S                  
Sbjct: 81   NVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHGSI 140

Query: 639  --------------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                          L+  YS  G+  +AL + + M    I  ++V W S+I G  QN + 
Sbjct: 141  LKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM----ITGDLVVWNSIIGGFAQNSDG 196

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             E+L  + +M++ D   + +T++S+L+ C GL LL+ G+++H   LK  + +D  +   L
Sbjct: 197  DETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNAL 254

Query: 745  IDMYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            +DMY K G+L+ A  +F R    K + SW+ MI G A  G   +A+ LF  +   G +P+
Sbjct: 255  LDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPN 314

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             IT   +L AC ++GLV +GW YF SM   + I P  EHY C++DLLG+AG LDEA   I
Sbjct: 315  YITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLI 374

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              M  +PDA  W  LLG+CR+H +++ A  A++ + KL+P ++  Y L+ N+ A S +WE
Sbjct: 375  HEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWE 434

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            DV  +R  M   GVK     SWI++ + VH F      HP   EI  EL  L+  + +LG
Sbjct: 435  DVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLG 494

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            YVPDT  V QD++ E+    L  H+EKLAIV+GLM   ++  I + KN R+C DCH  AK
Sbjct: 495  YVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAK 554

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +S +  R I +RD  R+HHFR G CSC D W
Sbjct: 555  LVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 197/468 (42%), Gaps = 107/468 (22%)

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           +K    M  +   A + T  ++++ C   GA  + + +H +V  +  E    + N LI+M
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y +   L+ A  +FD M D N+ SW +MIS+Y+                           
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYS--------------------------- 93

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
               + +  H +   ++ +LR     G RPN  + S VL+A   L  L   R+ HG IL+
Sbjct: 94  ----NSNLNHKALDFLILMLRE----GVRPNMYTYSSVLRACDGLLNL---RQLHGSILK 142

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC----------- 609
            GL+ D++V ++L+D Y K     +A  VF+ M   ++V WNS+I G+            
Sbjct: 143 VGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHL 202

Query: 610 FKGL----FVNAKKMLN----------------QMEEEEIK--PDLVSWNSLVSGYSIWG 647
           +K +    FV  +  L                 Q+    +K   DL+  N+L+  Y   G
Sbjct: 203 YKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCG 262

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             ++A ++   M       +V++W+++I+G  QN    ++LK F  M+ +  KPN  T+ 
Sbjct: 263 SLEDANLLFTRMMTE---KDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITIL 319

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
            +L  C   GL+ +G                                +S +E F     +
Sbjct: 320 GVLFACSHAGLVNDGWYY----------------------------FQSMKEHFGIDPGR 351

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
               + C+I      G   EA+ L HE+     +PDA+T+  LL AC+
Sbjct: 352 E--HYGCIIDLLGRAGKLDEAVKLIHEM---NHEPDAVTWRILLGACR 394



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 176/416 (42%), Gaps = 46/416 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ++K C    A      VH  +   G++    L   L+N Y K   ++ A  LF E+ D  
Sbjct: 22  LIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPD-R 80

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +I     +     A+     M     +    T   +L+AC  +      +Q+H
Sbjct: 81  NVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---RQLH 137

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G +LK  LES++ V + LI  YS+  +   A  VF+ M   +L  WNS+I  +       
Sbjct: 138 GSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFA------ 191

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                                         +      L L + M+   F  + S+++ VL
Sbjct: 192 -----------------------------QNSDGDETLHLYKRMKRADFVADQSTLTSVL 222

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN-MKNRNI 598
           +A T L LL+ GR+ H ++L+   D DL +  +L+DMY K   L++A  +F   M  +++
Sbjct: 223 RACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDV 280

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           ++W+++I+G    G   +A K+   M+ +  KP+ ++   ++   S  G   +       
Sbjct: 281 ISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQS 340

Query: 659 MKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           MK   GI P    +  +I    +     E++K   +M  E   P++ T   LL  C
Sbjct: 341 MKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHE---PDAVTWRILLGAC 393



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 8/272 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           ++ +LI  Y++FG    A   F     R+   W++ +  Y S      + L+    +  +
Sbjct: 53  LINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAY-SNSNLNHKALDFLILMLRE 111

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           GV       + +L+ C  L+      ++H S++K G + DV ++ AL++ Y K  +   A
Sbjct: 112 GVRPNMYTYSSVLRACDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDA 168

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F+E+    D ++WN II    +N   +  + L++ M+ +   A   T+  +L+AC  
Sbjct: 169 LNVFNEMIT-GDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTG 227

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS-MKDHNLSSWNS 467
           +     G+Q+H +VLK   + +L + N L+ MY +   LE A  +F   M + ++ SW++
Sbjct: 228 LALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWST 285

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MI+     G+   A  LF  M S   +P+ IT
Sbjct: 286 MIAGLAQNGFSADALKLFEAMKSKGPKPNYIT 317



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 153/333 (45%), Gaps = 19/333 (5%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L +++  H  ++K+G    SD  V+S LI  Y + G+   A   F    +     W+S +
Sbjct: 130 LLNLRQLHGSILKVG--LESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSII 187

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             +     +  E L ++  +     +     LT +L+ CT L    LG +VH  ++K  +
Sbjct: 188 GGFAQ-NSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--Y 244

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           D D+ L  AL++ Y KC  +E AN LF+ +   +D + W+ +I    +N    +A+KLF 
Sbjct: 245 DQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFE 304

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-----ALESNLSVCNCLISM 440
            M+    K    TI+ +L AC+  G  ++G     Y  +S      ++       C+I +
Sbjct: 305 AMKSKGPKPNYITILGVLFACSHAGLVNDG----WYYFQSMKEHFGIDPGREHYGCIIDL 360

Query: 441 YSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP-DII 498
             R  KL+ A ++   M  + +  +W  ++ +      VD+A  ++      ++ P D  
Sbjct: 361 LGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLA--IYAAKEILKLDPADAG 418

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           T+  L + +     +++V  + R M++ G + +
Sbjct: 419 TYILLSNIYANSQKWEDVAEVRRKMRTRGVKKD 451



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 5/193 (2%)

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           +K    M +  +  ++ T S L++ C   G +Q  + +H     NG+    ++   LI+M
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           Y K G L  AR +F +  ++ + SW  MI  ++      +A+     +L  G +P+  T+
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
           +++L AC   GL+    +          +   +   S ++D   K G   +A +    M 
Sbjct: 121 SSVLRAC--DGLL--NLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM- 175

Query: 868 FKPDATIWGALLG 880
              D  +W +++G
Sbjct: 176 ITGDLVVWNSIIG 188


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/707 (30%), Positives = 368/707 (52%), Gaps = 77/707 (10%)

Query: 406  CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            C++ G    G+ +H   +   L S + V N L+SMYS+  ++  A RVFD  ++ +  SW
Sbjct: 119  CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            NS++S Y   G  +    +F  M                      G   N   L   ++ 
Sbjct: 179  NSLVSGYVRAGAREEMVRVFAMMRRG-------------------GMGLNSFALGSVIKC 219

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
               R +G+              +      HG +++ GLD D+++ ++++DMY K   L  
Sbjct: 220  CSGRGDGT--------------MDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVE 265

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCF------KGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
            A  +F +++  N+V +N++I+G+C       K +   A  + ++++   ++P   +++S+
Sbjct: 266  AAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSV 325

Query: 640  -----VSGYSIWGQSKEALVIIHHMK--------------NSGIYP------------NV 668
                 ++GY  +G+     VI +  +              NSG               ++
Sbjct: 326  LRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDI 385

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            VTWT+++SG +QNE + ++L  F +     +KP+  T+SS++  C  L + + G++I C 
Sbjct: 386  VTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCF 445

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
              K+GF +   +    + MY++SG++ +A   F++  +  + SW+ +I   A +G  ++A
Sbjct: 446  ATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDA 505

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +  F E+++    P+ ITF  +L AC + GLV+EG +Y+++M+ DY + PTI+H +C+VD
Sbjct: 506  LHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVD 565

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG L +A  FI    F  D  IW +LL SCRIH  LE  ++ + R+ +LEP +SA+
Sbjct: 566  LLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSAS 625

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y ++ N+   +       + R  M + GVK     SWI++   VH F A    HP +  I
Sbjct: 626  YVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAI 685

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y +L  ++S ++KL    DT     +I + E+  ++  H+EKLA+  G++     APIRV
Sbjct: 686  YTKLEEMLSRIEKLA-TTDT-----EISKREQ-NLMNCHSEKLAVALGMIHLPQSAPIRV 738

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +KN RVC DCH+  K +S    REI LRD  RFHHFR+G CSC D W
Sbjct: 739  MKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 115/537 (21%), Positives = 234/537 (43%), Gaps = 81/537 (15%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C++      G  VHA  I  G    V +  +L++ Y KC ++  A ++F +V++  DD+ 
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF-DVAEERDDVS 177

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG--AFHEGKQIHGY 421
           WN ++   +R    E  +++F  M+       S  +  +++ C+  G       + +HG 
Sbjct: 178 WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGC 237

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY------TGL 475
           V+K+ L+S++ + + +I MY++   L  A  +F S+++ N+  +N+MI+ +       G 
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGK 297

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                A +L++++ S                              RGMQ     P   + 
Sbjct: 298 EVASEALTLYSEVQS------------------------------RGMQ-----PTEFTF 322

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           S VL+A      L++G++ HG +++     D ++G++L+D+Y  + C+++    F +   
Sbjct: 323 SSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPK 382

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            +IV W +++SG     L   A  + ++     +KPDL + +S+++  +    ++    I
Sbjct: 383 HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442

Query: 656 -------------------IHHMKNSGIYP------------NVVTWTSLISGSLQNENY 684
                              +H    SG               +VV+W+++IS   Q+   
Sbjct: 443 QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCA 502

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVATG 743
           R++L FF +M    + PN  T   +L  C   GL+  G   +    K+ G        T 
Sbjct: 503 RDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTC 562

Query: 744 LIDMYSKSGNLKSAREVFRKS---ANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           ++D+  ++G L  A      S   A+  +  W  ++    I+ + +   L+ + ++E
Sbjct: 563 VVDLLGRAGRLADAEAFISNSIFHADPVI--WRSLLASCRIHRDLERGQLVANRIME 617



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 200/497 (40%), Gaps = 88/497 (17%)

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L++ Y R      A R+ D M   N  S+N +I +Y+  G   ++     +   + + 
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106

Query: 495 PDIITW-----NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
            D  ++      C  +GH   G   + L +L                             
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAIL----------------------------- 137

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
                      +GL   ++V  SL+ MY K   +  A+ VFD  + R+ V+WNSL+SGY 
Sbjct: 138 -----------DGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYV 186

Query: 610 FKGL---FVNAKKMLNQ------------------------MEEEE------IKPDLVSW 636
             G     V    M+ +                        M+  E      IK  L S 
Sbjct: 187 RAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSD 246

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY------RESLKF 690
             LVS        K ALV    +  S   PNVV + ++I+G  + E         E+L  
Sbjct: 247 VFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTL 306

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
           + ++Q   ++P   T SS+L+ C   G L+ GK+IH   +K  F +D ++ + LID+Y  
Sbjct: 307 YSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFN 366

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
           SG ++     FR S    + +W  M+ G       ++A+ LFHE L  G +PD  T +++
Sbjct: 367 SGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSV 426

Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIP-TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           + AC +  +   G +     +T       T+   SC V +  ++G +D A    + M   
Sbjct: 427 MNACASLAVARAG-EQIQCFATKSGFDRFTVMGNSC-VHMYARSGDVDAATRRFQEME-S 483

Query: 870 PDATIWGALLGSCRIHG 886
            D   W A++     HG
Sbjct: 484 HDVVSWSAVISCHAQHG 500



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 199/453 (43%), Gaps = 46/453 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G+   A + F +   R    W+S +  Y   G   +E++ V+  +   G+ 
Sbjct: 149 SLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAR-EEMVRVFAMMRRGGMG 207

Query: 292 FRSRILTIILKLCTKLMAFWLGV--EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
             S  L  ++K C+      + +   VH  +IK G D DV L  A+++ Y K   +  A 
Sbjct: 208 LNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAA 267

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEK------WENAIKLFREMQFSSAKAISRTIVKML 403
            LF  V +  + +++N +I    R E          A+ L+ E+Q    +    T   +L
Sbjct: 268 ALFRSVQE-PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVL 326

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +AC   G    GKQIHG V+K   + +  + + LI +Y  +  +E   R F S   H++ 
Sbjct: 327 RACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIV 386

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +W +M+S        + A SLF++   + ++PD+ T                        
Sbjct: 387 TWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFT------------------------ 422

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                      +S V+ A   L + + G +   +  ++G D    +G S + MY ++  +
Sbjct: 423 -----------ISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDV 471

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             A   F  M++ ++V+W+++IS +   G   +A    ++M + ++ P+ +++  +++  
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 644 SIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLI 675
           S  G   E L     M K+ G+ P +   T ++
Sbjct: 532 SHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVV 564



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 49/359 (13%)

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           L++  +L+  Y +      A+ + D M  RN V++N LI  Y  +GL   + + L +   
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 627 EEIKPDLVSW-----------------------------------NSLVSGYSIWGQSKE 651
             +  D  S+                                   NSLVS YS  G+  E
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           A  +    +      + V+W SL+SG ++     E ++ F  M++  +  NS  + S+++
Sbjct: 163 ARRVFDVAEER----DDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218

Query: 712 TCGGL--GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            C G   G +   + +H   +K G   D ++ + +IDMY+K G L  A  +FR      +
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNV 278

Query: 770 ASWNCMIMGF----AIYGN--GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
             +N MI GF     + G     EA+ L+ E+   G QP   TF+++L AC  +G +E G
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            K        Y         S ++DL   +G +++ +   R+ P K D   W A++  C
Sbjct: 339 -KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 16/307 (5%)

Query: 214 HAQMIKMGKIWNSDD-MVKSLIFHYLEFGDFTSAAKAF-------FLYFSRSYADWSSFL 265
           H  +IK G   +SD  +V ++I  Y + G    AA  F        + F+   A    F 
Sbjct: 235 HGCVIKAG--LDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIA---GFC 289

Query: 266 EDYESFGGEV-QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
                 G EV  E L ++ E+  +G+       + +L+ C        G ++H  +IK  
Sbjct: 290 RTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYT 349

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F  D  +  AL++ Y     +E   + F   S   D + W  ++   ++NE  E A+ LF
Sbjct: 350 FQEDDFIGSALIDLYFNSGCMEDGFRCFRS-SPKHDIVTWTAMVSGCVQNELHEKALSLF 408

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            E   +  K    TI  ++ ACA +     G+QI  +  KS  +    + N  + MY+R+
Sbjct: 409 HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARS 468

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             ++ ATR F  M+ H++ SW+++IS +   G    A   F++M  +++ P+ IT+  +L
Sbjct: 469 GDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528

Query: 505 SGHFTHG 511
           +   +HG
Sbjct: 529 TA-CSHG 534



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/334 (20%), Positives = 136/334 (40%), Gaps = 72/334 (21%)

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
           N+L++ YC  G  + A+++L++M     + + VS+N L+  YS  G +  +L  +   + 
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEMP----RRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
           +G+  +  ++ + +                                     C   G L+ 
Sbjct: 103 AGVDVDRFSYAAAL-----------------------------------AACSRAGHLRA 127

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           G+ +H L + +G     +V+  L+ MYSK G +  AR VF  +  +   SWN ++ G+  
Sbjct: 128 GRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVR 187

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG-----LVE--EGWKYFDSMSTDY 834
            G  +E + +F  +   G   ++    +++  C   G     + E   G      + +D 
Sbjct: 188 AGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDV 247

Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL-GSCRIHGHLE---- 889
            ++      S M+D+  K G L EA    R++  +P+  ++  ++ G CR    +     
Sbjct: 248 FLV------SAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNTMIAGFCRTETVIGKEVA 300

Query: 890 ------YAEIASRRLFK--------LEPCNSANY 909
                 Y+E+ SR +          L  CN A Y
Sbjct: 301 SEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGY 334


>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
          Length = 669

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/543 (34%), Positives = 318/543 (58%), Gaps = 3/543 (0%)

Query: 524  QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
            Q  G  P    + V  ++      L  GR+ H    R GLD +++V  S + MY +    
Sbjct: 4    QGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRP 63

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI-KPDLVSWNSLVSG 642
             +A ++F+ M+ R++V+WN++ISG+   GLF  A  +  ++   +  KPD  +  S++  
Sbjct: 64   DDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILP- 122

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
             S+     E + ++  + +   +  +++W ++++    NE + E+++ F++MQ++ I+P+
Sbjct: 123  -SMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPD 181

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
            + T++++L +CG +  L  GK IH +  +        +   L+DMY+  G LK AR+VF 
Sbjct: 182  AVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFD 241

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
                + + SW  +I  +  +G+G+EAI LF ++   G +PD+I F A+LAAC ++GL++ 
Sbjct: 242  SMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDM 301

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G  YF SM+++++I P +EHY+CMVDLLG+AG + EA+DFI  MP KP+  +WGALLG+C
Sbjct: 302  GKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGAC 361

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIH +++   +A+  L +L P  +  Y L+ N+ A + RW DV  +R  M+  G+K +  
Sbjct: 362  RIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPG 421

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             S  ++   VH F      HP +  IY +L  L+  ++++GY P+      D++EE+K  
Sbjct: 422  VSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEG 481

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLAI + L+ T    PIR+  N R CSDCH AAK +S + GREI L+D  R H
Sbjct: 482  HLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIH 541

Query: 1063 HFR 1065
            + +
Sbjct: 542  YMK 544



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 157/346 (45%), Gaps = 38/346 (10%)

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            ++CA       G+QIH    +  L+ N+ V +  ISMY+R  + + A ++F+ M+  ++
Sbjct: 19  FKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDV 78

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNK--------------------MNSSRIQ-------- 494
            SWN+MIS +   G    A  +F +                    M  +R++        
Sbjct: 79  VSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGV 138

Query: 495 ------PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
                   +I+WN +L+ +  +  +   + L   MQ  G  P+  +++ VL +  E+  L
Sbjct: 139 FDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSAL 198

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
             G+  H  I R  +   + +  +LMDMY    CL+ A++VFD+M  R++V+W S+IS Y
Sbjct: 199 SLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAY 258

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPN 667
              G    A  +  +M  + ++PD +++ ++++  S  G         + M +   I P 
Sbjct: 259 GRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPK 318

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +  +  ++    +    RE+  F + M    IKPN     +LL  C
Sbjct: 319 LEHYACMVDLLGRAGCIREAYDFIMVMP---IKPNERVWGALLGAC 361



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 15/205 (7%)

Query: 316 VHASLIKRGFDF---DVHLKC---------ALMNFYGKCR--DVESANKLFSEVSDLEDD 361
            HA L  R  D     V L+C         +++   GK R  D+     +F E+   +  
Sbjct: 89  AHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMR-FKGL 147

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           + WN ++ V   NE    A++LF  MQ    +  + T+  +L +C +V A   GK+IH  
Sbjct: 148 ISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEV 207

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           + +  + S++ + N L+ MY+    L+ A  VFDSM   ++ SW S+IS+Y   G+   A
Sbjct: 208 IKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREA 267

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSG 506
             LF KM    ++PD I +  +L+ 
Sbjct: 268 IDLFEKMCGQGLEPDSIAFVAILAA 292



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 9/273 (3%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ L  Y +    V E +E++  +   G+   +  L  +L  C ++ A  LG  +H  +
Sbjct: 150 WNAMLAVYTNNEMHV-EAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVI 208

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            +R     + L+ ALM+ Y  C  ++ A  +F  +    D + W  II    R+     A
Sbjct: 209 KRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGT-RDVVSWTSIISAYGRHGHGREA 267

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESNLSVCNCLI 438
           I LF +M     +  S   V +L AC+  G    GK  + Y + S   +   L    C++
Sbjct: 268 IDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKH-YFYSMTSEFHIAPKLEHYACMV 326

Query: 439 SMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
            +  R   +  A      M    N   W +++ +      +D+   L    +  R+ P  
Sbjct: 327 DLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIG--LLAADSLLRLAPKQ 384

Query: 498 ITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFR 529
             +  LLS  +   G + +V  +   M+S G +
Sbjct: 385 TGYYVLLSNIYARAGRWADVSMVRSVMESKGIK 417


>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
 gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/676 (33%), Positives = 339/676 (50%), Gaps = 104/676 (15%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +L AC    + H G +I   +L + +L  N  + + LI+++S   +L+LA ++FD + D 
Sbjct: 137  LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            +L                     L  K+           W  +  G+  +GS ++ L + 
Sbjct: 197  SL---------------------LTEKV-----------WAAMAIGYSRNGSPRDALIVY 224

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
              M      P   S+SV L+A  +L+ L+ GR  H  I++                    
Sbjct: 225  VDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKR------------------- 265

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
                  +E  D       V +N L+  Y   GLF +A+K+ + M E              
Sbjct: 266  ------KEKVDQ------VVYNVLLKLYMESGLFDDARKVFDGMSER------------- 300

Query: 641  SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
                                      NVVTW SLIS   +     E    F +MQ+E I 
Sbjct: 301  --------------------------NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIG 334

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
             +  T++++L  C  +  L  GKEIH   LK+    D  +   L+DMY K G ++ +R V
Sbjct: 335  FSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394

Query: 761  FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
            F     K LASWN M+  +AI GN +E I LF  ++E+G  PD ITF ALL+ C ++GL 
Sbjct: 395  FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454

Query: 821  EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            E G   F+ M T++ + P +EHY+C+VD+LG+AG + EA   I TMPFKP A+IWG+LL 
Sbjct: 455  EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
            SCR+HG++   EIA++ LF LEP N  NY ++ N+ A +  W++V+++R  M + GVK  
Sbjct: 515  SCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKE 574

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE-MKKLGYVPDTRCVYQDIDEEE 999
               SW+Q+   + +F A G       + Y +++  + E ++K GY P+T  V  D+DEE 
Sbjct: 575  AGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEET 634

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K   +  H+E+LA  Y L+ T    PIR+ KN RVC+DCH+  K +S V  R I LRD  
Sbjct: 635  KANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTK 694

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF +G CSC D W
Sbjct: 695  RFHHFVDGICSCKDYW 710



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 177/382 (46%), Gaps = 41/382 (10%)

Query: 335 LMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           L+  +  CR ++ A K+F +V+D  L  + +W  + +   RN    +A+ ++ +M  S  
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +  + +I   L+AC  +     G+ IH  ++K   + +  V N L+ +Y  +   + A +
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VFD M + N+ +WNS+IS  +    V   ++LF KM    I                   
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI------------------- 333

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                         GF  + ++++ +L A + +  L  G+E H  IL++    D+ +  S
Sbjct: 334 --------------GF--SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS 377

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           LMDMY K   ++ ++ VFD M  +++ +WN +++ Y   G       +   M E  + PD
Sbjct: 378 LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD 437

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFF 691
            +++ +L+SG S  G ++  L +   MK    + P +  +  L+    +    +E++K  
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVI 497

Query: 692 IQMQQEDIKPNSTTMSSLLQTC 713
             M     KP+++   SLL +C
Sbjct: 498 ETMP---FKPSASIWGSLLNSC 516



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 1/229 (0%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           +++ LK C  L    +G  +HA ++KR    D  +   L+  Y +    + A K+F  +S
Sbjct: 239 ISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS 298

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  + + WN +I V  +  +      LFR+MQ         T+  +L AC++V A   GK
Sbjct: 299 E-RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGK 357

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IH  +LKS  + ++ + N L+ MY +  ++E + RVFD M   +L+SWN M++ Y   G
Sbjct: 358 EIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAING 417

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            ++   +LF  M  S + PD IT+  LLSG    G  +  L+L   M++
Sbjct: 418 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKT 466



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 15/275 (5%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HAQ++K  +    D +V +++   Y+E G F  A K F     R+   W+S +    S  
Sbjct: 259 HAQIVKRKE--KVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLIS-VLSKK 315

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             V E+  ++ ++  + + F    LT IL  C+++ A   G E+HA ++K     DV L 
Sbjct: 316 VRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 375

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +LM+ YGKC +VE + ++F +V   +D   WN ++     N   E  I LF  M  S  
Sbjct: 376 NSLMDMYGKCGEVEYSRRVF-DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434

Query: 393 KAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                T V +L  C+  G    G     +    + +  ALE       CL+ +  R  K+
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHY----ACLVDILGRAGKI 490

Query: 448 ELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
           + A +V ++M    + S W S+++S    G V V 
Sbjct: 491 KEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVG 525


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/572 (36%), Positives = 323/572 (56%), Gaps = 34/572 (5%)

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             +L+  T L  L  G+  H  +L +    DL +  +L+++Y K   L  A+++FD M +R
Sbjct: 20   TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS-------IWGQS 649
            ++V W +LI+GY       +A  +L +M    +KP+  +  SL+   S       + G+ 
Sbjct: 80   DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 650  KEALVI--------------------IHHMKNSG------IYPNVVTWTSLISGSLQNEN 683
               L +                     HH++ +       +  N V+W +LI+G  +   
Sbjct: 140  LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              ++   F  M +E++KP   T SS+L  C  +G L+ GK +H L +K G    A+V   
Sbjct: 200  GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            L+DMY+KSG+++ A++VF + A + + SWN M+ G++ +G GK A+  F E+L T   P+
Sbjct: 260  LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             ITF  +L AC ++GL++EG  YFD M   YN+ P I HY  MVDLLG+AG+LD A  FI
Sbjct: 320  DITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              MP KP A +WGALLG+CR+H ++E    A+  +F+L+      + L+ N+ A++ RW 
Sbjct: 379  SEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            D  ++R  M E GVK     SW++++  VHVF A+   HP   EI+     +  ++K++G
Sbjct: 439  DAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIG 498

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            YVPD+  V   +D++E+   L  H+EKLA+ + L+ T   + IR+ KN R+C DCH+A K
Sbjct: 499  YVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFK 558

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++S +  REI +RD  RFHHF +G CSC D W
Sbjct: 559  FVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 203/420 (48%), Gaps = 41/420 (9%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           I   +LK CT L     G  +HA L+   F  D+ ++  L+N Y KC D+  A KLF E+
Sbjct: 17  ICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEM 76

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH-- 413
           S   D + W  +I    ++++ ++A+ L  EM     K    T+  +L+A + VG+    
Sbjct: 77  SS-RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVL 135

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           +G+Q+HG  L+   +SN+ V   ++ MY+R + LE A  +FD M   N  SWN++I+ Y 
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYA 195

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G  D A+ LF+ M    ++P             TH +Y +VL     M S        
Sbjct: 196 RKGQGDKAFCLFSNMLRENVKP-------------THFTYSSVLCACASMGS-------- 234

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
                         L+ G+  H  +++ G     +VG +L+DMY K+  +++A++VFD +
Sbjct: 235 --------------LEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 280

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
             R++V+WNS+++GY   GL   A +   +M    I P+ +++  +++  S  G   E  
Sbjct: 281 AKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR 340

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                MK   + P +  + +++    +  +   +++F  +M    IKP +    +LL  C
Sbjct: 341 HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMP---IKPTAAVWGALLGAC 397



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 195/430 (45%), Gaps = 74/430 (17%)

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           + A+ I  T++K    C  +   +EGK IH  +L S    +L + N L+++Y++   L  
Sbjct: 12  AGAREICHTLLK---RCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVY 68

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +                               LF++M+S     D++TW  L++G+  
Sbjct: 69  ARK-------------------------------LFDEMSSR----DVVTWTALITGYSQ 93

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA---VTELRLLKYGRESHGYILRNGLDYD 566
           H   Q+ L LL  M  +G +PN  +++ +L+A   V    +L+ GR+ HG  LR G D +
Sbjct: 94  HDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ-GRQLHGLCLRYGYDSN 152

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           +YV  +++DMY +   L+ AQ +FD M ++N V+WN+LI+GY  KG    A  + + M  
Sbjct: 153 VYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLR 212

Query: 627 EEIKPDLVSWNSLVSGYSI----------------WGQSKEALV---IIHHMKNSGIYP- 666
           E +KP   +++S++   +                 WG+   A V   ++     SG    
Sbjct: 213 ENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIED 272

Query: 667 -----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                      +VV+W S+++G  Q+   + +L+ F +M +  I PN  T   +L  C  
Sbjct: 273 AKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSH 332

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNC 774
            GLL  G+    +  K            ++D+  ++G+L  A +   +   K T A W  
Sbjct: 333 AGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGA 392

Query: 775 MIMGFAIYGN 784
           ++    ++ N
Sbjct: 393 LLGACRMHKN 402



 Score =  129 bits (325), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 162/315 (51%), Gaps = 25/315 (7%)

Query: 578 VKNDCLQNA--QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           ++  C  NA  +E+   +  R     N L  G     L +N++           + DLV 
Sbjct: 4   IRQQCKNNAGAREICHTLLKR-CTHLNKLNEGKIIHALLLNSR----------FRDDLVM 52

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            N+L++ Y+  G    A  +   M +     +VVTWT+LI+G  Q++  +++L    +M 
Sbjct: 53  QNTLLNLYAKCGDLVYARKLFDEMSSR----DVVTWTALITGYSQHDRPQDALLLLPEML 108

Query: 696 QEDIKPNSTTMSSLLQTCGGLG---LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           +  +KPN  T++SLL+   G+G   +LQ G+++H LCL+ G+  + YV+  ++DMY++  
Sbjct: 109 RIGLKPNQFTLASLLKAASGVGSTDVLQ-GRQLHGLCLRYGYDSNVYVSCAILDMYARCH 167

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           +L+ A+ +F    +K   SWN +I G+A  G G +A  LF  +L    +P   T++++L 
Sbjct: 168 HLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLC 227

Query: 813 ACKNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
           AC + G +E+G W +   +     ++  +   + ++D+  K+G +++A      +  K D
Sbjct: 228 ACASMGSLEQGKWVHALMIKWGEKLVAFVG--NTLLDMYAKSGSIEDAKKVFDRLA-KRD 284

Query: 872 ATIWGALLGSCRIHG 886
              W ++L     HG
Sbjct: 285 VVSWNSMLTGYSQHG 299



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 146/284 (51%), Gaps = 6/284 (2%)

Query: 227 DDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE 284
           DD+V   +L+  Y + GD   A K F    SR    W++ +  Y S     Q+ L +  E
Sbjct: 48  DDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGY-SQHDRPQDALLLLPE 106

Query: 285 LHGKGVIFRSRILTIILKLCTKLMA--FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
           +   G+      L  +LK  + + +     G ++H   ++ G+D +V++ CA+++ Y +C
Sbjct: 107 MLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARC 166

Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
             +E A  +F +V   ++++ WN +I    R  + + A  LF  M   + K    T   +
Sbjct: 167 HHLEEAQLIF-DVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSV 225

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           L ACA +G+  +GK +H  ++K   +    V N L+ MY+++  +E A +VFD +   ++
Sbjct: 226 LCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDV 285

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            SWNSM++ Y+  G   VA   F +M  +RI P+ IT+ C+L+ 
Sbjct: 286 VSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTA 329


>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
          Length = 717

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/676 (33%), Positives = 339/676 (50%), Gaps = 104/676 (15%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +L AC    + H G +I   +L + +L  N  + + LI+++S   +L+LA ++FD + D 
Sbjct: 144  LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 203

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            +L                     L  K+           W  +  G+  +GS ++ L + 
Sbjct: 204  SL---------------------LTEKV-----------WAAMAIGYSRNGSPRDALIVY 231

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
              M      P   S+SV L+A  +L+ L+ GR  H  I++                    
Sbjct: 232  VDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKR------------------- 272

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
                  +E  D       V +N L+  Y   GLF +A+K+ + M E              
Sbjct: 273  ------KEKVDQ------VVYNVLLKLYMESGLFDDARKVFDGMSER------------- 307

Query: 641  SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
                                      NVVTW SLIS   +     E    F +MQ+E I 
Sbjct: 308  --------------------------NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIG 341

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
             +  T++++L  C  +  L  GKEIH   LK+    D  +   L+DMY K G ++ +R V
Sbjct: 342  FSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 401

Query: 761  FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
            F     K LASWN M+  +AI GN +E I LF  ++E+G  PD ITF ALL+ C ++GL 
Sbjct: 402  FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 461

Query: 821  EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            E G   F+ M T++ + P +EHY+C+VD+LG+AG + EA   I TMPFKP A+IWG+LL 
Sbjct: 462  EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 521

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
            SCR+HG++   EIA++ LF LEP N  NY ++ N+ A +  W++V+++R  M + GVK  
Sbjct: 522  SCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKE 581

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE-MKKLGYVPDTRCVYQDIDEEE 999
               SW+Q+   + +F A G       + Y +++  + E ++K GY P+T  V  D+DEE 
Sbjct: 582  AGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEET 641

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K   +  H+E+LA  Y L+ T    PIR+ KN RVC+DCH+  K +S V  R I LRD  
Sbjct: 642  KANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTK 701

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF +G CSC D W
Sbjct: 702  RFHHFVDGICSCKDYW 717



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 177/382 (46%), Gaps = 41/382 (10%)

Query: 335 LMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           L+  +  CR ++ A K+F +V+D  L  + +W  + +   RN    +A+ ++ +M  S  
Sbjct: 180 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 239

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +  + +I   L+AC  +     G+ IH  ++K   + +  V N L+ +Y  +   + A +
Sbjct: 240 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 299

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VFD M + N+ +WNS+IS  +    V   ++LF KM    I                   
Sbjct: 300 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI------------------- 340

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                         GF  + ++++ +L A + +  L  G+E H  IL++    D+ +  S
Sbjct: 341 --------------GF--SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS 384

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           LMDMY K   ++ ++ VFD M  +++ +WN +++ Y   G       +   M E  + PD
Sbjct: 385 LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD 444

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFF 691
            +++ +L+SG S  G ++  L +   MK    + P +  +  L+    +    +E++K  
Sbjct: 445 GITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVI 504

Query: 692 IQMQQEDIKPNSTTMSSLLQTC 713
             M     KP+++   SLL +C
Sbjct: 505 ETMP---FKPSASIWGSLLNSC 523



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 1/229 (0%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           +++ LK C  L    +G  +HA ++KR    D  +   L+  Y +    + A K+F  +S
Sbjct: 246 ISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS 305

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  + + WN +I V  +  +      LFR+MQ         T+  +L AC++V A   GK
Sbjct: 306 E-RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGK 364

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IH  +LKS  + ++ + N L+ MY +  ++E + RVFD M   +L+SWN M++ Y   G
Sbjct: 365 EIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAING 424

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            ++   +LF  M  S + PD IT+  LLSG    G  +  L+L   M++
Sbjct: 425 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKT 473



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 15/275 (5%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HAQ++K  +    D +V +++   Y+E G F  A K F     R+   W+S +    S  
Sbjct: 266 HAQIVKRKE--KVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLIS-VLSKK 322

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             V E+  ++ ++  + + F    LT IL  C+++ A   G E+HA ++K     DV L 
Sbjct: 323 VRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 382

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +LM+ YGKC +VE + ++F +V   +D   WN ++     N   E  I LF  M  S  
Sbjct: 383 NSLMDMYGKCGEVEYSRRVF-DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 441

Query: 393 KAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                T V +L  C+  G    G     +    + +  ALE       CL+ +  R  K+
Sbjct: 442 APDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHY----ACLVDILGRAGKI 497

Query: 448 ELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
           + A +V ++M    + S W S+++S    G V V 
Sbjct: 498 KEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVG 532


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 622

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/688 (32%), Positives = 355/688 (51%), Gaps = 76/688 (11%)

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
            Q SS    ++T+  +LQ C+ +    E +QIHG +LK+ L                    
Sbjct: 11   QLSSESNAAQTL-HLLQRCSNM---EELRQIHGQMLKTGL-------------------- 46

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
                 + D +    L ++ +  +S    G +  A ++F+++     +P+   WN ++ G+
Sbjct: 47   -----ILDEIPASKLLAFCASPNS----GSLAYARTVFDRI----FRPNTFMWNTMIRGY 93

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                  +  L L   M       N  +   +L+A + +  L+  ++ H +I++ G   ++
Sbjct: 94   SNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEI 153

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            Y   SL+++Y K+  +++A+ +FD +  R                               
Sbjct: 154  YTTNSLLNVYSKSGDIKSARLLFDQVDQR------------------------------- 182

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                D VSWNS++ GY+  G+ + A  I +HM       N+++WTS+ISG +     +E+
Sbjct: 183  ----DTVSWNSMIDGYTKCGEIEMAYEIFNHMPER----NIISWTSMISGCVGAGKPKEA 234

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            L  F +MQ   IK ++  + S LQ C  LG+L  GK IH    K+    D  +   LIDM
Sbjct: 235  LNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDM 294

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y+K G+L+ A EVFRK   K ++ W  MI G+AI+G G+EA+  F ++   G +P+ +TF
Sbjct: 295  YAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTF 354

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
            T +L AC ++GLV E    F+SM   +   P+IEHY CMVDLLG+AG L EA + I  MP
Sbjct: 355  TGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP 414

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
             KP+A IWGALL +C IHG+LE  +   + L +++P +   Y  + ++ A +  W    R
Sbjct: 415  VKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAAR 474

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            +R  M E GV  +   S I ++   H F A    HP   EI   L  +V  +++ GY P 
Sbjct: 475  VRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPK 534

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSL 1047
               +  D++++EK   +  H+EKLA+ +GL+ TK    IR++KN RVC DCHT  K +S 
Sbjct: 535  LGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISK 594

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            V  REI +RD  RFH F++G C+C D W
Sbjct: 595  VYAREILMRDRTRFHLFKDGNCTCGDYW 622



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 206/414 (49%), Gaps = 11/414 (2%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRD--VESANKLFSEVSDLEDDLLWNEIIMVKL 372
           ++H  ++K G   D      L+ F        +  A  +F  +    +  +WN +I    
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR-PNTFMWNTMIRGYS 94

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            +++ E A+ L+  M + S    + T   +L+AC+ + A  E +QIH +++K    S + 
Sbjct: 95  NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIY 154

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
             N L+++YS++  ++ A  +FD +   +  SWNSMI  YT  G +++A+ +FN M    
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMP--- 211

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + +II+W  ++SG    G  +  L L   MQ+ G + +  ++   LQA  +L +L  G+
Sbjct: 212 -ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 270

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H YI ++ ++ D  +G  L+DMY K   L+ A EVF  M+ + +  W ++ISGY   G
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTW 671
               A +   +M+   ++P+ +++  +++  S  G   EA ++   M+   G  P++  +
Sbjct: 331 RGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY 390

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             ++    +    +E+ +    M    +KPN+    +LL  C   G L+ GK+I
Sbjct: 391 GCMVDLLGRAGLLKEAEELIENM---PVKPNAAIWGALLNACHIHGNLELGKQI 441



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 175/401 (43%), Gaps = 35/401 (8%)

Query: 186 AQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIF-HYLEFGDFT 244
           +QLS  S+    L+   +   +  ++  H QM+K G I +     K L F      G   
Sbjct: 10  SQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLA 69

Query: 245 SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
            A   F   F  +   W++ +  Y S   E +E L ++  +    V   +     +LK C
Sbjct: 70  YARTVFDRIFRPNTFMWNTMIRGY-SNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
           + + A     ++HA +IK GF  +++   +L+N Y K  D++SA  LF +V D  D + W
Sbjct: 129 SSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV-DQRDTVSW 187

Query: 365 NEII-----------------MVKLRN--------------EKWENAIKLFREMQFSSAK 393
           N +I                  +  RN               K + A+ LF  MQ +  K
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             +  +V  LQACA +G   +GK IH Y+ K  +E +  +   LI MY++   LE A  V
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F  M++  +S W +MIS Y   G    A   F KM ++ ++P+ +T+  +L+     G  
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLV 367

Query: 514 QNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRE 553
                L   M+ + GF+P+      ++  +    LLK   E
Sbjct: 368 HEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 408


>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Glycine max]
          Length = 611

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/613 (33%), Positives = 331/613 (53%), Gaps = 46/613 (7%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            N+++++Y   G +  A  LF+ +     + D + W  LL+           L++ R + S
Sbjct: 42   NTLLNAYGKCGLIQDALQLFDALP----RRDPVAWASLLTACNLSNRPHRALSISRSLLS 97

Query: 526  LGFRPNGSSVSVVLQAVTELRLL--KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
             GF P+    + +++A   L +L  K G++ H     +    D  V +SL+DMY K    
Sbjct: 98   TGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLP 157

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
               + VFD++ + N +                                   SW +++SGY
Sbjct: 158  DYGRAVFDSISSLNSI-----------------------------------SWTTMISGY 182

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK-PN 702
            +  G+  EA  +         Y N+  WT+LISG +Q+ N  ++   F++M+ E I   +
Sbjct: 183  ARSGRKFEAFRLFRQTP----YRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTD 238

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
               +SS++  C  L L + GK++H + +  G+    +++  LIDMY+K  +L +A+ +F 
Sbjct: 239  PLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFC 298

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            +   K + SW  +I+G A +G  +EA+ L+ E++  G +P+ +TF  L+ AC ++GLV +
Sbjct: 299  EMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSK 358

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G   F +M  D+ I P+++HY+C++DL  ++G+LDEA + IRTMP  PD   W ALL SC
Sbjct: 359  GRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSC 418

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            + HG+ + A   +  L  L+P + ++Y L+ N+ A +  WEDV ++R  M  +  K    
Sbjct: 419  KRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPG 478

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
            +S I + +  HVF A    HP   EI   +  L  EM+K GY PDT  V  D+D++EK +
Sbjct: 479  YSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKER 538

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+E+LA+ YGL+K      IR++KN RVC DCHT  K +S +  REI++RD  R+H
Sbjct: 539  QLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYH 598

Query: 1063 HFREGECSCNDCW 1075
            HF++G CSCND W
Sbjct: 599  HFKDGNCSCNDFW 611



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 229/514 (44%), Gaps = 33/514 (6%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           L  ++HA +IK G +    +   L+N YGKC  ++ A +LF  +    D + W  ++   
Sbjct: 21  LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPR-RDPVAWASLLTAC 79

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH--EGKQIHGYVLKSALES 429
             + +   A+ + R +  +           +++ACA +G  H  +GKQ+H     S    
Sbjct: 80  NLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSD 139

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           +  V + LI MY++    +    VFDS+   N  SW +MIS Y   G    A+ LF +  
Sbjct: 140 DDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTP 199

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV-SVVLQAVTELRLL 548
                 ++  W  L+SG    G+  +   L   M+  G       V S V+ A   L L 
Sbjct: 200 YR----NLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALW 255

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
           + G++ HG ++  G +  L++  +L+DMY K   L  A+ +F  M  +++V+W S+I G 
Sbjct: 256 ELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGT 315

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPN 667
              G    A  + ++M    +KP+ V++  L+   S  G   +   +   M ++ GI P+
Sbjct: 316 AQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPS 375

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-- 725
           +  +T L+    ++ +  E+      M    + P+  T ++LL +C   G  Q    I  
Sbjct: 376 LQHYTCLLDLFSRSGHLDEAENLIRTMP---VNPDEPTWAALLSSCKRHGNTQMAVRIAD 432

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWNCMIMGFA-- 780
           H L LK    +D      L ++Y+ +G   ++   R++      K    ++C+ +G    
Sbjct: 433 HLLNLKP---EDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSH 489

Query: 781 IYGNGK-------EAILLFHELLET----GFQPD 803
           ++  G+       E I L  EL E     G+ PD
Sbjct: 490 VFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPD 523



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/410 (21%), Positives = 183/410 (44%), Gaps = 51/410 (12%)

Query: 153 TSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKS 212
           T+ N +   H+  SI+ S  S    P   +      +C + G   + +          K 
Sbjct: 77  TACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQG---------KQ 127

Query: 213 KHAQMIKMGKIWNSDDMVKS-LIFHYLEFG--DFTSAA---------------------- 247
            HA+       ++ DD+VKS LI  Y +FG  D+  A                       
Sbjct: 128 VHARFFL--SPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARS 185

Query: 248 ----KAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGKGV-IFRSRILTI 299
               +AF L+    Y +   W++ +      G  V +   ++ E+  +G+ +    +L+ 
Sbjct: 186 GRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGV-DAFHLFVEMRHEGISVTDPLVLSS 244

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ++  C  L  + LG ++H  +I  G++  + +  AL++ Y KC D+ +A  +F E+   +
Sbjct: 245 VVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCR-K 303

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D + W  II+   ++ + E A+ L+ EM  +  K    T V ++ AC+  G   +G+ + 
Sbjct: 304 DVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLF 363

Query: 420 GYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGY 477
             +++   +  +L    CL+ ++SR+  L+ A  +  +M  + +  +W +++SS    G 
Sbjct: 364 RTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGN 423

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT-HGSYQNVLTLLRGMQSL 526
             +A  + + + +  ++P+  +   LLS  +   G +++V  + + M +L
Sbjct: 424 TQMAVRIADHLLN--LKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTL 471



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 134/316 (42%), Gaps = 54/316 (17%)

Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
           AKK+  Q+ +  +       N+L++ Y   G  ++AL +   +       + V W SL++
Sbjct: 22  AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRR----DPVAWASLLT 77

Query: 677 G-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL--QNGKEIHCLCLKNG 733
             +L N  +R +L     +      P+    +SL++ C  LG+L  + GK++H     + 
Sbjct: 78  ACNLSNRPHR-ALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSP 136

Query: 734 FIKDAYVATGLIDMYSK--------------------------SGNLKSARE-----VFR 762
           F  D  V + LIDMY+K                          SG  +S R+     +FR
Sbjct: 137 FSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFR 196

Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ-PDAITFTALLAACKNSGLVE 821
           ++  + L +W  +I G    GNG +A  LF E+   G    D +  ++++ AC N  L E
Sbjct: 197 QTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWE 256

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSC------MVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            G +        + ++ T+ + SC      ++D+  K   L  A  +I     + D   W
Sbjct: 257 LGKQM-------HGVVITLGYESCLFISNALIDMYAKCSDLVAA-KYIFCEMCRKDVVSW 308

Query: 876 GALLGSCRIHGHLEYA 891
            +++     HG  E A
Sbjct: 309 TSIIVGTAQHGQAEEA 324


>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
 gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
          Length = 654

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 207/597 (34%), Positives = 326/597 (54%), Gaps = 47/597 (7%)

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            S+FN++N     P+   +N L+ G+      +        M+  G  P   + + + +A 
Sbjct: 101  SIFNQVN----YPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKAC 156

Query: 543  TELRLLKYGRESHGY-ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
                 +  GR+ HG  IL  G   DL+VG S++DMY+K   L+  ++VFD M NR     
Sbjct: 157  GAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNR----- 211

Query: 602  NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
                                          D++SW  L+S Y   G  + A  +   +  
Sbjct: 212  ------------------------------DVISWTELISAYVKSGNMESAGELFDGLP- 240

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 ++V WT ++SG  QN   RE++ FF +MQ+  ++ +  T+  ++  C  LG  + 
Sbjct: 241  ---VKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKY 297

Query: 722  GKEIHCLCLKNGFIKDAYVATG--LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
               I  +  K+ F     V  G  LIDMYSK G++  A  VF+    + + S++ MI+GF
Sbjct: 298  ADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGF 357

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A++G   +A+ LF E+++T  +P+ +TF  +L AC ++G+VE+GW+ F+ M   Y I P+
Sbjct: 358  AMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPS 417

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
             +HY+CMVDLLG+AG L EA + ++TMP +P   +WGALLG+CRIH   + A IA+  LF
Sbjct: 418  ADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLF 477

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ-IVHVFSAE 958
            +LEP    NY L+ N+ A   RW DV  +R  M   G++    +SWI+ ++ +VH F + 
Sbjct: 478  ELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSG 537

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
               HP +GEI   L  L+  ++  GY P    V  D+++E+K ++L++H+EKLA+ +GL+
Sbjct: 538  DMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLI 597

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             T   + IR++KN R+C DCH+     S + GREI +RD  RFHHF +G CSC + W
Sbjct: 598  STIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 189/405 (46%), Gaps = 14/405 (3%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL--FSEVSDLEDDLLWNEIIMVKL 372
           +VHA ++  G D   ++   L+    K         L  F++V +  +  L+N +I   L
Sbjct: 64  QVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQV-NYPNPFLYNALIRGYL 122

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY-VLKSALESNL 431
             E+ + + + +  M+      +S T   + +AC        G+QIHG  +L      +L
Sbjct: 123 IEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDL 182

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N +I MY +   LE   +VFD M + ++ SW  +IS+Y   G ++ A  LF+ +   
Sbjct: 183 HVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVK 242

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               D++ W  ++SG   +   +  +     MQ  G   +  ++  V+ A  +L   KY 
Sbjct: 243 ----DMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYA 298

Query: 552 RESHGYILRN--GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
                   ++  G  + + VG++L+DMY K   + +A  VF  MK RN+ +++S+I G+ 
Sbjct: 299 DWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFA 358

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNV 668
             G   +A K+ ++M + EIKP+ V++  +++  S  G  ++   I   M K  GI P+ 
Sbjct: 359 MHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSA 418

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +T ++    +    +E+ +    M    I+P+     +LL  C
Sbjct: 419 DHYTCMVDLLGRAGRLQEAHELVKTMP---IEPHGGVWGALLGAC 460



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 35/266 (13%)

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA-SLIKRGFDFDVHLKC 333
           ++E  E +  +  +GV+  S   T + K C   M   LG ++H  +++  GF  D+H+  
Sbjct: 127 LKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGN 186

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR-------------------- 373
           ++++ Y KC  +E   K+F E+ +  D + W E+I   ++                    
Sbjct: 187 SMIDMYIKCGFLECGRKVFDEMPN-RDVISWTELISAYVKSGNMESAGELFDGLPVKDMV 245

Query: 374 -----------NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
                      N K   AI  F +MQ    +    T++ ++ ACA++GA      I    
Sbjct: 246 AWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVA 305

Query: 423 LKSALESNLSVC--NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
            KS      SV   + LI MYS+   +  A RVF  MK+ N+ S++SMI  +   G V  
Sbjct: 306 EKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHD 365

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSG 506
           A  LF++M  + I+P+ +T+  +L+ 
Sbjct: 366 AMKLFDEMVKTEIKPNRVTFIGVLTA 391



 Score = 46.6 bits (109), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 10/237 (4%)

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS---AREVFRK 763
           S ++ T  G   L   K++H   L NG  +  YV   LI   +K  N+        +F +
Sbjct: 47  SQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKL-NIPVDPYPLSIFNQ 105

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
                   +N +I G+ I    KE+   +  + + G  P + TFTAL  AC     V  G
Sbjct: 106 VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLG 165

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
            +              +   + M+D+  K G+L+        MP + D   W  L+ +  
Sbjct: 166 RQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNR-DVISWTELISAYV 224

Query: 884 IHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             G++E A      LF   P  +   + +M++  A + +  +       M E GV++
Sbjct: 225 KSGNMESAG----ELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVET 277


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14850;
            AltName: Full=Protein LOVASTATIN INSENSITIVE 1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 207/643 (32%), Positives = 339/643 (52%), Gaps = 37/643 (5%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            N +I+ Y+ L + + A  L  ++  +R   ++++W  L+SG   +G +   L     M+ 
Sbjct: 46   NYLINMYSKLDHPESA-RLVLRLTPAR---NVVSWTSLISGLAQNGHFSTALVEFFEMRR 101

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
             G  PN  +     +AV  LRL   G++ H   ++ G   D++VG S  DMY K     +
Sbjct: 102  EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
            A+++FD +  RN+  WN+ IS     G    A +   +    +  P+ +++ + ++  S 
Sbjct: 162  ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221

Query: 646  W-----GQSKEALVI--------------------IHHMKNSGIY------PNVVTWTSL 674
            W     G     LV+                       +++S I        N V+W SL
Sbjct: 222  WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            ++  +QN    ++   +++ +++ ++ +   +SS+L  C G+  L+ G+ IH   +K   
Sbjct: 282  VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
             +  +V + L+DMY K G ++ + + F +   K L + N +I G+A  G    A+ LF E
Sbjct: 342  ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401

Query: 795  LLETGF--QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
            +   G    P+ +TF +LL+AC  +G VE G K FDSM + Y I P  EHYSC+VD+LG+
Sbjct: 402  MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG ++ A++FI+ MP +P  ++WGAL  +CR+HG  +   +A+  LFKL+P +S N+ L+
Sbjct: 462  AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 521

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N  A + RW +   +R  +  VG+K    +SWI +   VH F A+   H    EI   L
Sbjct: 522  SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L +EM+  GY PD +    D++EEEK   +  H+EKLA+ +GL+      PIR+ KN 
Sbjct: 582  AKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNL 641

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+C DCH+  K++S    REI +RD  RFH F++G CSC D W
Sbjct: 642  RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  149 bits (376), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 221/512 (43%), Gaps = 43/512 (8%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA+++K         +   LI  Y +     SA     L  +R+   W+S +      G 
Sbjct: 29  HARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGH 88

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
               L+E + E+  +GV+          K    L     G ++HA  +K G   DV + C
Sbjct: 89  FSTALVEFF-EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +  + Y K R  + A KLF E+ +   +  WN  I   + + +   AI+ F E +     
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLE-TWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             S T    L AC+     + G Q+HG VL+S  ++++SVCN LI  Y +  ++  +  +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F  M   N  SW S++++Y      + A  L+      R + DI+  +  +         
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY-----LRSRKDIVETSDFM--------- 312

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
                                +S VL A   +  L+ GR  H + ++  ++  ++VG++L
Sbjct: 313 ---------------------ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSAL 351

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI--KP 631
           +DMY K  C++++++ FD M  +N+V  NSLI GY  +G    A  +  +M        P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411

Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKF 690
           + +++ SL+S  S  G  +  + I   M+++ GI P    ++ ++    +      + +F
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF 471

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
             +M    I+P  +   +L   C   G  Q G
Sbjct: 472 IKKMP---IQPTISVWGALQNACRMHGKPQLG 500



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 166/362 (45%), Gaps = 8/362 (2%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
           C        R   + K  HA  +K G+I   D  V    F  Y +      A K F    
Sbjct: 113 CAFKAVASLRLPVTGKQIHALAVKCGRIL--DVFVGCSAFDMYCKTRLRDDARKLFDEIP 170

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            R+   W++F+ +  +  G  +E +E + E         S      L  C+  +   LG+
Sbjct: 171 ERNLETWNAFISNSVT-DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 229

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H  +++ GFD DV +   L++FYGKC+ + S+  +F+E+   ++ + W  ++   ++N
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT-KNAVSWCSLVAAYVQN 288

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + E A  L+   +    +     I  +L ACA +     G+ IH + +K+ +E  + V 
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM--NSSR 492
           + L+ MY +   +E + + FD M + NL + NS+I  Y   G VD+A +LF +M      
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYG 551
             P+ +T+  LLS     G+ +N + +   M+S  G  P     S ++  +    +++  
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468

Query: 552 RE 553
            E
Sbjct: 469 YE 470



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 183/429 (42%), Gaps = 36/429 (8%)

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL--YVGTSLMDMYVKNDCLQNAQE 588
           +  ++ ++L+       ++ GR  H  I++  LD     ++   L++MY K D  ++A+ 
Sbjct: 5   SADALGLLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARL 63

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------LVSWNS 638
           V      RN+V+W SLISG    G F  A     +M  E + P+          + S   
Sbjct: 64  VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYP---------------------NVVTWTSLISG 677
            V+G  I   + +   I+        +                      N+ TW + IS 
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
           S+ +   RE+++ FI+ ++ D  PNS T  + L  C     L  G ++H L L++GF  D
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             V  GLID Y K   ++S+  +F +   K   SW  ++  +      ++A +L+    +
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303

Query: 798 TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
              +      +++L+AC     +E G +   + +    +  TI   S +VD+ GK G ++
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELG-RSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
           ++      MP K +     +L+G     G ++ A      +       + NY   ++LL+
Sbjct: 363 DSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421

Query: 918 MSNRWEDVE 926
             +R   VE
Sbjct: 422 ACSRAGAVE 430



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 206/537 (38%), Gaps = 72/537 (13%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKR-GFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           L ++LK      +  LG  VHA ++K         L   L+N Y K    ESA +L   +
Sbjct: 9   LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA-RLVLRL 67

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
           +   + + W  +I    +N  +  A+  F EM+         T     +A A +     G
Sbjct: 68  TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           KQIH   +K     ++ V      MY +    + A ++FD + + NL +WN+ IS+    
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G    A   F +                + GH                      PN  + 
Sbjct: 188 GRPREAIEAFIEFRR-------------IDGH----------------------PNSITF 212

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
              L A ++   L  G + HG +LR+G D D+ V   L+D Y K   +++++ +F  M  
Sbjct: 213 CAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT 272

Query: 596 RNIVAWNSLISGYC-------FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---GYSI 645
           +N V+W SL++ Y           L++ ++K + +  +  I   L +   +     G SI
Sbjct: 273 KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI 332

Query: 646 WGQSKEALVIIHHMKNSGIY---------------------PNVVTWTSLISGSLQNENY 684
              + +A V       S +                       N+VT  SLI G       
Sbjct: 333 HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV 392

Query: 685 RESLKFFIQMQQEDI--KPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVA 741
             +L  F +M        PN  T  SLL  C   G ++NG +I   +    G    A   
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY 452

Query: 742 TGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
           + ++DM  ++G ++ A E  +K     T++ W  +     ++G  +  +L    L +
Sbjct: 453 SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/535 (37%), Positives = 303/535 (56%), Gaps = 38/535 (7%)

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L++MYVK   L +AQ+VFD M +RN+V+W ++IS Y    L   A + L  M  E ++P+
Sbjct: 6    LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65

Query: 633  LVSWNS--------------------------------LVSGYSIWGQSKEALVIIHHMK 660
            + +++S                                L+  YS WG+ + AL +   M 
Sbjct: 66   MFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM- 124

Query: 661  NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
               +  ++V W+S+I+G  QN +  E+L+ F +M++       TT++S+L+ C GL LL+
Sbjct: 125  ---VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLE 181

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
             G+++H   LK  + +D  +   L+DMY K G+L+ A  VF +   K + SW+ MI G A
Sbjct: 182  LGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLA 239

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
              G  KEA+ LF  +   G +P+ +T   +L AC ++GLVEEG  YF SM   + I P  
Sbjct: 240  QNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGR 299

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            EHY CM+DLLG+AG L EA D I  M  +PDA  W ALL +CR+H +++ A  A++++ +
Sbjct: 300  EHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILR 359

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            L+P ++  Y L+ N+ A + RW DV  +R +M   G+K     SWI++ + +H F     
Sbjct: 360  LDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDR 419

Query: 961  PHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
             HP   EI  +L  L+ ++  +GYVPDT  V QD++ E+    L  H+EKLAIV+GLM  
Sbjct: 420  SHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSL 479

Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                 IR+ KN R+C DCH   K ++ +  R I +RD  R+HHF++G CSC D W
Sbjct: 480  PRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 53/384 (13%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII----MVKLRNEKWENAIKLFREMQFS 390
           L+N Y K   +  A  +F ++ D  + + W  +I      KL ++  E  + + RE    
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPD-RNVVSWTTMISAYSAAKLNDKALEFLVLMLRE---- 60

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             +    T   +L+AC   G F+  +Q+H  ++K  L+S++ V + LI +YSR  +LE A
Sbjct: 61  GVRPNMFTYSSVLRACD--GLFNL-RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            RVFD M   +L  W+S+I+ +      D A  LF +M  +                   
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRA------------------- 158

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                           GF    ++++ VL+A T L LL+ GR+ H ++L+   D DL + 
Sbjct: 159 ----------------GFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 200

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            +L+DMY K   L++A  VF  M  +++++W+++I+G    G    A K+   M+   IK
Sbjct: 201 NALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIK 260

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLK 689
           P+ V+   ++   S  G  +E L   H MK   GI P    +  +I    +     E++ 
Sbjct: 261 PNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVD 320

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
              +M+ E   P++ T  +LL  C
Sbjct: 321 LINEMECE---PDAVTWRALLNAC 341



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 12/290 (4%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           ++  LI  Y++FG    A   F     R+   W++ +  Y S      + LE    +  +
Sbjct: 2   LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAY-SAAKLNDKALEFLVLMLRE 60

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           GV       + +L+ C  L       ++H  +IK G D DV ++ AL++ Y +  ++E+A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            ++F E+    D ++W+ II    +N   + A++LF+ M+ +   A   T+  +L+AC  
Sbjct: 118 LRVFDEMVT-GDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +     G+Q+H +VLK   + +L + N L+ MY +   LE A  VF  M + ++ SW++M
Sbjct: 177 LALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT-----WNCLLSGHFTHGSY 513
           I+     GY   A  LF  M    I+P+ +T     + C  +G    G Y
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLY 284


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/760 (31%), Positives = 383/760 (50%), Gaps = 83/760 (10%)

Query: 315  EVHASLIKRGFDFDVHL---KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
            ++H+  IK G   + HL   K  +     +  DV  A K+F E+       +WN +I   
Sbjct: 53   QIHSQTIKTGLSSN-HLFLTKVIIFCCTKESGDVYYARKVFDEIPQ-PSVFIWNTMIKGY 110

Query: 372  LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY-VLKSALESN 430
             R    E+ + L++ M   + K    T   +L+   K  A   GK +  + V+   L+SN
Sbjct: 111  SRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSN 170

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
            L V    I ++S    +  A ++FD M D                      W        
Sbjct: 171  LFVQKGFIHLFSLCGLVNYARKIFD-MGD---------------------GW-------- 200

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG--FRPNGSSVSVVLQAVTELRLL 548
                 +++TWN +LSG+     Y+    L   M+       PN  ++ ++L A ++L+ L
Sbjct: 201  -----EVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDL 255

Query: 549  KYGRESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
              G+  +   ++ G+ + +L +  +L+DM+     +  A+ VFD MK R           
Sbjct: 256  VGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR----------- 304

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                    D++SW S+V+G++   +   A      M       +
Sbjct: 305  ------------------------DVISWTSIVTGFANTCRIDLARKYFDQMPER----D 336

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
             V+WT++I G L+   ++E L  F  MQ  ++KP+  TM S+L  C  LG L+ G+    
Sbjct: 337  YVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKT 396

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
               KN    D ++   LIDMY K GN++ A+++F +   K   +W  MI+G A  G+G+E
Sbjct: 397  YIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEE 456

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+ +F  +LE    PD IT+  ++ AC + GLV +G  +F +M+  + I P + HY CMV
Sbjct: 457  ALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMV 516

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG+AG+L EA + I  MP KP++ +WG+LLG+CR+H +++ AE+A+  + +LEP N A
Sbjct: 517  DLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGA 576

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y L+ N+ A   +W+++  +R  M E G+K +   S ++++ IV+ F A    HP + E
Sbjct: 577  VYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKE 636

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            IY +L ++  ++   GY PDT  V+ D+ EE+K   L  H+EKLAI Y L+ +     IR
Sbjct: 637  IYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIR 696

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            ++KN R+C DCH  A  +S V  RE+ +RD  RFHHFR G
Sbjct: 697  IVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 247/511 (48%), Gaps = 25/511 (4%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYL-EFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF- 271
           H+Q IK G   N   + K +IF    E GD   A K F      S   W++ ++ Y    
Sbjct: 55  HSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRIN 114

Query: 272 ----GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLG-VEVHASLIKRGFD 326
               G  + +L+ V   +   G  F       +LK  TK MA   G V ++ ++I    D
Sbjct: 115 CSESGVSLYKLMLV-HNIKPDGFTF-----PFLLKGFTKDMALKYGKVLLNHAVIHGFLD 168

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            ++ ++   ++ +  C  V  A K+F ++ D  + + WN ++    R +++E + +LF E
Sbjct: 169 SNLFVQKGFIHLFSLCGLVNYARKIF-DMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIE 227

Query: 387 MQ--FSSAKAISRTIVKMLQACAKVGAFHEGKQIHG-YVLKSALESNLSVCNCLISMYSR 443
           M+         S T+V ML AC+K+     GK I+  Y+ +  +E NL + N LI M++ 
Sbjct: 228 MEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFAS 287

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
             +++ A  VFD MK  ++ SW S+++ +     +D+A   F++M     + D ++W  +
Sbjct: 288 CGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMP----ERDYVSWTAM 343

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           + G+     ++ VLTL R MQ    +P+  ++  +L A   L  L+ G  +  YI +N +
Sbjct: 344 IDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKI 403

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D ++G +L+DMY K   ++ A+++F+ M+ ++   W ++I G    G    A  M + 
Sbjct: 404 KNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSY 463

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNE 682
           M E  + PD +++  ++   +  G   +      +M    GI PN+  +  ++    +  
Sbjct: 464 MLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAG 523

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + +E+L+  + M    +KPNS    SLL  C
Sbjct: 524 HLKEALEVIMNMP---VKPNSIVWGSLLGAC 551



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 7/129 (5%)

Query: 687 SLKFFIQMQQEDIKPNSTTMS--SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
           SL  F++    +   +S   S  SLL+TC  +  +    +IH   +K G   +    T +
Sbjct: 17  SLSLFLKRMISNTPLHSFVKSPISLLETCNTMYEIN---QIHSQTIKTGLSSNHLFLTKV 73

Query: 745 IDM--YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
           I      +SG++  AR+VF +    ++  WN MI G++     +  + L+  +L    +P
Sbjct: 74  IIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKP 133

Query: 803 DAITFTALL 811
           D  TF  LL
Sbjct: 134 DGFTFPFLL 142


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 254/818 (31%), Positives = 400/818 (48%), Gaps = 94/818 (11%)

Query: 306  KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-W 364
            ++ A   G +VHA   K G   D  +  +L++ YG+C  VE A K+F  + D   +++ W
Sbjct: 80   RVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSW 139

Query: 365  NEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVL 423
            N  +M  L  +     ++LFR+   +    +   T+V +L  CA +G    G+ +HG   
Sbjct: 140  N-ALMAALSGDP-RRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAA 197

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            KS  ++   V N L+ MY++  +L  A R F                             
Sbjct: 198  KSGWDAPARVGNALVDMYAKCGELADAERAFPE--------------------------- 230

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS------SVSV 537
                       P +++WN +L  +  +        LLR MQ    + +GS      +V  
Sbjct: 231  ----------APSVVSWNVMLGAYTRNREAGAAFGLLRDMQ---IKEHGSVPADEITVLS 277

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL A +    L   RE H + +R GLD     V  +L+  Y +   L +A  VF +++ +
Sbjct: 278  VLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRK 337

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---------------- 640
             + +WN+LIS +  +      +  +       +KPD  S  SL+                
Sbjct: 338  TVSSWNTLISAHAQQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATH 397

Query: 641  -------------------SGYSIWGQSKE-ALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                               S Y    +++  A V+   M+  G     V W ++ISG  Q
Sbjct: 398  GFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKG----EVLWIAMISGYSQ 453

Query: 681  NENYRESLKFFIQMQQEDIKPNST-TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
            N    ESL+ F +MQ  +   +S  + +S L  C  L  ++ GKE+HC  LK     D +
Sbjct: 454  NGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPF 513

Query: 740  VATGLIDMYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            +++ LIDMYSK G ++ AR  F R  A     SW  MI G+A+ G G+EA+ L+ ++   
Sbjct: 514  LSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRRE 573

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT-IEHYSCMVDLLGKAGYLD 857
            G +PD  T+  LL AC ++G++EEG ++FD M   ++ I   +EHYSC++ +L +AG   
Sbjct: 574  GMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFA 633

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            +A   +  MP +PDA I  ++L +C IHG  E     + RL +LEP  + +Y L  N+ A
Sbjct: 634  DAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYA 693

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             S RW+D+ ++R  + + G+      SWI +   V+ F A   PHP   ++      L  
Sbjct: 694  GSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEE 753

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
             ++++GYVPDT  V  +++EEEK + L  H+EK A+ +GL++T + A +RV KN R+C D
Sbjct: 754  RIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLRTATPATVRVFKNIRMCKD 813

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH AA+ +S V GR+I +RD  RFHHFR G CSC D W
Sbjct: 814  CHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 167/701 (23%), Positives = 290/701 (41%), Gaps = 143/701 (20%)

Query: 170 SPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDM 229
           +P    LPP       A  SC   GF  +      R +      HA   K+G     D  
Sbjct: 63  APDRFTLPP-------AARSC---GFLRVGAAAAGRQV------HALAAKLG--LPGDPF 104

Query: 230 V-KSLIFHYLEFGDFTSAAKAF--FLYFSRSYADWSSFLEDYESFGGEVQELLEVWGE-L 285
           V  SL+  Y   G    A K F      +R+   W++ +    +  G+ +  LE++ + L
Sbjct: 105 VGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMA---ALSGDPRRGLELFRDCL 161

Query: 286 HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
              G +     L  +L +C  L     G  VH    K G+D    +  AL++ Y KC ++
Sbjct: 162 VAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGEL 221

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF---SSAKAISRTIVKM 402
             A + F E   +   + WN ++    RN +   A  L R+MQ     S  A   T++ +
Sbjct: 222 ADAERAFPEAPSV---VSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSV 278

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           L AC+        +++H + ++  L+ ++  V N L++ Y R  +L  A RVF  ++   
Sbjct: 279 LPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKT 338

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           +SSWN++IS++        A  LF +M +                               
Sbjct: 339 VSSWNTLISAHAQQNTA-AAIELFIQMTN------------------------------- 366

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
              + G +P+G S+  +L A  + + L + + +HG+ILRNGL+ D  +  SL+  Y++  
Sbjct: 367 ---ACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIR-- 421

Query: 582 CLQN---AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE---------- 628
           C +    A+ +FD M+ +  V W ++ISGY   GL   + ++  +M+  E          
Sbjct: 422 CSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISAT 481

Query: 629 ----------------------IKPDLVS----WNSLVSGYSIWGQSKEALVIIHHMKNS 662
                                 +K DL       +SL+  YS  G  ++A      +K  
Sbjct: 482 SALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKAR 541

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                 V+WT++I+G   N   RE+++ + +M++E ++P+  T   LL  CG  G+L+ G
Sbjct: 542 DAK---VSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEG 598

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
                                 +  + +  N     EV        L  ++C+I   +  
Sbjct: 599 ----------------------LRFFDEMRNHHHKIEV-------KLEHYSCVIGMLSRA 629

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
           G   +A+ L  E+ +   +PDA   +++L+AC   G  E G
Sbjct: 630 GRFADAVALMAEMPQ---EPDAKILSSVLSACHIHGEAELG 667



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 126/537 (23%), Positives = 218/537 (40%), Gaps = 94/537 (17%)

Query: 398 TIVKMLQACA--KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           T+    ++C   +VGA   G+Q+H    K  L  +  V N L+SMY R  ++E A +VF 
Sbjct: 68  TLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFG 127

Query: 456 SMKD--HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
            + D   N+ SWN+++++                                LSG    G  
Sbjct: 128 GIPDAARNIVSWNALMAA--------------------------------LSGDPRRG-- 153

Query: 514 QNVLTLLRG-MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
              L L R  + ++G   + +++  VL     L   + GR  HG   ++G D    VG +
Sbjct: 154 ---LELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNA 210

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE---I 629
           L+DMY K   L +A+  F      ++V+WN ++  Y        A  +L  M+ +E   +
Sbjct: 211 LVDMYAKCGELADAERAFPEAP--SVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSV 268

Query: 630 KPDLVSW------------------------------------NSLVSGYSIWGQSKEAL 653
             D ++                                     N+LV+ Y   G+   A 
Sbjct: 269 PADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHAD 328

Query: 654 VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQT 712
            +   ++       V +W +LIS   Q +N   +++ FIQM     +KP+  ++ SLL  
Sbjct: 329 RVFTDIRRK----TVSSWNTLISAHAQ-QNTAAAIELFIQMTNACGLKPDGFSIGSLLMA 383

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS-AREVFRKSANKTLAS 771
           C     L + K  H   L+NG  +D  +   L+  Y +    +  AR +F     K    
Sbjct: 384 CADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVL 443

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITFTALLAACKNSGLVEEGWK-YFDS 829
           W  MI G++  G   E++ LF E+    G     I+ T+ L AC     V  G + +  +
Sbjct: 444 WIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFA 503

Query: 830 MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           +  D    P +   S ++D+  K G++++A  F   +  +     W A++    ++G
Sbjct: 504 LKADLCDDPFLS--SSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNG 558



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 155/356 (43%), Gaps = 40/356 (11%)

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQ--SLGFRPNGSSVSVVLQAVTELRL--LKYGRESH 555
           WN LL+ H   G + + L LL  +   S G  P+  ++    ++   LR+     GR+ H
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN--RNIVAWNSLISGYC---- 609
               + GL  D +VG SL+ MY +   +++A++VF  + +  RNIV+WN+L++       
Sbjct: 92  ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALSGDPR 151

Query: 610 -----FKGLFVNAKKMLNQMEEEEIKP--DLVSWN---------SLVSGYSIWGQSKEAL 653
                F+   V    M+++     + P    + W+         +  SG+    +   AL
Sbjct: 152 RGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNAL 211

Query: 654 VIIHHM--------KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED---IKPN 702
           V ++          +     P+VV+W  ++    +N     +      MQ ++   +  +
Sbjct: 212 VDMYAKCGELADAERAFPEAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPAD 271

Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF-IKDAYVATGLIDMYSKSGNLKSAREVF 761
             T+ S+L  C G   L   +E+H   ++ G       V   L+  Y + G L  A  VF
Sbjct: 272 EITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVF 331

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITFTALLAACKN 816
                KT++SWN +I   A   N   AI LF ++    G +PD  +  +LL AC +
Sbjct: 332 TDIRRKTVSSWNTLISAHA-QQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACAD 386



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 11/190 (5%)

Query: 697 EDIKPNSTTMSSLLQTCGGL--GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
           E I P+  T+    ++CG L  G    G+++H L  K G   D +V   L+ MY + G +
Sbjct: 60  EGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRV 119

Query: 755 KSAREVFR--KSANKTLASWNCMIMGFAIYGNGKEAILLFHE-LLETGFQPDAITFTALL 811
           + A +VF     A + + SWN ++   A+ G+ +  + LF + L+  G   D  T   +L
Sbjct: 120 EDAEKVFGGIPDAARNIVSWNALMA--ALSGDPRRGLELFRDCLVAVGGMVDEATLVTVL 177

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             C   G  E G +    ++            + +VD+  K G L +A    R  P  P 
Sbjct: 178 PMCAALGWSETG-RAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAE---RAFPEAPS 233

Query: 872 ATIWGALLGS 881
              W  +LG+
Sbjct: 234 VVSWNVMLGA 243


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/800 (29%), Positives = 404/800 (50%), Gaps = 79/800 (9%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            VHA +++      + L+  L+  Y  CR    A +L  E+    + + +N +I    R  
Sbjct: 36   VHAHIVRAHPSPSLFLRNTLLAAY--CRLGGHARRLLDEMPR-TNAVSFNLLIDAYSRAG 92

Query: 376  KWENAIKLF-REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + E +++ F R  + +  +A   T    L AC++ G   EGK +H   +   +   + V 
Sbjct: 93   QPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVS 152

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N L+SMY+R   +  A +VFD+  +                                   
Sbjct: 153  NSLVSMYARCGDMGQARQVFDAADER---------------------------------- 178

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ--AVTELRLLKYGR 552
             D ++WN L+SG+   G+  ++L +   M+  G   N  ++  V++  A ++  ++    
Sbjct: 179  -DDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAA 237

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
              HG +++ G D D+++ ++++ MY K   L  A  +F ++ + N+V +N++I+G C   
Sbjct: 238  AVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDE 297

Query: 613  LFVN------AKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIHHMK- 660
              V       A  + ++++   ++P   +++S++   ++     +G+     V+ H  + 
Sbjct: 298  AAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQG 357

Query: 661  -------------NSGIYPN------------VVTWTSLISGSLQNENYRESLKFFIQMQ 695
                         NSG   +            VVTWT++ISG +QNE +  +L  F ++ 
Sbjct: 358  DDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELL 417

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
               +KP+  T+SS++  C  L + + G++I C   K+GF +   +    I MY++SG++ 
Sbjct: 418  GAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVH 477

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            +A   F++  +  + SW+ +I   A +G  ++A+  F+E+++    P+ ITF  +L AC 
Sbjct: 478  AAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACS 537

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + GLV+EG KY+++M  +Y + PTI+H +C+VDLLG+AG L +A  FIR   F  +  IW
Sbjct: 538  HGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIW 597

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
             +LL SCRIH  +E  ++ + R+ +L+P +SA+Y  + N+   +       ++R  M E 
Sbjct: 598  RSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKER 657

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            GVK     SWI++   VH F A    HP +  IY +L  ++S++ KL     +     D 
Sbjct: 658  GVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDT 717

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
               E+   +  H+EKLA+  GL+     APIRV+KN RVC DCH   K +S    REI L
Sbjct: 718  IRNEQ-SWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVL 776

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHFR+G CSC D W
Sbjct: 777  RDAIRFHHFRDGSCSCADYW 796



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 125/593 (21%), Positives = 259/593 (43%), Gaps = 70/593 (11%)

Query: 247 AKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL-TIILKLCT 305
           A+       R+ A   + L D  S  G+ +  LE +        +   R      L  C+
Sbjct: 66  ARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACS 125

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
           +      G  VHA  +  G    V +  +L++ Y +C D+  A ++F + +D  DD+ WN
Sbjct: 126 RAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVF-DAADERDDVSWN 184

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG--AFHEGKQIHGYVL 423
            ++   +R    ++ +++F  M+ S     S  +  +++ CA            +HG V+
Sbjct: 185 ALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVV 244

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           K+  +S++ + + ++ MY++   L  A  +F S+ D N+  +N+MI+   GL   + A  
Sbjct: 245 KAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIA---GLCRDEAA-- 299

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                    +  D++               +  L+L   +QS G  P   + S V++A  
Sbjct: 300 ---------VGTDVL---------------REALSLYSEVQSRGMEPTEFTFSSVIRACN 335

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
               +++G++ HG +L++    D ++G++L+D+Y+ + C+++    F ++  +++V W +
Sbjct: 336 LAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTA 395

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI-------- 655
           +ISG     LF  A  + +++    +KPD  + +S+++  +    ++    I        
Sbjct: 396 MISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSG 455

Query: 656 -----------IHHMKNSGIY------------PNVVTWTSLISGSLQNENYRESLKFFI 692
                      IH    SG               ++V+W+++IS   Q+   R++L+FF 
Sbjct: 456 FGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFN 515

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV--ATGLIDMYSK 750
           +M    + PN  T   +L  C   GL+  G + +   +K  +     +   T ++D+  +
Sbjct: 516 EMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYY-ETMKEEYALSPTIKHCTCVVDLLGR 574

Query: 751 SGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
           +G L  A    R S  +     W  ++    I+ + +   L+   ++E   QP
Sbjct: 575 AGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIME--LQP 625



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 195/453 (43%), Gaps = 46/453 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y   GD   A + F     R    W++ +  Y   G +  ++L V+  +   G+ 
Sbjct: 154 SLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQ-DDMLRVFAMMRRSGIG 212

Query: 292 FRSRILTIILKLC--TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
             S  L  ++K C  +      +   VH  ++K GFD DV L  A++  Y K   +  A 
Sbjct: 213 LNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAV 272

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEK------WENAIKLFREMQFSSAKAISRTIVKML 403
            LF  V D  + +++N +I    R+E          A+ L+ E+Q    +    T   ++
Sbjct: 273 ALFKSVLD-PNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVI 331

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +AC   G    GKQIHG VLK   + +  + + LI +Y  +  +E   R F S+   ++ 
Sbjct: 332 RACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVV 391

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +W +MIS        + A +LF+++  + ++PD  T                        
Sbjct: 392 TWTAMISGCVQNELFERALTLFHELLGAGLKPDPFT------------------------ 427

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                      +S V+ A   L + + G +   +  ++G      +G S + MY ++  +
Sbjct: 428 -----------ISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDV 476

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             A   F  M++ +IV+W+++IS +   G   +A +  N+M + ++ P+ +++  +++  
Sbjct: 477 HAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTAC 536

Query: 644 SIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLI 675
           S  G   E L     MK    + P +   T ++
Sbjct: 537 SHGGLVDEGLKYYETMKEEYALSPTIKHCTCVV 569



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 17/269 (6%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H Q++K    +  DD + S LI  YL  G      + F     +    W++ +    
Sbjct: 344 KQIHGQVLK--HCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMIS--- 398

Query: 270 SFGGEVQ-ELLE----VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
              G VQ EL E    ++ EL G G+      ++ ++  C  L     G ++     K G
Sbjct: 399 ---GCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSG 455

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F     +  + ++ Y +  DV +A + F E+    D + W+ +I    ++    +A++ F
Sbjct: 456 FGRFTAMGNSCIHMYARSGDVHAAVRRFQEMES-HDIVSWSAVISSHAQHGCARDALRFF 514

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSR 443
            EM  +       T + +L AC+  G   EG + +  + +  AL   +  C C++ +  R
Sbjct: 515 NEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGR 574

Query: 444 NNKLELATR-VFDSMKDHNLSSWNSMISS 471
             +L  A   + DS+       W S+++S
Sbjct: 575 AGRLADAEAFIRDSIFHDEPVIWRSLLAS 603


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/738 (30%), Positives = 350/738 (47%), Gaps = 94/738 (12%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            + I  ML+A A   A H G Q+HG +LK    S+  + N LI MY++  +L +A  VF  
Sbjct: 5    KMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGG 64

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M + N                                   +++W  L+ G   HG  +  
Sbjct: 65   MPERN-----------------------------------VVSWTALMVGFLRHGDAREC 89

Query: 517  LTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            L LL  M+SL    PN  ++S  L+A   +  +  G   HG  +R G +    V  SL+ 
Sbjct: 90   LRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVL 149

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-----LFVNAKKMLNQMEEEEIK 630
            +Y K   + +A+ VFD    RN+V WN++ISGY   G     L V  +    + EEE+ +
Sbjct: 150  LYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQ 209

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI-------------------------- 664
            PD  ++ SL+      G ++E   +   M   G+                          
Sbjct: 210  PDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMA 269

Query: 665  --------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
                      N + WT++I G  Q    +E+++ F +     ++ +   +SS++      
Sbjct: 270  MQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADF 329

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
             L++ G+++HC  +K     D  VA  LIDMY K G    A   FR+   + + SW  MI
Sbjct: 330  ALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMI 389

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
             G   +G+G+EAI +F E+   G +PD + + ALL+AC +SGLVEE  +YF ++  D  +
Sbjct: 390  NGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRL 449

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P  EHY+CMVDLLG+AG L EA D + TMP  P   +W  LL +CR+H ++     A  
Sbjct: 450  RPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGE 509

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             L  ++  N  NY ++ N+ A +  W + +R+R +M   G++     SW+++ +  H F 
Sbjct: 510  TLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFY 569

Query: 957  AEG-APHPATGEIYFELYHLVSEMK-KLGYVPD-----TRCVYQDIDEEEKGKVLLSHTE 1009
              G   HP   +I   L  +   M+ +LGY P      +     D+DEE + + L +H+E
Sbjct: 570  GGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSSSSEAALHDVDEESRAESLRAHSE 629

Query: 1010 KLAIVY------------GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            +LA+              G+  TK +  IRV KN RVC DCH   K +S V GR + +RD
Sbjct: 630  RLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFKGLSSVVGRVLVVRD 689

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFH F +G CSC D W
Sbjct: 690  ANRFHRFEDGVCSCKDYW 707



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 126/545 (23%), Positives = 236/545 (43%), Gaps = 89/545 (16%)

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
           R +++  +L+      A   G ++H +L+K GF  D  L   L++ Y KC ++  A ++F
Sbjct: 3   RRKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVF 62

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGA 411
             + +  + + W  +++  LR+      ++L   M+  S  A +  T+   L+AC  VG 
Sbjct: 63  GGMPE-RNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGD 121

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G  IHG  +++  E +  V N L+ +YS+  ++  A RVFD     NL +WN+MIS 
Sbjct: 122 MAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISG 181

Query: 472 YTGLGYVDVAWSLFNKMNSSRI-----QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           Y   G+   +  +F +M   R      QPD  T+                 +LL+   SL
Sbjct: 182 YAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTF----------------ASLLKACGSL 225

Query: 527 GFRPNGSSV--SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC-L 583
           G    G+ V  ++V++ V+                      +  +  +L+DMYVK  C L
Sbjct: 226 GAAREGAQVHAAMVIRGVSTA-------------------SNAILAGALLDMYVKCRCLL 266

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------- 632
             A +VF+ ++ +N + W ++I G+  +G    A ++  +     ++ D           
Sbjct: 267 PMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVF 326

Query: 633 ----LVSW--------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
               LV                      NSL+  Y   G + EA      +       NV
Sbjct: 327 ADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPAR----NV 382

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           V+WT++I+G  ++ + +E++  F +M+ E ++P+     +LL  C   GL++  +     
Sbjct: 383 VSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSA 442

Query: 729 CLKNGFIKD-AYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGN-- 784
              +  ++  A     ++D+  ++G L  A++ V       T+  W  ++    ++ N  
Sbjct: 443 IRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVT 502

Query: 785 -GKEA 788
            G+EA
Sbjct: 503 VGREA 507



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 10/285 (3%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  SL+  Y + G    A + F     R+   W++ +  Y +  G  ++ L V+ E+  +
Sbjct: 143 VANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGY-AHAGHGRDSLLVFREMQQR 201

Query: 289 GVIFRSR-----ILTIILKLCTKLMAFWLGVEVHASLIKRGFDF--DVHLKCALMNFYGK 341
                           +LK C  L A   G +VHA+++ RG     +  L  AL++ Y K
Sbjct: 202 RQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVK 261

Query: 342 CRDV-ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV 400
           CR +   A ++F+ + + ++ + W  +I+   +  + + A++LF     S  +A    + 
Sbjct: 262 CRCLLPMAMQVFNRL-EQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLS 320

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            ++   A      +G+Q+H Y +K+    ++SV N LI MY +    + A R F  +   
Sbjct: 321 SVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPAR 380

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
           N+ SW +MI+     G+   A  +F +M +  ++PD + +  LLS
Sbjct: 381 NVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLS 425



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 3/201 (1%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+V+E +E++G     GV     +L+ ++ +         G +VH   +K     DV + 
Sbjct: 295 GQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVA 354

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L++ Y KC   + A + F EV    + + W  +I    ++   + AI +F EM+    
Sbjct: 355 NSLIDMYHKCGLTDEAARRFREVP-ARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGV 413

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELAT 451
           +      + +L AC+  G   E ++    +     L        C++ +  R  +L  A 
Sbjct: 414 EPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAK 473

Query: 452 RVFDSMK-DHNLSSWNSMISS 471
            +  +M     +  W +++S+
Sbjct: 474 DLVATMPMAPTVGVWQTLLSA 494


>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
          Length = 799

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/642 (33%), Positives = 334/642 (52%), Gaps = 45/642 (7%)

Query: 418  IHGYVLKSALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H   L++ L S    V N LI MY R      A R FD +   +  +W  +IS    +G
Sbjct: 128  LHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMG 187

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             +     L ++        D+I+W  L++ +      +  +   + M S G  P+  +V 
Sbjct: 188  MLCDTQLLLSQAPVR----DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVI 243

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
             VL A  +L+ L+ GR  H  +   G+     +  +L+DMY K     +AQ+VFD +   
Sbjct: 244  AVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGR- 302

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
                                              P   SWN+++ GY   G    A  + 
Sbjct: 303  ---------------------------------GPRPQSWNAIIDGYCKHGHVDVARSLF 329

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
              M+      +++T+ S+++G + +   RE+L  F+ M++ D++ ++ T+ +LL  C  L
Sbjct: 330  DEMEVR----DIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASL 385

Query: 717  GLLQNGKEIHCLCLKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            G LQ G+ +H  C++   ++ D Y+ T L+DMY K G +  A  VF++   + + +W  M
Sbjct: 386  GALQQGRALHA-CIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAM 444

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I G A  G GK A+  F+++   GFQP+++++ A+L AC +S L+ EG  YFD M   YN
Sbjct: 445  IAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYN 504

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P IEHY CM+DLLG++G LDEA D ++TMP +P+A IW ++L +CR+H H++ A+ A+
Sbjct: 505  IHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAA 564

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
              L KLEP     Y  + N+   S +WE+  ++R  M+E  VK    +S I +   VH F
Sbjct: 565  EHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKF 624

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                  HP   EI   L  +   +K LGY P T  +  D+DEEEK + LL+H+EKLAI +
Sbjct: 625  VVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAF 684

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            GL+      P+ + KN RVC DCH+A K +S +  REI +RD
Sbjct: 685  GLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRD 726



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 199/413 (48%), Gaps = 19/413 (4%)

Query: 308 MAFWLGVEVHASLIKRGFDFDVHLKCA-----LMNFYGKCRDVESANKLFSEVSDLEDDL 362
           M   LG+   A   +R FD ++H+K A     L++   K   +     L S+ + + D +
Sbjct: 151 MYIRLGLAADA---RRAFD-EIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQ-APVRDVI 205

Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
            W  +I    R  +   A+  F+ M          T++ +L ACAK+     G+ +H  V
Sbjct: 206 SWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLV 265

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVA 481
            +  + ++ ++   LI MY++      A +VFD++ +     SWN++I  Y   G+VDVA
Sbjct: 266 EEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVA 325

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
            SLF++M       DIIT+N +++G+   G  +  L L   M+    R +  +V  +L A
Sbjct: 326 RSLFDEMEVR----DIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTA 381

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
              L  L+ GR  H  I +  ++ D+Y+GT+L+DMY+K   +  A  VF  M  R++  W
Sbjct: 382 CASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTW 441

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
            ++I+G  F G+   A +   QM  +  +P+ VS+ ++++  S      E  +    M+ 
Sbjct: 442 TAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRI 501

Query: 662 -SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
              I+P +  +  +I    ++    E++     M    I+PN+   +S+L  C
Sbjct: 502 LYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMP---IQPNAVIWASILSAC 551



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 161/389 (41%), Gaps = 77/389 (19%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R    W+S +  Y S     +E +  +  +   G+      +  +L  C KL    LG  
Sbjct: 202 RDVISWTSLIAAY-SRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRS 260

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRD------------------------------- 344
           +H  + ++G     +L  AL++ Y KC D                               
Sbjct: 261 LHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHG 320

Query: 345 -VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            V+ A  LF E+ ++ D + +N ++   + + +   A+ LF  M+    +  + T+V +L
Sbjct: 321 HVDVARSLFDEM-EVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLL 379

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            ACA +GA  +G+ +H  + +  +E+++ +   L+ MY +  +++ AT VF  M   ++ 
Sbjct: 380 TACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVH 439

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +W +MI+   GL         FN M  + ++            HF    YQ        M
Sbjct: 440 TWTAMIA---GLA--------FNGMGKAALE------------HF----YQ--------M 464

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS----LMDMYVK 579
           +  GF+PN  S   VL A +   LL  GR    Y     + Y+++        ++D+  +
Sbjct: 465 RCDGFQPNSVSYIAVLTACSHSCLLNEGRL---YFDEMRILYNIHPQIEHYGCMIDLLGR 521

Query: 580 NDCLQNAQEVFDNMK-NRNIVAWNSLISG 607
           +  L  A ++   M    N V W S++S 
Sbjct: 522 SGLLDEAMDLVKTMPIQPNAVIWASILSA 550


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/660 (33%), Positives = 347/660 (52%), Gaps = 48/660 (7%)

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            S ++ N+   NS+I+ Y     + +A  LF++M+       ++++N L+ G+   G +  
Sbjct: 49   SYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLR----SVVSYNVLMGGYLHSGEHLE 104

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            V+ L + M S  ++PN    + VL A      +  G + HG++ + GL +  +V +SL+ 
Sbjct: 105  VVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVH 164

Query: 576  MYVK----NDCLQNAQEVFDNMKNRN-IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
            MY K    +  LQ  +    N+ N N    +NS+++     G    A ++L +M +E + 
Sbjct: 165  MYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVV 224

Query: 631  PDLVSWNS-----------------------------------LVSGYSIWGQSKEALVI 655
             D V++ S                                   LV  +   G    A  +
Sbjct: 225  WDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKV 284

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
               ++N     NVV WTSL++  LQN  + E+L     M +E    N  T + LL    G
Sbjct: 285  FDGLQNR----NVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAG 340

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            +  L++G  +H    K G      V   LI+MYSK G + S+ +VF    N+ + +WN M
Sbjct: 341  MAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAM 400

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I G++ +G GK+A+LLF ++L  G  P+ +TF  +L+AC +  LV EG+ Y + +   + 
Sbjct: 401  ICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFK 460

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            + P +EHY+C+V +L +AG L+EA +F+RT   K D   W  LL +C IH +       +
Sbjct: 461  VEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIA 520

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
              + +++P +   Y L+ N+ A +  W+ V  +R  M E  VK     SWI+I   VHVF
Sbjct: 521  ETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVF 580

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
            S++G+ HP   +IY ++  L+  +K+LGYVP+   V  D+++E+K   L  H+EKLAI Y
Sbjct: 581  SSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAY 640

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GLMK  S APIRVIKN R+C DCHTA K +S V  R I +RD +RFHHFR+G C+C D W
Sbjct: 641  GLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 221/528 (41%), Gaps = 100/528 (18%)

Query: 312 LGVEVHASLIKRG--------FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
            G  +H  L+ R          +F++    +L+N Y KC  +  A  LF E+S L   + 
Sbjct: 30  FGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS-LRSVVS 88

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           +N ++   L + +    +KLF+ M  S  +        +L ACA  G   EG Q HG++ 
Sbjct: 89  YNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLF 148

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSM-----KDHNLSSWNSMISSYTGLGYV 478
           K  L  +  V + L+ MYS+   ++LA +V +S       D++   +NS++++    G +
Sbjct: 149 KFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRL 208

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
             A  +  +M    +  D +T             Y +V+ L   ++ LG           
Sbjct: 209 GEAVEVLGRMVDEGVVWDSVT-------------YVSVMGLCGQIRDLGL---------- 245

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
                       G + H  +L+ GL +D++VG+ L+DM+ K   + +A++VFD ++NRN+
Sbjct: 246 ------------GLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNV 293

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEE------------------------------- 627
           V W SL++ Y   G F     +L+ M+ E                               
Sbjct: 294 VVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHAR 353

Query: 628 ----EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                IK  ++  N+L++ YS  G    +  +   M+N     +++TW ++I G  Q+  
Sbjct: 354 VEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNR----DIITWNAMICGYSQHGL 409

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
            +++L  F  M      PN  T   +L  C  L L+  G         N  +K   V  G
Sbjct: 410 GKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEG-----FYYLNQLMKHFKVEPG 464

Query: 744 L------IDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGN 784
           L      + +  ++G L+ A    R +  K  + +W  ++    I+ N
Sbjct: 465 LEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRN 512



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 188/423 (44%), Gaps = 43/423 (10%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF-SE 354
           + T +L  C      + G++ H  L K G  F   +K +L++ Y KC  V+ A ++  SE
Sbjct: 123 VFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESE 182

Query: 355 VSDLEDD---LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
             ++++D     +N ++   + + +   A+++   M        S T V ++  C ++  
Sbjct: 183 HGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRD 242

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G Q+H  +LK  L  ++ V + L+ M+ +   +  A +VFD +++ N+  W S++++
Sbjct: 243 LGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTA 302

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y                                     +G ++  L LL  M   G   N
Sbjct: 303 Y-----------------------------------LQNGEFEETLNLLSCMDREGTMSN 327

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             + +V+L A   +  L++G   H  + + G+   + VG +L++MY K  C+ ++ +VF 
Sbjct: 328 EFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFF 387

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
           +M+NR+I+ WN++I GY   GL   A  +   M      P+ V++  ++S  +      E
Sbjct: 388 DMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNE 447

Query: 652 ALVIIHH-MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
               ++  MK+  + P +  +T +++   +     E+  F   M+   +K +      LL
Sbjct: 448 GFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENF---MRTTQVKWDVVAWRVLL 504

Query: 711 QTC 713
             C
Sbjct: 505 NAC 507



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 125/234 (53%), Gaps = 1/234 (0%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G + E +EV G +  +GV++ S     ++ LC ++    LG++VHA L+K G  FDV + 
Sbjct: 206 GRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVG 265

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L++ +GKC DV SA K+F  + +  + ++W  ++   L+N ++E  + L   M     
Sbjct: 266 SMLVDMFGKCGDVLSARKVFDGLQN-RNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGT 324

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
            +   T   +L A A + A   G  +H  V K  +++ + V N LI+MYS+   ++ +  
Sbjct: 325 MSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYD 384

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           VF  M++ ++ +WN+MI  Y+  G    A  LF  M S+   P+ +T+  +LS 
Sbjct: 385 VFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSA 438


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/707 (30%), Positives = 368/707 (52%), Gaps = 77/707 (10%)

Query: 406  CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            C++ G    G+ +H   +   L S + V N L+SMYS+  ++  A RVFD  ++ +  SW
Sbjct: 119  CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            NS++S Y   G  +    +F  M                      G   N   L   ++ 
Sbjct: 179  NSLVSGYVRAGAREEMVRVFAMMRRG-------------------GMGLNSFALGSVIKC 219

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
               R +G+              +      HG +++ GLD D+++ ++++DMY K   L  
Sbjct: 220  CSGRGDGT--------------MDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVE 265

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCF------KGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
            A  +F +++  N+V +N++I+G+C       K +   A  + ++++   ++P   +++S+
Sbjct: 266  AAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSV 325

Query: 640  -----VSGYSIWGQSKEALVIIHHMK--------------NSGIYP------------NV 668
                 ++GY  +G+     VI +  +              NSG               ++
Sbjct: 326  LRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDI 385

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            VTWT+++SG +QNE + ++L  F +     +KP+  T+SS++  C  L + + G++I C 
Sbjct: 386  VTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCF 445

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
              K+GF +   +    + MY++SG++ +A   F++  +  + SW+ +I   A +G  ++A
Sbjct: 446  ATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDA 505

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +  F E+++    P+ ITF  +L AC + GLV+EG +Y+++M+ DY + PTI+H +C+VD
Sbjct: 506  LHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVD 565

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG L +A  FI    F  D  IW +LL SCRIH  LE  ++ + R+ +LEP +SA+
Sbjct: 566  LLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSAS 625

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y ++ N+   +       + R  M + GVK     SWI++   VH F A    HP +  I
Sbjct: 626  YVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAI 685

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y +L  ++S ++KL    DT     +I + E+  ++  H+EKLA+  G++     APIRV
Sbjct: 686  YTKLEEMLSRIEKLA-TTDT-----EISKREQ-NLMNCHSEKLAVALGMIHLPQSAPIRV 738

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +KN RVC DCH+  K +S    REI LRD  RFHHFR+G CSC D W
Sbjct: 739  MKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/494 (22%), Positives = 217/494 (43%), Gaps = 76/494 (15%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C++      G  VHA  I  G    V +  +L++ Y KC ++  A ++F +V++  DD+ 
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF-DVAEERDDVS 177

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG--AFHEGKQIHGY 421
           WN ++   +R    E  +++F  M+       S  +  +++ C+  G       + +HG 
Sbjct: 178 WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGC 237

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY------TGL 475
           V+K+ L+S++ + + +I MY++   L  A  +F S+++ N+  +N+MI+ +       G 
Sbjct: 238 VIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGK 297

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                A +L++++ S                              RGMQ     P   + 
Sbjct: 298 EVASEALTLYSEVQS------------------------------RGMQ-----PTEFTF 322

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           S VL+A      L++G++ HG +++     D ++G++L+D+Y  + C+++    F +   
Sbjct: 323 SSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPK 382

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            +IV W +++SG     L   A  + ++     +KPDL + +S+++  +    ++    I
Sbjct: 383 HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442

Query: 656 -------------------IHHMKNSGIYP------------NVVTWTSLISGSLQNENY 684
                              +H    SG               +VV+W+++IS   Q+   
Sbjct: 443 QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCA 502

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVATG 743
           R++L FF +M    + PN  T   +L  C   GL+  G   +    K+ G        T 
Sbjct: 503 RDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTC 562

Query: 744 LIDMYSKSGNLKSA 757
           ++D+  ++G L  A
Sbjct: 563 VVDLLGRAGRLADA 576



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 200/497 (40%), Gaps = 88/497 (17%)

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L++ Y R      A R+ D M   N  S+N +I +Y+  G   ++     +   + + 
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106

Query: 495 PDIITW-----NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
            D  ++      C  +GH   G   + L +L                             
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAIL----------------------------- 137

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
                      +GL   ++V  SL+ MY K   +  A+ VFD  + R+ V+WNSL+SGY 
Sbjct: 138 -----------DGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYV 186

Query: 610 FKGL---FVNAKKMLNQ------------------------MEEEE------IKPDLVSW 636
             G     V    M+ +                        M+  E      IK  L S 
Sbjct: 187 RAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSD 246

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY------RESLKF 690
             LVS        K ALV    +  S   PNVV + ++I+G  + E         E+L  
Sbjct: 247 VFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTL 306

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
           + ++Q   ++P   T SS+L+ C   G L+ GK+IH   +K  F +D ++ + LID+Y  
Sbjct: 307 YSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFN 366

Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
           SG ++     FR S    + +W  M+ G       ++A+ LFHE L  G +PD  T +++
Sbjct: 367 SGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSV 426

Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIP-TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           + AC +  +   G +     +T       T+   SC V +  ++G +D A    + M   
Sbjct: 427 MNACASLAVARAG-EQIQCFATKSGFDRFTVMGNSC-VHMYARSGDVDAATRRFQEME-S 483

Query: 870 PDATIWGALLGSCRIHG 886
            D   W A++     HG
Sbjct: 484 HDVVSWSAVISCHAQHG 500



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 199/453 (43%), Gaps = 46/453 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y + G+   A + F +   R    W+S +  Y   G   +E++ V+  +   G+ 
Sbjct: 149 SLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAR-EEMVRVFAMMRRGGMG 207

Query: 292 FRSRILTIILKLCTKLMAFWLGV--EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
             S  L  ++K C+      + +   VH  +IK G D DV L  A+++ Y K   +  A 
Sbjct: 208 LNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAA 267

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEK------WENAIKLFREMQFSSAKAISRTIVKML 403
            LF  V +  + +++N +I    R E          A+ L+ E+Q    +    T   +L
Sbjct: 268 ALFRSVQE-PNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVL 326

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +AC   G    GKQIHG V+K   + +  + + LI +Y  +  +E   R F S   H++ 
Sbjct: 327 RACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIV 386

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +W +M+S        + A SLF++   + ++PD+ T                        
Sbjct: 387 TWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFT------------------------ 422

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                      +S V+ A   L + + G +   +  ++G D    +G S + MY ++  +
Sbjct: 423 -----------ISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDV 471

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             A   F  M++ ++V+W+++IS +   G   +A    ++M + ++ P+ +++  +++  
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 644 SIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLI 675
           S  G   E L     M K+ G+ P +   T ++
Sbjct: 532 SHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVV 564



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 49/359 (13%)

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           L++  +L+  Y +      A+ + D M  RN V++N LI  Y  +GL   + + L +   
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 627 EEIKPDLVSW-----------------------------------NSLVSGYSIWGQSKE 651
             +  D  S+                                   NSLVS YS  G+  E
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           A  +    +      + V+W SL+SG ++     E ++ F  M++  +  NS  + S+++
Sbjct: 163 ARRVFDVAEER----DDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218

Query: 712 TCGGL--GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            C G   G +   + +H   +K G   D ++ + +IDMY+K G L  A  +FR      +
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNV 278

Query: 770 ASWNCMIMGF----AIYGN--GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
             +N MI GF     + G     EA+ L+ E+   G QP   TF+++L AC  +G +E G
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            K        Y         S ++DL   +G +++ +   R+ P K D   W A++  C
Sbjct: 339 -KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSP-KHDIVTWTAMVSGC 395



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 16/307 (5%)

Query: 214 HAQMIKMGKIWNSDD-MVKSLIFHYLEFGDFTSAAKAF-------FLYFSRSYADWSSFL 265
           H  +IK G   +SD  +V ++I  Y + G    AA  F        + F+   A    F 
Sbjct: 235 HGCVIKAG--LDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIA---GFC 289

Query: 266 EDYESFGGEV-QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
                 G EV  E L ++ E+  +G+       + +L+ C        G ++H  +IK  
Sbjct: 290 RTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYT 349

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F  D  +  AL++ Y     +E   + F   S   D + W  ++   ++NE  E A+ LF
Sbjct: 350 FQEDDFIGSALIDLYFNSGCMEDGFRCFRS-SPKHDIVTWTAMVSGCVQNELHEKALSLF 408

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            E   +  K    TI  ++ ACA +     G+QI  +  KS  +    + N  + MY+R+
Sbjct: 409 HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARS 468

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             ++ ATR F  M+ H++ SW+++IS +   G    A   F++M  +++ P+ IT+  +L
Sbjct: 469 GDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528

Query: 505 SGHFTHG 511
           +   +HG
Sbjct: 529 TA-CSHG 534



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/334 (20%), Positives = 136/334 (40%), Gaps = 72/334 (21%)

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
           N+L++ YC  G  + A+++L++M     + + VS+N L+  YS  G +  +L  +   + 
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEMP----RRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
           +G+  +  ++ + +                                     C   G L+ 
Sbjct: 103 AGVDVDRFSYAAAL-----------------------------------AACSRAGHLRA 127

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           G+ +H L + +G     +V+  L+ MYSK G +  AR VF  +  +   SWN ++ G+  
Sbjct: 128 GRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVR 187

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG-----LVE--EGWKYFDSMSTDY 834
            G  +E + +F  +   G   ++    +++  C   G     + E   G      + +D 
Sbjct: 188 AGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDV 247

Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL-GSCRIHGHLE---- 889
            ++      S M+D+  K G L EA    R++  +P+  ++  ++ G CR    +     
Sbjct: 248 FLV------SAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNTMIAGFCRTETVIGKEVA 300

Query: 890 ------YAEIASRRLFK--------LEPCNSANY 909
                 Y+E+ SR +          L  CN A Y
Sbjct: 301 SEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGY 334


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/611 (35%), Positives = 325/611 (53%), Gaps = 44/611 (7%)

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
            WN LLS H   G+    L + R + S   RPN ++ ++ L A   L  L           
Sbjct: 76   WNGLLSAHSRAGAPGAALRVFRALPS-SARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
              G  +D++V ++L+ +Y +   ++ A  VFD M  ++ VAW+++++G+   G  V A  
Sbjct: 135  AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 620  MLNQMEEEEI-----------------------------------KPDLVSWNSLVSGYS 644
            M ++M E  +                                   + D+V+  SLVS Y+
Sbjct: 195  MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G    A  +   M     Y N VTW++LISG  QN    E+L  F ++Q + ++P S 
Sbjct: 255  KNGHLDVACQVFRMMP----YRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSW 310

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
             + S L  C  +G L+ GK IH   L+        + T ++DMYSK G+L+SAR++F K 
Sbjct: 311  ALVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKL 369

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
            +++ L  WN +I     +G G +A+ LF EL ETG +PD  TF +LL+A  +SGLVEEG 
Sbjct: 370  SSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 429

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
             +FD M  ++ I P  +HY C+VDLL ++G ++EA D + +M  +P   IW  LL  C  
Sbjct: 430  FWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLN 489

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            +  LE  E  ++++ +L P +     L+ NL A + +W+ V  +R  M + G K V  +S
Sbjct: 490  NKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYS 549

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
             I++    H F  E   HP   EI   +  L SEM+KLGYVP T  VY D+DE++   +L
Sbjct: 550  LIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQ---LL 606

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+E+LAI +GL+ T     + +IKN RVC DCH A KY+S +  REI +RD  RFHHF
Sbjct: 607  SYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHF 666

Query: 1065 REGECSCNDCW 1075
            ++G CSC D W
Sbjct: 667  KDGACSCGDYW 677



 Score =  141 bits (355), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 198/442 (44%), Gaps = 73/442 (16%)

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           S   T+ L  C +L        V       G+  DV +  AL++ Y +C  +E A ++F 
Sbjct: 107 STTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFD 166

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
            +   +D + W+ ++   +   +   A+ ++  M+          +V ++QAC   G   
Sbjct: 167 GMPR-KDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNAR 225

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G  +HG +L+  +  ++     L+SMY++N  L++A +VF  M   N  +W+++IS + 
Sbjct: 226 IGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFA 285

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
             G    A  LF ++ +  +QP   +W               +++ L    S+GF     
Sbjct: 286 QNGRAVEALDLFRELQADGLQP--CSW--------------ALVSALLACASVGF----- 324

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
                         LK G+  HG+ILR  L++   +GT+++DMY K   L++A+++F+ +
Sbjct: 325 --------------LKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKL 369

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA- 652
            +R++V WN++I+     G   +A  +  ++ E  IKPD  ++ SL+S  S  G  +E  
Sbjct: 370 SSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 429

Query: 653 -------------------LVIIHHMKNSGIY-------------PNVVTWTSLISGSLQ 680
                              + I+  +  SG+              P +  W  L+SG L 
Sbjct: 430 FWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLN 489

Query: 681 NENYR--ESL-KFFIQMQQEDI 699
           N+     E++ K  ++++ EDI
Sbjct: 490 NKKLELGETIAKKILELRPEDI 511



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 189/452 (41%), Gaps = 78/452 (17%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           WN ++    R      A+++FR +  SSA+  S T    L ACA++G     + +     
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALP-SSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            +    ++ VC+ L+ +YSR   +E A RVFD M                          
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMP------------------------- 169

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                     + D + W+ +++G  T G     L +   M+  G   +   +  V+QA  
Sbjct: 170 ----------RKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACM 219

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
                + G   HG +LR+ +  D+   TSL+ MY KN  L  A +VF  M  RN V W++
Sbjct: 220 STGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSA 279

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS--------GYSIWGQSKEALVI 655
           LISG+   G  V A  +  +++ + ++P   SW +LVS        G+   G+S    ++
Sbjct: 280 LISGFAQNGRAVEALDLFRELQADGLQP--CSW-ALVSALLACASVGFLKLGKSIHGFIL 336

Query: 656 -------------------------IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
                                       + N     ++V W ++I+    +    ++L  
Sbjct: 337 RRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALAL 396

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA---YVATGLIDM 747
           F ++ +  IKP+  T +SLL      GL++ GK      +K   I+ A   YV   ++D+
Sbjct: 397 FQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVC--IVDL 454

Query: 748 YSKSGNLKSAREVFRK-SANKTLASWNCMIMG 778
            ++SG ++ A ++        T+A W  ++ G
Sbjct: 455 LARSGLVEEANDMLASMQTEPTIAIWVILLSG 486


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
            [Vitis vinifera]
          Length = 788

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 231/737 (31%), Positives = 385/737 (52%), Gaps = 76/737 (10%)

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
            ++++ + K   +  A +LF  +    + + WN +I   L N++ E A +LF +M   +  
Sbjct: 51   SMISAFAKNGRISDARQLFDGMPQ-RNIVSWNSMIAAYLHNDRVEEARQLFDKM--PTRD 107

Query: 394  AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
              S T+  M+    + G   + + +   +     + N   CN +++ Y++N + + A R+
Sbjct: 108  LYSWTL--MITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRL 162

Query: 454  FDSMKDHNLSSWNSMISSYT-------GL-------------------GYVDV-----AW 482
            FD+M   +L SWNSM++ YT       GL                   G+V+V     +W
Sbjct: 163  FDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSW 222

Query: 483  SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ-- 540
              F K+ +    P+ ++W  +L G    G       L   M         + ++  +Q  
Sbjct: 223  EFFEKIPN----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNC 278

Query: 541  ----------AVTELRLLKYGRESHGYILRNGLD-----------YDLYVGTSLMDMYVK 579
                       + E   + +    +GY+    LD            ++   T+++  YV+
Sbjct: 279  HVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQ 338

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
            N  + +A+++F+ +  R++V WN++I+GY   G    A  +  QM    +K D+VSWN++
Sbjct: 339  NKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM----VKKDIVSWNTM 394

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            V+ Y+  GQ   A+ I   MK      N+V+W SLISG  QN +Y ++LK F+ M  E  
Sbjct: 395  VASYAQVGQMDAAIKIFEEMKEK----NIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQ 450

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            KP+ +T +  L +C  L  LQ GK++H L +K+G+  D +V+  LI MY+K G++ SA  
Sbjct: 451  KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAEL 510

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            +F+   +  + SWN +I  +A+ GNG+EA+ LFH++   G  PD +TF  +L+AC + GL
Sbjct: 511  LFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGL 570

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            +++G K F  M   YNI P  EHY+CMVDLLG+AG L+EA+  +R M    +A IWGALL
Sbjct: 571  IDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALL 630

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
            G+CRIHG+LE A+ A+ +L + EP  ++NY L+ N+ A + RW++V R+R  M E G + 
Sbjct: 631  GACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEK 690

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD--TRCVYQDIDE 997
               WSWI++   VH F +E   HP   E+   L  L + M+     P    +   +++  
Sbjct: 691  QPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTAKCPPYLRKTGSEELLA 750

Query: 998  EEKGKVLLSHTEKLAIV 1014
            E K  +LL++   L++V
Sbjct: 751  EWKHMLLLTNFPVLSLV 767



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 105/464 (22%), Positives = 219/464 (47%), Gaps = 39/464 (8%)

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           V +     N    N +IS +++N ++  A ++FD M   N+ SWNSMI++Y     V+ A
Sbjct: 37  VFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEA 96

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             LF+KM +     D+ +W  +++ +  +G       L      L ++ N    + ++  
Sbjct: 97  RQLFDKMPTR----DLYSWTLMITCYTRNGELAKARNLF---NLLPYKWNPVCCNAMVAG 149

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
             + R     R     +       DL    S++  Y +N  ++   + F+ M  R++V+W
Sbjct: 150 YAKNRQFDEARR----LFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSW 205

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
           N ++ G+   G   ++ +   ++      P+ VSW +++ G++ +G+  EA  +   M  
Sbjct: 206 NLMVDGFVEVGDLNSSWEFFEKIP----NPNTVSWVTMLCGFARFGKIAEARRLFDQMP- 260

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                NVV W ++I+  +QN +  E++  F++M ++    NS + ++++     +G L  
Sbjct: 261 ---IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK----NSISWTTVINGYVRMGKLDE 313

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            +++    L     ++    T +I  Y ++  +  AR++F + + + +  WN MI G++ 
Sbjct: 314 ARQL----LNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQ 369

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            G   EA+ LF +++    + D +++  ++A+    G ++   K F+ M  + NI+    
Sbjct: 370 CGRMDEALHLFKQMV----KKDIVSWNTMVASYAQVGQMDAAIKIFEEMK-EKNIVS--- 421

Query: 842 HYSCMVDLLGKAG-YLDEAWDFIRT--MPFKPDATIWGALLGSC 882
            ++ ++  L + G YLD    F+       KPD + +   L SC
Sbjct: 422 -WNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSC 464



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 121/269 (44%), Gaps = 11/269 (4%)

Query: 216 QMIKMGKI-WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
           QM+K   + WN+      ++  Y + G   +A K F     ++   W+S +       G 
Sbjct: 382 QMVKKDIVSWNT------MVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQ-NGS 434

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
             + L+ +  +  +G           L  C  L A  +G ++H  ++K G+  D+ +  A
Sbjct: 435 YLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNA 494

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L+  Y KC  + SA  LF ++ D  D + WN +I     N     A+KLF +M+      
Sbjct: 495 LITMYAKCGSISSAELLFKDI-DHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAP 553

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRV 453
              T V +L AC+ VG   +G ++   ++++  +E       C++ +  R  +LE A ++
Sbjct: 554 DEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQL 613

Query: 454 FDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
              MK + N   W +++ +    G +++A
Sbjct: 614 VRGMKINANAGIWGALLGACRIHGNLELA 642


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Brachypodium distachyon]
          Length = 689

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/620 (33%), Positives = 326/620 (52%), Gaps = 43/620 (6%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT--ELRLLKYGR 552
            P ++++   +SG   H      L+    M  +G RPN  +     +A      R    G 
Sbjct: 74   PTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGP 133

Query: 553  ESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            + H   LR G L  D +V  + MDMY K  CL  A+ +F+ M NRN++AWN++++     
Sbjct: 134  QIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVID 193

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSW----------------------------------- 636
            G  +   K    + E    P++VS                                    
Sbjct: 194  GRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVS 253

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
            N++V  Y     + +A  +   M+      N V+W S+I    Q+    ++L  ++  + 
Sbjct: 254  NAMVDFYGKCRCAGKARAVFDGMRVR----NSVSWCSMIVAYAQHGAEEDALAVYMGARN 309

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
               +P    +SS+L TC GL  L  G+ +H + +++    + +VA+ L+DMY K G ++ 
Sbjct: 310  TGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVED 369

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFTALLAACK 815
            A +VF     + L +WN MI G+A  G+ + A+ +F  ++ +G   P+ IT   ++ AC 
Sbjct: 370  AEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACS 429

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
              GL ++G++ FD+M   + + P  EHY+C+VDLLG+AG  + A++ I+ MP +P  ++W
Sbjct: 430  RGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVW 489

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
            GALLG+C++HG  E   IAS +LF+L+P +S N+ L+ N+LA + RW +   +R  M  V
Sbjct: 490  GALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNV 549

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            G+K     SWI    +VHVF A+   H    EI   L  L  +M+  GY+PDT+    D+
Sbjct: 550  GIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDV 609

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            +EEEK   +  H+EKLA+ +GL+      PIR+ KN R+C DCH A K++S + GREI +
Sbjct: 610  EEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIV 669

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFH+F++ ECSC D W
Sbjct: 670  RDNNRFHYFKQFECSCKDYW 689



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 185/415 (44%), Gaps = 42/415 (10%)

Query: 312 LGVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
           +G ++HA  ++ G+   D  + CA M+ Y K   +  A +LF E+ +  + + WN ++  
Sbjct: 131 VGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPN-RNVIAWNAVMTN 189

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
            + + +     K +  ++ +       ++     ACA       G+Q HG+V+    + +
Sbjct: 190 AVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMD 249

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           +SV N ++  Y +      A  VFD M+  N  SW SMI +Y                  
Sbjct: 250 VSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYA----------------- 292

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                              HG+ ++ L +  G ++ G  P    VS VL     L  L +
Sbjct: 293 ------------------QHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNF 334

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           GR  H   +R+ +D +++V ++L+DMY K   +++A++VF +M  RN+V WN++I GY  
Sbjct: 335 GRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAH 394

Query: 611 KGLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNV 668
            G   NA  + + M       P+ ++  ++++  S  G +K+   +   M+   G+ P  
Sbjct: 395 IGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRT 454

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             +  ++   L      E   + I +Q+  ++P+ +   +LL  C   G  + G+
Sbjct: 455 EHYACVV--DLLGRAGMEERAYEI-IQRMPMRPSISVWGALLGACKMHGKTELGR 506



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/480 (21%), Positives = 201/480 (41%), Gaps = 49/480 (10%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           RC +     HA  ++ G +     +  + +  Y + G    A + F    +R+   W++ 
Sbjct: 127 RCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAV 186

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           + +     G   E  + +  L   G +     +      C   M   LG + H  ++  G
Sbjct: 187 MTN-AVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCG 245

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           FD DV +  A+++FYGKCR    A  +F  +  + + + W  +I+   ++   E+A+ ++
Sbjct: 246 FDMDVSVSNAMVDFYGKCRCAGKARAVFDGMR-VRNSVSWCSMIVAYAQHGAEEDALAVY 304

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
              + +  +     +  +L  CA +   + G+ +H   ++S +++N+ V + L+ MY + 
Sbjct: 305 MGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKC 364

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +E A +VF  M + NL +WN+MI  Y  +G    A ++F+ M                
Sbjct: 365 GGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAM---------------- 408

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL-RNGL 563
                             ++S G  PN  ++  V+ A +   L K G E    +  R G+
Sbjct: 409 ------------------IRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGV 450

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKG---LFVNAKK 619
           +        ++D+  +    + A E+   M  R +I  W +L+      G   L   A +
Sbjct: 451 EPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASE 510

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY--PNV--VTWTSLI 675
            L +++ ++    ++  N L S     G+  EA  +   MKN GI   P    +TW +++
Sbjct: 511 KLFELDPQDSGNHVLLSNMLASA----GRWAEATDVRKEMKNVGIKKEPGCSWITWKNVV 566



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/432 (21%), Positives = 161/432 (37%), Gaps = 78/432 (18%)

Query: 405 ACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           ACA       G QIH   L+   L  +  V    + MY +   L LA R+F+ M + N  
Sbjct: 122 ACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRN-- 179

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                                            +I WN +++     G          G+
Sbjct: 180 ---------------------------------VIAWNAVMTNAVIDGRPLETFKAYFGL 206

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
           +  G  PN  SV     A      L  G + HG+++  G D D+ V  +++D Y K  C 
Sbjct: 207 REAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCA 266

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGY----------------------------------C 609
             A+ VFD M+ RN V+W S+I  Y                                  C
Sbjct: 267 GKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTC 326

Query: 610 FKGLFVNAKKMLNQMEEEE-IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
              L +N  + L+ +     I  ++   ++LV  Y   G  ++A  +   M       N+
Sbjct: 327 AGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPER----NL 382

Query: 669 VTWTSLISGSLQNENYRESLKFFIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-H 726
           VTW ++I G     + + +L  F  M +     PN  T+ +++  C   GL ++G E+  
Sbjct: 383 VTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFD 442

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNG 785
            +  + G          ++D+  ++G  + A E+  R     +++ W  ++    ++G  
Sbjct: 443 TMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKT 502

Query: 786 KEAILLFHELLE 797
           +   +   +L E
Sbjct: 503 ELGRIASEKLFE 514


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/645 (32%), Positives = 333/645 (51%), Gaps = 69/645 (10%)

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
             W  ++SG    G + + +     M  +     PN   ++ VL+    L  ++ GR  HG
Sbjct: 91   AWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHG 150

Query: 557  YILRNGLDYDLYVGTSLMDMYVK--------------------------NDCLQN----- 585
            +ILR+G+  D+ +  +++DMY K                            CLQ+     
Sbjct: 151  WILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVG 210

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI---------------- 629
            A ++FD    R++ +WN+++SG    G    A   L QM    +                
Sbjct: 211  ATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGL 270

Query: 630  -------------------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                               + D     SL+  Y   G+ + AL I     +         
Sbjct: 271  LSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDF-TEDRQFA 329

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            W+++++G +QN    E+L+FF +M +E +      ++S+   C   G+++ G+++H    
Sbjct: 330  WSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVE 389

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
            K G   DA +A+ ++DMYSKSG+L+ A  +FR +  K +A W  M+  +A +G G+ A+ 
Sbjct: 390  KLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALE 449

Query: 791  LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
            +F  +      P+ IT  A+L+AC +SGLV +G+ YF+ M  +Y I+P  EHY+CMVDL 
Sbjct: 450  IFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLY 509

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG LD+A +FI       +A +W  LL +CR+H H+EYA++AS +L +LE  ++ +Y 
Sbjct: 510  GRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYV 569

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            LM N+ A +N+W D  +LR SM E  V+     SWI +  +VH F A    HP + EIY 
Sbjct: 570  LMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYA 629

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L+  +K++GY   T  V  DI+EE++   L  H+EKLAI +G++ T     +R+ K
Sbjct: 630  YLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFK 689

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH A K+++    REI +RD  RFHHF++G+CSC D W
Sbjct: 690  NLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 3/271 (1%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           L+ GD   A + F     R  + W++ +      G    E L    ++   GV F +   
Sbjct: 203 LQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHG-HTTEALGRLQQMVRAGVTFSNYTY 261

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           +++  L   L +  LG ++H  ++    + D  + C+LM+ Y KC ++ESA  +F   SD
Sbjct: 262 SMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSD 321

Query: 358 LEDD--LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
             +D    W+ ++   ++N + E A++ FR M      A    +  +  ACA  G   +G
Sbjct: 322 FTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQG 381

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +Q+HG+V K     +  + + ++ MYS++  LE A R+F S +  N++ W +M+ SY   
Sbjct: 382 RQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASH 441

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           G   +A  +F++M + +I P+ IT   +LS 
Sbjct: 442 GQGRMALEIFSRMKAEKIMPNEITLVAVLSA 472



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 175/415 (42%), Gaps = 71/415 (17%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           +L  +L+ C  L     G  +H  +++ G   DV L  A+++ Y KC D   A + F  +
Sbjct: 128 VLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAM 187

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS--RTIVK------------ 401
           +  +D   WN +I   L++     A +LF E   SS + +S   TIV             
Sbjct: 188 AQ-KDATSWNIVIRACLQDGDLVGATQLFDE---SSLRDVSSWNTIVSGLMRHGHTTEAL 243

Query: 402 -MLQACAKVGAFHE-------------------GKQIHGYVLKSALESNLSVCNCLISMY 441
             LQ   + G                       G+Q+HG V+ + LE +  V   L+ MY
Sbjct: 244 GRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMY 303

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            +  ++E A  +FD                          WS F +            W+
Sbjct: 304 CKCGEMESALSIFDR-------------------------WSDFTEDRQ-------FAWS 331

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
            +++G+  +G  +  L   R M   G       ++ V  A     +++ GR+ HG++ + 
Sbjct: 332 TMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKL 391

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
           G  +D  + ++++DMY K+  L++A  +F + + +N+  W +++  Y   G    A ++ 
Sbjct: 392 GHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIF 451

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLI 675
           ++M+ E+I P+ ++  +++S  S  G   +     + M+   GI PN   +  ++
Sbjct: 452 SRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMV 506



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 159/388 (40%), Gaps = 82/388 (21%)

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE--------------- 627
           L NA  VFD    R++ AW S+ISG   +G   +  +   +M +E               
Sbjct: 74  LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133

Query: 628 ----------------------EIKPDLVSWNSLVSGYSIWGQSKEA------------- 652
                                  + PD+V  N+++  Y+  G    A             
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193

Query: 653 --------------LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
                         LV    + +     +V +W +++SG +++ +  E+L    QM +  
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAG 253

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           +  ++ T S +    G L     G+++H   +     +DA+V   L+DMY K G ++SA 
Sbjct: 254 VTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESAL 313

Query: 759 EVFRKSANKTLA---SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            +F + ++ T     +W+ M+ G+   G  +EA+  F  +L  G        T++ +AC 
Sbjct: 314 SIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACA 373

Query: 816 NSGLVEEGWKYFDSMSTDYNIIPTIEHY------SCMVDLLGKAGYLDEAWDFIRTMPFK 869
           N+G+VE+G +        +  +  + H       S +VD+  K+G L++A    R+   K
Sbjct: 374 NAGMVEQGRQV-------HGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTK 426

Query: 870 PDATIWGALLGSCRIHGHLEYA-EIASR 896
            +  +W  +L S   HG    A EI SR
Sbjct: 427 -NVALWTTMLCSYASHGQGRMALEIFSR 453


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Brachypodium distachyon]
          Length = 637

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/574 (35%), Positives = 309/574 (53%), Gaps = 40/574 (6%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            VLQ+    R L  GR+ HG +L +GL  D  + T L+D+Y     + +A+ +FD M  RN
Sbjct: 68   VLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRN 127

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN-------------------- 637
            +  WN LI  Y   G    A ++   M +  ++PD  ++                     
Sbjct: 128  VFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHE 187

Query: 638  ---------------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                            LV  Y+  G   +A  +   ++      + V W S+I+   QN 
Sbjct: 188  RVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIR----VRDSVVWNSMIAAYGQNG 243

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               E+L     M    + P   T+ S +        L  G+E+H    + GF +   + T
Sbjct: 244  RPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT 303

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL-LETGFQ 801
             L+DMY+KSG ++ AR +F +   + L SWN MI G+ ++G+  EA+ LF+++ +E    
Sbjct: 304  SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVT 363

Query: 802  PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
            PD ITF  +L+AC + G+V+E  ++F  M   Y+I PT++H++C+VD+LG AG  +EA+D
Sbjct: 364  PDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYD 423

Query: 862  FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
             I+ MP +PD+ IWGALL  C+IH ++E  E+A ++L +LEP ++ NY L+ N+ A S +
Sbjct: 424  LIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGK 483

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            WE   R+R  M   G+K ++  SWI++    H F    A HP + EIY EL  L   M  
Sbjct: 484  WEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSD 543

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
             GY+PDT  V+ D+ ++EK  ++ SH+E+LAI +GL+ T S   + V KN RVC DCH  
Sbjct: 544  AGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVV 603

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             K +S +  REI +RD  R+HHF  GECSC D W
Sbjct: 604  IKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 215/477 (45%), Gaps = 48/477 (10%)

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           T +L+ C    +   G ++H  L+  G   D  L   L++ Y  C  V  A +LF  +  
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK 125

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
             +  LWN +I    R+   E AI+L+R M     +  + T    L+ACA +     G++
Sbjct: 126 -RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +H  VL +    ++ VC  L+ MY++                                G 
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAK-------------------------------CGC 213

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
           VD A ++F+++   R++ D + WN +++ +  +G     L+L R M + G  P  +++  
Sbjct: 214 VDDARAVFDRI---RVR-DSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVS 269

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            + A  +   L  GRE HG+  R G D    + TSL+DMY K+  +Q A+ +F+ +  R 
Sbjct: 270 TISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRE 329

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQME-EEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           +V+WN++I GY   G F  A K+ N+M  E ++ PD +++  ++S  +  G  KEA    
Sbjct: 330 LVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFF 389

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
             M +   I P V  +T L+        + E+      M    ++P+S    +LL  C  
Sbjct: 390 GLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMP---MQPDSGIWGALLNGCK- 445

Query: 716 LGLLQNGKEIHCLCLKNGF---IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
              +    E+  L L+       +DA     L ++Y++SG  + A  V +   N+ L
Sbjct: 446 ---IHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGL 499



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 15/188 (7%)

Query: 701 PNS-TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           PNS    +S+LQ+C     L  G+++H   L +G   D  +AT L+D+Y+  G +  AR 
Sbjct: 59  PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           +F     + +  WN +I  +A  G  + AI L+  +++ G +PD  T+   L AC     
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLD 178

Query: 820 VEEGWKYFDS-MSTDYNIIPTIEHYSC--MVDLLGKAGYLDEA---WDFIRTMPFKPDAT 873
           +E G +  +  + T +      + + C  +VD+  K G +D+A   +D IR      D+ 
Sbjct: 179 LETGREVHERVLGTHWG----EDMFVCAGLVDMYAKCGCVDDARAVFDRIRVR----DSV 230

Query: 874 IWGALLGS 881
           +W +++ +
Sbjct: 231 VWNSMIAA 238


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/570 (35%), Positives = 316/570 (55%), Gaps = 34/570 (5%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            ++ A  + + L   R  H ++ R+ L  D ++  SL+ MY K   + +A+ VFD M +R+
Sbjct: 66   IIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRD 125

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV------SGYSIWGQSKE 651
            +V+W  LI+GY    +   A  +L  M     +P+  ++ SL+       G SI G+   
Sbjct: 126  VVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSI-GEQMH 184

Query: 652  ALVIIHH--------------------------MKNSGIYPNVVTWTSLISGSLQNENYR 685
            AL + ++                          + +  +  N V+W +LI+G  +  +  
Sbjct: 185  ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGE 244

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
             +L  F +MQ+        T SS+      +G L+ G+ +H   +K+G    A+V   ++
Sbjct: 245  TTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTML 304

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
             MY+KSG++  AR+VF +   + L +WN M+   A YG GKEA+  F E+ + G Q + I
Sbjct: 305  GMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQI 364

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TF ++L AC + GLV+EG  YFD M  DYN+ P I+HY   VDLLG+AG L EA  F+  
Sbjct: 365  TFLSVLTACSHGGLVKEGKHYFDMMK-DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFK 423

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP +P A +WGALLG+CR+H + +  + A+  +F+L+P ++    L+ N+ A + +W D 
Sbjct: 424  MPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDA 483

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
             R+R  M   GVK     SW+QI+  VH+F A+   HP +G+IY     +   +KK GYV
Sbjct: 484  ARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYV 543

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
            P+T  V   I+E+E+   L  H+EK+A+ + L+   + A IR++KN R+C DCH+A KY+
Sbjct: 544  PNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYV 603

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S V  REI +RD  RFHHF EG CSC D W
Sbjct: 604  SKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 180/429 (41%), Gaps = 39/429 (9%)

Query: 285 LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           LH   +    R+   I+  C +         +HA L +     D  L  +L++ Y KC  
Sbjct: 51  LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGA 110

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           V  A  +F ++    D + W  +I    +N     AI L  +M  +  +    T   +L+
Sbjct: 111 VSDARHVFDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLK 169

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           A    G    G+Q+H   +K   + ++ V + L+ MY+R  ++++A  VFD +   N  S
Sbjct: 170 ATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVS 229

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           WN++I+ +                                         +  L     MQ
Sbjct: 230 WNALIAGFA-----------------------------------RKADGETTLMKFAEMQ 254

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
             GF     + S +  A   +  L+ GR  H +++++G     +VG +++ MY K+  + 
Sbjct: 255 RNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMV 314

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
           +A++VFD M  R++V WN++++     GL   A     ++ +  I+ + +++ S+++  S
Sbjct: 315 DARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACS 374

Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
             G  KE       MK+  + P +  + S +    +    +E+L F  +M  E   P + 
Sbjct: 375 HGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPME---PTAA 431

Query: 705 TMSSLLQTC 713
              +LL  C
Sbjct: 432 VWGALLGAC 440



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 165/356 (46%), Gaps = 42/356 (11%)

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           NS+I  Y   G V  A  +F+KM S     D+++W  L++G+  +      + LL  M  
Sbjct: 99  NSLIHMYCKCGAVSDARHVFDKMPSR----DVVSWTYLIAGYAQNYMPAEAIGLLPDMLR 154

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
             FRPNG + + +L+A         G + H   ++   D D+YVG++L+DMY + + +  
Sbjct: 155 ARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDM 214

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           A  VFD + ++N V+WN+LI+G+  K           +M+         +++S+ S ++ 
Sbjct: 215 AIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFAR 274

Query: 646 WGQSKEALVIIHHMKNS-------------GIYP------------------NVVTWTSL 674
            G  ++   +  H+  S             G+Y                   ++VTW ++
Sbjct: 275 IGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTM 334

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           ++   Q    +E++  F ++++  I+ N  T  S+L  C   GL++ GK    + +K+  
Sbjct: 335 LTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDM-MKDYN 393

Query: 735 IK---DAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGNGK 786
           ++   D YV+   +D+  ++G LK A   VF+     T A W  ++    ++ N K
Sbjct: 394 VQPEIDHYVS--FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 447



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 161/371 (43%), Gaps = 13/371 (3%)

Query: 146 YHHFNTRTSINQNRHSHKPNSITNSP-TSLALPPTDTLAKQAQLSCISSGFCFLNETNKF 204
           Y H  T        H   P S  +SP +S  L   D L               +    +F
Sbjct: 14  YIHRRTSKPYTSAAHRAVPISFPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQF 73

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           + L+  ++ HA + +   +     ++ SLI  Y + G  + A   F    SR    W+  
Sbjct: 74  KNLAGARAIHAHLSR-SCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYL 132

Query: 265 LEDYES--FGGEVQELLE--VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           +  Y       E   LL   +       G  F S     +LK         +G ++HA  
Sbjct: 133 IAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTS-----LLKATGACGGCSIGEQMHALA 187

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           +K  +D DV++  AL++ Y +C  ++ A  +F  +   ++++ WN +I    R    E  
Sbjct: 188 VKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS-KNEVSWNALIAGFARKADGETT 246

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           +  F EMQ +   A   T   M  A A++GA  +G+ +H +++KS  +    V N ++ M
Sbjct: 247 LMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGM 306

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y+++  +  A +VFD M   +L +WN+M+++    G    A + F ++    IQ + IT+
Sbjct: 307 YAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITF 366

Query: 501 NCLLSGHFTHG 511
             +L+   +HG
Sbjct: 367 LSVLTA-CSHG 376



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 2/187 (1%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           +   ++ P      S++  C     L   + IH    ++    DA++   LI MY K G 
Sbjct: 51  LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGA 110

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           +  AR VF K  ++ + SW  +I G+A      EAI L  ++L   F+P+  TFT+LL A
Sbjct: 111 VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 170

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
               G    G +   +++  YN    +   S ++D+  +   +D A      +  K + +
Sbjct: 171 TGACGGCSIG-EQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVS 229

Query: 874 IWGALLG 880
            W AL+ 
Sbjct: 230 -WNALIA 235


>gi|297848728|ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297338087|gb|EFH68504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 664

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/612 (35%), Positives = 333/612 (54%), Gaps = 17/612 (2%)

Query: 468  MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
            ++S  + L   D + S+F   NS    P    +N L+ G   +  ++  +     M +LG
Sbjct: 66   LVSCSSLLKSPDYSLSIFR--NSEERNP--FVFNALIRGLTENARFECSVRHFILMLTLG 121

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
             +P+  +   VL++ ++L     GR  H   L+N +D D +V  SL+DMY K   L +A 
Sbjct: 122  VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAF 181

Query: 588  EVF----DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            +VF    D +K  +I+ WN L++GYC       A  +   M E        SW++L+ GY
Sbjct: 182  QVFEETPDRIKKESILLWNVLVNGYCRAKDMQMATTLFRSMPERNSG----SWSTLIKGY 237

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
               G+   A  +   M       NVV+WT+LI+G  Q  +Y  ++  + +M ++ +KPN 
Sbjct: 238  VDNGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNE 293

Query: 704  TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             T++++L  C   G L +G  IH   L NG   D  + T L+DMY+K G +  A  VF  
Sbjct: 294  YTVAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSN 353

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +K + SW  MI G+A++G   +AI  F +++ +G +PD + F A+L AC NSG V+ G
Sbjct: 354  MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLG 413

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
              +FDSM  DY I PT++HY  +VDLLG+AG LDEA + +  MP  PD T W AL  +C+
Sbjct: 414  LNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLDEAHELVEYMPINPDLTTWAALYRACK 473

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
             H      +I  + L +L+P    +Y  +    A   +++DVE+ R S+ +   +  +  
Sbjct: 474  AHKS-NRTDIVLQNLLELDPELRGSYIFLDKTHAAKGKYQDVEKRRLSLQKKVKERSMGC 532

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S+I++D  ++ F+A+   H    EI  +L  ++S   + GY+P       DI+EEEK  V
Sbjct: 533  SYIELDCQLNKFAADDYTHKQAQEIRLKLEGIISLAIERGYIPGADWSIHDIEEEEKESV 592

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
               H+EKLA+  GL++T     IR+IKN R+C DCH+  KY+S +  R I LRD  +FHH
Sbjct: 593  TGIHSEKLALTLGLLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRGILLRDARQFHH 652

Query: 1064 FREGECSCNDCW 1075
            F++G CSC D W
Sbjct: 653  FKDGSCSCGDYW 664



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 153/315 (48%), Gaps = 8/315 (2%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           V ++   AK G  +   Q+         + ++ + N L++ Y R   +++AT +F SM +
Sbjct: 165 VSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLWNVLVNGYCRAKDMQMATTLFRSMPE 224

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            N  SW+++I  Y   G ++ A  LF  M     + ++++W  L++G    G Y+  ++ 
Sbjct: 225 RNSGSWSTLIKGYVDNGELNRAKQLFELMP----EKNVVSWTTLINGFSQTGDYETAIST 280

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M   G +PN  +V+ VL A ++   L  G   HGYIL NG+  D  +GTSL+DMY K
Sbjct: 281 YFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTSLLDMYAK 340

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
              +  A  VF NM +++I++W ++I G+   G F  A +   QM     KPD V + ++
Sbjct: 341 CGEVDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAV 400

Query: 640 VSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           ++     G+    L     M+ +  I P +  +  ++    +     E+ +    M    
Sbjct: 401 LTACLNSGEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLDEAHELVEYMP--- 457

Query: 699 IKPNSTTMSSLLQTC 713
           I P+ TT ++L + C
Sbjct: 458 INPDLTTWAALYRAC 472



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 113/239 (47%), Gaps = 4/239 (1%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y++ G+   A + F L   ++   W++ +  + S  G+ +  +  + E+  KG+ 
Sbjct: 232 TLIKGYVDNGELNRAKQLFELMPEKNVVSWTTLINGF-SQTGDYETAISTYFEMLEKGLK 290

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C+K  A   G+ +H  ++  G   D  +  +L++ Y KC +V+ A  +
Sbjct: 291 PNEYTVAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATV 350

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           FS ++  +D L W  +I     + ++  AI+ FR+M +S  K      + +L AC   G 
Sbjct: 351 FSNMNH-KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGE 409

Query: 412 FHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
              G      + L  A+E  L     ++ +  R  KL+ A  + + M  + +L++W ++
Sbjct: 410 VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLDEAHELVEYMPINPDLTTWAAL 468



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 117/291 (40%), Gaps = 67/291 (23%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY-------------------- 339
           +LK  +KL   WLG  +HA+ +K   D D  ++ +L++ Y                    
Sbjct: 132 VLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRI 191

Query: 340 -------------GKCR--DVESANKLFSEVSDLEDDLLWNEII--------------MV 370
                        G CR  D++ A  LF  + +  +   W+ +I              + 
Sbjct: 192 KKESILLWNVLVNGYCRAKDMQMATTLFRSMPE-RNSGSWSTLIKGYVDNGELNRAKQLF 250

Query: 371 KLRNEK-----------------WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           +L  EK                 +E AI  + EM     K    T+  +L AC+K GA  
Sbjct: 251 ELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALG 310

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G +IHGY+L + ++ + ++   L+ MY++  +++ A  VF +M   ++ SW +MI  + 
Sbjct: 311 SGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGWA 370

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
             G    A   F +M  S  +PD + +  +L+     G     L     M+
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMR 421



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 106/269 (39%), Gaps = 36/269 (13%)

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           P+ +   SL+ TC     L   + +H   L+ G +  + VA  L+   S   +   +  +
Sbjct: 27  PDESHFISLIHTCKDTVSL---RLVHAHILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSI 82

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
           FR S  +    +N +I G       + ++  F  +L  G +PD +TF  +L +    G  
Sbjct: 83  FRNSEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSKLGFR 142

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGA 877
             G     +   ++    +    S +VD+  K G L+ A+      P    K    +W  
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRVS-LVDMYAKTGQLNHAFQVFEETPDRIKKESILLWNV 201

Query: 878 LL-GSCR-------------------------IHGHLEYAEI-ASRRLFKLEP-CNSANY 909
           L+ G CR                         I G+++  E+  +++LF+L P  N  ++
Sbjct: 202 LVNGYCRAKDMQMATTLFRSMPERNSGSWSTLIKGYVDNGELNRAKQLFELMPEKNVVSW 261

Query: 910 NLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
             ++N  + +  +E        M E G+K
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLK 290


>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
          Length = 608

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/662 (31%), Positives = 356/662 (53%), Gaps = 76/662 (11%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            +++H  +LK  L    S    L+S Y+R+  L  A R FD     +L  +++++++ +  
Sbjct: 21   RRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVS-- 78

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSS 534
                         +SS   P++                  VL LLR M S    RP+   
Sbjct: 79   -------------HSS--DPEL------------------VLPLLRRMLSDDALRPDHFV 105

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            ++ +  A   LR L+ GR+ H +   +    D  V +SL+DMY                 
Sbjct: 106  LASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMY----------------- 148

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                          C  G+  +A+K+ + +  +    + V W +L+SGY+  G + EAL 
Sbjct: 149  --------------CKCGVPQDARKVFDSIGVK----NSVVWTALISGYASNGCTGEALD 190

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK-PNSTTMSSLLQTC 713
            +   M   G++    TWT+LISG ++  NY  ++  F++M+++DI+  ++  +++++   
Sbjct: 191  LFQSMPAHGLF----TWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGA 246

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              L  L  G+++H   ++ GF+    V   L+DMYSK  ++ SAREVF     + + SW 
Sbjct: 247  ADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWT 306

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             +++G A +G  +E   L++ +L  G +P+ +TF  L+ AC ++GLV++G + FDSM  +
Sbjct: 307  TILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKRE 366

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            Y + P ++HY+C +DLL ++GYL EA   I TMP++PD   WGALL +C+ H   +    
Sbjct: 367  YGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLR 426

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
             +  L +L P + + Y L+ N+ A++ +W+ V ++R  M E+ ++ V  +SW++  +   
Sbjct: 427  VADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESR 486

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
            +F A   P     EI   L  LVSEM+K GYVPDT  V  D++E EK + L  H+E+LA+
Sbjct: 487  IFHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAV 546

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +G++K+   + IRV+KN RVC DCHT  K++S +  R+I +RD +RFHHF +G CSC++
Sbjct: 547  AFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNCSCSE 606

Query: 1074 CW 1075
             W
Sbjct: 607  FW 608



 Score =  132 bits (331), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 180/402 (44%), Gaps = 11/402 (2%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            VHA L+K G          L++ Y +   +  A + F + +   D  L++ ++     +
Sbjct: 22  RVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDD-APRRDLHLYSALLAAVSHS 80

Query: 375 EKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
              E  + L R M    A +     +  +  A  ++ +   G+Q+H +   S   ++  V
Sbjct: 81  SDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVV 140

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            + LI MY +    + A +VFDS+   N   W ++IS Y   G    A  LF  M +   
Sbjct: 141 KSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAH-- 198

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV-SVVLQAVTELRLLKYGR 552
              + TW  L+SG    G+Y   + L   M+    R + + V + V+    +L  L  GR
Sbjct: 199 --GLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGR 256

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + HG+++R G    + VG +L+DMY K   + +A+EVF+ +  R++++W +++ G    G
Sbjct: 257 QLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHG 316

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
                  + N+M    +KP+ V++  L+   S  G  ++   +   MK   G+ P V  +
Sbjct: 317 RAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHY 376

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           T  +    ++    E+ K    M  E   P+  T  +LL  C
Sbjct: 377 TCYLDLLSRSGYLSEAEKLITTMPYE---PDEATWGALLSAC 415



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/398 (20%), Positives = 162/398 (40%), Gaps = 49/398 (12%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           +L  +     +L +  LG ++HA      +  D  +K +L++ Y KC   + A K+F  +
Sbjct: 105 VLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSI 164

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ----FSSAKAISR-------------- 397
             +++ ++W  +I     N     A+ LF+ M     F+    IS               
Sbjct: 165 G-VKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLF 223

Query: 398 --------------TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
                          +  ++   A + A   G+Q+HG+V++    S++ V N L+ MYS+
Sbjct: 224 VEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSK 283

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
            + +  A  VF+ +   ++ SW +++      G  +  ++L+N+M  + ++P+ +T+  L
Sbjct: 284 CSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGL 343

Query: 504 LSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           +      G  Q    L   M+   G +P     +  L  ++      Y  E+   I    
Sbjct: 344 IYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSR---SGYLSEAEKLITTMP 400

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDN---MKNRNIVAWNSLISGYCFKGLFVNAKK 619
            + D     +L+    K++  Q    V DN   ++ ++   +  L + Y     + +  K
Sbjct: 401 YEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAK 460

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           +   M E EI+         V GYS W ++     I H
Sbjct: 461 VRKIMAEMEIRK--------VPGYS-WVEAGRESRIFH 489



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 134/307 (43%), Gaps = 37/307 (12%)

Query: 199 NETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRS 257
           +   + R L   +  HA        +++D++VKS LI  Y + G    A K F     ++
Sbjct: 111 SAAGRLRSLRLGRQLHAHF--AASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKN 168

Query: 258 YADWSSFLEDYESFG--GEVQELLE--------VWGEL-----------HGKGVIFRSR- 295
              W++ +  Y S G  GE  +L +         W  L              G+    R 
Sbjct: 169 SVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRR 228

Query: 296 ---------ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
                    +L  ++     L A  LG ++H  +++ GF   + +  AL++ Y KC D+ 
Sbjct: 229 DDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIH 288

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
           SA ++F  ++ + D + W  I++ + ++ + E    L+  M  +  K    T V ++ AC
Sbjct: 289 SAREVFEGIT-VRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYAC 347

Query: 407 AKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSS 464
           +  G   +G+Q+   + +   ++  +    C + + SR+  L  A ++  +M  + + ++
Sbjct: 348 SHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEAT 407

Query: 465 WNSMISS 471
           W +++S+
Sbjct: 408 WGALLSA 414


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 263/919 (28%), Positives = 444/919 (48%), Gaps = 101/919 (10%)

Query: 195  FCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYF 254
            FC  N   +  C+      H+ +IK+G + +   +  +L+  Y +      A   F    
Sbjct: 24   FCNSNSLKEGICI------HSPIIKLG-LQHDLYLTNNLLSLYAKTFGVHRARHLFDEMP 76

Query: 255  SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            +R    W++ L  +        + L+++  + G G       L+  L+ C  L  F  G+
Sbjct: 77   NRDVVSWTTILSSHTKTKHH-SDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGM 135

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCR--DVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            ++H S +K G + +  +  +L+ FY KC    VE A KL S V D  D + W  ++   +
Sbjct: 136  QIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVE-AWKLLSLVKDGGDVVSWTTMLSSLV 194

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
             N KW  A +++ +M  S       T VK+L A +       GK +H +++    E NL 
Sbjct: 195  ENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLV 254

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            +   ++ MYS+        R+ D++K  NL+                             
Sbjct: 255  LKTAVVDMYSK------CRRMVDAIKVSNLTP---------------------------- 280

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
             + D+  W  L+SG   +   +  +++ R M+  G  PN  + S +L A + +  L  G 
Sbjct: 281  -EYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGE 339

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            + H  ++  GL+ DLY+G +L+DMY+K +    NA +VF  + + N++ W SLI+G+  K
Sbjct: 340  QFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEK 399

Query: 612  GLFVNAKKMLNQMEEEEIKP-----------------------------------DLVSW 636
             L  ++ ++  +M+   ++P                                   D+   
Sbjct: 400  RL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVA 458

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
            N+LV  Y+  G   EA  +I  M       + +T+T L +   Q  ++  +LK  I M  
Sbjct: 459  NALVDTYAGVGMIDEAWSVIGTMN----LRDSITYTCLAARLNQKGHHGMALKVLIHMCN 514

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            + IK +  +++S L    GLG ++ GK++HC  +K+GF +   V+  L+ +YSK G++  
Sbjct: 515  DGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHD 574

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            A   F+  +     SWN +I GF+  G    A+  F ++   G +PD+IT  +L++AC +
Sbjct: 575  ANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSH 634

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
             GL+E G +YF SM  +Y+I P ++HY C+VDLLG+ G L+EA   I  M FKPD+ I  
Sbjct: 635  GGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICK 694

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
             LL +C +HG++   E  +RR  +L+P + A Y L+ NL   +   +  E+ R  M E G
Sbjct: 695  TLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERG 754

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            ++      W++I   VH FSA         EI  +L  L++E +      + R  YQ+ +
Sbjct: 755  LRRSPGQCWMEIRSRVHHFSA--GEKINEDEITEKLEFLITEFR------NRRYQYQENE 806

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            ++        H E+LA+ +G++   S +PIR+ KN+ +CS CHT     + V GREI +R
Sbjct: 807  DK------FYHPEQLAVAFGVLNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMR 860

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFH F++G+CSC D +
Sbjct: 861  DRKRFHFFKDGQCSCRDIF 879


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
            mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/570 (36%), Positives = 322/570 (56%), Gaps = 30/570 (5%)

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            VS +L AV     +   RE H  + ++ L  D ++G  L+  Y K    ++A ++FD+M 
Sbjct: 42   VSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMP 101

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------------- 641
            ++++V+WNSLISG+  + L ++         E  +KP+ V+  S++S             
Sbjct: 102  HKDLVSWNSLISGFS-RCLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIH 160

Query: 642  --GYSIWG--QSKEALVIIHHMKNSGIY------------PNVVTWTSLISGSLQNENYR 685
              G  + G  + K A  +I+    SG              PN V+W S+I+  + N   R
Sbjct: 161  GFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAR 220

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            E + +F +M++  I+ +  T+ +LLQ C  LG+ +  + IH L    GF     +AT L+
Sbjct: 221  EGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALL 280

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            D Y+K G L ++  VF +       +W  M+ G+A +G G+EAI LF  +   G +PD +
Sbjct: 281  DTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHV 340

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TFT LL+AC +SGLV EG  YF+ MS  Y I P ++HYSCMVDLLG+ G L++A++ I+ 
Sbjct: 341  TFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQN 400

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP +P+A +WGALLG+CR+HG++E  +  +  L  +EP +  NY ++ N+ + S  W+D 
Sbjct: 401  MPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDA 460

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
             ++R  + E G+K    +S I+     H F      HP T +IY +L  L+ +++K GY 
Sbjct: 461  AKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYS 520

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
              T  V QD++EE K  ++  H+EKLAI +GL+ +K    + + KN R+C DCH+ AK +
Sbjct: 521  SKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLI 580

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            SL+  R I +RD  RFHHF +G CSC D W
Sbjct: 581  SLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 192/452 (42%), Gaps = 54/452 (11%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           E+HA + K     D  +   L+  Y K    E A KLF ++   +D + WN +I    R 
Sbjct: 60  EIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH-KDLVSWNSLISGFSRC 118

Query: 375 EKWENAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                ++  F  M+F  S K    TI+ M+ AC   GA   GK IHG+ +K      + V
Sbjct: 119 --LHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKV 174

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N LI+MY ++  L  A R+F+++ D N  SWNS+I++    G        FNK      
Sbjct: 175 ANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNK------ 228

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
                                        M+ LG   +  ++  +LQA   L + K    
Sbjct: 229 -----------------------------MRRLGIEQDEGTILALLQACLHLGVGKLAES 259

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG +   G    + + T+L+D Y K   L  +  VF  +   + VAW ++++GY   GL
Sbjct: 260 IHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGL 319

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A K+   M  + ++PD V++  L+S  S  G   E     + M    GI P V  ++
Sbjct: 320 GREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYS 379

Query: 673 SLIS----GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            ++       L N+ Y         +Q   ++PN+    +LL  C   G ++ GKE+   
Sbjct: 380 CMVDLLGRCGLLNDAYE-------VIQNMPMEPNAGVWGALLGACRVHGNIELGKEV-AE 431

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
            L N    D      L +MYS S + K A +V
Sbjct: 432 HLINMEPLDPRNYIMLSNMYSASRSWKDAAKV 463



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 7/218 (3%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +H   IK G   +V +  +L+N YGK  D+ SA +LF  + D  + + WN II  ++
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPD-PNTVSWNSIIAAQV 214

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N      I  F +M+    +    TI+ +LQAC  +G     + IHG +  +   + ++
Sbjct: 215 TNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKIT 274

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           +   L+  Y++  +L  +  VF  +   +  +W +M++ Y   G    A  LF  M +  
Sbjct: 275 IATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKG 334

Query: 493 IQPDIITWNCLLSGHFTHG------SYQNVLTLLRGMQ 524
           ++PD +T+  LLS     G      SY NV++ + G++
Sbjct: 335 LEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIE 372



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 112/267 (41%), Gaps = 5/267 (1%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L + K  H   IK+G       +  SLI  Y + GD TSA + F      +   W+S + 
Sbjct: 153 LDAGKYIHGFGIKVGGTLEVK-VANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
             +   G  +E ++ + ++   G+      +  +L+ C  L    L   +H  +   GF 
Sbjct: 212 A-QVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFG 270

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
             + +  AL++ Y K   + ++  +F+EV    D + W  ++     +     AIKLF  
Sbjct: 271 AKITIATALLDTYAKLGRLSASYGVFTEVG-FADRVAWTAMLAGYAAHGLGREAIKLFES 329

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNN 445
           M     +    T   +L AC+  G  +EGK     + +   +E  +   +C++ +  R  
Sbjct: 330 MANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCG 389

Query: 446 KLELATRVFDSMK-DHNLSSWNSMISS 471
            L  A  V  +M  + N   W +++ +
Sbjct: 390 LLNDAYEVIQNMPMEPNAGVWGALLGA 416


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
            mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/570 (36%), Positives = 322/570 (56%), Gaps = 30/570 (5%)

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            VS +L AV     +   RE H  + ++ L  D ++G  L+  Y K    ++A ++FD+M 
Sbjct: 42   VSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMP 101

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------------- 641
            ++++V+WNSLISG+  + L ++         E  +KP+ V+  S++S             
Sbjct: 102  HKDLVSWNSLISGFS-RCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIH 160

Query: 642  --GYSIWG--QSKEALVIIHHMKNSGIY------------PNVVTWTSLISGSLQNENYR 685
              G  + G  + K A  +I+    SG              PN V+W S+I+  + N   R
Sbjct: 161  GFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAR 220

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            E + +F +M++  I+ +  T+ +LLQ C  LG+ +  + IH L    GF     +AT L+
Sbjct: 221  EGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALL 280

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            D Y+K G L ++  VF +       +W  M+ G+A +G G+EAI LF  +   G +PD +
Sbjct: 281  DTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHV 340

Query: 806  TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
            TFT LL+AC +SGLV EG  YF+ MS  Y I P ++HYSCMVDLLG+ G L++A++ I+ 
Sbjct: 341  TFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQN 400

Query: 866  MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDV 925
            MP +P+A +WGALLG+CR+HG++E  +  +  L  +EP +  NY ++ N+ + S  W+D 
Sbjct: 401  MPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDA 460

Query: 926  ERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYV 985
             ++R  + E G+K    +S I+     H F      HP T +IY +L  L+ +++K GY 
Sbjct: 461  AKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYS 520

Query: 986  PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
              T  V QD++EE K  ++  H+EKLAI +GL+ +K    + + KN R+C DCH+ AK +
Sbjct: 521  SKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLI 580

Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            SL+  R I +RD  RFHHF +G CSC D W
Sbjct: 581  SLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 193/452 (42%), Gaps = 54/452 (11%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           E+HA + K     D  +   L+  Y K    E A KLF ++   +D + WN +I    R 
Sbjct: 60  EIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH-KDLVSWNSLISGFSRC 118

Query: 375 EKWENAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
                ++  F  M+F  S K    TI+ M+ AC+  GA   GK IHG+ +K      + V
Sbjct: 119 --LHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKV 174

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N LI+MY ++  L  A R+F+++ D N  SWNS+I++    G        FNK      
Sbjct: 175 ANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNK------ 228

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
                                        M+ LG   +  ++  +LQA   L + K    
Sbjct: 229 -----------------------------MRRLGIEQDEGTILALLQACLHLGVGKLAES 259

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG +   G    + + T+L+D Y K   L  +  VF  +   + VAW ++++GY   GL
Sbjct: 260 IHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGL 319

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A K+   M  + ++PD V++  L+S  S  G   E     + M    GI P V  ++
Sbjct: 320 GREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYS 379

Query: 673 SLIS----GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            ++       L N+ Y         +Q   ++PN+    +LL  C   G ++ GKE+   
Sbjct: 380 CMVDLLGRCGLLNDAYE-------VIQNMPMEPNAGVWGALLGACRVHGNIELGKEV-AE 431

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
            L N    D      L +MYS S + K A +V
Sbjct: 432 HLINMEPLDPRNYIMLSNMYSASRSWKDAAKV 463



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 165/382 (43%), Gaps = 43/382 (11%)

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           S +N  E+  RVF S+   +    + +++ Y  LGY + A  LF+ M       D+++WN
Sbjct: 54  SISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMP----HKDLVSWN 109

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
            L+SG F+   + ++         +  +PN  ++  ++ A +    L  G+  HG+ ++ 
Sbjct: 110 SLISG-FSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGA--LDAGKYIHGFGIKV 166

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
           G   ++ V  SL++MY K+  L +A  +F+ + + N V+WNS+I+     G         
Sbjct: 167 GGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYF 226

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI----------------- 664
           N+M    I+ D  +  +L+      G  K A  I   M  +G                  
Sbjct: 227 NKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKL 286

Query: 665 --------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
                         + + V WT++++G   +   RE++K F  M  + ++P+  T + LL
Sbjct: 287 GRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLL 346

Query: 711 QTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
             C   GL+  GK   + +    G        + ++D+  + G L  A EV +    +  
Sbjct: 347 SACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPN 406

Query: 770 AS-WNCMIMGFAIYGN---GKE 787
           A  W  ++    ++GN   GKE
Sbjct: 407 AGVWGALLGACRVHGNIELGKE 428



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 7/218 (3%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +H   IK G   +V +  +L+N YGK  D+ SA +LF  + D  + + WN II  ++
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPD-PNTVSWNSIIAAQV 214

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N      I  F +M+    +    TI+ +LQAC  +G     + IHG +  +   + ++
Sbjct: 215 TNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKIT 274

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           +   L+  Y++  +L  +  VF  +   +  +W +M++ Y   G    A  LF  M +  
Sbjct: 275 IATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKG 334

Query: 493 IQPDIITWNCLLSGHFTHG------SYQNVLTLLRGMQ 524
           ++PD +T+  LLS     G      SY NV++ + G++
Sbjct: 335 LEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIE 372



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 112/267 (41%), Gaps = 5/267 (1%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L + K  H   IK+G       +  SLI  Y + GD TSA + F      +   W+S + 
Sbjct: 153 LDAGKYIHGFGIKVGGTLEVK-VANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
             +   G  +E ++ + ++   G+      +  +L+ C  L    L   +H  +   GF 
Sbjct: 212 A-QVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFG 270

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
             + +  AL++ Y K   + ++  +F+EV    D + W  ++     +     AIKLF  
Sbjct: 271 AKITIATALLDTYAKLGRLSASYGVFTEVG-FADRVAWTAMLAGYAAHGLGREAIKLFES 329

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNN 445
           M     +    T   +L AC+  G  +EGK     + +   +E  +   +C++ +  R  
Sbjct: 330 MANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCG 389

Query: 446 KLELATRVFDSMK-DHNLSSWNSMISS 471
            L  A  V  +M  + N   W +++ +
Sbjct: 390 LLNDAYEVIQNMPMEPNAGVWGALLGA 416


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 624

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/575 (34%), Positives = 317/575 (55%), Gaps = 40/575 (6%)

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            + +L+  T  +LL  GR  HG+++++   +DL +  +L++MY K   L+ A++VFD M  
Sbjct: 55   NTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPE 114

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG------------- 642
            R+ V W +LISGY       +A  + NQM      P+  + +S++               
Sbjct: 115  RDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQL 174

Query: 643  ----------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                                  Y+ +G   +A ++   +++     N V+W +LI+G  +
Sbjct: 175  HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHAR 230

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
                 ++L+ F  M +E  +P+  + +SL   C   G L+ GK +H   +K+G    A+ 
Sbjct: 231  RCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 290

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
               L+DMY+KSG++  AR++F + A + + SWN ++  +A +G G EA+  F E+   G 
Sbjct: 291  GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGI 350

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ I+F ++L AC +SGL++EGW Y++ M  D  I+    HY  +VDLLG+AG L+ A 
Sbjct: 351  RPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRAL 409

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
             FI  MP +P A IW ALL +CR+H + E    A+  +F+L+P +   + ++ N+ A   
Sbjct: 410  RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 469

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RW D  R+R  M E GVK     SW++I+  +H+F A    HP   EI  +   +++++K
Sbjct: 470  RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 529

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            +LGYVPDT  V   +D++E+   L  H+EK+A+ + L+ T   + I + KN RVC DCH+
Sbjct: 530  ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHS 589

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            A K  S   GREI +RD  RFHHF++G CSC D W
Sbjct: 590  AIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 197/430 (45%), Gaps = 39/430 (9%)

Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
           +L G  +    R    +LK CT       G  VH  LI+  F  D+ +   L+N Y KC 
Sbjct: 41  DLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCG 100

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            +E A K+F ++ +  D + W  +I    ++++  +A+ LF +M          T+  ++
Sbjct: 101 SLEEARKVFDKMPE-RDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVI 159

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +A A       G Q+HG+ +K   +SN+ V + L+ +Y+R   ++ A  VFD+++  N  
Sbjct: 160 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 219

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           SWN++I                                   +GH      +  L L +GM
Sbjct: 220 SWNALI-----------------------------------AGHARRCGTEKALELFQGM 244

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
              GFRP+  S + +  A +    L+ G+  H Y++++G     + G +L+DMY K+  +
Sbjct: 245 LREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 304

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            +A+++FD +  R++V+WNSL++ Y   G    A     +M    I+P+ +S+ S+++  
Sbjct: 305 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTAC 364

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
           S  G   E       MK  GI      + +++    +  +   +L+F  +M    I+P +
Sbjct: 365 SHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMP---IEPTA 421

Query: 704 TTMSSLLQTC 713
               +LL  C
Sbjct: 422 AIWKALLNAC 431



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 192/415 (46%), Gaps = 67/415 (16%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L+ C       +G+ +HG++++S    +L + N L++MY++                  
Sbjct: 57  LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAK------------------ 98

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                         G ++ A  +F+KM     + D +TW  L+SG+  H    + L L  
Sbjct: 99  -------------CGSLEEARKVFDKMP----ERDFVTWTTLISGYSQHDRPFDALVLFN 141

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M   GF PN  ++S V++A    R    G + HG+ ++ G D +++VG++L+D+Y +  
Sbjct: 142 QMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 201

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            + +AQ VFD +++RN V+WN+LI+G+  +     A ++   M  E  +P   S+ SL  
Sbjct: 202 LMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFG 261

Query: 642 GYSIWG-------------QSKEALVIIH-------HMKNSGIYP-----------NVVT 670
             S  G             +S E LV          + K+  I+            +VV+
Sbjct: 262 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 321

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           W SL++   Q+    E++ +F +M++  I+PN  +  S+L  C   GLL  G   + L  
Sbjct: 322 WNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 381

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWNCMIMGFAIYGN 784
           K+G + +A+    ++D+  ++G+L  A R +       T A W  ++    ++ N
Sbjct: 382 KDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 436



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 143/287 (49%), Gaps = 8/287 (2%)

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           +N+L+       L    + +   + +   + DLV  N+L++ Y+  G  +EA  +   M 
Sbjct: 54  YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                 + VTWT+LISG  Q++   ++L  F QM +    PN  T+SS+++         
Sbjct: 114 ER----DFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
            G ++H  C+K GF  + +V + L+D+Y++ G +  A+ VF    ++   SWN +I G A
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-WKYFDSMSTDYNIIPT 839
                ++A+ LF  +L  GF+P   ++ +L  AC ++G +E+G W +   + +   ++  
Sbjct: 230 RRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 289

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
               + ++D+  K+G + +A      +  K D   W +LL +   HG
Sbjct: 290 AG--NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHG 333



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 102/473 (21%), Positives = 200/473 (42%), Gaps = 48/473 (10%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
            L +   F+ L+  +  H  +I+   I+  D  M  +L+  Y + G    A K F     
Sbjct: 57  LLKKCTVFKLLTQGRIVHGHLIQ--SIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPE 114

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R +  W++ +  Y         L+ ++ ++   G       L+ ++K          G +
Sbjct: 115 RDFVTWTTLISGYSQHDRPFDALV-LFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H   +K GFD +VH+  AL++ Y +   ++ A  +F  +    +D+ WN +I    R  
Sbjct: 174 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES-RNDVSWNALIAGHARRC 232

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             E A++LF+ M     +    +   +  AC+  G   +GK +H Y++KS  +      N
Sbjct: 233 GTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 292

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L+ MY+++  +  A ++FD +   ++ SWNS++++Y   G+ + A   F +M       
Sbjct: 293 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMR------ 346

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                                    RG    G RPN  S   VL A +   LL  G   +
Sbjct: 347 -------------------------RG----GIRPNEISFLSVLTACSHSGLLDEGWHYY 377

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA-WNSLISG---YCFK 611
             + ++G+  + +   +++D+  +   L  A    + M      A W +L++    +   
Sbjct: 378 ELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNT 437

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
            L   A + + +++ ++  P ++ +N   SG    G+  +A  +   MK SG+
Sbjct: 438 ELGAYAAEHVFELDPDDPGPHVILYNIYASG----GRWNDAARVRKKMKESGV 486


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/587 (35%), Positives = 336/587 (57%), Gaps = 44/587 (7%)

Query: 528  FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
              P+ +  + +L+  T L  LK G+  H +++ +    DL +  S++ MY K   L+ A+
Sbjct: 87   LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN---QMEEEEIKPDLVS--------- 635
            +VFD M  +++V W S+I+GY   G   +A   L    +M  + ++P+  +         
Sbjct: 147  QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206

Query: 636  ---------------W-----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                           W           +SLV  Y+  G+ +E+ ++   +++     N V
Sbjct: 207  FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK----NEV 262

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +W +LISG  +     E+L  F++MQ+E       T S+LL +    G L+ GK +H   
Sbjct: 263  SWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHM 322

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            +K+G     YV   L+ MY+KSGN+  A++VF +     + S N M++G+A +G GKEA+
Sbjct: 323  MKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAV 382

Query: 790  LLFHEL-LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
             LF E+ L    +P+ ITF ++L AC ++GL++EG  YF+ M   Y + P + HY+ +VD
Sbjct: 383  ELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMK-KYGLEPKLSHYTTVVD 441

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            L G+AG LD+A  FI  MP +P+ATIWGALLG+ ++H + E    A++++ +L+P     
Sbjct: 442  LFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGA 501

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            + L+ N+ A + +W+DV ++R  M + G+K     SW++I+  VH+FSA    HP   ++
Sbjct: 502  HTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKV 561

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y    +L  ++K++GYVPDT  V+  +D++EK   L  H+EKLA+ + L+ TK  + IR+
Sbjct: 562  YEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRI 621

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +KN RVC DCH+A KY+SLV  REI +RD  RFHHFR+G CSC D W
Sbjct: 622  MKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 217/481 (45%), Gaps = 50/481 (10%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           I   +LK CT L     G  VH  L+   F  D+ +K +++  Y KC  +E A ++F E+
Sbjct: 93  IYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEM 152

Query: 356 SDLEDDLLWNEIIMVKLRN---EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             ++D + W  +I    ++        A+ LF EM     +     +  +++ C  +G+ 
Sbjct: 153 C-VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSC 211

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            +GKQIHG   K   + N+ V + L+ MY+R  +L  +  VFD ++  N  SWN++IS +
Sbjct: 212 VDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGF 271

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
              G  + A  LF KM          T++ LL    T GS                    
Sbjct: 272 ARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGS-------------------- 311

Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
                          L+ G+  H +++++G     YVG +L+ MY K+  + +A++VFD 
Sbjct: 312 ---------------LEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDR 356

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQSKE 651
           +   ++V+ NS++ GY   GL   A ++  +M    EI+P+ +++ S+++  S  G   E
Sbjct: 357 LVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDE 416

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
            L     MK  G+ P +  +T+++          +  K FI  ++  I+PN+T   +LL 
Sbjct: 417 GLYYFELMKKYGLEPKLSHYTTVVD-LFGRAGLLDQAKSFI--EEMPIEPNATIWGALL- 472

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVA---TGLIDMYSKSGNLKSAREVFRKSANKT 768
              G   +    E+     +     D +     T L ++Y+ +G  K   +V ++  +  
Sbjct: 473 ---GASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSG 529

Query: 769 L 769
           L
Sbjct: 530 L 530



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 198/446 (44%), Gaps = 67/446 (15%)

Query: 397 RTIV-KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
           RTI  K+L+ C  +G   +GK +H +++ S   ++L + N ++ MY++   LE+A +VFD
Sbjct: 91  RTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFD 150

Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
            M   ++ +W SMI+ Y+  GY   A                                  
Sbjct: 151 EMCVKDVVTWTSMITGYSQDGYASSA--------------------------------TT 178

Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            L L   M   G RPN  ++S +++    L     G++ HG   + G   +++VG+SL+D
Sbjct: 179 ALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVD 238

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           MY +   L+ ++ VFD ++++N V+WN+LISG+  KG    A  +  +M+ E       +
Sbjct: 239 MYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFT 298

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSG-------------------------------I 664
           +++L+   S  G  ++   +  HM  SG                               +
Sbjct: 299 YSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLV 358

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             +VV+  S++ G  Q+   +E+++ F +M    +I+PN  T  S+L  C   GLL  G 
Sbjct: 359 KVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGL 418

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIY 782
               L  K G        T ++D++ ++G L  A+    +   +  A+ W  ++    ++
Sbjct: 419 YYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478

Query: 783 GNGKEAILLFHELLETG-FQPDAITF 807
            N +       ++LE   F P A T 
Sbjct: 479 KNTEMGAYAAQKVLELDPFYPGAHTL 504



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 161/355 (45%), Gaps = 8/355 (2%)

Query: 205 RCLSSVKSKHAQMIK---MGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYAD 260
           RC    K K  +++    M   + +D ++K S++F Y + G    A + F     +    
Sbjct: 100 RCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVT 159

Query: 261 WSSFLEDY--ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
           W+S +  Y  + +       L ++ E+   G+      L+ ++K C  L +   G ++H 
Sbjct: 160 WTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHG 219

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
              K GF  +V +  +L++ Y +C ++  +  +F E+   ++++ WN +I    R  + E
Sbjct: 220 CCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELES-KNEVSWNALISGFARKGEGE 278

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            A+ LF +MQ     A   T   +L + +  G+  +GK +H +++KS  +    V N L+
Sbjct: 279 EALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLL 338

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS-SRIQPDI 497
            MY+++  +  A +VFD +   ++ S NSM+  Y   G    A  LF +M     I+P+ 
Sbjct: 339 HMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPND 398

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           IT+  +L+     G     L     M+  G  P  S  + V+       LL   +
Sbjct: 399 ITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAK 453


>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 702

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/670 (31%), Positives = 355/670 (52%), Gaps = 58/670 (8%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG +VHA  +K GF     ++  L+  YG+   ++ AN +F ++    +   W  I+ V 
Sbjct: 77  LGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQ-RNLYSWTAILSVH 135

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           + +  +E A+ LF ++Q             +L+ C  +     G+Q+HG V+K       
Sbjct: 136 VDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIK------- 188

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
                      R   +  A ++F      N+ S+N+MI  Y   G V+ A  LF++M   
Sbjct: 189 -----------RCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQM--E 235

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKY 550
            +  D I+WN ++SG+  +  +   L++ R +    G   +  ++  VL A  ++  L+ 
Sbjct: 236 LVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRR 295

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           G+E H   +  GL ++ +VG +L++MY K + L+ AQ  FD +  R              
Sbjct: 296 GKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTER-------------- 341

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                                D  +WN L+SGY+   Q +    +I  MK  G  PNV T
Sbjct: 342 ---------------------DTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYT 380

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           W  +ISG ++N +   +L+ F +MQ   ++P+  T+  +L  C  L  +  GK++H   +
Sbjct: 381 WNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSI 440

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
           + G+  D ++   L+DMY+K G++K A +V+ + +N  L S N M+  +A++G+G E I 
Sbjct: 441 RQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIA 500

Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
           LF  +L  GF+PD +TF ++L++C ++G VE G ++FD M T YN+ P+++HY+C+VDLL
Sbjct: 501 LFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLL 559

Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            +AG LDEA++ ++ +P KPD+ +WGALLG C I G++E  EIA+  L +LEP N+ NY 
Sbjct: 560 SRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYV 619

Query: 911 LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
           L+ NL A + RW D++R R  + + G+      SWI+  + +HVF +    H  T +IY 
Sbjct: 620 LLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYT 679

Query: 971 ELYHLVSEMK 980
            L +L + M+
Sbjct: 680 TLDNLNTHMR 689



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 275/589 (46%), Gaps = 38/589 (6%)

Query: 147 HHFNT-RTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCI-----SSGFCFLNE 200
           H FN  R   N +  S  PNS   +P S+ L    T A    LS +     SS +  L E
Sbjct: 19  HDFNVPRKPTNLSFQS--PNS---TPQSMHLS---TAAHHTHLSLLDKQIDSSTYASLLE 70

Query: 201 TNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYA 259
           +   R L+  K  HA  +K G  ++  + V++ L+  Y  FG    A   F     R+  
Sbjct: 71  S--CRTLNLGKQVHAHTLKTG--FHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLY 126

Query: 260 DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHAS 319
            W++ L  +   G   +E L ++ +L    +     +  ++LKLC  L    LG ++H  
Sbjct: 127 SWTAILSVHVDHG-YFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGV 185

Query: 320 LIKRGFDFDVHLKC-------------ALMNFYGKCRDVESANKLFSEVSDL-EDDLLWN 365
           +IKR  D    LK               ++  Y +  +VE A +LF ++  + +D + WN
Sbjct: 186 VIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWN 245

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSA-KAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
            +I     N  ++ A+ +FR++      +A S T+  +L ACA + +   GK++H   + 
Sbjct: 246 SMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVV 305

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
             L  N  V   L+ MYS+   L+ A   FD + + + ++WN +IS Y     ++   +L
Sbjct: 306 RGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNL 365

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
             KM     +P++ TWN ++SGH  +G  +  L L   MQ+   RP+  +V ++L A   
Sbjct: 366 IQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACAR 425

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
           L  +  G++ H + +R G + D+++G +L+DMY K   +++A +V++ + N N+V+ N++
Sbjct: 426 LATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAM 485

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           ++ Y   G       +   M     +PD V++ S++S     G  +        M    +
Sbjct: 486 LTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNV 545

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            P++  +T ++    +     E+ +   ++ +   KP+S    +LL  C
Sbjct: 546 TPSLKHYTCIVDLLSRAGRLDEAYELVKKIPR---KPDSVMWGALLGGC 591



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 3/126 (2%)

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
           D + +S+T +SLL++C  L L   GK++H   LK GF    +V T L+ MY + G L  A
Sbjct: 57  DKQIDSSTYASLLESCRTLNL---GKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDA 113

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             VF K   + L SW  ++     +G  +EA+ LF +L       +   F  +L  C   
Sbjct: 114 NLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGL 173

Query: 818 GLVEEG 823
            ++E G
Sbjct: 174 RVLELG 179


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 624

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/559 (35%), Positives = 306/559 (54%), Gaps = 39/559 (6%)

Query: 552  RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            R+ H  I  NG   +L V   L+ MYV+   L++AQE+FD M  R+  +W+ ++ GY   
Sbjct: 70   RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVS-----------------------------------W 636
            G F +   M  ++       D  S                                    
Sbjct: 130  GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             +LV  Y+     ++A  I   M       ++ TWT +I    ++    ESL FF +M+ 
Sbjct: 190  ATLVDMYARCKVVEDAHQIFVKMWKR----DLATWTVMIGALAESGVPVESLVFFDRMRN 245

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            + I P+   + +++  C  LG +   K IH      G+  D  + T +IDMY+K G+++S
Sbjct: 246  QGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVES 305

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            AR +F +   + + +W+ MI  +  +G G++A+ LF  +L +G  P+ ITF +LL AC +
Sbjct: 306  ARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSH 365

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            +GL+EEG ++F SM  +Y + P ++HY+CMVDLLG+AG LDEA + I  MP + D  +WG
Sbjct: 366  AGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWG 425

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            ALLG+CRIH HL+ AE  +R L KL+     +Y L+ N+ A + +WED+ + R  M + G
Sbjct: 426  ALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGG 485

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            ++ +   +WI++ + ++ F      HP + EIY  L  L  +++  GY PDT  V  D+D
Sbjct: 486  LRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVD 545

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            EE K  +L SH+EKLAI +GL+      PIR+ KN RVC DCHT  K++SL+  + I +R
Sbjct: 546  EEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVR 605

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFHHF+EG CSC D W
Sbjct: 606  DAKRFHHFKEGVCSCRDYW 624



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 36/333 (10%)

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           NL+  N ++  Y   G ++ A  LF+ M  S+  P   +W+ ++ G+   G++ +   + 
Sbjct: 84  NLAVANKLLYMYVERGALEDAQELFDGM--SKRHP--YSWSVIVGGYAKVGNFFSCFWMF 139

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
           R +   G   +  S  VV++A  +L+ LK GR  H   L+ GLDY  +V  +L+DMY + 
Sbjct: 140 RELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARC 199

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             +++A ++F  M  R++  W  +I      G+ V +    ++M  + I PD V+  ++V
Sbjct: 200 KVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVV 259

Query: 641 SGYSIWGQSKEALVIIHHMKNSG-------------IYP------------------NVV 669
              +  G   +A  I  ++  +G             +Y                   NV+
Sbjct: 260 YACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVI 319

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCL 728
           TW+++I+    +    ++L+ F  M +  I PN  T  SLL  C   GL++ G+     +
Sbjct: 320 TWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSM 379

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
             + G   D    T ++D+  ++G L  A E+ 
Sbjct: 380 WDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMI 412



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 5/301 (1%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           R L  V+  HAQ+   G   N   +   L++ Y+E G    A + F     R    WS  
Sbjct: 64  RNLFQVRQVHAQIATNGAFRNLA-VANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVI 122

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +  Y   G        ++ EL   G         ++++ C  L     G  +H   +K G
Sbjct: 123 VGGYAKVG-NFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCG 181

Query: 325 FDFDVHLKCA-LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
            D+  H  CA L++ Y +C+ VE A+++F ++    D   W  +I     +     ++  
Sbjct: 182 LDYG-HFVCATLVDMYARCKVVEDAHQIFVKMWK-RDLATWTVMIGALAESGVPVESLVF 239

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F  M+          +V ++ ACAK+GA ++ K IH Y+  +    ++ +   +I MY++
Sbjct: 240 FDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAK 299

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              +E A  +FD M+  N+ +W++MI++Y   G  + A  LF  M  S I P+ IT+  L
Sbjct: 300 CGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSL 359

Query: 504 L 504
           L
Sbjct: 360 L 360



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 112/254 (44%), Gaps = 8/254 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y        A + F   + R  A W+  +      G  V+ L+  +  +  +G++
Sbjct: 191 TLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLV-FFDRMRNQGIV 249

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                L  ++  C KL A      +HA +   G+  DV L  A+++ Y KC  VESA  +
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWI 309

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +  + + + W+ +I     + + E A++LF  M  S       T V +L AC+  G 
Sbjct: 310 FDRMQ-VRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGL 368

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSM---KDHNLSSWNS 467
             EG++    +     +  ++    C++ +  R  +L+ A  + + M   KD  L  W +
Sbjct: 369 IEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVL--WGA 426

Query: 468 MISSYTGLGYVDVA 481
           ++ +     ++D+A
Sbjct: 427 LLGACRIHRHLDLA 440


>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
            [Vitis vinifera]
          Length = 663

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/623 (35%), Positives = 334/623 (53%), Gaps = 51/623 (8%)

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             N S    +I SY G   +  A  +F++  S    P  I WN ++  +    S Q  L L
Sbjct: 85   QNTSLLGPLIHSYIGCRNLSFARIVFDQFPS---LPPTIIWNLMIQAYSKTPSSQESLYL 141

Query: 520  LRGMQSLGFRPNGS---SVSVVLQAVTELRLLK-YGRESHGYILRNGLDYDLYVGTSLMD 575
               M + G RP  +   + + V  A +    L+ YG   HG ++++G + D++VG SL++
Sbjct: 142  FHQMLAHG-RPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVN 200

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
            MY           +F  M                     V+AK++ ++M +     D+++
Sbjct: 201  MY----------SIFSRM---------------------VDAKRVFDEMPQR----DVIT 225

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            W S+V GY++ G+   A  +   M       N V+W  +++G + +  Y E+L+ F  M 
Sbjct: 226  WTSVVKGYAMRGELVRARELFDMMPGR----NDVSWAVMVAGYVGHRFYNEALQCFNDML 281

Query: 696  -QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
              +++KPN   + S+L  C  LG L  GK IH    KN  +  + ++T LIDMY+K G +
Sbjct: 282  CHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRI 341

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
              AR VF     + L +W  MI G +++G G E +  F E+L  GF+PD IT   +L  C
Sbjct: 342  DCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGC 401

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
             +SGLVEEG   F  M   + I+P +EHY C++DLLG+AG L+ A++ I++MP +PD   
Sbjct: 402  SHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVA 461

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEP-CNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            W ALL +CRIHG ++  E     + +L P  +   Y L+ NL A   +WE V ++R +M 
Sbjct: 462  WRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMS 521

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK-KLGYVPDTRCVY 992
            + G +     SWI+ID +VH F A    HP   EI  +L  ++  +  + GYVP T+ V 
Sbjct: 522  QRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVL 581

Query: 993  QDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGRE 1052
             D++EE+K + +  H+EKLA+ +GL+ T+    IR+ KN R C DCH+A K +SLV  RE
Sbjct: 582  FDLNEEDKEQAVSWHSEKLAVAFGLLSTQ-EGTIRITKNLRTCEDCHSAMKTISLVFNRE 640

Query: 1053 IFLRDGARFHHFREGECSCNDCW 1075
            I +RD +RFH FR G CSC D W
Sbjct: 641  IVVRDRSRFHTFRYGNCSCTDYW 663



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 213/465 (45%), Gaps = 26/465 (5%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++HA ++  G   +  L   L++ Y  CR++  A  +F +   L   ++WN +I    + 
Sbjct: 73  QIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKT 132

Query: 375 EKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHE-GKQIHGYVLKSALESNL 431
              + ++ LF +M        A   T   +  AC++       G+ +HG V+K   ES++
Sbjct: 133 PSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDI 192

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N L++MYS  +++  A RVFD M   ++ +W S++  Y   G +  A  LF+ M   
Sbjct: 193 FVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGR 252

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKY 550
               + ++W  +++G+  H  Y   L     M      +PN + +  +L A   L  L  
Sbjct: 253 ----NDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQ 308

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           G+  H YI +N +     + T+L+DMY K   +  A+ VFD +  R+++ W S+ISG   
Sbjct: 309 GKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSM 368

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVV 669
            GL        ++M  E  KPD ++   +++G S  G  +E L I H M    GI P + 
Sbjct: 369 HGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLE 428

Query: 670 TWTSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
            +  LI     +G L++         F  ++   ++P+     +LL  C   G +  G+ 
Sbjct: 429 HYGCLIDLLGRAGRLESA--------FEAIKSMPMEPDVVAWRALLSACRIHGDVDLGER 480

Query: 725 I--HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           I  H   L  G     YV   L ++Y+  G  +S  +V +  + +
Sbjct: 481 IINHIAELCPGSHGGGYVL--LSNLYASMGQWESVTKVRKAMSQR 523



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 199/470 (42%), Gaps = 80/470 (17%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS- 255
           F+    K   L+ +K  HAQ++  G   N+  ++  LI  Y+   + + A   F  + S 
Sbjct: 58  FVQLLKKRPSLTQIKQIHAQVVTHGLAQNTS-LLGPLIHSYIGCRNLSFARIVFDQFPSL 116

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGEL--HGKGVIFRSRILTIILKLCTKLMAF-WL 312
                W+  ++ Y S     QE L ++ ++  HG+         T +   C++       
Sbjct: 117 PPTIIWNLMIQAY-SKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGY 175

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII---- 368
           G  VH  ++K G++ D+ +  +L+N Y     +  A ++F E+    D + W  ++    
Sbjct: 176 GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQ-RDVITWTSVVKGYA 234

Query: 369 -------------MVKLRNEK--------------WENAIKLFREMQ-FSSAKAISRTIV 400
                        M+  RN+               +  A++ F +M      K     +V
Sbjct: 235 MRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLV 294

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
            +L ACA +GA  +GK IH Y+ K+ +  + ++   LI MY++  +++ A RVFD +   
Sbjct: 295 SILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKR 354

Query: 461 NLSSWNSMIS--SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
           +L +W SMIS  S  GLG  +  W+ F++M +   +PD IT   +L+G    G  +  L+
Sbjct: 355 DLLTWTSMISGLSMHGLG-AECLWT-FSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLS 412

Query: 519 LLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
           +   M  L G  P               +L  YG                     L+D+ 
Sbjct: 413 IFHDMIPLWGIVP---------------KLEHYG--------------------CLIDLL 437

Query: 578 VKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            +   L++A E   +M    ++VAW +L+S     G     ++++N + E
Sbjct: 438 GRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAE 487


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13880-like
            [Brachypodium distachyon]
          Length = 796

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/804 (28%), Positives = 403/804 (50%), Gaps = 83/804 (10%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCR----DVESANKLFSEVSDLEDDLLWNEIIMVK 371
            VH  + +      + L+  L+  Y  CR    D   A +L  E+    + + +N +I   
Sbjct: 32   VHGHIARAHPSPSLFLRNTLLAAY--CRLGAGDTHQARRLLDEMPR-RNAVSFNLLIDAY 88

Query: 372  LRNEKWENAIKLF-REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             R  + E +++ F    + +  KA   T    L AC++ G   EGK +H   +   L   
Sbjct: 89   SRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEG 148

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
            + V N L+SMY+R   +  A RVFD  ++                               
Sbjct: 149  VFVSNSLVSMYARCGDMGEARRVFDVTEER------------------------------ 178

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT--ELRLL 548
                 D ++WN L+SG+   G+++ +L +   M+      N  ++  V++  +  +  + 
Sbjct: 179  -----DDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVR 233

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
                  HG +++ GLD DL++ ++++DMY K   L  A  +F ++ + N+V +N++I+G 
Sbjct: 234  GIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGL 293

Query: 609  C------FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIH 657
            C       K +   A  + ++++   ++P   +++S++   ++     +G+     V+ H
Sbjct: 294  CRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKH 353

Query: 658  HMKNSG--------IYPN------------------VVTWTSLISGSLQNENYRESLKFF 691
              +           +Y N                  VVTWT++ISG +QNE +  +L  F
Sbjct: 354  CFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALF 413

Query: 692  IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
             ++    +KP+  T+SS++  C  L +++ G+++ C   K+GF +   +    I MY++S
Sbjct: 414  HELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARS 473

Query: 752  GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            GN+++A + F++  +  + SW+ +I   A +G  ++A+  F+E++     P+ ITF  +L
Sbjct: 474  GNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVL 533

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
             AC + GLV+EG +Y++ M  +Y + PT++H +C+VDLLG+AG L +A  FIR   F  +
Sbjct: 534  TACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDE 593

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
              +W +LLGSCRIH  +E  ++ + R+ +L+P +S  Y  + N+   +       ++R  
Sbjct: 594  PVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDL 653

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M E GVK     SWI++   +H F A    HP    IY +L  ++S++ KL    DT C+
Sbjct: 654  MKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDKL-TTTDTSCI 712

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
                    +   +  H+EKLA+  G++     APIRV+KN RVC DCH+  K +S    R
Sbjct: 713  EWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECR 772

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI LRD  RFHHFR+G CSC D W
Sbjct: 773  EIILRDVIRFHHFRDGSCSCGDYW 796



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/601 (21%), Positives = 263/601 (43%), Gaps = 69/601 (11%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           L  GD T  A+       R  A   + L D  S  G+ +E LE +   H    +   R  
Sbjct: 58  LGAGD-THQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFT 116

Query: 298 -TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
               L  C++      G  VHA  +  G    V +  +L++ Y +C D+  A ++F +V+
Sbjct: 117 YAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVF-DVT 175

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG- 415
           +  DD+ WN ++   LR    E  +++F  M+  +    S  +  +++ C+       G 
Sbjct: 176 EERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGI 235

Query: 416 -KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            + +HG V+K+ L+++L + + ++ MY++   L  A  +F S+ D N+  +N+MI+    
Sbjct: 236 AEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLC- 294

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                         + + +  +++               +  L+L   +QS G  P   +
Sbjct: 295 -------------RDEAAVHKEVV---------------REALSLYSELQSRGMEPTEFT 326

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            S V++A      +++G++ HG +L++    D ++G++L+D+Y  + C+++    F ++ 
Sbjct: 327 FSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVP 386

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG------- 647
            +++V W ++ISG     LF  A  + +++    +KPD  + +S+++  +          
Sbjct: 387 KQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQ 446

Query: 648 ----QSKEALVIIHHMKNSGIY--------------------PNVVTWTSLISGSLQNEN 683
                +K        M NS I+                     +VV+W+++IS   Q+  
Sbjct: 447 MQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGC 506

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVAT 742
            R++L+FF +M    + PN  T   +L  C   GL+  G +    + ++ G        T
Sbjct: 507 ARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCT 566

Query: 743 GLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
            ++D+  ++G L  A    R S  +     W  ++    I+ + +   L+   ++E   Q
Sbjct: 567 CVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIME--LQ 624

Query: 802 P 802
           P
Sbjct: 625 P 625



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/543 (22%), Positives = 221/543 (40%), Gaps = 116/543 (21%)

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR--NNKLELATRVFDSMKDH 460
           L++CA   +  +   +HG++ ++    +L + N L++ Y R        A R+ D M   
Sbjct: 20  LRSCA---SLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLF-NKMNSSRIQPDIITW-----NCLLSGHFTHGSYQ 514
           N  S+N +I +Y+  G  + +   F +   ++ ++ D  T+      C  +G    G   
Sbjct: 77  NAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVV 136

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
           + L +L                                         GL   ++V  SL+
Sbjct: 137 HALAVL----------------------------------------EGLAEGVFVSNSLV 156

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME--------- 625
            MY +   +  A+ VFD  + R+ V+WNSL+SGY   G      ++   M          
Sbjct: 157 SMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSF 216

Query: 626 ----------------------------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
                                       +  +  DL   +++V  Y+  G   EA+ +  
Sbjct: 217 ALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALF- 275

Query: 658 HMKNSGIYPNVVTWTSLISG------SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
               S + PNVV + ++I+G      ++  E  RE+L  + ++Q   ++P   T SS+++
Sbjct: 276 ---KSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIR 332

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
            C   G ++ GK+IH   LK+ F  D ++ + LID+Y  S  ++     FR    + + +
Sbjct: 333 ACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVT 392

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY----- 826
           W  MI G       + A+ LFHELL  G +PD  T ++++ AC +  +V  G +      
Sbjct: 393 WTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFAT 452

Query: 827 ---FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
              FD  +   N        SC + +  ++G ++ A    + M    D   W A++ S  
Sbjct: 453 KSGFDRFTAMGN--------SC-IHMYARSGNVEAAIQRFQEME-SHDVVSWSAIISSHA 502

Query: 884 IHG 886
            HG
Sbjct: 503 QHG 505



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 199/453 (43%), Gaps = 46/453 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y   GD   A + F +   R    W+S +  Y   G   +E+L V+  +    + 
Sbjct: 154 SLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAH-EEMLRVFALMRRCAMG 212

Query: 292 FRSRILTIILKLCTKLMAFWLGVE--VHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
             S  L  ++K C+       G+   VH  ++K G D D+ L  A+++ Y K   +  A 
Sbjct: 213 LNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAV 272

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKW------ENAIKLFREMQFSSAKAISRTIVKML 403
            LF  V D  + +++N +I    R+E          A+ L+ E+Q    +    T   ++
Sbjct: 273 ALFKSVLD-PNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVI 331

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +AC   G    GKQIHG VLK   + +  + + LI +Y  +  +E   R F S+   ++ 
Sbjct: 332 RACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVV 391

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +W +MIS        + A +LF++                                   +
Sbjct: 392 TWTAMISGCVQNELFERALALFHE-----------------------------------L 416

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
             +G +P+  ++S V+ A   L +++ G +   +  ++G D    +G S + MY ++  +
Sbjct: 417 LGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNV 476

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
           + A + F  M++ ++V+W+++IS +   G    A +  N+M   ++ P+ +++  +++  
Sbjct: 477 EAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTAC 536

Query: 644 SIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLI 675
           S  G   E L     MK   G+ P V   T ++
Sbjct: 537 SHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVV 569


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like
            [Cucumis sativus]
          Length = 697

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/714 (31%), Positives = 364/714 (50%), Gaps = 77/714 (10%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVL---KSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            +K+L+  A       G+ IH ++     +  +S ++  N LI++Y + +++ +A ++FDS
Sbjct: 23   IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M   N+ SW+++++ Y   G     + LF KM    ++ +I                   
Sbjct: 83   MPRRNVVSWSALMAGYMQNGNPLEVFELFKKM---VVKDNIF------------------ 121

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
                         PN   ++  + +  + ++   G++ HGY L++GL++  YV  +L+ +
Sbjct: 122  -------------PNEYVIATAISS-CDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQL 167

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA------------------- 617
            Y K   +  A ++   +   +I  +N +++G         A                   
Sbjct: 168  YSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATY 227

Query: 618  ----------------KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
                            K++  QM + +I  D+   +S++  Y   G           +++
Sbjct: 228  VTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQS 287

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                 NVV+WTS+I+   QNE + E+L  F +M+ + I PN  TM+ L  +  GL  L  
Sbjct: 288  R----NVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCL 343

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            G ++H    K+G   +  V   LI MY KSG++ +A+ VF       + +WN +I G + 
Sbjct: 344  GDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSH 403

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G GKEA+ +F +++ TG +P+ +TF  ++ AC +  LV+EG+ YF+ +   + I+P +E
Sbjct: 404  HGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLE 463

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+C+V LL ++G LDEA +F+R+     D   W  LL +C +H H +     +  L +L
Sbjct: 464  HYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQL 523

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            EP +   Y L+ N+ A   RW+ V  +R  M E  VK     SW++I  + HVF++E   
Sbjct: 524  EPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIK 583

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
            HP    IY  +  L+S+++ LGYVPD   V  DI++E+K   L  H+EKLA+ YGLMKT 
Sbjct: 584  HPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTP 643

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            S API VIKN R+C DCHTA K +S V  R I +RD  RFHHF+ G CSC D W
Sbjct: 644  SGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 218/488 (44%), Gaps = 43/488 (8%)

Query: 228 DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           + + SLI  Y++  + + A K F     R+   WS+ +  Y   G  + E+ E++ ++  
Sbjct: 58  NQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPL-EVFELFKKMVV 116

Query: 288 KGVIFRSR-ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           K  IF +  ++   +  C   M +  G + H   +K G +F  ++K AL+  Y KC DV 
Sbjct: 117 KDNIFPNEYVIATAISSCDSQM-YVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVG 175

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
           +A ++   V    D   +N ++   L++     A+ + + +     +  + T V + + C
Sbjct: 176 AAIQILYTVPG-NDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLC 234

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           A +     GKQ+H  +LKS ++ ++ + + +I MY +   +      FD ++  N+ SW 
Sbjct: 235 ASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWT 294

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           S+I++Y    + + A +LF+KM     + D I                            
Sbjct: 295 SIIAAYFQNEFFEEALNLFSKM-----EIDCIP--------------------------- 322

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
              PN  +++V+  +   L  L  G + H    ++GL  ++ VG +L+ MY K+  +  A
Sbjct: 323 ---PNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAA 379

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
           Q VF NM   NI+ WN++I+G+   GL   A  M   M     +P+ V++  ++   +  
Sbjct: 380 QSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHL 439

Query: 647 GQSKEALVIIHH-MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
               E     +H MK   I P +  +T ++    ++    E+  F   M+   I  +  +
Sbjct: 440 KLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENF---MRSHQINWDVVS 496

Query: 706 MSSLLQTC 713
             +LL  C
Sbjct: 497 WRTLLNAC 504



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 119/518 (22%), Positives = 221/518 (42%), Gaps = 82/518 (15%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDF---DVHLKCALMNFYGKCRDVESANKLFSEVS 356
           +LK+         G  +HA L     ++    V+   +L+N Y KC +V  A KLF  + 
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
              + + W+ ++   ++N       +LF++M        +  ++    +      + EGK
Sbjct: 85  R-RNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEGK 143

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q HGY LKS LE +  V N LI +YS+ + +  A ++                  YT  G
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQIL-----------------YTVPG 186

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                              DI  +N +++G   H      + +L+ + S G   N ++  
Sbjct: 187 ------------------NDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYV 228

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            + +    L+ +  G++ H  +L++ +D D+Y+G+S++DMY K   + + +  FD +++R
Sbjct: 229 TIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSR 288

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----LVSWNS------LVSGYSIW 646
           N+V+W S+I+ Y     F  A  + ++ME + I P+     V +NS      L  G  + 
Sbjct: 289 NVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLH 348

Query: 647 GQSKEA----------LVIIHHMKNSGIYP-----------NVVTWTSLISGSLQNENYR 685
            +++++           +II + K+  I             N++TW ++I+G   +   +
Sbjct: 349 ARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGK 408

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL- 744
           E+L  F  M     +PN  T   ++  C  L L+  G         N  +K   +  GL 
Sbjct: 409 EALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEG-----FYYFNHLMKQFRIVPGLE 463

Query: 745 -----IDMYSKSGNLKSAREVFRK-SANKTLASWNCMI 776
                + + S+SG L  A    R    N  + SW  ++
Sbjct: 464 HYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLL 501


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/619 (32%), Positives = 327/619 (52%), Gaps = 35/619 (5%)

Query: 492  RIQP--DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
            R+ P  ++++W  L+SG   +G +   L     M+  G  PN  +     +AV  LRL  
Sbjct: 16   RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 75

Query: 550  YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
             G++ H   ++ G   D++VG S  DMY K     +A+++FD +  RN+  WN+ IS   
Sbjct: 76   TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 135

Query: 610  FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEALVI--------- 655
              G    A +   +    +  P+ +++ + ++  S W     G     LV+         
Sbjct: 136  TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 195

Query: 656  -----------IHHMKNSGIY------PNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
                          +++S I        N V+W SL++  +QN    ++   +++ +++ 
Sbjct: 196  VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 255

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            ++ +   +SS+L  C G+  L+ G+ IH   +K    +  +V + L+DMY K G ++ + 
Sbjct: 256  VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 315

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF--QPDAITFTALLAACKN 816
            + F +   K L + N +I G+A  G    A+ LF E+   G    P+ +TF +LL+AC  
Sbjct: 316  QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 375

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            +G VE G K FDSM + Y I P  EHYSC+VD+LG+AG ++ A++FI+ MP +P  ++WG
Sbjct: 376  AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 435

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            AL  +CR+HG  +   +A+  LFKL+P +S N+ L+ N  A + RW +   +R  +  VG
Sbjct: 436  ALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVG 495

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            +K    +SWI +   VH F A+   H    EI   L  L +EM+  GY PD +    D++
Sbjct: 496  IKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLE 555

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            EEEK   +  H+EKLA+ +GL+      PIR+ KN R+C DCH+  K++S    REI +R
Sbjct: 556  EEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVR 615

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFH F++G CSC D W
Sbjct: 616  DNNRFHRFKDGICSCKDYW 634



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 210/481 (43%), Gaps = 43/481 (8%)

Query: 245 SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
           SA     L  +R+   W+S +      G     L+E + E+  +GV+          K  
Sbjct: 10  SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFF-EMRREGVVPNDFTFPCAFKAV 68

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
             L     G ++HA  +K G   DV + C+  + Y K R  + A KLF E+ +   +  W
Sbjct: 69  ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE-TW 127

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N  I   + + +   AI+ F E +       S T    L AC+     + G Q+HG VL+
Sbjct: 128 NAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 187

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           S  ++++SVCN LI  Y +  ++  +  +F  M   N  SW S++++Y      + A  L
Sbjct: 188 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 247

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           +      R + DI+  +  +                              +S VL A   
Sbjct: 248 Y-----LRSRKDIVETSDFM------------------------------ISSVLSACAG 272

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
           +  L+ GR  H + ++  ++  ++VG++L+DMY K  C++++++ FD M  +N+V  NSL
Sbjct: 273 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 332

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEI--KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
           I GY  +G    A  +  +M        P+ +++ SL+S  S  G  +  + I   M+++
Sbjct: 333 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 392

Query: 663 -GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
            GI P    ++ ++    +      + +F  +M    I+P  +   +L   C   G  Q 
Sbjct: 393 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP---IQPTISVWGALQNACRMHGKPQL 449

Query: 722 G 722
           G
Sbjct: 450 G 450



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 166/362 (45%), Gaps = 8/362 (2%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
           C        R   + K  HA  +K G+I   D  V    F  Y +      A K F    
Sbjct: 63  CAFKAVASLRLPVTGKQIHALAVKCGRIL--DVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            R+   W++F+ +  +  G  +E +E + E         S      L  C+  +   LG+
Sbjct: 121 ERNLETWNAFISNSVT-DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H  +++ GFD DV +   L++FYGKC+ + S+  +F+E+   ++ + W  ++   ++N
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT-KNAVSWCSLVAAYVQN 238

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + E A  L+   +    +     I  +L ACA +     G+ IH + +K+ +E  + V 
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 298

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM--NSSR 492
           + L+ MY +   +E + + FD M + NL + NS+I  Y   G VD+A +LF +M      
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYG 551
             P+ +T+  LLS     G+ +N + +   M+S  G  P     S ++  +    +++  
Sbjct: 359 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418

Query: 552 RE 553
            E
Sbjct: 419 YE 420



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 109/494 (22%), Positives = 188/494 (38%), Gaps = 71/494 (14%)

Query: 339 YGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
           Y K    ESA +L   ++   + + W  +I    +N  +  A+  F EM+         T
Sbjct: 2   YSKLDHPESA-RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
                +A A +     GKQIH   +K     ++ V      MY +    + A ++FD + 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
           + NL +WN+ IS+    G    A   F +                + GH           
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRR-------------IDGH----------- 156

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
                      PN  +    L A ++   L  G + HG +LR+G D D+ V   L+D Y 
Sbjct: 157 -----------PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 205

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYC-------FKGLFVNAKKMLNQMEEEEIKP 631
           K   +++++ +F  M  +N V+W SL++ Y           L++ ++K + +  +  I  
Sbjct: 206 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 265

Query: 632 DLVSWNSLVS---GYSIWGQSKEALVIIHHMKNSGIY---------------------PN 667
            L +   +     G SI   + +A V       S +                       N
Sbjct: 266 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 325

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDI--KPNSTTMSSLLQTCGGLGLLQNGKEI 725
           +VT  SLI G         +L  F +M        PN  T  SLL  C   G ++NG +I
Sbjct: 326 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 385

Query: 726 -HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYG 783
              +    G    A   + ++DM  ++G ++ A E  +K     T++ W  +     ++G
Sbjct: 386 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 445

Query: 784 NGKEAILLFHELLE 797
             +  +L    L +
Sbjct: 446 KPQLGLLAAENLFK 459



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 34/67 (50%)

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
           MYSK  + +SAR V R +  + + SW  +I G A  G+   A++ F E+   G  P+  T
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 807 FTALLAA 813
           F     A
Sbjct: 61  FPCAFKA 67


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 243/796 (30%), Positives = 397/796 (49%), Gaps = 69/796 (8%)

Query: 313  GVEVHASLIKRGFDFDVHLKCA--LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
            G  VHA +++RG    +   CA  L+N Y K   + +A +LF  + +         +   
Sbjct: 66   GRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGY 125

Query: 371  KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             LR   +E A  LFR +Q                         EG +++ +VL + L+  
Sbjct: 126  ALRG-GFEEAAGLFRRLQ------------------------REGHEVNHFVLTTILK-- 158

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
                  L++M +      +         D N    +S+I +Y+  G V  A  +F+ +  
Sbjct: 159  -----VLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGI-- 211

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
              I  D +TW  ++S +  +   ++ L     M+  G +PN   ++ VL+A   L     
Sbjct: 212  --IWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVL 269

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            G+  HG  ++   D + +VG +L+DMY K   +++A+ VF+ + + +++ W+ LIS Y  
Sbjct: 270  GKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQ 329

Query: 611  KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-----YSIWGQSKEALVI---------- 655
                  A +M  +M    + P+  S + ++       +   GQ    LVI          
Sbjct: 330  SYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFV 389

Query: 656  ----------IHHMKNS-GIY-----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
                        +M+NS  I+      N V+W ++I G  Q+    ++L  F +M+   +
Sbjct: 390  GNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHV 449

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
                 T SS+L+ C     +++  +IH L  K+ F  D  V   LID Y+K G ++ A +
Sbjct: 450  LSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALK 509

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF       + SWN +I G+A++G   +A+ LF+ + ++  +P+ +TF ALL+ C ++GL
Sbjct: 510  VFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGL 569

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            V +G   F+SM+ D+ I P+++HY+C+V LLG+AG L++A  FI  +P  P   +W ALL
Sbjct: 570  VNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALL 629

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             SC +H ++   + ++ ++ ++EP +   Y L+ N+ A +   + V  LR SM  +GVK 
Sbjct: 630  SSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKK 689

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
             +  SW++I   VH FS   A HP    I   L  L  +  + GYVPD   V  D+DEEE
Sbjct: 690  EVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEE 749

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K ++L  H+E+LA+ YGL  T    PIR++KN R C DCHT  K +S +  REI +RD  
Sbjct: 750  KARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDIN 809

Query: 1060 RFHHFREGECSCNDCW 1075
            RFHHF EG CSC D W
Sbjct: 810  RFHHFDEGICSCGDYW 825



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 156/632 (24%), Positives = 274/632 (43%), Gaps = 106/632 (16%)

Query: 172 TSLALPPTDTLAKQAQLS-CISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV 230
            SLALP  D+ A    L  CI+ G              + ++ HA++++ G +   D   
Sbjct: 38  ASLALPKLDSYACARLLQRCIARGDA-----------RAGRAVHARVVQRGGVAQLDTFC 86

Query: 231 KSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
            +++ + Y + G   +A + F     R+   + + ++ Y   GG  +E   ++  L  +G
Sbjct: 87  ANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGG-FEEAAGLFRRLQREG 145

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
                 +LT ILK+   + A  L   +HA   K G D +  +  +L++ Y  C  V  A 
Sbjct: 146 HEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHAR 205

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            +F  +   +D + W  ++     N+  E+A+  F +M+ + AK     +  +L+A   +
Sbjct: 206 CVFDGII-WKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCL 264

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
            +   GK IHG  +K+  ++   V   L+ MY++   +E A  VF+ +            
Sbjct: 265 SSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIP----------- 313

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL---LRGMQSL 526
                                     D+I W+ L+S +    SYQN       LR M+S 
Sbjct: 314 ------------------------HDDVILWSFLISRYAQ--SYQNEQAFEMFLRMMRS- 346

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
              PN  S+S VLQA   +  L  G++ H  +++ G + +L+VG +LMD+Y K   ++N+
Sbjct: 347 SVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENS 406

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM---------------------- 624
            E+F ++++ N V+WN++I GYC  G   +A  +  +M                      
Sbjct: 407 LEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANT 466

Query: 625 -------------EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
                        E+     D +  NSL+  Y+  G  ++AL +      S I  +VV+W
Sbjct: 467 ASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFE----SIIQCDVVSW 522

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            ++ISG   +    ++L+ F +M + D KPN  T  +LL  CG  GL+  G     L L 
Sbjct: 523 NAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQG-----LSLF 577

Query: 732 NGFIKDAYVA------TGLIDMYSKSGNLKSA 757
           N    D  +       T ++ +  ++G L  A
Sbjct: 578 NSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDA 609


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/706 (31%), Positives = 355/706 (50%), Gaps = 67/706 (9%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            V+++Q+CA++GA  EG++IH  + +  L S++ V N L+ MY +   LE A  VF++   
Sbjct: 38   VRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             N+ SW  +I+                                       HG  Q  L L
Sbjct: 98   KNVFSWTILITVCA-----------------------------------QHGRSQEALAL 122

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTE-LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
               M   G +P+  S +  + A +     L  GR  H  + R G    +   TSL+ MY 
Sbjct: 123  FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
            K   L+ + + F++M   N V+WN++I+ +      + A + L +M  E I+   V++ +
Sbjct: 183  KCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYIT 242

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSGI-----------------------------YPNVV 669
            L+S Y    Q K A  I   +  +G                               P+V+
Sbjct: 243  LMSAYDQPSQLKSARYIHDCILRTGFDQDVVNVILNMYGKCGCLQDAEAMFKSMSQPDVI 302

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
             W ++I+   Q+ +  E+L+F+  MQ+E + P+  T  S++  C  LG ++ GK++H   
Sbjct: 303  AWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRL 362

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
                F +   +A  L++MY K G L  AR +F K+A  ++ +WN MI  +A + + ++A 
Sbjct: 363  GDRAF-QVTELANSLVNMYGKCGILDVARSIFDKTAKGSV-TWNAMIGAYAQHSHEQQAF 420

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             LF  +   G +P  ITF ++L+AC N+GL EE   YF  M  D+ + P   HY CMV+ 
Sbjct: 421  ELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVES 480

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            LGKAG L +A   I+ MPF+PD   W + L +CR HG ++  + A++   +++P  S  Y
Sbjct: 481  LGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGY 540

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
              +  + A +  +++  R+R  M + G++     S I++   V+ F+A    +P + EI+
Sbjct: 541  VALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIF 600

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             EL  L  EMK+ GY PD   V  D++  +K  +L +H+E+LAI +G++ T    P+R++
Sbjct: 601  DELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIM 660

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN RVC DCH   K  S +  REI +RD  RFHHF+ G CSC D W
Sbjct: 661  KNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706



 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/557 (22%), Positives = 230/557 (41%), Gaps = 107/557 (19%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +++ C +L A   G  +H  + + G   DV++   L+  YGKC  +E A  +F E +  +
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVF-EATPAK 98

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF-HEGKQI 418
           +   W  +I V  ++ + + A+ LF EM     +  S +    + AC+    F   G+ +
Sbjct: 99  NVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRAL 158

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H  + +   +  +     L+SMYS+   LE + + F+SM + N  SWN+MI+++      
Sbjct: 159 HALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAF------ 212

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL---GFRPNGSSV 535
                                             ++  L  LR +Q +   G R    + 
Sbjct: 213 --------------------------------AEHRRGLEALRTLQKMFLEGIRACSVTY 240

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
             ++ A  +   LK  R  H  ILR G D D  V   +++MY K  CLQ+A+ +F +M  
Sbjct: 241 ITLMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQ 298

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ------- 648
            +++AWN++I+ Y   G    A +    M+EE + PD  ++ S++   +  G        
Sbjct: 299 PDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQV 358

Query: 649 -----------SKEALVIIHHMKNSGIY-----------PNVVTWTSLISGSLQNENYRE 686
                      ++ A  +++     GI               VTW ++I    Q+ + ++
Sbjct: 359 HRRLGDRAFQVTELANSLVNMYGKCGILDVARSIFDKTAKGSVTWNAMIGAYAQHSHEQQ 418

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           + + F+ M+ +  +P+  T  S+L  C   GL +     + +C++              D
Sbjct: 419 AFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHS-YFVCMQQ-------------D 464

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
              + G                   + CM+      G   +A  L   +    F+PD +T
Sbjct: 465 HGVRPGG----------------GHYGCMVESLGKAGRLSDAEALIQGM---PFEPDVLT 505

Query: 807 FTALLAACKNSGLVEEG 823
           +T+ LA C++ G ++ G
Sbjct: 506 WTSFLANCRSHGDMKRG 522



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/588 (20%), Positives = 238/588 (40%), Gaps = 71/588 (12%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFW-LGVEVHASLIKRGFDFDVHL 331
           G  QE L ++ E+  +G+   S   T  +  C+    F   G  +HA L + GF   V  
Sbjct: 114 GRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVA 173

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             +L++ Y KC  +E + K F  +++L + + WN +I     + +   A++  ++M    
Sbjct: 174 TTSLVSMYSKCGSLEESVKTFESMTEL-NAVSWNAMIAAFAEHRRGLEALRTLQKMFLEG 232

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +A S T + ++ A  +       + IH  +L++  + +  V N +++MY +   L+ A 
Sbjct: 233 IRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVILNMYGKCGCLQDAE 290

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
            +F SM   ++ +WN+MI++Y+  G+   A   +  M    + PD  T+  ++    T G
Sbjct: 291 AMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLG 350

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
             +    + R +    F+            VTEL                          
Sbjct: 351 DMEVGKQVHRRLGDRAFQ------------VTEL------------------------AN 374

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           SL++MY K   L  A+ +FD    +  V WN++I  Y        A ++   M  +  +P
Sbjct: 375 SLVNMYGKCGILDVARSIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEP 433

Query: 632 DLVSWNSLVSGYSIWGQSKEA-LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
             +++ S++S  +  G  +EA    +   ++ G+ P    +  ++  SL         + 
Sbjct: 434 SYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVE-SLGKAGRLSDAEA 492

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG---LIDM 747
            IQ      +P+  T +S L  C   G ++ GK       K     D   +TG   L  +
Sbjct: 493 LIQGM--PFEPDVLTWTSFLANCRSHGDMKRGK----FAAKGAIRIDPEASTGYVALARI 546

Query: 748 YSKSGNLKSAREV--------FRKSANKTLASWNCMIMGFAIYGNG--------KEAILL 791
           ++ +G+ + A  +         RK+A +++      +  F               E   L
Sbjct: 547 HADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRL 606

Query: 792 FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
             E+   G+ PD       + A +   L+   + + + ++  + II T
Sbjct: 607 DKEMKRAGYDPDMTHVAHDVEAGQKEPLL---FAHSERLAIAFGIIST 651


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 224/688 (32%), Positives = 354/688 (51%), Gaps = 76/688 (11%)

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
            Q SS    ++T+  +LQ C+ +    E +QIHG +LK+ L                    
Sbjct: 11   QLSSESNAAQTL-HLLQRCSNM---EELRQIHGQMLKTGL-------------------- 46

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
                 + D +    L ++ +  +S    G +  A ++F+++     +P+   WN ++ G+
Sbjct: 47   -----ILDEIPASKLLAFCASPNS----GSLAYARTVFDRI----FRPNTFMWNTMIRGY 93

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                  +  L L   M       N  +   +L+A + +   +  ++ H +I++ G   ++
Sbjct: 94   SNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEI 153

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            Y   SL+++Y K+  +++A+ +FD +  R                               
Sbjct: 154  YTTNSLLNVYSKSGDIKSARLLFDQVDQR------------------------------- 182

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                D VSWNS++ GY+  G+ + A  I +HM       N+++WTS+ISG +     +E+
Sbjct: 183  ----DTVSWNSMIDGYTKCGEIEMAYEIFNHMPER----NIISWTSMISGCVGAGKPKEA 234

Query: 688  LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
            L  F +MQ   IK ++  + S LQ C  LG+L  GK IH    K+    D  +   LIDM
Sbjct: 235  LNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDM 294

Query: 748  YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
            Y+K G+L+ A EVFRK   K ++ W  MI G+AI+G G+EA+  F ++   G +P+ +TF
Sbjct: 295  YAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTF 354

Query: 808  TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
            T +L AC ++GLV E    F+SM   +   P+IEHY CMVDLLG+AG L EA + I  MP
Sbjct: 355  TGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP 414

Query: 868  FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVER 927
             KP+A IWGALL +C IHG+LE  +   + L +++P +   Y  + ++ A +  W    R
Sbjct: 415  VKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAAR 474

Query: 928  LRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            +R  M E GV  +   S I ++   H F A    HP   EI   L  +V  +++ GY P 
Sbjct: 475  VRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPK 534

Query: 988  TRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSL 1047
               +  D++++EK   +  H+EKLA+ +GL+ TK    IR++KN RVC DCHT  K +S 
Sbjct: 535  LGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISK 594

Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
            V  REI +RD  RFH F++G C+C D W
Sbjct: 595  VYAREILMRDRTRFHLFKDGNCTCGDYW 622



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 206/414 (49%), Gaps = 11/414 (2%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRD--VESANKLFSEVSDLEDDLLWNEIIMVKL 372
           ++H  ++K G   D      L+ F        +  A  +F  +    +  +WN +I    
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR-PNTFMWNTMIRGYS 94

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            +++ E A+ L+  M + S    + T   +L+AC+ + A  E +QIH +++K    S + 
Sbjct: 95  NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIY 154

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
             N L+++YS++  ++ A  +FD +   +  SWNSMI  YT  G +++A+ +FN M    
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMP--- 211

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + +II+W  ++SG    G  +  L L   MQ+ G + +  ++   LQA  +L +L  G+
Sbjct: 212 -ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 270

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H YI ++ ++ D  +G  L+DMY K   L+ A EVF  M+ + +  W ++ISGY   G
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTW 671
               A +   +M+   ++P+ +++  +++  S  G   EA ++   M+   G  P++  +
Sbjct: 331 RGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY 390

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             ++    +    +E+ +    M    +KPN+    +LL  C   G L+ GK+I
Sbjct: 391 GCMVDLLGRAGLLKEAEELIENM---PVKPNAAIWGALLNACHIHGNLELGKQI 441



 Score =  129 bits (325), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 175/401 (43%), Gaps = 35/401 (8%)

Query: 186 AQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIF-HYLEFGDFT 244
           +QLS  S+    L+   +   +  ++  H QM+K G I +     K L F      G   
Sbjct: 10  SQLSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLA 69

Query: 245 SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
            A   F   F  +   W++ +  Y S   E +E L ++  +    V   +     +LK C
Sbjct: 70  YARTVFDRIFRPNTFMWNTMIRGY-SNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
           + + A     ++HA +IK GF  +++   +L+N Y K  D++SA  LF +V D  D + W
Sbjct: 129 SSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV-DQRDTVSW 187

Query: 365 NEII-----------------MVKLRN--------------EKWENAIKLFREMQFSSAK 393
           N +I                  +  RN               K + A+ LF  MQ +  K
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
             +  +V  LQACA +G   +GK IH Y+ K  +E +  +   LI MY++   LE A  V
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F  M++  +S W +MIS Y   G    A   F KM ++ ++P+ +T+  +L+     G  
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLV 367

Query: 514 QNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRE 553
                L   M+ + GF+P+      ++  +    LLK   E
Sbjct: 368 HEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEE 408


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/753 (31%), Positives = 369/753 (49%), Gaps = 79/753 (10%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN +I    +   +   + LF+E + S  +    T    L  C +      G+ IH  + 
Sbjct: 9    WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
             S L   + + N LI MY +  +++ A  VF+S  + +  SWNS+I+ Y  +G  D    
Sbjct: 69   VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
            L  KM                     HG   N   L   +++ G   + S          
Sbjct: 129  LLVKM-------------------LRHGLNLNSYALGSALKACGSNFSSS---------- 159

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
                ++ G+  HG  ++ GLD D+ VGT+L+D Y K   L++A ++F  M + N+V +N+
Sbjct: 160  ----IECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNA 215

Query: 604  LISGY----CFKGLFVN-AKKMLNQMEEEEIKPDLVSW---------------------- 636
            +I+G+         F N A  +  +M+   +KP   ++                      
Sbjct: 216  MIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQ 275

Query: 637  -------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                         N+LV  YS+ G  ++ L   H    S    +VV+WTSLI G +QN  
Sbjct: 276  IFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFH----STPKLDVVSWTSLIVGHVQNGQ 331

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
            +   L  F ++     KP+  T+S +L  C  L  +++G++IH   +K G      +   
Sbjct: 332  FEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNS 391

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
             I MY+K G++ SA   F+++ N  + SW+ MI   A +G  KEA+ LF  +  +G  P+
Sbjct: 392  QICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPN 451

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             ITF  +L AC + GLVEEG +YF+ M  D+ I P ++H +C+VDLLG+AG L EA  FI
Sbjct: 452  HITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFI 511

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
                F+ D  +W +LL +CR+H   +  +  + R+ +LEP  +A+Y L+ N+   +    
Sbjct: 512  MDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQM 571

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
                +R+ M + GVK     SWI++  +VH F A    HP +  IY +L  ++ E+KKL 
Sbjct: 572  PATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLD 631

Query: 984  YVPDTRCVYQDIDEEEKGKVLLS-HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            Y+ D + V    + + K   ++S H+EKLA+ +G++     AP+RV+KN R C  CH   
Sbjct: 632  YI-DEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETM 690

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            K  S +  REI LRD  RFH FR+G CSC D W
Sbjct: 691  KLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 215/517 (41%), Gaps = 83/517 (16%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  SLI  Y + G    A   F          W+S +  Y   G    E+L +  ++   
Sbjct: 78  LTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSN-DEMLRLLVKMLRH 136

Query: 289 GVIFRSRILTIILKLCTKLMAFWL--GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
           G+   S  L   LK C    +  +  G  +H   +K G D DV +  AL++ Y K  D+E
Sbjct: 137 GLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLE 196

Query: 347 SANKLFSEVSDLEDDLLWNEII-----MVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
            A K+F  + D  + +++N +I     M  + +E    A+ LF EMQ    K    T   
Sbjct: 197 DATKIFKLMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSS 255

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L+AC+ + AF  GKQIH  + K  L+S+  + N L+ +YS +  +E   + F S     
Sbjct: 256 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP--- 312

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
                                           + D+++W  L+ GH  +G ++  LTL  
Sbjct: 313 --------------------------------KLDVVSWTSLIVGHVQNGQFEGGLTLFH 340

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            +   G +P+  ++S++L A   L  +K G + H Y ++ G+     +  S + MY K  
Sbjct: 341 ELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCG 400

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            + +A   F   KN +IV+W+ +IS         NA+                       
Sbjct: 401 DIDSANMTFKETKNPDIVSWSVMISS--------NAQH---------------------- 430

Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIK 700
                G +KEA+ +   MK SGI PN +T+  ++          E L++F  M+++  I 
Sbjct: 431 -----GCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGIT 485

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
           PN    + ++   G  G L    E     + +GF  D
Sbjct: 486 PNVKHSACIVDLLGRAGRLA---EAESFIMDSGFEGD 519



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/598 (20%), Positives = 245/598 (40%), Gaps = 108/598 (18%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           R+   W+S +  Y   G    E++ ++ E     +       +  L +C + +   LG  
Sbjct: 4   RNVVSWNSLISGYTQMGF-YHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +HA +   G    V L  +L++ Y KC  ++ A  +F    +L D + WN +I   +R  
Sbjct: 63  IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL-DSVSWNSLIAGYVRIG 121

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAK--VGAFHEGKQIHGYVLKSALESNLSV 433
             +  ++L  +M        S  +   L+AC      +   GK +HG  +K  L+ ++ V
Sbjct: 122 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVV 181

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              L+  Y++   LE AT++F  M D N+  +N+MI+              F +M +   
Sbjct: 182 GTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAG-------------FLQMET--- 225

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
                     ++  F +      + L   MQS G +P+  + S +L+A + +   + G++
Sbjct: 226 ----------MADEFAN----EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQ 271

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H  I +  L  D ++G +L+++Y  +  +++  + F +    ++V+W SLI G+   G 
Sbjct: 272 IHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQ 331

Query: 614 FVNAKKMLNQMEEEEIKPD-----------------------------------LVSWNS 638
           F     + +++     KPD                                    +  NS
Sbjct: 332 FEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNS 391

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            +  Y+  G    A +     KN    P++V+W+ +IS + Q+   +E++  F  M+   
Sbjct: 392 QICMYAKCGDIDSANMTFKETKN----PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSG 447

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
           I PN  T   +L  C   GL++ G +    +   +G   +   +  ++D+  ++G L  A
Sbjct: 448 IAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEA 507

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
            E F                                 ++++GF+ D + + +LL+AC+
Sbjct: 508 -ESF---------------------------------IMDSGFEGDPVMWRSLLSACR 531



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 198/438 (45%), Gaps = 20/438 (4%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY- 268
           K  H   +K+G   + D +V  +L+  Y + GD   A K F L    +   +++ +  + 
Sbjct: 164 KMLHGCAVKLG--LDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFL 221

Query: 269 --ESFGGE-VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             E+   E   E + ++ E+  +G+       + ILK C+ + AF  G ++HA + K   
Sbjct: 222 QMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNL 281

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
             D  +  AL+  Y     +E   K F     L D + W  +I+  ++N ++E  + LF 
Sbjct: 282 QSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL-DVVSWTSLIVGHVQNGQFEGGLTLFH 340

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           E+ FS  K    TI  ML ACA + A   G+QIH Y +K+ + +   + N  I MY++  
Sbjct: 341 ELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCG 400

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            ++ A   F   K+ ++ SW+ MISS    G    A  LF  M  S I P+ IT+  +L 
Sbjct: 401 DIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLV 460

Query: 506 GHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGR--ESHGYILRNG 562
                G  +  L     M +  G  PN    + ++       L + GR  E+  +I+ +G
Sbjct: 461 ACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDL-----LGRAGRLAEAESFIMDSG 515

Query: 563 LDYDLYVGTSLMD---MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            + D  +  SL+    ++   D  +   E    ++     ++  L + Y   G+ + A +
Sbjct: 516 FEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATE 575

Query: 620 MLNQMEEEEIKPDL-VSW 636
           + N M++  +K +  +SW
Sbjct: 576 IRNLMKDRGVKKEPGLSW 593



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 45/338 (13%)

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS--GYSI---WG 647
           M  RN+V+WNSLISGY   G +     +  +    +++ D  ++++ +S  G ++    G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 648 QSKEALVIIHHMKNSGIYPN--------------------------VVTWTSLISGSLQN 681
           +   AL+ +  +    +  N                           V+W SLI+G ++ 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG--LGLLQNGKEIHCLCLKNGFIKDAY 739
            +  E L+  ++M +  +  NS  + S L+ CG      ++ GK +H   +K G   D  
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN-----GKEAILLFHE 794
           V T L+D Y+K G+L+ A ++F+   +  +  +N MI GF            EA+ LF E
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
           +   G +P   TF+++L AC      E G K   +    YN+       + +V+L   +G
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECG-KQIHAQIFKYNLQSDEFIGNALVELYSLSG 299

Query: 855 YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
            +++      + P K D   W +L     I GH++  +
Sbjct: 300 SIEDGLKCFHSTP-KLDVVSWTSL-----IVGHVQNGQ 331


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 230/800 (28%), Positives = 397/800 (49%), Gaps = 77/800 (9%)

Query: 313  GVEVHASLIKRGFDFDVHLKCA--LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
            G  VH  +++RG    + L CA  L+N YGK   + SA +LF  + +  + + +  ++  
Sbjct: 78   GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPE-RNMVSFVTLVQA 136

Query: 371  KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
              +   +E A  LFR +++                        EG +++ +VL + L+  
Sbjct: 137  HAQRGDFEAAAALFRRLRW------------------------EGHEVNQFVLTTMLK-- 170

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
                   I+M +      + +  +    DHN    + +I +Y+    V  A  +FN +  
Sbjct: 171  -----LAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGI-- 223

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
              ++ D + W  ++S +  +   +N   +   M+  G +PN  +++ VL+A   L  +  
Sbjct: 224  --VRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            G+  HG  ++   D + +VG +L+DMY K   +++A+  F+ +   +++  + +IS Y  
Sbjct: 282  GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341

Query: 611  KGLFVNAKKMLNQMEEEEIKP-----------------------------------DLVS 635
                  A ++  ++    + P                                   DL  
Sbjct: 342  SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
             N+L+  Y+       +L I   ++++    N V+W +++ G  Q+    E+L  F +MQ
Sbjct: 402  GNALMDFYAKCNDMDSSLKIFSSLRDA----NEVSWNTIVVGFSQSGLGEEALSVFCEMQ 457

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
               +     T SS+L+ C     +++  +IHC   K+ F  D  +   LID Y+K G ++
Sbjct: 458  AAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIR 517

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             A +VF+    + + SWN +I G+A++G   +A+ LF  + ++  + + ITF ALL+ C 
Sbjct: 518  DALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCS 577

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            ++GLV  G   FDSM  D+ I P++EHY+C+V LLG+AG L++A  FI  +P  P A +W
Sbjct: 578  STGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVW 637

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
             ALL SC IH ++     ++ ++ ++EP +   Y L+ N+ A +   + V  LR SM  +
Sbjct: 638  RALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNI 697

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            GV+ V   SW++I   +H FS     HP    I   L  L  +  + GY+PD   V  D+
Sbjct: 698  GVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDV 757

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            D+E+K ++L  H+E+LA+ YGL+ T    PIR++KN R C DCHTA   +S +  REI +
Sbjct: 758  DKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHF +G+CSC D W
Sbjct: 818  RDINRFHHFEDGKCSCGDYW 837



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 140/628 (22%), Positives = 272/628 (43%), Gaps = 94/628 (14%)

Query: 172 TSLALPPT----DTLAKQAQL-SCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNS 226
           TSLA+ P+    D+ A   QL  CI+ G                ++ H  +++ G +   
Sbjct: 46  TSLAILPSVPGVDSFACARQLQGCIARGDA-----------RGGRAVHGHVVRRGGVGRL 94

Query: 227 DDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL 285
           D    +++ + Y + G   SA + F     R+   + + ++ +    G+ +    ++  L
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQ-RGDFEAAAALFRRL 153

Query: 286 HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
             +G      +LT +LKL   + A  L   VH+   K G D +  +   L++ Y  C  V
Sbjct: 154 RWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLV 213

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
             A  +F+ +   +D ++W  ++     N+  ENA ++F +M+ S  K     +  +L+A
Sbjct: 214 SDAEHVFNGIVR-KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
              + +   GK IHG  +K+  ++   V   L+ MY++   ++ A   F+ +   ++   
Sbjct: 273 AVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 332

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           + MIS Y      + A+ LF                                  LR M+S
Sbjct: 333 SFMISRYAQSNQNEQAFELF----------------------------------LRLMRS 358

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
               PN  S+S VLQA T +  L +G++ H + ++ G + DL+VG +LMD Y K + + +
Sbjct: 359 -SVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--------------------- 624
           + ++F ++++ N V+WN+++ G+   GL   A  +  +M                     
Sbjct: 418 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 477

Query: 625 --------------EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
                         E+     D V  NSL+  Y+  G  ++AL +  H+       ++++
Sbjct: 478 TASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMER----DIIS 533

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLC 729
           W ++ISG   +    ++L+ F +M + +++ N  T  +LL  C   GL+ +G  +   + 
Sbjct: 534 WNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMR 593

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSA 757
           + +G        T ++ +  ++G L  A
Sbjct: 594 IDHGIKPSMEHYTCIVRLLGRAGRLNDA 621



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 206/418 (49%), Gaps = 40/418 (9%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +LK    L +  LG  +H   IK   D + H+  AL++ Y KC D++ A   F E+ 
Sbjct: 266 LTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAF-EMI 324

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
             +D +L + +I    ++ + E A +LF  +  SS      ++  +LQAC  +     GK
Sbjct: 325 PYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGK 384

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           QIH + +K   ES+L V N L+  Y++ N ++ + ++F S++D N  SWN+++  ++  G
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSG 444

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             + A S+F +M ++++    +T+                                   S
Sbjct: 445 LGEEALSVFCEMQAAQMPCTQVTY-----------------------------------S 469

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            VL+A      +++  + H  I ++  + D  +G SL+D Y K   +++A +VF ++  R
Sbjct: 470 SVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMER 529

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           +I++WN++ISGY   G   +A ++ ++M +  ++ + +++ +L+S  S  G     L + 
Sbjct: 530 DIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLF 589

Query: 657 HHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             M+ + GI P++  +T ++    +     ++L+F   +      P++    +LL +C
Sbjct: 590 DSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPS---APSAMVWRALLSSC 644


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 256/817 (31%), Positives = 399/817 (48%), Gaps = 81/817 (9%)

Query: 207 LSSVKSKHAQMI--KMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           +   +  H Q+I   MG +      V  L   Y+  G F  A   FF    R    W+  
Sbjct: 27  VQQARQVHTQVIVGGMGDVCAPSSRVLGL---YVLCGRFRDAGNLFFELELRYALPWNWM 83

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +      G     LL  + ++ G  V         ++K C  L    L + VH +    G
Sbjct: 84  IRGLYMLGWFDFALL-FYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLG 142

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F  D+    AL+  Y     +  A ++F E+  L D +LWN ++   +++  ++NAI  F
Sbjct: 143 FHVDLFAGSALIKLYADNGYIRDARRVFDELP-LRDTILWNVMLRGYVKSGDFDNAIGTF 201

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            EM+ S +   S T   +L  CA  G F  G Q+HG V+ S  E +  V N L++MYS+ 
Sbjct: 202 CEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKC 261

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             L  A +                               LFN M     Q D +TWN L+
Sbjct: 262 GNLLYARK-------------------------------LFNTMP----QTDTVTWNGLI 286

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           +G+  +G       L   M S G +P+  + +  L ++ E   L++ +E H YI+R+ + 
Sbjct: 287 AGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVP 346

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
           +D+Y+ ++L+D+Y K   ++ A+++F      ++    ++ISGY   GL ++A      +
Sbjct: 347 FDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWL 406

Query: 625 EEE--------------------EIKP--------------DLVSWNSLVSG-YSIWGQS 649
            +E                     +KP              ++V+  S ++  Y+  G+ 
Sbjct: 407 IQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRL 466

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
             A      M +     + V W S+IS   QN     ++  F QM     K +S ++SS 
Sbjct: 467 DLAYEFFRRMSDR----DSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSA 522

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           L     L  L  GKE+H   ++N F  D +VA+ LIDMYSK GNL  A  VF     K  
Sbjct: 523 LSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNE 582

Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS 829
            SWN +I  +  +G  +E + L+HE+L  G  PD +TF  +++AC ++GLV+EG  YF  
Sbjct: 583 VSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHC 642

Query: 830 MSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLE 889
           M+ +Y I   +EHY+CMVDL G+AG + EA+D I++MPF PDA +WG LLG+CR+HG++E
Sbjct: 643 MTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVE 702

Query: 890 YAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQID 949
            A++ASR L +L+P NS  Y L+ N+ A +  W  V ++R  M E GV+ +  +SWI ++
Sbjct: 703 LAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVN 762

Query: 950 QIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
              H+FSA    HP + EIY  L  L+ E++K GYVP
Sbjct: 763 GGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVP 799



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 151/626 (24%), Positives = 260/626 (41%), Gaps = 79/626 (12%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  + + C+         +VH  +I  G          ++  Y  C     A  LF E+ 
Sbjct: 14  LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFEL- 72

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +L   L WN +I        ++ A+  + +M  S+      T   +++AC  +       
Sbjct: 73  ELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM 132

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H          +L   + LI +Y+ N  +  A RVFD +   +   WN M+  Y   G
Sbjct: 133 VVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSG 192

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             D A   F +M +S    + +T+ C+LS   T G++                       
Sbjct: 193 DFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCA--------------------- 231

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
                         G + HG ++ +G ++D  V  +L+ MY K   L  A+++F+ M   
Sbjct: 232 --------------GTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQT 277

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------VS 641
           + V WN LI+GY   G    A  + N M    +KPD V++ S                V 
Sbjct: 278 DTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVH 337

Query: 642 GYSIWGQS------KEALVIIH----------HMKNSGIYPNVVTWTSLISGSLQNENYR 685
            Y +  +       K AL+ ++           +    I  +V   T++ISG + +    
Sbjct: 338 SYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNI 397

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           +++  F  + QE +  NS TM+S+L  C  +  L+ GKE+HC  LK        V + + 
Sbjct: 398 DAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAIT 457

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
           DMY+K G L  A E FR+ +++    WN MI  F+  G  + AI LF ++  +G + D++
Sbjct: 458 DMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517

Query: 806 TFTALLAACKN-----SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
           + ++ L+A  N      G    G+   ++ S+D  +  T      ++D+  K G L  AW
Sbjct: 518 SLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVAST------LIDMYSKCGNLALAW 571

Query: 861 DFIRTMPFKPDATIWGALLGSCRIHG 886
                M  K + + W +++ +   HG
Sbjct: 572 CVFNLMDGKNEVS-WNSIIAAYGNHG 596



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/529 (22%), Positives = 222/529 (41%), Gaps = 68/529 (12%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           +++  +  + +AC+      + +Q+H  V+   +    +  + ++ +Y    +   A  +
Sbjct: 9   SLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNL 68

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F  ++      WN MI     LG+ D A   + KM  S +                    
Sbjct: 69  FFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVS------------------- 109

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
                           P+  +   V++A   L  +      H      G   DL+ G++L
Sbjct: 110 ----------------PDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSAL 153

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           + +Y  N  +++A+ VFD +  R+ + WN ++ GY   G F NA     +M       + 
Sbjct: 154 IKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNS 213

Query: 634 VSWNSLVS---------------------GYSIWGQSKEALVIIHHMKNSGIYP------ 666
           V++  ++S                     G+    Q    LV ++    + +Y       
Sbjct: 214 VTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNT 273

Query: 667 ----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               + VTW  LI+G +QN    E+   F  M    +KP+S T +S L +    G L++ 
Sbjct: 274 MPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHC 333

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           KE+H   +++    D Y+ + LID+Y K G+++ AR++F+++    +A    MI G+ ++
Sbjct: 334 KEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLH 393

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
           G   +AI  F  L++ G   +++T  ++L AC     ++ G K          +   +  
Sbjct: 394 GLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPG-KELHCHILKKRLENIVNV 452

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
            S + D+  K G LD A++F R M  + D+  W +++ S   +G  E A
Sbjct: 453 GSAITDMYAKCGRLDLAYEFFRRMSDR-DSVCWNSMISSFSQNGKPEIA 500



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 4/186 (2%)

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
           + E +   +T + SL + C    ++Q  +++H   +  G       ++ ++ +Y   G  
Sbjct: 3   KPETLDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRF 62

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           + A  +F +   +    WN MI G  + G    A+L + ++L +   PD  TF  ++ AC
Sbjct: 63  RDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKAC 122

Query: 815 KNSGLVEEGWKYFDSM-STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
                V       D+  S  +++   +   S ++ L    GY+ +A      +P + D  
Sbjct: 123 GGLNNVPLCMVVHDTARSLGFHV--DLFAGSALIKLYADNGYIRDARRVFDELPLR-DTI 179

Query: 874 IWGALL 879
           +W  +L
Sbjct: 180 LWNVML 185


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 230/781 (29%), Positives = 382/781 (48%), Gaps = 69/781 (8%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
            D +L  +L+  Y +C  +ESA  +F +++  +  +LW  +I   +       AI LF  +
Sbjct: 61   DGYLASSLVYMYLRCGSLESAIDVFHKIAH-KSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                    +   V +L AC+       G+ IH   +++ L     V + L+SMY R   L
Sbjct: 120  LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 448  ELATRVFDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
              A  +F  ++ H ++  WN+MI++ +  G    A  +F +M    I PD++T+  +   
Sbjct: 180  RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
              +  S       LR  Q  GF                          H  +   GL  D
Sbjct: 240  CSSSPS-------LRASQVKGF--------------------------HTCLDETGLGSD 266

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------------- 612
            + V T+L++ Y +   +  A+E F  M  RN V+W S+I+ +   G              
Sbjct: 267  VVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLLAVETFHAMLLE 326

Query: 613  --------LF--------VNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVI 655
                    LF        ++  +++  + +E  +  D+     LV  Y+     ++A+ +
Sbjct: 327  GVVPTRSTLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRV 386

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                +  G +   +  T++I+   Q  + R + K +    +  I P+     + L  C  
Sbjct: 387  FS-AREEGEWDAALV-TAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACAS 444

Query: 716  LGLLQNGKEIH-CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
            L  L  G++IH C+       +D  +   ++ MY + G+L+ AR+ F     +   SWN 
Sbjct: 445  LAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNA 504

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            M+   A +G  ++   LF  +L+ GF  + + F  LL+AC ++GLVE G ++F +M+ D+
Sbjct: 505  MLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDH 564

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             ++P  EHY CMVDLLG+ G L +A   ++ MP  PDA  W AL+G+CRI+G  E    A
Sbjct: 565  GVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFA 624

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            + R+ +L   ++A Y  + N+ + + RWED   +R  M ++G++ +   S I+I   VH 
Sbjct: 625  AERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHE 684

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP +  IY EL  ++  +++ GY   T  V  D++EE+K ++L  H+EKLAI 
Sbjct: 685  FVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIA 744

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +G+M T   + +RVIKN RVC DCH A+K++S V GREI +RD  RFHHF++G CSC D 
Sbjct: 745  FGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDY 804

Query: 1075 W 1075
            W
Sbjct: 805  W 805



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/580 (20%), Positives = 234/580 (40%), Gaps = 24/580 (4%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  SL++ YL  G   SA   F     +S   W+  +  Y S G     +  ++  +  +
Sbjct: 64  LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAI-ALFHRILQE 122

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G+   + +   +L  C+       G  +H   ++ G      +  AL++ YG+C  +  A
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
           N LF  +    D +LWN +I    +N     A+++F  M          T V + +AC+ 
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242

Query: 409 VGAFHEG--KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +      K  H  + ++ L S++ V   L++ Y+R  +++ A   F +M + N  SW 
Sbjct: 243 SPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWT 302

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           SMI+++  +G++ +A   F+ M    + P   T    L G     + + V  +    Q +
Sbjct: 303 SMIAAFAQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAI---AQEI 358

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL--RNGLDYDLYVGTSLMDMYVKNDCLQ 584
           G   + + V+ ++ A         G+E    +   R   ++D  + T+++ +Y +    +
Sbjct: 359 GVATDVAIVTDLVMAYARCD----GQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRR 414

Query: 585 NAQEVFDNMKNRN-----IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
           +  +++     R      I+   +L +      L    +       +  +  D+   N++
Sbjct: 415 STFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAI 474

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           VS Y   G  ++A      M       + ++W +++S S Q+    +    F  M QE  
Sbjct: 475 VSMYGQCGSLRDARDAFDGMPAR----DEISWNAMLSASAQHGRVEDCCDLFRAMLQEGF 530

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
                   +LL  C   GL++ G E    +   +G +        ++D+  + G L  A 
Sbjct: 531 DAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAH 590

Query: 759 EVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            + +        A+W  ++    IYG+ +        +LE
Sbjct: 591 GIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLE 630



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 148/364 (40%), Gaps = 33/364 (9%)

Query: 153 TSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKS 212
           T+ +QN    +   I      L +PP         L    S F   + +   R  S VK 
Sbjct: 203 TANSQNGSPREALEIFYRMLQLGIPP--------DLVTFVSVFKACSSSPSLRA-SQVKG 253

Query: 213 KHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
            H  + + G    SD +V + L+  Y   G+   A + F     R+   W+S +  +   
Sbjct: 254 FHTCLDETG--LGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQI 311

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G  +   +E +  +  +GV+     L   L+ C  L    L VE  A  I  G   DV +
Sbjct: 312 GHLLA--VETFHAMLLEGVVPTRSTLFAALEGCEDLHTARL-VEAIAQEI--GVATDVAI 366

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
              L+  Y +C   E A ++FS   + E D  L   +I V  +     +  KL+      
Sbjct: 367 VTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLW------ 420

Query: 391 SAKAISRTI-------VKMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYS 442
              AI R I       +  L ACA + A  EG+QIH  V     L+ ++++ N ++SMY 
Sbjct: 421 -GAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYG 479

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +   L  A   FD M   +  SWN+M+S+    G V+    LF  M       + + +  
Sbjct: 480 QCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLN 539

Query: 503 LLSG 506
           LLS 
Sbjct: 540 LLSA 543



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           +D Y+A+ L+ MY + G+L+SA +VF K A+K++  W  +I  +   G+   AI LFH +
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           L+ G   DAI F ++L+AC +   +  G +     + +  +       S +V + G+ G 
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAG-RLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178

Query: 856 LDEAWDFIRTMPFKPDATIWGALL 879
           L +A      +    D  +W A++
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMI 202


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/731 (30%), Positives = 378/731 (51%), Gaps = 72/731 (9%)

Query: 379  NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            +A+  +R M  + A+    T   +L+ CA+ GA  EG+  H  V+K  L +++   N L+
Sbjct: 103  DALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLV 162

Query: 439  SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            ++Y++                               LG V  A  +F+ M +     DI+
Sbjct: 163  ALYAK-------------------------------LGLVGDAERVFDGMPAR----DIV 187

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            +WN ++ G+ ++G     L   R M  +L    +   V   L A      L  GRE HGY
Sbjct: 188  SWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGY 247

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
             +R+GL+ D+ VGTSL+DMY K   +  A+ VF  M  R +V WN +I GY      V+A
Sbjct: 248  AIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDA 307

Query: 618  KKMLNQMEEEEIKPDLVSWNSLVSG-----YSIWGQSKEALVIIHHM------------- 659
                 QM  +  + ++V+  +L++       S++G+S  A V+  H              
Sbjct: 308  FDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEM 367

Query: 660  --------KNSGIYPNV-----VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
                     +  I+  +     V+W ++I+  +  E Y+E++  F+++  + + P+  TM
Sbjct: 368  YGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTM 427

Query: 707  SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
            ++++     LG ++  K++H   +K G+     +   ++ MY++ GN+ ++RE+F K   
Sbjct: 428  TTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPG 487

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            K + SWN +I+G+AI+G GK A+ +F E+  +G +P+  TF ++L AC  SGL  EGWK 
Sbjct: 488  KDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKE 547

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F+SM  +Y +IP IEHY CM DLLG+AG L E   FI  MP  P + IWG+LL + R   
Sbjct: 548  FNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKN 607

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
             ++ AE A+ R+F+LE  N+  Y ++ ++ A + RWEDVER+R  M E G++     S +
Sbjct: 608  DIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLV 667

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            +++     F      HP + +I+ E   ++S  + +G   D+    +D D       +L 
Sbjct: 668  ELNNKECSFVNGDMSHPQSEKIH-EFSDILS--RNIGEDLDSSSNLRDSDPFASSTTVLP 724

Query: 1007 --HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+ +LA+ +GL+ +++ +P+ V KN RVC+ CH A K +S   GR+I + D   +H F
Sbjct: 725  NKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDTKIYHIF 784

Query: 1065 REGECSCNDCW 1075
             +G C C D W
Sbjct: 785  SDGSCCCGDYW 795



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 232/510 (45%), Gaps = 51/510 (10%)

Query: 207 LSSVKSKHAQMIKMG---KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           L   ++ HA +IK+G    ++ ++    SL+  Y + G    A + F    +R    W++
Sbjct: 136 LGEGRAAHAAVIKLGLGADVYTAN----SLVALYAKLGLVGDAERVFDGMPARDIVSWNT 191

Query: 264 FLEDYESFG-GEVQELLEVWGELHGKGVIFRSRILTI-ILKLCTKLMAFWLGVEVHASLI 321
            ++ Y S G G +   L  + E++    +    +  I  L  C    A  LG E+H   I
Sbjct: 192 MVDGYVSNGMGALA--LACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAI 249

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           + G + DV +  +L++ Y KC +V  A  +F+++  L   + WN +I     NE+  +A 
Sbjct: 250 RHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMP-LRTVVTWNCMIGGYALNERPVDAF 308

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
             F +M+    +    T + +L ACA+  +   G+ +H YV++     ++ +   L+ MY
Sbjct: 309 DCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMY 368

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            +  K+E + ++F  + D  L SWN+MI++Y  +     A +LF ++ +  + PD  T  
Sbjct: 369 GKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFT-- 426

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
                                            ++ V+ A   L  ++  ++ H YI++ 
Sbjct: 427 ---------------------------------MTTVVPAFVLLGSIRQCKQMHSYIVKL 453

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
           G      +  ++M MY +   +  ++E+FD M  +++++WN++I GY   G    A +M 
Sbjct: 454 GYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMF 513

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQ 680
           ++M+   ++P+  ++ S+++  S+ G   E     + M+   G+ P +  +  +     +
Sbjct: 514 DEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGR 573

Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
               RE L+F   M    I P S    SLL
Sbjct: 574 AGELREVLRFIENMP---IAPTSRIWGSLL 600



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 131/603 (21%), Positives = 245/603 (40%), Gaps = 93/603 (15%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF--------FLY--FSRSYAD 260
           + KH +      I +S    KSLI  ++  G    AA AF        FL+    R +AD
Sbjct: 38  RPKHGEGGASRPISSSGSRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFAD 97

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
               L+            L  +  +   G         ++LK C +  A   G   HA++
Sbjct: 98  ADLPLD-----------ALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAV 146

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           IK G   DV+   +L+  Y K   V  A ++F  +    D + WN ++   + N     A
Sbjct: 147 IKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMP-ARDIVSWNTMVDGYVSNGMGALA 205

Query: 381 IKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           +  FREM  +      S  ++  L AC    A   G++IHGY ++  LE ++ V   L+ 
Sbjct: 206 LACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVD 265

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY +   +  A  VF  M                                       ++T
Sbjct: 266 MYCKCGNVFFAENVFAKMPLRT-----------------------------------VVT 290

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           WNC++ G+  +    +       M+  GF+    +   +L A  +     +GR  H Y++
Sbjct: 291 WNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVV 350

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           R      + + T+L++MY K   +++++++F  + ++ +V+WN++I+ Y +  ++  A  
Sbjct: 351 RRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIA 410

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL-------------------VIIHHMK 660
           +  ++  + + PD  +  ++V  + + G  ++                      ++H   
Sbjct: 411 LFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYA 470

Query: 661 NSG-------IY-----PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
             G       I+      +V++W ++I G   +   + +L+ F +M+   ++PN +T  S
Sbjct: 471 RCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVS 530

Query: 709 LLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           +L  C   GL   G KE + +  + G I        + D+  ++G L   REV R   N 
Sbjct: 531 VLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGEL---REVLRFIENM 587

Query: 768 TLA 770
            +A
Sbjct: 588 PIA 590



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 7/218 (3%)

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P       +I G    +   ++L  +  M     +P+  T   +L+ C   G L  G+  
Sbjct: 83  PGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAA 142

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
           H   +K G   D Y A  L+ +Y+K G +  A  VF     + + SWN M+ G+   G G
Sbjct: 143 HAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMG 202

Query: 786 KEAILLFHEL---LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
             A+  F E+   L+ G   D++   A LAAC     +  G +     +  + +   ++ 
Sbjct: 203 ALALACFREMNDALQVGH--DSVGVIAALAACCLESALALG-REIHGYAIRHGLEQDVKV 259

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            + +VD+  K G +  A +    MP +   T W  ++G
Sbjct: 260 GTSLVDMYCKCGNVFFAENVFAKMPLRTVVT-WNCMIG 296



 Score = 43.5 bits (101), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 2/136 (1%)

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           LI  +  +G +  A + F           N MI GFA      +A+  +  +L+ G +PD
Sbjct: 60  LILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPD 119

Query: 804 AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             TF  +L  C  +G + EG +   +      +   +   + +V L  K G + +A    
Sbjct: 120 RFTFPVVLKCCARAGALGEG-RAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 864 RTMPFKPDATIWGALL 879
             MP + D   W  ++
Sbjct: 179 DGMPAR-DIVSWNTMV 193


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/675 (31%), Positives = 359/675 (53%), Gaps = 75/675 (11%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            LQ CA+  +     ++H  ++K+  + +  + N L+ +Y +   +  A ++FD M + + 
Sbjct: 10   LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
             SW S+++++          S+ N M                   FTH            
Sbjct: 70   VSWASILTAHNKALIPRRTLSMLNTM-------------------FTHD----------- 99

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                G +P+    + +++A + L  L+ G++ H   + +    D  V +SL+DMY K   
Sbjct: 100  ----GLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQ 155

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
              +A+ VFD++                   LF N+                VSW S++SG
Sbjct: 156  PDDARAVFDSI-------------------LFKNS----------------VSWTSMISG 180

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK-P 701
            Y+  G+  EA+ +           N+ +WT+LISG +Q+ +   S   F +M++E I   
Sbjct: 181  YARSGRKCEAMDLFLQAP----VRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV 236

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +   +SS++  C  L LL+ GK+IH L +  GF    +++  L+DMY+K  ++ +A+++F
Sbjct: 237  DPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIF 296

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             +   K + SW  +I+G A +G  +EA+ L+ E++ +  +P+ +TF  LL AC ++GLV 
Sbjct: 297  YRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVS 356

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
             G + F SM+TDY+I P+++HY+C++DLL ++G+LDEA + +  +PFKPD   W +LL +
Sbjct: 357  RGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSA 416

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C  H +LE     + R+  L+P + + Y L+ N+ A +  W  V ++R  M  + V+   
Sbjct: 417  CMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEP 476

Query: 942  VWSWIQIDQIVHVFSA-EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
             +S I   +   VF A E   HP   EI   L  L +EM+K GYVP+T  V  DI+++EK
Sbjct: 477  GYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEK 536

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
             K L  H+E+LA+ YGL+K      IR++KN R+C DCH   K++S +  REI +RD  R
Sbjct: 537  EKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATR 596

Query: 1061 FHHFREGECSCNDCW 1075
            +HHF+EG+CSCND W
Sbjct: 597  YHHFKEGKCSCNDFW 611



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 194/434 (44%), Gaps = 23/434 (5%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L+LC +  +     E+H+ +IK GFD    L   L++ YGKC  +  A +LF E+ +  D
Sbjct: 10  LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPN-RD 68

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            + W  I+    +       + +   M      +        +++AC+ +G    GKQ+H
Sbjct: 69  HVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVH 128

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              + S    +  V + LI MY++  + + A  VFDS+   N  SW SMIS Y   G   
Sbjct: 129 ARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKC 188

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV-SVV 538
            A  LF +        ++ +W  L+SG    G      +L   M+  G       V S V
Sbjct: 189 EAMDLFLQAPVR----NLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSV 244

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           +     L LL+ G++ HG ++  G +  L++  +L+DMY K   +  A+++F  M  +++
Sbjct: 245 VGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDV 304

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           ++W S+I G    G    A  + ++M    IKP+ V++  L+   S  G       +   
Sbjct: 305 ISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRS 364

Query: 659 MKNS-GIYPNVVTWTSLI-----SGSL-QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           M     I P++  +T L+     SG L + EN  + + F         KP+  T +SLL 
Sbjct: 365 MTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPF---------KPDEPTWASLLS 415

Query: 712 TCGGLGLLQNGKEI 725
            C     L+ G  I
Sbjct: 416 ACMRHNNLEMGVRI 429



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 34/350 (9%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
           S+    H+Q+IK G    S  +  +L+  Y + G    A + F    +R +  W+S L  
Sbjct: 20  SAAGELHSQIIKAG-FDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTA 78

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           +       + L  +       G+     +   I++ C+ L    LG +VHA  +   F  
Sbjct: 79  HNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCD 138

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           D  +K +L++ Y KC   + A  +F  +   ++ + W  +I    R+ +   A+ LF + 
Sbjct: 139 DEVVKSSLIDMYTKCGQPDDARAVFDSIL-FKNSVSWTSMISGYARSGRKCEAMDLFLQA 197

Query: 388 QFSSAKAISRTIVKMLQA--------------------------------CAKVGAFHEG 415
              +  + +  I  ++Q+                                CA +     G
Sbjct: 198 PVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELG 257

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           KQIHG V+    ES L + N L+ MY++ + +  A  +F  M   ++ SW S+I      
Sbjct: 258 KQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQH 317

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           G  + A +L+++M  SRI+P+ +T+  LL      G       L R M +
Sbjct: 318 GKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTT 367



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 97/449 (21%), Positives = 181/449 (40%), Gaps = 45/449 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGV- 290
           S+I  Y   G    A   F     R+   W++ +      G  +     ++ E+  +G+ 
Sbjct: 176 SMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSF-SLFNEMRREGID 234

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
           I    +L+ ++  C  L    LG ++H  +I  GF+  + +  AL++ Y KC D+ +A  
Sbjct: 235 IVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKD 294

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F  +   +D + W  II+   ++ K E A+ L+ EM  S  K    T V +L AC+  G
Sbjct: 295 IFYRMPR-KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAG 353

Query: 411 AFHEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
               G+++        ++  +L    CL+ + SR+                         
Sbjct: 354 LVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRS------------------------- 388

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
                 G++D A +L +K+     +PD  TW  LLS    H + +  + +    + L  +
Sbjct: 389 ------GHLDEAENLLDKIP---FKPDEPTWASLLSACMRHNNLEMGVRI--ADRVLDLK 437

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           P   S  ++L  V     + +G  S    L + ++     G S +D    +      +  
Sbjct: 438 PEDPSTYILLSNVYAGAEM-WGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESC 496

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS--LVSGYSIWG 647
              MKN        L +    +G   N   +L  +E++E +  L  W+S  L   Y +  
Sbjct: 497 DHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLF-WHSERLAVAYGLLK 555

Query: 648 QSKEALV-IIHHMKNSGIYPNVVTWTSLI 675
                ++ I+ +++  G   NV+ + S I
Sbjct: 556 AVPGTIIRIVKNLRICGDCHNVLKFISDI 584


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/675 (31%), Positives = 358/675 (53%), Gaps = 75/675 (11%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            LQ CA+  +     ++H  ++K+  + +  + N L+ +Y +   +  A ++FD M + + 
Sbjct: 10   LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
             SW S+++++          S+ N M                   FTH            
Sbjct: 70   VSWASILTAHNKALIPRRTLSMLNTM-------------------FTHD----------- 99

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                G +P+    + +++A + L  L+ G++ H   + +    D  V +SL+DMY K   
Sbjct: 100  ----GLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQ 155

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
               A+ VFD++                   LF N+                VSW S++SG
Sbjct: 156  PDEARAVFDSI-------------------LFKNS----------------VSWTSMISG 180

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK-P 701
            Y+  G+  EA+ +           N+ +WT+LISG +Q+ +   S   F +M++E I   
Sbjct: 181  YARSGRKCEAMDLFLQAP----VRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIV 236

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +   +SS++  C  L LL+ GK+IH L +  GF    +++  L+DMY+K  ++ +A+++F
Sbjct: 237  DPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIF 296

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             +   K + SW  +I+G A +G  +EA+ L+ E++ +  +P+ +TF  LL AC ++GLV 
Sbjct: 297  YRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVS 356

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
             G + F SM+TDY+I P+++HY+C++DLL ++G+LDEA + +  +PFKPD   W +LL +
Sbjct: 357  RGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSA 416

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            C  H +LE     + R+  L+P + + Y L+ N+ A +  W  V ++R  M  + V+   
Sbjct: 417  CMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEP 476

Query: 942  VWSWIQIDQIVHVFSA-EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
             +S I   +   VF A E   HP   EI   L  L +EM+K GYVP+T  V  DI+++EK
Sbjct: 477  GYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEK 536

Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
             K L  H+E+LA+ YGL+K      IR++KN R+C DCH   K++S +  REI +RD  R
Sbjct: 537  EKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATR 596

Query: 1061 FHHFREGECSCNDCW 1075
            +HHF+EG+CSCND W
Sbjct: 597  YHHFKEGKCSCNDFW 611



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 194/434 (44%), Gaps = 23/434 (5%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L+LC +  +     E+H+ +IK GFD    L   L++ YGKC  +  A +LF E+ +  D
Sbjct: 10  LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPN-RD 68

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            + W  I+    +       + +   M      +        +++AC+ +G    GKQ+H
Sbjct: 69  HVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVH 128

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
              + S    +  V + LI MY++  + + A  VFDS+   N  SW SMIS Y   G   
Sbjct: 129 ARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKC 188

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV-SVV 538
            A  LF +        ++ +W  L+SG    G      +L   M+  G       V S V
Sbjct: 189 EAMDLFLQAPVR----NLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSV 244

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           +     L LL+ G++ HG ++  G +  L++  +L+DMY K   +  A+++F  M  +++
Sbjct: 245 VGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDV 304

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           ++W S+I G    G    A  + ++M    IKP+ V++  L+   S  G       +   
Sbjct: 305 ISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRS 364

Query: 659 MKNS-GIYPNVVTWTSLI-----SGSL-QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           M     I P++  +T L+     SG L + EN  + + F         KP+  T +SLL 
Sbjct: 365 MTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPF---------KPDEPTWASLLS 415

Query: 712 TCGGLGLLQNGKEI 725
            C     L+ G  I
Sbjct: 416 ACMRHNNLEMGVRI 429



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 34/350 (9%)

Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
           S+    H+Q+IK G    S  +  +L+  Y + G    A + F    +R +  W+S L  
Sbjct: 20  SAAGELHSQIIKAG-FDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTA 78

Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
           +       + L  +       G+     +   I++ C+ L    LG +VHA  +   F  
Sbjct: 79  HNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCD 138

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           D  +K +L++ Y KC   + A  +F  +   ++ + W  +I    R+ +   A+ LF + 
Sbjct: 139 DEVVKSSLIDMYTKCGQPDEARAVFDSIL-FKNSVSWTSMISGYARSGRKCEAMDLFLQA 197

Query: 388 QFSSAKAISRTIVKMLQA--------------------------------CAKVGAFHEG 415
              +  + +  I  ++Q+                                CA +     G
Sbjct: 198 PVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELG 257

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           KQIHG V+    ES L + N L+ MY++ + +  A  +F  M   ++ SW S+I      
Sbjct: 258 KQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQH 317

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           G  + A +L+++M  SRI+P+ +T+  LL      G       L R M +
Sbjct: 318 GKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTT 367



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 97/449 (21%), Positives = 181/449 (40%), Gaps = 45/449 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGV- 290
           S+I  Y   G    A   F     R+   W++ +      G  +     ++ E+  +G+ 
Sbjct: 176 SMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSF-SLFNEMRREGID 234

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
           I    +L+ ++  C  L    LG ++H  +I  GF+  + +  AL++ Y KC D+ +A  
Sbjct: 235 IVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKD 294

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F  +   +D + W  II+   ++ K E A+ L+ EM  S  K    T V +L AC+  G
Sbjct: 295 IFYRMPR-KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAG 353

Query: 411 AFHEGKQI-HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
               G+++        ++  +L    CL+ + SR+                         
Sbjct: 354 LVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRS------------------------- 388

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
                 G++D A +L +K+     +PD  TW  LLS    H + +  + +    + L  +
Sbjct: 389 ------GHLDEAENLLDKIP---FKPDEPTWASLLSACMRHNNLEMGVRI--ADRVLDLK 437

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           P   S  ++L  V     + +G  S    L + ++     G S +D    +      +  
Sbjct: 438 PEDPSTYILLSNVYAGAEM-WGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESC 496

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS--LVSGYSIWG 647
              MKN        L +    +G   N   +L  +E++E +  L  W+S  L   Y +  
Sbjct: 497 DHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLF-WHSERLAVAYGLLK 555

Query: 648 QSKEALV-IIHHMKNSGIYPNVVTWTSLI 675
                ++ I+ +++  G   NV+ + S I
Sbjct: 556 AVPGTIIRIVKNLRICGDCHNVLKFISDI 584


>gi|357146631|ref|XP_003574060.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Brachypodium distachyon]
          Length = 735

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/714 (31%), Positives = 365/714 (51%), Gaps = 28/714 (3%)

Query: 364  WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
            WN II   ++N +++ A+ +F+EM   +    + T+  +L AC  + A   GKQ+H YV+
Sbjct: 48   WNCIISGCVQNSRYDEALGIFQEM-CETEMPDAVTVASILPACTGLMALGIGKQLHSYVV 106

Query: 424  KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            +  ++ N+ + + LI MYS   +   A  VF ++ + N++ WN +I SY   G +D AW 
Sbjct: 107  RCGIKLNVYIGSSLIGMYSECRQFAYARSVFSAIDERNVTVWNELIQSYINDGRMDKAWE 166

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
             FN M    ++PDI+T+N  +SG+   G  +    LL GM +   +P   S++ ++  + 
Sbjct: 167  AFNLMQEDGLEPDIVTYNSFISGYARTGQKELAYELLSGMANFSLKPTVISMNALISGLH 226

Query: 544  ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
               L     E+  Y+     +   +        +  N  +Q            N     S
Sbjct: 227  HYGLCADALEAFRYMQLPNREAKHW------SFHDNNSPIQ-----------PNGTTITS 269

Query: 604  LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
            ++S      L    K++        +  ++   + LV  Y   G    A      ++N  
Sbjct: 270  VLSLLTDLKLHRFGKEVHCYALRNGLTSNIFVSSKLVDLYGKTGDMVSAANFFQGIRNK- 328

Query: 664  IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               NVVTW SL++    N     +LK F +M + D+ PN  TM  +L + G    L+ G+
Sbjct: 329  ---NVVTWNSLLAAYKHNRKPEVALKLFYEMLKSDLLPNLVTMHIVLLSSGMTMALRYGR 385

Query: 724  EIHCLCLKNGF--IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
            E+H    KN F    D  +AT LIDMY K G +  AR VF  +  K +A WN M+  + +
Sbjct: 386  ELHGYINKNWFGGYPDT-LATALIDMYGKCGKIDDARLVFECTVEKDIAVWNAMMSCYLL 444

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +   ++   LF  +  +  QPD +TF  LL+ACK  G +EE   Y  SM   Y I PT++
Sbjct: 445  HRMPRDVKRLFKYIEHSRIQPDHVTFVILLSACKQEGSMEEARSYLYSMEDLYCIKPTLK 504

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY+CMVD++G AG L+E+ + I+ MP +PDA +W  +L +C++H +LE A+ A++ LF+L
Sbjct: 505  HYTCMVDIMGTAGLLEESLELIQKMPLEPDACLWSTVLKACKLHSNLEVADKAAKALFEL 564

Query: 902  EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP 961
            EP N++NY  + N+ A +  W+  + +R +M E G+      S + +   V  F A    
Sbjct: 565  EPNNTSNYMALSNIYANNGLWDFTDSVRDAMTEQGLHVERQCSLLYLGTNVDSFEAGVMS 624

Query: 962  HPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTK 1021
            HPA   I      + S M++ GY P     Y ++   E   +   HTE++A+ YGL+   
Sbjct: 625  HPAFENILNAWKDVASRMEQSGYAPQDNEPYCNV---EVDPLSCHHTERIAVCYGLISMC 681

Query: 1022 SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +  PIRV KN R+C +CH++ K++S  + R+IF+ DG  +HHF  G CSC D W
Sbjct: 682  AHEPIRVSKNFRMCKECHSSMKFISRDKNRQIFISDGCTYHHFSNGSCSCGDMW 735



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 237/463 (51%), Gaps = 44/463 (9%)

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           SWN+++S +   G +  A  LF++M    ++P + +WNC++SG   +  Y   L + + M
Sbjct: 12  SWNTLVSGFARNGDLGAALHLFDEMRLRGVKPRVSSWNCIISGCVQNSRYDEALGIFQEM 71

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
                 P+  +V+ +L A T L  L  G++ H Y++R G+  ++Y+G+SL+ MY +    
Sbjct: 72  CETEM-PDAVTVASILPACTGLMALGIGKQLHSYVVRCGIKLNVYIGSSLIGMYSECRQF 130

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             A+ VF  +  RN+  WN LI  Y   G    A +  N M+E+ ++PD+V++NS +SGY
Sbjct: 131 AYARSVFSAIDERNVTVWNELIQSYINDGRMDKAWEAFNLMQEDGLEPDIVTYNSFISGY 190

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-------- 695
           +  GQ + A  ++  M N  + P V++  +LISG        ++L+ F  MQ        
Sbjct: 191 ARTGQKELAYELLSGMANFSLKPTVISMNALISGLHHYGLCADALEAFRYMQLPNREAKH 250

Query: 696 ------QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
                    I+PN TT++S+L     L L + GKE+HC  L+NG   + +V++ L+D+Y 
Sbjct: 251 WSFHDNNSPIQPNGTTITSVLSLLTDLKLHRFGKEVHCYALRNGLTSNIFVSSKLVDLYG 310

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           K+G++ SA   F+   NK + +WN ++  +      + A+ LF+E+L++   P+ +T   
Sbjct: 311 KTGDMVSAANFFQGIRNKNVVTWNSLLAAYKHNRKPEVALKLFYEMLKSDLLPNLVTMHI 370

Query: 810 LLAACKNS----------GLVEEGW--KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
           +L +   +          G + + W   Y D+++T             ++D+ GK G +D
Sbjct: 371 VLLSSGMTMALRYGRELHGYINKNWFGGYPDTLAT------------ALIDMYGKCGKID 418

Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
           +A   +     + D  +W A++ SC +   L       +RLFK
Sbjct: 419 DA-RLVFECTVEKDIAVWNAMM-SCYL---LHRMPRDVKRLFK 456



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/566 (21%), Positives = 230/566 (40%), Gaps = 154/566 (27%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL  CT LMA  +G ++H+ +++ G   +V++  +L+  Y +CR    A  +FS + D  
Sbjct: 85  ILPACTGLMALGIGKQLHSYVVRCGIKLNVYIGSSLIGMYSECRQFAYARSVFSAI-DER 143

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +  +WNE+I   + + + + A + F  MQ                               
Sbjct: 144 NVTVWNELIQSYINDGRMDKAWEAFNLMQ------------------------------- 172

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
               +  LE ++   N  IS Y+R  + ELA  +   M + +L                 
Sbjct: 173 ----EDGLEPDIVTYNSFISGYARTGQKELAYELLSGMANFSL----------------- 211

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ--------------S 525
                         +P +I+ N L+SG   +G   + L   R MQ              +
Sbjct: 212 --------------KPTVISMNALISGLHHYGLCADALEAFRYMQLPNREAKHWSFHDNN 257

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
              +PNG++++ VL  +T+L+L ++G+E H Y LRNGL  +++V + L+D+Y K   + +
Sbjct: 258 SPIQPNGTTITSVLSLLTDLKLHRFGKEVHCYALRNGLTSNIFVSSKLVDLYGKTGDMVS 317

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS---------- 635
           A   F  ++N+N+V WNSL++ Y        A K+  +M + ++ P+LV+          
Sbjct: 318 AANFFQGIRNKNVVTWNSLLAAYKHNRKPEVALKLFYEMLKSDLLPNLVTMHIVLLSSGM 377

Query: 636 -----------------W---------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                            W          +L+  Y   G+  +A ++        +  ++ 
Sbjct: 378 TMALRYGRELHGYINKNWFGGYPDTLATALIDMYGKCGKIDDARLVFE----CTVEKDIA 433

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            W +++S  L +   R+  + F  ++   I+P+  T   LL  C   G ++  +      
Sbjct: 434 VWNAMMSCYLLHRMPRDVKRLFKYIEHSRIQPDHVTFVILLSACKQEGSMEEAR------ 487

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
                   +Y+ + + D+Y                   TL  + CM+      G  +E++
Sbjct: 488 --------SYLYS-MEDLY---------------CIKPTLKHYTCMVDIMGTAGLLEESL 523

Query: 790 LLFHELLETGFQPDAITFTALLAACK 815
            L  ++     +PDA  ++ +L ACK
Sbjct: 524 ELIQKM---PLEPDACLWSTVLKACK 546



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 130/243 (53%), Gaps = 2/243 (0%)

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M+   ++PD++SWN+LVSG++  G    AL +   M+  G+ P V +W  +ISG +QN  
Sbjct: 1   MQASGVRPDVISWNTLVSGFARNGDLGAALHLFDEMRLRGVKPRVSSWNCIISGCVQNSR 60

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
           Y E+L  F +M + ++ P++ T++S+L  C GL  L  GK++H   ++ G   + Y+ + 
Sbjct: 61  YDEALGIFQEMCETEM-PDAVTVASILPACTGLMALGIGKQLHSYVVRCGIKLNVYIGSS 119

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           LI MYS+      AR VF     + +  WN +I  +   G   +A   F+ + E G +PD
Sbjct: 120 LIGMYSECRQFAYARSVFSAIDERNVTVWNELIQSYINDGRMDKAWEAFNLMQEDGLEPD 179

Query: 804 AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
            +T+ + ++    +G  E  ++    M+ ++++ PT+   + ++  L   G   +A +  
Sbjct: 180 IVTYNSFISGYARTGQKELAYELLSGMA-NFSLKPTVISMNALISGLHHYGLCADALEAF 238

Query: 864 RTM 866
           R M
Sbjct: 239 RYM 241



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 2/231 (0%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           +T +L L T L     G EVH   ++ G   ++ +   L++ YGK  D+ SA   F  + 
Sbjct: 267 ITSVLSLLTDLKLHRFGKEVHCYALRNGLTSNIFVSSKLVDLYGKTGDMVSAANFFQGIR 326

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           + ++ + WN ++     N K E A+KLF EM  S       T+  +L +     A   G+
Sbjct: 327 N-KNVVTWNSLLAAYKHNRKPEVALKLFYEMLKSDLLPNLVTMHIVLLSSGMTMALRYGR 385

Query: 417 QIHGYVLKSALESNL-SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           ++HGY+ K+       ++   LI MY +  K++ A  VF+   + +++ WN+M+S Y   
Sbjct: 386 ELHGYINKNWFGGYPDTLATALIDMYGKCGKIDDARLVFECTVEKDIAVWNAMMSCYLLH 445

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
                   LF  +  SRIQPD +T+  LLS     GS +   + L  M+ L
Sbjct: 446 RMPRDVKRLFKYIEHSRIQPDHVTFVILLSACKQEGSMEEARSYLYSMEDL 496



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 3/185 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L+  Y + GD  SAA  F    +++   W+S L  Y+    + +  L+++ E+    ++ 
Sbjct: 305 LVDLYGKTGDMVSAANFFQGIRNKNVVTWNSLLAAYK-HNRKPEVALKLFYEMLKSDLLP 363

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKL 351
               + I+L      MA   G E+H  + K  F  +   L  AL++ YGKC  ++ A  +
Sbjct: 364 NLVTMHIVLLSSGMTMALRYGRELHGYINKNWFGGYPDTLATALIDMYGKCGKIDDARLV 423

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E +  +D  +WN ++   L +    +  +LF+ ++ S  +    T V +L AC + G+
Sbjct: 424 F-ECTVEKDIAVWNAMMSCYLLHRMPRDVKRLFKYIEHSRIQPDHVTFVILLSACKQEGS 482

Query: 412 FHEGK 416
             E +
Sbjct: 483 MEEAR 487


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/641 (33%), Positives = 346/641 (53%), Gaps = 38/641 (5%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            N++IS Y   G V +A ++F+ M       + ++ N L+SG+ + G ++  L LLR    
Sbjct: 49   NNLISFYAKCGRVGLARTVFDAMPFR----NAVSANLLMSGYASSGRHKESLQLLR---V 101

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            + F  N   +S  + A   +R    GR+ HGY ++ G     YV  +++ MY +   +++
Sbjct: 102  VDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMED 161

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL------ 639
            A +VF+++   +  A+NS+I+GY  +G    +  ++  M  E  K D VS+ ++      
Sbjct: 162  ASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCAS 221

Query: 640  ----VSGYSIWGQS-----------KEALVIIH----HMKNSG----IYP--NVVTWTSL 674
                V G  +  Q+             ALV ++    H+ ++     + P  NVV+WT++
Sbjct: 222  MKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAV 281

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            ++   QNE Y ++L+ F+ M+ E ++PN  T +  L +C GL  L+ G  +    +K G 
Sbjct: 282  MTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGH 341

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                 V+  L++MYSKSG+++ A  VF     + + SWN +I G+A +G  +E +  FH 
Sbjct: 342  WDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHS 401

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +L     P  +TF  +L+AC   GLV+E + Y ++M  +  I P  EHY+CMV LL + G
Sbjct: 402  MLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVG 461

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             LDEA  FI       D   W +LL SC+++ +       + ++ +LEP +   Y L+ N
Sbjct: 462  RLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSN 521

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A +NRW+ V ++R  M E  V+     SWI +   VHVF++E   HP   +I  +L  
Sbjct: 522  MYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEE 581

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            L+ ++K +GYVP+   V  DID+E K + L+ H+EKLA+ +GL+ T   A I ++KN R+
Sbjct: 582  LIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRI 641

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH A K +S+V  R+I +RD  RFH    G CSCND W
Sbjct: 642  CDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 218/514 (42%), Gaps = 58/514 (11%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           LS  K+ HA++I         D+V   +LI  Y + G    A   F     R+    +  
Sbjct: 27  LSKGKALHARLITAAHF----DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLL 82

Query: 265 LEDYESFG--GEVQELLEV--WGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           +  Y S G   E  +LL V  +G            +L+  +     + ++ +G + H   
Sbjct: 83  MSGYASSGRHKESLQLLRVVDFG--------MNEYVLSAAVSATANVRSYDMGRQCHGYA 134

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           +K GF    ++  A++  Y +C  +E A+K+F  VS   D   +N +I   L   + + +
Sbjct: 135 VKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGF-DAFAFNSMINGYLDRGQLDGS 193

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           + + R M   + K    + V +L  CA +     G Q+H   LK  LE N+ V + L+ M
Sbjct: 194 LGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDM 253

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           Y + + +  A R F+ + + N+ SW +++++YT     + A  LF  M    +QP+  T+
Sbjct: 254 YGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTY 313

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
                                              +V L +   L  L+ G      +++
Sbjct: 314 -----------------------------------AVALNSCAGLAALRTGNALGACVMK 338

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
            G    L V  +LM+MY K+  +++A  VF +M  R++V+WN +I+GY   GL     + 
Sbjct: 339 TGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEA 398

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH-HMKNSGIYPNVVTWTSLISGSL 679
            + M    + P  V++  ++S  +  G   EA   ++  MK  GI P    +T ++    
Sbjct: 399 FHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLC 458

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +     E+ +F +      I  +     SLL +C
Sbjct: 459 RVGRLDEAERFIV---NNCIGTDVVAWRSLLNSC 489



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/514 (21%), Positives = 214/514 (41%), Gaps = 91/514 (17%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA LI     FDV L   L++FY KC  V  A  +F  +    + +  N ++    
Sbjct: 30  GKALHARLITAAH-FDVVLHNNLISFYAKCGRVGLARTVFDAMP-FRNAVSANLLMSGYA 87

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            + + + +++L R + F   + +    V    A A V ++  G+Q HGY +K+       
Sbjct: 88  SSGRHKESLQLLRVVDFGMNEYVLSAAV---SATANVRSYDMGRQCHGYAVKAGFAEQRY 144

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N ++ MY +   +E A++VF+S+   +  ++NSMI+ Y   G +D +  +   M    
Sbjct: 145 VFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEA 204

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + D +++  +L GH                                     ++    G 
Sbjct: 205 EKWDYVSYVAVL-GH----------------------------------CASMKDSVLGA 229

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + H   L+  L+ ++YVG++L+DMY K D + +A   F+ +  +N+V+W ++++ Y    
Sbjct: 230 QVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNE 289

Query: 613 LFVNAKKMLNQMEEEEIKPD-----------------------------------LVSWN 637
           L+ +A ++   ME E ++P+                                   L+  N
Sbjct: 290 LYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSN 349

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           +L++ YS  G  ++A    H +  S    +VV+W  +I+G   +   RE ++ F  M   
Sbjct: 350 ALMNMYSKSGSIEDA----HRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSA 405

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG------LIDMYSKS 751
            + P+  T   +L  C  LGL+            N  +K+  +  G      ++ +  + 
Sbjct: 406 AVIPSYVTFVGVLSACAQLGLVDEA-----FYYLNTMMKEVGITPGKEHYTCMVGLLCRV 460

Query: 752 GNLKSA-REVFRKSANKTLASWNCMIMGFAIYGN 784
           G L  A R +        + +W  ++    +Y N
Sbjct: 461 GRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKN 494


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/612 (34%), Positives = 333/612 (54%), Gaps = 18/612 (2%)

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
            I+S   L Y   A+ LF +    R    +   N L+ G+ + G  +  + L   M  LG 
Sbjct: 70   IASPESLDYARKAFELFKE--DVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGV 127

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
             PN  +   VL   T++     G + HG +++ GL+ D+++   L+  Y +   + +  +
Sbjct: 128  TPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHK 187

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
            VF+ M  RN+V+W SLI GY        A  +  +M  +      V  N+LV  Y   G 
Sbjct: 188  VFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMLNK------VMVNALVDMYMKCG- 240

Query: 649  SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
               A+     + +  +  N+V + +++S   +    RE+L    +M Q+  +P+  TM S
Sbjct: 241  ---AIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLS 297

Query: 709  LLQTCGGL-----GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
             +     L     G + +G  +H    KNG   D  + T L+DM+++ G+ +SA +VF K
Sbjct: 298  AISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNK 357

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
               + +++W   I   A+ GNG+ A  LF+++L  G +PD + F  +L AC + G VE+G
Sbjct: 358  MTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQG 417

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F S+  D+ I P IEHY CMVDLLG+AG L EA+D I++MP +P+  +WG+LL +CR
Sbjct: 418  LHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACR 476

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +H ++E A  A+ R+ +L P  +  + L+ N+ A + +W DV R+R ++ E GV+ V   
Sbjct: 477  VHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGS 536

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S +Q++ ++H F++    HP    I   L  +       G++PD   V  D+DE+EK  +
Sbjct: 537  SSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYL 596

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
            L  H+EKLAI +GL+ T    PIRV+KN R+CSDCH+ AK  S++  REI +RD  RFH 
Sbjct: 597  LSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHF 656

Query: 1064 FREGECSCNDCW 1075
            FR+G CSC D W
Sbjct: 657  FRQGLCSCCDYW 668



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 193/440 (43%), Gaps = 48/440 (10%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVES------ANKLFSEVSDLEDDL-LWNEI 367
           ++H  + K G D        L+N   +    ES      A +LF E    +D L + N +
Sbjct: 43  QLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSL 102

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I           AI L+  M          T   +L  C K+ AF EG Q+HG V+K  L
Sbjct: 103 IRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGL 162

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT-------------- 473
           E ++ + NCLI  Y+    ++   +VF+ M + N+ SW S+I  Y               
Sbjct: 163 EEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFE 222

Query: 474 ---------------GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
                            G +D A  LF++     +  +++ +N +LS +   G  +  L 
Sbjct: 223 MLNKVMVNALVDMYMKCGAIDAAKRLFDEC----VDRNLVLYNTILSNYARQGLAREALA 278

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG-----YILRNGLDYDLYVGTSL 573
           +L  M   G RP+  ++   + A  +L  L YG+  HG     YI +NG+  D+ + T+L
Sbjct: 279 ILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTAL 338

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           +DM+ +    Q+A +VF+ M  R++ AW + I     +G    A  + NQM  + +KPD+
Sbjct: 339 VDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDV 398

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           V +  +++  S  GQ ++ L I   M++ GI P +  +  ++    +    RE+      
Sbjct: 399 VLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKS 458

Query: 694 MQQEDIKPNSTTMSSLLQTC 713
           M  E   PN     SLL  C
Sbjct: 459 MPME---PNDVVWGSLLAAC 475



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 141/334 (42%), Gaps = 13/334 (3%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           MV +L+  Y++ G   +A + F     R+   +++ L +Y +  G  +E L +  E+  +
Sbjct: 228 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNY-ARQGLAREALAILDEMLQQ 286

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVE-----VHASLIKRGFDFDVHLKCALMNFYGKCR 343
           G       +   +    +L+  + G       VH  + K G   D+ L  AL++ + +C 
Sbjct: 287 GPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCG 346

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
           D +SA ++F+++++  D   W   I         E A  LF +M     K      V++L
Sbjct: 347 DPQSAMQVFNKMTE-RDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVL 405

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNL 462
            AC+  G   +G  I   +    +   +    C++ +  R   L  A  +  SM  + N 
Sbjct: 406 TACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPND 465

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLR 521
             W S++++      V++A     ++N   + P     + LLS  + + G + +V  +  
Sbjct: 466 VVWGSLLAACRVHKNVEMATYAAERIN--ELAPQRAGVHVLLSNIYASAGKWTDVARVRL 523

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
            ++  G R    S SV +  V  +     G ESH
Sbjct: 524 NLREKGVRKVPGSSSVQVNGV--IHEFTSGDESH 555



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 13/195 (6%)

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           Q+++ D     + ++  L+ C  L  L   K++HC   KNG  +     T L++  ++  
Sbjct: 15  QIKEADPMTKDSCLNESLRCCKTLNQL---KQLHCQITKNGLDQIPSTLTKLVNAGAEIA 71

Query: 753 NLKS------AREVFRKS--ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           + +S      A E+F++   ++  L   N +I G++  G G+EAILL+  +L  G  P+ 
Sbjct: 72  SPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNH 131

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            TF  +L+ C       EG +   S+     +   +   +C++    + G++D       
Sbjct: 132 YTFPFVLSGCTKIAAFCEGIQVHGSV-VKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFE 190

Query: 865 TMPFKPDATIWGALL 879
            M  + +   W +L+
Sbjct: 191 GMSER-NVVSWTSLI 204


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/623 (32%), Positives = 333/623 (53%), Gaps = 42/623 (6%)

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK- 549
            S   P ++++   +SG   HG     L+   GM  LG RPN  +     +A         
Sbjct: 76   SDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRST 135

Query: 550  YGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
             G + H   +R G L  D +V  + +DMY K   L+ A+ +F  M NRN+VAWN++++  
Sbjct: 136  IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNA 195

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVS--------------------------------- 635
               G  +   +    + E    P++VS                                 
Sbjct: 196  VLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDV 255

Query: 636  --WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
               NS+V  Y     + +A  +   M   G+  N V+W S+++   QN    E+   ++ 
Sbjct: 256  SVLNSMVDFYGKCRCAGKARAVFDGM---GVR-NSVSWCSMVAAYAQNGAEEEAFAAYLG 311

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
             ++   +P    +SS L TC GL  L  G+ +H + +++    + +VA+ L+DMY K G 
Sbjct: 312  ARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGC 371

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFTALLA 812
            ++ A ++F ++  + L +WN MI G+A  G+ + A+L+F +++ +G   P+ IT   ++ 
Sbjct: 372  VEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVIT 431

Query: 813  ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            +C   GL ++G++ F++M   + I P  EHY+C+VDLLG+AG  ++A++ I+ MP +P  
Sbjct: 432  SCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSI 491

Query: 873  TIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
            ++WGALLG+C++HG  E   IA+ +LF+L+P +S N+ L+ N+ A + RW +   +R  M
Sbjct: 492  SVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEM 551

Query: 933  DEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVY 992
              VG+K     SW+    +VHVF A+   H    EI   L  L  +M+  GY+PDT+   
Sbjct: 552  KNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSL 611

Query: 993  QDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGRE 1052
             D++EEEK   +  H+EKLA+ +GL+      PIR++KN R+C DCH A K++S + GRE
Sbjct: 612  YDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGRE 671

Query: 1053 IFLRDGARFHHFREGECSCNDCW 1075
            I +RD  RFHHF++ +CSC D W
Sbjct: 672  IIVRDNNRFHHFKQYQCSCGDYW 694



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 179/415 (43%), Gaps = 42/415 (10%)

Query: 312 LGVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
           +G ++H+  I+ G+   D  + CA ++ Y K   ++ A  LF E+ +  + + WN ++  
Sbjct: 136 IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPN-RNVVAWNAVMTN 194

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
            + + +    I+ +  ++ +       +      ACA       G+Q HG+V+K   E +
Sbjct: 195 AVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMD 254

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           +SV N ++  Y +      A  VFD M   N  SW SM+++Y                  
Sbjct: 255 VSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYA----------------- 297

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                              +G+ +       G +  G  P    VS  L     L  L  
Sbjct: 298 ------------------QNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 339

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           GR  H   +R+ +D +++V ++L+DMY K  C+++A+++F     RN+V WN++I GY  
Sbjct: 340 GRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAH 399

Query: 611 KGLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNV 668
            G   NA  + + M    E  P+ ++  ++++  S  G +K+   +   M+   GI P  
Sbjct: 400 IGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRT 459

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             +  ++   L      E   + + +Q   ++P+ +   +LL  C   G  + G+
Sbjct: 460 EHYACVV--DLLGRAGMEEQAYEV-IQGMPMRPSISVWGALLGACKMHGKTELGR 511



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 120/554 (21%), Positives = 218/554 (39%), Gaps = 71/554 (12%)

Query: 176 LPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSK-------HAQMIKMGKIWNSDD 228
           LP     A   +L    + F F    + F+  +S   +       H+  I+ G +     
Sbjct: 99  LPALSAFAGMLRLGLRPNDFTF---PSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPF 155

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  + +  Y + G    A   F    +R+   W++ + +     G   E +E +  L   
Sbjct: 156 VSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTN-AVLDGRPLETIEAYFGLREA 214

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G +            C   M   LG + H  ++K GF+ DV +  ++++FYGKCR    A
Sbjct: 215 GGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKA 274

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
             +F  +  + + + W  ++    +N   E A   +   + S  +     +   L  CA 
Sbjct: 275 RAVFDGMG-VRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAG 333

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +   H G+ +H   ++S +++N+ V + L+ MY +   +E A ++F      NL +WN+M
Sbjct: 334 LLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAM 393

Query: 469 ISSYTGLGYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSL 526
           I  Y  +G    A  +F+ M  S    P+ IT   +++     G  ++   L   M +  
Sbjct: 394 IGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERF 453

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
           G  P     + V+  +                 R G++                   + A
Sbjct: 454 GIEPRTEHYACVVDLLG----------------RAGME-------------------EQA 478

Query: 587 QEVFDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEE---EIKPDLVSWNSLVSG 642
            EV   M  R +I  W +L+ G C     ++ K  L ++  E   E+ P     + L+S 
Sbjct: 479 YEVIQGMPMRPSISVWGALL-GAC----KMHGKTELGRIAAEKLFELDPQDSGNHVLLSN 533

Query: 643 -YSIWGQSKEALVIIHHMKNSGIYPNV----VTWTSLI----SGSLQNENYRESL----K 689
            ++  G+  EA  I   MKN GI  +     VTW +++    +   ++E Y E      K
Sbjct: 534 MFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSK 593

Query: 690 FFIQMQQEDIKPNS 703
              QMQ     P++
Sbjct: 594 LRKQMQAAGYMPDT 607



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/422 (19%), Positives = 161/422 (38%), Gaps = 78/422 (18%)

Query: 415 GKQIHGYVLK-SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           G QIH   ++   L  +  V    + MY +  +L+LA  +F  M + N            
Sbjct: 137 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRN------------ 184

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                                  ++ WN +++     G     +    G++  G  PN  
Sbjct: 185 -----------------------VVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVV 221

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           S      A      L  G + HG++++ G + D+ V  S++D Y K  C   A+ VFD M
Sbjct: 222 SACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGM 281

Query: 594 KNRNIVAWNSLISGYCFKG-------LFVNAKKMLNQMEEEEIKPDLVSW---------- 636
             RN V+W S+++ Y   G        ++ A++   +  +  +   L +           
Sbjct: 282 GVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGR 341

Query: 637 ------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                             ++LV  Y   G  ++A  I +         N+VTW ++I G 
Sbjct: 342 ALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQR----NLVTWNAMIGGY 397

Query: 679 LQNENYRESLKFFIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIK 736
               + + +L  F  M +  +  PN  T+ +++ +C   GL ++G E+   +  + G   
Sbjct: 398 AHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEP 457

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
                  ++D+  ++G  + A EV +      +++ W  ++    ++G  +   +   +L
Sbjct: 458 RTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKL 517

Query: 796 LE 797
            E
Sbjct: 518 FE 519


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
            chloroplastic-like [Glycine max]
          Length = 903

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/853 (27%), Positives = 417/853 (48%), Gaps = 92/853 (10%)

Query: 256  RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
            R    W++ L  +        E L+++  + G G       L+  L+ C+ L  F  G +
Sbjct: 80   RDVVSWTTLLSAHTRNKHHF-EALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAK 138

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            +HAS++K G + +  L   L++ Y KC      +KL + V D  D + W  +I   +   
Sbjct: 139  IHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKD-GDVVSWTTMISSLVETS 197

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG-AFHEGKQIHGYVLKSALESNLSVC 434
            KW  A++L+ +M  +       T VK+L   + +G     GK +H  ++   +E NL + 
Sbjct: 198  KWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLK 257

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              +I MY++  ++E A +V      +                                  
Sbjct: 258  TAIICMYAKCRRMEDAIKVSQQTPKY---------------------------------- 283

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D+  W  ++SG   +   +  +  L  M+  G  PN  + + +L A + +  L+ G + 
Sbjct: 284  -DVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQF 342

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H  ++  GL+ D+YVG +L+DMY+K +    N  + F  +   N+++W SLI+G+   G 
Sbjct: 343  HSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGF 402

Query: 614  FVNAKKMLNQMEEEEIKP-----------------------------------DLVSWNS 638
               + ++  +M+   ++P                                   D+   N+
Sbjct: 403  EEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNA 462

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            LV  Y+  G + EA  +I  M     + +++T+T+L +   Q  ++  +L+    M  ++
Sbjct: 463  LVDAYAGGGMADEAWSVIGMMN----HRDIITYTTLAARLNQQGDHEMALRVITHMCNDE 518

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            +K +  +++S +    GLG+++ GK++HC   K+GF +   V+  L+  YSK G+++ A 
Sbjct: 519  VKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAY 578

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             VF+        SWN +I G A  G   +A+  F ++   G +PD++TF +L+ AC    
Sbjct: 579  RVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGS 638

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            L+ +G  YF SM   Y+I P ++HY C+VDLLG+ G L+EA   I TMPFKPD+ I+  L
Sbjct: 639  LLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTL 698

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            L +C +HG++   E  +RR  +L+PC+ A Y L+ +L   +   +  ++ R  M E G++
Sbjct: 699  LNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLR 758

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                  W+++   +++FSA         EI  +L  L++E+K  GY       YQ+ +++
Sbjct: 759  RSPRQCWMEVKSKIYLFSAR--EKIGNDEINEKLESLITEIKNRGY------PYQESEDK 810

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
                  L H+E+LA+ +G++   + APIR+ KN+ +C+ CH+    ++    REI +RD 
Sbjct: 811  ------LYHSEQLALAFGVLSVPTLAPIRINKNSLICTHCHSFIMLLTQFVDREIIVRDR 864

Query: 1059 ARFHHFREGECSC 1071
             RFH F++G+CSC
Sbjct: 865  KRFHVFKDGQCSC 877



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 152/647 (23%), Positives = 273/647 (42%), Gaps = 75/647 (11%)

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
           FR   L + L LC        G  VH+ +IK G   D++L   L+  Y KC  V  A  L
Sbjct: 16  FRETCLQV-LSLCNS-QTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHL 73

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+    D + W  ++    RN+    A++LF  M  S       T+   L++C+ +G 
Sbjct: 74  FDEMPH-RDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGE 132

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
           F  G +IH  V+K  LE N  +   L+ +Y++ +      ++   +KD ++ SW +MISS
Sbjct: 133 FEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISS 192

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                    A  L+ KM  + I P+  T+  LL                 GM S      
Sbjct: 193 LVETSKWSEALQLYVKMIEAGIYPNEFTFVKLL-----------------GMPSFLGLGK 235

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
           G                 YG+  H  ++  G++ +L + T+++ MY K   +++A +V  
Sbjct: 236 G-----------------YGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQ 278

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----W 646
                ++  W S+ISG+        A   L  ME   I P+  ++ SL++  S       
Sbjct: 279 QTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLEL 338

Query: 647 GQSKEALVII--------------------HHMKNSGI-------YPNVVTWTSLISGSL 679
           G+   + VI+                     H   +G+        PNV++WTSLI+G  
Sbjct: 339 GEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFA 398

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
           ++    ES++ F +MQ   ++PNS T+S++L  C  +  +   K++H   +K     D  
Sbjct: 399 EHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMA 458

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
           V   L+D Y+  G    A  V     ++ + ++  +       G+ + A+ +   +    
Sbjct: 459 VGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDE 518

Query: 800 FQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
            + D  +  + ++A    G++E G + +  S  + +    ++ +   +V    K G + +
Sbjct: 519 VKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSN--SLVHSYSKCGSMRD 576

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA--SRRLFKLEP 903
           A+   + +  +PD   W  L+     +G +  A  A    RL  ++P
Sbjct: 577 AYRVFKDIT-EPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKP 622


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Glycine max]
          Length = 758

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/718 (29%), Positives = 374/718 (52%), Gaps = 79/718 (11%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            V +LQ C    ++ E + +HG+V+K+    N  V + L+++Y++   +E A RVFD+M  
Sbjct: 71   VPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNM-- 128

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
                                             ++ +++ W  L+ G   +   ++ + +
Sbjct: 129  ---------------------------------LRRNVVAWTTLMVGFVQNSQPKHAIHV 155

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             + M   G  P+  ++S VL A + L+ LK G + H YI++  +D+D  VG++L  +Y K
Sbjct: 156  FQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSK 215

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
               L++A + F  ++ +N+++W S +S     G  V   ++  +M   +IKP+  +  S 
Sbjct: 216  CGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSA 275

Query: 640  VS---------------------GYSIWGQSKEALVII----------HHMKNSGIYPNV 668
            +S                     GY    + + +L+ +          H + N     ++
Sbjct: 276  LSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASM 335

Query: 669  VTWTSLISG-----SLQNENYR------ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            VTW ++I+G      L  +N        E+LK F ++    +KP+  T+SS+L  C  + 
Sbjct: 336  VTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRML 395

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             ++ G++IH   +K GF+ D  V+T LI MYSK G+++ A + F + + +T+ +W  MI 
Sbjct: 396  AIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMIT 455

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            GF+ +G  ++A+ +F ++   G +P+A+TF  +L+AC ++G+V +   YF+ M   Y I 
Sbjct: 456  GFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIK 515

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P ++HY CMVD+  + G L++A +FI+ M ++P   IW   +  C+ HG+LE    A+ +
Sbjct: 516  PAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQ 575

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L  L+P +   Y L++N+   + R+EDV R+R  M+E  V  +  WSWI I   V+ F  
Sbjct: 576  LLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKT 635

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGY--VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             G  HP +  I   L  L++++K +GY  +       ++ +EE+     + H+EKLAI +
Sbjct: 636  NGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHSEKLAITF 695

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            GL    + +PIRV+K+T +C D H   KY+S + GREI ++D  R H F  GECSC +
Sbjct: 696  GLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGECSCGN 753



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 140/603 (23%), Positives = 257/603 (42%), Gaps = 66/603 (10%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSS 263
           R  S  +  H  ++K G   + +  V S + + Y + G+   A + F     R+   W++
Sbjct: 81  RSYSETQIVHGHVMKTG--CHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTT 138

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +  +     + +  + V+ E+   G       L+ +L  C+ L +  LG + HA +IK 
Sbjct: 139 LMVGFVQ-NSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKY 197

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
             DFD  +  AL + Y KC  +E A K FS + + ++ + W   +     N      ++L
Sbjct: 198 HVDFDASVGSALCSLYSKCGRLEDALKTFSRIRE-KNVISWTSAVSACADNGAPVKGLRL 256

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F EM     K    T+   L  C ++ +   G Q++   +K   ESNL V N L+ +Y +
Sbjct: 257 FVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLK 316

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV-----------DVAWSLFNKMNSSR 492
           +  +  A R+F+ M D ++ +WN+MI+ +  +  +             A  LF+K+N S 
Sbjct: 317 SGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSG 376

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++PD+ T                                   +S VL   + +  ++ G 
Sbjct: 377 MKPDLFT-----------------------------------LSSVLSVCSRMLAIEQGE 401

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + H   ++ G   D+ V TSL+ MY K   ++ A + F  M  R ++AW S+I+G+   G
Sbjct: 402 QIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHG 461

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
           +   A  +   M    ++P+ V++  ++S  S  G   +AL     M K   I P +  +
Sbjct: 462 MSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHY 521

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG--KEIHCLC 729
             ++   ++     ++L F  +M  E   P+    S+ +  C   G L+ G       L 
Sbjct: 522 ECMVDMFVRLGRLEQALNFIKKMNYE---PSEFIWSNFIAGCKSHGNLELGFYAAEQLLS 578

Query: 730 LKNGFIKDAYVATGLIDMY---SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG--- 783
           LK    KD      L++MY    +  ++   R++  +     L  W+ + +   +Y    
Sbjct: 579 LKP---KDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKT 635

Query: 784 NGK 786
           NGK
Sbjct: 636 NGK 638



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/543 (21%), Positives = 245/543 (45%), Gaps = 63/543 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +L+ C    ++     VH  ++K G   +  +   L+N Y KC ++E A ++F  +    
Sbjct: 73  LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLR-R 131

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           + + W  +++  ++N + ++AI +F+EM ++ +     T+  +L AC+ + +   G Q H
Sbjct: 132 NVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFH 191

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            Y++K  ++ + SV + L S+YS+  +LE A + F  +++ N+ SW S +S+        
Sbjct: 192 AYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSA-------- 243

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
                                 C  +G    G     L L   M ++  +PN  +++  L
Sbjct: 244 ----------------------CADNGAPVKG-----LRLFVEMIAVDIKPNEFTLTSAL 276

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
               E+  L+ G + +   ++ G + +L V  SL+ +Y+K+ C+  A  +F+ M + ++V
Sbjct: 277 SQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMV 336

Query: 600 AWNSLISGY-------------CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
            WN++I+G+             C +G    A K+ +++    +KPDL + +S++S  S  
Sbjct: 337 TWNAMIAGHAQMMELTKDNLSACHRG--SEALKLFSKLNLSGMKPDLFTLSSVLSVCSRM 394

Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
              ++   I      +G   +V+  TSLIS   +  +   + K F++M    +   ++ +
Sbjct: 395 LAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMI 454

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           +   Q     G+ Q    I       G   +A    G++   S +G +  A   F     
Sbjct: 455 TGFSQH----GMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQK 510

Query: 767 K-----TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
           K      +  + CM+  F   G  ++A+    ++    ++P    ++  +A CK+ G +E
Sbjct: 511 KYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKM---NYEPSEFIWSNFIAGCKSHGNLE 567

Query: 822 EGW 824
            G+
Sbjct: 568 LGF 570


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/742 (30%), Positives = 374/742 (50%), Gaps = 97/742 (13%)

Query: 396  SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
            S      LQ C +      GK +H  +LK     +L   N L++MY +++ L  A+++FD
Sbjct: 38   SHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFD 97

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
             M + N  S+ ++I  Y                 S R                    +  
Sbjct: 98   EMPERNTISFVTLIQGYA---------------ESVR--------------------FLE 122

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
             + L   +   G   N    + +L+ +      + G   H  I + G + + +VGT+L+D
Sbjct: 123  AIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALID 182

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
             Y     +  A+EVFD +  +++V+W  +++ +     F  A K+ +QM     KP+  +
Sbjct: 183  AYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFT 242

Query: 636  WNSLVS----------GYSIWG---QSKEALVIIHHMKNSGIYP---------------- 666
            + S+            G S+ G   +S+  L +   +    +Y                 
Sbjct: 243  FASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIP 302

Query: 667  --NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
              +V+ W+ +I+   Q++  +E+++ F QM+Q  + PN  T +S+LQ C  +  L  G +
Sbjct: 303  KKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQ 362

Query: 725  IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
            IHC  +K G   D +V+  L+D+Y+K G ++++ E+F +S ++   +WN +I+G    G+
Sbjct: 363  IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGD 422

Query: 785  GKEAILLFHELLETGFQ-------------------------------PDAITFTALLAA 813
            G++A+ LF  +LE   Q                               PD +TF  +L+A
Sbjct: 423  GEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSA 482

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C N+GL+++G  YF SM  D+ I P IEHY+CMV LLG+ G+LD+A   I  +PF+P   
Sbjct: 483  CANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVM 542

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            +W ALLG+C IH  +E   I+++R+ ++EP + A + L+ N+ A + RW++V  +R +M 
Sbjct: 543  VWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMK 602

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
              GVK     SWI+    VH F+     HP    I   L  L  + KK GY+P+   V  
Sbjct: 603  RKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLL 662

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D+++EEK ++L  H+E+LA+ +G+++T S +PIR++KN R+C DCH A K +S V  REI
Sbjct: 663  DVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREI 722

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD  RFHHF+EG CSC D W
Sbjct: 723  VVRDINRFHHFQEGLCSCGDYW 744



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 142/621 (22%), Positives = 252/621 (40%), Gaps = 120/621 (19%)

Query: 208 SSVKSKHAQMIKMGKI-----WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
           S  K  H +++K G       WN       L+  Y++      A+K F     R+   + 
Sbjct: 55  SRGKGLHCEILKRGGCLDLFAWNI------LLNMYVKSDFLCDASKLFDEMPERNTISFV 108

Query: 263 SFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIK 322
           + ++ Y        E +E++  LH +G      + T ILKL        LG  +HA + K
Sbjct: 109 TLIQGYAE-SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFK 167

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
            G + +  +  AL++ Y  C  V+ A ++F  +   +D + W  ++     N+ ++ A+K
Sbjct: 168 LGHESNAFVGTALIDAYSVCGRVDVAREVFDGIL-YKDMVSWTGMVTCFAENDCFKEALK 226

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           LF +M+    K  + T   + +AC  + AF  GK +HG  LKS  E +L V   L+ +Y+
Sbjct: 227 LFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYT 286

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           ++  ++ A R F+ +   ++  W+ MI+ Y        A  +F +M  + + P+      
Sbjct: 287 KSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPN------ 340

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
                FT  S                         VLQA   +  L  G + H ++++ G
Sbjct: 341 ----QFTFAS-------------------------VLQACATMEGLNLGNQIHCHVIKIG 371

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           L  D++V  +LMD+Y K   ++N+ E+F    +RN V WN++I G+              
Sbjct: 372 LHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHV------------- 418

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
           Q+                      G  ++AL +  +M    +    VT++S    +L+  
Sbjct: 419 QL----------------------GDGEKALRLFLNMLEYRVQATEVTYSS----ALRAC 452

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
               +L+  +Q+    +KP+  T   +L  C   GLL  G+              AY  +
Sbjct: 453 ASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQ--------------AYFTS 498

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            + D                      +  + CM+      G+  +A+ L  E+    FQP
Sbjct: 499 MIQD----------------HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQP 539

Query: 803 DAITFTALLAACKNSGLVEEG 823
             + + ALL AC     +E G
Sbjct: 540 SVMVWRALLGACVIHNDIELG 560



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 56/123 (45%)

Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
           NS   ++ LQ C        GK +HC  LK G   D +    L++MY KS  L  A ++F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
            +   +   S+  +I G+A      EAI LF  L   G + +   FT +L    ++   E
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGE 156

Query: 822 EGW 824
            GW
Sbjct: 157 LGW 159


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/585 (34%), Positives = 315/585 (53%), Gaps = 46/585 (7%)

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL--YVGTSLMDMYVKNDCLQNAQ 587
            PN  S++ ++++    +  + GR +H  I++  LD  L  ++   L++MY K D   +AQ
Sbjct: 6    PN--SLASLVESAVSTQCSRLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQ 62

Query: 588  EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP---------------- 631
             +     NR++V W +LI+G    G F +A    + M  + I+P                
Sbjct: 63   LLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLR 122

Query: 632  -------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
                               D+    S    YS  G ++EA  +   M       N+ TW 
Sbjct: 123  SPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPER----NIATWN 178

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            + +S S+    Y ++L  FI+ ++E I+P    +SS+L  C GL +L+ GK +H L +K 
Sbjct: 179  AYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKA 238

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
              + + +V + L+DMY K G+++ A   F +   + L +WN MI G+A  G    A+ LF
Sbjct: 239  CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLF 298

Query: 793  HELL--ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
             E+        P+ +TF  +L+AC  +G V  G + F+SM   Y I P  EHY+C+VDLL
Sbjct: 299  DEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLL 358

Query: 851  GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
            G+AG +++A+ FI+ MP +P  ++WGALLG+ ++ G  E  ++A+  LF+L+P +S N+ 
Sbjct: 359  GRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHV 418

Query: 911  LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
            L+ N+ A + RWE+   +R  M +VG+K     SWI     VHVF A+   H    EI  
Sbjct: 419  LLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQA 478

Query: 971  ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
             L  L  EM+  GY+PDT     D++EEEK   +  H+EK+A+ +GL+   +  PIR+ K
Sbjct: 479  MLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITK 538

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N R+C DCH+A K++S + GREI +RD   FH FR+ +CSC D W
Sbjct: 539  NLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 174/419 (41%), Gaps = 49/419 (11%)

Query: 312 LGVEVHASLIKRGFDFDVHLKC----ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
           LG   HA +IK     D  L       L+N Y K     SA  L S ++     + W  +
Sbjct: 24  LGRAAHAQIIK---TLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS-LTPNRSVVTWTAL 79

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I   ++N ++ +A+  F  M+  S +    T     +A   + +   GKQ+H   +K+  
Sbjct: 80  IAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQ 139

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            S++ V      MYS+    E A ++FD M + N                          
Sbjct: 140 ISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERN-------------------------- 173

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
                    I TWN  LS     G Y + LT     +  G  P    VS VL A   L +
Sbjct: 174 ---------IATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSV 224

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L+ G+  H   ++  +  +++VG++L+DMY K   +++A+  FD M  RN+V WN++I G
Sbjct: 225 LEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGG 284

Query: 608 YCFKGLFVNAKKMLNQME--EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GI 664
           Y  +G    A  + ++M      + P+ V++  ++S  S  G     + I   M+   GI
Sbjct: 285 YAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGI 344

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
            P    +  ++    +     ++ +F  +M    I+P  +   +LL      G  + GK
Sbjct: 345 EPGAEHYACVVDLLGRAGMVEQAYQFIKKMP---IRPTVSVWGALLGASKMFGKSELGK 400



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 15/344 (4%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYL-----EFGDFTSAAKAFFLYFSRSYA 259
           +C    ++ HAQ+IK       D+ + S I+++L     +     SA     L  +RS  
Sbjct: 20  QCSRLGRAAHAQIIK-----TLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVV 74

Query: 260 DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHAS 319
            W++ +      G     L   +  +    +           K    L +  +G +VHA 
Sbjct: 75  TWTALIAGSVQNGRFTSALFH-FSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHAL 133

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            +K G   DV + C+  + Y K    E A K+F E+ +  +   WN  +   +   ++++
Sbjct: 134 AVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPE-RNIATWNAYLSNSVLEGRYDD 192

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A+  F E +    +     +  +L ACA +     GK +H   +K+ +  N+ V + L+ 
Sbjct: 193 ALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVD 252

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN--SSRIQPDI 497
           MY +   +E A R FD M + NL +WN+MI  Y   G  D+A +LF++M   S R+ P+ 
Sbjct: 253 MYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNY 312

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQ 540
           +T+ C+LS     GS    + +   M+   G  P     + V+ 
Sbjct: 313 VTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVD 356



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 11/212 (5%)

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSA 757
           + PNS  ++SL+++       + G+  H   +K       +++   L++MYSK     SA
Sbjct: 4   LSPNS--LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
           + +   + N+++ +W  +I G    G    A+  F  +     QP+  TF     A K S
Sbjct: 62  QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFP---CAFKAS 118

Query: 818 GLVEEGW--KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
           G +      K   +++     I  +       D+  KAG  +EA      MP +  AT W
Sbjct: 119 GSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIAT-W 177

Query: 876 GALLGSCRIHGHLEYAEIA--SRRLFKLEPCN 905
            A L +  + G  + A  A    R   +EP +
Sbjct: 178 NAYLSNSVLEGRYDDALTAFIEARKEGIEPTD 209


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/722 (30%), Positives = 364/722 (50%), Gaps = 87/722 (12%)

Query: 398  TIVKMLQACAKVGAFHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDS 456
            T   +L+ CA++GA  EG+  H   ++  +  +++   N L++ Y+R   ++ A RVFD 
Sbjct: 110  TFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDG 169

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M   ++ +WNSM+  Y   G   +A   F +M+                           
Sbjct: 170  MPARDVVTWNSMVDGYVSNGLGTLALVCFREMH--------------------------- 202

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
                   ++L  + +G  +   L A      L  GRE H Y++R+G+++D+ VGTS++DM
Sbjct: 203  -------EALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDM 255

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK-------GLFVNAKKMLNQME---- 625
            Y K   + +A+ VF  M +R +V WN +I GY            FV  K   +Q+E    
Sbjct: 256  YCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTA 315

Query: 626  ------------------------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN 661
                                      +  P +V   +L+  YS  G+ K +  +   M  
Sbjct: 316  INLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTT 375

Query: 662  SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                  +V+W ++I+  +  E Y E++  F+ +  + + P+  TMS+++     LGLL+ 
Sbjct: 376  K----TLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQ 431

Query: 722  GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
             +++H   ++ G+ ++  +   ++ MY++ G++ S+RE+F K A K + SWN MIMG+AI
Sbjct: 432  CRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAI 491

Query: 782  YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIE 841
            +G G+ A+ +F E+   G +P+  TF ++L AC  SGL +EGW  F+SM  DY +IP IE
Sbjct: 492  HGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIE 551

Query: 842  HYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKL 901
            HY CM DLLG+AG L E   FI  MP  P   +WG+LL + R    ++ AE A+ R+F+L
Sbjct: 552  HYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQL 611

Query: 902  EP-----CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
            E       N+  Y L+ ++ A + RW+DVER++  M+E G++     S +++  I   F 
Sbjct: 612  EQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGLRRTDPRSIVELHGISCSFV 671

Query: 957  AEGAPHPATG---EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
                 HP +    E+   L   + EM+     P  +     +D     +    H+ +LA+
Sbjct: 672  NGDTTHPQSKMIQEVSNFLSGKIGEMRD----PMNQSDPTSLDSRRTTEP-NKHSVRLAV 726

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            V+GL+ T++R PI V KN R+C+DCH A K +S   GR I + D   +H F +G C C D
Sbjct: 727  VFGLISTEARTPILVKKNVRICNDCHHALKLISKYSGRRIVVGDTNIYHQFSDGSCCCGD 786

Query: 1074 CW 1075
             W
Sbjct: 787  YW 788



 Score =  143 bits (360), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/513 (20%), Positives = 216/513 (42%), Gaps = 71/513 (13%)

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           ++LK C +L A   G   H++ I+ G    DV+   +L+ FY +   V+ A ++F  +  
Sbjct: 113 VVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMP- 171

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGK 416
             D + WN ++   + N     A+  FREM  +   +     I+  L AC    A  +G+
Sbjct: 172 ARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGR 231

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           ++H YV++  +E ++ V   ++ MY +   +  A  VF +M                   
Sbjct: 232 EVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRT--------------- 276

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                               ++TWNC++ G+  +   +        M++ G +    +  
Sbjct: 277 --------------------VVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAI 316

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +L A  +     YGR  HGYI R      + + T+L++MY K   ++++++VF  M  +
Sbjct: 317 NLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTK 376

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL--- 653
            +V+WN++I+ Y +K +++ A  +   +  + + PD  + +++V  + + G  ++     
Sbjct: 377 TLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMH 436

Query: 654 ----------------VIIHHMKNSG------------IYPNVVTWTSLISGSLQNENYR 685
                            I+H     G               +V++W ++I G   +   R
Sbjct: 437 SYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGR 496

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGL 744
            +L+ F +M+   ++PN +T  S+L  C   GL   G  + + +    G I        +
Sbjct: 497 SALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCM 556

Query: 745 IDMYSKSGNLKSAREVFRK-SANKTLASWNCMI 776
            D+  ++G+LK   +       + T   W  ++
Sbjct: 557 TDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLL 589



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 150/327 (45%), Gaps = 33/327 (10%)

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQ 587
           RP+  +  VVL+    L  L  GR +H   +R G+   D+Y G SL+  Y +   + +A+
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSI- 645
            VFD M  R++V WNS++ GY   GL   A     +M E  E++ D V   + ++   + 
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224

Query: 646 ----WGQSKEALVIIHHMKNS---------------------GIYPN-----VVTWTSLI 675
                G+   A VI H M++                      G++       VVTW  +I
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            G   NE   E+   F+QM+ E  +    T  +LL  C        G+ +H    +  F+
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
               + T L++MYSK G +KS+ +VF +   KTL SWN MI  +       EAI LF +L
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404

Query: 796 LETGFQPDAITFTALLAACKNSGLVEE 822
           L     PD  T +A++ A    GL+ +
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQ 431



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 149/325 (45%), Gaps = 11/325 (3%)

Query: 206 CLSSV----KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADW 261
           CL S     +  HA +I+ G + +   +  S++  Y + GD  SA   F    SR+   W
Sbjct: 222 CLESALMQGREVHAYVIRHG-MEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTW 280

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHAS 319
           +  +  Y +     +E  + + ++  +G   +  ++T I  L  C +  +   G  VH  
Sbjct: 281 NCMIGGY-ALNERPEEAFDCFVQMKAEG--HQVEVVTAINLLAACAQTESSLYGRSVHGY 337

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           + +R F   V L+ AL+  Y K   V+S+ K+F +++  +  + WN +I   +  E +  
Sbjct: 338 ITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMT-TKTLVSWNNMIAAYMYKEMYME 396

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           AI LF ++          T+  ++ A   +G   + +Q+H Y+++     N  + N ++ 
Sbjct: 397 AITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMH 456

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY+R   +  +  +FD M   ++ SWN+MI  Y   G    A  +F++M  + ++P+  T
Sbjct: 457 MYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNEST 516

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQ 524
           +  +L+     G      T    MQ
Sbjct: 517 FVSVLTACSVSGLTDEGWTQFNSMQ 541


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
            [Vitis vinifera]
          Length = 781

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/793 (29%), Positives = 387/793 (48%), Gaps = 71/793 (8%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            + HA +I  G   D+     L +     + ++ A+ LFS + +  D  L+N +I     N
Sbjct: 28   QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPN-PDLFLYNVLIRAFSLN 86

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
                +A+ L+  ++ S+           + + A           H  V  +   S+L V 
Sbjct: 87   NSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIV--AGFGSDLFVG 144

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            + +++ Y + +++  A +VFD M                                   ++
Sbjct: 145  SAIVACYFKFSRVAAARKVFDGM-----------------------------------LE 169

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D + WN ++SG   +  +   + +   M   G   + ++V+ VL  V EL+ L  G   
Sbjct: 170  RDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGI 229

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC----- 609
                ++ G     YV T L  +Y K   ++ A+ +F  +   ++V++N++ISGY      
Sbjct: 230  QCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNET 289

Query: 610  ------FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG-----------QSKEA 652
                  FK L V+ +K +N      + P    +  L     I G               A
Sbjct: 290  ESSVRLFKELLVSGEK-VNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTA 348

Query: 653  LVIIHHMKNS----------GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
            L  ++   N               ++ +W ++ISG  QN    +++  F +MQ+ +++PN
Sbjct: 349  LTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPN 408

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              T++S+L  C  LG L  GK +H L  +  F  + +V+T LIDMY+K G++  A+ +F 
Sbjct: 409  PVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFS 468

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
                K   +WN MI G+ ++G G EA+ LF+E+L +   P  +TF ++L AC ++GLV E
Sbjct: 469  MMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVRE 528

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G + F SM  D+   P  EHY+CMVDLLG+AG LD+A DFIR MP +P   +WGALLG+C
Sbjct: 529  GDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGAC 588

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
             IH     A +AS +LF+L+P N   Y L+ N+ +    + +   +R  +    +     
Sbjct: 589  MIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPG 648

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             + I++   +H+F++    HP    IY  L  L  +M++ G+  +T     D++EEEK  
Sbjct: 649  CTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKEL 708

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            ++  H+EKLAI +GL+ ++    IR+IKN RVC DCH A K++S +  R I +RD  RFH
Sbjct: 709  MVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFH 768

Query: 1063 HFREGECSCNDCW 1075
            HF++G CSC D W
Sbjct: 769  HFKDGICSCGDYW 781



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 221/492 (44%), Gaps = 42/492 (8%)

Query: 224 WNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW 282
           + SD  V S I   Y +F    +A K F     R    W++ +           E + ++
Sbjct: 137 FGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVK-NSCFDEAILIF 195

Query: 283 GELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
           G++   G+ F S  +  +L    +L    LG+ +    +K GF    ++   L   Y KC
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255

Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
            ++E+A  LF ++    D + +N +I     N + E++++LF+E+  S  K  S +IV +
Sbjct: 256 GEIETARLLFGQIGQ-PDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGL 314

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           +      G  H  + IHG+  KS + SN SV   L ++YSR N++E A  +FD   + +L
Sbjct: 315 IPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSL 374

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
           +SWN+MIS Y   G  + A SLF +M    ++P+ +T                       
Sbjct: 375 ASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVT----------------------- 411

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                       V+ +L A  +L  L  G+  H  I R   + +++V T+L+DMY K   
Sbjct: 412 ------------VTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGS 459

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           +  AQ +F  M  +N V WN++ISGY   G    A  + N+M    + P  V++ S++  
Sbjct: 460 ITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYA 519

Query: 643 YSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            S  G  +E   I   M  + G  P    +  ++    +  N  ++L F  +M    ++P
Sbjct: 520 CSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMP---VEP 576

Query: 702 NSTTMSSLLQTC 713
                 +LL  C
Sbjct: 577 GPPVWGALLGAC 588



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 141/313 (45%), Gaps = 29/313 (9%)

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
           +R   S+ ++ L  +  +  L    ++H  I+ NGL  DL   T L         +  A 
Sbjct: 3   YRGIASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQAS 62

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSW---------- 636
            +F  + N ++  +N LI  +       +A  +   + +   ++PD  ++          
Sbjct: 63  LLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSL 122

Query: 637 --------NSLVSGYSIWGQSKEALVIIH----------HMKNSGIYPNVVTWTSLISGS 678
                   +S+V+G+        A+V  +           + +  +  + V W +++SG 
Sbjct: 123 GLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGL 182

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
           ++N  + E++  F  M +  I  +STT++++L     L  L  G  I CL +K GF   A
Sbjct: 183 VKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHA 242

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
           YV TGL  +YSK G +++AR +F +     L S+N MI G+      + ++ LF ELL +
Sbjct: 243 YVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVS 302

Query: 799 GFQPDAITFTALL 811
           G + ++ +   L+
Sbjct: 303 GEKVNSSSIVGLI 315


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 970

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 278/963 (28%), Positives = 448/963 (46%), Gaps = 146/963 (15%)

Query: 229  MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
            +  +LI  YLE GD  SA K F     R+   W+  +  Y S  GE +E L    ++  +
Sbjct: 38   LCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGY-SRNGEHKEALVFLRDMVKE 96

Query: 289  GVIFRSRILTIILKLCTKL--MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR-DV 345
            GV          L+ C +L  +    G ++H  L K  +  D  +   L++ Y KC   +
Sbjct: 97   GVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSL 156

Query: 346  ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ- 404
              A + F +V  +++ + WN II V  +      A K+F  MQ   ++    T   ++  
Sbjct: 157  GYALRAFDDVQ-VKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTT 215

Query: 405  ACAKVGA-FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL---------------- 447
            AC+         +QI   + KS   ++L V + L+S ++++  L                
Sbjct: 216  ACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAV 275

Query: 448  ---------------ELATRVF---DSMKDHNLSSWNSMISSY--------TGL------ 475
                           E AT++F   +SM D +  S+  ++SS+         GL      
Sbjct: 276  TLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335

Query: 476  -------GYVDVAWSLFNKM-----------NSSRI-----QPDIITWNCLLSGHFTHGS 512
                   G VD    + N +           ++ R+     + D ++WN +++G   +  
Sbjct: 336  HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSC 395

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            +   +   + M+     P   ++   + +   L+  K G++ HG  L+ G+D ++ V  +
Sbjct: 396  FIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNA 455

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY------------CFKGLFVNAKKM 620
            LM +Y +  CL   +++F +M   + V+WNS+I               CF    + A + 
Sbjct: 456  LMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNA-LRAGQK 514

Query: 621  LNQME-------------------------EEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            LN++                          +  I  +  + N+L++ Y   G+      I
Sbjct: 515  LNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKI 574

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
               M       + VTW S+ISG + NE   ++L     M Q   + +S   +++L     
Sbjct: 575  FSRMSER---RDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFAS 631

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            +  L+ G E+H   ++     D  V + L+DMYSK G L  A   F           N M
Sbjct: 632  VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF-----------NTM 680

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
                 ++ N K         L+    PD +TF  +L+AC ++GL+EEG+K+F+SMS  Y 
Sbjct: 681  ----PLFANMK---------LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 727

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS-CRIHGH-LEYAEI 893
            + P IEH+SCM DLLG+AG LD+  DFI  MP KP+  IW  +LG+ CR +G   E  + 
Sbjct: 728  LAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 787

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            A+  LF+LEP N+ NY L+ N+ A   RWED+ + R  M +  VK    +SW+ +   VH
Sbjct: 788  AAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 847

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
            +F A    HP    IY +L  L  +M+  GYVP T     D+++E K ++L  H+EKLA+
Sbjct: 848  MFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAV 907

Query: 1014 VYGLMKTKSRA-PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
             + L   +S   PIR++KN RVC DCH+A K++S + GR+I LRD  RFHHF++GECSC+
Sbjct: 908  AFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCS 967

Query: 1073 DCW 1075
            D W
Sbjct: 968  DFW 970



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 160/617 (25%), Positives = 268/617 (43%), Gaps = 86/617 (13%)

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H+ L K G + DV+L   L+N Y +  D  SA K+F E+  L + + W  ++    RN +
Sbjct: 24  HSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMP-LRNCVSWACVVSGYSRNGE 82

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAK---VGAFHEGKQIHGYVLKSALESNLSV 433
            + A+   R+M      +     V  L+AC +   VG    G+QIHG + K +   +  V
Sbjct: 83  HKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILF-GRQIHGLLFKLSYAVDAVV 141

Query: 434 CNCLISMYSR-NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            N LISMY +    L  A R FD ++  N  SWNS+IS Y+  G    A+ +F  M    
Sbjct: 142 SNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDG 201

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            +P   T+  L++                              +       ++RLL+   
Sbjct: 202 SRPTEYTFGSLVT------------------------------TACSLTEPDVRLLE--- 228

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK- 611
           +    I ++G   DL+VG+ L+  + K+  L +A+++F+ M+ RN V  N L+ G   + 
Sbjct: 229 QIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQK 288

Query: 612 ------GLFVNAKKMLNQMEE---------------EE-------------IKPDLVSW- 636
                  LF++   M++   E               EE             I   LV + 
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348

Query: 637 ----NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
               N LV+ Y+  G   +A  +   M       + V+W S+I+G  QN  + E+++ + 
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFCFMTE----KDSVSWNSMITGLDQNSCFIEAVERYQ 404

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
            M++ +I P S T+ S + +C  L   + G++IH   LK G   +  V+  L+ +Y+++G
Sbjct: 405 SMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNG-KEAILLFHELLETGFQPDAITFTALL 811
            L   R++F         SWN +I   A       EA+  F   L  G + + ITF+++L
Sbjct: 465 CLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVL 524

Query: 812 AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
           +A  +    E G K    ++  YNI       + ++   GK G +D        M  + D
Sbjct: 525 SAVSSLSFGELG-KQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRD 583

Query: 872 ATIWGALLGSCRIHGHL 888
              W +++ S  IH  L
Sbjct: 584 DVTWNSMI-SGYIHNEL 599



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 126/531 (23%), Positives = 208/531 (39%), Gaps = 96/531 (18%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           +  +Q+C  +G     K  H  + K+ LE ++ +CN LI+ Y        A +VFD M  
Sbjct: 7   LSFVQSC--IGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
            N  SW                                    C++SG+  +G ++  L  
Sbjct: 65  RNCVSW-----------------------------------ACVVSGYSRNGEHKEALVF 89

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLK--YGRESHGYILRNGLDYDLYVGTSLMDMY 577
           LR M   G   N  +    L+A  EL  +   +GR+ HG + +     D  V   L+ MY
Sbjct: 90  LRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMY 149

Query: 578 VK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP----- 631
            K    L  A   FD+++ +N V+WNS+IS Y   G    A KM   M+ +  +P     
Sbjct: 150 WKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTF 209

Query: 632 --------------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHM 659
                                           DL   + LVS ++  G    A  I + M
Sbjct: 210 GSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQM 269

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTM-------SSLLQ 711
           +      N VT   L+ G ++ +   E+ K F+ M    D+ P S  +        SL +
Sbjct: 270 ETR----NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAE 325

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
             G    L+ G+E+H   +  G +     +  GL++MY+K G++  AR VF     K   
Sbjct: 326 EVG----LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSV 381

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
           SWN MI G        EA+  +  +      P + T  + +++C +    + G +     
Sbjct: 382 SWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLG-QQIHGE 440

Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
           S    I   +   + ++ L  + G L+E      +MP + D   W +++G+
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMP-EHDQVSWNSIIGA 490



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 199/504 (39%), Gaps = 69/504 (13%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H  +I  G +     +   L+  Y + G    A + F     +    W+S +   +    
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSC 395

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
            + E +E +  +    ++  S  L   +  C  L    LG ++H   +K G D +V +  
Sbjct: 396 FI-EAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK-WENAIKLFREMQFSSA 392
           ALM  Y +   +    K+FS + +  D + WN II     +E+    A+  F      + 
Sbjct: 455 ALMTLYAETGCLNECRKIFSSMPE-HDQVSWNSIIGALASSERSLPEAVACFLN-ALRAG 512

Query: 393 KAISRTIVKMLQACAKVGAFHE-GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
           + ++R     + +     +F E GKQIHG  LK  +    +  N LI+ Y +  +++   
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCE 572

Query: 452 RVFDSMKD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           ++F  M +  +  +WNSMIS Y                    I  +++            
Sbjct: 573 KIFSRMSERRDDVTWNSMISGY--------------------IHNELLA----------- 601

Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
                 L L+  M   G R +    + VL A   +  L+ G E H   +R  L+ D+ VG
Sbjct: 602 ----KALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           ++L+DMY K   L  A   F+ M                   LF N K       + +  
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMP------------------LFANMKL------DGQTP 693

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLK 689
           PD V++  ++S  S  G  +E       M +S G+ P +  + S ++  L      + L+
Sbjct: 694 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF-SCMADLLGRAGELDKLE 752

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTC 713
            FI  ++  +KPN     ++L  C
Sbjct: 753 DFI--EKMPMKPNVLIWRTVLGAC 774


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
          Length = 809

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/725 (31%), Positives = 363/725 (50%), Gaps = 67/725 (9%)

Query: 362  LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
             +WN +I   ++      A  L++ M  +   A + T   ++QAC+   +  E KQ+H +
Sbjct: 44   FMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNH 103

Query: 422  VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            VLK   +S++ V N LI+ +S  + +  A RVF+     +  SWNS+++ Y  +G V+ A
Sbjct: 104  VLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEA 163

Query: 482  WSLFNKMNSSRI---------------------------QPDIITWNCLLSGHFTHGSYQ 514
              ++++M    I                           + D++TW+ L++    +  Y+
Sbjct: 164  KHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYE 223

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
              +    GM  +G   +       L A   L ++  G+  H   L+ G +  + +  +L+
Sbjct: 224  EAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALI 283

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
             MY K   +  A+++FD                                   E    DL+
Sbjct: 284  YMYSKCGDIMVARKLFD-----------------------------------EAYLLDLI 308

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
            SWNS++SGY        A  I   M       +VV+W+S+ISG  QN+ + E+L  F +M
Sbjct: 309  SWNSMISGYLKCNLVDNAKAIFDSMPEK----DVVSWSSMISGYAQNDLFDETLALFQEM 364

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
            Q    KP+ TT+ S++  C  L  L+ GK +H    +NG   +  + T LIDMY K G +
Sbjct: 365  QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCV 424

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            ++A EVF     K +++WN +I+G A+ G  + ++ +F  + +    P+ ITF  +L AC
Sbjct: 425  ETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGAC 484

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
            ++ GLV+EG  +F SM  D+ I P ++HY CMVDLLG+AG L EA + +  MP  PD   
Sbjct: 485  RHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVAT 544

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            WGALLG+C+ HG  E      R+L +L+P +   + L+ N+ A   +W+DV  +R  M +
Sbjct: 545  WGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTK 604

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
              V  +   S I+ + ++H F A    HP    I   L  +  ++K  GY PD   V  D
Sbjct: 605  HRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLD 664

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI- 1053
            +DEEEK   L  H+EKLAI +GL+      PIR++KN R+C+DCHTAAK +S    R+I 
Sbjct: 665  VDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724

Query: 1054 FLRDG 1058
            FL  G
Sbjct: 725  FLFRG 729



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 202/397 (50%), Gaps = 17/397 (4%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSA 392
           +++  +G    V  A KLF E+  LE D++ W+ +I    +NE +E AI+ F  M     
Sbjct: 180 SMIVLFGMRGLVVEACKLFDEM--LEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 237

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
                  V  L ACA +   + GK IH   LK   ES +++ N LI MYS+   + +A +
Sbjct: 238 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 297

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +FD     +L SWNSMIS Y     VD A ++F+ M     + D+++W+ ++SG+  +  
Sbjct: 298 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP----EKDVVSWSSMISGYAQNDL 353

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
           +   L L + MQ  GF+P+ +++  V+ A   L  L+ G+  H YI RNGL  ++ +GT+
Sbjct: 354 FDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTT 413

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+DMY+K  C++ A EVF  M  + I  WN+LI G    GL  ++  M + M++  + P+
Sbjct: 414 LIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPN 473

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHH----MKNSGIYPNVVTWTSLISGSLQNENYRESL 688
            +++  ++      G   E     HH    + +  I PNV  +  ++    +    +E+ 
Sbjct: 474 EITFMGVLGACRHMGLVDEGQ---HHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAE 530

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           +   +M    + P+  T  +LL  C   G  + G+ +
Sbjct: 531 ELLNRMP---MTPDVATWGALLGACKKHGDSEMGRRV 564



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 134/556 (24%), Positives = 237/556 (42%), Gaps = 117/556 (21%)

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++   R+F+ +++ N   WN MI +Y        A++L+  M S+ +  D  T+      
Sbjct: 28  IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTY------ 81

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                                         +++QA +  R     ++ H ++L+ G D D
Sbjct: 82  -----------------------------PLLIQACSIRRSEWEAKQVHNHVLKLGFDSD 112

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           +YV  +L++ +     + +A  VF+     + V+WNS+++GY   G    AK + +QM E
Sbjct: 113 VYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPE 172

Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
             I    ++ NS++  + + G   EA  +   M    +  ++VTW++LI+   QNE Y E
Sbjct: 173 RSI----IASNSMIVLFGMRGLVVEACKLFDEM----LEKDMVTWSALIACFQQNEMYEE 224

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           +++ F+ M +  +  +     S L  C  L ++  GK IH L LK G      +   LI 
Sbjct: 225 AIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIY 284

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA---IYGNGK----------------- 786
           MYSK G++  AR++F ++    L SWN MI G+    +  N K                 
Sbjct: 285 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 344

Query: 787 -----------EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-W--KYFDSMST 832
                      E + LF E+  +GF+PD  T  ++++AC     +E+G W   Y      
Sbjct: 345 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 404

Query: 833 DYNII----------------PTIEHYSCMVD---------LLGKA--GYLDEAWDFIRT 865
             N+I                  +E +  M++         +LG A  G ++ + D    
Sbjct: 405 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 464

Query: 866 MP---FKPDATIWGALLGSCRIHG------HLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
           M      P+   +  +LG+CR  G      H  Y+ I      K++P N  +Y  M++LL
Sbjct: 465 MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDH---KIQP-NVKHYGCMVDLL 520

Query: 917 AMSNRWEDVERLRHSM 932
             + + ++ E L + M
Sbjct: 521 GRAGKLQEAEELLNRM 536



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 31/305 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S+I  +   G    A K F     +    WS+ +  ++      +E +  +  +H  GV+
Sbjct: 180 SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQ-NEMYEEAIRTFVGMHKIGVM 238

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
               +    L  C  L+   +G  +H+  +K G +  ++L+ AL+  Y KC D+  A KL
Sbjct: 239 VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKL 298

Query: 352 FSEVSDLE------------------------------DDLLWNEIIMVKLRNEKWENAI 381
           F E   L+                              D + W+ +I    +N+ ++  +
Sbjct: 299 FDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETL 358

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            LF+EMQ S  K    T+V ++ ACA++ A  +GK +H Y+ ++ L  N+ +   LI MY
Sbjct: 359 ALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY 418

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
            +   +E A  VF  M +  +S+WN++I      G V+ +  +F+ M    + P+ IT+ 
Sbjct: 419 MKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFM 478

Query: 502 CLLSG 506
            +L  
Sbjct: 479 GVLGA 483


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/596 (34%), Positives = 309/596 (51%), Gaps = 75/596 (12%)

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVL 539
            A  +FN++ +    P+I TWN ++ G     +    + L   M +     P+  +   + 
Sbjct: 88   AAQIFNQIQA----PNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLF 143

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            +AV +L  +  G   H  ++RNG D   +V  SL+ MY     L +A +VF+ M  R   
Sbjct: 144  KAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYR--- 200

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
                                            D V+WNS+++G+++ G   EAL +   M
Sbjct: 201  --------------------------------DRVAWNSVINGFALNGMPNEALTLYREM 228

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
             + G+ P                                   +  TM SLL  C  LG L
Sbjct: 229  GSEGVEP-----------------------------------DGFTMVSLLSACVELGAL 253

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
              G+ +H   +K G +++ + +  L+D+YSK GN + A++VF +   +++ SW  +I+G 
Sbjct: 254  ALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGL 313

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A+ G G EA+ LF EL   G +P  ITF  +L AC + G+++EG+ YF  M  +Y I+P 
Sbjct: 314  AVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPR 373

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            IEH+ CMVDLL +AG + +A+D+IR MP  P+A IW  LLG+C IHGHLE  E+A   + 
Sbjct: 374  IEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQ 433

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +LE  +S ++ L+ NL A   RW DV+ +R  M   GVK    +S +++   V+ F    
Sbjct: 434  RLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGD 493

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP + E Y  L  +   +K  GYVP T  V  DI+EEEK   L  HTEK+AI + L+ 
Sbjct: 494  RSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVN 553

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            T    PIR++KN RVC+DCH A K +S V  REI +RD +RFHHF++G CSC D W
Sbjct: 554  TPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 193/439 (43%), Gaps = 54/439 (12%)

Query: 297 LTIILKLCTKLMAFWLGVE-----VHASLIKRGF-----DFDVHLKCALMNFYGKCRDVE 346
           L+ IL+ C  L+      +     +HA  I+ G      DF+ HL  AL++       + 
Sbjct: 30  LSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MS 86

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF-SSAKAISRTIVKMLQA 405
            A ++F+++    +   WN +I     +E    A++LF +M   SS    + T   + +A
Sbjct: 87  FAAQIFNQI-QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKA 145

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            AK+     G+ IH  V+++  +S   V N L+ MYS                       
Sbjct: 146 VAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSV---------------------- 183

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
                    LG +  A+ +F  M+      D + WN +++G   +G     LTL R M S
Sbjct: 184 ---------LGSLXSAYQVFEIMSYR----DRVAWNSVINGFALNGMPNEALTLYREMGS 230

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            G  P+G ++  +L A  EL  L  G   H Y+++ GL  + +   +L+D+Y K    ++
Sbjct: 231 EGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRD 290

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           AQ+VFD M+ R++V+W SLI G    GL   A K+  ++E + +KP  +++  ++   S 
Sbjct: 291 AQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSH 350

Query: 646 WGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            G   E       MK   GI P +     ++    +     ++  +   M    + PN+ 
Sbjct: 351 CGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNM---PVPPNAV 407

Query: 705 TMSSLLQTCGGLGLLQNGK 723
              +LL  C   G L+ G+
Sbjct: 408 IWRTLLGACTIHGHLELGE 426



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 12/256 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y   G   SA + F +   R    W+S +  + +  G   E L ++ E+  +GV 
Sbjct: 176 SLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGF-ALNGMPNEALTLYREMGSEGVE 234

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C +L A  LG  VH  ++K G   + H   AL++ Y KC +   A K+
Sbjct: 235 PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKV 294

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+ +    + W  +I+    N     A+KLF E++    K    T V +L AC+  G 
Sbjct: 295 FDEMEE-RSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGM 353

Query: 412 FHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSW 465
             EG     +    Y +   +E +     C++ +  R  K+  A     +M    N   W
Sbjct: 354 LDEGFNYFRRMKEEYGILPRIEHH----GCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIW 409

Query: 466 NSMISSYTGLGYVDVA 481
            +++ + T  G++++ 
Sbjct: 410 RTLLGACTIHGHLELG 425



 Score = 46.2 bits (108), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 107/274 (39%), Gaps = 42/274 (15%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKD--AYVATGLIDMYSKSGNLKSAREVFRKSA 765
           SL+Q CG        K+IH   +++G       +    +  + S S  +  A ++F +  
Sbjct: 39  SLVQLCGSSQ--SKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQ 96

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHEL-LETGFQPDAITFTALLAACK--------- 815
              + +WN MI GFA   N   A+ LF ++   +   PD  TF  L  A           
Sbjct: 97  APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGE 156

Query: 816 --NSGLVEEG--------------WKYFDSMSTDYNIIPTIEH-----YSCMVDLLGKAG 854
             +S +V  G              +    S+ + Y +   + +     ++ +++     G
Sbjct: 157 GIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNG 216

Query: 855 YLDEAWDFIRTM---PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYN 910
             +EA    R M     +PD     +LL +C   G L   E     + K+    N    N
Sbjct: 217 MPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASN 276

Query: 911 LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            +++L +    + D +++   M+E   +SV+ W+
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEE---RSVVSWT 307


>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
 gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 622

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 222/684 (32%), Positives = 360/684 (52%), Gaps = 85/684 (12%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN-------NKLELATR 452
            + +LQ+C+   +F + K IHG++L++ L S++ V + L+++   +       N L  A  
Sbjct: 16   LALLQSCS---SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72

Query: 453  VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
            +F  +++ NL  +N +I  ++       A+  + +M  SRI PD IT+  L+        
Sbjct: 73   IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI-------- 124

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                       +A +E+  +  G ++H  I+R G   D+YV  S
Sbjct: 125  ---------------------------KASSEMECVLVGEQTHSQIVRFGFQNDVYVENS 157

Query: 573  LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
            L+ MY     +  A  +F  M  R                                   D
Sbjct: 158  LVHMYANCGFIAAAGRIFGQMGFR-----------------------------------D 182

Query: 633  LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
            +VSW S+V+GY   G  + A  +   M +     N+ TW+ +I+G  +N  + +++  F 
Sbjct: 183  VVSWTSMVAGYCKCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFE 238

Query: 693  QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
             M++E +  N T M S++ +C  LG L+ G+  +   +K+    +  + T L+DM+ + G
Sbjct: 239  FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298

Query: 753  NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
            +++ A  VF         SW+ +I G A++G+  +A+  F +++  GF P  +TFTA+L+
Sbjct: 299  DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358

Query: 813  ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
            AC + GLVE+G + +++M  D+ I P +EHY C+VD+LG+AG L EA +FI  M  KP+A
Sbjct: 359  ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNA 418

Query: 873  TIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
             I GALLG+C+I+ + E AE     L K++P +S  Y L+ N+ A + +W+ +E LR  M
Sbjct: 419  PILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMM 478

Query: 933  DEVGVKSVLVWSWIQIDQIVHVFS-AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
             E  VK    WS I+ID  ++ F+  +   HP  G+I  +   ++ +++ +GY  +T   
Sbjct: 479  KEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDA 538

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
            + D+DEEEK   +  H+EKLAI YG+MKTK    IR++KN RVC DCHT  K +S V GR
Sbjct: 539  FFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGR 598

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            E+ +RD  RFHHFR G CSC D W
Sbjct: 599  ELIVRDRNRFHHFRNGVCSCRDYW 622



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 124/270 (45%), Gaps = 36/270 (13%)

Query: 291 IFRSRI------LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           + +SRI         ++K  +++    +G + H+ +++ GF  DV+++ +L++ Y  C  
Sbjct: 108 MLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGF 167

Query: 345 VESANKLFSEVS------------------------DLEDDL------LWNEIIMVKLRN 374
           + +A ++F ++                         ++ D++       W+ +I    +N
Sbjct: 168 IAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKN 227

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             +E AI LF  M+     A    +V ++ +CA +GA   G++ + YV+KS +  NL + 
Sbjct: 228 NCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG 287

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             L+ M+ R   +E A  VF+ + + +  SW+S+I      G+   A   F++M S    
Sbjct: 288 TALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI 347

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           P  +T+  +LS     G  +  L +   M+
Sbjct: 348 PRDVTFTAVLSACSHGGLVEKGLEIYENMK 377


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
            mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/662 (33%), Positives = 350/662 (52%), Gaps = 101/662 (15%)

Query: 415  GKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G+Q+H   ++S L  S+    + L+ MY+  ++   A + FD +   N     +M S Y 
Sbjct: 108  GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                V  + +LF K+ +S                   GS   V              + +
Sbjct: 168  RNNLVYPSLALFRKLIAS-------------------GSATAV--------------DEA 194

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            +  V   A   +         H  +++ GLD D  V  +++D Y K              
Sbjct: 195  AALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGG------------ 242

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
              R++ A                A+K+ + ME+     D+VSWNS+++ Y+  G S +AL
Sbjct: 243  -RRDLGA----------------ARKVFDTMEK-----DVVSWNSMIALYAQNGMSADAL 280

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                     G+Y  ++     +SGS                    IK N+ T+S++L  C
Sbjct: 281  ---------GLYRKMLN----VSGS--------------------IKCNAVTLSAILLAC 307

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
               G +Q GK IH   ++ G  ++ YV T ++DMYSK G ++ AR+ F+K   K + SW+
Sbjct: 308  AHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWS 367

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             MI G+ ++G+G+EA+ +F+E+  +G  P+ ITF ++LAAC ++GL+++G  ++++M   
Sbjct: 368  AMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKR 427

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            + I P +EHY CMVDLLG+AG LDEA+  I+ M  KPDA IWGALL +CRIH ++E AEI
Sbjct: 428  FGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEI 487

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
            +++RLF+L+  N   Y L+ N+ A +  W+DVER+R  +   G++    +S +++    H
Sbjct: 488  SAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTH 547

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
            +F      HP   EIY  L  L+ +M++ GYVP+T  V  D+DEEEK   L  H+EKLAI
Sbjct: 548  LFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAI 607

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             + LM +   + I VIKN RVC+DCHTA K ++ +  REI +RD  RFHHF++G CSC D
Sbjct: 608  AFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGD 667

Query: 1074 CW 1075
             W
Sbjct: 668  YW 669



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 108/195 (55%), Gaps = 6/195 (3%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKC--RDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           +HA ++K G D D  +   +++ Y K   RD+ +A K+F  +   +D + WN +I +  +
Sbjct: 215 LHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME--KDVVSWNSMIALYAQ 272

Query: 374 NEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           N    +A+ L+R+M     S K  + T+  +L ACA  G    GK IH  V++  LE N+
Sbjct: 273 NGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENV 332

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V   ++ MYS+  ++E+A + F  +K+ N+ SW++MI+ Y   G+   A  +FN+M  S
Sbjct: 333 YVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRS 392

Query: 492 RIQPDIITWNCLLSG 506
              P+ IT+  +L+ 
Sbjct: 393 GQNPNYITFISVLAA 407



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/408 (20%), Positives = 156/408 (38%), Gaps = 112/408 (27%)

Query: 313 GVEVHASLIKRG-FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           G ++H   I+ G F  D     AL++ Y  C     A K F E+    + ++   +    
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPS-PNPVIITAMASGY 166

Query: 372 LRNEKWENAIKLFREMQFS-SAKAISRTIVKM-LQACAKVGAFHEGKQIHGYVLKSALES 429
           +RN     ++ LFR++  S SA A+      +   A A++        +H  V+K+ L+ 
Sbjct: 167 VRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDG 226

Query: 430 NLSVCNCLISMYSRNNKLEL--ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           +  V N ++  Y++  + +L  A +VFD+M                              
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTM------------------------------ 256

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG--FRPNGSSVSVVLQAVTEL 545
                 + D+++WN +++ +  +G   + L L R M ++    + N  ++S +L A    
Sbjct: 257 ------EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHA 310

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK----------- 594
             ++ G+  H  ++R GL+ ++YVGTS++DMY K   ++ A++ F  +K           
Sbjct: 311 GTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMI 370

Query: 595 ------------------------NRNIVAWNSLISGYCFKGLFVNAKKMLNQME----- 625
                                   N N + + S+++     GL    +   N M+     
Sbjct: 371 TGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGI 430

Query: 626 ----------------------------EEEIKPDLVSWNSLVSGYSI 645
                                       E ++KPD   W +L+S   I
Sbjct: 431 EPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRI 478



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 16/269 (5%)

Query: 212 SKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFT-SAAKAFFLYFSRSYADWSSFLEDYES 270
           S HA ++K G +     +V +++  Y + G     AA+  F    +    W+S +  Y  
Sbjct: 214 SLHALVVKTG-LDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTMEKDVVSWNSMIALYAQ 272

Query: 271 FG------GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
            G      G  +++L V G +    V      L+ IL  C        G  +H  +++ G
Sbjct: 273 NGMSADALGLYRKMLNVSGSIKCNAVT-----LSAILLACAHAGTIQTGKCIHNQVVRMG 327

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            + +V++  ++++ Y KC  VE A K F ++ + ++ L W+ +I     +   + A+ +F
Sbjct: 328 LEENVYVGTSVVDMYSKCGRVEMARKAFQKIKE-KNILSWSAMITGYGMHGHGQEALDIF 386

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSR 443
            EM  S       T + +L AC+  G   +G+  +  + K   +E  +    C++ +  R
Sbjct: 387 NEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGR 446

Query: 444 NNKLELATRVFDSMK-DHNLSSWNSMISS 471
              L+ A  +   MK   + + W +++S+
Sbjct: 447 AGCLDEAYGLIKEMKVKPDAAIWGALLSA 475


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/621 (33%), Positives = 330/621 (53%), Gaps = 55/621 (8%)

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGS---SVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            + G + + ++L   M++    P  S   S+   L++   L L       H   +R+G   
Sbjct: 24   SQGQFLHAISLFLQMRA-SVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFA 82

Query: 566  DLYVGTSLMDMYVK--------------------NDCLQNAQEVFDNMKNRNIVAWNSLI 605
            D +   +L+++ +K                    +   ++ ++VFD M  R+ V+WN+LI
Sbjct: 83   DRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLI 142

Query: 606  SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG-- 663
             G         A  M+ +M  +   PD  + ++++  ++     K  +V+  +   +G  
Sbjct: 143  LGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFD 202

Query: 664  -----------IYPN------------------VVTWTSLISGSLQNENYRESLKFFIQM 694
                       +Y N                   V W S+++G  QN +  E+L  F +M
Sbjct: 203  NDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRM 262

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
             Q  ++P   T SSL+   G L LL+ GK++H   ++  F  + ++++ LIDMY K GN+
Sbjct: 263  LQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNV 322

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
              AR VF    +  + SW  MIMG+A++G   EA +LF  +     +P+ ITF A+L AC
Sbjct: 323  DIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTAC 382

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
             ++GLV+ GWKYF+SMS  Y  +P++EH + + D LG+AG LDEA++FI  M  KP +++
Sbjct: 383  SHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSV 442

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            W  LL +CR+H +   AE  ++++F+LEP +  ++ ++ N+ + S RW +  +LR SM  
Sbjct: 443  WSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRI 502

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
             G+K     SWI++   +HVF A    HP    I   L     +M + GYVP+   V QD
Sbjct: 503  KGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQD 562

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
            I+EE+K +VL  H+EKLAIV+G++ T     IRV+KN RVC DCH A K++S +  REI 
Sbjct: 563  IEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIV 622

Query: 1055 LRDGARFHHFREGECSCNDCW 1075
            +RD  RFH F++G CSC D W
Sbjct: 623  VRDVNRFHRFKDGNCSCGDFW 643



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 197/438 (44%), Gaps = 60/438 (13%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNF----------YG------ 340
           L   LK C  L    L   +HA  I+ G   D     AL+N           +G      
Sbjct: 52  LPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSG 111

Query: 341 ----KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS 396
               +    ES  K+F E+ +  D + WN +I+    +++ + A+ + REM        +
Sbjct: 112 EGGLESAAYESMRKVFDEMLE-RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 170

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            T+  +L   A+      G  +HGY +K+  ++++ V + LI MY+   +++ + +VFDS
Sbjct: 171 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
             D                                    D + WN +L+G+  +GS +  
Sbjct: 231 FSDC-----------------------------------DAVLWNSMLAGYAQNGSVEEA 255

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           L + R M   G RP   + S ++ A   L LL+ G++ H Y++R   + ++++ +SL+DM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDM 315

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
           Y K   +  A+ VF+ +++ +IV+W ++I GY   G    A  +  +ME   +KP+ +++
Sbjct: 316 YCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITF 375

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            ++++  S  G         + M N  G  P++    +L     +  +  E+  F  +M+
Sbjct: 376 LAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMK 435

Query: 696 QEDIKPNSTTMSSLLQTC 713
              IKP S+  S+LL+ C
Sbjct: 436 ---IKPTSSVWSTLLRAC 450



 Score =  120 bits (301), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 138/295 (46%), Gaps = 3/295 (1%)

Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
           LE   + S  K F     R    W++ +          QE L +  E+   G +  +  L
Sbjct: 115 LESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRH-QEALSMVREMWRDGFMPDTFTL 173

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           + +L +  +      G+ VH   IK GFD DV +  +L++ Y  C  ++ + K+F   SD
Sbjct: 174 STVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSD 233

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
             D +LWN ++    +N   E A+ +FR M  +  + +  T   ++ A   +     GKQ
Sbjct: 234 C-DAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQ 292

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +H Y++++    N+ + + LI MY +   +++A RVF+ ++  ++ SW +MI  Y   G 
Sbjct: 293 LHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGP 352

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPN 531
              A+ LF +M    ++P+ IT+  +L+     G   N       M +  GF P+
Sbjct: 353 TTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPS 407



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 36/259 (13%)

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL---LQTCGGLGLLQNGKEIH 726
           +W   I  +     +  ++  F+QM+   + P S+  +SL   L++C GLGL      +H
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLH 72

Query: 727 CLCLKNGFIKDAYVATGLIDM---------------YSKSGNLKSA-----REVFRKSAN 766
            L +++G   D + A  L+++                S  G L+SA     R+VF +   
Sbjct: 73  ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 132

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL---AACKN--SGLVE 821
           +   SWN +I+G A +   +EA+ +  E+   GF PD  T + +L   A C +   G+V 
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            G+   +    D  +       S ++D+      +D +     +     DA +W ++L  
Sbjct: 193 HGYAIKNGFDNDVFV------GSSLIDMYANCTQMDYSMKVFDSFS-DCDAVLWNSMLAG 245

Query: 882 CRIHGHLEYAEIASRRLFK 900
              +G +E A    RR+ +
Sbjct: 246 YAQNGSVEEALGIFRRMLQ 264


>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/548 (36%), Positives = 304/548 (55%), Gaps = 39/548 (7%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            +P+   WN  L       S  + + L   ++     P+  + S VL+A   L  L  GR 
Sbjct: 90   KPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRI 149

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             HG + + G   +LY+   ++ +Y     +  A+ +F+ M  R++V WN +I+       
Sbjct: 150  LHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIA------- 202

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
                 +++ Q + E               Y ++ +  E               NV +WTS
Sbjct: 203  -----QLIKQGDHE-------------GAYDLFSRMPER--------------NVRSWTS 230

Query: 674  LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
            +I+G +Q    +E++  F +M++  +K N  T+ ++L  C  LG L  G  IH    ++G
Sbjct: 231  MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290

Query: 734  FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
            F ++  ++  LIDMY K G L+ A +VF +   +T+ SW+ MI G A++G  +EA+ LF 
Sbjct: 291  FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350

Query: 794  ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            ++ + G +P+ +TF  LL AC + GL+ EG ++F SM+ DY IIP IEHY CMVDLL +A
Sbjct: 351  DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRA 410

Query: 854  GYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMM 913
            G L EA +FI  MP KP+  +WGALLG+CR+H ++E AE A + L +L+P N   Y ++ 
Sbjct: 411  GLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLS 470

Query: 914  NLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY 973
            N+ A + RWED  R+R  M +  VK    WS I +D +VH F A    HP T +I+    
Sbjct: 471  NIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWE 530

Query: 974  HLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
             L+ EM+  GYVP+T  V  DI+E EK K +  H+EKLA+V+GLM T +  PIR++KN R
Sbjct: 531  ELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLR 590

Query: 1034 VCSDCHTA 1041
            +C DCH+A
Sbjct: 591  ICEDCHSA 598



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 112/479 (23%), Positives = 215/479 (44%), Gaps = 25/479 (5%)

Query: 315 EVHASLIKRGFDFD------VHLKCALMNFYGKCRDVESANKLFSEVSDLEDD-LLWNEI 367
           +VHA +IK            V L CA    +        A ++F  V   + +  +WN  
Sbjct: 46  QVHAQIIKTNAPLSILPLTRVGLVCAFTPSF------HYAQQIFECVEKQKPETFVWNSC 99

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           +      +   +AI LF  ++       + T   +L+AC  +     G+ +HG V K   
Sbjct: 100 LKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 159

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            SNL + N ++ +Y+   ++  A  +F+ M   ++ +WN MI+     G  + A+ LF++
Sbjct: 160 RSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSR 219

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           M    ++    +W  +++G+   G  +  + L   M+  G + N  +V  VL A  +L  
Sbjct: 220 MPERNVR----SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L  G   H Y  R+G   ++ +  +L+DMYVK  CL+ A +VF+ M+ R +V+W+++I G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYP 666
               G    A ++ + M +  I+P+ V++  L+   S  G   E       M ++ GI P
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 395

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            +  +  ++    +     E+ +F + M    +KPN     +LL  C     ++  +E  
Sbjct: 396 QIEHYGCMVDLLSRAGLLHEAHEFILNM---PMKPNGVVWGALLGACRVHKNVEMAEEAI 452

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWNCMIMGFAIY 782
              L+   + D Y    L ++Y+++G   +    R+  +    K    W+ + +   ++
Sbjct: 453 KHLLELDPLNDGYYVV-LSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVH 510



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 4/241 (1%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I   ++ GD   A   F     R+   W+S +  Y   G + +E + ++ ++   GV  
Sbjct: 200 MIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCG-KAKEAIHLFAKMEEAGVKC 258

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               +  +L  C  L A  LG+ +H    + GF  +V +   L++ Y KC  +E A K+F
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 318

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
            E+ +    + W+ +I     + + E A++LF +M     +    T + +L AC+ +G  
Sbjct: 319 EEMEE-RTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLI 377

Query: 413 HEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMIS 470
            EG++    + +   +   +    C++ + SR   L  A     +M    N   W +++ 
Sbjct: 378 SEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLG 437

Query: 471 S 471
           +
Sbjct: 438 A 438


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/677 (31%), Positives = 353/677 (52%), Gaps = 74/677 (10%)

Query: 430  NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
            NL +   +I+ Y+RN++L  A ++FD M   ++ SWNSMI      G + +A  LF++M 
Sbjct: 42   NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101

Query: 490  SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                + ++I+W  +++G+   G  +    L   M                          
Sbjct: 102  ----EKNVISWTTMVNGYLKFGRVELAQRLFLDMHV------------------------ 133

Query: 550  YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
                            D+    +++  Y +N  ++    +F+ M  R++++W S+I G  
Sbjct: 134  ---------------KDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLD 178

Query: 610  FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQSKE-------- 651
              G    A  +  +M    ++P   ++  ++S          G  + G   +        
Sbjct: 179  LNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEF 238

Query: 652  ---ALVII----------HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
               +L+            H + N  +  NVV WT+L++  + N  ++++L+ F  M +  
Sbjct: 239  ISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMG 298

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
              PN +T S  L+ C GL  L  GKEIH + +K G   D +V   L+ MY++ GN+ SA 
Sbjct: 299  ALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAV 358

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             VFR    K + SWN +I+G A +G G  A++ F++++  G  P+ ITFT LL+AC  SG
Sbjct: 359  AVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSG 418

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            ++ +G  +F+ +S   + +   +HY+CMVD+LG+ G LDEA + +R MP K ++ IW AL
Sbjct: 419  MLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLAL 478

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            L +CR+H +LE AE A++ +  LEP  S+ Y L+ N+ A + RW DV R+R  M + G+ 
Sbjct: 479  LSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLV 538

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                 SW+ +    H F +    HP +  IY +L  L  ++K+ GYVPD +    D+++E
Sbjct: 539  KQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDE 598

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            +K ++L  H+E+LAI +GL+ T   + I V+KN RVC DCH+  K MS + GR+I +RD 
Sbjct: 599  QKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDS 658

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFHHF+ G CSC+D W
Sbjct: 659  GRFHHFKNGICSCSDYW 675



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 188/437 (43%), Gaps = 54/437 (12%)

Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
           L+ ++I    RN++  +A+KLF  M      + +     M++ C   G      ++    
Sbjct: 45  LYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWN----SMIKGCLDCGNLGMATRL---- 96

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
                E N+     +++ Y +  ++ELA R+F  M   ++++WN+M+  Y   G V+   
Sbjct: 97  FDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGV 156

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            LF +M       D+I+W  ++ G   +G  +  L + + M   G  P  S+ + VL A 
Sbjct: 157 RLFEEMPVR----DVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSAC 212

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
                   G + HG++++ G  +  ++  SL+  Y     +++A ++F+    +N+V W 
Sbjct: 213 ANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWT 272

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------------------- 631
           +L++ Y +     +A ++   M +    P                               
Sbjct: 273 ALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKL 332

Query: 632 ----DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
               D+   NSLV  Y+  G    A+ +  ++       ++V+W S+I GS Q+     +
Sbjct: 333 GLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEK----DIVSWNSIIVGSAQHGFGLWA 388

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI--HCLCLKNGFIKDAYVATGLI 745
           L FF QM +  + PN  T + LL  C   G+L  G+    +    K+  ++  + A  ++
Sbjct: 389 LIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYAC-MV 447

Query: 746 DMYSKSGNLKSAREVFR 762
           D+  + G L  A E+ R
Sbjct: 448 DILGRCGKLDEAEELVR 464



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 181/414 (43%), Gaps = 49/414 (11%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELLEVWGELHGKGV 290
           +I  Y        A K F     R    W+S ++     G  G    L +   E+  K V
Sbjct: 49  MIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFD---EMPEKNV 105

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
           I  + ++   LK     +A  L +++H          DV    A+++ Y +   VE   +
Sbjct: 106 ISWTTMVNGYLKFGRVELAQRLFLDMHVK--------DVAAWNAMVHGYFENGRVEEGVR 157

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LF E+  + D + W  +I     N K E A+ +F++M  S  +    T   +L ACA   
Sbjct: 158 LFEEMP-VRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAV 216

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
            F+ G Q+HG+V+K     +  +   LI+ Y+   K+E A ++F+               
Sbjct: 217 EFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNET------------- 263

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
                                 +  +++ W  LL+ +  +  +Q+ L +   M  +G  P
Sbjct: 264 ----------------------LTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALP 301

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
           N S+ S+ L+A   L  L  G+E H   ++ GL+ D++VG SL+ MY +   + +A  VF
Sbjct: 302 NQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVF 361

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            N+  ++IV+WNS+I G    G  + A    NQM    + P+ +++  L+S  S
Sbjct: 362 RNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACS 415



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 2/275 (0%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y E G      + F     R    W+S +   +   G+ +E L V+ ++   GV 
Sbjct: 141 AMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLD-LNGKSEEALFVFKKMLRSGVE 199

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L  C   + F LGV+VH  ++K G  F   +  +L+ FY  C  +E A+K+
Sbjct: 200 PTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKI 259

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+E +  ++ + W  ++   + N K ++A+++F +M    A     T    L+AC  + A
Sbjct: 260 FNE-TLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEA 318

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
             +GK+IH   +K  LE+++ V N L+ MY+    +  A  VF ++ + ++ SWNS+I  
Sbjct: 319 LDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVG 378

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
               G+   A   FN+M    + P+ IT+  LLS 
Sbjct: 379 SAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSA 413



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/444 (20%), Positives = 181/444 (40%), Gaps = 84/444 (18%)

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +N +L+ A  +FD +   NL  +  MI+ YT    +  A  LF++M+      D+++WN 
Sbjct: 24  KNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR----DVVSWNS 79

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++ G    G+      L   M      P  + +S                          
Sbjct: 80  MIKGCLDCGNLGMATRLFDEM------PEKNVIS-------------------------- 107

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
                   T++++ Y+K   ++ AQ +F +M  +++ AWN+++ GY   G      ++  
Sbjct: 108 -------WTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFE 160

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
           +M       D++SW S++ G  + G+S+EAL +   M  SG+ P   TW           
Sbjct: 161 EMPVR----DVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEP---TW----------- 202

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
                                +T + +L  C        G ++H   +K G     +++ 
Sbjct: 203 ---------------------STFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISV 241

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            LI  Y+    ++ A ++F ++  K +  W  ++  +      ++A+ +F ++ + G  P
Sbjct: 242 SLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALP 301

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           +  TF+  L AC     +++G K   +M+    +   +   + +V +  + G ++ A   
Sbjct: 302 NQSTFSITLKACCGLEALDKG-KEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAV 360

Query: 863 IRTMPFKPDATIWGALLGSCRIHG 886
            R +  K D   W +++     HG
Sbjct: 361 FRNINEK-DIVSWNSIIVGSAQHG 383


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 803

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/769 (30%), Positives = 382/769 (49%), Gaps = 79/769 (10%)

Query: 345  VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
            +E A +LF E++   D  +WN +I        +  A++L+  M FS  KA S T   +++
Sbjct: 76   MEDALQLFDEMNK-ADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIK 134

Query: 405  ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
            +   + +  EGK+IH  V+K    S++ VCN LIS+Y +      A +VF+ M +     
Sbjct: 135  SVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPER---- 190

Query: 465  WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                                           DI++WN ++SG+         L L + M 
Sbjct: 191  -------------------------------DIVSWNSMISGYLALEDGFRSLMLFKEML 219

Query: 525  SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCL 583
              GF+P+  S    L A + +     G+E H + +R+ ++  D+ V TS++DMY K   +
Sbjct: 220  KFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEV 279

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE-IKPDLVSW------ 636
              A+ +F  +  RNIVAWN LI  Y       +A     +M E+  ++PD+++       
Sbjct: 280  SYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPA 339

Query: 637  -------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
                                      +L+  Y  WGQ K A VI   +       N+++W
Sbjct: 340  CAILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAE----KNLISW 395

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             S+I+  +QN     +L+ F ++    + P+STT++S+L        L  G++IH   +K
Sbjct: 396  NSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVK 455

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            + +  +  +   L+ MY+  G+L+ AR+ F     K + SWN +IM +A++G G+ ++ L
Sbjct: 456  SRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCL 515

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F E++ +   P+  TF +LLAAC  SG+V+EGW+YF+SM  +Y I P IEHY  M+DL+G
Sbjct: 516  FSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIG 575

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            + G    A  FIR MPF P A IWG+LL + R H  +  AE A+ ++FK+E  N+  Y L
Sbjct: 576  RTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVL 635

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            ++N+ A + RWEDV R++  M+  G+      S ++     HV +     H  T +IY E
Sbjct: 636  LLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIY-E 694

Query: 972  LYHLVSEM-----KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
            +  +VS M     ++  YV     + ++   + +      H+ +LA  +GL+ T++   +
Sbjct: 695  VLDIVSRMIGEEEEEDSYVHYVSKLRRETLAKSRSNSPRRHSVRLATCFGLISTETGRTV 754

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             V  NTR+C  CH   +  S +  REI + D   FHHF  G CSC + W
Sbjct: 755  TVRNNTRICRKCHEFLEKASKMTRREIVVGDSKIFHHFSNGRCSCGNYW 803



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 138/565 (24%), Positives = 248/565 (43%), Gaps = 86/565 (15%)

Query: 240 FGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           F D      A  L+   + AD   W+  ++ + S G    E L+++  +   GV   S  
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYF-EALQLYCRMVFSGVKADSFT 128

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              ++K  T + +   G ++HA +IK  F  DV++  +L++ Y K      A K+F E+ 
Sbjct: 129 YPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMP 188

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D + WN +I   L  E    ++ LF+EM     K    + +  L AC+ V + + GK
Sbjct: 189 E-RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGK 247

Query: 417 QIHGYVLKSALES-NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           ++H + ++S +E+ ++ V   ++ MYS+  ++  A R+F  +   N+ +WN +I  Y   
Sbjct: 248 ELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARN 307

Query: 476 GYVDVAWSLFNKMNSSR-IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
             V  A+  F KM+    +QPD+IT   LL                              
Sbjct: 308 SRVTDAFLCFQKMSEQNGLQPDVITLINLLPA---------------------------- 339

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
                 A+ E      GR  HGY +R G    + + T+L+DMY +   L++A+ +FD + 
Sbjct: 340 -----CAILE------GRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIA 388

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------- 632
            +N+++WNS+I+ Y   G   +A ++  ++ +  + PD                      
Sbjct: 389 EKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQ 448

Query: 633 -------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                         +  NSLV  Y++ G  ++A    +H+    +  +VV+W S+I    
Sbjct: 449 IHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHV----LLKDVVSWNSIIMAYA 504

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
            +   R S+  F +M    + PN +T +SLL  C   G++  G E      +   I    
Sbjct: 505 VHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 564

Query: 740 VATG-LIDMYSKSGNLKSAREVFRK 763
              G ++D+  ++GN  SA+   R+
Sbjct: 565 EHYGYMLDLIGRTGNFSSAKRFIRE 589



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 226/494 (45%), Gaps = 51/494 (10%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L   K  HA +IK+  +  SD  V  SLI  Y++ G    A K F     R    W+S +
Sbjct: 142 LEEGKKIHAMVIKLRFV--SDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMI 199

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKR 323
             Y +     + L+ ++ E+   G  F+    + +  L  C+ + +  +G E+H   ++ 
Sbjct: 200 SGYLALEDGFRSLM-LFKEMLKFG--FKPDRFSTMSALGACSHVYSPNMGKELHCHAVRS 256

Query: 324 GFDF-DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
             +  DV +  ++++ Y K  +V  A ++F  +    + + WN +I    RN +  +A  
Sbjct: 257 RIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQ-RNIVAWNVLIGCYARNSRVTDAFL 315

Query: 383 LFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            F++M + +  +    T++ +L ACA +    EG+ IHGY ++     ++ +   LI MY
Sbjct: 316 CFQKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRGFLPHIVLDTALIDMY 371

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
               +L+ A  +FD + + NL SWNS+I++Y   G    A  LF K+  S + PD     
Sbjct: 372 GEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPD----- 426

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
                                          ++++ +L A  E   L  GR+ H YI+++
Sbjct: 427 ------------------------------STTIASILPAYAESLSLSEGRQIHAYIVKS 456

Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
               +  +  SL+ MY     L++A++ F+++  +++V+WNS+I  Y   G    +  + 
Sbjct: 457 RYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLF 516

Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQ 680
           ++M   ++ P+  ++ SL++  SI G   E       MK   GI P +  +  ++    +
Sbjct: 517 SEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGR 576

Query: 681 NENYRESLKFFIQM 694
             N+  + +F  +M
Sbjct: 577 TGNFSSAKRFIREM 590



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 141/326 (43%), Gaps = 46/326 (14%)

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T  +  +  +  +++A ++FD M   +   WN +I G+   GL+  A ++  +M    +K
Sbjct: 64  TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVK 123

Query: 631 PDLVSW-----------------------------------NSLVSGYSIWGQSKEALVI 655
            D  ++                                   NSL+S Y   G S +A  +
Sbjct: 124 ADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKV 183

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
              M       ++V+W S+ISG L  E+   SL  F +M +   KP+  +  S L  C  
Sbjct: 184 FEEMPER----DIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSH 239

Query: 716 LGLLQNGKEIHCLCLKNGF-IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
           +     GKE+HC  +++     D  V T ++DMYSK G +  A  +F+    + + +WN 
Sbjct: 240 VYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNV 299

Query: 775 MIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
           +I  +A      +A L F ++ E  G QPD IT   LL AC     + EG +     +  
Sbjct: 300 LIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEG-RTIHGYAMR 354

Query: 834 YNIIPTIEHYSCMVDLLGKAGYLDEA 859
              +P I   + ++D+ G+ G L  A
Sbjct: 355 RGFLPHIVLDTALIDMYGEWGQLKSA 380



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           ++ SG ++ A ++F +        WN MI GF   G   EA+ L+  ++ +G + D+ T+
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
             ++ +      +EEG K   +M      +  +   + ++ L  K G   +A      MP
Sbjct: 130 PFVIKSVTGISSLEEG-KKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMP 188

Query: 868 FKPDATIWGALL 879
            + D   W +++
Sbjct: 189 -ERDIVSWNSMI 199


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/609 (34%), Positives = 323/609 (53%), Gaps = 49/609 (8%)

Query: 509  THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL-DYDL 567
             HG       LL+G+ +    P   +   +L A    R        H  +  + +   D 
Sbjct: 229  AHGRLAQATALLQGLPA----PTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDP 284

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            ++ T L++ Y     L  A++VFD    +NI  WN+++           A   L  M   
Sbjct: 285  FLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRL 344

Query: 628  EIKPDLVSW--------------------------NSLVSGYSIWGQSKEALVIIHHMKN 661
             +  D  S+                          +++  GY +   +  A  +I     
Sbjct: 345  GVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGL--HTHVATTLIDCYAK 402

Query: 662  SGIYP------------NVVTWTSLISGSLQNENYRESLKFFIQM--QQEDIKPNSTTMS 707
             GI              N+V+W+++I    +NE   ++++ F +M     D+ PNS T+ 
Sbjct: 403  LGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIV 462

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR-KSAN 766
            S+L  C G+  L  GK +H   L+ GF     V   L+ MY K G L++ R +F      
Sbjct: 463  SVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRR 522

Query: 767  KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
            + + SWN +I G+ ++G G+E++ +F E++E G  P+ ITF ++L AC + GLVE+G K 
Sbjct: 523  RNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKL 582

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            F+SM  +YN+ P  EHY+CMVDLLG+AG LDEA + I++M  +P   +WG+LLG+CRIHG
Sbjct: 583  FESM-VEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHG 641

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            H+EYAE+A   LF LEP N+ NY L+ ++ A +     V+ L+  ++E  ++ V   SWI
Sbjct: 642  HVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGCSWI 701

Query: 947  QIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS 1006
            ++ + ++ F +    +P   E+   +   V++MK  GYVPDTR V  DI+EEEK ++LL 
Sbjct: 702  EVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLG 761

Query: 1007 HTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFRE 1066
            H+EKLA+ +GL+KT S   IR+ KN R+C DCH+  K++S    REI +RD  RFHHFR 
Sbjct: 762  HSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHHFRN 821

Query: 1067 GECSCNDCW 1075
            G CSC D W
Sbjct: 822  GVCSCRDYW 830



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 11/298 (3%)

Query: 218 IKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQ 276
           ++   ++ SD  + + LI  Y       +A + F     ++   W++ L+   +     +
Sbjct: 274 LEADPVFRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKAL-ALADHGE 332

Query: 277 ELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV-----EVHASLIKRGFDFDVHL 331
           E L    ++   GV   S      LK C    A  L       E+HA  I+RG+    H+
Sbjct: 333 EALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHV 392

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
              L++ Y K   V  A ++F+ + D  + + W+ +I    +NE+  +AI++F+EM  S 
Sbjct: 393 ATTLIDCYAKLGIVSYAERVFTSMPD-RNLVSWSAMIGCYAKNERPGDAIQIFQEMMASD 451

Query: 392 AKAI--SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           A  +  S TIV +L ACA V A  +GK +H Y+L+   +  +SV N L++MY +   LE 
Sbjct: 452 ADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLET 511

Query: 450 ATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
              +F+ + +  N+ SWNS+IS Y   G+   +  +F +M    I P+IIT+  +L  
Sbjct: 512 GRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGA 569



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 160/357 (44%), Gaps = 44/357 (12%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +I +Y  L  +  A  +F++        +I  WN +L         +  LT L  M  LG
Sbjct: 290 LIEAYAALSALPAARQVFDEAPVK----NIFVWNAMLKALALADHGEEALTCLADMGRLG 345

Query: 528 FRPNGSSVSVVLQA-----VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
              +  S +  L+A      + L      RE H + +R G     +V T+L+D Y K   
Sbjct: 346 VPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGI 405

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEIKPDLVSWNSLV 640
           +  A+ VF +M +RN+V+W+++I  Y       +A ++  +M   + ++ P+ ++  S++
Sbjct: 406 VSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVL 465

Query: 641 ---SGYSIWGQSK-----------EALVII------HHMK----NSGIY--------PNV 668
              +G +  GQ K           + LV +       +MK     +G Y         NV
Sbjct: 466 HACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNV 525

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           V+W SLISG   +   RESL+ F +M +E I PN  T  S+L  C  +GL++ GK++   
Sbjct: 526 VSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFES 585

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGN 784
            ++      A     ++D+  ++G L  A E+ +      +   W  ++    I+G+
Sbjct: 586 MVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGH 642



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 7/290 (2%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
           C     +     + V+  HA  I+ G   ++  +  +LI  Y + G  + A + F     
Sbjct: 360 CIAASASHLPASARVREMHAHAIRRGYGLHTH-VATTLIDCYAKLGIVSYAERVFTSMPD 418

Query: 256 RSYADWSSFLEDY---ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWL 312
           R+   WS+ +  Y   E  G  +Q   E+        ++  S  +  +L  C  + A   
Sbjct: 419 RNLVSWSAMIGCYAKNERPGDAIQIFQEMMAS--DADLVPNSITIVSVLHACAGVNALGQ 476

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA +++RGFD  V +  ALM  Y KC  +E+   +F+ +    + + WN +I    
Sbjct: 477 GKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYG 536

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            +     ++++F EM          T V +L AC+ VG   +GK++   +++  +     
Sbjct: 537 MHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAE 596

Query: 433 VCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
              C++ +  R  +L+ A  +  SM+   +   W S++ +    G+V+ A
Sbjct: 597 HYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYA 646


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/559 (35%), Positives = 304/559 (54%), Gaps = 39/559 (6%)

Query: 552  RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
            R+ H     +G+  +L V   L+  Y     L +A  +FD M  R+ V+W+ ++ G+   
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSW----------------------------------- 636
            G ++N      ++     +PD  +                                    
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
             +LV  Y    + ++A  +   M       ++VTWT +I G  +  N  ESL  F +M++
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXER----DLVTWTVMIGGYAECGNANESLVLFDKMRE 930

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            E + P+   M +++  C  LG +   + I     +  F  D  + T +IDM++K G ++S
Sbjct: 931  EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVES 990

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            ARE+F +   K + SW+ MI  +  +G G++A+ LF  +L +G  P+ IT  +LL AC +
Sbjct: 991  AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSH 1050

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
            +GLVEEG ++F  M  DY++   ++HY+C+VDLLG+AG LDEA   I +M  + D  +WG
Sbjct: 1051 AGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWG 1110

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            A LG+CR H  +  AE A+  L +L+P N  +Y L+ N+ A + RWEDV ++R  M +  
Sbjct: 1111 AFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRR 1170

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            +K +  W+WI++D   H FS     HP + EIY  L  L ++++ +GYVPDT  V  D+D
Sbjct: 1171 LKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVD 1230

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            EE K  +L +H+EKLAI +GL+ T    PIR+IKN RVC DCHT  K +S + GR I +R
Sbjct: 1231 EELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVR 1290

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFHHF+EG CSC D W
Sbjct: 1291 DANRFHHFKEGACSCGDYW 1309



 Score =  322 bits (824), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 176/530 (33%), Positives = 280/530 (52%), Gaps = 39/530 (7%)

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
            + A+   R L   R+ H     +G+  ++ V   L+  Y     L +A  +FD M  R+ 
Sbjct: 66   ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW---------------------- 636
            V+W+ ++ G+   G ++N      ++     +PD  +                       
Sbjct: 126  VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185

Query: 637  -------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                          +LV  Y    + ++A  +   M+      ++VTWT +I G  +   
Sbjct: 186  VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER----DLVTWTVMIGGYAECGK 241

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              ESL  F +M++E + P+   M +++  C  LG +   + I     +  F  D  + T 
Sbjct: 242  ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTA 301

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            +IDMY+K G ++SARE+F +   K + SW+ MI  +  +G G++A+ LF  +L +G  PD
Sbjct: 302  MIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPD 361

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             IT  +LL AC ++GLVEEG ++F SM  DY++   ++HY+C+VDLLG+AG LDEA   I
Sbjct: 362  KITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLI 421

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
            ++M  + D  +WGA LG+CR H  +  AE A+  L +L+  N  +Y L+ N+ A + RWE
Sbjct: 422  KSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWE 481

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            DV ++R  M +  +K    W+WI++D   H FS     HP + EIY  L  L ++++ +G
Sbjct: 482  DVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVG 541

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
            YVPDT  V  D+DEE K  +L +H+EKLAI +GL+ T    PIR+IKN R
Sbjct: 542  YVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 77/387 (19%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            L+ FY   R ++ A  LF  +  + D + W+ ++    +   + N    FRE+    A+ 
Sbjct: 776  LVXFYSYYRALDDAYGLFDGMC-VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARP 834

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
             + T+  +++AC  +     G+ IH  V K  L+ +  VC  L+ MY +  ++E A  +F
Sbjct: 835  DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLF 894

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            D M + +L +W  MI  Y   G  + +  LF+KM    + PD +                
Sbjct: 895  DKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKV---------------- 938

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                              + V+VV  A  +L  +   R    YI R     D+ +GT+++
Sbjct: 939  ------------------AMVTVVF-ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMI 979

Query: 575  DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            DM+ K  C+++A+E+FD M+ +N+++W+++I+ Y                          
Sbjct: 980  DMHAKCGCVESAREIFDRMEEKNVISWSAMIAAY-------------------------- 1013

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
                   GY   GQ ++AL +   M  SGI PN +T  SL+          E L+FF  M
Sbjct: 1014 -------GYH--GQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXM 1064

Query: 695  QQE-----DIKPNSTTMSSLLQTCGGL 716
             ++     D+K + T +  LL   G L
Sbjct: 1065 WEDYSVRXDVK-HYTCVVDLLGRAGRL 1090



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 155/334 (46%), Gaps = 36/334 (10%)

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           N+   N +I  Y+    +D A+ LF+ M       D ++W+ ++ G    G Y N     
Sbjct: 93  NIVVANKLIYFYSYYRALDDAYGLFDGMCVR----DSVSWSVMVGGFAKVGDYINCFGTF 148

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
           R +   G RP+  ++  V++A  +L+ L+ GR  H  + + GLD D +V  +L+DMYVK 
Sbjct: 149 RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKC 208

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             +++A+ +FD M+ R++V W  +I GY   G    +  +  +M EE + PD V+  ++V
Sbjct: 209 REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVV 268

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIY-------------------------------PNVV 669
              +  G   +A +I  +++                                     NV+
Sbjct: 269 FACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVI 328

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           +W+++I+    +   R++L  F  M    + P+  T++SLL  C   GL++ G       
Sbjct: 329 SWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSM 388

Query: 730 LKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFR 762
            ++  ++ D    T ++D+  ++G L  A ++ +
Sbjct: 389 WEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIK 422



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 150/330 (45%), Gaps = 36/330 (10%)

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             NL   N ++  Y+    +D A+ LF+ M       D ++W+ ++ G    G Y N    
Sbjct: 768  QNLIVANKLVXFYSYYRALDDAYGLFDGMCVR----DSVSWSVMVGGFAKVGDYMNCFGT 823

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             R +   G RP+  ++  V++A  +L+ L+ GR  H  + + GLD D +V  +L+DMY K
Sbjct: 824  FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 883

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
               +++A+ +FD M  R++V W  +I GY   G    +  + ++M EE + PD V+  ++
Sbjct: 884  CREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTV 943

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIY-------------------------------PNV 668
            V   +  G   +A  I  +++                                     NV
Sbjct: 944  VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 1003

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
            ++W+++I+    +   R++L  F  M +  I PN  T+ SLL  C   GL++ G      
Sbjct: 1004 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSX 1063

Query: 729  CLKNGFIK-DAYVATGLIDMYSKSGNLKSA 757
              ++  ++ D    T ++D+  ++G L  A
Sbjct: 1064 MWEDYSVRXDVKHYTCVVDLLGRAGRLDEA 1093



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 12/322 (3%)

Query: 192 SSGFCFLNETN-KF--------RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGD 242
           SS F FL   N KF        R L+ V+  HAQ    G + N   +   LI+ Y  +  
Sbjct: 51  SSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIV-VANKLIYFYSYYRA 109

Query: 243 FTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILK 302
              A   F     R    WS  +  +   G  +      + EL   G    +  L  +++
Sbjct: 110 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYIN-CFGTFRELIRCGARPDNYTLPFVIR 168

Query: 303 LCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
            C  L    +G  +H  + K G D D  +  AL++ Y KCR++E A  LF ++ +  D +
Sbjct: 169 ACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQE-RDLV 227

Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
            W  +I       K   ++ LF +M+          +V ++ ACAK+GA H+ + I  Y+
Sbjct: 228 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 287

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
            +   + ++ +   +I MY++   +E A  +FD M++ N+ SW++MI++Y   G    A 
Sbjct: 288 QRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 347

Query: 483 SLFNKMNSSRIQPDIITWNCLL 504
            LF  M SS + PD IT   LL
Sbjct: 348 DLFPMMLSSGMLPDKITLASLL 369



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 3/298 (1%)

Query: 207  LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
            L+ V+  H Q    G + N   +   L+  Y  +     A   F     R    WS  + 
Sbjct: 751  LTQVRQVHXQASVHGMLQNLI-VANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809

Query: 267  DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
             +   G +       + EL   G    +  L  +++ C  L    +G  +H  + K G D
Sbjct: 810  GFAKVG-DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 868

Query: 327  FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
             D  +  AL++ YGKCR++E A  LF ++ +  D + W  +I           ++ LF +
Sbjct: 869  LDHFVCAALVDMYGKCREIEDARFLFDKMXE-RDLVTWTVMIGGYAECGNANESLVLFDK 927

Query: 387  MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
            M+          +V ++ ACAK+GA H+ + I  Y+ +   + ++ +   +I M+++   
Sbjct: 928  MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987

Query: 447  LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            +E A  +FD M++ N+ SW++MI++Y   G    A  LF  M  S I P+ IT   LL
Sbjct: 988  VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLL 1045



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 110/244 (45%), Gaps = 8/244 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +L+  Y++  +   A   F     R    W+  +  Y   G +  E L ++ ++  +GV+
Sbjct: 200 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECG-KANESLVLFEKMREEGVV 258

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  ++  C KL A      +   + ++ F  DV L  A+++ Y KC  VESA ++
Sbjct: 259 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 318

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  + + ++ + W+ +I     + +   A+ LF  M  S       T+  +L AC+  G 
Sbjct: 319 FDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGL 377

Query: 412 FHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSM---KDHNLSSWNS 467
             EG +    + +  ++ +++    C++ +  R  +L+ A ++  SM   KD  L  W +
Sbjct: 378 VEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGL--WGA 435

Query: 468 MISS 471
            + +
Sbjct: 436 FLGA 439


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
            [Glycine max]
          Length = 609

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/584 (36%), Positives = 324/584 (55%), Gaps = 39/584 (6%)

Query: 527  GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC---L 583
               P  SS+  ++   T LR LK   +   Y ++   + +  V T L++    N     +
Sbjct: 30   ALEPPSSSILSLIPKCTSLRELK---QIQAYTIKTHQN-NPTVLTKLINFCTSNPTIASM 85

Query: 584  QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             +A  +FD +   +IV +N++  GY      + A  + +Q+    + PD  +++SL+   
Sbjct: 86   DHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKAC 145

Query: 644  SIW-----GQSKEALVIIHHMKNS--------GIY------------------PNVVTWT 672
            +       G+    L +   + ++         +Y                  P VV + 
Sbjct: 146  ARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYN 205

Query: 673  SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            ++I+   +N    E+L  F ++Q+  +KP   TM   L +C  LG L  G+ IH    KN
Sbjct: 206  AIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKN 265

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            GF +   V T LIDMY+K G+L  A  VF+    +   +W+ MI+ +A +G+G +AI + 
Sbjct: 266  GFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISML 325

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             E+ +   QPD ITF  +L AC ++GLVEEG++YF SM+ +Y I+P+I+HY CM+DLLG+
Sbjct: 326  REMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGR 385

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG L+EA  FI  +P KP   +W  LL SC  HG++E A++  +R+F+L+  +  +Y ++
Sbjct: 386  AGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVIL 445

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             NL A + RW+DV  LR  M + G   V   S I+++ +VH F +    H  +  ++  L
Sbjct: 446  SNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHAL 505

Query: 973  YHLVSEMKKLGYVPDTRCV-YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
              LV E+K  GYVPDT  V Y DI++EEK  VL  H+EKLAI YGL+ T     IRV+KN
Sbjct: 506  DELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKN 565

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVC DCH AAK++SL+ GR+I LRD  RFHHF++G+CSC D W
Sbjct: 566  LRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 173/380 (45%), Gaps = 40/380 (10%)

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           ++ A+++F ++    D +L+N +     R +    AI L  ++  S       T   +L+
Sbjct: 85  MDHAHRMFDKIPQ-PDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLK 143

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           ACA++ A  EGKQ+H   +K  +  N+ VC  LI+MY+  N                   
Sbjct: 144 ACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACND------------------ 185

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                        VD A  +F+K+     +P ++ +N +++    +      L L R +Q
Sbjct: 186 -------------VDAARRVFDKIG----EPCVVAYNAIITSCARNSRPNEALALFRELQ 228

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
             G +P   ++ V L +   L  L  GR  H Y+ +NG D  + V T+L+DMY K   L 
Sbjct: 229 ESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLD 288

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
           +A  VF +M  R+  AW+++I  Y   G    A  ML +M++ +++PD +++  ++   S
Sbjct: 289 DAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACS 348

Query: 645 IWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             G  +E     H M +  GI P++  +  +I    +     E+ KF  ++    IKP  
Sbjct: 349 HTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELP---IKPTP 405

Query: 704 TTMSSLLQTCGGLGLLQNGK 723
               +LL +C   G ++  K
Sbjct: 406 ILWRTLLSSCSSHGNVEMAK 425



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 165/364 (45%), Gaps = 31/364 (8%)

Query: 140 PKLHSIYHHFNTRTSINQNRHSHKPNSITNSPTS---LALPPTDTLAKQAQLSCISSGFC 196
           P L  + H     T +N     H+PN+    P S   L+L P  T  ++           
Sbjct: 5   PILQCVSHSL---TKLNTEAPRHEPNTAALEPPSSSILSLIPKCTSLRE----------- 50

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L +   +  + + ++    + K+     S+  + S+   +  F          F   +R
Sbjct: 51  -LKQIQAYT-IKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMAR 108

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
            YA           F   ++ +L +  ++   G++      + +LK C +L A   G ++
Sbjct: 109 GYA----------RFDDPLRAIL-LCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQL 157

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H   +K G   ++++   L+N Y  C DV++A ++F ++ +    + +N II    RN +
Sbjct: 158 HCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGE-PCVVAYNAIITSCARNSR 216

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
              A+ LFRE+Q S  K    T++  L +CA +GA   G+ IH YV K+  +  + V   
Sbjct: 217 PNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTA 276

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI MY++   L+ A  VF  M   +  +W++MI +Y   G+   A S+  +M  +++QPD
Sbjct: 277 LIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPD 336

Query: 497 IITW 500
            IT+
Sbjct: 337 EITF 340



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/449 (20%), Positives = 186/449 (41%), Gaps = 77/449 (17%)

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           E   ++ +  S +I+ ++  C    +  E KQI  Y +K+  ++N +V   LI       
Sbjct: 25  EPNTAALEPPSSSILSLIPKCT---SLRELKQIQAYTIKTH-QNNPTVLTKLI------- 73

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
                          N  + N  I+S      +D A  +F+K+     QPDI+ +N +  
Sbjct: 74  ---------------NFCTSNPTIAS------MDHAHRMFDKIP----QPDIVLFNTMAR 108

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
           G+         + L   +   G  P+  + S +L+A   L+ L+ G++ H   ++ G+  
Sbjct: 109 GYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGD 168

Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
           ++YV  +L++MY   + +  A+ VFD +    +VA+N++I+          A  +  +++
Sbjct: 169 NMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQ 228

Query: 626 EEEIKP------------------DLVSW-----------------NSLVSGYSIWGQSK 650
           E  +KP                  DL  W                  +L+  Y+  G   
Sbjct: 229 ESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLD 288

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           +A+ +   M       +   W+++I     + +  +++    +M++  ++P+  T   +L
Sbjct: 289 DAVSVFKDMPRR----DTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGIL 344

Query: 711 QTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-T 768
             C   GL++ G E  H +  + G +        +ID+  ++G L+ A +   +   K T
Sbjct: 345 YACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPT 404

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLE 797
              W  ++   + +GN + A L+   + E
Sbjct: 405 PILWRTLLSSCSSHGNVEMAKLVIQRIFE 433



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 126/294 (42%), Gaps = 5/294 (1%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L    + + L   K  H   +K+G + ++  +  +LI  Y    D  +A + F      
Sbjct: 141 LLKACARLKALEEGKQLHCLAVKLG-VGDNMYVCPTLINMYTACNDVDAARRVFDKIGEP 199

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               +++ +    +      E L ++ EL   G+      + + L  C  L A  LG  +
Sbjct: 200 CVVAYNAIITSC-ARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWI 258

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           H  + K GFD  V +  AL++ Y KC  ++ A  +F ++    D   W+ +I+    +  
Sbjct: 259 HEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPR-RDTQAWSAMIVAYATHGH 317

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVLKSALESNLSVCN 435
              AI + REM+ +  +    T + +L AC+  G   EG +  H    +  +  ++    
Sbjct: 318 GSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYG 377

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSS-WNSMISSYTGLGYVDVAWSLFNKM 488
           C+I +  R  +LE A +  D +        W +++SS +  G V++A  +  ++
Sbjct: 378 CMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRI 431


>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/433 (44%), Positives = 270/433 (62%), Gaps = 16/433 (3%)

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            + H +K     PN+  W ++I G + N+ + ++++F+  M+ E   PN+ T   +L+ C 
Sbjct: 68   LFHQIKQ----PNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACA 123

Query: 715  GLGLLQNGKEIHCLCLKN---------GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
             L  LQ G +IH L +K          G +++ +V T L+DMY+K GN++ AR VF    
Sbjct: 124  RLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 183

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELL---ETGFQPDAITFTALLAACKNSGLVEE 822
             K + SW  MI G+A+ G  KEAI LF ++    + G +PD  TF  LL  C ++GLV+E
Sbjct: 184  EKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDE 243

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            G +YF+SM   +++ P+IEHY CMVDLLG+AG LDEA   IR MP + +A +WGALLG+C
Sbjct: 244  GRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGAC 303

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            RIH   + AE+A ++L +LEP NS NY L+ N+ + + +W++  ++R SM+E  ++    
Sbjct: 304  RIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPG 363

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             SWI++D IVH F      HP + +IY +L  L  +MK  GYVP T  V  DI+EEEK  
Sbjct: 364  CSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEH 423

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
             L  H+EKLAI +GL+     A IRV+KN RVC DCH A K +S + GREI +RD  RFH
Sbjct: 424  FLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFH 483

Query: 1063 HFREGECSCNDCW 1075
             FREG CSCND W
Sbjct: 484  CFREGSCSCNDYW 496



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 12/171 (7%)

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           QP+I  WN ++ G  ++  + + +     M+S GF PN  +   VL+A   L  L+ G +
Sbjct: 74  QPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVK 133

Query: 554 SHGYILRN---------GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
            H  +++          G+  +++VGTSL+DMY K   ++ A+ VFD M  ++IV+W ++
Sbjct: 134 IHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 193

Query: 605 ISGYCFKGLFVNAKKMLNQMEEEE---IKPDLVSWNSLVSGYSIWGQSKEA 652
           I GY   GL   A  +  QM+ E    IKPD  ++  L+ G +  G   E 
Sbjct: 194 IQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEG 244



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 17/188 (9%)

Query: 335 LMNFYGKCR----DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           L+N   +C     D      LF ++    +  LWN +I   + N+ +++AI+ +  M+  
Sbjct: 48  LLNMILRCSFDFSDTNYTRFLFHQIKQ-PNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSE 106

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS---------ALESNLSVCNCLISMY 441
                + T   +L+ACA++     G +IH  V+K           +  N+ V   L+ MY
Sbjct: 107 GFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMY 166

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM---NSSRIQPDII 498
           ++   +E A  VFD M + ++ SW +MI  Y   G    A  LF +M   N   I+PD  
Sbjct: 167 AKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGN 226

Query: 499 TWNCLLSG 506
           T+  LL G
Sbjct: 227 TFIGLLCG 234



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 97/210 (46%), Gaps = 15/210 (7%)

Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR---------GFD 326
            + +E +G +  +G +  +     +LK C +L+   LGV++H  ++K          G  
Sbjct: 94  DDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMV 153

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
            +V +  +L++ Y KC ++E A  +F  + + +D + W  +I     N   + AI LF +
Sbjct: 154 RNVFVGTSLVDMYAKCGNMEKARSVFDGMPE-KDIVSWGAMIQGYALNGLPKEAIDLFLQ 212

Query: 387 MQFSSAKAI---SRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNLSVCNCLISMYS 442
           MQ  +   I     T + +L  C   G   EG++    + +  +L  ++    C++ +  
Sbjct: 213 MQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLG 272

Query: 443 RNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           R   L+ A ++  +M  + N   W +++ +
Sbjct: 273 RAGLLDEAHQLIRNMPMEANAIVWGALLGA 302



 Score = 43.1 bits (100), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 13/164 (7%)

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
           G   D Y+   ++       +    R +F +     +  WN MI G        +AI  +
Sbjct: 41  GLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFY 100

Query: 793 HELLETGFQPDAITFTALLAAC----------KNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
             +   GF P+  TF  +L AC          K   LV + W +   M  +  ++  +  
Sbjct: 101 GLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIM--EMGMVRNVFV 158

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            + +VD+  K G +++A      MP K D   WGA++    ++G
Sbjct: 159 GTSLVDMYAKCGNMEKARSVFDGMPEK-DIVSWGAMIQGYALNG 201


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
            [Vitis vinifera]
          Length = 767

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 241/780 (30%), Positives = 393/780 (50%), Gaps = 91/780 (11%)

Query: 359  EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            +D   WN +I  K   +  + A+  F  MQ  +  + + T   +L+ACA +       Q+
Sbjct: 16   KDTFHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQV 74

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS--SWNSMISSYTGLG 476
            H Y+ +  L ++      L+  Y +      A +VFD M + ++   SW ++IS+Y+  G
Sbjct: 75   HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNG 134

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             VD A+  F +M   R       W+    G    G     L  L    ++G   N     
Sbjct: 135  CVDEAFKAFGRMRWMR------GWD----GSECCGVDVVSLGALVSACAVGCGSN----- 179

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--K 594
                       L+ G   HG +++ G     ++G S++ MY     +  A  VF+ +  +
Sbjct: 180  ----------CLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIE 229

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE---EIKPDLVSWNSLVSGYSIWG---- 647
             R++V+WNSLISG+   G    A +    M  E    ++P+ V+  +L+   +  G    
Sbjct: 230  QRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVET 289

Query: 648  ----------------QSKEALVIIH----HMKNSGIY-----------PNVVTWTSLIS 676
                             +K+ +V+      H +   +             NVV W+++I+
Sbjct: 290  SSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIA 349

Query: 677  GSLQNENYRESLKFFIQMQQE------DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            G  Q     E+L+ F QM  E      ++KPN+ T+ S++  C  LG  ++   IH   +
Sbjct: 350  GYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAV 409

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK--SANKTLASWNCMIMGFAIYGNGKEA 788
              G  +DA +A+ LIDM +K G+++  R+VF +   + +T+ SW+ MI    I+G GK A
Sbjct: 410  ATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRA 469

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            + LF E+   G++P+ IT+ ++L+AC ++GLVE+G   F+SM  DY + PT +HY+C+VD
Sbjct: 470  LELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVD 529

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG+LDEA + I  MP K D  +WG+LL +C +HG+ +  EI  +++  L+  +  +
Sbjct: 530  LLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGH 589

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            + L+ N+   + RW+DV R+R  +   G++ +   S+I+I   V+ F AE   HP +  I
Sbjct: 590  HVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMI 649

Query: 969  YFELYHLVSEMKKLG-YVPDTRCVYQDIDEEEKGKVLLS--HTEKLAIVYGLM------- 1018
            Y EL  L   ++K   YV +T    +D D    G +L    H+E+LAI +GL+       
Sbjct: 650  YKELDGLDERVRKAAKYVTETGLNVEDGD--IAGLILRCKYHSERLAIAFGLIMIDRHST 707

Query: 1019 ---KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                 ++  PIR+ KN RVC DCH   K +S V  RE+ +RD  RFHHFR+G CSC D W
Sbjct: 708  CSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 236/550 (42%), Gaps = 100/550 (18%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C  L      ++VHA L + G   D     AL++ YGKC     A ++F E+ +  
Sbjct: 58  LLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS 117

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQ----FSSAKAISRTIVK---MLQACAKVG- 410
            D++ W  +I     N   + A K F  M+    +  ++     +V    ++ ACA VG 
Sbjct: 118 VDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACA-VGC 176

Query: 411 ---AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS--MKDHNLSSW 465
                  G  +HG V+K     +  + N ++ MYS    +  A RVF+   ++  ++ SW
Sbjct: 177 GSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSW 236

Query: 466 NSMISSYTGLGYVDVAWSLFNKM---NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
           NS+IS +T  G  + A   F  M    +S ++P+ +T                V+ LL+ 
Sbjct: 237 NSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVT----------------VIALLKS 280

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
              LG     S V             +Y    H  +L   +  D+ V T+L+DM+ +   
Sbjct: 281 CAELGCVETSSWVH------------EYISSRHSSLL---VAKDVVVLTALLDMHARCGN 325

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------EIKPDLVSW 636
           L  A+E+FD ++ +N+V W+++I+GY        A ++  QM  E      E+KP+ V+ 
Sbjct: 326 LALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTL 385

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN----------------------------- 667
            S+++  S  G S+ A +I  +   +G+  +                             
Sbjct: 386 VSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDE 445

Query: 668 ----VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               VV+W+S+I     +   + +L+ F +M+    +PN  T  S+L  C   GL++ GK
Sbjct: 446 STRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGK 505

Query: 724 EIHCLCLKNGFIKD-AYVATG-----LIDMYSKSGNLKSAREVFRKSANKT-LASWNCMI 776
              C    N   KD     TG     L+D+  ++G+L  A  V      K  LA W  ++
Sbjct: 506 S--CF---NSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLL 560

Query: 777 MGFAIYGNGK 786
               ++GN K
Sbjct: 561 AACHLHGNCK 570



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 168/387 (43%), Gaps = 24/387 (6%)

Query: 206 CLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF--FLYFSRSYADWSS 263
           CL    + H  ++K G    S  +  S++  Y    D   A + F       R    W+S
Sbjct: 180 CLRRGSAVHGLVVKYG-FGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238

Query: 264 FLEDYESFGGEVQELLEVWGEL--HGKGVIFRSRILTI-ILKLCTKLMAFWLGVEVHASL 320
            +  + +  GE +  L  + ++   G   +  +R+  I +LK C +L        VH  +
Sbjct: 239 LISGF-TLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI 297

Query: 321 IKRGFDF----DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
             R        DV +  AL++ + +C ++  A ++F  V   ++ + W+ +I    +   
Sbjct: 298 SSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEG-KNVVCWSAMIAGYEQGSC 356

Query: 377 WENAIKLFREMQFSS------AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
            E A++LFR+M           K  + T+V ++ AC+++GA      IH Y + + L+ +
Sbjct: 357 PEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQD 416

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKD--HNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
             + + LI M ++   +E   +VF  M +    + SW+SMI +    G    A  LF++M
Sbjct: 417 ARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM 476

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRL 547
            +   +P+ IT+  +LS     G  +   +    M+   G  P G   + ++  +     
Sbjct: 477 RTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGH 536

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLM 574
           L    E+H  IL   +  DL +  SL+
Sbjct: 537 LD---EAHNVILNMPIKADLALWGSLL 560


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like
            [Glycine max]
          Length = 693

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/614 (33%), Positives = 314/614 (51%), Gaps = 71/614 (11%)

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            RP+    S ++ A    R L+ GR  H +   +     +++   L+DMY K   L +AQ 
Sbjct: 84   RPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQM 143

Query: 589  VFDNMKNRNIVAW-------------------------------NSLISGYCFKGLFVNA 617
            +FD M +R++ +W                               N+ ISGY        A
Sbjct: 144  LFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREA 203

Query: 618  KKMLNQMEEEE------------------------------------IKPDLVSWNSLVS 641
             ++   M+  E                                    +  D V W++L+ 
Sbjct: 204  LELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLD 263

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             Y   G   EA  I   MK+     +VV+WT++I    ++    E    F  + Q  ++P
Sbjct: 264  LYGKCGSLDEARGIFDQMKDR----DVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRP 319

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            N  T + +L  C        GKE+H   +  G+   ++  + L+ MYSK GN + AR VF
Sbjct: 320  NEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVF 379

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             +     L SW  +I+G+A  G   EA+  F  LL++G +PD +T+  +L+AC ++GLV+
Sbjct: 380  NEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVD 439

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G +YF S+   + ++ T +HY+C++DLL ++G   EA + I  MP KPD  +W +LLG 
Sbjct: 440  KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGG 499

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CRIHG+LE A+ A++ L+++EP N A Y  + N+ A +  W +V  +R  MD +G+    
Sbjct: 500  CRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKP 559

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SWI+I + VHVF      HP T +I+  L  L  ++K+ GYVPDT  V  D++EE+K 
Sbjct: 560  GKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKE 619

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            + L+ H+EKLA+V+G++ T    PI+V KN R C DCHTA KY+S +  R+I +RD  RF
Sbjct: 620  QNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRF 679

Query: 1062 HHFREGECSCNDCW 1075
            H F +G CSC D W
Sbjct: 680  HCFEDGSCSCKDYW 693



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 198/482 (41%), Gaps = 75/482 (15%)

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
           V+E +E+   LH       +R+ + ++  C +  A  LG  VHA      F   V +   
Sbjct: 71  VKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNR 127

Query: 335 LMNFYGKC---------------RDV----------------ESANKLFSEVSDLEDDLL 363
           L++ Y KC               RD+                E A KLF E+    D+  
Sbjct: 128 LLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQ-RDNFS 186

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYV 422
           WN  I   + + +   A++LFR MQ     + ++ T+   L A A +     GK+IHGY+
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
           +++ L  +  V                               W++++  Y   G +D A 
Sbjct: 247 IRTELNLDEVV-------------------------------WSALLDLYGKCGSLDEAR 275

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            +F++M       D+++W  ++   F  G  +    L R +   G RPN  + + VL A 
Sbjct: 276 GIFDQMKDR----DVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNAC 331

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            +      G+E HGY++  G D   +  ++L+ MY K    + A+ VF+ M   ++V+W 
Sbjct: 332 ADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWT 391

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
           SLI GY   G    A      + +   KPD V++  ++S  +  G   + L   H +K  
Sbjct: 392 SLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEK 451

Query: 663 -GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
            G+      +  +I    ++  ++E+      M    +KP+    +SLL  C   G L+ 
Sbjct: 452 HGLMHTADHYACVIDLLARSGRFKEAENIIDNMP---VKPDKFLWASLLGGCRIHGNLEL 508

Query: 722 GK 723
            K
Sbjct: 509 AK 510



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 183/437 (41%), Gaps = 43/437 (9%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + G    A K F     R    W++ +  Y +   + +E LE++  +      
Sbjct: 158 TMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHN-QPREALELFRVMQRHERS 216

Query: 292 FRSRILTIILKLCTKLMA-FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
             ++         +  +    LG E+H  LI+   + D  +  AL++ YGKC  ++ A  
Sbjct: 217 SSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARG 276

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F ++ D  D + W  +I     + + E    LFR++  S  +    T   +L ACA   
Sbjct: 277 IFDQMKD-RDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHA 335

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A H GK++HGY++ +  +      + L+ MYS+     +A RVF+ M   +L SW S+I 
Sbjct: 336 AEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIV 395

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y   G  D A   F  +  S  +PD +T+                         +G   
Sbjct: 396 GYAQNGQPDEALHFFELLLQSGTKPDQVTY-------------------------VG--- 427

Query: 531 NGSSVSVVLQAVTELRLLKYGRES-HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                  VL A T   L+  G E  H    ++GL +       ++D+  ++   + A+ +
Sbjct: 428 -------VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENI 480

Query: 590 FDNMKNR-NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD-LVSWNSLVSGYSIWG 647
            DNM  + +   W SL+ G    G    AK+    +   EI+P+   ++ +L + Y+  G
Sbjct: 481 IDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKAL--YEIEPENPATYITLANIYANAG 538

Query: 648 QSKEALVIIHHMKNSGI 664
              E   +   M N GI
Sbjct: 539 LWSEVANVRKDMDNMGI 555



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 47/258 (18%)

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
           Q +  +E+++    + + D +P++   S+L+  C     L+ G+ +H     + F+   +
Sbjct: 67  QQKRVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVF 123

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
           ++  L+DMY+K G+L  A+ +F +  ++ L SWN MI+G+A  G  ++A  LF E+    
Sbjct: 124 ISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMP--- 180

Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMS---------------------------- 831
            Q D  ++ A ++         E  + F  M                             
Sbjct: 181 -QRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLG 239

Query: 832 ---------TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
                    T+ N+   +  +S ++DL GK G LDEA      M  + D   W  ++  C
Sbjct: 240 KEIHGYLIRTELNLDEVV--WSALLDLYGKCGSLDEARGIFDQMKDR-DVVSWTTMIHRC 296

Query: 883 RIHGHLEYAEIASRRLFK 900
              G  E   +  R L +
Sbjct: 297 FEDGRREEGFLLFRDLMQ 314


>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/607 (35%), Positives = 337/607 (55%), Gaps = 58/607 (9%)

Query: 513  YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
            +  V+ +   MQ  G RP+     +++++         G   H ++L+ G   D +V  +
Sbjct: 11   HAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGHGSDAFVRNA 65

Query: 573  LMDMYVKNDCLQNA--------------QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            ++DMY +     NA              Q +FD M  RN++ W ++++GY        A+
Sbjct: 66   VIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAAR 125

Query: 619  KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM----KNSGIY--------- 665
            +  + M E  +    VSWN+++SGY+  G ++EAL +   M    +NS  +         
Sbjct: 126  RYFDCMPERSV----VSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMR 181

Query: 666  ----------------PNVVTWTSLISGSLQNENYRESLKFFIQM-QQEDIKPNSTTMSS 708
                             NVVTW S+I+G  QN     +++ F +M   + + P+  TM S
Sbjct: 182  VGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 241

Query: 709  LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            ++  CG LG L+ G  +     +N           +I MYS+ G+++ A+ VF++ A + 
Sbjct: 242  VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 301

Query: 769  LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
            + S+N +I GFA +G+G EAI L   + E G +PD +TF  +L AC ++GL+EEG K F+
Sbjct: 302  VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 361

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            S+       P I+HY+CMVDLLG+ G L++A   +  MP +P A ++G+LL + RIH  +
Sbjct: 362  SIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 416

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
            E  E+A+ +LF+LEP NS N+ L+ N+ A + RW+DVER+R +M + GVK    WSW++ 
Sbjct: 417  ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 476

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
               +H F      H  + +IY  L  L  +M++ GY+ D  CV +D++EEEK +++ +H+
Sbjct: 477  GGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHS 536

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            EKLAI Y L+ +++ A IRV+KN RVC DCHTA K +S + GR I +RD  RFH F +G 
Sbjct: 537  EKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGL 596

Query: 1069 CSCNDCW 1075
            CSC D W
Sbjct: 597  CSCKDYW 603



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 129/267 (48%), Gaps = 30/267 (11%)

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           E N+     +++ Y++   LE A R FD M + ++ SWN+M+S Y   G  + A  LF++
Sbjct: 102 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDE 161

Query: 488 M-----------------------NSSR----IQP--DIITWNCLLSGHFTHGSYQNVLT 518
           M                       +S+R      P  +++TWN +++G+  +G     + 
Sbjct: 162 MLGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIE 221

Query: 519 LLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
           L + M  +    P+  ++  V+ A   L  L+ G     ++  N +   +    +++ MY
Sbjct: 222 LFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMY 281

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            +   +++A+ VF  M  R++V++N+LISG+   G  V A  +++ M+E  I+PD V++ 
Sbjct: 282 SRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 341

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGI 664
            +++  S  G  +E   +   +K+  I
Sbjct: 342 GVLTACSHAGLLEEGRKVFESIKDPAI 368



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 168/399 (42%), Gaps = 99/399 (24%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRN--------------NKLELATRVFDSMKDH 460
           G   H +VLK    S+  V N +I MY+R                    A  +FD M + 
Sbjct: 44  GIGFHAHVLKLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPER 103

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           N+ +W +M++ Y  +  ++ A   F+ M     +  +++WN +LSG+  +G  +  L L 
Sbjct: 104 NVITWTAMVTGYAKVKDLEAARRYFDCMP----ERSVVSWNAMLSGYAQNGLAEEALRLF 159

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M  LG                                RN + ++     +++  Y++ 
Sbjct: 160 DEM--LG------------------------------AYRNSVTWN-----AMISAYMRV 182

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LF---VNAKKM---------- 620
             L +A+++F+ M  RN+V WNS+I+GY   G       LF   + AKK+          
Sbjct: 183 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 242

Query: 621 ------LNQME----------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
                 L  +E          E +IK  +   N+++  YS  G  ++A  +   M     
Sbjct: 243 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-- 300

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
             +VV++ +LISG   + +  E++     M++  I+P+  T   +L  C   GLL+ G++
Sbjct: 301 --DVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK 358

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
           +    +K+  I D Y    ++D+  + G L+ A+    +
Sbjct: 359 VF-ESIKDPAI-DHYAC--MVDLLGRVGELEDAKRTMER 393



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 100/176 (56%), Gaps = 6/176 (3%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A+++ Y +  D++SA KLF+ +    + + WN +I    +N +   AI+LF+EM   +AK
Sbjct: 174 AMISAYMRVGDLDSARKLFNTMPG-RNVVTWNSMIAGYAQNGQSAMAIELFKEM--ITAK 230

Query: 394 AISR---TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
            ++    T+V ++ AC  +GA   G  +  ++ ++ ++ ++S  N +I MYSR   +E A
Sbjct: 231 KLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDA 290

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            RVF  M   ++ S+N++IS +   G+   A +L + M    I+PD +T+  +L+ 
Sbjct: 291 KRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTA 346



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 7/227 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL-HGKGV 290
           ++I  Y+  GD  SA K F     R+   W+S +  Y    G+    +E++ E+   K +
Sbjct: 174 AMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQ-NGQSAMAIELFKEMITAKKL 232

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
                 +  ++  C  L A  LG  V   L +      +    A++  Y +C  +E A +
Sbjct: 233 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 292

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F E++   D + +N +I     +     AI L   M+    +    T + +L AC+  G
Sbjct: 293 VFQEMA-TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG 351

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
              EG++    V +S  +  +    C++ +  R  +LE A R  + M
Sbjct: 352 LLEEGRK----VFESIKDPAIDHYACMVDLLGRVGELEDAKRTMERM 394


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 264/887 (29%), Positives = 431/887 (48%), Gaps = 107/887 (12%)

Query: 246  AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI--------FRSRIL 297
            A + F     R    W++ +  Y   G  V         LH    I        F S I 
Sbjct: 218  AQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLIT 277

Query: 298  TIILKLCTKLMAFWLGV--EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
               L  C+       GV  +V A ++K G   D+++  AL++ + +   ++ A  +F  +
Sbjct: 278  ATSLSSCSS------GVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINL 331

Query: 356  SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG----A 411
             +  + +  N +I+  ++    E A+ +F   +  S    + T V +L A A+       
Sbjct: 332  KE-RNAVTLNGLIVGLVKQHCSEEAVGIFMGTR-DSFVVNTDTFVVLLSAVAEFSIPEDG 389

Query: 412  FHEGKQIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
               G+++HG++L++ L +  +++ N L++MY++   ++ A+RVF  +   +  SWN++IS
Sbjct: 390  LMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIIS 449

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
                 G                               F  G+  N   + +G  S    P
Sbjct: 450  VLDQNG-------------------------------FCEGAMMNYCMMRQGCIS----P 474

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            +  +    L +   LRLL  G++ H   ++ GLD D  V  +L+ MY        + E+F
Sbjct: 475  SNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIF 534

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAK-------KMLNQMEEEEIKPDLVSWNSLVSGY 643
            ++M   +IV+WNS++      G+ V++        ++ + M    + P+ V++ +L+S  
Sbjct: 535  NSMAEHDIVSWNSIM------GVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSAL 588

Query: 644  SIW-----GQSKEALVIIHHMKNSGIYPNV---------------------------VTW 671
            S       G+   A+V+ H         N                            V+W
Sbjct: 589  SPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSW 648

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             S+ISG + N + +E++     M   +   +  T S +L  C  +  L+ G E+H   ++
Sbjct: 649  NSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIR 708

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            +    D  V + L+DMYSK G +  A +VF   + K   SWN MI G+A +G G++A+ +
Sbjct: 709  SQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEI 768

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F E+   G  PD +TF ++L+AC ++GLV+ G  YF+ M  D+ I+P IEHYSC++DLLG
Sbjct: 769  FEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMME-DHGILPHIEHYSCVIDLLG 827

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH---GHLEYAEIASRRLFKLEPCNSAN 908
            +AG L +  ++I  MP KP+  IW  +L +CR       ++  + ASR L +LEP N  N
Sbjct: 828  RAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVN 887

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            Y L  N  A + RWED  + R +M    +K     SW+ +   VH F A    HP T EI
Sbjct: 888  YVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEI 947

Query: 969  YFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
            Y +L  L+ ++K  GYVP T     D++EE K ++L  H+EKLA+ + L ++ S  PIR+
Sbjct: 948  YEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRI 1007

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +KN RVC DCHTA +Y+S +  R+I LRD  RFHHF +G+CSC D W
Sbjct: 1008 MKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 155/628 (24%), Positives = 276/628 (43%), Gaps = 95/628 (15%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            +H  L+KRG   D+ L   L+N Y K   + +A ++F  + +  + + W  ++   + +
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLE-RNAVSWTCLVSGYVLS 135

Query: 375 EKWENAIKLFREMQFSS---AKAISRTIVKMLQACAKVG----AFHEGKQIHGYVLKSAL 427
              + A ++F+ M +     ++    T   +L+AC   G    AF    Q+HG V K+  
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAF--AVQVHGLVSKTIY 193

Query: 428 ESNLSVCNCLISMYSRNNKLEL---ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
            SN +VCN LISMY  N  + L   A +VFD+    +L +WN+++S Y   GYV   ++L
Sbjct: 194 ASNTTVCNALISMYG-NCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTL 252

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           F                               + +L    ++  RPN  +   ++ A T 
Sbjct: 253 F-------------------------------MAMLHDDSAIELRPNEHTFGSLITA-TS 280

Query: 545 LRLLKYG--RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
           L     G   +    +L++G   DLYVG++L+  + ++  L  A+++F N+K RN V  N
Sbjct: 281 LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLN 340

Query: 603 SLISG----YCFK---GLFVNAKK-----------MLNQMEEEEIKPD------------ 632
            LI G    +C +   G+F+  +            +L+ + E  I  D            
Sbjct: 341 GLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHI 400

Query: 633 ---------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
                    +   N LV+ Y+  G   +A  +   +       + V+W ++IS   QN  
Sbjct: 401 LRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLL----CARDRVSWNTIISVLDQNGF 456

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              ++  +  M+Q  I P++    S L +C  L LL  G+++HC  +K G   D  V+  
Sbjct: 457 CEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNA 516

Query: 744 LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI--YGNGKEAILLFHELLETGFQ 801
           L+ MY   G    + E+F   A   + SWN  IMG  +  +    E++ +F  ++ +G  
Sbjct: 517 LVKMYGDCGARSESWEIFNSMAEHDIVSWNS-IMGVMVSSHAPTAESVEVFSNMMRSGLT 575

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
           P+ +TF  LL+A     ++E G K   ++   +  I      + ++    K+G +D    
Sbjct: 576 PNKVTFVNLLSALSPLSVLELG-KQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQ 634

Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLE 889
              +M  + DA  W +++     +GHL+
Sbjct: 635 LFSSMSGRRDAVSWNSMISGYIYNGHLQ 662



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 157/343 (45%), Gaps = 1/343 (0%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRS 257
           L+     R L++ +  H   +K G   ++  +  +L+  Y + G  + + + F       
Sbjct: 483 LSSCASLRLLTAGQQVHCDAVKWGLDLDTS-VSNALVKMYGDCGARSESWEIFNSMAEHD 541

Query: 258 YADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
              W+S +    S      E +EV+  +   G+         +L   + L    LG +VH
Sbjct: 542 IVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVH 601

Query: 318 ASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
           A ++K G   D  +  ALM+ Y K  D++S  +LFS +S   D + WN +I   + N   
Sbjct: 602 AVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHL 661

Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           +  +     M  S+      T   +L ACA V A   G ++H + ++S LES++ V + L
Sbjct: 662 QETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESAL 721

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           + MYS+  +++ A++VF+SM   N  SWNSMIS Y   G  + A  +F +M  +   PD 
Sbjct: 722 LDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDH 781

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
           +T+  +LS     G     L     M+  G  P+    S V+ 
Sbjct: 782 VTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVID 824



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 127/533 (23%), Positives = 223/533 (41%), Gaps = 103/533 (19%)

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +++H  ++K  L  +L + N L+++Y++ ++L  A +VFD M + N  SW  ++S Y   
Sbjct: 76  ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135

Query: 476 GYVDVAWSLFNKM-----NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
           G  D A+ +F  M       SR  P            FT GS      +LR  Q  G  P
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTP------------FTFGS------VLRACQDAG--P 175

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC-----LQN 585
           +               LL +  + HG + +     +  V  +L+ MY   +C     LQ 
Sbjct: 176 D---------------LLAFAVQVHGLVSKTIYASNTTVCNALISMY--GNCSVGLPLQ- 217

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA----KKMLNQMEEEEIKP---------- 631
           AQ+VFD    R+++ WN+L+S Y  KG  V+       ML+     E++P          
Sbjct: 218 AQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLIT 277

Query: 632 --------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
                                     DL   ++LVS ++  G   EA  I  ++K     
Sbjct: 278 ATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKER--- 334

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL----LQN 721
            N VT   LI G ++     E++  F+   ++    N+ T   LL       +    L  
Sbjct: 335 -NAVTLNGLIVGLVKQHCSEEAVGIFMG-TRDSFVVNTDTFVVLLSAVAEFSIPEDGLMR 392

Query: 722 GKEIHCLCLKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
           G+E+H   L+ G I     ++ GL++MY+K G +  A  VFR    +   SWN +I    
Sbjct: 393 GREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLD 452

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPT 839
             G  + A++ +  + +    P      + L++C +  L+  G + + D++    ++  +
Sbjct: 453 QNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTS 512

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
           + +   +V + G  G   E+W+   +M  + D   W +++G   +  H   AE
Sbjct: 513 VSN--ALVKMYGDCGARSESWEIFNSMA-EHDIVSWNSIMG-VMVSSHAPTAE 561



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)

Query: 714 GGLGLLQNGKE-----IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
            GL L + G+E     +H   +K G   D +++  L+++Y+K   L +AR+VF     + 
Sbjct: 62  AGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERN 121

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQ---PDAITFTALLAACKNSG 818
             SW C++ G+ + G   EA  +F  +L  G +   P   TF ++L AC+++G
Sbjct: 122 AVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAG 174


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/799 (29%), Positives = 402/799 (50%), Gaps = 88/799 (11%)

Query: 322  KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
            K GF  D+++  AL++ + K   +  A  +F ++S   + +  N +I+  +R ++ E A+
Sbjct: 312  KSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMS-YRNVVSLNGLIIGLVRQKRGEEAV 370

Query: 382  KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK----QIHGYVLKSAL-ESNLSVCNC 436
            +LF EM+  S +    + + +L A  +      GK    ++H ++++S L  + +++ N 
Sbjct: 371  ELFMEMK-DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNG 429

Query: 437  LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
            LI+MY++   +  A  VF  M +                                    D
Sbjct: 430  LINMYAKCGAINDACVVFRLMDNK-----------------------------------D 454

Query: 497  IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
             +TWN +++G   +  +   +   + M+     P+  ++   L +   L  +  G + H 
Sbjct: 455  SVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHC 514

Query: 557  YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
              L+ GLD D+ V  +L+ +Y +   ++  Q+ F  M + + V+WNSLI       L  +
Sbjct: 515  EGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGA-----LADS 569

Query: 617  AKKMLNQMEEEEI------KPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMKNSGIY 665
               ML  +E   +       P+ V++ ++++  S       G+   ALV+  ++      
Sbjct: 570  EPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAI 629

Query: 666  PNV---------------------------VTWTSLISGSLQNENYRESLKFFIQMQQED 698
             N                            V+W S+ISG + NE   +++     M Q+ 
Sbjct: 630  ENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKG 689

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
             + +  T +++L  C  +  L+ G E+H   ++     D  + + L+DMY+K G +  A 
Sbjct: 690  QRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYAS 749

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
              F     + L SWN MI G+A +G+G +++ LF ++   G  PD +TF  +L+AC ++G
Sbjct: 750  RFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAG 809

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            LV EG+ +FDSMS  Y + P +EH+SCMVDLLG+ G L++  DF+  MP KP+  IW  +
Sbjct: 810  LVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTV 869

Query: 879  LGS-CRIHG-HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            LG+ CR +G +      A+  L ++EP N+ NY L+ N+ A   +W+DV + R +M +  
Sbjct: 870  LGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAF 929

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            VK     SW+ +   VHVF A    HP    IY +L  L  +M+  GY+P+TR    D++
Sbjct: 930  VKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLE 989

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
             E K ++L  H+EK+A+ + L +  S+ PIR++KN RVC DCH+A KY+S +  R+I LR
Sbjct: 990  GESKEELLSYHSEKIAVAFVLTR-PSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLR 1048

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFHHF  G+CSC D W
Sbjct: 1049 DSNRFHHFENGKCSCGDFW 1067



 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 178/692 (25%), Positives = 286/692 (41%), Gaps = 129/692 (18%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           E+H  L K GF  D+ L   L+N Y +  D+ S  K+F E+  L + + W+ +I    RN
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMP-LRNLVSWSCLISGYTRN 152

Query: 375 EKWENAIKLFREM---QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
                A +LFR+M    F        ++++  Q C + G    G QIHG + K+   +++
Sbjct: 153 RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYG-LKFGMQIHGLMSKTQYVNDV 211

Query: 432 SVCNCLISMYSRN-NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN- 489
           +  N LISMY      ++ A R FDS+   NL S NSMIS Y   G    A+ +F+ M  
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQK 271

Query: 490 ---SSRIQPDIITWNCLLSGH--------------------------------------- 507
                 ++P+  T+  L+S                                         
Sbjct: 272 EVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAK 331

Query: 508 ----------FTHGSYQNVLTL----------LRGMQ----------SLGFRPNGSSVSV 537
                     F   SY+NV++L           RG +          S+   PN  S  +
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SYMI 389

Query: 538 VLQAVTELRLLKYGR----ESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
           +L A  E  +L+ G+    E H +++R+G L+  + +G  L++MY K   + +A  VF  
Sbjct: 390 ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRL 449

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--------------------- 631
           M N++ V WNS+I+G      F+ A K   +M   E+ P                     
Sbjct: 450 MDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509

Query: 632 --------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                         D+   N+L++ Y   G  KE       M +     + V+W SLI  
Sbjct: 510 EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDY----DHVSWNSLIGA 565

Query: 678 SLQNE-NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
              +E +  E+++ F+ M +    PN  T  ++L     L L + GK+IH L LK     
Sbjct: 566 LADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAA 625

Query: 737 DAYVATGLIDMYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           D  +   L+  Y K G++     +F R S  +   SWN MI G+       +A+ +   +
Sbjct: 626 DTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFM 685

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           ++ G + D  TF  +L+AC     +E G +     S    +   I   S +VD+  K G 
Sbjct: 686 MQKGQRLDGFTFATVLSACATVATLERGME-VHGCSVRACLESDIVIGSALVDMYAKCGR 744

Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           +D A  F   MP + +   W +++     HGH
Sbjct: 745 IDYASRFFEMMPAR-NLYSWNSMISGYARHGH 775



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 228/513 (44%), Gaps = 83/513 (16%)

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           + +++H  + K+   ++L +CN LI++Y+R   L    +VFD M   NL SW+ +IS YT
Sbjct: 91  DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYT 150

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                + A  LF KM S    P+          H+  GS      ++R  Q  G      
Sbjct: 151 RNRMPNEACELFRKMVSDGFMPN----------HYAFGS------VIRACQECGEYG--- 191

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN-DCLQNAQEVFDN 592
                         LK+G + HG + +     D+     L+ MY      +  A+  FD+
Sbjct: 192 --------------LKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDS 237

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE----EIKPDLVSWNSLVSGYSIWGQ 648
           +  RN+V+ NS+IS YC +G  V+A  + + M++E     +KP+  ++ SL+S       
Sbjct: 238 IWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLAN 297

Query: 649 SKEALV--IIHHMKNSGI-------------------------------YPNVVTWTSLI 675
           S   L+  ++  ++ SG                                Y NVV+   LI
Sbjct: 298 SGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLI 357

Query: 676 SGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGK----EIHCLCL 730
            G ++ +   E+++ F++M+   ++ PNS  +  +L       +L+NGK    E+H   +
Sbjct: 358 IGLVRQKRGEEAVELFMEMKDSVELNPNSYMI--ILTAFPEFHVLENGKRKGSEVHAFLI 415

Query: 731 KNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
           ++G +     +  GLI+MY+K G +  A  VFR   NK   +WN MI G        EA+
Sbjct: 416 RSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAV 475

Query: 790 LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTIEHYSCMVD 848
             F E+  T   P   T  + L++C + G +  G + + + +    ++  ++ +   ++ 
Sbjct: 476 KTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSN--ALLA 533

Query: 849 LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
           L G+ GY+ E       M    D   W +L+G+
Sbjct: 534 LYGECGYVKECQKAFSLM-LDYDHVSWNSLIGA 565



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 159/354 (44%), Gaps = 12/354 (3%)

Query: 153 TSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKS 212
           T ++QN+   +            L P++     A  SC S G+  + E            
Sbjct: 463 TGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGE-----------Q 511

Query: 213 KHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
            H + +K+G   +   +  +L+  Y E G      KAF L     +  W+S +       
Sbjct: 512 LHCEGLKLGLDLDVS-VSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSE 570

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             + E +E +  +   G          IL   + L    LG ++HA ++KR    D  ++
Sbjct: 571 PSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIE 630

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL+  YGKC D+     +FS +SD +D++ WN +I   + NE    A+ +   M     
Sbjct: 631 NALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQ 690

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +    T   +L ACA V     G ++HG  +++ LES++ + + L+ MY++  +++ A+R
Sbjct: 691 RLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASR 750

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            F+ M   NL SWNSMIS Y   G+   +  LF +M      PD +T+  +LS 
Sbjct: 751 FFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSA 804



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 179/378 (47%), Gaps = 52/378 (13%)

Query: 549 KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
           K   E H  + +NG   DL++  +L+++Y +   L + ++VFD M  RN+V+W+ LISGY
Sbjct: 90  KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------------GYSIWG-QSK----- 650
               +   A ++  +M  +   P+  ++ S++             G  I G  SK     
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209

Query: 651 -------------EALVIIHHMKNS--GIYP-NVVTWTSLISGSLQNENYRESLKFFIQM 694
                         AL ++ + + +   I+P N+V+  S+IS   Q  +   +   F  M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269

Query: 695 QQE----DIKPNSTTMSSLLQ-TC----GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           Q+E     +KPN  T  SL+  TC     GL LL+   ++     K+GF+ D YV + L+
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLE---QLLTRVEKSGFLHDLYVGSALV 326

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
             ++K+G++  A+ +F+K + + + S N +I+G      G+EA+ LF E+ ++  + +  
Sbjct: 327 SGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNPN 385

Query: 806 TFTALLAACKNSGLVEEGWKYFDSMST----DYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
           ++  +L A     ++E G +    +         +   I   + ++++  K G +++A  
Sbjct: 386 SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACV 445

Query: 862 FIRTMPFKPDATIWGALL 879
             R M  K D+  W +++
Sbjct: 446 VFRLMDNK-DSVTWNSMI 462



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 18/279 (6%)

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
           +A+++  Q+ +     DL   N+L++ Y+  G       +   M       N+V+W+ LI
Sbjct: 91  DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMP----LRNLVSWSCLI 146

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL---QTCGGLGLLQNGKEIHCLCLKN 732
           SG  +N    E+ + F +M  +   PN     S++   Q CG  G L+ G +IH L  K 
Sbjct: 147 SGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYG-LKFGMQIHGLMSKT 205

Query: 733 GFIKDAYVATGLIDMYSKS-GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            ++ D   +  LI MY  + G +  AR  F     + L S N MI  +   G+   A  +
Sbjct: 206 QYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDI 265

Query: 792 F----HELLETGFQPDAITFTALLAAC---KNSGLVEEGWKYFDSMSTDYNIIPTIEHYS 844
           F     E++  G +P+  TF +L++A     NSGLV    +   +       +  +   S
Sbjct: 266 FSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVL--LEQLLTRVEKSGFLHDLYVGS 323

Query: 845 CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
            +V    KAG +  A +  + M ++   ++ G ++G  R
Sbjct: 324 ALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVR 362



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 6/115 (5%)

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
           +CG     ++ +E+H    KNGF+ D ++   LI++Y++ G+L S R+VF +   + L S
Sbjct: 86  SCGS----KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVS 141

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
           W+C+I G+       EA  LF +++  GF P+   F +++ AC+  G  E G K+
Sbjct: 142 WSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG--EYGLKF 194


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 565

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/649 (35%), Positives = 319/649 (49%), Gaps = 106/649 (16%)

Query: 428  ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
            + N    N LI+ Y R   L  A +VFD M D  L++WN+MI+      Y +   SLF +
Sbjct: 22   KKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFRE 81

Query: 488  MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            M                     HG              LGF P+  ++  V      LR 
Sbjct: 82   M---------------------HG--------------LGFSPDEYTLGSVFSGSAGLRS 106

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            +  G++ HGY ++ GL+ DL V +SL  MY++N  LQ+ + V  +M  RN+VAWN+LI G
Sbjct: 107  VSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 166

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                    NA+                            G  +  L +   MK SG  PN
Sbjct: 167  --------NAQN---------------------------GCPETVLYLYKMMKISGCRPN 191

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
             +T+ +++S                                   +C  L +   G++IH 
Sbjct: 192  KITFVTVLS-----------------------------------SCSDLAIRGQGQQIHA 216

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
              +K G      V + LI MYSK G L  A + F +  ++    W+ MI  +  +G G E
Sbjct: 217  EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDE 276

Query: 788  AILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
            AI LF+ + E T  + + + F  LL AC +SGL ++G + FD M   Y   P ++HY+C+
Sbjct: 277  AIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 336

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VDLLG+AG LD+A   I++MP KPD  IW  LL +C IH + E A+   + + +++P +S
Sbjct: 337  VDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDS 396

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
            A Y L+ N+ A + RW DV  +R SM +  VK     SW +    VH F         + 
Sbjct: 397  ACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSK 456

Query: 967  EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
            EIY  L  L  EMK  GY PDT  V  D+DEEEK   L+ H+EKLA+ + LM     API
Sbjct: 457  EIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPI 516

Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            R+IKN RVCSDCH A KY+S++  REI LRDG+RFHHF  G+CSC D W
Sbjct: 517  RIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 45/383 (11%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L+N Y +  D+ SA K+F E+ D      WN +I   ++ E  E  + LFREM       
Sbjct: 31  LINGYVRAGDLVSARKVFDEMPD-RKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSP 89

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T+  +    A + +   G+QIHGY +K  LE +L V + L  MY RN KL+    V 
Sbjct: 90  DEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            SM   NL +WN++I      G  +    L+  M  S  +P+ IT+              
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF-------------- 195

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                                  VL + ++L +   G++ H   ++ G    + V +SL+
Sbjct: 196 ---------------------VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 234

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDL 633
            MY K  CL +A + F   ++ + V W+S+IS Y F G    A K+ N M E+ E++ + 
Sbjct: 235 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNE 294

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLIS--GSLQNENYRESLKF 690
           V++ +L+   S  G   + L +   M +  G  P +  +T ++   G     +  E++  
Sbjct: 295 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAI-- 352

Query: 691 FIQMQQEDIKPNSTTMSSLLQTC 713
              ++   IKP+     +LL  C
Sbjct: 353 ---IKSMPIKPDPVIWKTLLSAC 372



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 164/380 (43%), Gaps = 44/380 (11%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y+  GD  SA K F     R    W++ +     F    +E L ++ E+HG G   
Sbjct: 31  LINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYN-EEGLSLFREMHGLGFSP 89

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY---GKCRDVESAN 349
               L  +      L +  +G ++H   IK G + D+ +  +L + Y   GK +D E   
Sbjct: 90  DEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGE--- 146

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            +      + + + WN +IM   +N   E  + L++ M+ S  +    T V +L +C+ +
Sbjct: 147 -IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 205

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
               +G+QIH   +K    S ++V + LISMYS+   L  A + F   +D +   W+SMI
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 265

Query: 470 SSYTGLGYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           S+Y   G  D A  LFN M   + ++ + + +                L LL      G 
Sbjct: 266 SAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAF----------------LNLLYACSHSGL 309

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           +  G            L L     E +G+  + GL +     T ++D+  +  CL  A+ 
Sbjct: 310 KDKG------------LELFDMMVEKYGF--KPGLKH----YTCVVDLLGRAGCLDQAEA 351

Query: 589 VFDNMKNR-NIVAWNSLISG 607
           +  +M  + + V W +L+S 
Sbjct: 352 IIKSMPIKPDPVIWKTLLSA 371


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/640 (33%), Positives = 338/640 (52%), Gaps = 79/640 (12%)

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
            + GL Y   A S+F  +     +P+++ WN +  GH       + L L   M SLG  PN
Sbjct: 38   FDGLPY---AISVFETIQ----EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 90

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              +   +L++  + +  K G++ HG++L+ G D DLYV TSL+ MYV+N  L++A +VFD
Sbjct: 91   SYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 150

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ---------------------------- 623
               +R++V++ +LI GY  +G   NA+KM ++                            
Sbjct: 151  ESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALEL 210

Query: 624  ---MEEEEIKPD----------------------LVSW-------------NSLVSGYSI 645
               M +  ++PD                      + SW             N+L+  YS 
Sbjct: 211  FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSK 270

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G+ + A  +   +     Y +V++W +LI G      Y+E+L  F +M +    PN  T
Sbjct: 271  CGELETACGLFEGLP----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 326

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            M S+L  C  LG +  G+ IH    K   G    + + T LIDMY+K G++++A +VF  
Sbjct: 327  MLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNS 386

Query: 764  SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +K+L+SWN MI GFA++G    +  +F  + + G +PD ITF  LL+AC +SG+++ G
Sbjct: 387  ILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 446

Query: 824  WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
               F SM+ DY + P +EHY CM+DLLG +G   EA + I TM  +PD  IW +LL +C+
Sbjct: 447  RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 506

Query: 884  IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
            +HG++E  E  ++ L K+EP N  +Y L+ N+ A + RW +V   R  +++ G+K V   
Sbjct: 507  MHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGC 566

Query: 944  SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
            S I+ID +VH F      HP   EIY  L  +   +++ G+VPDT  V Q+++EE K   
Sbjct: 567  SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 626

Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            L  H+EKLAI +GL+ TK    + ++KN RVC +CH A K
Sbjct: 627  LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 131/556 (23%), Positives = 250/556 (44%), Gaps = 78/556 (14%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLI-FHYL--EFGDFTSAAKAFFLYFSRSYADW 261
           + L S++  HAQMIK G + N++  +  LI F  L   F     A   F      +   W
Sbjct: 1   QILQSLRMIHAQMIKTG-LHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIW 59

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           ++    + +   +    L+++  +   G++  S     +LK C K  AF  G ++H  ++
Sbjct: 60  NTMFRGH-ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 118

Query: 322 KRGFDFDVHLKCALMNFY---GKCRD----------------------------VESANK 350
           K G D D+++  +L++ Y   G+  D                            +E+A K
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQK 178

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +F E+  ++D + WN +I        ++ A++LF++M  ++ +    T+V ++ ACA+ G
Sbjct: 179 MFDEIP-VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 237

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           +   G+Q+H ++      SNL + N LI +YS+  +LE A  +F+ +   ++ SWN++I 
Sbjct: 238 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIG 297

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            YT +     A  LF +M  S                                   G  P
Sbjct: 298 GYTHMNLYKEALLLFQEMLRS-----------------------------------GETP 322

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILR--NGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           N  ++  +L A   L  +  GR  H YI +   G+     + TSL+DMY K   ++ A +
Sbjct: 323 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQ 382

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VF+++ ++++ +WN++I G+   G    +  + ++M +  I+PD +++  L+S  S  G 
Sbjct: 383 VFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 442

Query: 649 SKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                 I   M ++  + P +  +  +I     +  ++E+ +    M+ E   P+     
Sbjct: 443 LDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME---PDGVIWC 499

Query: 708 SLLQTCGGLGLLQNGK 723
           SLL+ C   G ++ G+
Sbjct: 500 SLLKACKMHGNVELGE 515


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 239/778 (30%), Positives = 390/778 (50%), Gaps = 87/778 (11%)

Query: 359  EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
            +D   WN +I  K   +  + A+  F  MQ  +  + + T   +L+ACA +       Q+
Sbjct: 16   KDTFHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQV 74

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS--SWNSMISSYTGLG 476
            H Y+ +  L ++      L+  Y +      A +VFD M + ++   SW ++IS+Y+  G
Sbjct: 75   HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNG 134

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             VD A+  F +M   R       W+    G    G     L  L    ++G   N     
Sbjct: 135  CVDEAFXAFGRMRWMR------GWD----GSECCGVDVVSLGALVSACAVGCGSN----- 179

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--K 594
                       L+ G   HG +++ G     ++G S++ MY     +  A  VF+ +  +
Sbjct: 180  ----------CLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIE 229

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE---EIKPDLVSWNSLVSGYSIWG---- 647
             R++V+WNSLISG+   G    A +    M  E    ++P+ V+  +L+   +  G    
Sbjct: 230  QRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVET 289

Query: 648  ----------------QSKEALVIIH----HMKNSGIY-----------PNVVTWTSLIS 676
                             +K+ +V+      H +   +             NVV W+++I+
Sbjct: 290  SSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIA 349

Query: 677  GSLQNENYRESLKFFIQMQQE------DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
            G  Q     E+L+ F QM  E      ++KPN+ T+ S++  C  LG  ++   IH   +
Sbjct: 350  GYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAV 409

Query: 731  KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK--SANKTLASWNCMIMGFAIYGNGKEA 788
              G  +DA +A+ LIDM +K G+++  R+VF +   + +T+ SW+ MI    I+G GK A
Sbjct: 410  ATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRA 469

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            + LF E+   G++P+ IT+ ++L+AC ++GLVE+G   F+SM  DY + PT +HY+C+VD
Sbjct: 470  LELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVD 529

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG+AG+LDEA + I  MP K D  +WG+LL +C +HG+ +  EI  +++  L+  +  +
Sbjct: 530  LLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGH 589

Query: 909  YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEI 968
            + L+ N+   + RW+DV R+R  +   G++ +   S+I+I   V+ F AE   HP +  I
Sbjct: 590  HVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMI 649

Query: 969  YFELYHLVSEMKKLG-YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM--------- 1018
            Y EL  L   ++K   YV +T    +D D          H+E+LAI +GL+         
Sbjct: 650  YKELDGLDERVRKAAKYVTETGLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCS 709

Query: 1019 -KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               ++  PIR+ KN RVC DCH   K +S V  RE+ +RD  RFHHFR+G CSC D W
Sbjct: 710  CSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 234/550 (42%), Gaps = 100/550 (18%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +LK C  L      ++VHA L + G   D     AL++ YGKC     A ++F E+ +  
Sbjct: 58  LLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGS 117

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQ----FSSAKAISRTIVK---MLQACAKVG- 410
            D++ W  +I     N   + A   F  M+    +  ++     +V    ++ ACA VG 
Sbjct: 118 VDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACA-VGC 176

Query: 411 ---AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS--MKDHNLSSW 465
                  G  +HG V+K     +  + N ++ MYS    +  A RVF+   ++  ++ SW
Sbjct: 177 GSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSW 236

Query: 466 NSMISSYTGLGYVDVAWSLFNKM---NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
           NS+IS +   G  + A   F  M    +S ++P+ +T                V+ LL+ 
Sbjct: 237 NSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVT----------------VIALLKS 280

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
              LG     S V             +Y    H  +L   +  D+ V T+L+DM+ +   
Sbjct: 281 CAELGCVETSSWVH------------EYISSRHSSLL---VAKDVVVLTALLDMHARCGN 325

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------EIKPDLVSW 636
           L  A+E+FD ++ +N+V W+++I+GY        A ++  QM  E      E+KP+ V+ 
Sbjct: 326 LALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTL 385

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSGIYPN----------------------------- 667
            S+++  S  G S+ A +I  +   +G+  +                             
Sbjct: 386 VSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDE 445

Query: 668 ----VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               VV+W+S+I     +   + +L+ F +M+    +PN  T  S+L  C   GL++ GK
Sbjct: 446 STRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGK 505

Query: 724 EIHCLCLKNGFIKD-AYVATG-----LIDMYSKSGNLKSAREVFRKSANKT-LASWNCMI 776
              C    N   KD     TG     L+D+  ++G+L  A  V      K  LA W  ++
Sbjct: 506 S--CF---NSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLL 560

Query: 777 MGFAIYGNGK 786
               ++GN K
Sbjct: 561 AACHLHGNCK 570



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 167/387 (43%), Gaps = 24/387 (6%)

Query: 206 CLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF--FLYFSRSYADWSS 263
           CL    + H  ++K G    S  +  S++  Y    D   A + F       R    W+S
Sbjct: 180 CLRRGSAVHGLVVKYG-FGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238

Query: 264 FLEDYESFGGEVQELLEVWGEL--HGKGVIFRSRILTI-ILKLCTKLMAFWLGVEVHASL 320
            +  +    GE +  L  + ++   G   +  +R+  I +LK C +L        VH  +
Sbjct: 239 LISGF-XLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI 297

Query: 321 IKRGFDF----DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
             R        DV +  AL++ + +C ++  A ++F  V   ++ + W+ +I    +   
Sbjct: 298 SSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEG-KNVVCWSAMIAGYEQGSC 356

Query: 377 WENAIKLFREMQFSS------AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
            E A++LFR+M           K  + T+V ++ AC+++GA      IH Y + + L+ +
Sbjct: 357 PEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQD 416

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKD--HNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
             + + LI M ++   +E   +VF  M +    + SW+SMI +    G    A  LF++M
Sbjct: 417 ARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM 476

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRL 547
            +   +P+ IT+  +LS     G  +   +    M+   G  P G   + ++  +     
Sbjct: 477 RTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGH 536

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLM 574
           L    E+H  IL   +  DL +  SL+
Sbjct: 537 LD---EAHNVILNMPIKADLALWGSLL 560


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 242/894 (27%), Positives = 410/894 (45%), Gaps = 98/894 (10%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
             L+F Y  FG+   A + F    S +   +++ +  Y +  G+  E L++      K   
Sbjct: 103  DLVFMYAAFGNPGEARRIFDGLGSHNVLSFTAIMRAYVT-AGDPDEALKILHLARLKAFK 161

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +L + ++         LG   H ++ + G+D D  +  +L+  Y  C ++E+A + 
Sbjct: 162  ADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQA 221

Query: 352  FSEV---SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            F      +   D + W +I+     +  +  A+ LF  M+           V +L +   
Sbjct: 222  FDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIG 281

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
            +G   +GK+IH  VL   LE +  V   ++ MY+R   ++ A R FD +           
Sbjct: 282  LGDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRID---------- 331

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                                     QP +  W  L+  +   GS+ +V+ +L  M++ G 
Sbjct: 332  -------------------------QPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGV 366

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYI---LRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            +PN  +   +L     L  L+ G++         +  LD    +GT+++ M+ +   +  
Sbjct: 367  KPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMIL 425

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK--------------- 630
            A+E FD +  +++ A+ ++I+GY        A  +  +M    +                
Sbjct: 426  AREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACAS 485

Query: 631  -PDL-------------------VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
             PDL                   V   +LV  YS  G  ++A  +   ++     P+ V 
Sbjct: 486  IPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIER----PDTVA 541

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLC 729
            W+++I+   ++ + R ++    +MQQ+  +P+  TM  +L  C   G+++   +++H L 
Sbjct: 542  WSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLL 601

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF---AIYGNGK 786
            +  GF  D  V   ++ MY+K G+++ A   F K  N  + +W  M+  +     Y    
Sbjct: 602  VDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASD 661

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
             A+ L   + + G  PD +TF  +L AC   G ++E  +YF  M  DY ++P +EHY  +
Sbjct: 662  RALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVAL 721

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL----EYAEIASRRLFKLE 902
            VD + + GYL EA D IR +P + +  IW ALL  C+            EI  +   KL+
Sbjct: 722  VDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLD 781

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P  +  + +       + RWE+ +R+R  M + G+K     S I I   VH F A    H
Sbjct: 782  PLGTGAHRV-------AARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSH 834

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P T EIY E+  + + +KK GY+PDTR V  D+ E++K ++L  H+E+LA+ YG M T  
Sbjct: 835  PHTREIYAEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPP 894

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF-REGECSCNDCW 1075
              P+RVIKN RVC DCHTA+K  + V  REI +RD  RFHHF ++G CSC D W
Sbjct: 895  GQPLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/650 (22%), Positives = 273/650 (42%), Gaps = 67/650 (10%)

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
           +S G + +EL E    +  +   F       +L+LCT+L A   G  VH  + +   + +
Sbjct: 38  KSRGEDFRELQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAE 97

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
             +   L+  Y    +   A ++F  +    + L +  I+   +     + A+K+    +
Sbjct: 98  RFVGNDLVFMYAAFGNPGEARRIFDGLGS-HNVLSFTAIMRAYVTAGDPDEALKILHLAR 156

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
             + KA    +   ++A         G+  H  + +   + +  V   LI MYS   ++E
Sbjct: 157 LKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIE 216

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A + FD                             F +  SS    D+++W  +L+   
Sbjct: 217 AAVQAFDRA---------------------------FLRAPSS----DVVSWTKILAACN 245

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            H  Y   L L   M+  G  P+      VL +V  L  +  G+  H  +L   L+ D  
Sbjct: 246 EHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSM 305

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           VGT+++ MY +   +Q+A   FD +    + AW  L+  YC  G F +  ++L +ME E 
Sbjct: 306 VGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEG 365

Query: 629 IKPDLVSWNSLV---------SGYSIWGQSKE------------------------ALVI 655
           +KP+ V++ +++          G  I   + E                        ++++
Sbjct: 366 VKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMIL 425

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                +     +V  +T++I+G   N+  RE+L  F +M +  +  ++  ++  +  C  
Sbjct: 426 AREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACAS 485

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
           +  L+ GK +HC  +  G  +D  V T L+DMYS+ G+++ A  VF +       +W+ M
Sbjct: 486 IPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAM 545

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
           I     +G+ + A+ +   + + G++P   T   +LAAC ++G++EE  +   S+  D  
Sbjct: 546 IAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGG 605

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS-CRI 884
                E    ++ +  K G + EA +    +   PD   W  +L + CR+
Sbjct: 606 FDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCRL 654



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/523 (21%), Positives = 225/523 (43%), Gaps = 76/523 (14%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ C ++ A  EG ++H ++ +S +E+   V N L+ MY+       A R+FD +  HN
Sbjct: 69  VLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHN 128

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           + S+ +++ +Y                                    T G     L +L 
Sbjct: 129 VLSFTAIMRAYV-----------------------------------TAGDPDEALKILH 153

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             +   F+ + S +++ ++A    R L  GR  H  I R G D D  V  SL+ MY    
Sbjct: 154 LARLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCG 213

Query: 582 CLQNAQEVFD----NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            ++ A + FD       + ++V+W  +++       ++ A  + ++M E+ + PD + + 
Sbjct: 214 EIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFV 273

Query: 638 SLVS-----GYSIWGQSKEALVIIHHMKNSGIY--------------------------P 666
           +++      G    G+   ++V+   ++   +                           P
Sbjct: 274 TVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQP 333

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            V  WT L+    +  ++   ++   +M+ E +KPN  T  ++L TC  L  L++GK+I 
Sbjct: 334 GVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLA-LEDGKKIQ 392

Query: 727 CLC---LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            L     +      A + T +I M+S+  ++  ARE F K + K++A++  MI G+A   
Sbjct: 393 ALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNK 452

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
             +EA+ +F E++      D +     ++AC +   +EEG K     + D  +       
Sbjct: 453 QPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEG-KALHCSAMDLGLHRDDVVR 511

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           + +VD+  + G +++A      +  +PD   W A++ +   HG
Sbjct: 512 TALVDMYSRCGSMEDASAVFGEIE-RPDTVAWSAMIAALGRHG 553



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 10/212 (4%)

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
           + E++RE  +F   +   D   +  +   +LQ C  L  +  G  +H    ++    + +
Sbjct: 40  RGEDFRELQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERF 99

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
           V   L+ MY+  GN   AR +F    +  + S+  ++  +   G+  EA+ + H      
Sbjct: 100 VGNDLVFMYAAFGNPGEARRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKA 159

Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMST-DYNI-----IPTIEHYSCMVDLLGKA 853
           F+ D       + A      +  G  + D++    Y++     I  I  YS   ++    
Sbjct: 160 FKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAV 219

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
              D A  F+R      D   W  +L +C  H
Sbjct: 220 QAFDRA--FLRAP--SSDVVSWTKILAACNEH 247


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/759 (30%), Positives = 376/759 (49%), Gaps = 114/759 (15%)

Query: 396  SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
            SR     L +   +G+    + +HG+  K      L+  N L+++Y +++ L+ A ++FD
Sbjct: 32   SRQPCSFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFD 91

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
             +   N  +W  +IS     G+   A                             GS + 
Sbjct: 92   EITHKNTQTWTILIS-----GFARAA-----------------------------GSSEL 117

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            V +L R MQ+ G  PN  ++S VL+  +    +++G+  H +ILRNG+  D+ +  S++D
Sbjct: 118  VFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILD 177

Query: 576  MYVKNDCLQNAQ-------------------------------EVFDNMKNRNIVAWNSL 604
            +Y+K    + A+                               E+F N  N+++V+WN++
Sbjct: 178  LYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTI 237

Query: 605  ISG--------------YCFKG--------LFVNAKKMLNQMEEEEI------------- 629
            I G              YC            F  A  +++ +   E+             
Sbjct: 238  IDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGL 297

Query: 630  KPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-------NSGIY-----PNVVTWTSLISG 677
              D    +SLV  Y   G+  +A  I+  +        N G+        +V+W+S++SG
Sbjct: 298  NSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSG 357

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             + N  Y + +K F  M  E I  +  T+++++  C   G+L+ GK+IH    K G   D
Sbjct: 358  YVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRID 417

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            AYV + LIDMYSKSG+L  A  +F +     +  W  MI G A++G GKEAI LF  +L 
Sbjct: 418  AYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLN 477

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G  P+ +TF  +L AC + GL+EEG +YF  M   Y+I P +EHY+ MV+L G+AG+L 
Sbjct: 478  LGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLI 537

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA +FI         ++W + L SCR+H +    +  S  L +  P +   Y L+ N+ +
Sbjct: 538  EAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCS 597

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             +++W++   +R  M + GVK     SW+Q+   +H F+     HP   EIY  L  L+ 
Sbjct: 598  SNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIG 657

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSH-TEKLAIVYGLMKTKSRAPIRVIKNTRVCS 1036
             +K++GY  D + V QD+ EEE+G+VL+SH +EKLA+V+ ++ T  R PIR++KN R+C+
Sbjct: 658  RLKEIGYSLDAKLVMQDV-EEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICN 716

Query: 1037 DCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            DCH   KY S +  REI +RD  RFHHF++  CSC + W
Sbjct: 717  DCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 129/567 (22%), Positives = 237/567 (41%), Gaps = 104/567 (18%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMG--KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYF 254
           FL+ T       S+++ H    K G  +I NS + + +L   Y++  +   A K F    
Sbjct: 38  FLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTL---YVKSSNLDHAHKLFDEIT 94

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            ++   W+  +  +    G  + +  ++ E+   G       L+ +LK C++      G 
Sbjct: 95  HKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGK 154

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            +HA +++ G   DV L+ ++++ Y KC++ E A   F E+   +D + WN +I   LR 
Sbjct: 155 GIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFF-ELMIEKDVVSWNIMIGAYLRE 213

Query: 375 EKWENAIKLFREMQFSSAKAIS-RTIVKMLQAC--------------------------- 406
              E ++++FR   F +   +S  TI+  L  C                           
Sbjct: 214 GDVEKSLEMFR--NFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSI 271

Query: 407 -----AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
                + +     G+Q+HG VL   L S+  + + L+ MY +  +++ A+ +        
Sbjct: 272 ALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILK------ 325

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMN----SSRIQPDIITWNCLLSGHFTHGSYQNVL 517
                            DV  +   K N        +  +++W+ ++SG+  +G Y++ +
Sbjct: 326 -----------------DVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGM 368

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
              R M       +  +V+ ++ A     +L++G++ H YI + GL  D YVG+SL+DMY
Sbjct: 369 KTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMY 428

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            K+  L +A  +F+ +K  N+V W S+ISG C                            
Sbjct: 429 SKSGSLDDALMIFEQIKEPNVVLWTSMISG-C---------------------------- 459

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
                 ++ GQ KEA+ +   M N GI PN VT+  +++         E  ++F  M+  
Sbjct: 460 ------ALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDT 513

Query: 698 -DIKPNSTTMSSLLQTCGGLGLLQNGK 723
             I P     +S++   G  G L   K
Sbjct: 514 YHINPEVEHYTSMVNLYGRAGHLIEAK 540


>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
            mitochondrial-like [Brachypodium distachyon]
          Length = 617

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/583 (34%), Positives = 319/583 (54%), Gaps = 45/583 (7%)

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            +PD +++N LLS HF  G  +    L   M +     N +S + +L              
Sbjct: 79   RPDAVSYNTLLSCHFAAGDVRGARDLFAAMPATA--RNVTSWNTML-------------- 122

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
                   +GL     VG               A+ VF  M  RN ++WN+++S +   G 
Sbjct: 123  -------SGLSRSGAVG--------------EARAVFLAMPARNSISWNAMVSCFAHAGD 161

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
               A++     E+   K + V W ++VSGY   G  ++A+     M       ++V+W +
Sbjct: 162  MCAAEECF---EDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMP----VRSLVSWNA 214

Query: 674  LISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
            +++G ++N    ++L  F  M ++ D++PN +T+SS+L  C  L  L  G+++H  C K 
Sbjct: 215  VVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKL 274

Query: 733  GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
               +     T L+ MY K G+L  A ++F +   + + +WN MI G+A +G+G+EAI LF
Sbjct: 275  PLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELF 334

Query: 793  HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
             ++   G +P+ ITF A+L AC ++G+ + G + F+ M   Y I   ++HYSCMVDLL +
Sbjct: 335  EKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCR 394

Query: 853  AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
            AG L+ A   IR+MPF+P  + +G LL + R++ ++E+AE A+ +L +  P N+  Y  +
Sbjct: 395  AGSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQL 454

Query: 913  MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
             N+ A++N+W DV R+R  M +  V     +SW++I+ ++HVF +    HP    I+  L
Sbjct: 455  ANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERL 514

Query: 973  YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
              L   MK +GYVPD      D+DE  K ++L+ H+EKLAI +GL+ T     +R+ KN 
Sbjct: 515  CQLEERMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNL 574

Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            RVC DCHTAAK +S +  REI LRD  RFHHFR G CSC D W
Sbjct: 575  RVCGDCHTAAKLISKIEDREIILRDTTRFHHFRSGHCSCGDYW 617



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 132/259 (50%), Gaps = 13/259 (5%)

Query: 389 FSSAKAISRTIVK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           F++  A +R +     ML   ++ GA  E + +    L     +++S  N ++S ++   
Sbjct: 105 FAAMPATARNVTSWNTMLSGLSRSGAVGEARAV---FLAMPARNSIS-WNAMVSCFAHAG 160

Query: 446 KLELATRVFDSMKD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            +  A   F+   D  N   W +M+S Y   G+V+ A   F  M        +++WN ++
Sbjct: 161 DMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVR----SLVSWNAVV 216

Query: 505 SGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           +G+  +   ++ L + + M +    RPN S++S VL   + L  L +GR+ H +  +  L
Sbjct: 217 AGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPL 276

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
              +  GTSL+ MY K   L  A ++F  M+ R+++AWN++ISGY   G    A ++  +
Sbjct: 277 SRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEK 336

Query: 624 MEEEEIKPDLVSWNSLVSG 642
           M+ + ++P+ +++ ++++ 
Sbjct: 337 MKSQGVEPNWITFVAVLTA 355



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 47/297 (15%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM-QFSSA 392
           A+++ Y     VE A + F E   +   + WN ++   ++N + E+A+ +F+ M + +  
Sbjct: 183 AMVSGYMDSGHVEKAMQFF-EAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADV 241

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +    T+  +L  C+ + A   G+Q+H +                        KL L+ R
Sbjct: 242 RPNESTLSSVLLGCSNLSALGFGRQVHQWC----------------------TKLPLSRR 279

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           V         ++  S++S Y   G +D A  LF++M   RI+ D+I WN ++SG+  HG 
Sbjct: 280 V---------TAGTSLVSMYCKCGDLDGACKLFSEM---RIR-DVIAWNAMISGYAHHGD 326

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR-NGLDYDLYVGT 571
            +  + L   M+S G  PN  +   VL A     +  +G +    +    G++  +   +
Sbjct: 327 GREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYS 386

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
            ++D+  +   L+ A  +  +M       +    S Y   G  +NA ++   ME  E
Sbjct: 387 CMVDLLCRAGSLERAVSLIRSMP------FQPHPSAY---GTLLNASRVYKNMEFAE 434



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 34/294 (11%)

Query: 174 LALPPTDTLAKQAQLSCISSG--FCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVK 231
           LA+P  ++++  A +SC +     C   E     C      K   ++     W +     
Sbjct: 139 LAMPARNSISWNAMVSCFAHAGDMCAAEE-----CFEDAPDKENAVL-----WTA----- 183

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL-HGKGV 290
            ++  Y++ G    A + F     RS   W++ +  Y       ++ L V+  +     V
Sbjct: 184 -MVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVK-NSRAEDALWVFKTMVRDADV 241

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
                 L+ +L  C+ L A   G +VH    K      V    +L++ Y KC D++ A K
Sbjct: 242 RPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACK 301

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LFSE+  + D + WN +I     +     AI+LF +M+    +    T V +L AC   G
Sbjct: 302 LFSEMR-IRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTG 360

Query: 411 -------AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
                   F   ++++G      +E+ +   +C++ +  R   LE A  +  SM
Sbjct: 361 MCDFGMQCFERMQEVYG------IEARVDHYSCMVDLLCRAGSLERAVSLIRSM 408


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/752 (29%), Positives = 368/752 (48%), Gaps = 99/752 (13%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            + A+ + R+ Q       S   V +L  C + G     + +HG+++K+   +++ V   L
Sbjct: 62   QEAMGMLRDGQ----TVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSL 117

Query: 438  ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
            +++Y R      A R+FD M D N                                   +
Sbjct: 118  VNVYMRCASSRDARRLFDGMPDKN-----------------------------------V 142

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            +TW  L++GH  +      L +   M  LG  P+  ++  +L A +  R +  G++ HGY
Sbjct: 143  VTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGY 202

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG------YCFK 611
             ++ G D    +G SL  +Y K+  L++    F    ++N++ W ++IS       Y   
Sbjct: 203  SIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDL 262

Query: 612  GL-----FVNAKKMLNQMEEEEI-------------------------KPDLVSWNSLVS 641
            GL      +    M N+     +                         + +L   NS + 
Sbjct: 263  GLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMY 322

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ-----------NENYRESLKF 690
             Y   G++ EA+ +   M +S I    +TW ++ISG  Q                ++LK 
Sbjct: 323  LYLRKGETDEAMRLFEEMDSSSI----ITWNAMISGYAQIMDSAKDDLHARSRGFQALKL 378

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F  + + ++KP+  T SS+L  C  +  L+ G++IH   +K G + D  V + L++MY+K
Sbjct: 379  FRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNK 438

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             G+++ A + F +   +T  +W  MI G++ +G  ++AI LF +++ +G +P+ ITF +L
Sbjct: 439  CGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSL 498

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L+AC  +GLVEE  +YFD M  +Y+I P ++HY CMVD+  + G LD+A+ FI+   F+P
Sbjct: 499  LSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEP 558

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            +  IW +L+  CR HG++E A  A+ RL +L+P     Y L++N+   + RW DV R+R 
Sbjct: 559  NEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRK 618

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP---- 986
                  V  +   SWI I   V+ F A+   HP   E+Y  L +L+ + K +GY P    
Sbjct: 619  LAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQNA 678

Query: 987  -----DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
                 D++    D      G ++  H+E+LA+  GL++T   A +RV KN  +C DCH++
Sbjct: 679  PELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMCRDCHSS 738

Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             KY SL+  REI +RD  R H F++G CSC D
Sbjct: 739  IKYFSLLANREIVVRDSKRLHKFKDGRCSCGD 770



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 135/577 (23%), Positives = 232/577 (40%), Gaps = 84/577 (14%)

Query: 280 EVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY 339
           E  G L   G   +S +   +L  C +         +H  ++K G   D+ +  +L+N Y
Sbjct: 63  EAMGMLR-DGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVY 121

Query: 340 GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
            +C     A +LF  + D ++ + W  +I     N +   A+++F EM          T+
Sbjct: 122 MRCASSRDARRLFDGMPD-KNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTL 180

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
             ML AC+       G+Q+HGY +K   ++  S+ N L  +Y ++  LE   R F    D
Sbjct: 181 GGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPD 240

Query: 460 HNLSSWNSMISSYT-GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
            N+ +W +MISS      Y+D+  SLF  M    + P                   N  T
Sbjct: 241 KNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMP-------------------NEFT 281

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
           L   M   G R +                +  G++   +  + G + +L V  S M +Y+
Sbjct: 282 LTSVMSLCGARLD----------------MSLGKQVQAFCYKVGCEANLPVKNSTMYLYL 325

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYC-----------FKGLFVNAKKMLNQMEEE 627
           +      A  +F+ M + +I+ WN++ISGY             +     A K+   +   
Sbjct: 326 RKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRS 385

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV------------------- 668
           E+KPDL +++S++S  S     ++   I  +   +G   +V                   
Sbjct: 386 ELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECA 445

Query: 669 ------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
                       VTWTS+ISG  Q+   +++++ F  M     +PN  T  SLL  C   
Sbjct: 446 TKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYA 505

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSAREVFRKSA-NKTLASWNC 774
           GL++  +    +      I+      G ++DM+ + G L  A    +++      A W+ 
Sbjct: 506 GLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSS 565

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           ++ G   +GN + A      LLE   +P  I    LL
Sbjct: 566 LVAGCRSHGNMELAFYAADRLLE--LKPKVIETYVLL 600



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 190/420 (45%), Gaps = 50/420 (11%)

Query: 520 LRGMQSLGFRPNGSSVS-----VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
           L   +++G   +G +V       +L    E   L   R  HG++++ G   D++V TSL+
Sbjct: 59  LDAQEAMGMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLV 118

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           ++Y++    ++A+ +FD M ++N+V W +LI+G+        A ++  +M E    P   
Sbjct: 119 NVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHY 178

Query: 635 SWNSLVS----------GYSIWGQS-KEALVIIHHMKN-------------SGIYP---- 666
           +   ++S          G  + G S K     I  M N             SG+      
Sbjct: 179 TLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGT 238

Query: 667 ---NVVTWTSLISGSLQNENYRE-SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
              NV+TWT++IS   ++ENY +  L  F+ M +  + PN  T++S++  CG    +  G
Sbjct: 239 PDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLG 298

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA-- 780
           K++   C K G   +  V    + +Y + G    A  +F +  + ++ +WN MI G+A  
Sbjct: 299 KQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQI 358

Query: 781 ---------IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
                        G +A+ LF +L+ +  +PD  TF+++L+ C     +E+G +   + +
Sbjct: 359 MDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQG-EQIHANT 417

Query: 832 TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
                +  +   S +V++  K G ++ A      MP +   T W +++     HG  + A
Sbjct: 418 IKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVT-WTSMISGYSQHGRSQDA 476



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 139/295 (47%), Gaps = 24/295 (8%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL------EDYESFGGEVQELLEVW 282
           M  SL   Y + GD  S  +AF     ++   W++ +      E+Y   G      L ++
Sbjct: 214 MGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLG------LSLF 267

Query: 283 GELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
            ++   GV+     LT ++ LC   +   LG +V A   K G + ++ +K + M  Y + 
Sbjct: 268 LDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRK 327

Query: 343 RDVESANKLFSEVSDLEDDLLWNEII------MVKLRNE-----KWENAIKLFREMQFSS 391
            + + A +LF E+ D    + WN +I      M   +++     +   A+KLFR++  S 
Sbjct: 328 GETDEAMRLFEEM-DSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSE 386

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            K    T   +L  C+ + A  +G+QIH   +K+   S++ V + L++MY++   +E AT
Sbjct: 387 LKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECAT 446

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           + F  M      +W SMIS Y+  G    A  LF  M  S  +P+ IT+  LLS 
Sbjct: 447 KAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSA 501



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 141/301 (46%), Gaps = 22/301 (7%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S ++ YL  G+   A + F    S S   W++ +  Y       ++ L           +
Sbjct: 319 STMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKL 378

Query: 292 FRSRI----------LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
           FR  +           + IL +C+ +MA   G ++HA+ IK G   DV +  AL+N Y K
Sbjct: 379 FRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNK 438

Query: 342 CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
           C  +E A K F E+      + W  +I    ++ + ++AI+LF +M  S A+    T V 
Sbjct: 439 CGSIECATKAFVEMP-TRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVS 497

Query: 402 MLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-- 458
           +L AC+  G   E ++    +     +E  +    C++ M+ R  +L+ A   F  +K  
Sbjct: 498 LLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDA---FSFIKRT 554

Query: 459 --DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII-TWNCLLSGHFTHGSYQN 515
             + N + W+S+++     G +++A+   +++    ++P +I T+  LL+ + + G +++
Sbjct: 555 GFEPNEAIWSSLVAGCRSHGNMELAFYAADRL--LELKPKVIETYVLLLNMYISTGRWRD 612

Query: 516 V 516
           V
Sbjct: 613 V 613


>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis
            thaliana]
 gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic; Flags: Precursor
 gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
 gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
 gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis
            thaliana]
          Length = 632

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/607 (35%), Positives = 326/607 (53%), Gaps = 49/607 (8%)

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            +Y   G +  + +LF++     I PD+  +   ++    +G       L   + S    P
Sbjct: 73   AYASHGKIRHSLALFHQT----IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINP 128

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  + S +L++ +     K G+  H ++L+ GL  D YV T L+D+Y K   + +AQ+VF
Sbjct: 129  NEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
            D M  R++V+  ++I+ Y  +G    A+ + + M E     D+VSWN ++ GY+  G   
Sbjct: 185  DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER----DIVSWNVMIDGYAQHG--- 237

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSL 709
                          +PN                  ++L  F ++  E   KP+  T+ + 
Sbjct: 238  --------------FPN------------------DALMLFQKLLAEGKPKPDEITVVAA 265

Query: 710  LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            L  C  +G L+ G+ IH     +    +  V TGLIDMYSK G+L+ A  VF  +  K +
Sbjct: 266  LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325

Query: 770  ASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
             +WN MI G+A++G  ++A+ LF+E+   TG QP  ITF   L AC ++GLV EG + F+
Sbjct: 326  VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            SM  +Y I P IEHY C+V LLG+AG L  A++ I+ M    D+ +W ++LGSC++HG  
Sbjct: 386  SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
               +  +  L  L   NS  Y L+ N+ A    +E V ++R+ M E G+      S I+I
Sbjct: 446  VLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEI 505

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
            +  VH F A    H  + EIY  L  +   +K  GYVP+T  V QD++E EK + L  H+
Sbjct: 506  ENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHS 565

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            E+LAI YGL+ TK  +P+++ KN RVCSDCHT  K +S + GR+I +RD  RFHHF +G 
Sbjct: 566  ERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGS 625

Query: 1069 CSCNDCW 1075
            CSC D W
Sbjct: 626  CSCGDFW 632



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 227/481 (47%), Gaps = 40/481 (8%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNF-----YGKCRDVESANKLFSEVSDLEDDLLWNEII 368
           +++HA++++   +  +H +  ++N      Y     +  +  LF +  D  D  L+   I
Sbjct: 46  LQIHAAILRH--NLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID-PDLFLFTAAI 102

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
                N   + A  L+ ++  S       T   +L++C+       GK IH +VLK  L 
Sbjct: 103 NTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLG 158

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            +  V   L+ +Y++   +  A +VFD M + +L S  +MI+ Y   G V+ A +LF+ M
Sbjct: 159 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 218

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRL 547
                + DI++WN ++ G+  HG   + L L + + + G  +P+  +V   L A +++  
Sbjct: 219 ----CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGA 274

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L+ GR  H ++  + +  ++ V T L+DMY K   L+ A  VF++   ++IVAWN++I+G
Sbjct: 275 LETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAG 334

Query: 608 YCFKGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIY 665
           Y   G   +A ++ N+M+    ++P  +++   +   +  G   E + I   M +  GI 
Sbjct: 335 YAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIK 394

Query: 666 PNVVTWTSLIS-----GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
           P +  +  L+S     G L+        + +  ++  ++  +S   SS+L +C   G   
Sbjct: 395 PKIEHYGCLVSLLGRAGQLK--------RAYETIKNMNMDADSVLWSSVLGSCKLHGDFV 446

Query: 721 NGKEIH----CLCLKNG----FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
            GKEI      L +KN      + + Y + G  +  +K  NL   + + ++    T+   
Sbjct: 447 LGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIE 506

Query: 773 N 773
           N
Sbjct: 507 N 507



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 20/251 (7%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + G+  +A   F     R    W+  ++ Y   G    + L ++ +L  +G  
Sbjct: 197 AMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFP-NDALMLFQKLLAEGKP 255

Query: 292 FRSRILTII-LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
               I  +  L  C+++ A   G  +H  +       +V +   L++ Y KC  +E A  
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ-FSSAKAISRTIVKMLQACAKV 409
           +F++ +  +D + WN +I     +   ++A++LF EMQ  +  +    T +  LQACA  
Sbjct: 316 VFND-TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 374

Query: 410 GAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           G  +EG +I       Y +K  +E       CL+S+  R  +L+   R ++++K+ N+ +
Sbjct: 375 GLVNEGIRIFESMGQEYGIKPKIEHY----GCLVSLLGRAGQLK---RAYETIKNMNMDA 427

Query: 465 ----WNSMISS 471
               W+S++ S
Sbjct: 428 DSVLWSSVLGS 438


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Cucumis sativus]
          Length = 609

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/596 (34%), Positives = 309/596 (51%), Gaps = 75/596 (12%)

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVL 539
            A  +FN++ +    P+I TWN ++ G     +    + L   M +     P+  +   + 
Sbjct: 88   AAQIFNQIQA----PNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLF 143

Query: 540  QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            +AV +L  +  G   H  ++RNG D   +V  SL+ MY      ++A +VF+ M  R   
Sbjct: 144  KAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYR--- 200

Query: 600  AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
                                            D V+WNS+++G+++ G   EAL +   M
Sbjct: 201  --------------------------------DRVAWNSVINGFALNGMPNEALTLYREM 228

Query: 660  KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
             + G+ P                                   +  TM SLL  C  LG L
Sbjct: 229  GSEGVEP-----------------------------------DGFTMVSLLSACVELGAL 253

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
              G+ +H   +K G +++ + +  L+D+YSK GN + A++VF +   +++ SW  +I+G 
Sbjct: 254  ALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGL 313

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A+ G G EA+ LF EL   G +P  ITF  +L AC + G+++EG+ YF  M  +Y I+P 
Sbjct: 314  AVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPR 373

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            IEH+ CMVDLL +AG + +A+D+IR MP  P+A IW  LLG+C IHGHLE  E+A   + 
Sbjct: 374  IEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQ 433

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            +LE  +S ++ L+ NL A   RW DV+ +R  M   GVK    +S +++   V+ F    
Sbjct: 434  RLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGD 493

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP + E Y  L  +   +K  GYVP T  V  DI+EEEK   L  HTEK+AI + L+ 
Sbjct: 494  RSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVN 553

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            T    PIR++KN RVC+DCH A K +S V  REI +RD +RFHHF++G CSC D W
Sbjct: 554  TPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 195/439 (44%), Gaps = 54/439 (12%)

Query: 297 LTIILKLCTKLMAFWLGVE-----VHASLIKRGF-----DFDVHLKCALMNFYGKCRDVE 346
           L+ IL+ C  L+      +     +HA  I+ G      DF+ HL  AL++       + 
Sbjct: 30  LSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MS 86

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF-SSAKAISRTIVKMLQA 405
            A ++F+++    +   WN +I     +E    A++LF +M   SS    + T   + +A
Sbjct: 87  FAAQIFNQI-QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKA 145

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
            AK+     G+ IH  V+++  +S   V N L+ MYS          VF           
Sbjct: 146 VAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS----------VF----------- 184

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
                     G+ + A+ +F  M+      D + WN +++G   +G     LTL R M S
Sbjct: 185 ----------GFAESAYQVFEIMSYR----DRVAWNSVINGFALNGMPNEALTLYREMGS 230

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            G  P+G ++  +L A  EL  L  G   H Y+++ GL  + +   +L+D+Y K    ++
Sbjct: 231 EGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRD 290

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           AQ+VFD M+ R++V+W SLI G    GL   A K+  ++E + +KP  +++  ++   S 
Sbjct: 291 AQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSH 350

Query: 646 WGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            G   E       MK   GI P +     ++    +     ++  +   M    + PN+ 
Sbjct: 351 CGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNM---PVPPNAV 407

Query: 705 TMSSLLQTCGGLGLLQNGK 723
              +LL  C   G L+ G+
Sbjct: 408 IWRTLLGACTIHGHLELGE 426



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 12/256 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SL+  Y  FG   SA + F +   R    W+S +  + +  G   E L ++ E+  +GV 
Sbjct: 176 SLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGF-ALNGMPNEALTLYREMGSEGVE 234

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +  +L  C +L A  LG  VH  ++K G   + H   AL++ Y KC +   A K+
Sbjct: 235 PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKV 294

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E+ +    + W  +I+    N     A+KLF E++    K    T V +L AC+  G 
Sbjct: 295 FDEMEE-RSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGM 353

Query: 412 FHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSW 465
             EG     +    Y +   +E +     C++ +  R  K+  A     +M    N   W
Sbjct: 354 LDEGFNYFRRMKEEYGILPRIEHH----GCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIW 409

Query: 466 NSMISSYTGLGYVDVA 481
            +++ + T  G++++ 
Sbjct: 410 RTLLGACTIHGHLELG 425



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 52/279 (18%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKD--AYVATGLIDMYSKSGNLKSAREVFRKSA 765
           SL+Q CG        K+IH   +++G       +    +  + S S  +  A ++F +  
Sbjct: 39  SLVQLCGSSQ--SKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQ 96

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHEL-LETGFQPDAITFTALLAA----------- 813
              + +WN MI GFA   N   A+ LF ++   +   PD  TF  L  A           
Sbjct: 97  APNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGE 156

Query: 814 ----------------CKNS--------GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
                            +NS        G  E  ++ F+ MS    +      ++ +++ 
Sbjct: 157 GIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVA-----WNSVING 211

Query: 850 LGKAGYLDEAWDFIRTM---PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-N 905
               G  +EA    R M     +PD     +LL +C   G L   E     + K+    N
Sbjct: 212 FALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQN 271

Query: 906 SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
               N +++L +    + D +++   M+E   +SV+ W+
Sbjct: 272 QHASNALLDLYSKCGNFRDAQKVFDEMEE---RSVVSWT 307


>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/619 (33%), Positives = 357/619 (57%), Gaps = 24/619 (3%)

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW--ENAIKLFREMQFSS 391
           A++  Y +   +  A K+F ++        +N +I    R+       A KLF EM+  +
Sbjct: 67  AMLTAYYENGHIAKARKMFEKMPQ-RTTASYNAMITAYTRSNPMMIGEASKLFAEMRERN 125

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC-NCLISMYSRNNKLELA 450
               S +   M+   A+ G     ++++   L++ +E    VC N LIS Y +  +LE A
Sbjct: 126 ----SISYAAMITGLARAGMVDNAEELY---LETPVEWRDPVCSNALISGYLKVGRLEEA 178

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
           TR+F+ M + ++ SW+SM+  Y   G +  A  LF +M     + +++TW  ++ GH   
Sbjct: 179 TRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMP----ERNVVTWTAMIDGHMKM 234

Query: 511 GSYQNVLTLLRGMQSLGF-RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           G Y+    L   M+  GF + N ++++V+ +A +E    K G + HG + R G ++D+++
Sbjct: 235 GCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFL 294

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           G +++ MY +   +  A+++FD M  +++V+WN+LI+GY           +  + +++  
Sbjct: 295 GNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQK-- 352

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
             D++SW ++++G+S  G+  +++ +   M       + + WT++ISG + N  Y E++ 
Sbjct: 353 --DVISWTTMITGFSNKGKMGKSIELFRMMPKQ----DDIAWTAVISGFVGNGEYEEAIY 406

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
           +FI+M ++ ++PN  T+SS+L    GL  L  G +IH L +K G   D  +   L+ MY+
Sbjct: 407 WFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYT 466

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           K GN+    ++F    +  + S+N MI GFA  G G+EA+ LFH++L  G +P+ ITF  
Sbjct: 467 KCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLG 526

Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           +L+AC + GL+E+GW YF SM + Y I P   HY+C+VDLLG+AG+LD+A D IR+MP +
Sbjct: 527 VLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCE 586

Query: 870 PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
           P + +WGALLG+ RIH  L+ A++A++++FKLEP N+A Y ++  L + + R  D E++R
Sbjct: 587 PHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVR 646

Query: 930 HSMDEVGVKSVLVWSWIQI 948
            +    GVK    +SWI +
Sbjct: 647 MAQGLKGVKKSAGYSWIIV 665



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 192/439 (43%), Gaps = 66/439 (15%)

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
           C+  I+ + RN  L+ A  +F  M   N  SW +M+++Y   G++  A  +F KM     
Sbjct: 34  CHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMP---- 89

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF----RPNGSSVSVVLQAVTELRLLK 549
           Q    ++N +++      +Y     ++ G  S  F      N  S + ++  +    ++ 
Sbjct: 90  QRTTASYNAMIT------AYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVD 143

Query: 550 YGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
              E +   L   +++ D     +L+  Y+K   L+ A  +F+ M  R++++W+S++ GY
Sbjct: 144 NAEELY---LETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGY 200

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
           C KG   +A+++  +M E     ++V+W +++ G               HMK        
Sbjct: 201 CKKGKIGHARELFERMPER----NVVTWTAMIDG---------------HMKMG------ 235

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
                          Y      F++M++E  +K N TT++ + + C   G  + G ++H 
Sbjct: 236 --------------CYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHG 281

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
           L  + GF  D ++   +I MY +   +  AR++F     K + SWN +I G+      +E
Sbjct: 282 LVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEE 341

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
             +LF    E   Q D I++T ++    N G + +  + F  M    +I  T    + + 
Sbjct: 342 GYVLF----EKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWT----AVIS 393

Query: 848 DLLGKAGYLDEAWDFIRTM 866
             +G   Y +  + FI  +
Sbjct: 394 GFVGNGEYEEAIYWFIEML 412



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 164/396 (41%), Gaps = 94/396 (23%)

Query: 224 WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELLEV 281
           W       +LI  YL+ G    A + F     R    WSS ++ Y   G  G  +EL E 
Sbjct: 156 WRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFER 215

Query: 282 WGELH-------------------GKGVIFRSR----------ILTIILKLCTKLMAFWL 312
             E +                   G G+  R R           LT++ + C++   +  
Sbjct: 216 MPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKE 275

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G+++H  + + GF+FDV L  A++  Y +   V  A K+F ++ + +D + WN +I   +
Sbjct: 276 GIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIF-DMMNRKDVVSWNALIAGYV 334

Query: 373 RNEKWENAIKLFREMQ-------------FSSAKAISRTI-------------------- 399
           +N++ E    LF + Q             FS+   + ++I                    
Sbjct: 335 QNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISG 394

Query: 400 --------------VKMLQ---------------ACAKVGAFHEGKQIHGYVLKSALESN 430
                         ++ML+               A A +   ++G QIH  V+K  +E +
Sbjct: 395 FVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFD 454

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           LS+ N L+SMY++   +    ++F S+   N+ S+NSMI+ +   G+ + A  LF+KM +
Sbjct: 455 LSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLN 514

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
              +P+ IT+  +LS     G  +      + M+SL
Sbjct: 515 EGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSL 550


>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial [Vitis vinifera]
          Length = 744

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/620 (33%), Positives = 357/620 (57%), Gaps = 24/620 (3%)

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW--ENAIKLFREMQFS 390
            A++  Y +   +  A K+F ++        +N +I    R+       A KLF EM+  
Sbjct: 145 TAMLTAYYENGHIAKARKMFEKMPQ-RTTASYNAMITAYTRSNPMMIGEASKLFAEMRER 203

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC-NCLISMYSRNNKLEL 449
           +    S +   M+   A+ G     ++++   L++ +E    VC N LIS Y +  +LE 
Sbjct: 204 N----SISYAAMITGLARAGMVDNAEELY---LETPVEWRDPVCSNALISGYLKVGRLEE 256

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           ATR+F+ M + ++ SW+SM+  Y   G +  A  LF +M     + +++TW  ++ GH  
Sbjct: 257 ATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMP----ERNVVTWTAMIDGHMK 312

Query: 510 HGSYQNVLTLLRGMQSLGF-RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            G Y+    L   M+  GF + N ++++V+ +A +E    K G + HG + R G ++D++
Sbjct: 313 MGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVF 372

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           +G +++ MY +   +  A+++FD M  +++V+WN+LI+GY           +  + +++ 
Sbjct: 373 LGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQK- 431

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
              D++SW ++++G+S  G+  +++ +   M       + + WT++ISG + N  Y E++
Sbjct: 432 ---DVISWTTMITGFSNKGKMGKSIELFRMMPKQ----DDIAWTAVISGFVGNGEYEEAI 484

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMY 748
            +FI+M ++ ++PN  T+SS+L    GL  L  G +IH L +K G   D  +   L+ MY
Sbjct: 485 YWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMY 544

Query: 749 SKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFT 808
           +K GN+    ++F    +  + S+N MI GFA  G G+EA+ LFH++L  G +P+ ITF 
Sbjct: 545 TKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFL 604

Query: 809 ALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF 868
            +L+AC + GL+E+GW YF SM + Y I P   HY+C+VDLLG+AG+LD+A D IR+MP 
Sbjct: 605 GVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPC 664

Query: 869 KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
           +P + +WGALLG+ RIH  L+ A++A++++FKLEP N+A Y ++  L + + R  D E++
Sbjct: 665 EPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQV 724

Query: 929 RHSMDEVGVKSVLVWSWIQI 948
           R +    GVK    +SWI +
Sbjct: 725 RMAQGLKGVKKSAGYSWIIV 744



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 192/439 (43%), Gaps = 66/439 (15%)

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
           C+  I+ + RN  L+ A  +F  M   N  SW +M+++Y   G++  A  +F KM     
Sbjct: 113 CHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMP---- 168

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF----RPNGSSVSVVLQAVTELRLLK 549
           Q    ++N +++      +Y     ++ G  S  F      N  S + ++  +    ++ 
Sbjct: 169 QRTTASYNAMIT------AYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVD 222

Query: 550 YGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
              E +   L   +++ D     +L+  Y+K   L+ A  +F+ M  R++++W+S++ GY
Sbjct: 223 NAEELY---LETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGY 279

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
           C KG   +A+++  +M E     ++V+W +++ G               HMK        
Sbjct: 280 CKKGKIGHARELFERMPER----NVVTWTAMIDG---------------HMKMG------ 314

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
                          Y      F++M++E  +K N TT++ + + C   G  + G ++H 
Sbjct: 315 --------------CYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHG 360

Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
           L  + GF  D ++   +I MY +   +  AR++F     K + SWN +I G+      +E
Sbjct: 361 LVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEE 420

Query: 788 AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
             +LF    E   Q D I++T ++    N G + +  + F  M    +I  T    + + 
Sbjct: 421 GYVLF----EKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWT----AVIS 472

Query: 848 DLLGKAGYLDEAWDFIRTM 866
             +G   Y +  + FI  +
Sbjct: 473 GFVGNGEYEEAIYWFIEML 491



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 164/396 (41%), Gaps = 94/396 (23%)

Query: 224 WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQELLEV 281
           W       +LI  YL+ G    A + F     R    WSS ++ Y   G  G  +EL E 
Sbjct: 235 WRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFER 294

Query: 282 WGELH-------------------GKGVIFRSR----------ILTIILKLCTKLMAFWL 312
             E +                   G G+  R R           LT++ + C++   +  
Sbjct: 295 MPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKE 354

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G+++H  + + GF+FDV L  A++  Y +   V  A K+F ++ + +D + WN +I   +
Sbjct: 355 GIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIF-DMMNRKDVVSWNALIAGYV 413

Query: 373 RNEKWENAIKLFREMQ-------------FSSAKAISRTI-------------------- 399
           +N++ E    LF + Q             FS+   + ++I                    
Sbjct: 414 QNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISG 473

Query: 400 --------------VKMLQ---------------ACAKVGAFHEGKQIHGYVLKSALESN 430
                         ++ML+               A A +   ++G QIH  V+K  +E +
Sbjct: 474 FVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFD 533

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           LS+ N L+SMY++   +    ++F S+   N+ S+NSMI+ +   G+ + A  LF+KM +
Sbjct: 534 LSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLN 593

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
              +P+ IT+  +LS     G  +      + M+SL
Sbjct: 594 EGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSL 629


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic; AltName: Full=Protein CHLORORESPIRATORY
            REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/562 (35%), Positives = 310/562 (55%), Gaps = 45/562 (8%)

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG------- 607
            H +IL NG D D ++ T L+ MY     +  A++VFD  + R I  WN+L          
Sbjct: 100  HRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHG 159

Query: 608  -----------------------YCFKGLFVNAKKMLNQMEEEEIKPDLVS--------- 635
                                   Y  K    +   + + M+ +EI   L           
Sbjct: 160  EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
              +LV  Y+ +G    A  +   M       NVV+W+++I+   +N    E+L+ F +M 
Sbjct: 220  MTTLVDMYARFGCVDYASYVFGGMP----VRNVVSWSAMIACYAKNGKAFEALRTFREMM 275

Query: 696  QE--DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            +E  D  PNS TM S+LQ C  L  L+ GK IH   L+ G      V + L+ MY + G 
Sbjct: 276  RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335

Query: 754  LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
            L+  + VF +  ++ + SWN +I  + ++G GK+AI +F E+L  G  P  +TF ++L A
Sbjct: 336  LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C + GLVEEG + F++M  D+ I P IEHY+CMVDLLG+A  LDEA   ++ M  +P   
Sbjct: 396  CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            +WG+LLGSCRIHG++E AE ASRRLF LEP N+ NY L+ ++ A +  W++V+R++  ++
Sbjct: 456  VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
              G++ +    W+++ + ++ F +    +P   +I+  L  L  +MK+ GY+P T+ V  
Sbjct: 516  HRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLY 575

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            +++ EEK +++L H+EKLA+ +GL+ T    PIR+ KN R+C DCH   K++S    +EI
Sbjct: 576  ELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEI 635

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD  RFH F+ G CSC D W
Sbjct: 636  LVRDVNRFHRFKNGVCSCGDYW 657



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 155/310 (50%), Gaps = 9/310 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +   LI  Y + G    A K F     R+   W++      +  G  +E+L ++ +++  
Sbjct: 114 LATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL-TLAGHGEEVLGLYWKMNRI 172

Query: 289 GVIFRSRILTIILKLCTK----LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           GV       T +LK C      +     G E+HA L +RG+   V++   L++ Y +   
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM--QFSSAKAISRTIVKM 402
           V+ A+ +F  +  + + + W+ +I    +N K   A++ FREM  +   +   S T+V +
Sbjct: 233 VDYASYVFGGMP-VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           LQACA + A  +GK IHGY+L+  L+S L V + L++MY R  KLE+  RVFD M D ++
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDV 351

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            SWNS+ISSY   GY   A  +F +M ++   P  +T+  +L      G  +    L   
Sbjct: 352 VSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFET 411

Query: 523 M-QSLGFRPN 531
           M +  G +P 
Sbjct: 412 MWRDHGIKPQ 421



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 173/408 (42%), Gaps = 46/408 (11%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
            + VH  ++  G D D  L   L+  Y     V+ A K+F +        +WN +     
Sbjct: 96  ALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK-RTIYVWNALFRALT 154

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK----VGAFHEGKQIHGYVLKSALE 428
                E  + L+ +M     ++   T   +L+AC      V    +GK+IH ++ +    
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS 214

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           S++ +   L+ MY+R   ++ A+ VF  M   N                           
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN--------------------------- 247

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSVVLQAVTELR 546
                   +++W+ +++ +  +G     L   R M  ++    PN  ++  VLQA   L 
Sbjct: 248 --------VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLA 299

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L+ G+  HGYILR GLD  L V ++L+ MY +   L+  Q VFD M +R++V+WNSLIS
Sbjct: 300 ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLIS 359

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIY 665
            Y   G    A ++  +M      P  V++ S++   S  G  +E   +   M ++ GI 
Sbjct: 360 SYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK 419

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           P +  +  ++    +     E+ K    M+ E   P      SLL +C
Sbjct: 420 PQIEHYACMVDLLGRANRLDEAAKMVQDMRTE---PGPKVWGSLLGSC 464



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/455 (20%), Positives = 186/455 (40%), Gaps = 70/455 (15%)

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N++I    +  K + AI++  +    S +     I+     C    +  +  ++H ++L 
Sbjct: 50  NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLIL----CCGHRSSLSDALRVHRHILD 105

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           +  + +  +   LI MYS    ++ A +VFD  +   +  WN++  + T  G+ +    L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           + KMN   ++ D  T+  +L                               + V    T 
Sbjct: 166 YWKMNRIGVESDRFTYTYVLK------------------------------ACVASECTV 195

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             L+K G+E H ++ R G    +Y+ T+L+DMY +  C+  A  VF  M  RN+V+W+++
Sbjct: 196 NHLMK-GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254

Query: 605 ISGYCFKGLFVNAKKMLNQM--EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
           I+ Y   G    A +   +M  E ++  P+ V+  S++   +     ++  +I  ++   
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314

Query: 663 G---IYP----------------------------NVVTWTSLISGSLQNENYRESLKFF 691
           G   I P                            +VV+W SLIS    +   +++++ F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSK 750
            +M      P   T  S+L  C   GL++ GK +     ++  IK        ++D+  +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434

Query: 751 SGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN 784
           +  L  A ++ +    +     W  ++    I+GN
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGN 469



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 4/232 (1%)

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           LK  I++  ++  P+  T   L+  CG    L +   +H   L NG  +D ++AT LI M
Sbjct: 62  LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           YS  G++  AR+VF K+  +T+  WN +     + G+G+E + L+ ++   G + D  T+
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181

Query: 808 TALLAACKNSGLVEE---GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
           T +L AC  S          K   +  T       +   + +VD+  + G +D A     
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFG 241

Query: 865 TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLL 916
            MP + +   W A++     +G    A    R + +    +S N   M+++L
Sbjct: 242 GMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
            [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/585 (36%), Positives = 325/585 (55%), Gaps = 42/585 (7%)

Query: 530  PNGSSVSV----VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC--- 582
            PN +S +     +L   T LR LK   +   + ++  L  DL V T  ++    N     
Sbjct: 14   PNSNSNTTHPLSLLPKCTSLRELK---QLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTS 70

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
            +Q+A  +FD +   +IV +N++  GY      + A  +  Q+    + PD  ++ SL+  
Sbjct: 71   MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130

Query: 643  YSIWGQSKEA----LVIIHHMKNSGIY---------------------------PNVVTW 671
             +     +E      + I    +  +Y                           P VVT+
Sbjct: 131  CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             ++I+G  +     E+L  F ++Q  ++KP   TM S+L +C  LG L  GK +H    K
Sbjct: 191  NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            NGF +   V T LIDMY+K G+L  A  VF   A +   +W+ MIM +AI+G+G +A+ L
Sbjct: 251  NGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSL 310

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F E+ + G +PD ITF  LL AC ++GLVEEG++YF  M   Y +IP I+HY CMVDLLG
Sbjct: 311  FKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLG 370

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L+EA++FI  +P +P   +W  LL +C  HG++E  +    ++F+L+  +  +Y +
Sbjct: 371  RAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYII 430

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + NL A + RWEDV  +R  M+E GV  +   S ++++ +VH F +    H  + +++  
Sbjct: 431  LSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQA 490

Query: 972  LYHLVSEMKKLGYVPDTRCVYQ-DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            L  LV E+K +GYVP+T  V+  D+++EEK   L  H+EKLAI +GL+ T     IRV+K
Sbjct: 491  LDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVK 550

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH+AAK +SL+  R+I LRD  RFHHF++G+CSC D W
Sbjct: 551  NLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 194/431 (45%), Gaps = 48/431 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG---KCRDVESANKLFSEVS 356
           +L  CT L       ++ A  IK     D+ +    +NF         ++ A+ LF ++ 
Sbjct: 26  LLPKCTSLRELK---QLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIP 82

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
              D +L+N +     R +    A  LF ++ FS       T   +L+ACA   A  EG+
Sbjct: 83  Q-PDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR 141

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+H   +K  L  N+ VC  LI+MY+  N+++ A RVF                      
Sbjct: 142 QLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVF---------------------- 179

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN-VLTLLRGMQSLGFRPNGSSV 535
             D  W           +P ++T+N +++G +  GS  N  L+L R +Q+   +P   ++
Sbjct: 180 --DKIW-----------EPCVVTYNAMITG-YARGSRPNEALSLFRELQARNLKPTDVTM 225

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
             VL +   L  L  G+  H Y+ +NG +  + V T+L+DMY K   L +A  VF+NM  
Sbjct: 226 LSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAV 285

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
           R+  AW+++I  Y   G  + A  +  +M +   +PD +++  L+   S  G  +E    
Sbjct: 286 RDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEY 345

Query: 656 IHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            + M++  G+ P +  +  ++    +     E+ +F + +    I+P      +LL  CG
Sbjct: 346 FYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLP---IRPTPILWRTLLSACG 402

Query: 715 GLGLLQNGKEI 725
             G ++ GK +
Sbjct: 403 SHGNVELGKRV 413



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 150/341 (43%), Gaps = 24/341 (7%)

Query: 164 PNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKI 223
           PNS +N+   L+L P  T  ++            L +   F   + + S  + + K    
Sbjct: 14  PNSNSNTTHPLSLLPKCTSLRE------------LKQLQAFAIKTHLHSDLSVLTKFINF 61

Query: 224 WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
            + +    S+   +  F          F   +R YA   + L  +  F            
Sbjct: 62  CSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFT----------- 110

Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
           ++   G+         +LK C    A   G ++H   IK G   +V++   L+N Y  C 
Sbjct: 111 QILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACN 170

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
           +++ A ++F ++ +    + +N +I    R  +   A+ LFRE+Q  + K    T++ +L
Sbjct: 171 EMDCARRVFDKIWE-PCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVL 229

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
            +CA +GA   GK +H YV K+     + V   LI MY++   L+ A  VF++M   +  
Sbjct: 230 SSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQ 289

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
           +W++MI +Y   G+   A SLF +M  +  +PD IT+  LL
Sbjct: 290 AWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLL 330



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 12/339 (3%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           + L   +  H   IK+G   N   +  +LI  Y    +   A + F   +      +++ 
Sbjct: 135 KALEEGRQLHCLAIKLGLSENVY-VCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAM 193

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +  Y   G    E L ++ EL  + +      +  +L  C  L A  LG  +H  + K G
Sbjct: 194 ITGYAR-GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F+  V +  AL++ Y KC  ++ A  +F  ++ + D   W+ +IM    +     A+ LF
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENMA-VRDTQAWSAMIMAYAIHGHGLKAVSLF 311

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLISMYSR 443
           +EM+ +  +    T + +L AC+  G   EG +  +G   K  +   +    C++ +  R
Sbjct: 312 KEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGR 371

Query: 444 NNKLELATRVFDSMKDHNLSS-WNSMISSYTGLGYVDVAWSLFNK---MNSSRIQPDIIT 499
             +LE A      +        W +++S+    G V++   +  +   ++ S     II 
Sbjct: 372 AGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIIL 431

Query: 500 WN-CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
            N C  +G +   +Y   L   RG+  +   P  SSV V
Sbjct: 432 SNLCARAGRWEDVNYVRKLMNERGVVKI---PGCSSVEV 467


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 250/845 (29%), Positives = 396/845 (46%), Gaps = 121/845 (14%)

Query: 315  EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
            ++HA + K GFD +  L   L++ Y    +V++A KLF ++    +   WN++I   L  
Sbjct: 31   KLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPS-SNVSFWNKVISGLLAK 89

Query: 375  EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA-FHEGKQIHGYVLKSALESNLSV 433
            +     + LF  M   +      T   +L+AC+   A F   +QIH  ++     S+  V
Sbjct: 90   KLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLV 149

Query: 434  CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            CN LI +YS+N                               G+VD+A  +F ++     
Sbjct: 150  CNPLIDLYSKN-------------------------------GHVDLAKLVFERL----F 174

Query: 494  QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
              D ++W  ++SG   +G     + L   M      P     S VL A T++ L K G +
Sbjct: 175  LKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQ 234

Query: 554  SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
             HG+I++ GL  + +V  +L+ +Y +   L  A+++F  M  R+ +++NSLISG   +G 
Sbjct: 235  LHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF 294

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALVIIHHMKNSGIYP-- 666
               A ++  +M+ + +KPD V+  SL+S     G    G+   + VI   M +  I    
Sbjct: 295  SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGS 354

Query: 667  ------------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
                                    NVV W  ++    Q  N  ES   F+QMQ E + PN
Sbjct: 355  LLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPN 414

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              T  S+L+TC  LG L  G++IH   +K+GF  + YV + LIDMY+K G L +AR + +
Sbjct: 415  QYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            +   + + SW  MI G+  +    EA+ LF E+   G + D I F++ ++AC     + +
Sbjct: 475  RLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQ 534

Query: 823  GWK-----YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA--------------WD-- 861
            G +     Y    S D +I   +   + ++ L  K G +++A              W+  
Sbjct: 535  GQQIHAQSYISGYSEDLSIGNALAS-NVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAM 593

Query: 862  -------------------------------FIRTMPFKPDATIWGALLGSCRIHGHLEY 890
                                           F+  MP +PDA IW  LL +C +H ++E 
Sbjct: 594  ITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEI 653

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             E A+R L +LEP +SA Y L+ N+ A+S +W+  +R R  M + GVK     SWI++  
Sbjct: 654  GEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKN 713

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             +H F      HP   +IY  +  L     ++GYV D   +  D+++E+K      H+EK
Sbjct: 714  SIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEK 773

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA+ +GL+   +  PIRVIKN RVC+DCH   K++S +  R I +RD  RFHHF  G CS
Sbjct: 774  LAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCS 833

Query: 1071 CNDCW 1075
            C D W
Sbjct: 834  CKDYW 838



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 229/539 (42%), Gaps = 85/539 (15%)

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           M+    +A  +T + + + C   G+  + K++H  + KS  +    + + LI +Y  + +
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ A ++FD +   N+S WN +IS             LF+ M +  + PD          
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPD---------- 110

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                ++ +VL    G    G  P           VTE        + H  I+ +G    
Sbjct: 111 ---ESTFASVLRACSG----GKAPF---------QVTE--------QIHAKIIHHGFGSS 146

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
             V   L+D+Y KN  +  A+ VF+ +  ++ V+W ++ISG    G    A  +  QM +
Sbjct: 147 PLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHK 206

Query: 627 EEIKPD--------------------------LVSW---------NSLVSGYSIWGQSKE 651
             + P                           +V W         N+LV+ YS WG    
Sbjct: 207 SAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIA 266

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           A  I   M       + +++ SLISG  Q      +L+ F +MQ + +KP+  T++SLL 
Sbjct: 267 AEQIFSKMHRR----DRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLS 322

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
            C  +G    GK++H   +K G   D  +   L+D+Y K  ++++A E F  +  + +  
Sbjct: 323 ACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVL 382

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM- 830
           WN M++ +   GN  E+  +F ++   G  P+  T+ ++L  C + G ++ G +    + 
Sbjct: 383 WNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVI 442

Query: 831 --STDYNIIPTIEHYSC--MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
                +N+      Y C  ++D+  K G LD A   ++ +  + D   W A++     H
Sbjct: 443 KSGFQFNV------YVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 1/198 (0%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M++  I+ N  T   L + C   G L + K++H    K+GF  +  + + LID+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
           + +A ++F    +  ++ WN +I G        + + LF  ++     PD  TF ++L A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
           C       +  +   +    +    +    + ++DL  K G++D A   +    F  D+ 
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLA-KLVFERLFLKDSV 179

Query: 874 IWGALLGSCRIHGHLEYA 891
            W A++     +G  + A
Sbjct: 180 SWVAMISGLSQNGREDEA 197


>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
          Length = 807

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/780 (29%), Positives = 395/780 (50%), Gaps = 42/780 (5%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS-RSYADWSS 263
           R L + +  HAQ++K G  +  ++ +++ +  +    D    A+  F     R+   W++
Sbjct: 60  RDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAA 119

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +   +   G  +  L  + E+   G+   + ++  + K C  L     G  VH  + K 
Sbjct: 120 II-GVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKA 178

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G    V +  +L + YGKC  ++ A K+F  + D  + + WN +++  ++N  +E AI+L
Sbjct: 179 GLHHCVFVASSLADMYGKCGVLDDARKVFDYIPD-RNAVAWNALMVGYVQNGMYEEAIRL 237

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
             EM+    +    T+   L A A +G   EGKQ H   + + LE +  +   +++ Y +
Sbjct: 238 LSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCK 297

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              +E A  +FD M                                   I+ D++TWN L
Sbjct: 298 VGLIEYAEMIFDGM-----------------------------------IEKDVVTWNLL 322

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           +SG+   G  +  + + + M+    + +  ++S ++ A T  + LK G+E   Y +R+GL
Sbjct: 323 ISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGL 382

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           + D+ + ++ +DMY K   + NA++VFD+   ++++ WN+L+S Y   GL   A ++  +
Sbjct: 383 ESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYE 442

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M+ E + P++++WN ++      GQ  EA  +   M++SGI+PN+++WT++++G +QN  
Sbjct: 443 MQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGC 502

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVAT 742
             E++ F  +MQ+  ++PN+ T++  L  C  L  L  G+ IH   ++N  +   A + T
Sbjct: 503 SEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIET 562

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+DMY+K G++  A  VF       L  +N MI  +A+YG  +EAI L+  L + G +P
Sbjct: 563 SLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKP 622

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D IT T+LL+AC     V +  + F  M + + + P +EHY  MVDLL  AG  D+A   
Sbjct: 623 DNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRL 682

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
           +  MP+KPDA +  +L  SC      E  E  S+ L + EP NS NY ++ N  A+   W
Sbjct: 683 MEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYAVEGSW 742

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQI---DQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
           ++V ++R  M   G+K     SWIQI   ++ VHVF A    H    EI   L  L+ +M
Sbjct: 743 DEVAKMREMMKVKGLKKKPGCSWIQIKGEEEGVHVFVANDKTHLRNDEIQRMLALLLYDM 802



 Score =  207 bits (526), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 179/709 (25%), Positives = 323/709 (45%), Gaps = 126/709 (17%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESN 430
           +N +   A+ L  EM + + +       ++LQ C        G+QIH  +LK       N
Sbjct: 23  KNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARN 82

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
             +   L+  Y++ + LE+A  +F  ++  N+ SW ++I     +G  + A   F +M  
Sbjct: 83  EYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 142

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
           + I PD                  N +            PN      V +A   L+  ++
Sbjct: 143 NGIFPD------------------NFVV-----------PN------VCKACGALQWSRF 167

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           GR  HGY+ + GL + ++V +SL DMY K   L +A++VFD + +RN VAWN+L+ GY  
Sbjct: 168 GRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQ 227

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE-----ALVIIHHMK----- 660
            G++  A ++L++M +E I+P  V+ ++ +S  +  G  +E     A+ I++ ++     
Sbjct: 228 NGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 287

Query: 661 ---------------------NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
                                +  I  +VVTW  LISG +Q     E++     M++E++
Sbjct: 288 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENL 347

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           K +  T+S+L+        L+ GKEI C C+++G   D  +A+  +DMY+K G++ +A++
Sbjct: 348 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKK 407

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VF  +  K L  WN ++  +A  G   EA+ LF+E+      P+ IT+  ++ +   +G 
Sbjct: 408 VFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQ 467

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWG 876
           V E  + F  M +   I P +  ++ M++ L + G  +EA  F+R M     +P+A    
Sbjct: 468 VNEAKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTIT 526

Query: 877 ALLGSC----------RIHGHL----EYAEIAS------------------RRLFKLEPC 904
             L +C           IHG++    +Y+  AS                   R+F  + C
Sbjct: 527 VALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLC 586

Query: 905 NSAN-YNLMMNLLAMSNRWEDVERLRHSMDEVGVK--SVLVWSWI-------QIDQIVHV 954
           +    YN M++  A+  +  +   L  S+++ GVK  ++ + S +        ++Q + V
Sbjct: 587 SELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAIEV 646

Query: 955 FSAEGAPHPATG--EIYFELYHLVSE----------MKKLGYVPDTRCV 991
           F    + H      E Y  +  L++           M+++ Y PD R V
Sbjct: 647 FRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMV 695



 Score =  196 bits (497), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 179/735 (24%), Positives = 308/735 (41%), Gaps = 148/735 (20%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF---DV 329
           GE++E L +  E+  + +     I   IL+ C        G ++HA ++K+G DF   + 
Sbjct: 25  GEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKG-DFYARNE 83

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           +++  L+ FY KC  +E A  LFS++  + +   W  II VK R    E A+  F EM  
Sbjct: 84  YIETKLVIFYAKCDALEIAQVLFSKLR-VRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 142

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           +     +  +  + +AC  +     G+ +HGYV K+ L   + V + L  MY +   L+ 
Sbjct: 143 NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDD 202

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VFD + D N  +WN+++  Y   G  + A  L ++M    I+P  +T          
Sbjct: 203 ARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVT---------- 252

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                    VS  L A   +  ++ G++SH   + NGL+ D  +
Sbjct: 253 -------------------------VSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 287

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GTS+++ Y K   ++ A+ +FD M  +++V WN LISGY  +GL   A  M   M  E +
Sbjct: 288 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENL 347

Query: 630 KPDLVSWNSLVSGYSI-----WGQSKEALVIIHHMK------------------------ 660
           K D V+ ++L+S  +       G+  +   I H ++                        
Sbjct: 348 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKK 407

Query: 661 --NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
             +S +  +++ W +L+S    +    E+L+ F +MQ E + PN  T + ++     L L
Sbjct: 408 VFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLII-----LSL 462

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK----TLASWNC 774
           L+NG+                              +  A+E+F +  +      L SW  
Sbjct: 463 LRNGQ------------------------------VNEAKEMFLQMQSSGIFPNLISWTT 492

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN----------SGLVEEGW 824
           M+ G    G  +EAIL   ++ E+G +P+A T T  L+AC N           G +    
Sbjct: 493 MMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQ 552

Query: 825 KYFDSMSTDYNII---------------------PTIEHYSCMVDLLGKAGYLDEAWDFI 863
           +Y  S S + +++                       +  Y+ M+      G + EA    
Sbjct: 553 QYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLY 612

Query: 864 RTMP---FKPDATIWGALLGSCRIHGHLEYAEIASRRLFK---LEPCNSANYNLMMNLLA 917
           R++     KPD     +LL +C     +  A    R +     ++PC   +Y LM++LLA
Sbjct: 613 RSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPC-LEHYGLMVDLLA 671

Query: 918 MSNRWEDVERLRHSM 932
            +   +   RL   M
Sbjct: 672 SAGETDKALRLMEEM 686



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 21/261 (8%)

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P   ++   +S   +N   RE+L    +M   +I+        +LQ C     L  G++I
Sbjct: 9   PLSTSYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQI 68

Query: 726 HCLCLKNG--FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           H   LK G  + ++ Y+ T L+  Y+K   L+ A+ +F K   + + SW  +I      G
Sbjct: 69  HAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIG 128

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH- 842
            G+ A++ F E+LE G  PD      +   CK  G ++  W  F      Y     + H 
Sbjct: 129 LGEGALMGFVEMLENGIFPDNFVVPNV---CKACGALQ--WSRFGRGVHGYVAKAGLHHC 183

Query: 843 ---YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA--EIASRR 897
               S + D+ GK G LD+A      +P + +A  W AL+     +G  E A   ++  R
Sbjct: 184 VFVASSLADMYGKCGVLDDARKVFDYIPDR-NAVAWNALMVGYVQNGMYEEAIRLLSEMR 242

Query: 898 LFKLEP-------CNSANYNL 911
              +EP       C SA+ N+
Sbjct: 243 KEGIEPTRVTVSTCLSASANM 263


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/823 (28%), Positives = 400/823 (48%), Gaps = 77/823 (9%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
            +L+  Y   G  + A + F+    R+   W++ +    S  G ++E L  + ++   GV 
Sbjct: 386  ALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS-NGYLEEALRAYRQMRRDGVP 444

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
              +     ++ LC  L     G++V + +I  G    V +  +L+  +G    V  A KL
Sbjct: 445  CNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKL 504

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F  + +  D + WN +I +            +F +M+    +  + T+  ++  CA    
Sbjct: 505  FDRMEE-HDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDH 563

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
            F  G  IH   L+S+L+S+++V N L++MYS   KL  A  +F                 
Sbjct: 564  FSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF----------------- 606

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                      W++  +        D+I+WN ++S +  + +  + L  L  +      PN
Sbjct: 607  ----------WNMSRR--------DLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPN 648

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              + S  L A +    L  G+  H  +L+  L  +L VG SL+ MY K + +++A++VF 
Sbjct: 649  HLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQ 708

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--------------- 636
            +M   +IV++N LI GY        A ++ + M    IKP+ ++                
Sbjct: 709  SMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHN 768

Query: 637  ---------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                                 NSL++ Y+  G  + +  I + + N     N+V+W ++I
Sbjct: 769  YGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK----NIVSWNAII 824

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            + ++Q  +  E+LK FI MQ    K +   ++  L +C  L  L+ G ++H L +K+G  
Sbjct: 825  AANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLD 884

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             D+YV    +DMY K G +    +V    A +    WN +I G+A YG  KEA   F ++
Sbjct: 885  SDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQM 944

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
            + TG +PD +TF ALL+AC ++GLV++G  Y++SM++ + + P I+H  C+VDLLG+ G 
Sbjct: 945  VATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGR 1004

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
              EA  FI  MP  P+  IW +LL S R H +LE     +++L +L+P + + Y L+ NL
Sbjct: 1005 FAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNL 1064

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A + RW DV++LR  M  + +      SW+++   V  F      H    +IY +L  +
Sbjct: 1065 YATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEM 1124

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
            + +++++GY+ DT     D DEE+K + L +H+EKLA+ YGL+
Sbjct: 1125 LLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 1167



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 279/595 (46%), Gaps = 36/595 (6%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA   + G   +V++  AL++ YG    V  A +LF E+ +  + + W  +++   
Sbjct: 365 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPE-RNVVSWTALMVALS 423

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N   E A++ +R+M+       +     ++  C  +     G Q+   V+ S L++ +S
Sbjct: 424 SNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVS 483

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N LI+M+    ++  A ++FD M++H+  SWN+MIS Y+  G     + +F+ M    
Sbjct: 484 VANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHG 543

Query: 493 IQPDIITWN-----CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           ++PD  T       C  S HF+HGS         G+ SL  R +  S   V+ A+  +  
Sbjct: 544 LRPDATTLCSLMSVCASSDHFSHGS---------GIHSLCLRSSLDSSVTVINALVNMYS 594

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN----DCLQNAQEVFDNMKNRNIVAWNS 603
                    ++  N    DL    +++  YV+N    D L+   ++F   ++ N + ++S
Sbjct: 595 AAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSS 654

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
            +      G  ++ K +   + +  ++ +L+  NSL++ Y      ++A  +   M    
Sbjct: 655 ALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH- 713

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN-G 722
              ++V++  LI G    E+  ++++ F  M+   IKPN  TM ++  +      L N G
Sbjct: 714 ---DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYG 770

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           + +H   ++ GF+ D YVA  LI MY+K GNL+S+  +F    NK + SWN +I      
Sbjct: 771 RPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQL 830

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF-----DSMSTDYNII 837
           G+G+EA+ LF ++   G + D +     L++C +   +EEG +         + +D  ++
Sbjct: 831 GHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVV 890

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
                 +  +D+ GK G +DE    +     +P    W  L+     +G+ + AE
Sbjct: 891 ------NAAMDMYGKCGKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKYGYFKEAE 938



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/617 (20%), Positives = 250/617 (40%), Gaps = 82/617 (13%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN---KLFSEVSDLEDDLLWNEIIMVKL 372
           +H   ++         +  L+ FY + RD  +A     LF E++D      W   +   +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPST-WYTAVSGCV 319

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEGKQIHGYVLKSALES 429
           R      A ++ R M+          +  ++ AC + G       G  IH    ++ L  
Sbjct: 320 RCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMG 379

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           N+ +   L+ +Y     +  A R+F  M + N+ SW +++ + +  GY++ A        
Sbjct: 380 NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEA-------- 431

Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
                                      L   R M+  G   N ++ + V+     L    
Sbjct: 432 ---------------------------LRAYRQMRRDGVPCNANAFATVVSLCGSLENEV 464

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G +    ++ +GL   + V  SL+ M+     + +A+++FD M+  + ++WN++IS Y 
Sbjct: 465 PGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYS 524

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSW--------------------------------- 636
            +G+      + + M    ++PD  +                                  
Sbjct: 525 HQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVT 584

Query: 637 --NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
             N+LV+ YS  G+  +A  +  +M       ++++W ++IS  +QN N  ++LK   Q+
Sbjct: 585 VINALVNMYSAAGKLSDAEFLFWNMSRR----DLISWNTMISSYVQNCNSTDALKTLGQL 640

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
              +  PN  T SS L  C   G L +GK +H + L+    ++  V   LI MY K  ++
Sbjct: 641 FHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSM 700

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           + A +VF+      + S+N +I G+A+  +G +A+ +F  +   G +P+ IT   +  + 
Sbjct: 701 EDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSF 760

Query: 815 KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
            +S  +    +   +       +      + ++ +  K G L+ + +   ++  K +   
Sbjct: 761 ASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK-NIVS 819

Query: 875 WGALLGSCRIHGHLEYA 891
           W A++ +    GH E A
Sbjct: 820 WNAIIAANVQLGHGEEA 836


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 229/766 (29%), Positives = 384/766 (50%), Gaps = 82/766 (10%)

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
            F     T ++  C    +     ++H  ++K  +   + L+  ++N YGKC  ++ A K+
Sbjct: 157  FEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKV 216

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F +   L + + W  +I    +N +  +AI ++ +M  S       T   +++AC   G 
Sbjct: 217  F-DTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGD 275

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               G+Q+H +V+KS                                  H+L+S N++IS 
Sbjct: 276  IDLGRQLHAHVIKSWF-------------------------------GHHLTSQNALISM 304

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRP 530
            YT  G ++ A ++F ++ +     D+I+W  +++G+   G     L L R +   G ++P
Sbjct: 305  YTNFGQIEHASNVFTRIPTK----DLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQP 360

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N      V  A + L  L+YG++ HG  ++ GL  +++ G SL DMY K   L +A+  F
Sbjct: 361  NEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAF 420

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------------- 636
              +KN +IV+WN++I+ +   G    A     QM    + PD +++              
Sbjct: 421  CQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLN 480

Query: 637  ---------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                                 NSL++ Y+      +AL +   +  +    N+V+W +++
Sbjct: 481  QGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNA---NLVSWNAIL 537

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            S  LQ +   E+ + + +M     KP+S T+++LL TC  L  L  G ++HC  +K+G I
Sbjct: 538  SACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLI 597

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             D  V  GLIDMY+K G+LK AR+VF  + N  + SW+ +I+G+A  G G EA+ LF  +
Sbjct: 598  LDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIM 657

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
               G QP+ +T+   L+AC + GLVEEGW+ + SM T++ I PT EH+SC+VDLL +AG 
Sbjct: 658  TNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGC 717

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L EA  FI+      D T W  LL +C+ H +++ AE  +  + KL+P NSA   ++ N+
Sbjct: 718  LHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNI 777

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A +  WE+V +LR  M ++GV+ V   SWI++    H+F +E + HP    IY  L  L
Sbjct: 778  HASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEEL 837

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGK-------VLLSHTEKLAIV 1014
             S++   GY P   C  Q++  ++K         VL+ H +K  ++
Sbjct: 838  WSQVLDDGYDPCQSCYIQNMYLKKKNYIEYDPKIVLMLHYKKFVMI 883



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 225/505 (44%), Gaps = 48/505 (9%)

Query: 214 HAQMIK--MGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
           HA +IK   G    S +   +LI  Y  FG    A+  F    ++    W + +  Y   
Sbjct: 283 HAHVIKSWFGHHLTSQN---ALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQL 339

Query: 272 GGEVQELLEVWGELHGKGVIFRSR-ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
           G  V E L ++ +L  +G    +  I   +   C+ L+    G +VH   +K G   +V 
Sbjct: 340 GYRV-EALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVF 398

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
             C+L + Y K   + SA   F ++ +  D + WN II     N     AI  FR+M   
Sbjct: 399 AGCSLCDMYAKFGFLPSAKMAFCQIKN-PDIVSWNAIIAAFADNGDANEAIDFFRQMIHI 457

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
                S T + +L  C      ++G+QIH Y++K   +  ++VCN L++MY++ + L  A
Sbjct: 458 GLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDA 517

Query: 451 TRVF-DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
             VF D  ++ NL SWN+++S+          + L+ +M+ S  +PD IT          
Sbjct: 518 LNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSIT---------- 567

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                    ++ +L    EL  L  G + H Y +++GL  D+ V
Sbjct: 568 -------------------------ITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSV 602

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
              L+DMY K   L++A++VFD+ +N +IV+W+SLI GY   GL   A  +   M    +
Sbjct: 603 CNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGV 662

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
           +P+ V++   +S  S  G  +E   +   M+   GI P    ++ ++    +     E+ 
Sbjct: 663 QPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAE 722

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
            F   +Q+  +  + T   +LL  C
Sbjct: 723 TF---IQKSGLDADITAWKTLLAAC 744


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 240/894 (26%), Positives = 409/894 (45%), Gaps = 98/894 (10%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
             L+F Y  FG+   A + F    S +   +++ +  Y +  G+  E L++      K   
Sbjct: 103  DLVFMYAAFGNPGEARRIFDGLGSHNILSFTAIMRAYVT-AGDPDEALKILHLARLKAFK 161

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +L + ++         LG   H ++ + G+D D  +  +L+  Y  C ++E+A + 
Sbjct: 162  ADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQA 221

Query: 352  FSEV---SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            F      +   D + W +I+     +  +  A+ LF  M+           V +L +   
Sbjct: 222  FDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIG 281

Query: 409  VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
            +G   +GK+IH  VL   LE +  +   ++ MY+R   ++ A R FD +           
Sbjct: 282  LGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRID---------- 331

Query: 469  ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                                     QP +  W  L+  +   GS+ +V+ +L  M++ G 
Sbjct: 332  -------------------------QPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGV 366

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYI---LRNGLDYDLYVGTSLMDMYVKNDCLQN 585
            +PN  +   +L     L  L+ G++         +  LD    +GT+++ M+ +   +  
Sbjct: 367  KPNEVTFITILDTCKNL-ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMIL 425

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK--------------- 630
            A+E FD +  +++ A+ ++I+GY        A  +  +M    +                
Sbjct: 426  AREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACAS 485

Query: 631  -PDL-------------------VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
             PDL                   V   +LV  YS  G  ++A  +   ++     P+ + 
Sbjct: 486  IPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIER----PDTIA 541

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLC 729
            W+++I+   ++ + R ++    +MQQ+  +P   TM  +L  C   G+++   +++H L 
Sbjct: 542  WSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLL 601

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF---AIYGNGK 786
            +  GF  D  V   ++ MY+K G+++ A   F K  N  + +W  M+  +     Y    
Sbjct: 602  VDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASD 661

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
             A+ L   + + G  PD +TF  +L AC   G ++E  +YF  M  DY ++P +EHY  +
Sbjct: 662  RALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVAL 721

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL----EYAEIASRRLFKLE 902
            VD + + GYL EA D IR +P + +  IW ALL  C+            EI  +   KL+
Sbjct: 722  VDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLD 781

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
            P  +  + +       + RWE+ +R+R  M + G+K     S I I   VH F A    H
Sbjct: 782  PLGTGAHRV-------AARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSH 834

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKS 1022
            P T EIY E+  + + +KK GY+PDTR V  D+ E++K ++L  H+E+LA+ YG M T  
Sbjct: 835  PHTREIYAEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPP 894

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF-REGECSCNDCW 1075
              P+RVIKN RVC DCHTA+K  + V  REI +RD  RFHHF ++G CSC D W
Sbjct: 895  GQPLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 144/650 (22%), Positives = 273/650 (42%), Gaps = 67/650 (10%)

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
           +S G E +EL E    +  +   F       +L+LCT+L A   G  VH  + +   + +
Sbjct: 38  KSRGEEFRELQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAE 97

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
             +   L+  Y    +   A ++F  +    + L +  I+   +     + A+K+    +
Sbjct: 98  RFVGNDLVFMYAAFGNPGEARRIFDGLGS-HNILSFTAIMRAYVTAGDPDEALKILHLAR 156

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
             + KA    +   ++A         G+  H  + +   + +  V   LI MYS   ++E
Sbjct: 157 LKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIE 216

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A + FD                             F +  SS    D+++W  +L+   
Sbjct: 217 AAVQAFDRA---------------------------FLRAPSS----DVVSWTKILAACN 245

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            H  Y   L L   M+  G  P+      VL +V  L  +  G+  H  +L   L+ D  
Sbjct: 246 EHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSM 305

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           +GT+++ MY +   +Q+A   FD +    + AW  LI  YC  G F +  ++L +ME E 
Sbjct: 306 IGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEG 365

Query: 629 IKPDLVSWNSLV---------SGYSIWGQSKE------------------------ALVI 655
           +KP+ V++ +++          G  I   + E                        ++++
Sbjct: 366 VKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMIL 425

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                +     +V  +T++I+G   N+  RE+L  F +M +  +  ++  ++  +  C  
Sbjct: 426 AREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACAS 485

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
           +  L+ GK +HC  +  G  +D  V T L+DMYS+ G+++ A  VF +       +W+ M
Sbjct: 486 IPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAM 545

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
           I     +G+ + A+ +   + + G++P   T   +LAAC ++G++EE  +   S+  D  
Sbjct: 546 IAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGG 605

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS-CRI 884
                E    ++ +  K G + EA +    +   PD   W  +L + CR+
Sbjct: 606 FDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCRL 654



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/523 (21%), Positives = 224/523 (42%), Gaps = 76/523 (14%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ C ++ A  EG ++H ++ +S +E+   V N L+ MY+       A R+FD +  HN
Sbjct: 69  VLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHN 128

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           + S+ +++ +Y                                    T G     L +L 
Sbjct: 129 ILSFTAIMRAYV-----------------------------------TAGDPDEALKILH 153

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             +   F+ +   +++ ++A    R L  GR  H  I R G D D  V  SL+ MY    
Sbjct: 154 LARLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCG 213

Query: 582 CLQNAQEVFD----NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            ++ A + FD       + ++V+W  +++       ++ A  + ++M E+ + PD + + 
Sbjct: 214 EIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFV 273

Query: 638 SLVS-----GYSIWGQSKEALVIIHHMKNSGIY--------------------------P 666
           +++      G    G+   ++V+   ++   +                           P
Sbjct: 274 TVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQP 333

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            V  WT LI    +  ++   ++   +M+ E +KPN  T  ++L TC  L  L++GK+I 
Sbjct: 334 GVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLA-LEDGKKIQ 392

Query: 727 CLC---LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            L     +      A + T +I M+S+  ++  ARE F K + K++A++  MI G+A   
Sbjct: 393 ALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNK 452

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
             +EA+ +F E++      D +     ++AC +   +EEG K     + D  +       
Sbjct: 453 QPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLEEG-KALHCSAMDLGLHRDDVVR 511

Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           + +VD+  + G +++A      +  +PD   W A++ +   HG
Sbjct: 512 TALVDMYSRCGSMEDASAVFGEIE-RPDTIAWSAMIAALGRHG 553



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 82/212 (38%), Gaps = 10/212 (4%)

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
           + E +RE  +F   +   D   +  +   +LQ C  L  +  G  +H    ++    + +
Sbjct: 40  RGEEFRELQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERF 99

Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
           V   L+ MY+  GN   AR +F    +  + S+  ++  +   G+  EA+ + H      
Sbjct: 100 VGNDLVFMYAAFGNPGEARRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKA 159

Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMST-DYNI-----IPTIEHYSCMVDLLGKA 853
           F+ D       + A      +  G  + D++    Y++     I  I  YS   ++    
Sbjct: 160 FKADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAV 219

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
              D A  F+R      D   W  +L +C  H
Sbjct: 220 QAFDRA--FLRAP--SSDVVSWTKILAACNEH 247


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 243/834 (29%), Positives = 400/834 (47%), Gaps = 80/834 (9%)

Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS--LIFHYLEFGDFTS 245
           LSC+ +G       ++ R L+   + HA+    G++   DD+  +  L+  Y   G    
Sbjct: 23  LSCLPTG------GDRLRRLN--PAIHARATVAGRL---DDLFLTNLLLRGYSNLGRLRD 71

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           A   F     R+   W S +  Y   G +   +            +    +L  +L+ CT
Sbjct: 72  ARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACT 131

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
           +  A  LG +VH   +K   D +V++  AL+N Y K   ++ A  +F  +  +   + WN
Sbjct: 132 QSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALP-VRTPVTWN 190

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I    +      A++LF  M     +     +   + AC+ +G    G+QIHGY  +S
Sbjct: 191 TVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRS 250

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
           A E++ SV N LI +Y + ++L  A ++FD M+  NL SW +MIS     GY+       
Sbjct: 251 ATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMIS-----GYMQ------ 299

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
           N  N+  I    + WN                     M   G++P+G + + +L +   L
Sbjct: 300 NSFNAEAIT---MFWN---------------------MTQAGWQPDGFACTSILNSCGSL 335

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
             +  GR+ H ++++  L+ D YV  +L+DMY K + L  A+ VFD +   + +++N++I
Sbjct: 336 AAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMI 395

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV---------------------SGYS 644
            GY        A  +  +M    ++P L+++ SL+                     SG S
Sbjct: 396 EGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTS 455

Query: 645 IWGQSKEALVIIHH----------MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
           +   +  AL+ ++           + N   Y ++V W S+I G  QNE   E++K F Q+
Sbjct: 456 LDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQL 515

Query: 695 QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
               + PN  T  +L+     L  + +G++ H   +K G   D +V+  LIDMY+K G +
Sbjct: 516 LLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFI 575

Query: 755 KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           K  R +F  +  + +  WN MI  +A +G+ +EA+ +F  + E   +P+ +TF  +L+AC
Sbjct: 576 KEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSAC 635

Query: 815 KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
            ++G V EG  +F+SM ++Y+I P IEHY+ +V+L G++G L  A +FI  MP KP A +
Sbjct: 636 AHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAV 695

Query: 875 WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
           W +LL +C + G+ E    A+      +P +S  Y L+ N+ A    W DV  LR  MD 
Sbjct: 696 WRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDS 755

Query: 935 VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
            G       SWI++ + VH F   G  HP    IY  L  L S +K LGYVPDT
Sbjct: 756 SGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGYVPDT 809


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/578 (34%), Positives = 316/578 (54%), Gaps = 34/578 (5%)

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
            P       ++ A  + + L   R  H ++ R+ L  D ++  SL+ MY K   + +A+ V
Sbjct: 60   PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHV 119

Query: 590  FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS-----GYS 644
            FD +  R++V+W  LI+GY    +   A  +L  M     +P   ++ S +      G  
Sbjct: 120  FDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGR 179

Query: 645  IWGQSKEALVIIHHMKNSGIY---------------------------PNVVTWTSLISG 677
              G+   AL + +++ +  +Y                            N V+W +LI+G
Sbjct: 180  GIGEQMHALAVKYNL-DEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAG 238

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              +  +   +L  F +MQ+        T SS+      +G L+ G+ +H   +K+G    
Sbjct: 239  FARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLT 298

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            A+VA  ++ MY+KSG++  AR+VF +   + L +WN M+  FA YG GKEA+  F E+ +
Sbjct: 299  AFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRK 358

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G Q + ITF ++L AC + GLV+EG +YFD M  DYN+ P I+HY   VDLLG+AG L 
Sbjct: 359  YGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMK-DYNVEPEIDHYVSFVDLLGRAGLLK 417

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA  F+  MP +P A +WGALLG+CR+H + +  + A+  +F+L+P ++    L+ N+ A
Sbjct: 418  EALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYA 477

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             + +W+D  R+R  M   GVK     SW++I+  VH+F A+ + HP + EIY     + +
Sbjct: 478  STGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNT 537

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
             +KK GYVP+T  V   I E+E+   L  H+EK+A+ + L+   + A IR++KN R+C D
Sbjct: 538  RIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGD 597

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH+A +Y+S V  REI +RD  RFHHF  G CSC D W
Sbjct: 598  CHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 180/425 (42%), Gaps = 73/425 (17%)

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
           R    ++ ACA+       + IH ++ +S L  +  + N LI MY +   +  A  VFD 
Sbjct: 63  RVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDG 122

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
           +                                      D+++W  L++G+  +      
Sbjct: 123 IPTR-----------------------------------DVVSWTYLITGYAQNDMPAEA 147

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           L LL  M    FRP+G + +  L+A         G + H   ++  LD D+YVG++L+DM
Sbjct: 148 LGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDM 207

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
           Y +   +  A  VFD + ++N V+WN+LI+G+  KG          +M+         ++
Sbjct: 208 YARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTY 267

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNS-------------GIYP----------------- 666
           +S+ S  +  G  ++   +  HM  S             G+Y                  
Sbjct: 268 SSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQ 327

Query: 667 -NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            ++VTW ++++   Q    +E++  F ++++  I+ N  T  S+L  C   GL++ GK+ 
Sbjct: 328 RDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQY 387

Query: 726 HCLCLKNGFIK---DAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAI 781
             + +K+  ++   D YV+   +D+  ++G LK A   VF+     T A W  ++    +
Sbjct: 388 FDM-MKDYNVEPEIDHYVS--FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRM 444

Query: 782 YGNGK 786
           + N K
Sbjct: 445 HKNAK 449



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 147/307 (47%), Gaps = 8/307 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L+  ++ H+ + +  ++     ++ SLI  Y + G  + A   F    +R    W+  + 
Sbjct: 78  LAGARAIHSHLSR-SRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLIT 136

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSR--ILTIILKLCTKLMAFWLGVEVHASLIKRG 324
            Y       + L  +   L  +   FR      T  LK         +G ++HA  +K  
Sbjct: 137 GYAQNDMPAEALGLLPDMLRAR---FRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYN 193

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            D DV++  AL++ Y +C+ ++ A ++F  + D ++++ WN +I    R    E  +  F
Sbjct: 194 LDEDVYVGSALLDMYARCQQMDMAIRVFDWL-DSKNEVSWNALIAGFARKGDGETTLMKF 252

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
            EMQ +   A   T   +  A A++GA  +G+ +H +++KS  +    V N ++ MY+++
Sbjct: 253 AEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKS 312

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             +  A +VFD +   +L +WN+M++++   G    A + F ++    IQ + IT+  +L
Sbjct: 313 GSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVL 372

Query: 505 SGHFTHG 511
           +   +HG
Sbjct: 373 TA-CSHG 378



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 8/186 (4%)

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
           ++ P      S++  C     L   + IH    ++    D ++   LI MY K G +  A
Sbjct: 57  ELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDA 116

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL---AAC 814
           R VF     + + SW  +I G+A      EA+ L  ++L   F+P   TFT+ L    AC
Sbjct: 117 RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGAC 176

Query: 815 KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
              G+ E+      +++  YN+   +   S ++D+  +   +D A      +  K + + 
Sbjct: 177 GGRGIGEQ----MHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVS- 231

Query: 875 WGALLG 880
           W AL+ 
Sbjct: 232 WNALIA 237



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 52/260 (20%), Positives = 102/260 (39%), Gaps = 6/260 (2%)

Query: 216 QMIKMGKIWNSDDMV---KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           QM  +   +N D+ V    +L+  Y        A + F    S++   W++ +  + +  
Sbjct: 184 QMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGF-ARK 242

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+ +  L  + E+   G        + +     ++ A   G  VHA +IK G      + 
Sbjct: 243 GDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVA 302

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             ++  Y K   +  A K+F  V D  D + WN ++    +    + A+  F E++    
Sbjct: 303 NTILGMYAKSGSMVDARKVFDRV-DQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGI 361

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL-ELAT 451
           +    T + +L AC+  G   EGKQ    +    +E  +      + +  R   L E   
Sbjct: 362 QLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALI 421

Query: 452 RVFDSMKDHNLSSWNSMISS 471
            VF    +   + W +++ +
Sbjct: 422 FVFKMPMEPTAAVWGALLGA 441


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 226/733 (30%), Positives = 364/733 (49%), Gaps = 101/733 (13%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            +  ACA+     +G  +H Y+L     +++++ + N L++MY +   L+ A  +FD M  
Sbjct: 84   LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             N  SW  ++S Y   G +   ++LF+ M +                             
Sbjct: 144  RNFVSWTVLVSGYAQFGLIRECFALFSGMLAC---------------------------- 175

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
                    FRPN  + + VL A  E + +KYG + H   L+  LD+ +YV  +L+ MY K
Sbjct: 176  --------FRPNEFAFASVLCACEE-QDVKYGLQVHAAALKMSLDFSVYVANALITMYSK 226

Query: 580  ------NDCLQNAQE---VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
                    C Q   +   VF +M+ RN+++WNS+ISG+ F+GL   A  +   M    I+
Sbjct: 227  CSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIR 286

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKN----------SGIYP-------------- 666
             +  +   ++S  +    + + +   HH+KN          SG+                
Sbjct: 287  FNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYAD 346

Query: 667  -------------------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
                               ++V+WT++IS      +  ++   F Q+ +E+   +  T S
Sbjct: 347  LGGHISDCFKLFLDTSGEHDIVSWTAIIS-VFAERDPEQAFLLFCQLHRENFVLDRHTFS 405

Query: 708  SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
              L+ C      +N  E+H   +K GF  D  V+  LI  Y +SG+L  + +VF +    
Sbjct: 406  IALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCH 465

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
             L SWN M+  +AI+G  K+A+ LF ++      PD+ TF ALLAAC ++GLVEEG + F
Sbjct: 466  DLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIF 522

Query: 828  DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
            +SM+  + I P ++HYSCMVDL G+AG + EA + IR MP KPD+ IW +LLGSCR HG 
Sbjct: 523  NSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGE 582

Query: 888  LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
             + A++A+ +   L+P NS  Y  M N+ +    + +   +R  M +  V+     SW++
Sbjct: 583  ADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVE 642

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            + + VH F++ G  HP    I   L  L+ ++K++GY P+      DI+ E     L  H
Sbjct: 643  VGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHH 702

Query: 1008 TEKLAIVYGLMKTKSRAP-----IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            +EK+A+V+ +M  +  +P     I+++KN R+C DCH   K  S +  +EI +RD  RFH
Sbjct: 703  SEKMALVFAIM-NEGISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFH 761

Query: 1063 HFREGECSCNDCW 1075
            HF+   CSCND W
Sbjct: 762  HFKYATCSCNDYW 774



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/515 (22%), Positives = 216/515 (41%), Gaps = 54/515 (10%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           H  + K  KI N   +  +L+  Y + G    A   F     R++  W+  +  Y  FG 
Sbjct: 102 HYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFG- 160

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCT-KLMAFWLGVEVHASLIKRGFDFDVHLK 332
               + E +    G    FR         LC  +      G++VHA+ +K   DF V++ 
Sbjct: 161 ---LIRECFALFSGMLACFRPNEFAFASVLCACEEQDVKYGLQVHAAALKMSLDFSVYVA 217

Query: 333 CALMNFYGKC---------RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
            AL+  Y KC         +  + A  +F  + +  + + WN +I         + AI L
Sbjct: 218 NALITMYSKCSGGFGGSCDQTTDDAWMVFKSM-EYRNLISWNSMISGFQFRGLGDKAIGL 276

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F  M  +  +  S T++ +L                     S+L   +S  + + + +  
Sbjct: 277 FAHMYCNGIRFNSTTLLGVL---------------------SSLNHCMSTSDDINNTHHL 315

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGL-GYVDVAWSLFNKMNSSRIQPDIITWNC 502
            N  +L      S     +    +++ SY  L G++   + LF  +++S  + DI++W  
Sbjct: 316 KNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLF--LDTSG-EHDIVSWTA 372

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++S  F     +    L   +    F  +  + S+ L+A       K   E H  +++ G
Sbjct: 373 IISV-FAERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQG 431

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
              D  V  +L+  Y ++  L  +++VF  M   ++V+WNS++  Y   G    AK  L+
Sbjct: 432 FHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHG---RAKDALD 488

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQN 681
             ++ ++ PD  ++ +L++  S  G  +E   I + M  S GI P++  ++ ++      
Sbjct: 489 LFKQMDVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMV------ 542

Query: 682 ENYRESLKFFIQ---MQQEDIKPNSTTMSSLLQTC 713
           + Y  + K F     +++  +KP+S   SSLL +C
Sbjct: 543 DLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSC 577



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 202/489 (41%), Gaps = 99/489 (20%)

Query: 490 SSRIQPDIITWNCLLSGHFT--HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           +S  QP+ I  N     H     G+ +  L+L+    SL  +      + +  A  + + 
Sbjct: 38  ASIAQPETIARNVNTQIHTLSLQGNLEKALSLVYTNPSLTLQ----DYAFLFHACAQKKY 93

Query: 548 LKYGRESHGYILRN--GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
           +K G   H YIL     +  D+++  +L++MY K   L  A+ +FD M  RN V+W  L+
Sbjct: 94  IKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLV 153

Query: 606 SGY------------------CFKGLFVNAKKMLNQMEEEEIKPDL-------------- 633
           SGY                  CF+        +L   EE+++K  L              
Sbjct: 154 SGYAQFGLIRECFALFSGMLACFRPNEFAFASVLCACEEQDVKYGLQVHAAALKMSLDFS 213

Query: 634 -VSWNSLVSGYSI----WGQS-----KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
               N+L++ YS     +G S      +A ++   M+    Y N+++W S+ISG      
Sbjct: 214 VYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSME----YRNLISWNSMISGFQFRGL 269

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQT----------CGGLGLLQNGKEIHCLCLKNG 733
             +++  F  M    I+ NSTT+  +L +                L+N  ++HCL +K+G
Sbjct: 270 GDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSG 329

Query: 734 FIKDAYVATGLIDMYSK-SGNLKSAREVF-RKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            I +  V T L+  Y+   G++    ++F   S    + SW  +I  FA   + ++A LL
Sbjct: 330 LISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFA-ERDPEQAFLL 388

Query: 792 FHELLETGFQPDAITFTALLAACK-----------NSGLVEEGWKYFDSMSTDYNI---- 836
           F +L    F  D  TF+  L AC            +S ++++G+ + D++ ++  I    
Sbjct: 389 FCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGF-HNDTVVSNALIHAYG 447

Query: 837 ----------------IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
                              +  ++ M+      G   +A D  + M   PD+  + ALL 
Sbjct: 448 RSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMDVHPDSATFVALLA 507

Query: 881 SCRIHGHLE 889
           +C   G +E
Sbjct: 508 ACSHAGLVE 516



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 122/547 (22%), Positives = 218/547 (39%), Gaps = 135/547 (24%)

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII-------MVKLRNEKWENA 380
           D+ L   L+N Y KC  ++ A  LF ++    + + W  ++       +++     +   
Sbjct: 114 DIFLTNNLLNMYCKCGHLDYARYLFDQMPR-RNFVSWTVLVSGYAQFGLIRECFALFSGM 172

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           +  FR  +F+ A         +L AC +    + G Q+H   LK +L+ ++ V N LI+M
Sbjct: 173 LACFRPNEFAFAS--------VLCACEEQDVKY-GLQVHAAALKMSLDFSVYVANALITM 223

Query: 441 YSR---------NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           YS+         +   + A  VF SM+  NL SWNSMIS +   G  D A  LF  M   
Sbjct: 224 YSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHM--- 280

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                           + +G   N  TLL  + SL    + S        +     LK  
Sbjct: 281 ----------------YCNGIRFNSTTLLGVLSSLNHCMSTS------DDINNTHHLKNC 318

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVK-----NDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            + H   +++GL  ++ V T+L+  Y       +DC    +   D     +IV+W ++IS
Sbjct: 319 FQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCF---KLFLDTSGEHDIVSWTAIIS 375

Query: 607 GYCFK-------------------------------GLFV---NAKKMLNQMEEEEIKPD 632
            +  +                                 FV   NA ++ +Q+ ++    D
Sbjct: 376 VFAERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHND 435

Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
            V  N+L+  Y   G    +  +   M   G + ++V+W S++     +   +++L  F 
Sbjct: 436 TVVSNALIHAYGRSGSLALSEQVFTEM---GCH-DLVSWNSMLKSYAIHGRAKDALDLFK 491

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYSKS 751
           QM   D+ P+S T  +LL  C   GL++ G +I + +   +G        + ++D+Y ++
Sbjct: 492 QM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRA 548

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G +  A E+ RK   K                                  PD++ +++LL
Sbjct: 549 GKIFEAEELIRKMPMK----------------------------------PDSVIWSSLL 574

Query: 812 AACKNSG 818
            +C+  G
Sbjct: 575 GSCRKHG 581



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 182/440 (41%), Gaps = 47/440 (10%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV- 314
           R+   W+S +  ++ F G   + + ++  ++  G+ F S  L  +L      M+    + 
Sbjct: 252 RNLISWNSMISGFQ-FRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDIN 310

Query: 315 ---------EVHASLIKRGFDFDVHLKCALMNFYGKCR-DVESANKLFSEVSDLEDDLLW 364
                    ++H   +K G   +V +  AL+  Y      +    KLF + S   D + W
Sbjct: 311 NTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSW 370

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
             II V    +  E A  LF ++   +      T    L+ACA         ++H  V+K
Sbjct: 371 TAIISVFAERDP-EQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMK 429

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
               ++  V N LI  Y R+  L L+ +VF  M  H+L SWNSM+ SY   G    A  L
Sbjct: 430 QGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDL 489

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVT 543
           F +M+   + PD  T+  LL+     G  +    +   M +S G  P+    S ++    
Sbjct: 490 FKQMD---VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDL-- 544

Query: 544 ELRLLKYGR-----ESHGYILRNGLDYDLYVGTSLMDMYVKN---DCLQNAQEVFDNMKN 595
                 YGR     E+   I +  +  D  + +SL+    K+   D  + A + F  +  
Sbjct: 545 ------YGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDP 598

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI--KPDLVSWNSL---VSGYSIWGQSK 650
           +N +A+  + + Y   G F+ A  +  +M + ++  +P L SW  +   V  ++  GQ  
Sbjct: 599 KNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGL-SWVEVGKQVHEFTSGGQ-- 655

Query: 651 EALVIIHHMKNSGIYPNVVT 670
                 HH K   I   + T
Sbjct: 656 ------HHPKRQAILSRLET 669


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/720 (32%), Positives = 369/720 (51%), Gaps = 72/720 (10%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           CT + +   G  +H  ++K     D+ L+  ++N YGKC  ++ A K F +   L   + 
Sbjct: 90  CTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAF-DTMQLRSVVS 148

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I    +N +  +AI ++ +M  S       T   +++AC   G    G Q+HG+V+
Sbjct: 149 WTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVI 208

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           KS  + +L   N LISMY++  ++  A+ VF  +   +L SW SMI+ +T LGY   A  
Sbjct: 209 KSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 268

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           LF  M                   F  G YQ               PN      V  A  
Sbjct: 269 LFRDM-------------------FRQGVYQ---------------PNEFIFGSVFSACR 294

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            L   ++GR+  G   + GL  +++ G SL DMY K   L +A+  F  +++ ++V+WN+
Sbjct: 295 SLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNA 354

Query: 604 LISG------------YC---FKGLFVNAKKMLN---------------QMEEEEIKPDL 633
           +I+             +C     GL  +    LN               Q+    IK  L
Sbjct: 355 IIAALANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGL 414

Query: 634 ----VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                  NSL++ Y+      +A  +   +  +G   N+V+W +++S   Q++   E+ +
Sbjct: 415 DKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENG---NLVSWNAILSACSQHKQPGEAFR 471

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            F  M   + KP++ T++++L TC  L  L+ G ++HC  +K+G + D  V+  LIDMY+
Sbjct: 472 LFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYA 531

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           K G LK AR VF  + N  + SW+ +I+G+A +G G+EA+ LF  +   G QP+ +T+  
Sbjct: 532 KCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLG 591

Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           +L+AC + GLVEEGW  +++M  +  I PT EH SCMVDLL +AG L EA +FI+   F 
Sbjct: 592 VLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFD 651

Query: 870 PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
           PD T+W  LL SC+ HG+++ AE A+  + KL+P NSA   L+ N+ A +  W++V RLR
Sbjct: 652 PDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLR 711

Query: 930 HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
           + M ++GV+ V   SWI++   +HVF +E + HP  G IY  L  L  +M   GY P  R
Sbjct: 712 NLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDPCQR 771



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 220/485 (45%), Gaps = 44/485 (9%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y +FG    A+  F +  ++    W+S +  +   G E+ E L ++ ++  +GV 
Sbjct: 221 ALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEI-EALYLFRDMFRQGVY 279

Query: 292 FRSR-ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
             +  I   +   C  L+    G ++     K G   +V   C+L + Y K   + SA +
Sbjct: 280 QPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKR 339

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
            F ++    D + WN II   L N     AI  F +M          T + +L AC    
Sbjct: 340 AFYQIES-PDLVSWNAII-AALANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPM 397

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF-DSMKDHNLSSWNSMI 469
             ++G QIH Y++K  L+   +VCN L++MY++ + L  A  VF D  ++ NL SWN+++
Sbjct: 398 TLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAIL 457

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           S+ +       A+ LF  M  S  +PD IT                              
Sbjct: 458 SACSQHKQPGEAFRLFKLMLFSENKPDNIT------------------------------ 487

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                ++ +L    EL  L+ G + H + +++GL  D+ V   L+DMY K   L++A+ V
Sbjct: 488 -----ITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYV 542

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           FD+ +N +IV+W+SLI GY   GL   A  +   M    ++P+ V++  ++S  S  G  
Sbjct: 543 FDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLV 602

Query: 650 KEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
           +E   + + M+   GI P     + ++    +     E+  F   +++    P+ T   +
Sbjct: 603 EEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENF---IKKTGFDPDITMWKT 659

Query: 709 LLQTC 713
           LL +C
Sbjct: 660 LLASC 664



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 196/446 (43%), Gaps = 63/446 (14%)

Query: 506 GHFTHGSYQNVLT----LLRGMQSLGFRPNGSSVSV-------VLQAVTELRLLKYGRES 554
           G  +  SY N++         + +  F    SS+ +       ++ A T +R LKYG+  
Sbjct: 43  GELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRI 102

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H +IL++    DL +   +++MY K   L++A++ FD M+ R++V+W  +ISGY   G  
Sbjct: 103 HDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQE 162

Query: 615 VNAKKMLNQMEEEEIKPD-----------------------------------LVSWNSL 639
            +A  M  QM      PD                                   L++ N+L
Sbjct: 163 NDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNAL 222

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           +S Y+ +GQ   A  +   +       ++++W S+I+G  Q     E+L  F  M ++ +
Sbjct: 223 ISMYTKFGQIAHASDVFTMISTK----DLISWASMITGFTQLGYEIEALYLFRDMFRQGV 278

Query: 700 -KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            +PN     S+   C  L   + G++I  +C K G  ++ +    L DMY+K G L SA+
Sbjct: 279 YQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAK 338

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
             F +  +  L SWN +I   A   +  EAI  F +++  G  PD ITF  LL AC +  
Sbjct: 339 RAFYQIESPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPM 397

Query: 819 LVEEGWK---YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            + +G +   Y   M  D          + ++ +  K   L +A++  + +    +   W
Sbjct: 398 TLNQGMQIHSYIIKMGLD----KVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSW 453

Query: 876 GALLGSCRIHGHLEYAEIASRRLFKL 901
            A+L +C  H     A     RLFKL
Sbjct: 454 NAILSACSQHKQPGEA----FRLFKL 475



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 151/623 (24%), Positives = 249/623 (39%), Gaps = 114/623 (18%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y + G    A KAF     RS   W+  +  Y   G E   ++ ++ ++   G       
Sbjct: 125 YGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII-MYIQMLRSGYFPDQLT 183

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
              I+K C       LG ++H  +IK G+D  +  + AL++ Y K   +  A+ +F+ +S
Sbjct: 184 FGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMIS 243

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV-KMLQACAKVGAFHEG 415
             +D + W  +I    +      A+ LFR+M        +  I   +  AC  +     G
Sbjct: 244 T-KDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFG 302

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           +QI G   K  L  N+     L  MY++   L  A R F  ++  +L SWN++I++    
Sbjct: 303 RQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALAN- 361

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
             V+ A   F +M    + PD IT+  LL       +  + +TL +GMQ           
Sbjct: 362 SDVNEAIYFFCQMIHMGLMPDDITFLNLLC------ACGSPMTLNQGMQ----------- 404

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM-K 594
                              H YI++ GLD    V  SL+ MY K   L +A  VF ++ +
Sbjct: 405 ------------------IHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISE 446

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD-------------LVSW----- 636
           N N+V+WN+++S          A ++   M   E KPD             LVS      
Sbjct: 447 NGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQ 506

Query: 637 -----------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
                            N L+  Y+  G  K A  +    +N    P++V+W+SLI G  
Sbjct: 507 VHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQN----PDIVSWSSLIVGYA 562

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH-CLCLKNGFIKDA 738
           Q    +E+L  F  M+   ++PN  T   +L  C  +GL++ G  ++  + ++ G     
Sbjct: 563 QFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTR 622

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
              + ++D+ +++G L  A    +K                                  T
Sbjct: 623 EHVSCMVDLLARAGCLYEAENFIKK----------------------------------T 648

Query: 799 GFQPDAITFTALLAACKNSGLVE 821
           GF PD   +  LLA+CK  G V+
Sbjct: 649 GFDPDITMWKTLLASCKTHGNVD 671



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 8/246 (3%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           +T IL  C +L++  +G +VH   +K G   DV +   L++ Y KC  ++ A  +F    
Sbjct: 488 ITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQ 547

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +  D + W+ +I+   +    + A+ LFR M+    +    T + +L AC+ +G   EG 
Sbjct: 548 N-PDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGW 606

Query: 417 QIHGYV-LKSALESNLSVCNCLISMYSRNNKL-ELATRVFDSMKDHNLSSWNSMISSYTG 474
            ++  + ++  +       +C++ + +R   L E    +  +  D +++ W ++++S   
Sbjct: 607 HLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKT 666

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTHGSYQNVLTLLRGMQSLGFR--PN 531
            G VD+A       N  ++ P       LLS  H + G+++ V  L   M+ +G +  P 
Sbjct: 667 HGNVDIAERAAE--NILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPG 724

Query: 532 GSSVSV 537
            S + V
Sbjct: 725 QSWIEV 730


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/812 (29%), Positives = 406/812 (50%), Gaps = 82/812 (10%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS-RSYADWSSFLEDYESFG 272
           H Q+I  G    SD  + +++ +     D    A+  F     ++   WSS +  Y S  
Sbjct: 50  HGQIIVSG--LQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMY-SQQ 106

Query: 273 GEVQELLEVWGELHGK-GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G  +E L V+ +L  K G      +L  +++ CT+L     G ++H  +++ GFD DV++
Sbjct: 107 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 166

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             +L++FY K  ++E A  +F ++S+ +  + W  II    +  +   +++LF +M+ ++
Sbjct: 167 GTSLIDFYSKNGNIEEARLVFDQLSE-KTAVTWTTIIAGYTKCGRSAVSLELFAQMRETN 225

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                  +  +L AC+ +     GKQIH YVL+   E ++SV N LI  Y++ N+++   
Sbjct: 226 VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 285

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           ++FD M   N+ SW +MIS Y    +   A  LF +MN                      
Sbjct: 286 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN---------------------- 323

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                         LG++P+G + + VL +      L+ GR+ H Y ++  L+ D +V  
Sbjct: 324 -------------RLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKN 370

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            L+DMY K++ L +A++VFD M  +N++++N++I GY  +     A ++ ++M      P
Sbjct: 371 GLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPP 430

Query: 632 -----------------------------------DLVSWNSLVSGYSIWGQSKEALVII 656
                                              DL + ++L+  YS     K+A  + 
Sbjct: 431 SLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVF 490

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
             M       ++V W ++  G  Q+    E+LK +  +Q    KPN  T ++L+     L
Sbjct: 491 EEMNEK----DIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNL 546

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
             L++G++ H   +K G     +V   L+DMY+K G+++ AR++F  S  + +  WN MI
Sbjct: 547 ASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMI 606

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
              A +G  +EA+ +F E+++ G QP+ +TF A+L+AC ++G VE+G  +F+SM   + I
Sbjct: 607 STHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGI 665

Query: 837 IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
            P  EHY+C+V LLG++G L EA +FI  MP +P A +W +LL +CRI G++E  + A+ 
Sbjct: 666 KPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAE 725

Query: 897 RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
                +P +S +Y L+ N+ A    W DV+++R  MD   V      SWI+++  V+VF 
Sbjct: 726 MAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFI 785

Query: 957 AEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
           A    H    +I   L  L+  +K  GYVPD 
Sbjct: 786 ARDTTH-READIGSVLDILIQHIKGAGYVPDA 816



 Score =  224 bits (570), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 166/658 (25%), Positives = 299/658 (45%), Gaps = 75/658 (11%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H  +I  G   D  L   L+N   K   V++A  +F ++   ++ + W+ ++ +  +  
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPH-KNLITWSSMVSMYSQQG 107

Query: 376 KWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
             E A+ +F ++Q  S +  +   +  +++AC ++G   +G Q+HG+V++S  + ++ V 
Sbjct: 108 YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 167

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
             LI  YS+N  +E A  VFD + +    +W ++I+ YT  G   V+  LF +M  + + 
Sbjct: 168 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV 227

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
           PD                                      VS VL A + L  L+ G++ 
Sbjct: 228 PDRYV-----------------------------------VSSVLSACSMLEFLEGGKQI 252

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H Y+LR G + D+ V   L+D Y K + ++  +++FD M  +NI++W ++ISGY      
Sbjct: 253 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFD 312

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSL---------------VSGYSIWGQ------SKEAL 653
             A K+  +M     KPD  +  S+               V  Y+I          K  L
Sbjct: 313 WEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGL 372

Query: 654 VIIHHMKNSGI----------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
           + ++   N  I            NV+++ ++I G    E   E+L+ F +M+     P+ 
Sbjct: 373 IDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSL 432

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
            T  SLL     L  L+  K+IH L +K G   D +  + LID+YSK   +K AR VF +
Sbjct: 433 LTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEE 492

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              K +  WN M  G+  +   +EA+ L+  L  +  +P+  TF AL+ A  N   +  G
Sbjct: 493 MNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG 552

Query: 824 WKYFDSM-STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            ++ + +     +  P + +   +VD+  K G ++EA     +  ++ D   W +++ + 
Sbjct: 553 QQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWR-DVVCWNSMISTH 609

Query: 883 RIHGHLEYAEIASRRLFK--LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
             HG  E A    R + K  ++P N   +  +++  + + R ED     +SM   G+K
Sbjct: 610 AQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIK 666



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 247/524 (47%), Gaps = 67/524 (12%)

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           +Q  + +   R    +LQ           K IHG ++ S L+S+  + N LI++ S++++
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++ A  VFD M   NL +W+SM+S Y+  GY + A  +F  +                  
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQ----------------- 120

Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
                            +  G  PN   ++ V++A T+L +++ G + HG+++R+G D D
Sbjct: 121 -----------------RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD 163

Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           +YVGTSL+D Y KN  ++ A+ VFD +  +  V W ++I+GY   G    + ++  QM E
Sbjct: 164 VYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRE 223

Query: 627 EEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMK--------------------- 660
             + PD    +S++S  S+      G+   A V+    +                     
Sbjct: 224 TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 283

Query: 661 -----NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                +  +  N+++WT++ISG +QN    E++K F +M +   KP+    +S+L +CG 
Sbjct: 284 GRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGS 343

Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
              L+ G+++H   +K     D +V  GLIDMY+KS  L  A++VF   A + + S+N M
Sbjct: 344 REALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAM 403

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
           I G++      EA+ LFHE+    F P  +TF +LL     S    E  K    +   + 
Sbjct: 404 IEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSA-SLFALELSKQIHGLIIKFG 462

Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           +   +   S ++D+  K  Y+ +A      M  K D  +W A+ 
Sbjct: 463 VSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMF 505



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 214/507 (42%), Gaps = 107/507 (21%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           +Q    RP     + +LQ       + + +  HG I+ +GL  D ++   L+++  K+D 
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAKKMLNQMEEEEI------ 629
           + NA+ VFD M ++N++ W+S++S Y  +G       +FV+ ++   +   E +      
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 630 -----------------------KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                                    D+    SL+  YS  G  +EA ++   +       
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK---- 193

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
             VTWT++I+G  +      SL+ F QM++ ++ P+   +SS+L  C  L  L+ GK+IH
Sbjct: 194 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 253

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
              L+ G   D  V   LID Y+K   +K+ R++F +   K + SW  MI G+       
Sbjct: 254 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 313

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW---------------------- 824
           EA+ LF E+   G++PD    T++L +C +   +E+G                       
Sbjct: 314 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 373

Query: 825 -------------KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF---IRTMPF 868
                        K FD M+ + N+I     Y+ M++       L EA +    +R   F
Sbjct: 374 DMYAKSNLLIDAKKVFDVMA-EQNVIS----YNAMIEGYSSQEKLSEALELFHEMRVRLF 428

Query: 869 KPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN-----YNLMMNLLAMS---- 919
            P    + +LLG              S  LF LE     +     + + ++L A S    
Sbjct: 429 PPSLLTFVSLLG-------------VSASLFALELSKQIHGLIIKFGVSLDLFAGSALID 475

Query: 920 --NRWEDVERLRHSMDEVGVKSVLVWS 944
             ++   V+  RH  +E+  K ++VW+
Sbjct: 476 VYSKCSYVKDARHVFEEMNEKDIVVWN 502



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 230/481 (47%), Gaps = 30/481 (6%)

Query: 206 CLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
            L   +  HA  IK      SD+ VK+ LI  Y +      A K F +   ++   +++ 
Sbjct: 346 ALEQGRQVHAYTIKAN--LESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAM 403

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIK 322
           +E Y S   ++ E LE++ E+  +  +F   +LT +  L +   L A  L  ++H  +IK
Sbjct: 404 IEGYSS-QEKLSEALELFHEMRVR--LFPPSLLTFVSLLGVSASLFALELSKQIHGLIIK 460

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
            G   D+    AL++ Y KC  V+ A  +F E+++ +D ++WN +     ++ + E A+K
Sbjct: 461 FGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE-KDIVVWNAMFFGYTQHLENEEALK 519

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           L+  +QFS  K    T   ++ A + + +   G+Q H  ++K  L+    V N L+ MY+
Sbjct: 520 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 579

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +   +E A ++F+S    ++  WNSMIS++   G  + A  +F +M    IQP+ +T+  
Sbjct: 580 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 639

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR--ESHGYILR 560
           +LS     G  ++ L     M   G +P     + V+       L + G+  E+  +I +
Sbjct: 640 VLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSL-----LGRSGKLFEAKEFIEK 694

Query: 561 NGLDYDLYVGTSLMD---MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
             ++    V  SL+    +    +  + A E+  +   ++  ++  L + +  KG++ + 
Sbjct: 695 MPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADV 754

Query: 618 KKMLNQMEEEE-IKPDLVSWNSLVSGYSIW----GQSKEA------LVIIHHMKNSGIYP 666
           KK+ ++M+  E +K    SW  + +  +++       +EA       ++I H+K +G  P
Sbjct: 755 KKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREADIGSVLDILIQHIKGAGYVP 814

Query: 667 N 667
           +
Sbjct: 815 D 815


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Glycine max]
          Length = 765

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 224/720 (31%), Positives = 349/720 (48%), Gaps = 88/720 (12%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            R+   + + C  +GA  +GK  H  + + A  SN  + NC++ MY        A R FD 
Sbjct: 93   RSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILKMYCDCKSFTSAERFFDK 151

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            + D +LSSW++                                   ++S +   G     
Sbjct: 152  IVDQDLSSWST-----------------------------------IISAYTEEGRIDEA 176

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
            + L   M  LG  PN S  S ++ + T+  +L  G++ H  ++R G   ++ + T + +M
Sbjct: 177  VRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNM 236

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---- 632
            YVK   L  A+   + M  +N VA   L+ GY       +A  +  +M  E ++ D    
Sbjct: 237  YVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVF 296

Query: 633  ------LVSWNSLVSGYSI----------------------------WGQSKEALVIIHH 658
                    +   L +G  I                            +  +++A   IH 
Sbjct: 297  SIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHE 356

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                   PN  +W++LI+G  Q+  +  +L+ F  ++ + +  NS   +++ Q C  +  
Sbjct: 357  -------PNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSD 409

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            L  G +IH   +K G +      + +I MYSK G +  A + F         +W  +I  
Sbjct: 410  LICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICA 469

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
             A +G   EA+ LF E+  +G +P+A+TF  LL AC +SGLV+EG K  DSMS +Y + P
Sbjct: 470  HAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNP 529

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
            TI+HY+CM+D+  +AG L EA + IR++PF+PD   W +LLG C  H +LE   IA+  +
Sbjct: 530  TIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNI 589

Query: 899  FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
            F+L+P +SA Y +M NL A++ +W++  + R  M E  ++  +  SWI +   VH F   
Sbjct: 590  FRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVG 649

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD---IDEEEKGKVLLSHTEKLAIVY 1015
               HP T +IY +L  L    KK       R + ++    D  E+ + LL H+E+LAI Y
Sbjct: 650  DRHHPQTEQIYSKLKELNFSFKK----SKERLLNEENALCDFTERKEQLLDHSERLAIAY 705

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ T +  PI V KNTR C DCH  AK +S+V GRE+ +RDG RFHH   GECSC D W
Sbjct: 706  GLICTAADTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/497 (21%), Positives = 222/497 (44%), Gaps = 42/497 (8%)

Query: 219 KMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQE 277
           ++ ++ NS+  + + I   Y +   FTSA + F     +  + WS+ +  Y    G + E
Sbjct: 117 RLQRMANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTE-EGRIDE 175

Query: 278 LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMN 337
            + ++  +   G+   S I + ++   T      LG ++H+ LI+ GF  ++ ++  + N
Sbjct: 176 AVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISN 235

Query: 338 FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
            Y KC  ++ A    ++++  ++ +    +++   +  +  +A+ LF +M     +    
Sbjct: 236 MYVKCGWLDGAEVATNKMTR-KNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGF 294

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
               +L+ACA +G  + GKQIH Y +K  LES +SV   L+  Y +  + E A + F+S+
Sbjct: 295 VFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESI 354

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            + N  SW+++I+ Y   G  D A  +F                                
Sbjct: 355 HEPNDFSWSALIAGYCQSGQFDRALEVF-------------------------------- 382

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
              + ++S G   N    + + QA + +  L  G + H   ++ GL   L   ++++ MY
Sbjct: 383 ---KAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMY 439

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            K   +  A + F  +   + VAW ++I  + + G    A ++  +M+   ++P+ V++ 
Sbjct: 440 SKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFI 499

Query: 638 SLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
            L++  S  G  KE   I+  M +  G+ P +  +  +I    +    +E+L+    +  
Sbjct: 500 GLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPF 559

Query: 697 EDIKPNSTTMSSLLQTC 713
           E   P+  +  SLL  C
Sbjct: 560 E---PDVMSWKSLLGGC 573



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 182/400 (45%), Gaps = 42/400 (10%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H+Q+I++G  + ++  +++LI + Y++ G    A  A      ++    +  +  Y 
Sbjct: 212 KQIHSQLIRIG--FAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYT 269

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
                   LL ++G++  +GV     + +IILK C  L   + G ++H+  IK G + +V
Sbjct: 270 KAARNRDALL-LFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEV 328

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +   L++FY KC   E+A + F  + +  +D  W+ +I    ++ +++ A+++F+ ++ 
Sbjct: 329 SVGTPLVDFYVKCARFEAARQAFESIHE-PNDFSWSALIAGYCQSGQFDRALEVFKAIRS 387

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                 S     + QAC+ V     G QIH   +K  L + LS  + +ISMYS+  +++ 
Sbjct: 388 KGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDY 447

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A + F ++   +  +W ++I ++   G    A  LF +M  S ++P+ +T+  LL+    
Sbjct: 448 AHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSH 507

Query: 510 HGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
            G  +    +L  M    G  P                                   D Y
Sbjct: 508 SGLVKEGKKILDSMSDEYGVNPT---------------------------------IDHY 534

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISG 607
               ++D+Y +   LQ A EV  ++    ++++W SL+ G
Sbjct: 535 --NCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 3/207 (1%)

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG 733
           LIS + Q  N RE  +F   M +  I  N  +   L + CG LG L +GK  H   L+  
Sbjct: 64  LISLAKQG-NLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNR-LQRM 121

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
              + ++   ++ MY    +  SA   F K  ++ L+SW+ +I  +   G   EA+ LF 
Sbjct: 122 ANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFL 181

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
            +L+ G  P++  F+ L+ +  +  +++ G K   S          I   + + ++  K 
Sbjct: 182 RMLDLGITPNSSIFSTLIMSFTDPSMLDLG-KQIHSQLIRIGFAANISIETLISNMYVKC 240

Query: 854 GYLDEAWDFIRTMPFKPDATIWGALLG 880
           G+LD A      M  K      G ++G
Sbjct: 241 GWLDGAEVATNKMTRKNAVACTGLMVG 267


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/823 (28%), Positives = 400/823 (48%), Gaps = 77/823 (9%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
            +L+  Y   G  + A + F+    R+   W++ +    S  G ++E L  + ++   GV 
Sbjct: 84   ALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS-NGYLEEALRAYRQMRRDGVP 142

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
              +     ++ LC  L     G++V + +I  G    V +  +L+  +G    V  A KL
Sbjct: 143  CNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKL 202

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F  + +  D + WN +I +            +F +M+    +  + T+  ++  CA    
Sbjct: 203  FDRMEE-HDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDH 261

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
            F  G  IH   L+S+L+S+++V N L++MYS   KL  A  +F                 
Sbjct: 262  FSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF----------------- 304

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                      W++  +        D+I+WN ++S +  + +  + L  L  +      PN
Sbjct: 305  ----------WNMSRR--------DLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPN 346

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
              + S  L A +    L  G+  H  +L+  L  +L VG SL+ MY K + +++A++VF 
Sbjct: 347  HLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQ 406

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--------------- 636
            +M   +IV++N LI GY        A ++ + M    IKP+ ++                
Sbjct: 407  SMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHN 466

Query: 637  ---------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                                 NSL++ Y+  G  + +  I + + N     N+V+W ++I
Sbjct: 467  YGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK----NIVSWNAII 522

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            + ++Q  +  E+LK FI MQ    K +   ++  L +C  L  L+ G ++H L +K+G  
Sbjct: 523  AANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLD 582

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             D+YV    +DMY K G +    +V    A +    WN +I G+A YG  KEA   F ++
Sbjct: 583  SDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQM 642

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
            + TG +PD +TF ALL+AC ++GLV++G  Y++SM++ + + P I+H  C+VDLLG+ G 
Sbjct: 643  VATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGR 702

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
              EA  FI  MP  P+  IW +LL S R H +LE     +++L +L+P + + Y L+ NL
Sbjct: 703  FAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNL 762

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A + RW DV++LR  M  + +      SW+++   V  F      H    +IY +L  +
Sbjct: 763  YATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEM 822

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
            + +++++GY+ DT     D DEE+K + L +H+EKLA+ YGL+
Sbjct: 823  LLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 865



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 279/595 (46%), Gaps = 36/595 (6%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  +HA   + G   +V++  AL++ YG    V  A +LF E+ +  + + W  +++   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPE-RNVVSWTALMVALS 121

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            N   E A++ +R+M+       +     ++  C  +     G Q+   V+ S L++ +S
Sbjct: 122 SNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVS 181

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N LI+M+    ++  A ++FD M++H+  SWN+MIS Y+  G     + +F+ M    
Sbjct: 182 VANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHG 241

Query: 493 IQPDIITWN-----CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           ++PD  T       C  S HF+HGS         G+ SL  R +  S   V+ A+  +  
Sbjct: 242 LRPDATTLCSLMSVCASSDHFSHGS---------GIHSLCLRSSLDSSVTVINALVNMYS 292

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN----DCLQNAQEVFDNMKNRNIVAWNS 603
                    ++  N    DL    +++  YV+N    D L+   ++F   ++ N + ++S
Sbjct: 293 AAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSS 352

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
            +      G  ++ K +   + +  ++ +L+  NSL++ Y      ++A  +   M    
Sbjct: 353 ALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH- 411

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN-G 722
              ++V++  LI G    E+  ++++ F  M+   IKPN  TM ++  +      L N G
Sbjct: 412 ---DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYG 468

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           + +H   ++ GF+ D YVA  LI MY+K GNL+S+  +F    NK + SWN +I      
Sbjct: 469 RPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQL 528

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF-----DSMSTDYNII 837
           G+G+EA+ LF ++   G + D +     L++C +   +EEG +         + +D  ++
Sbjct: 529 GHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVV 588

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
                 +  +D+ GK G +DE    +     +P    W  L+     +G+ + AE
Sbjct: 589 ------NAAMDMYGKCGKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKYGYFKEAE 636



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 114/566 (20%), Positives = 231/566 (40%), Gaps = 78/566 (13%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEGKQIHG 420
           W   +   +R  +   A ++ R M+          +  ++ AC + G       G  IH 
Sbjct: 9   WYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHA 68

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
              ++ L  N+ +   L+ +Y     +  A R+F  M + N+ SW +++ + +  GY++ 
Sbjct: 69  LTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEE 128

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
           A                                   L   R M+  G   N ++ + V+ 
Sbjct: 129 A-----------------------------------LRAYRQMRRDGVPCNANAFATVVS 153

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
               L     G +    ++ +GL   + V  SL+ M+     + +A+++FD M+  + ++
Sbjct: 154 LCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTIS 213

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------ 636
           WN++IS Y  +G+      + + M    ++PD  +                         
Sbjct: 214 WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCL 273

Query: 637 -----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
                      N+LV+ YS  G+  +A  +  +M       ++++W ++IS  +QN N  
Sbjct: 274 RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR----DLISWNTMISSYVQNCNST 329

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           ++LK   Q+   +  PN  T SS L  C   G L +GK +H + L+    ++  V   LI
Sbjct: 330 DALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLI 389

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
            MY K  +++ A +VF+      + S+N +I G+A+  +G +A+ +F  +   G +P+ I
Sbjct: 390 TMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYI 449

Query: 806 TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
           T   +  +  +S  +    +   +       +      + ++ +  K G L+ + +   +
Sbjct: 450 TMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 509

Query: 866 MPFKPDATIWGALLGSCRIHGHLEYA 891
           +  K +   W A++ +    GH E A
Sbjct: 510 ITNK-NIVSWNAIIAANVQLGHGEEA 534



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 179/416 (43%), Gaps = 36/416 (8%)

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL---RLLKYGRESH 555
           TW   +SG    G       +LRGM+  G   +G +++ ++ A         +  G   H
Sbjct: 8   TWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIH 67

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
               R GL  ++Y+GT+L+ +Y     + +AQ +F  M  RN+V+W +L+      G   
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLE 127

Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVS-----GYSIWGQSKEALVIIHHMKNSGIYPN--- 667
            A +   QM  + +  +  ++ ++VS        + G    + VI+  ++N     N   
Sbjct: 128 EALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLI 187

Query: 668 -----------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
                                   ++W ++IS         +    F  M+   ++P++T
Sbjct: 188 TMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDAT 247

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           T+ SL+  C       +G  IH LCL++       V   L++MYS +G L  A  +F   
Sbjct: 248 TLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM 307

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
           + + L SWN MI  +    N  +A+    +L  T   P+ +TF++ L AC + G + +G 
Sbjct: 308 SRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDG- 366

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           K   ++    ++   +   + ++ + GK   +++A    ++MP   D   +  L+G
Sbjct: 367 KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH-DIVSYNVLIG 421


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/781 (29%), Positives = 378/781 (48%), Gaps = 69/781 (8%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
            D +L  +L+  Y +C  +ESA  +F +++  +  +LW  +I   +       AI LF  +
Sbjct: 61   DGYLASSLVYMYLRCGSLESAIDVFHKIAH-KSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                    +   V +L AC+       G+ IH   +++ L     V + L+SMY R   L
Sbjct: 120  LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 448  ELATRVFDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
              A  +F  ++ H ++  WN+MI++ +  G    A  +F +M    I PD++T+  +   
Sbjct: 180  RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
              +  S       LR  Q  GF                          H  +   GL  D
Sbjct: 240  CSSSPS-------LRASQVKGF--------------------------HACLDETGLGSD 266

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC---------------FK 611
            + V T+L++ Y +   +  A++ F  M  RN V+W S+I+ +                 +
Sbjct: 267  VVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLLAVETFHAMLLE 326

Query: 612  GLFVNAKKMLNQME----------------EEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
            G+      +   +E                E  +  D+     LV  Y+     ++A+ +
Sbjct: 327  GVVPTRSTLFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRV 386

Query: 656  IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                +  G +   +  T++I+   Q  + R + K +    +  I P+     + L  C  
Sbjct: 387  FS-AREEGEWDAALV-TAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACAS 444

Query: 716  LGLLQNGKEIH-CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
            L  L  G++IH C+       +D  +   ++ MY + G+L+ AR+ F     +   SWN 
Sbjct: 445  LAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNA 504

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
            M+   A +G  ++   LF  +L+ GF  + I F  LL+AC ++GLV+ G ++F +M+ D+
Sbjct: 505  MLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDH 564

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             ++P  EHY CMVDLLG+ G L +A   ++ MP  PDA  W AL+G+CRI+G  E    A
Sbjct: 565  GVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFA 624

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
            + R+ +L   ++A Y  + N+ + + RW+D   +R  M ++G++ +   S I+I   VH 
Sbjct: 625  AERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHE 684

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F      HP +  IY EL  ++  +++ GY   T  V  D++EE+K ++L  H+EKLAI 
Sbjct: 685  FVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIA 744

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +G+M T   + +RVIKN RVC DCH A+K++S V GREI +RD  RFHHF++G CSC D 
Sbjct: 745  FGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDY 804

Query: 1075 W 1075
            W
Sbjct: 805  W 805



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/581 (20%), Positives = 235/581 (40%), Gaps = 26/581 (4%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +  SL++ YL  G   SA   F     +S   W+  +  Y S G     +  ++  +  +
Sbjct: 64  LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAI-ALFHRILQE 122

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
           G+   + +   +L  C+       G  +H   ++ G      +  AL++ YG+C  +  A
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
           N LF  +    D +LWN +I    +N     A+++F  M          T V + +AC+ 
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242

Query: 409 VGAFHEG--KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +      K  H  + ++ L S++ V   L++ Y+R  +++ A + F  M + N  SW 
Sbjct: 243 SPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWT 302

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QS 525
           SMI+++T +G++ +A   F+ M    + P   T    L G         V  L+  + Q 
Sbjct: 303 SMIAAFTQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEG----CEDLRVARLVEAIAQE 357

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL--RNGLDYDLYVGTSLMDMYVKNDCL 583
           +G   + + V+ ++ A         G+E    +   R   ++D  + T+++ +Y +    
Sbjct: 358 IGVVTDVAIVTDLVMAYARCD----GQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDR 413

Query: 584 QNAQEVFDNMKNRN-----IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           ++  +++     R      I+   +L +      L    +       +  +  D+   N+
Sbjct: 414 RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNA 473

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           +VS Y   G  ++A      M       + ++W +++S S Q+    +    F  M QE 
Sbjct: 474 IVSMYGQCGSLRDARDAFDGMPAR----DEISWNAMLSASAQHGRVEDCCDLFRAMLQEG 529

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
                    +LL  C   GL++ G E    +   +G +        ++D+  + G L  A
Sbjct: 530 FDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADA 589

Query: 758 REVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             + +        A+W  ++    IYG+ +        +LE
Sbjct: 590 HGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLE 630



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 149/364 (40%), Gaps = 33/364 (9%)

Query: 153 TSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKS 212
           T+ +QN    +   I      L +PP         L    S F   + +   R  S VK 
Sbjct: 203 TANSQNGSPREALEIFYRMLQLGIPP--------DLVTFVSVFKACSSSPSLRA-SQVKG 253

Query: 213 KHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
            HA + + G    SD +V + L+  Y   G+   A K F     R+   W+S +  +   
Sbjct: 254 FHACLDETG--LGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQI 311

Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G  +   +E +  +  +GV+     L   L+ C  L    L VE  A  I  G   DV +
Sbjct: 312 GHLLA--VETFHAMLLEGVVPTRSTLFAALEGCEDLRVARL-VEAIAQEI--GVVTDVAI 366

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
              L+  Y +C   E A ++FS   + E D  L   +I V  +     +  KL+      
Sbjct: 367 VTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLW------ 420

Query: 391 SAKAISRTI-------VKMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYS 442
              AI R I       +  L ACA + A  EG+QIH  V     L+ ++++ N ++SMY 
Sbjct: 421 -GAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYG 479

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +   L  A   FD M   +  SWN+M+S+    G V+    LF  M       + I +  
Sbjct: 480 QCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLN 539

Query: 503 LLSG 506
           LLS 
Sbjct: 540 LLSA 543



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           +D Y+A+ L+ MY + G+L+SA +VF K A+K++  W  +I  +   G+   AI LFH +
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
           L+ G   DAI F ++L+AC +   +  G +     + +  +       S +V + G+ G 
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAG-RLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178

Query: 856 LDEAWDFIRTMPFKPDATIWGALL 879
           L +A      +    D  +W A++
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMI 202


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Glycine max]
          Length = 591

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/561 (36%), Positives = 306/561 (54%), Gaps = 41/561 (7%)

Query: 552  RESHGYILRNGLDYD-LYVGTSLMDMYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            ++ H + +R+G+  +   +G  L+   V  +  +  A  VF  + N N+  WN++I GY 
Sbjct: 35   KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYA 94

Query: 610  --------------------------FKGLFVNAKKMLNQMEEEEIKPDLVS-------- 635
                                      +  L     K LN  E E I    +         
Sbjct: 95   ESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVF 154

Query: 636  -WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
              NSL+  Y+  G ++ A  +   MK      ++V W S+I+G   N    E+L  F +M
Sbjct: 155  VQNSLLHIYAACGDTESAYKVFELMKER----DLVAWNSMINGFALNGRPNEALTLFREM 210

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
              E ++P+  T+ SLL     LG L+ G+ +H   LK G  K+++V   L+D+Y+K G +
Sbjct: 211  SVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAI 270

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            + A+ VF + + +   SW  +I+G A+ G G+EA+ LF E+   G  P  ITF  +L AC
Sbjct: 271  REAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYAC 330

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
             + G+++EG++YF  M  +  IIP IEHY CMVDLL +AG + +A+++I+ MP +P+A I
Sbjct: 331  SHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVI 390

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            W  LLG+C IHGHL   EIA   L  LEP +S +Y L+ NL A   RW DV+ +R SM +
Sbjct: 391  WRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLK 450

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
             GVK    +S +++   V+ F+     HP + ++Y  L  +   +K  GYVP T  V  D
Sbjct: 451  DGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLAD 510

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
            I+EEEK + L  H+EK+AI + L+ T    PIRV+KN RVC+DCH A K ++ +  REI 
Sbjct: 511  IEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIV 570

Query: 1055 LRDGARFHHFREGECSCNDCW 1075
            +RD +RFHHFR G CSC D W
Sbjct: 571  IRDRSRFHHFRGGSCSCKDYW 591



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 188/423 (44%), Gaps = 43/423 (10%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           WN II     ++    A   +R+M  S  +  + T   +L+A +K     EG+ IH   +
Sbjct: 86  WNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTI 145

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           ++  ES + V N L+ +Y+     E A +VF+ MK+ +L +WNSMI+ +   G  + A +
Sbjct: 146 RNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALT 205

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           LF +M+   ++PD                                   G +V  +L A  
Sbjct: 206 LFREMSVEGVEPD-----------------------------------GFTVVSLLSASA 230

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
           EL  L+ GR  H Y+L+ GL  + +V  SL+D+Y K   ++ AQ VF  M  RN V+W S
Sbjct: 231 ELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTS 290

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS- 662
           LI G    G    A ++  +ME + + P  +++  ++   S  G   E       MK   
Sbjct: 291 LIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEEC 350

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC---GGLGLL 719
           GI P +  +  ++    +    +++ ++   +Q   ++PN+    +LL  C   G LGL 
Sbjct: 351 GIIPRIEHYGCMVDLLSRAGLVKQAYEY---IQNMPVQPNAVIWRTLLGACTIHGHLGLG 407

Query: 720 QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
           +  +  H L L+     D  + + L     +  +++  R    K   K    ++ + +G 
Sbjct: 408 EIARS-HLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGN 466

Query: 780 AIY 782
            +Y
Sbjct: 467 RVY 469



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 6/299 (2%)

Query: 206 CLSS---VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEF-GDFTSAAKAFFLYFSRSYADW 261
           C SS   +K  HA  I+ G   N+ DM K LIF  +      + A   F +  + +   W
Sbjct: 27  CASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTW 86

Query: 262 SSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           ++ +  Y          L  + ++    V   +     +LK  +K +    G  +H+  I
Sbjct: 87  NTIIRGYAESDNPSPAFL-FYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTI 145

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
           + GF+  V ++ +L++ Y  C D ESA K+F E+    D + WN +I     N +   A+
Sbjct: 146 RNGFESLVFVQNSLLHIYAACGDTESAYKVF-ELMKERDLVAWNSMINGFALNGRPNEAL 204

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            LFREM     +    T+V +L A A++GA   G+++H Y+LK  L  N  V N L+ +Y
Sbjct: 205 TLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLY 264

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           ++   +  A RVF  M + N  SW S+I      G+ + A  LF +M    + P  IT+
Sbjct: 265 AKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITF 323



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 191/453 (42%), Gaps = 78/453 (17%)

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           + +LQ CA   + H+ KQIH + ++  +              S NN           M  
Sbjct: 21  ISLLQFCAS--SKHKLKQIHAFSIRHGV--------------SLNNP---------DMGK 55

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
           H + +   ++S    + Y   A+++F  +++    P++ TWN ++ G+    +       
Sbjct: 56  HLIFT---IVSLSAPMSY---AYNVFTVIHN----PNVFTWNTIIRGYAESDNPSPAFLF 105

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
            R M      P+  +   +L+A+++   ++ G   H   +RNG +  ++V  SL+ +Y  
Sbjct: 106 YRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAA 165

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---LVSW 636
               ++A +VF+ MK R++VAWNS+I+G+   G    A  +  +M  E ++PD   +VS 
Sbjct: 166 CGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSL 225

Query: 637 --------------------------------NSLVSGYSIWGQSKEALVIIHHMKNSGI 664
                                           NSL+  Y+  G  +EA  +   M     
Sbjct: 226 LSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSER-- 283

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
             N V+WTSLI G   N    E+L+ F +M+ + + P+  T   +L  C   G+L  G E
Sbjct: 284 --NAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFE 341

Query: 725 -IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIY 782
               +  + G I        ++D+ S++G +K A E  +          W  ++    I+
Sbjct: 342 YFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIH 401

Query: 783 GN-GKEAILLFHEL-LETGFQPDAITFTALLAA 813
           G+ G   I   H L LE     D +  + L A+
Sbjct: 402 GHLGLGEIARSHLLNLEPKHSGDYVLLSNLYAS 434



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 123/315 (39%), Gaps = 54/315 (17%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGF-IKDAYVATGLI-DMYSKSGNLKSAREVFRKSA 765
           SLLQ C         K+IH   +++G  + +  +   LI  + S S  +  A  VF    
Sbjct: 22  SLLQFCASSK--HKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIH 79

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
           N  + +WN +I G+A   N   A L + +++ +  +PD  T+  LL A   S  V EG  
Sbjct: 80  NPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEA 139

Query: 826 Y--------FDSM-----------------STDYNIIPTIEH-----YSCMVDLLGKAGY 855
                    F+S+                  + Y +   ++      ++ M++     G 
Sbjct: 140 IHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGR 199

Query: 856 LDEAWDFIRTMP---FKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC-NSANYNL 911
            +EA    R M     +PD     +LL +    G LE        L K+    NS   N 
Sbjct: 200 PNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNS 259

Query: 912 MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
           +++L A      + +R+   M E   ++ + W+ + +   V+ F          GE   E
Sbjct: 260 LLDLYAKCGAIREAQRVFSEMSE---RNAVSWTSLIVGLAVNGF----------GEEALE 306

Query: 972 LYHLVSEMKKLGYVP 986
           L+    EM+  G VP
Sbjct: 307 LF---KEMEGQGLVP 318


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
            [Vitis vinifera]
          Length = 594

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/578 (36%), Positives = 319/578 (55%), Gaps = 39/578 (6%)

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
            S +  +LQ+    R    G   H  I+R GL  D      LM+MY K   +++A+++FD 
Sbjct: 21   SELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDE 80

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------------------------- 627
            M  R++V+WN+++  +   G    A  +  QM++E                         
Sbjct: 81   MPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC 140

Query: 628  ----------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                       +  ++    +L+  Y+  G  K+A ++   M       + VTW+S+++G
Sbjct: 141  KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPER----SDVTWSSMVAG 196

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             +QNE Y E+L  F + Q   ++ N  T+SS L  C     L  GK++  +  K G   +
Sbjct: 197  YVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSN 256

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
             +V + LIDMY+K G ++ A  VF     K +  WN ++ GF+ +    EA++ F ++ +
Sbjct: 257  IFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQ 316

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G  P+ IT+ ++L+AC + GLVE+G KYFD M   +N+ P + HYSCMVD+LG+AG L 
Sbjct: 317  MGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLH 376

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            EA DFI  MPF   A++WG+LL SCRI+ +LE AE+A++ LF++EP N+ N+ L+ N+ A
Sbjct: 377  EAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYA 436

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             ++RWE+V R R+ + E   K     SWI+I   VH F      HP   EIY +L  LV 
Sbjct: 437  ANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVG 496

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            EMKK+GY   T     D++E  K ++L  H+EKLA+ +G+M     APIR++KN R+C D
Sbjct: 497  EMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGD 556

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH+  K  S +  REI +RD  RFHHF+ G CSC + W
Sbjct: 557  CHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 175/364 (48%), Gaps = 37/364 (10%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G+  HA +I+ G   D      LMN Y KC  VESA KLF E+  +   + WN ++    
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP-VRSLVSWNTMVGSHT 97

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +N   E A+ LF +MQ         T+  ++ ACA      E KQ+HG+ LK+AL+SN+ 
Sbjct: 98  QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 157

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V   L+ +Y++   ++ A  VF+ M + +  +W+SM++ Y                    
Sbjct: 158 VGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGY-------------------- 197

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           +Q ++               Y+  L L    Q++G   N  ++S  L A      L  G+
Sbjct: 198 VQNEL---------------YEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 242

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           +      + G+  +++V +SL+DMY K   ++ A  VF +++ +N+V WN+++SG+    
Sbjct: 243 QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHV 302

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
             + A     +M++  I P+ +++ S++S  S  G  ++       M +   + PNV+ +
Sbjct: 303 RSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHY 362

Query: 672 TSLI 675
           + ++
Sbjct: 363 SCMV 366



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 188/420 (44%), Gaps = 76/420 (18%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ+ A+  A  EG   H  +++  L ++    N L++MYS+   +E A ++FD M   +
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           L SWN+M+ S+T                                    +G  +  L L  
Sbjct: 86  LVSWNTMVGSHT-----------------------------------QNGDCEKALVLFM 110

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            MQ  G   +  +VS V+ A      +   ++ HG+ L+  LD +++VGT+L+D+Y K  
Sbjct: 111 QMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCG 170

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME---------------- 625
            +++A  VF+ M  R+ V W+S+++GY    L+  A  + ++ +                
Sbjct: 171 LVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALS 230

Query: 626 -------------------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                              +  I  ++   +SL+  Y+  G  +EA  +   ++      
Sbjct: 231 ACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEE----K 286

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           NVV W +++SG  ++    E++ +F +MQQ  I PN  T  S+L  C  LGL++ G++  
Sbjct: 287 NVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYF 346

Query: 727 CLCLK-NGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGN 784
            L ++ +    +    + ++D+  ++G L  A++ + R   + T + W  ++    IY N
Sbjct: 347 DLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRN 406



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 145/294 (49%), Gaps = 5/294 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HAQ+I++G    +D +  +++ + Y + G   SA K F     RS   W++ +  +    
Sbjct: 43  HAQIIRVG--LRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ-N 99

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+ ++ L ++ ++  +G       ++ ++  C      +   ++H   +K   D +V + 
Sbjct: 100 GDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVG 159

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KC  V+ AN +F E      D+ W+ ++   ++NE +E A+ LF   Q    
Sbjct: 160 TALLDVYAKCGLVKDANLVF-ECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +    TI   L ACA   A  EGKQ+     K+ + SN+ V + LI MY++   +E A  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           VF S+++ N+  WN+++S ++       A   F KM    I P+ IT+  +LS 
Sbjct: 279 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSA 332



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 6/174 (3%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G +V A   K G   ++ +  +L++ Y KC  +E A  +FS V + ++ +LWN I+    
Sbjct: 241 GKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEE-KNVVLWNAILSGFS 299

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNL 431
           R+ +   A+  F +MQ         T + +L AC+ +G   +G++    +++   +  N+
Sbjct: 300 RHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNV 359

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS---YTGLGYVDVA 481
              +C++ +  R   L  A    D M  D   S W S+++S   Y  L   +VA
Sbjct: 360 LHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVA 413


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 211/586 (36%), Positives = 322/586 (54%), Gaps = 40/586 (6%)

Query: 526  LGFRPNG-SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
            +G R    S +  +LQ+    R    G   H  I+R GL  D      LM+MY K   ++
Sbjct: 40   VGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVE 99

Query: 585  NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE----------------- 627
            +A+++FD M  R++V+WN+++  +   G    A  +  QM++E                 
Sbjct: 100  SARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACA 159

Query: 628  ------------------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVV 669
                               +  ++    +L+  Y+  G  K+A ++   M       + V
Sbjct: 160  AKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPER----SDV 215

Query: 670  TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            TW+S+++G +QNE Y E+L  F + Q   ++ N  T+SS L  C     L  GK++  + 
Sbjct: 216  TWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVS 275

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
             K G   + +V + LIDMY+K G ++ A  VF     K +  WN ++ GF+ +    EA+
Sbjct: 276  CKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAM 335

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
            + F ++ + G  P+ IT+ ++L+AC + GLVE+G KYFD M   +N+ P + HYSCMVD+
Sbjct: 336  IYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDI 395

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            LG+AG L EA DFI  MPF   A++WG+LL SCRI+ +LE AE+A++ LF++EP N+ N+
Sbjct: 396  LGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNH 455

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N+ A ++RWE+V R R+ + E   K     SWI+I   VH F      HP   EIY
Sbjct: 456  VLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIY 515

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
             +L  LV EMKK+GY   T     D++E  K ++L  H+EKLA+ +G+M     APIR++
Sbjct: 516  LKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIM 575

Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            KN R+C DCH+  K  S +  REI +RD  RFHHF+ G CSC + W
Sbjct: 576  KNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 175/364 (48%), Gaps = 37/364 (10%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G+  HA +I+ G   D      LMN Y KC  VESA KLF E+  +   + WN ++    
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP-VRSLVSWNTMVGSHT 124

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +N   E A+ LF +MQ         T+  ++ ACA      E KQ+HG+ LK+AL+SN+ 
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 184

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V   L+ +Y++   ++ A  VF+ M + +  +W+SM++ Y                    
Sbjct: 185 VGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGY-------------------- 224

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           +Q ++               Y+  L L    Q++G   N  ++S  L A      L  G+
Sbjct: 225 VQNEL---------------YEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 269

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           +      + G+  +++V +SL+DMY K   ++ A  VF +++ +N+V WN+++SG+    
Sbjct: 270 QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHV 329

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
             + A     +M++  I P+ +++ S++S  S  G  ++       M +   + PNV+ +
Sbjct: 330 RSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHY 389

Query: 672 TSLI 675
           + ++
Sbjct: 390 SCMV 393



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 188/420 (44%), Gaps = 76/420 (18%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ+ A+  A  EG   H  +++  L ++    N L++MYS+   +E A ++FD M   +
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           L SWN+M+ S+T                                    +G  +  L L  
Sbjct: 113 LVSWNTMVGSHT-----------------------------------QNGDCEKALVLFM 137

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            MQ  G   +  +VS V+ A      +   ++ HG+ L+  LD +++VGT+L+D+Y K  
Sbjct: 138 QMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCG 197

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME---------------- 625
            +++A  VF+ M  R+ V W+S+++GY    L+  A  + ++ +                
Sbjct: 198 LVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALS 257

Query: 626 -------------------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
                              +  I  ++   +SL+  Y+  G  +EA  +   ++      
Sbjct: 258 ACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEE----K 313

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           NVV W +++SG  ++    E++ +F +MQQ  I PN  T  S+L  C  LGL++ G++  
Sbjct: 314 NVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYF 373

Query: 727 CLCLK-NGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGN 784
            L ++ +    +    + ++D+  ++G L  A++ + R   + T + W  ++    IY N
Sbjct: 374 DLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRN 433



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 145/294 (49%), Gaps = 5/294 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HAQ+I++G    +D +  +++ + Y + G   SA K F     RS   W++ +  +    
Sbjct: 70  HAQIIRVG--LRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ-N 126

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+ ++ L ++ ++  +G       ++ ++  C      +   ++H   +K   D +V + 
Sbjct: 127 GDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVG 186

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL++ Y KC  V+ AN +F E      D+ W+ ++   ++NE +E A+ LF   Q    
Sbjct: 187 TALLDVYAKCGLVKDANLVF-ECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +    TI   L ACA   A  EGKQ+     K+ + SN+ V + LI MY++   +E A  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           VF S+++ N+  WN+++S ++       A   F KM    I P+ IT+  +LS 
Sbjct: 306 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSA 359



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 6/174 (3%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G +V A   K G   ++ +  +L++ Y KC  +E A  +FS V + ++ +LWN I+    
Sbjct: 268 GKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEE-KNVVLWNAILSGFS 326

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK-SALESNL 431
           R+ +   A+  F +MQ         T + +L AC+ +G   +G++    +++   +  N+
Sbjct: 327 RHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNV 386

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISS---YTGLGYVDVA 481
              +C++ +  R   L  A    D M  D   S W S+++S   Y  L   +VA
Sbjct: 387 LHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVA 440


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 235/722 (32%), Positives = 367/722 (50%), Gaps = 75/722 (10%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           ++K C  L    L + VH +    GF  D+ +  AL+  Y     +  A ++F E+    
Sbjct: 151 VIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQ-R 209

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           D +LWN ++   +++  + NA+  F  M+ S +   S T   +L  CA  G F  G Q+H
Sbjct: 210 DTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVH 269

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G V+ S  E +  V N L++MYS+   L      FD+ K                     
Sbjct: 270 GLVIGSGFEFDPQVANTLVAMYSKCGNL------FDARK--------------------- 302

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
               LFN M     Q D +TWN L++G+  +G       L   M S G +P+  + +  L
Sbjct: 303 ----LFNTMP----QTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFL 354

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
            ++ E   L++ +E H YI+R+ + +D+Y+ ++L+D+Y K   ++ A+++F      ++ 
Sbjct: 355 PSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVA 414

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS--------------------- 638
              ++ISGY   GL ++A      + +E + P+ ++  S                     
Sbjct: 415 VCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDI 474

Query: 639 --------------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
                         +   Y+  G+   A      M  +    + + W S+IS   QN   
Sbjct: 475 LKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSET----DSICWNSMISSFSQNGKP 530

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             ++  F QM     K +S ++SS L +   L  L  GKE+H   ++N F  D +VA+ L
Sbjct: 531 EMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASAL 590

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           IDMYSK G L  AR VF   A K   SWN +I  +  +G  +E + LFHE+L  G  PD 
Sbjct: 591 IDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDH 650

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
           +TF  +++AC ++GLV EG  YF  M+ +Y I   +EHY+CMVDL G+AG L EA+D I+
Sbjct: 651 VTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIK 710

Query: 865 TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
           +MPF PDA +WG LLG+CR+HG++E A++ASR L +L+P NS  Y L+ N+ A +  W  
Sbjct: 711 SMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGS 770

Query: 925 VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
           V ++R  M E GV+ +  +SWI ++   H+FSA    HP + EIY  L  L+ E++K GY
Sbjct: 771 VLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQGY 830

Query: 985 VP 986
           VP
Sbjct: 831 VP 832



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/603 (23%), Positives = 241/603 (39%), Gaps = 78/603 (12%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +LI  Y + G    A + F     R    W+  L  Y    G+    +  +  +     +
Sbjct: 185 ALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVK-SGDFNNAMGTFCGMRTSYSM 243

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             S   T IL +C     F LG +VH  +I  GF+FD  +   L+  Y KC ++  A KL
Sbjct: 244 VNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKL 303

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F+ +    D + WN +I   ++N   + A  LF  M  +  K  S T    L +  + G+
Sbjct: 304 FNTMPQ-TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGS 362

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               K++H Y+++  +  ++ + + LI +Y +   +E+A ++F           N+++  
Sbjct: 363 LRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQ---------NTLV-- 411

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                                   D+     ++SG+  HG   + +   R +   G  PN
Sbjct: 412 ------------------------DVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPN 447

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
             +++ VL A   L  LK G+E H  IL+  L+  + VG+++ DMY K   L  A E F 
Sbjct: 448 SLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFR 507

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK--------------------- 630
            M   + + WNS+IS +   G    A  +  QM     K                     
Sbjct: 508 RMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYY 567

Query: 631 --------------PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                          D    ++L+  YS  G+   A  + + M       N V+W S+I+
Sbjct: 568 GKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGK----NEVSWNSIIA 623

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFI 735
               +   RE L  F +M +  + P+  T   ++  CG  GL+  G    HC+  + G  
Sbjct: 624 AYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIG 683

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHE 794
                   ++D+Y ++G L  A +  +       A  W  ++    ++GN + A L    
Sbjct: 684 ARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRH 743

Query: 795 LLE 797
           LLE
Sbjct: 744 LLE 746



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/535 (22%), Positives = 226/535 (42%), Gaps = 82/535 (15%)

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
           ++  +  + +AC+      + +Q+H  ++   +    ++ + ++ +Y    ++     +F
Sbjct: 43  LTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLF 102

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
             ++  N   WN MI     LG+ D A   + KM  S +                     
Sbjct: 103 FGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVS-------------------- 142

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                          P+  +   V++A   L  +      H      G   DL+VG++L+
Sbjct: 143 ---------------PDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALI 187

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------- 627
            +Y  N  + +A+ VFD +  R+ + WN ++ GY   G F NA      M          
Sbjct: 188 KLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSV 247

Query: 628 ------------------------------EIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
                                         E  P +   N+LV+ YS  G   +A  + +
Sbjct: 248 TYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVA--NTLVAMYSKCGNLFDARKLFN 305

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            M  +    + VTW  LI+G +QN    E+   F  M    +KP+S T +S L +    G
Sbjct: 306 TMPQT----DTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESG 361

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
            L++ KE+H   +++    D Y+ + LID+Y K G+++ AR++F+++    +A    MI 
Sbjct: 362 SLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMIS 421

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNI 836
           G+ ++G   +AI  F  L++ G  P+++T  ++L AC     ++ G + + D +      
Sbjct: 422 GYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLEN 481

Query: 837 IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
           I  +   S + D+  K G LD A++F R M  + D+  W +++ S   +G  E A
Sbjct: 482 IVNVG--SAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNSMISSFSQNGKPEMA 533



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 218/538 (40%), Gaps = 67/538 (12%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  + + C+         +VH  +I  G      L   ++  Y  C  +     LF  + 
Sbjct: 47  LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGL- 105

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
           +L + L WN +I        ++ A+  + +M  S+      T   +++AC  +       
Sbjct: 106 ELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM 165

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            +H          +L V + LI +Y+ N  +  A RVFD +                   
Sbjct: 166 VVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP------------------ 207

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
                            Q D I WN +L G+   G + N +    GM++     N  + +
Sbjct: 208 -----------------QRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYT 250

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            +L           G + HG ++ +G ++D  V  +L+ MY K   L +A+++F+ M   
Sbjct: 251 CILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQT 310

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL---------------VS 641
           + V WN LI+GY   G    A  + N M    +KPD V++ S                V 
Sbjct: 311 DTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVH 370

Query: 642 GYSIWGQS------KEALVIIH----------HMKNSGIYPNVVTWTSLISGSLQNENYR 685
            Y +  +       K AL+ I+           +       +V   T++ISG + +    
Sbjct: 371 SYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNI 430

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           +++  F  + QE + PNS TM+S+L  C  L  L+ GKE+HC  LK        V + + 
Sbjct: 431 DAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAIT 490

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           DMY+K G L  A E FR+ +      WN MI  F+  G  + A+ LF ++  +G + D
Sbjct: 491 DMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFD 548


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/676 (32%), Positives = 354/676 (52%), Gaps = 78/676 (11%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            L+ C K  A    K+IH  ++KS L     + N L+  Y + N L+ A  +FD M   + 
Sbjct: 9    LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
             SW S++++Y      +   S+F+ M  + R+QPD          HF + +         
Sbjct: 69   VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPD----------HFVYAT--------- 109

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG-YILRNGLDYDLYVGTSLMDMYVKN 580
                            +L+A   L  L+ G++ H  ++L   +D D+ V +SL+DMY K 
Sbjct: 110  ----------------LLKACASLCSLRLGKQVHARFVLSPFVDDDV-VKSSLVDMYAKC 152

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
                 A+ VFD++  +  V                                   SW +++
Sbjct: 153  GLPSIARSVFDSILVKTSV-----------------------------------SWTAML 177

Query: 641  SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
            SGY+  G   EA+ +        +Y    +WT+LISG +Q+    +    FI+M++E + 
Sbjct: 178  SGYARSGLKDEAMELFLRTPVRNLY----SWTALISGLVQSGYCIDGCYMFIEMRREGVD 233

Query: 701  -PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
              +   +SS++  C  L +L  GK+IH L + +G+    +++  L+DMY+K  ++ +AR 
Sbjct: 234  IVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARN 293

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF +  ++ + SW  +I+G A +G  KEA+ L+ +++    +P+ +TF  L+ AC ++GL
Sbjct: 294  VFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGL 353

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            V +G K F +M  DY I P+++ ++C +DLL ++G+L+EA D I+TMP KPD   W ALL
Sbjct: 354  VSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALL 413

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             +C+ HG+ E     + RL  L     + Y L+ N+ A + +WE + R+R  M ++ VK 
Sbjct: 414  SACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKR 473

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
               +S I + +   VF A    HP   EI+  L  L +EM+K GY+PDT  V  D++E+E
Sbjct: 474  KPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQE 533

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K + L  H+E+ A+ YGL+K      IR++KN R+C DCHT  K  S +  +EI +RD  
Sbjct: 534  KERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDAT 593

Query: 1060 RFHHFREGECSCNDCW 1075
            R+HHF++G CSCND W
Sbjct: 594  RYHHFKDGRCSCNDFW 609



 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 233/525 (44%), Gaps = 34/525 (6%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           LKLCTK  A     ++HA ++K G +    L   L++ YGKC  ++ A+ LF E+    D
Sbjct: 9   LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQ-RD 67

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV--KMLQACAKVGAFHEGKQI 418
            + W  I+    + +     + +F  M F++ +      V   +L+ACA + +   GKQ+
Sbjct: 68  HVSWASILTAYNQAKLPNKTLSIFHYM-FTTDRLQPDHFVYATLLKACASLCSLRLGKQV 126

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H   + S    +  V + L+ MY++     +A  VFDS+      SW +M+S Y   G  
Sbjct: 127 HARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLK 186

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV-SV 537
           D A  LF +        ++ +W  L+SG    G   +   +   M+  G       V S 
Sbjct: 187 DEAMELFLRTPVR----NLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSS 242

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           V+ A   L +L  G++ HG ++ +G +  L++  +L+DMY K   +  A+ VF+ M +R+
Sbjct: 243 VVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRD 302

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           +V+W S+I G    G    A  + +QM   EIKP+ V++  L+   S  G   +   +  
Sbjct: 303 VVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFK 362

Query: 658 HM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            M ++  I P++  +T  +    ++ +  E+      M     KP+  T ++LL  C   
Sbjct: 363 AMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPH---KPDEPTWAALLSACKHH 419

Query: 717 GLLQNGKEIHCLCLKNG--------FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
           G  + G  I    L            + + Y   G  +  S+   L +  EV RK    +
Sbjct: 420 GNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSS 479

Query: 769 L----------ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
           +          A   C  M   I+G  KE   L  E+ + G+ PD
Sbjct: 480 IDLGKESQVFHAGETCHPMKDEIFGLLKE---LDAEMRKRGYIPD 521



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 34/328 (10%)

Query: 209 SVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
           + K  HAQ++K G +     +  +L+  Y +      A   F     R +  W+S L  Y
Sbjct: 20  NAKKIHAQIVKSG-LNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAY 78

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSR-ILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
                   + L ++  +     +     +   +LK C  L +  LG +VHA  +   F  
Sbjct: 79  NQ-AKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVD 137

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEV-----------------SDLEDDLL------- 363
           D  +K +L++ Y KC     A  +F  +                 S L+D+ +       
Sbjct: 138 DDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTP 197

Query: 364 ------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV-KMLQACAKVGAFHEGK 416
                 W  +I   +++    +   +F EM+      +   ++  ++ ACA +     GK
Sbjct: 198 VRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGK 257

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           QIHG V+ S  ES L + N L+ MY++ + +  A  VF+ M   ++ SW S+I      G
Sbjct: 258 QIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHG 317

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLL 504
               A  L+++M  + I+P+ +T+  L+
Sbjct: 318 RAKEALDLYDQMVLAEIKPNEVTFVGLI 345



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 134/299 (44%), Gaps = 37/299 (12%)

Query: 227 DDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG--GEVQEL----- 278
           DD+VKS L+  Y + G  + A   F     ++   W++ L  Y   G   E  EL     
Sbjct: 138 DDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTP 197

Query: 279 ---LEVWG--------------------ELHGKGV-IFRSRILTIILKLCTKLMAFWLGV 314
              L  W                     E+  +GV I    +L+ ++  C  L    LG 
Sbjct: 198 VRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGK 257

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLR 373
           ++H  +I  G++  + +  AL++ Y KC D+ +A  +F+ +  L  D++ W  II+   +
Sbjct: 258 QIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRM--LHRDVVSWTSIIVGAAQ 315

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLS 432
           + + + A+ L+ +M  +  K    T V ++ AC+  G   +G+++   +++   +  +L 
Sbjct: 316 HGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQ 375

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDH-NLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
           +  C + + SR+  L  A  +  +M    +  +W +++S+    G  ++   + +++ S
Sbjct: 376 LFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLS 434


>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Glycine max]
          Length = 696

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 215/671 (32%), Positives = 352/671 (52%), Gaps = 51/671 (7%)

Query: 331 LKCALMNFYGKCRDVESANKLFSEV--SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           L   L+  Y +   +  A K+F  +    L   LLWN II   + +   ++A++L+ EM+
Sbjct: 65  LAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMR 124

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
                    T+  +++AC+ +G+ +  + +H + L+    ++L V N L+ MY +  ++E
Sbjct: 125 KLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRME 184

Query: 449 LATRVFDSMKDHNLSSWNSMISSYT----GLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            A ++FD M   ++ SWN+M+S Y      LG    A  +F +M    +QP+ +TW  LL
Sbjct: 185 DARQLFDGMFVRSIVSWNTMVSGYALNRDSLG----ASRVFKRMELEGLQPNSVTWTSLL 240

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           S H   G Y   L L + M++ G      +++VVL    ++  + +G+E HGY+++ G +
Sbjct: 241 SSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYE 300

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
             L+V  +L+  Y K+  + +A +VF  +KN+N                           
Sbjct: 301 DYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKN--------------------------- 333

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG------IYPNVVTWTSLISGS 678
                   LVSWN+L+S Y+  G   EA     HM+ S       + PNV++W+++ISG 
Sbjct: 334 --------LVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGF 385

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
                  +SL+ F QMQ   +  N  T+SS+L  C  L  L  G+E+H   ++N    + 
Sbjct: 386 AYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNI 445

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            V  GLI+MY K G+ K    VF     + L SWN +I G+ ++G G+ A+  F+E++  
Sbjct: 446 LVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRA 505

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
             +PD ITF A+L+AC ++GLV  G   FD M T++ I P +EHY+CMVDLLG+AG L E
Sbjct: 506 RMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKE 565

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
           A D +R MP +P+  +WGALL SCR++  ++  E  + ++  L+   + ++ L+ N+ A 
Sbjct: 566 ATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAA 625

Query: 919 SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
           + RW+D  R+R S    G+K +   SWI++ + V+ FSA    H    +IY  L  L   
Sbjct: 626 NGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILEELNLH 685

Query: 979 MKKLGYVPDTR 989
           M    Y  D++
Sbjct: 686 MASENYKLDSQ 696



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 233/494 (47%), Gaps = 45/494 (9%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +    S G   Q  LE++ E+   G +     L ++++ C+ L + +L   VH   
Sbjct: 100 WNSIIRANVSHGYH-QHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHA 158

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFS--------------------------- 353
           ++ GF   +H+   L+  YGK   +E A +LF                            
Sbjct: 159 LQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGAS 218

Query: 354 ------EVSDLE-DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
                 E+  L+ + + W  ++    R   ++  ++LF+ M+    +  +  +  +L  C
Sbjct: 219 RVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVC 278

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           A +     GK+IHGYV+K   E  L V N LI  Y ++  +  A +VF  +K+ NL SWN
Sbjct: 279 ADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWN 338

Query: 467 SMISSYTGLGYVDVAWSLFNKM------NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           ++ISSY   G  D A++ F  M      + S ++P++I+W+ ++SG    G  +  L L 
Sbjct: 339 ALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELF 398

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
           R MQ      N  ++S VL    EL  L  GRE HGY +RN +  ++ VG  L++MY+K 
Sbjct: 399 RQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKC 458

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
              +    VFDN++ R++++WNSLI GY   GL  NA +  N+M    +KPD +++ +++
Sbjct: 459 GDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAIL 518

Query: 641 SGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           S  S  G       +   M     I PNV  +  ++    +    +E+      M    I
Sbjct: 519 SACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMP---I 575

Query: 700 KPNSTTMSSLLQTC 713
           +PN     +LL +C
Sbjct: 576 EPNEYVWGALLNSC 589



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 161/367 (43%), Gaps = 75/367 (20%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY----E 269
           H   ++MG   N   +V  L+  Y + G    A + F   F RS   W++ +  Y    +
Sbjct: 155 HCHALQMG-FRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRD 213

Query: 270 SFG------------------------------GEVQELLEVWGELHGKGVIFRSRILTI 299
           S G                              G   E LE++  +  +G+   +  L +
Sbjct: 214 SLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAV 273

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV---- 355
           +L +C  +     G E+H  ++K G++  + +K AL+  YGK + +  A+K+F E+    
Sbjct: 274 VLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKN 333

Query: 356 -----------------------------SDLEDDLL-------WNEIIMVKLRNEKWEN 379
                                        SD +D  L       W+ +I       + E 
Sbjct: 334 LVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEK 393

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           +++LFR+MQ +   A   TI  +L  CA++ A + G+++HGY +++ +  N+ V N LI+
Sbjct: 394 SLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLIN 453

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MY +    +    VFD+++  +L SWNS+I  Y   G  + A   FN+M  +R++PD IT
Sbjct: 454 MYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNIT 513

Query: 500 WNCLLSG 506
           +  +LS 
Sbjct: 514 FVAILSA 520



 Score = 46.2 bits (108), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS---WNCM 775
           LQ  +++H   +     +  ++A  LI +Y++   L  AR+VF     ++L     WN +
Sbjct: 44  LQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSI 103

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
           I     +G  + A+ L+ E+ + GF PD  T   ++ AC + G
Sbjct: 104 IRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLG 146


>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 596

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 211/601 (35%), Positives = 321/601 (53%), Gaps = 45/601 (7%)

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH----GSYQNVLTLLRGMQSLGFRPNGSS 534
            D+ ++L   + +S   P +  +N  + G F+     GS  + + L   M  L   PN  +
Sbjct: 37   DIDYALLLLLRTS-TPPTVFLFNTTIRG-FSRARRPGSLLSSVLLFVRMGVLSLAPNNFT 94

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
             + + Q  +       GR+ HG +++N  + D++V  S++  Y     L +A+ VFD   
Sbjct: 95   FTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFD--- 151

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                                            E  + D+VSWNS++ G    G   EAL 
Sbjct: 152  --------------------------------ESSELDVVSWNSMIDGCIRNGNILEALS 179

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
            +   M       N ++W  +ISG  QN   +E+L  F +MQ  D +PNS  + S+L  C 
Sbjct: 180  LFSKMTER----NDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACS 235

Query: 715  GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
             LG L +G  +HC   K     D+ ++  LIDMY+K G++  A + F  S  + ++++  
Sbjct: 236  QLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTA 295

Query: 775  MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
             I G A+ G  +EA+ LF ++   G  PD +++ A+L AC ++G VE+G+ YF SMS  +
Sbjct: 296  AISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVH 355

Query: 835  NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
             I P ++HY+CMVDLLG+AG L+EA  F+ +MP KPD  IWGALLG+CR++G+ E  +  
Sbjct: 356  GIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRV 415

Query: 895  SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
               L + +  +   Y L+ N+ A S + ED E++R +M    V  V   S I++   VH 
Sbjct: 416  GSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHE 475

Query: 955  FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
            F +    H  T EIY     +V E+KK GY  +TR V  D++EEEK  V+  H+EKLA+ 
Sbjct: 476  FFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEEEEKEAVIGHHSEKLAVA 535

Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
            +G + TKS + +R++KN R+CSDCH A K +S V  R+I +RD   FHHF EG CSC D 
Sbjct: 536  FGFLYTKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGLCSCKDY 595

Query: 1075 W 1075
            W
Sbjct: 596  W 596



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 191/391 (48%), Gaps = 12/391 (3%)

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
           +++ LF  M   S    + T   + Q C+   AF  G+Q HG V+K++ E ++ V N +I
Sbjct: 75  SSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSII 134

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
             YS   +L  A  VFD   + ++ SWNSMI      G +  A SLF+KM     + + I
Sbjct: 135 RFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSLFSKMT----ERNDI 190

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
           +WN ++SG+  +G  +  L L R MQ L   PN + +  VL A ++L  L +G   H YI
Sbjct: 191 SWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYI 250

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
            +  +  D  +  +L+DMY K   +  A + F   + R++ A+ + ISG    G    A 
Sbjct: 251 GKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEAL 310

Query: 619 KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISG 677
           ++  QM+ E I PD VS+ +++   S  G  ++       M +  GI P +  +  ++  
Sbjct: 311 QLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDL 370

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             +     E+ KF   M    IKP++    +LL  C   G  + G+ +  L +++    D
Sbjct: 371 LGRAGLLEEAEKFVASMP---IKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHD 427

Query: 738 A-YVATGLIDMYSKSGNLKSAREVFRKSANK 767
             Y+   L ++Y++S   + A +V RK+  +
Sbjct: 428 GRYIL--LSNIYAESMKGEDAEQV-RKTMRR 455



 Score =  103 bits (258), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 31/265 (11%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            T + + C+  +AF LG + H  +IK  F+ DV ++ +++ FY  C  +  A  +F E S
Sbjct: 95  FTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESS 154

Query: 357 DLE------------------------------DDLLWNEIIMVKLRNEKWENAIKLFRE 386
           +L+                              +D+ WN +I    +N + + A+ LFRE
Sbjct: 155 ELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFRE 214

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           MQ    +  S  +V +L AC+++GA   G  +H Y+ K  +  +  +   LI MY++   
Sbjct: 215 MQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGS 274

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           ++LA + F + +  ++S++ + IS     G  + A  LF +M    I PD +++  +L  
Sbjct: 275 IDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCA 334

Query: 507 HFTHGSYQNVLTLLRGMQSL-GFRP 530
               G  +        M  + G RP
Sbjct: 335 CSHAGWVEKGFHYFASMSDVHGIRP 359



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 21/241 (8%)

Query: 224 WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
           WNS  M+   I +    G+   A   F     R+   W+  +  Y    G+ +E L ++ 
Sbjct: 161 WNS--MIDGCIRN----GNILEALSLFSKMTERNDISWNMMISGYAQ-NGQPKEALALFR 213

Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
           E+        S IL  +L  C++L A   G  VH  + K+    D  L  AL++ Y KC 
Sbjct: 214 EMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCG 273

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            ++ A + FS  S   D   +   I     N   E A++LF +M+         + + +L
Sbjct: 274 SIDLAMQAFS-TSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVL 332

Query: 404 QACAKVGAFHEG-------KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            AC+  G   +G         +HG      +   L    C++ +  R   LE A +   S
Sbjct: 333 CACSHAGWVEKGFHYFASMSDVHG------IRPELDHYACMVDLLGRAGLLEEAEKFVAS 386

Query: 457 M 457
           M
Sbjct: 387 M 387


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13880-like
            [Cucumis sativus]
          Length = 746

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/777 (30%), Positives = 389/777 (50%), Gaps = 85/777 (10%)

Query: 341  KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV 400
            KC D  SA+KLF ++S   + + +N +I   ++    +  + LF + +    K       
Sbjct: 13   KCGDTRSADKLFDKMSK-SNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71

Query: 401  KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
              L AC++ G    GK IHG +L   L S + + N LI MYS+                 
Sbjct: 72   GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSK----------------- 114

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
                           G VD A  LF+  +    + D ++WN L++G+  +G Y+ +LT+L
Sbjct: 115  --------------CGQVDYARILFDHSD----KLDGVSWNSLIAGYVQNGKYEELLTIL 156

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTE-LRLLK-YGRESHGYILRNGLDYDLYVGTSLMDMYV 578
            + M   G   N  ++   L+A +      K +G   H + ++ GL  D+ VGT+L+DMY 
Sbjct: 157  QKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYA 216

Query: 579  KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN--AKKMLN---QMEEEEIKPDL 633
            K   L +A ++FD M ++N+V +N++++G   +    +  A K LN   +M+   IKP +
Sbjct: 217  KTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSM 276

Query: 634  VSWNSLVSG-----------------------------------YSIWGQSKEALVIIHH 658
             +++SL+                                     YS+ G   +AL+  + 
Sbjct: 277  FTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNS 336

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
            + N  I P     T++I G LQN  +  +L  F ++   + KP+    S+++ +C  +G+
Sbjct: 337  IHNLTIVP----MTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGM 392

Query: 719  LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
            L++G++I     K G  +        I MY+KSG+L +A   F++  N  + SW+ MI  
Sbjct: 393  LRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICS 452

Query: 779  FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
             A +G+  EA+  F  +   G +P+   F  +L AC + GLVEEG +YFD+M  DY +  
Sbjct: 453  NAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKL 512

Query: 839  TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRL 898
             ++H  C+VDLLG+AG L +A   I  + F+ +  +W ALL +CRIH     A+  ++++
Sbjct: 513  HVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKV 572

Query: 899  FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAE 958
             +LEP  SA+Y L+ N+   +       ++R  M+E  +K     SWIQI   V+ F + 
Sbjct: 573  IELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSG 632

Query: 959  GAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM 1018
               H  +G+IY +L  +++  K+L    D   +   I+ E    V   H+EKLA+ +G++
Sbjct: 633  DRSHKNSGQIYAKLDEMLATTKRLDSAKDI--LGYKIEHEHLTNVNY-HSEKLAVAFGVL 689

Query: 1019 KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
                 AP+RV+KN R+C DCH   K  S+V  RE+ +RD  RFHHF++G CSC D W
Sbjct: 690  YLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 746



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 140/637 (21%), Positives = 260/637 (40%), Gaps = 135/637 (21%)

Query: 234 IFHYLEF-------GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELH 286
           +FH L F       GD  SA K F      +   ++S +  Y      + +++ ++ +  
Sbjct: 1   MFHMLPFSSRQCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMS-NLDKVMILFDKAR 59

Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
             G+          L  C++      G  +H  ++  G    V L  +L++ Y KC  V+
Sbjct: 60  RLGLKLDKYNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVD 119

Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
            A  LF   SD  D + WN +I   ++N K+E  + + ++M  +     + T+   L+AC
Sbjct: 120 YARILFDH-SDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKAC 178

Query: 407 AKV--GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           +    G    G  +H + +K  L  ++ V   L+ MY++   L+ A ++FD M D N+  
Sbjct: 179 SSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVM 238

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
           +N+M++   GL                 +Q + I   C         +Y+  L L   M+
Sbjct: 239 YNAMMA---GL-----------------LQQETIEDKC---------AYK-ALNLFFEMK 268

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
           S G +P+  + S +L+A   +   K+ ++ H  + +NGL  D Y+G+ L+D+Y     + 
Sbjct: 269 SCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMM 328

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
           +A   F+++ N  IV   ++I GY   G F +A  +  ++   E KPD   +++++S  +
Sbjct: 329 DALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCA 388

Query: 645 IWGQSKEALVIIHHMKNSGIY-------------------------------PNVVTWTS 673
             G  +    I  H    GI                                P++V+W++
Sbjct: 389 NMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWST 448

Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-------- 725
           +I  + Q+ +  E+L+FF  M+   I+PN      +L  C   GL++ G           
Sbjct: 449 MICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDY 508

Query: 726 -------HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
                  HC+C              ++D+  ++G L  A  +                  
Sbjct: 509 KMKLHVKHCVC--------------VVDLLGRAGRLADAESL------------------ 536

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
                           +L  GF+ + + + ALL+AC+
Sbjct: 537 ----------------ILRLGFEHEPVMWRALLSACR 557


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like
            [Vitis vinifera]
          Length = 741

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/738 (31%), Positives = 372/738 (50%), Gaps = 80/738 (10%)

Query: 378  ENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            + A+KLF  +        S  T   + QACA+  +  EG+ +H ++              
Sbjct: 44   QEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMF------------- 90

Query: 437  LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
               +++ N+             D NL   N +++ Y   G +D A  +F++M     + +
Sbjct: 91   ---LHNPNS-------------DFNLFLTNHVVNMYAKCGSLDYAHQMFDEMP----EKN 130

Query: 497  IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
            I++W  L+SG+  HG       + RGM  +  +P   + + V+ A         GR+ H 
Sbjct: 131  IVSWTALVSGYAQHGRSNECFRVFRGML-IWHQPTEFAFASVISACGGDD--NCGRQVHA 187

Query: 557  YILRNGLDYDLYVGTSLMDMYVKN-DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
              L+   D  +YVG +L+ MY K+      A  V++ M  RN+V+WNS+I+G+   G   
Sbjct: 188  LALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGN 247

Query: 616  NAKKMLNQMEEEEIKPDLVSWNSLVS----------------------GYSIWGQSKEAL 653
             A ++ +QM    I+ D  +  S+ S                      G+ +  +   AL
Sbjct: 248  RALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATAL 307

Query: 654  VIIHHMKNSGI------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            V  +      +              +VV+WT +I+ +    + +++L  F Q  +E + P
Sbjct: 308  VKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIA-AFAERDPKKALVIFRQFLRECLAP 366

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +    S +L+ C GL   ++   +    LK GF  D  +A  LI   ++ G++  +++VF
Sbjct: 367  DRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVF 426

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             K  ++   SWN M+  +A++G GKEA+LLF ++     QPD  TF ALL+AC ++G+ E
Sbjct: 427  DKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAE 483

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            EG K F++MS ++ I+P ++HY+CMVD+LG+AG + EA + I  MP +PD+ +W ALLGS
Sbjct: 484  EGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGS 543

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CR HG  + A++A+ +L +L+P NS  Y LM N+     R+ +   +R  M+   V+   
Sbjct: 544  CRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEP 603

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SWI++   VH F++ G  HP    I   L  LV  +K LGYVP       DI++E K 
Sbjct: 604  GLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKE 663

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRA----PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            + L  H+EKLA+ + LM   S       I+++KN R+C DCH   K  S +   EI +RD
Sbjct: 664  EQLYYHSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRD 723

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFHHF+   CSCND W
Sbjct: 724  SNRFHHFKAKVCSCNDYW 741



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 115/515 (22%), Positives = 220/515 (42%), Gaps = 85/515 (16%)

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
           DF++ L   ++N Y KC  ++ A+++F E+ + ++ + W  ++    ++ +     ++FR
Sbjct: 97  DFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPE-KNIVSWTALVSGYAQHGRSNECFRVFR 155

Query: 386 EM-------QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
            M       +F+ A  IS        AC   G  + G+Q+H   LK++ +S + V N LI
Sbjct: 156 GMLIWHQPTEFAFASVIS--------ACG--GDDNCGRQVHALALKTSFDSCVYVGNALI 205

Query: 439 SMYSRN-NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
            MY ++    + A  V+++M   NL SWNSMI+ +   G  + A  LF++M+   I+   
Sbjct: 206 MMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIR--- 262

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                     F   +  ++ + L GM       +G      LQ +T              
Sbjct: 263 ----------FDRATLVSIFSCLCGM------GDGLECCFQLQCLT-------------- 292

Query: 558 ILRNGLDYDLYVGTSLMDMYVK-----NDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFK 611
            ++ G    + V T+L+  Y       +DC +    +F  +  R ++V+W  +I+ +  +
Sbjct: 293 -IKTGFILKIEVATALVKAYSSLGGEVSDCYR----IFLELDGRQDVVSWTGIIAAFAER 347

Query: 612 GLFVNAKKML---NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
               + KK L    Q   E + PD   ++ ++   +     + AL +  H+   G   ++
Sbjct: 348 ----DPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDI 403

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           V   +LI    +  +   S + F +M   D    + + +S+L+     G    GKE   L
Sbjct: 404 VLANALIHACARCGSVALSKQVFDKMGSRD----TVSWNSMLKAYAMHG---QGKEALLL 456

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-----TLASWNCMIMGFAIYG 783
             +     D      L+   S +G  +   ++F   +N       L  + CM+      G
Sbjct: 457 FSQMDAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAG 516

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
              EA  L  ++     +PD++ ++ALL +C+  G
Sbjct: 517 QISEAKELIDKM---PMEPDSVVWSALLGSCRKHG 548



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 174/404 (43%), Gaps = 44/404 (10%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGK-CRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           G +VHA  +K  FD  V++  AL+  Y K C   + A  ++ E     + + WN +I   
Sbjct: 182 GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVY-EAMGFRNLVSWNSMIAGF 240

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
                   A++LF +M     +    T+V +      +G                LE   
Sbjct: 241 QVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMG--------------DGLECCF 286

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL-GYVDVAWSLFNKMNS 490
            +  CL        K+E+AT               +++ +Y+ L G V   + +F +++ 
Sbjct: 287 QL-QCLTIKTGFILKIEVAT---------------ALVKAYSSLGGEVSDCYRIFLELDG 330

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
            +   D+++W  +++  F     +  L + R        P+    S+VL+A   L   ++
Sbjct: 331 RQ---DVVSWTGIIAA-FAERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERH 386

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
                 ++L+ G + D+ +  +L+    +   +  +++VFD M +R+ V+WNS++  Y  
Sbjct: 387 ALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAM 446

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVV 669
            G    A  + +QM+ +   PD  ++ +L+S  S  G ++E   I   M N+ GI P + 
Sbjct: 447 HGQGKEALLLFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLD 503

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +  ++    +     E+ +   +M  E   P+S   S+LL +C
Sbjct: 504 HYACMVDILGRAGQISEAKELIDKMPME---PDSVVWSALLGSC 544



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 100/453 (22%), Positives = 196/453 (43%), Gaps = 30/453 (6%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF-RSRILTIILKLCTKLMAFWLGV 314
           R+   W+S +  ++  G      LE++ ++H  G+ F R+ +++I   LC          
Sbjct: 228 RNLVSWNSMIAGFQVCGCG-NRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCF 286

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCR-DVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           ++    IK GF   + +  AL+  Y     +V    ++F E+   +D + W  II     
Sbjct: 287 QLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAE 346

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
            +  + A+ +FR+               +L+ACA +        +  +VLK   E ++ +
Sbjct: 347 RDP-KKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVL 405

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N LI   +R   + L+ +VFD M   +  SWNSM+ +Y   G    A  LF++M++   
Sbjct: 406 ANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDA--- 462

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           QPD  T+  LLS     G  +    +   M  + G  P     + ++  +     +   +
Sbjct: 463 QPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAK 522

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN---RNIVAWNSLISGYC 609
           E    I +  ++ D  V ++L+    K+   + A+     +K     N + +  + + +C
Sbjct: 523 E---LIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFC 579

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDL-VSW---NSLVSGYSIWGQS---KEALV-----IIH 657
             G F  A+ +  +ME + ++ +  +SW    + V  ++  GQ    KEA+      ++ 
Sbjct: 580 TDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVR 639

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
            +K+ G  P +    SL    +++E+  E L +
Sbjct: 640 RLKDLGYVPQI----SLALHDIEDEHKEEQLYY 668



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 45/266 (16%)

Query: 636 WNSLVSGYSIWGQS--KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           ++    G+S  G S   EA+ ++HH++                G LQ     E+LK F  
Sbjct: 9   FSGFFRGFSTTGVSLNSEAINLLHHIR-----------LLCSRGHLQ-----EALKLFYS 52

Query: 694 MQQEDIKPNST-TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA------YVATGLID 746
           +       +S  T ++L Q C     L  G+ +H    ++ F+ +       ++   +++
Sbjct: 53  ITPPPPLVHSHHTYAALFQACARRSSLPEGQALH----RHMFLHNPNSDFNLFLTNHVVN 108

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
           MY+K G+L  A ++F +   K + SW  ++ G+A +G   E   +F  +L    QP    
Sbjct: 109 MYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGML-IWHQPTEFA 167

Query: 807 FTALLAAC---KNSGLVEEGWKY---FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
           F ++++AC    N G           FDS     N +  +   SC        G  DEAW
Sbjct: 168 FASVISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSC--------GGADEAW 219

Query: 861 DFIRTMPFKPDATIWGALLGSCRIHG 886
           +    M F+ +   W +++   ++ G
Sbjct: 220 NVYEAMGFR-NLVSWNSMIAGFQVCG 244


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/784 (29%), Positives = 387/784 (49%), Gaps = 75/784 (9%)

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
            D  L   ++  YGKC+  E A ++F  +    +   W+ ++   ++N  ++ A+++++EM
Sbjct: 1    DTFLANMIIQMYGKCKSPEDARQVFDRIKQ-RNAFSWSILVECYVQNAMYQEALEVYKEM 59

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
                    + T+  +L AC K+    EG+ +     +   E ++ V   LI ++++   L
Sbjct: 60   VRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            E A  VF S                               M + R   DII+   ++  +
Sbjct: 120  EEAESVFRS-------------------------------MGAMR---DIISVTAMIGAY 145

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              HG     L     M+S G  P+  + + +L A +    L  G+  H +IL +    ++
Sbjct: 146  VRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNI 205

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
             V  +L+ MY K   L++++ +F  M  +++V+WN++I+ Y   G   +A  + ++M   
Sbjct: 206  SVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTL 265

Query: 628  EIKPDLVSW-----------------------------------NSLVSGYSIWGQSKEA 652
               PD+ ++                                   N+L+S ++  G  + A
Sbjct: 266  GHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESA 325

Query: 653  LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                + ++       +  W ++++   Q +  +++L  +  M  E   P+  T SS++ +
Sbjct: 326  RRYFYSIEK----KELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDS 381

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
            C  LG L+ GK IH      GF KD  + T L++MY+K G+L  A++ F   +NK + SW
Sbjct: 382  CASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSW 441

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            + MI   A +G+ +EA+ L H +   G   + +T +++L AC + G + EG  YF  +S 
Sbjct: 442  SAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQ 501

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
            D+ I    E+    +DLLG+AG+L EA   + TMPFK        LLG C++HG +   +
Sbjct: 502  DFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGK 561

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
              ++R+  LEP N  +Y L+ N+ A + RW+DV +LR  M + GVK     S I+    +
Sbjct: 562  ALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKI 621

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKL 1011
            + FS     +P   EI  EL  L S MK + GYVPDTR V+ D+ +++K ++L  H+EK+
Sbjct: 622  YEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKM 681

Query: 1012 AIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            A+ +GL+ +   + +R+IKN RVCSDCHT  K  S + GR I +RDG RFHHF  G CSC
Sbjct: 682  AMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSC 741

Query: 1072 NDCW 1075
             D W
Sbjct: 742  GDYW 745



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 242/549 (44%), Gaps = 70/549 (12%)

Query: 246 AAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCT 305
           A + F     R+   WS  +E Y       QE LEV+ E+  K +   +  L+ +L  CT
Sbjct: 21  ARQVFDRIKQRNAFSWSILVECYVQ-NAMYQEALEVYKEMVRKEISIDAYTLSSVLAACT 79

Query: 306 KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWN 365
           KL+    G  V     + GF+ DV +  +L++ + KC  +E A  +F  +  + D +   
Sbjct: 80  KLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVT 139

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
            +I   +R+ K + A+  + +M+    +  + T   +L AC+      +GK IH ++L+S
Sbjct: 140 AMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILES 199

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
               N+SV N LI+MY++   L+ +  +F +M   ++ SWN+MI++YT  G+   A+SLF
Sbjct: 200 KHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLF 259

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
           ++M +    PDI T+                                   S +L A    
Sbjct: 260 HRMCTLGHTPDIYTF-----------------------------------SSILGACASP 284

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
           + L+ GR  H  I   G D D  +  +L+ M+ +   L++A+  F +++ + + AWN+++
Sbjct: 285 KRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTML 344

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS--- 662
           + Y       +A  +   M  E   PD  +++S+V   +  G  +E    IH    S   
Sbjct: 345 AAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG-KFIHECSTSCGF 403

Query: 663 ----------------------------GIY-PNVVTWTSLISGSLQNENYRESLKFFIQ 693
                                       GI   +VV+W+++I+ S Q+ +  E+L+    
Sbjct: 404 EKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHL 463

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           M  + I  N  T SS+L  C   G L  G +    L    G  +D     G ID+  ++G
Sbjct: 464 MNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAG 523

Query: 753 NLKSAREVF 761
            LK A  V 
Sbjct: 524 WLKEAEHVL 532


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Vitis vinifera]
          Length = 729

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 236/731 (32%), Positives = 378/731 (51%), Gaps = 72/731 (9%)

Query: 407  AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV-FDSMKDHNLSSW 465
            ++VG F+  +Q+H  ++ ++L  +      LI+  +R       T + F+S  + N+  +
Sbjct: 9    SRVGNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVF 68

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
             SM+  Y+ L        ++ +M    ++PD   +  L+    T G   +   L  G  S
Sbjct: 69   TSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLKLGHGS 128

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL---RNGLDYDLYVG------------ 570
              F  N      V+     L  + + R+    I    R   D++  V             
Sbjct: 129  DAFVRNA-----VIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQ 183

Query: 571  --------------TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
                          T+++  Y K   L+ A+  FD M  R++V+WN+++SGY   GL   
Sbjct: 184  WLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEE 243

Query: 617  AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS--KEALVIIHHMK-------------- 660
            A ++ ++M    I+PD  +W +++S  S  G      +LV   H K              
Sbjct: 244  ALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLD 303

Query: 661  ---------------NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM-QQEDIKPNST 704
                           N+    NVVTW S+I+G  QN     +++ F +M   + + P+  
Sbjct: 304  MYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEV 363

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            TM S++  CG LG L+ G  +     +N           +I MYS+ G+++ A+ VF++ 
Sbjct: 364  TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 423

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
            A + + S+N +I GFA +G+G EAI L   + E G +PD +TF  +L AC ++GL+EEG 
Sbjct: 424  ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGR 483

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            K F+S+       P I+HY+CMVDLLG+ G L++A   +  MP +P A ++G+LL + RI
Sbjct: 484  KVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRI 538

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            H  +E  E+A+ +LF+LEP NS N+ L+ N+ A + RW+DVER+R +M + GVK    WS
Sbjct: 539  HKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWS 598

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            W++    +H F      H  + +IY  L  L  +M++ GY+ D  CV +D++EEEK +++
Sbjct: 599  WVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIV 658

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
             +H+EKLAI Y L+ +++ A IRV+KN RVC DCHTA K +S + GR I +RD  RFH F
Sbjct: 659  GTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCF 718

Query: 1065 REGECSCNDCW 1075
             +G CSC D W
Sbjct: 719  NDGLCSCKDYW 729



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/488 (23%), Positives = 203/488 (41%), Gaps = 119/488 (24%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVK 371
           G+  HA ++K G   D  ++ A+++ Y +   +  A K+F E+ D E  +  WN ++   
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            + E    A  LF  M                                        E N+
Sbjct: 174 WKWESEGQAQWLFDVMP---------------------------------------ERNV 194

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
                +++ Y++   LE A R FD M + ++ SWN+M+S Y   G  + A  LF++M ++
Sbjct: 195 ITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNA 254

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
            I+PD  TW  ++S   + G      +L+R +                            
Sbjct: 255 GIEPDETTWVTVISACSSRGDPCLAASLVRTLH--------------------------- 287

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
                   +  +  + +V T+L+DMY K   L +A+++F+ M  RN+V WNS+I+GY   
Sbjct: 288 --------QKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQN 339

Query: 612 G-------LF---VNAKKM----------------LNQME----------EEEIKPDLVS 635
           G       LF   + AKK+                L  +E          E +IK  +  
Sbjct: 340 GQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISG 399

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            N+++  YS  G  ++A  +   M       +VV++ +LISG   + +  E++     M+
Sbjct: 400 HNAMIFMYSRCGSMEDAKRVFQEMATR----DVVSYNTLISGFAAHGHGVEAINLMSTMK 455

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           +  I+P+  T   +L  C   GLL+ G+++    +K+  I D Y    ++D+  + G L+
Sbjct: 456 EGGIEPDRVTFIGVLTACSHAGLLEEGRKVF-ESIKDPAI-DHYAC--MVDLLGRVGELE 511

Query: 756 SAREVFRK 763
            A+    +
Sbjct: 512 DAKRTMER 519



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 140/278 (50%), Gaps = 7/278 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           +++  Y +  D  +A + F     RS   W++ L  Y    G  +E L ++ E+   G+ 
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQ-NGLAEEALRLFDEMVNAGIE 257

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   ++  C+      L   +  +L ++    +  ++ AL++ Y K  D++SA KL
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKL 317

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR---TIVKMLQACAK 408
           F+ +    + + WN +I    +N +   AI+LF+EM   +AK ++    T+V ++ AC  
Sbjct: 318 FNTMPG-RNVVTWNSMIAGYAQNGQSAMAIELFKEM--ITAKKLTPDEVTMVSVISACGH 374

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           +GA   G  +  ++ ++ ++ ++S  N +I MYSR   +E A RVF  M   ++ S+N++
Sbjct: 375 LGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTL 434

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           IS +   G+   A +L + M    I+PD +T+  +L+ 
Sbjct: 435 ISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTA 472



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 14/255 (5%)

Query: 206 CLSS--VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           CL++  V++ H + I++     +     +L+  Y +FGD  SA K F     R+   W+S
Sbjct: 277 CLAASLVRTLHQKRIQLNCFVRT-----ALLDMYAKFGDLDSARKLFNTMPGRNVVTWNS 331

Query: 264 FLEDYESFGGEVQELLEVWGEL-HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIK 322
            +  Y    G+    +E++ E+   K +      +  ++  C  L A  LG  V   L +
Sbjct: 332 MIAGYAQ-NGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE 390

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
                 +    A++  Y +C  +E A ++F E++   D + +N +I     +     AI 
Sbjct: 391 NQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMAT-RDVVSYNTLISGFAAHGHGVEAIN 449

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           L   M+    +    T + +L AC+  G   EG++    V +S  +  +    C++ +  
Sbjct: 450 LMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK----VFESIKDPAIDHYACMVDLLG 505

Query: 443 RNNKLELATRVFDSM 457
           R  +LE A R  + M
Sbjct: 506 RVGELEDAKRTMERM 520


>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
 gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
          Length = 638

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/598 (33%), Positives = 316/598 (52%), Gaps = 43/598 (7%)

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSV 537
            D A S++N ++   +        C + G     S    ++L   M +S    PN  +++ 
Sbjct: 83   DYALSIYNSISHPTVFATNNMIRCFVKGDLPRHS----ISLYSHMCRSFVAAPNKHTLTF 138

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            VLQA +    ++ G +   ++++ G   D++V  +L+ +Y     +++A++VFD + +  
Sbjct: 139  VLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSR 198

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
                                              D+VSWNS++ G+   GQ   A  +  
Sbjct: 199  ----------------------------------DVVSWNSMIVGFVRLGQISVAQKLFV 224

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
             M       +V++W ++ISG +QN    ++L +F ++ ++ ++PN   + SLL     LG
Sbjct: 225  EMPEK----DVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLG 280

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             L+ GK IH +     F   A + T L+DMY+K G +  +R +F +   K   SWN MI 
Sbjct: 281  TLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMIC 340

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            G A +G G+EA+ LF + L  GF P  +TF  +L AC  +GLV EG  +F  M+  Y I 
Sbjct: 341  GLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIE 400

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P +EHY CMVDLL +AG++ +A + I  MP  PD  +W ++LGSC++HG +E  E    +
Sbjct: 401  PEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNK 460

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L +++P ++ +Y  +  + A   +WEDV ++R  M E     +  WS I+ +  VH F A
Sbjct: 461  LIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVA 520

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
                H  T EIY  L  +   +   GY  +   V  DI+EEEK   +  H+E+LAI +GL
Sbjct: 521  GDKEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEEEKENAIKEHSERLAIAFGL 580

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + TK    IR+IKN RVC DCH  +K +SLV  REI +RDG+RFHHF++G CSC D W
Sbjct: 581  LVTKDGDCIRIIKNLRVCGDCHEVSKIISLVFEREIIVRDGSRFHHFKKGICSCQDYW 638



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 179/366 (48%), Gaps = 14/366 (3%)

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVL 423
           N +I   ++ +   ++I L+  M  S   A ++ T+  +LQAC+   A  EG Q+  +V+
Sbjct: 101 NNMIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVI 160

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAW 482
           K     ++ V N LI +Y    ++E A +VFD +    ++ SWNSMI  +  LG + VA 
Sbjct: 161 KLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQ 220

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
            LF +M     + D+I+W  ++SG   +G  +  L   + +     RPN + +  +L A 
Sbjct: 221 KLFVEMP----EKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAA 276

Query: 543 TELRLLKYGRESHGYILRNGLDYDLY--VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
            +L  L+YG+  H   + N L + +   +GT+L+DMY K  C+  ++ +FD M  ++  +
Sbjct: 277 AQLGTLEYGKRIHS--IANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWS 334

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           WN +I G    GL   A  +  +   +   P  V++  +++  S  G   E       M 
Sbjct: 335 WNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMT 394

Query: 661 NS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
           ++ GI P +  +  ++    +     ++++   +M      P+    +S+L +C   G +
Sbjct: 395 DTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPA---PPDPVLWASVLGSCQVHGFI 451

Query: 720 QNGKEI 725
           + G+EI
Sbjct: 452 ELGEEI 457



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 31/241 (12%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           LT +L+ C+   A   G +V   +IK GF  DV ++ AL++ Y  C  VESA ++F EV 
Sbjct: 136 LTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVP 195

Query: 357 DLEDDLLWNEIIM--VKL-----------------------------RNEKWENAIKLFR 385
              D + WN +I+  V+L                             +N + E A+  F+
Sbjct: 196 SSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFK 255

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
           E+     +     +V +L A A++G    GK+IH            S+   L+ MY++  
Sbjct: 256 ELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCG 315

Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
            ++ +  +FD M + +  SWN MI      G    A +LF K  +    P  +T+  +L+
Sbjct: 316 CIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLT 375

Query: 506 G 506
            
Sbjct: 376 A 376



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 117/271 (43%), Gaps = 6/271 (2%)

Query: 222 KIWNSDDMVK--SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELL 279
           ++ +S D+V   S+I  ++  G  + A K F     +    W + +       GE+++ L
Sbjct: 193 EVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQ-NGELEKAL 251

Query: 280 EVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY 339
           + + EL  + +     IL  +L    +L     G  +H+      F     L  AL++ Y
Sbjct: 252 DYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMY 311

Query: 340 GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
            KC  ++ +  LF  + + +D   WN +I     +   + A+ LF +        ++ T 
Sbjct: 312 AKCGCIDESRFLFDRMPE-KDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTF 370

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
           + +L AC++ G   EGK     +  +  +E  +    C++ + SR   +  A  + + M 
Sbjct: 371 IGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMP 430

Query: 459 -DHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
              +   W S++ S    G++++   + NK+
Sbjct: 431 APPDPVLWASVLGSCQVHGFIELGEEIGNKL 461


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/572 (34%), Positives = 312/572 (54%), Gaps = 40/572 (6%)

Query: 539  LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
            + A  E + L  GR+ H ++++      +Y+ T L+ +YV+   L +A+ V D M  RN+
Sbjct: 48   ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107

Query: 599  VAWNSLISGYCFKGLFVNAKKMLNQM--------------------------EEEEIKPD 632
            V+W ++ISGY   G    A ++  +M                          + E++   
Sbjct: 108  VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSL 167

Query: 633  LVSWN---------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
            +V  N         SL+  Y   G  +EA  +   +       + V+ T++ISG  Q   
Sbjct: 168  VVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPER----DTVSCTAIISGYAQLGL 223

Query: 684  YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
              E+L  F Q+    ++ N  T ++LL +  GL  L  GK++H L L+        +   
Sbjct: 224  DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNS 283

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPD 803
            LIDMYSK G L  +R VF     ++  SWN M+MG+  +G G+E + LF  + E   +PD
Sbjct: 284  LIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPD 342

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
            ++T  A+L+ C + GLV+EG   FD +  + N +  I HY C++DLLG++G L +A D I
Sbjct: 343  SVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLI 402

Query: 864  RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              MPF+P   IWG+LLG+CR+H ++   E+ +++L  +EP N+ NY ++ N+ A +  W+
Sbjct: 403  EHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWK 462

Query: 924  DVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLG 983
            DV R+R  M E  V      SWI +D+++H F +    HP   +I  ++  +  ++K  G
Sbjct: 463  DVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAG 522

Query: 984  YVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAK 1043
            +VPD  CV  D+D+E+K ++LL H+EKLAI +GLM T     I+V+KN R+C DCH  AK
Sbjct: 523  FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAK 582

Query: 1044 YMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++S V GREI LRD  RFH  ++G C+C D W
Sbjct: 583  FVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 173/352 (49%), Gaps = 37/352 (10%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C +  A   G +VHA ++K  +   V+L   L+  Y +C  ++ A  +   + +  + + 
Sbjct: 51  CVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPE-RNVVS 109

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I    ++ +   A++LF  M  +  KA   T+  +L +C    +  + +Q+H  V+
Sbjct: 110 WTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVV 169

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           K+  ES++ V + L+ MY ++  ++ A +VFD + + +  S  ++IS Y  LG  D A  
Sbjct: 170 KTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALD 229

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           LF ++ SS +Q + +T+  L             LT L G+ S                  
Sbjct: 230 LFRQLYSSGMQCNYVTFTTL-------------LTSLSGLAS------------------ 258

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
               L YG++ HG ILR  L + + +  SL+DMY K   L  ++ VFDNM  R+ ++WN+
Sbjct: 259 ----LNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNA 314

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
           ++ GY   G+     ++   M  EE+KPD V+  +++SG S  G   E L I
Sbjct: 315 MLMGYGRHGIGQEVVQLFRTM-TEEVKPDSVTLLAVLSGCSHGGLVDEGLDI 365



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 194/431 (45%), Gaps = 75/431 (17%)

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           + AC +  A  EG+Q+H +++K+     + +   LI +Y R   L+ A  V D M + N+
Sbjct: 48  ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            SW +MIS Y+  G    A  LF +M  +  + +  T   +L+    H S Q V      
Sbjct: 108 VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV------ 161

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                                         + H  +++   +  ++VG+SL+DMY K+  
Sbjct: 162 -----------------------------EQVHSLVVKTNFESHMFVGSSLLDMYGKSGN 192

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
           +Q A++VFD +  R+ V+  ++ISGY   GL   A  +  Q+    ++ + V++ +L++ 
Sbjct: 193 IQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTS 252

Query: 643 YS-----IWGQSKEALVIIHH------MKNS---------------GIYPNV-----VTW 671
            S      +G+    L++         ++NS                ++ N+     ++W
Sbjct: 253 LSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISW 312

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            +++ G  ++   +E ++ F  M +E +KP+S T+ ++L  C   GL+  G +I  L +K
Sbjct: 313 NAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK 371

Query: 732 NGFIKDAYVATG----LIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYGNGK 786
               ++A +  G    +ID+  +SG L+ A ++        T A W  ++    ++ N  
Sbjct: 372 E---QNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVS 428

Query: 787 EAILLFHELLE 797
              ++  +LL+
Sbjct: 429 VGEVVAQKLLD 439



 Score =  103 bits (258), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 141/307 (45%), Gaps = 5/307 (1%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           + L   +  HA M+K  +      +   LI  Y+  G    A         R+   W++ 
Sbjct: 55  QALGEGRQVHAHMVK-ARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAM 113

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +  Y S  G   E LE++  +   G       L  +L  C    +     +VH+ ++K  
Sbjct: 114 ISGY-SQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTN 172

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F+  + +  +L++ YGK  +++ A K+F  + +  D +    II    +    + A+ LF
Sbjct: 173 FESHMFVGSSLLDMYGKSGNIQEARKVFDMLPE-RDTVSCTAIISGYAQLGLDDEALDLF 231

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           R++  S  +    T   +L + + + + + GKQ+HG +L+  L   + + N LI MYS+ 
Sbjct: 232 RQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKC 291

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
            KL  + RVFD+M   +  SWN+M+  Y   G       LF  M +  ++PD +T   +L
Sbjct: 292 GKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVKPDSVTLLAVL 350

Query: 505 SGHFTHG 511
           SG  +HG
Sbjct: 351 SG-CSHG 356


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 657

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/569 (34%), Positives = 308/569 (54%), Gaps = 45/569 (7%)

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL--- 604
            L  G   H +IL NG D D ++ T L+ MY     +  A++VFD  + R I  WN+L   
Sbjct: 93   LSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRA 152

Query: 605  ------------------------------------ISGYCFKGLFVNAKKMLNQMEEEE 628
                                                ++  C        K++   +    
Sbjct: 153  LTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRG 212

Query: 629  IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL 688
                +    +LV  Y+ +G    A  + + M       NVV+W+++I+   +N    E+L
Sbjct: 213  YNSHVYIMTTLVDMYARFGCVDYASYVFNGMP----VRNVVSWSAMIACYAKNGKAFEAL 268

Query: 689  KFFIQMQQE--DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            + F +M  E  D  PNS TM S+LQ C  L  L+ G+ IH   L+ G      V + L+ 
Sbjct: 269  RTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVT 328

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MY + G L   + VF +  ++ + SWN +I  + ++G G++AI +F E+L  G  P  +T
Sbjct: 329  MYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVT 388

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            F ++L AC + GLVEEG + F+SM  D+ I P +EHY+CMVDLLG+A  LDEA   ++ M
Sbjct: 389  FVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 448

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
              +P   +WG+LLGSCRIHG++E AE ASRRLF LEP N+ NY L+ ++ A +  W++V+
Sbjct: 449  RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVK 508

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            R++  ++  G++ +    W+++ + ++ F +    +P   +I+  L  L  +MK+ GY+P
Sbjct: 509  RVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIP 568

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
             T+ V  +++ EEK +++L H+EKLA+ +GL+ T    PIR+ KN R+C DCH   K++S
Sbjct: 569  QTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFIS 628

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
                +EI +RD  RFH F+ G CSC D W
Sbjct: 629  KFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 9/310 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +   LI  Y + G    A K F     R+   W++      +  G  +E+L ++ +++  
Sbjct: 114 LATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL-TLAGHGEEVLGLYWKMNRI 172

Query: 289 GVIFRSRILTIILKLC--TKLMAFWL--GVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           GV       T +LK C  ++  A  L  G E+HA L +RG++  V++   L++ Y +   
Sbjct: 173 GVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGC 232

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM--QFSSAKAISRTIVKM 402
           V+ A+ +F+ +  + + + W+ +I    +N K   A++ FREM  +   +   S T+V +
Sbjct: 233 VDYASYVFNGMP-VRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSV 291

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           LQACA + A  +G+ IHGY+L+  L+S L V + L++MY R  KL++  RVFD M D ++
Sbjct: 292 LQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDV 351

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            SWNS+ISSY   GY   A  +F +M ++   P  +T+  +L      G  +    L   
Sbjct: 352 VSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFES 411

Query: 523 M-QSLGFRPN 531
           M +  G +P 
Sbjct: 412 MWRDHGIKPQ 421



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 177/408 (43%), Gaps = 46/408 (11%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G+ VH  ++  G D D  L   L+  Y     V+ A K+F +        +WN +     
Sbjct: 96  GLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK-RTIYVWNALFRALT 154

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC--AKVGAFH--EGKQIHGYVLKSALE 428
                E  + L+ +M     ++   T   +L+AC  ++  A H  +GK+IH ++ +    
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYN 214

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
           S++ +   L+ MY+R                                G VD A  +FN M
Sbjct: 215 SHVYIMTTLVDMYAR-------------------------------FGCVDYASYVFNGM 243

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSVVLQAVTELR 546
                  ++++W+ +++ +  +G     L   R M  ++    PN  ++  VLQA   L 
Sbjct: 244 PVR----NVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLA 299

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L+ GR  HGYILR GLD  L V ++L+ MY +   L   Q VFD M +R++V+WNSLIS
Sbjct: 300 ALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLIS 359

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIY 665
            Y   G    A ++  +M      P  V++ S++   S  G  +E   +   M ++ GI 
Sbjct: 360 SYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIK 419

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           P V  +  ++    +     E+ K    M+ E   P      SLL +C
Sbjct: 420 PQVEHYACMVDLLGRANRLDEAAKMVQDMRTE---PGPKVWGSLLGSC 464



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/455 (20%), Positives = 187/455 (41%), Gaps = 70/455 (15%)

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N++I    +  K + A+++  +    S +     I+     C    +  +G ++H ++L 
Sbjct: 50  NQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLIL----CCGHRSSLSDGLRVHRHILD 105

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           +  + +  +   LI MYS    ++ A +VFD  +   +  WN++  + T  G+ +    L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTE 544
           + KMN   ++ D  T+  +L                               + V    T 
Sbjct: 166 YWKMNRIGVESDRFTYTYVLK------------------------------ACVASECTA 195

Query: 545 LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             L K G+E H ++ R G +  +Y+ T+L+DMY +  C+  A  VF+ M  RN+V+W+++
Sbjct: 196 DHLTK-GKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAM 254

Query: 605 ISGYCFKGLFVNAKKMLNQM--EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
           I+ Y   G    A +   +M  E ++  P+ V+  S++   +     ++  +I  ++   
Sbjct: 255 IACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRR 314

Query: 663 G---IYP----------------------------NVVTWTSLISGSLQNENYRESLKFF 691
           G   I P                            +VV+W SLIS    +   R++++ F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIF 374

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVATGLIDMYSK 750
            +M      P   T  S+L  C   GL++ GK +   +   +G          ++D+  +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGR 434

Query: 751 SGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGN 784
           +  L  A ++ +    +     W  ++    I+GN
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGN 469



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           LK  +++  ++  P+  T   L+  CG    L +G  +H   L NG  +D ++AT LI M
Sbjct: 62  LKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGM 121

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           YS  G++  AR+VF K+  +T+  WN +     + G+G+E + L+ ++   G + D  T+
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181

Query: 808 TALLAACKNSGLVEE---GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
           T +L AC  S    +     K   +  T       +   + +VD+  + G +D A     
Sbjct: 182 TYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFN 241

Query: 865 TMPFKPDATIWGALLG 880
            MP + +   W A++ 
Sbjct: 242 GMPVR-NVVSWSAMIA 256


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/553 (34%), Positives = 308/553 (55%), Gaps = 40/553 (7%)

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
            ++ NG ++D Y+   ++ M+VK   + +A+ +FD M  RN+V+WN++ISG    G F+ A
Sbjct: 1    MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 618  KKMLNQMEEE-----------------------------------EIKPDLVSWNSLVSG 642
             ++   M EE                                    I  D+    +L+  
Sbjct: 61   FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
            YS  G  ++A  +   M         V W ++I+G   +    E+L  + +M+   +K +
Sbjct: 121  YSKCGSIEDARFVFEEMPEK----TTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMD 176

Query: 703  STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
              T S +++ C  L  +++ K+ H   +++GF  D    T L+D YSK G ++ AR VF 
Sbjct: 177  HFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFD 236

Query: 763  KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
            K A+K + SWN +I G+  +G G EA+ LF ++++    P+ ITF A+L+AC +SGL E 
Sbjct: 237  KMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSER 296

Query: 823  GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
            GW+ F SM  D  I P   HY+CM++L+G+ G LDEA   IR  PFKP A +W ALL +C
Sbjct: 297  GWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTAC 356

Query: 883  RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
            R++ + E  + A+ +L+ +EP    NY +++N+   +   ++   + H++   G++   V
Sbjct: 357  RVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPV 416

Query: 943  WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
             SWI++ +  HVF +    HP   EIY ++  L+ E+ K GYVP+ + +  D+DE+E+ +
Sbjct: 417  CSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEE-R 475

Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
            V L H+EKLAI +GL+ T   AP+++++  R+C DCH A K ++ V GREI +RD  RFH
Sbjct: 476  VRLYHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFH 535

Query: 1063 HFREGECSCNDCW 1075
            HF+ G CSC D W
Sbjct: 536  HFKHGHCSCEDYW 548



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 209/452 (46%), Gaps = 43/452 (9%)

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           +I  GF+FD +++  ++  + KC  +  A +LF E+ +  + + WN II   +    +  
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPE-RNLVSWNTIISGLVDVGDFME 59

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A +LF  M    + A S T   M++A A +     G+Q+H   LK  +  ++ V   LI 
Sbjct: 60  AFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALID 119

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MYS+   +E A  VF+ M +                                      + 
Sbjct: 120 MYSKCGSIEDARFVFEEMPEKT-----------------------------------TVG 144

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           WN +++G+  HG  +  L +   M+  G + +  + S++++    L  +++ +++H  ++
Sbjct: 145 WNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALI 204

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           R+G   D+   T+L+D Y K   +++A+ VFD M ++N+++WN+LI GY   G    A +
Sbjct: 205 RHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVE 264

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGS 678
           +  QM +E + P+ +++ +++S  S  G S+    I   M +++ I P  + +  +I   
Sbjct: 265 LFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELM 324

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK-EIHCLCLKNGFIKD 737
            +     E+L     ++    KP +   ++LL  C      + GK     L        +
Sbjct: 325 GREGLLDEALAL---IRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLN 381

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            Y+   L+++Y+ +GNLK A +V      K L
Sbjct: 382 NYIV--LLNIYNSAGNLKEAADVVHTLKRKGL 411



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF---LEDYESFGGEVQELLEVWGEL 285
           M   ++  +++ G    A + F     R+   W++    L D   F    +  L +W E 
Sbjct: 12  MRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEF 71

Query: 286 HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
              G    S    ++++    L    +G ++HA  +K G   D+ + CAL++ Y KC  +
Sbjct: 72  SDAG----SFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSI 127

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           E A  +F E+ + +  + WN II     +   E A+ ++ EM+ S  K    T   +++ 
Sbjct: 128 EDARFVFEEMPE-KTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRI 186

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
           CA++ +    KQ H  +++    S++     L+  YS+  ++E A  VFD M   N+ SW
Sbjct: 187 CARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISW 246

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           N++I  Y   G    A  LF +M   R+ P+ IT+  +LS 
Sbjct: 247 NALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSA 287


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Cucumis sativus]
          Length = 759

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/689 (32%), Positives = 357/689 (51%), Gaps = 71/689 (10%)

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            G   H YVLK     +  + N ++ MY++N +++LA  +F+ M +  L+ WNSMIS    
Sbjct: 114  GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173

Query: 475  LGYVDVAWSLFNKMNSSRI---------------------------QPDIITWNCLLSGH 507
             G    A  LFN M +  I                           +  +++WN + S +
Sbjct: 174  SGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                  +  L L   M   G  P+ ++  V + + + +            I +  +  + 
Sbjct: 234  AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +V T+L+DM+ K   L+ A+ +FD + ++                               
Sbjct: 294  FVKTALLDMHAKFGNLEIARNIFDELGSQR------------------------------ 323

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                + V+WN ++S Y+  G+   A  +  +M       +VV+W S+I+G  QN     S
Sbjct: 324  ----NAVTWNIMISAYTRVGKLSLARELFDNMPKR----DVVSWNSMIAGYAQNGESAMS 375

Query: 688  LKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            ++ F +M    DI+P+  T++S+L  CG +G L+    +  +  +            LI 
Sbjct: 376  IELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIF 435

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MYSK G++  A  +F+    + + S+N +I GFA  G+GKEAI L   + E G +PD +T
Sbjct: 436  MYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            +  +L AC ++GL+ EG   F S+       PT++HY+CMVDLLG+AG LDEA   I++M
Sbjct: 496  YIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSM 550

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            P KP A ++G+LL + RIH  +   E+A+ +LF+LEP N  NY L+ N+ A   RWEDV+
Sbjct: 551  PMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVK 610

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            R+R  M + G+K  +  SW++    VH F+     H  + +IY  L  L  +MK++G+V 
Sbjct: 611  RVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVA 670

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            D  C  +D++EEEK ++L +H+EKLAI + L+ ++    IRV+KN R+C DCHTA K +S
Sbjct: 671  DKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMIS 730

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             + GREI +RD  RFH F EG CSC+D W
Sbjct: 731  KLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  156 bits (395), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 203/449 (45%), Gaps = 63/449 (14%)

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
            YVD   S+F    +S   PD   ++C+L  +   G++  V++L +   SL  RP     
Sbjct: 51  AYVD---SIF----TSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRP----- 98

Query: 536 SVVLQAVTELRLLKYGRES----HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
               Q    + L+K   +S    H Y+L+ G   D ++  +++DMY KN  +  A+ +F+
Sbjct: 99  ----QPFVYIYLIKLAGKSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFE 154

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE 651
            M  R +  WNS+ISG    G    A  + N M    I    ++W S+V+GY+  G  + 
Sbjct: 155 QMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGDLES 210

Query: 652 ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           A      M       +VV+W ++ S   Q E  +E+L  F QM +E I P+ TT    + 
Sbjct: 211 ARRYFDEMPER----SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTIS 266

Query: 712 TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS--------------- 756
           +C  +G       I  +  +   + +++V T L+DM++K GNL+                
Sbjct: 267 SCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAV 326

Query: 757 -----------------AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE-T 798
                            ARE+F     + + SWN MI G+A  G    +I LF E++   
Sbjct: 327 TWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCM 386

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
             QPD +T  ++L+AC + G ++  +   D +  + NI   I  ++ ++ +  K G + +
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLGISGFNSLIFMYSKCGSVAD 445

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHGH 887
           A    +TM  + D   +  L+     +GH
Sbjct: 446 AHRIFQTMGTR-DVVSFNTLISGFAANGH 473



 Score =  113 bits (282), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 205/495 (41%), Gaps = 97/495 (19%)

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRN 374
           HA ++K G   D  ++ A+++ Y K   V+ A  LF ++++  L D   WN +I      
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLAD---WNSMI------ 168

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES-NLSV 433
                                              G +  G +    VL + + + N+  
Sbjct: 169 ----------------------------------SGCWKSGNETEAVVLFNMMPARNIIT 194

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              +++ Y++   LE A R FD M + ++ SWN+M S+Y        A +LF++M    I
Sbjct: 195 WTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            PD  TW   +S   + G      ++LR +       N    + +L    +   L+  R 
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314

Query: 554 SHGYI--LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
               +   RN + +++ +       Y +   L  A+E+FDNM  R++V+WNS+I+GY   
Sbjct: 315 IFDELGSQRNAVTWNIMISA-----YTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369

Query: 612 G-------LF-------------------------VNAKKM----LNQMEEEEIKPDLVS 635
           G       LF                         + A K+    L+ + E+ IK  +  
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISG 429

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
           +NSL+  YS  G   +A  I   M       +VV++ +LISG   N + +E++K  + M+
Sbjct: 430 FNSLIFMYSKCGSVADAHRIFQTMGTR----DVVSFNTLISGFAANGHGKEAIKLVLTME 485

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           +E I+P+  T   +L  C   GLL  GK +           D Y    ++D+  ++G L 
Sbjct: 486 EEGIEPDHVTYIGVLTACSHAGLLNEGKNV--FKSIQAPTVDHYAC--MVDLLGRAGELD 541

Query: 756 SAREVFRKSANKTLA 770
            A+ + +    K  A
Sbjct: 542 EAKMLIQSMPMKPHA 556



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 20/283 (7%)

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P+   ++ ++    +   + + +  F      +++P       L++  G     ++G   
Sbjct: 63  PDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNMF 117

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
           H   LK G I D ++   ++DMY+K+G +  AR +F + A +TLA WN MI G    GN 
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177

Query: 786 KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            EA++LF+ +       + IT+T+++      G +E   +YFD M        ++  ++ 
Sbjct: 178 TEAVVLFNMMPAR----NIITWTSMVTGYAKMGDLESARRYFDEMPER-----SVVSWNA 228

Query: 846 MVDLLGKAGYLDEAWDFIRTM---PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
           M     +     EA +    M      PD T W   + SC   G    A+   R + +  
Sbjct: 229 MQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH 288

Query: 903 PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV-KSVLVWS 944
                N  +   LL M  ++ ++E  R+  DE+G  ++ + W+
Sbjct: 289 IV--LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWN 329



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 130/307 (42%), Gaps = 33/307 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S++  Y + GD  SA + F     RS   W++    Y       +E L ++ ++  +G+ 
Sbjct: 197 SMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECP-KEALNLFHQMLEEGIT 255

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                  + +  C+ +    L   +   + ++    +  +K AL++ + K  ++E A  +
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315

Query: 352 FSEVSDLEDDLLWNEII-------MVKLRNEKWEN------------------------A 380
           F E+    + + WN +I        + L  E ++N                        +
Sbjct: 316 FDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMS 375

Query: 381 IKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           I+LF+EM      +    TI  +L AC  +GA      +   V +  ++  +S  N LI 
Sbjct: 376 IELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIF 435

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MYS+   +  A R+F +M   ++ S+N++IS +   G+   A  L   M    I+PD +T
Sbjct: 436 MYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495

Query: 500 WNCLLSG 506
           +  +L+ 
Sbjct: 496 YIGVLTA 502



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 7/226 (3%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y   G  + A + F     R    W+S +  Y    GE    +E++ E+     I 
Sbjct: 331 MISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQ-NGESAMSIELFKEMISCMDIQ 389

Query: 293 RSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
              + +  +L  C  + A  L   V   + ++     +    +L+  Y KC  V  A+++
Sbjct: 390 PDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRI 449

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +    D + +N +I     N   + AIKL   M+    +    T + +L AC+  G 
Sbjct: 450 FQTMGT-RDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGL 508

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            +EGK     V KS     +    C++ +  R  +L+ A  +  SM
Sbjct: 509 LNEGKN----VFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSM 550


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic [Vitis vinifera]
          Length = 658

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/600 (34%), Positives = 336/600 (56%), Gaps = 47/600 (7%)

Query: 519  LLRGMQSLGFRPNGS--SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
            L + +Q L   PN +  +  +++ + T    L  G + H +++ +G D D ++ T L++M
Sbjct: 63   LNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINM 122

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSL-----ISGY----------------------- 608
            Y + D + NA++VFD  + R I  WN+L     ++GY                       
Sbjct: 123  YSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTY 182

Query: 609  -----------CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
                        F  L +N +++   +     +  +    +L+  Y+ +G    A  +  
Sbjct: 183  TYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFD 242

Query: 658  HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM--QQEDIKPNSTTMSSLLQTCGG 715
             M       NVV+W+++I+   +N    E+L+ F +M  + +D+ PNS TM S+LQ C  
Sbjct: 243  QMP----VKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAA 298

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            L  L+ GK +H   L+ G      V + L+ +Y++ GNL+    VF +   + + SWN +
Sbjct: 299  LAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSL 358

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I  + I+G G++AI +F E+++ G  P  I+F ++L AC ++GLVEEG   F+SM   + 
Sbjct: 359  ISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHK 418

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P++EHY+CMVDLLG+A  LDEA   I  M  +P   +WG+LLGSCRIH ++E AE A+
Sbjct: 419  IFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERAT 478

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
             RLF+LEP N+ NY L+ ++ A +  W +V+R++  ++  G++ V   S I+I + ++ F
Sbjct: 479  SRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSF 538

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
             +    +P   +++  L  L  EMK+ GYVPDT+ V  D+D EEK +++L H+EKLA+ +
Sbjct: 539  MSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAF 598

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ +K    IR+ KN R+C DCH+  K++S    REI +RD  RFH F++G CSC D W
Sbjct: 599  GLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 191/431 (44%), Gaps = 56/431 (12%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           CT+  +   G+++H  LI  G D D  L   L+N Y +   +++A K+F +        +
Sbjct: 88  CTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRK-RTIYV 146

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF----HEGKQIH 419
           WN +             + L+R M      +   T   +L+AC    AF      G++IH
Sbjct: 147 WNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIH 206

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
           G++L+   E ++ +   L+ MY+R   +  A+RVFD M   N                  
Sbjct: 207 GHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKN------------------ 248

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSV 537
                            +++W+ +++ +  +G     L L R M  ++    PN  ++  
Sbjct: 249 -----------------VVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVS 291

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
           VLQA   L  L+ G+  HGYILR GLD  L V ++L+ +Y +   L+    VF+ M+ R+
Sbjct: 292 VLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRD 351

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           +V+WNSLIS Y   G    A ++  +M ++ + P  +S+ S++   S  G  +E  V+  
Sbjct: 352 VVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFE 411

Query: 658 HM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
            M +   I+P+V  +  ++    +     E+ K    M+   I+P      SLL +C   
Sbjct: 412 SMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMR---IEPGPKVWGSLLGSC--- 465

Query: 717 GLLQNGKEIHC 727
                   IHC
Sbjct: 466 -------RIHC 469



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 189/397 (47%), Gaps = 43/397 (10%)

Query: 149 FNTRTSINQN---RHSHKPNSITNSPTS-LALPPTDT----------------LAKQAQL 188
           F T  +I Q    +  HKP +I+  P   LAL P+ T                L KQ  L
Sbjct: 4   FQTPQTIQQPHLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQGNL 63

Query: 189 S----CISSGFCFLNETNKFRCLSSVKSK--------HAQMIKMGKIWNSDDMVKS-LIF 235
           +     +S        T +   LS  +          H  +I  G   + D  + + LI 
Sbjct: 64  NQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGS--DQDPFLATKLIN 121

Query: 236 HYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSR 295
            Y E     +A K F     R+   W++      +  G  +E+L+++  ++  GV     
Sbjct: 122 MYSELDSIDNARKVFDKTRKRTIYVWNALFRAL-TLAGYGREVLDLYRRMNRIGVPSDRF 180

Query: 296 ILTIILKLCTKLMAF----WLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
             T +LK C    AF      G E+H  +++ GF+  VH+   L++ Y +   V +A+++
Sbjct: 181 TYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRV 240

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI--SRTIVKMLQACAKV 409
           F ++  +++ + W+ +I    +N K   A++LFR+M   +   +  S T+V +LQACA +
Sbjct: 241 FDQMP-VKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAAL 299

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
            A  +GK +HGY+L+  L+S L V + L+++Y+R   LEL  RVF+ M+  ++ SWNS+I
Sbjct: 300 AALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLI 359

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           SSY   G+   A  +F +M    + P  I++  +L  
Sbjct: 360 SSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGA 396


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/573 (34%), Positives = 313/573 (54%), Gaps = 40/573 (6%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            ++ A    R L   R  H ++  +     +++  SL+ +Y K   + +A+ VFD M  R+
Sbjct: 70   LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--------------- 642
            + +W SLI+GY    +   A  +L  M     KP+  ++ SL+                 
Sbjct: 130  MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 643  --------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                                Y+  G+   A+ +   +++     N V+W +LI+G  +  
Sbjct: 190  LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK----NGVSWNALIAGFARKG 245

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
            +   +L  F +MQ+   +    T SS+     G+G L+ GK +H   +K+G    A+V  
Sbjct: 246  DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             ++DMY+KSG++  AR+VF +   K + +WN M+  FA YG G+EA+  F E+ + G   
Sbjct: 306  TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + ITF ++L AC + GLV+EG +YFD M  +YN+ P I+HY  +VDLLG+AG L++A  F
Sbjct: 366  NQITFLSILTACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MP KP A +WGALLGSCR+H + +  + A+  +F+L+P ++    L+ N+ A + +W
Sbjct: 425  IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQW 484

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            +   R+R  M   GVK     SW++I+  VH+F A    HP + EIY +   +  +++K 
Sbjct: 485  DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA 544

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVP+T  V   +DE+E+   L  H+EK+A+ + L+     A IR++KN R+C DCH+A 
Sbjct: 545  GYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAF 604

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +Y+S V  REI +RD  RFHHF  G CSC D W
Sbjct: 605  RYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 182/419 (43%), Gaps = 39/419 (9%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R+   ++  C +  +      +HA L    F   V L  +L++ Y KC  V  A ++F  
Sbjct: 65  RLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDG 124

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           +    D   W  +I    +N+  + A+ L   M     K    T   +L+A     +   
Sbjct: 125 MP-ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGI 183

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+QIH   +K     ++ V + L+ MY+R  ++++A  VFD ++  N  SWN++I+ +  
Sbjct: 184 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFA- 242

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                                               G  +  L +   MQ  GF     +
Sbjct: 243 ----------------------------------RKGDGETTLLMFAEMQRNGFEATHFT 268

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            S V  A+  +  L+ G+  H +++++G     +VG +++DMY K+  + +A++VFD + 
Sbjct: 269 YSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVD 328

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
            +++V WNS+++ +   GL   A     +M +  +  + +++ S+++  S  G  KE   
Sbjct: 329 KKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388

Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               MK   + P +  + +++    +     ++L F  +M    +KP +    +LL +C
Sbjct: 389 YFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP---MKPTAAVWGALLGSC 444



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 178/425 (41%), Gaps = 67/425 (15%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A  R    ++ ACA+  +  + + IH ++  S    ++ + N LI +Y +   +  A RV
Sbjct: 62  ATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRV 121

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
                                          F+ M +     D+ +W  L++G+  +   
Sbjct: 122 -------------------------------FDGMPAR----DMCSWTSLIAGYAQNDMP 146

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              L LL GM    F+PNG + + +L+A         G + H   ++     D+YVG++L
Sbjct: 147 DEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSAL 206

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           +DMY +   +  A  VFD ++++N V+WN+LI+G+  KG       M  +M+    +   
Sbjct: 207 LDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATH 266

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNSG-------------IYP-------------- 666
            +++S+ S  +  G  ++   +  HM  SG             +Y               
Sbjct: 267 FTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDR 326

Query: 667 ----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               +VVTW S+++   Q    RE++  F +M++  +  N  T  S+L  C   GL++ G
Sbjct: 327 VDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEG 386

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAI 781
           K+   +  +     +      ++D+  ++G L  A   +F+     T A W  ++    +
Sbjct: 387 KQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRM 446

Query: 782 YGNGK 786
           + N K
Sbjct: 447 HKNAK 451



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 12/313 (3%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
           ++R L   ++ HA +    +   S  +  SLI  Y + G    A + F    +R    W+
Sbjct: 76  RYRSLDDARAIHAHLAG-SQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWT 134

Query: 263 SFLEDYESFGGEVQELLEVWGELHGK----GVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
           S +  Y       + L  + G L G+    G  F S     +LK      +  +G ++HA
Sbjct: 135 SLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFAS-----LLKAAGASASSGIGEQIHA 189

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
             +K  +  DV++  AL++ Y +C  ++ A  +F ++   ++ + WN +I    R    E
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLES-KNGVSWNALIAGFARKGDGE 248

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
             + +F EMQ +  +A   T   +  A A +GA  +GK +H +++KS    +  V N ++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY+++  +  A +VFD +   ++ +WNSM++++   G    A + F +M    +  + I
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 499 TWNCLLSGHFTHG 511
           T+  +L+   +HG
Sbjct: 369 TFLSILTA-CSHG 380



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 8/176 (4%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           SL+  C     L + + IH     + F    ++   LI +Y K G +  AR VF     +
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL---AACKNSGLVEEGW 824
            + SW  +I G+A      EA+ L   +L   F+P+  TF +LL    A  +SG+ E+  
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ-- 186

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
               +++  Y+    +   S ++D+  + G +D A      +  K +   W AL+ 
Sbjct: 187 --IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK-NGVSWNALIA 239



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 6/260 (2%)

Query: 214 HAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA  +K    W+ D  V S L+  Y   G    A   F    S++   W++ +  +    
Sbjct: 188 HALTVKYD--WHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR-K 244

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+ +  L ++ E+   G        + +      + A   G  VHA +IK G      + 
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             +++ Y K   +  A K+F  V D +D + WN ++    +      A+  F EM+    
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRV-DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 363

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA-T 451
                T + +L AC+  G   EGKQ    + +  LE  +     ++ +  R   L  A  
Sbjct: 364 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALV 423

Query: 452 RVFDSMKDHNLSSWNSMISS 471
            +F        + W +++ S
Sbjct: 424 FIFKMPMKPTAAVWGALLGS 443


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/570 (35%), Positives = 318/570 (55%), Gaps = 33/570 (5%)

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQE 588
            P+ +  S +L+  T L  ++ GR  H +++ +  LD  L +   +++MY K  CL +A+ 
Sbjct: 85   PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 589  VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------- 641
            +FD M  +++V W +LI+G+       +A  +  QM     +P+  + +SL+        
Sbjct: 145  MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204

Query: 642  --------------GYSIWGQSKEALVIIH----HMKNSGI------YPNVVTWTSLISG 677
                          GY        ALV ++    HM  + +        + V+W +LISG
Sbjct: 205  LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 678  SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
              +      +L    +MQ+++ +P   T SS+L  C  +G L+ GK +H   +K+G    
Sbjct: 265  HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 738  AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
            A++   L+DMY+K+G++  A+ VF +     + SWN M+ G A +G GKE +  F ++L 
Sbjct: 325  AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 798  TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
             G +P+ I+F  +L AC +SGL++EG  YF+ M   Y + P + HY   VDLLG+ G LD
Sbjct: 385  IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLD 443

Query: 858  EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
             A  FIR MP +P A +WGALLG+CR+H ++E    A+ R F+L+P +S    L+ N+ A
Sbjct: 444  RAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYA 503

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             + RW DV ++R  M E GVK     SW++I+  VH+F A    HP   EI  +   +  
Sbjct: 504  SAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISG 563

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            ++K++GYVPDT  V   +D++E+ + L  H+EKLA+ + L+ T + +PIR+ KN RVC D
Sbjct: 564  KIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGD 623

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            CH A K++S V  REI +RD  RFH FR+G
Sbjct: 624  CHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 188/415 (45%), Gaps = 40/415 (9%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDL 358
           +LK CT+L     G  VHA L+   F D  + L+  ++N Y KC  ++ A ++F E+   
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP-T 151

Query: 359 EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
           +D + W  +I    +N +  +A+ LF +M     +    T+  +L+A         G Q+
Sbjct: 152 KDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQL 211

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H + LK   +S++ V + L+ MY+R   ++ A   FD M   +  SWN++IS +   G  
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEG 271

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
           + A  L  KM     QP           HFT+ S                         V
Sbjct: 272 EHALHLLWKMQRKNFQP----------THFTYSS-------------------------V 296

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           L A   +  L+ G+  H +++++GL    ++G +L+DMY K   + +A+ VFD +   ++
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
           V+WN++++G    GL         QM    I+P+ +S+  +++  S  G   E L     
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416

Query: 659 MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           MK   + P+V  + + +    +      + +F  +M    I+P +    +LL  C
Sbjct: 417 MKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP---IEPTAAVWGALLGAC 468



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 189/417 (45%), Gaps = 68/417 (16%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           K+L+ C ++G   +G+ +H +++ S  L+++L + N +++MY++                
Sbjct: 92  KLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAK---------------- 135

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
                           G +D A  +F++M +     D++TW  L++G   +   ++ L L
Sbjct: 136 ---------------CGCLDDARRMFDEMPTK----DMVTWTALIAGFSQNNRPRDALLL 176

Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
              M  LGF+PN  ++S +L+A      L  G + H + L+ G    +YVG++L+DMY +
Sbjct: 177 FPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYAR 236

Query: 580 NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
              +  AQ  FD M  ++ V+WN+LISG+  KG   +A  +L +M+ +  +P   +++S+
Sbjct: 237 CGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296

Query: 640 VSGYSIWGQSKEALVIIHHMKNSG-------------------------------IYPNV 668
           +S  +  G  ++   +  HM  SG                               + P+V
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           V+W ++++G  Q+   +E+L  F QM +  I+PN  +   +L  C   GLL  G     L
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGN 784
             K     D       +D+  + G L  A    R+     T A W  ++    ++ N
Sbjct: 417 MKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 146/310 (47%), Gaps = 2/310 (0%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR 256
            L E  +   +   +  HA ++    + N   +   ++  Y + G    A + F    ++
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
               W++ +  + S     ++ L ++ ++   G       L+ +LK          G ++
Sbjct: 153 DMVTWTALIAGF-SQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQL 211

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
           HA  +K G+   V++  AL++ Y +C  +++A   F  +   + ++ WN +I    R  +
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP-TKSEVSWNALISGHARKGE 270

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
            E+A+ L  +MQ  + +    T   +L ACA +GA  +GK +H +++KS L+    + N 
Sbjct: 271 GEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNT 330

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           L+ MY++   ++ A RVFD +   ++ SWN+M++     G        F +M    I+P+
Sbjct: 331 LLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPN 390

Query: 497 IITWNCLLSG 506
            I++ C+L+ 
Sbjct: 391 EISFLCVLTA 400


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330-like
            [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330-like
            [Cucumis sativus]
          Length = 868

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 228/779 (29%), Positives = 398/779 (51%), Gaps = 77/779 (9%)

Query: 261  WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
            W+S +  Y    G++Q+ + V+ ++   GV+F    L + LK+C+ L    LG+++H   
Sbjct: 125  WNSLISGYLQ-NGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIA 183

Query: 321  IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
            ++ GFD+DV    AL++ Y KC  +E +  +FSE+ D ++ + W+  I   ++N++    
Sbjct: 184  VQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPD-KNWISWSAAIAGCVQNDQLLRG 242

Query: 381  IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
            +KLF+EMQ         T   + ++CA + A   G Q+H + LK+   S++ V    + M
Sbjct: 243  LKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDM 302

Query: 441  YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
            Y++ + +  A ++F  + DHNL S+N+MI  Y        A+ LF ++  +    D ++ 
Sbjct: 303  YAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS- 361

Query: 501  NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
               LSG                           S + V++  +E      G + HG  ++
Sbjct: 362  ---LSGAL-------------------------SAAAVIKGHSE------GLQLHGLAIK 387

Query: 561  NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS-------------- 606
            + L  ++ V  +++DMY K   L  A  +FD M+ R+ V+WN++I+              
Sbjct: 388  SNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSH 447

Query: 607  ----------------GYCFKGL-----FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
                            G   K       F N  ++  ++ +  +   +   ++LV  YS 
Sbjct: 448  FGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSK 507

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
             G  +EA  I + ++       +V+W ++ISG    +   +S +FF  M +  ++P++ T
Sbjct: 508  CGMMEEAEKIHYRLEEQ----TMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFT 563

Query: 706  MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
             +++L TC  L  +  GK+IH   +K   + D Y+ + L+DMYSK GN+  +  +FRK+ 
Sbjct: 564  YATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP 623

Query: 766  NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
             +   +WN MI GFA +G G+EA+ LF  +L    +P+  TF ++L AC + G  ++G  
Sbjct: 624  KRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLF 683

Query: 826  YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
            YF  M++ Y + P +EHYSCMVD+LG++G ++EA   I+ MPF+ DA IW  LL  C+I 
Sbjct: 684  YFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQ 743

Query: 886  GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSW 945
            G++E AE A+  L KL+P +S+ Y L+ N+ A +  W+ V ++R +M    +K     SW
Sbjct: 744  GNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSW 803

Query: 946  IQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV-YQDIDEEEKGKV 1003
            I++   VH F      HP    IY  L  L+ +M++ G  P+   +  ++++E    KV
Sbjct: 804  IEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEIDTIQVEEVEENRHQKV 862



 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 155/659 (23%), Positives = 277/659 (42%), Gaps = 99/659 (15%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           +  + I + C+   A   G E HA +I  GF   V +   L+  Y KC  +E A K+F E
Sbjct: 25  KTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEE 84

Query: 355 VSDLE-------------------------------DDLLWNEIIMVKLRNEKWENAIKL 383
           +   +                               D + WN +I   L+N   + +I +
Sbjct: 85  MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F +M+         T+   L+ C+ +     G QIHG  ++   + ++   + L+ MY++
Sbjct: 145 FLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
            N LE +  VF  + D N  SW++ I+                               C+
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIA------------------------------GCV 234

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
            +     G     L L + MQ  G   + S+ + V ++   L   + G + H + L+   
Sbjct: 235 QNDQLLRG-----LKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDF 289

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D+ VGT+ +DMY K D + +A ++F  + + N+ ++N++I GY        A K+  Q
Sbjct: 290 GSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQ 349

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV--------------- 668
           +++     D VS +  +S  ++     E L +      S +  N+               
Sbjct: 350 LQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGA 409

Query: 669 ----------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                           V+W ++I+   QNE+  ++L  F  M +  ++P+  T  S+L+ 
Sbjct: 410 LVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKA 469

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
           C G     NG E+H   +K+G     +V + L+DMYSK G ++ A ++  +   +T+ SW
Sbjct: 470 CAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSW 529

Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
           N +I GF++    +++   F  +LE G +PD  T+  +L  C N   V  G K   +   
Sbjct: 530 NAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLG-KQIHAQMI 588

Query: 833 DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
              ++  +   S +VD+  K G + ++    R  P K D+  W A++     HG  E A
Sbjct: 589 KLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP-KRDSVTWNAMICGFAYHGLGEEA 646



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/579 (23%), Positives = 262/579 (45%), Gaps = 82/579 (14%)

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
           +T   + Q C+   A   GK+ H +++ S     + V NCLI MY +   LE A +VF+ 
Sbjct: 25  KTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEE 84

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
           M   ++ SWN+M+    G G +++A ++FN M       D+++WN L+SG+  +G  Q  
Sbjct: 85  MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPH---HGDVVSWNSLISGYLQNGDIQKS 141

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           + +   M+ LG   + ++++V L+  + L     G + HG  ++ G DYD+  G++L+DM
Sbjct: 142 IAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDM 201

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
           Y K + L+++ +VF  + ++N ++W++ I+G       +   K+  +M+ + I     ++
Sbjct: 202 YAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTY 261

Query: 637 NSLVSGYSIWGQSKEALVI-IHHMKNS----------------------------GIYP- 666
            S+    +    S+    +  H +K                               + P 
Sbjct: 262 ASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPD 321

Query: 667 -NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            N+ ++ ++I G  +NE   ++ K F+Q+Q+     +  ++S  L     +     G ++
Sbjct: 322 HNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQL 381

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
           H L +K+    +  VA  ++DMY K G L  A  +F +   +   SWN +I       + 
Sbjct: 382 HGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESE 441

Query: 786 KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF-DSMSTDYNIIPT---IE 841
            + +  F  +L +  +PD  T+ ++L AC        G + F + M     II +   ++
Sbjct: 442 GKTLSHFGAMLRSKMEPDEFTYGSVLKACA-------GQRAFSNGMEVHGRIIKSGMGLK 494

Query: 842 HY--SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            +  S +VD+  K G ++EA                       +IH             +
Sbjct: 495 MFVGSALVDMYSKCGMMEEAE----------------------KIH-------------Y 519

Query: 900 KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
           +LE     ++N +++  ++  + ED +R    M E+GV+
Sbjct: 520 RLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVE 558


>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 642

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/604 (34%), Positives = 328/604 (54%), Gaps = 35/604 (5%)

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLS--GHFTHGSYQN-VLTLLRGMQSLG-FRPNGS 533
            +D A ++F +M     +P+   WN +L           Q+  L L   M   G  +PN  
Sbjct: 68   IDYARAVFRQMP----EPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRF 123

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            +   VL+A      L+ G++ HG I++ G   D +V ++L+ MYV    +++A  +F   
Sbjct: 124  TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF--- 180

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--LVSWNSLVSGYSIWGQSKE 651
              +N+V ++    G C             QME ++ K D  +V WN ++ G    G  K 
Sbjct: 181  -CKNVVDFD----GSC-------------QMELDKRKQDGNVVLWNIMIDGQVRLGDIKS 222

Query: 652  ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
            A  +   M       +VV+W  +ISG  QN ++ E++  F +MQ  +I PN  T+ S+L 
Sbjct: 223  AKNLFDEMPQR----SVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLP 278

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
                +G L+ GK IH    KN    D  + + L+DMYSK G++  A +VF     +   +
Sbjct: 279  AIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAIT 338

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            W+ +I  FA++G  ++AI+ FH + + G  P+ + +  +L+AC ++GLVEEG  +F  M 
Sbjct: 339  WSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMV 398

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
                + P IEHY CMVDLLG+AG+L+EA + IR MP +PD  IW ALLG+C++H +L+  
Sbjct: 399  KVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMG 458

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E  +  L +L P +S +Y  + NL A    WE V R+R  M  + ++     SWI+I  I
Sbjct: 459  ERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGI 518

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKL 1011
            +H F  E   H    EI   L  +  +++  GY P+T  V+ + DE+E+ + L  H+EK+
Sbjct: 519  IHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKI 578

Query: 1012 AIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            A+ +GL+ T  + P++++KN R+C DCH + K +SL+  R+I +RD  RFH F  G CSC
Sbjct: 579  AVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSC 638

Query: 1072 NDCW 1075
             D W
Sbjct: 639  MDYW 642



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 215/468 (45%), Gaps = 31/468 (6%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYG-KCRDVESANKLFSEVSDLEDDLLWNEI--IMVK 371
           ++HA  IK G   D      ++ F     RD++ A  +F ++ +  +   WN I  ++ +
Sbjct: 37  QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPE-PNCFCWNTILRVLAE 95

Query: 372 LRNEKWEN-AIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
             +E  ++ A+ LF  M        +R T   +L+ACA+     EGKQIHG ++K     
Sbjct: 96  TNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHE 155

Query: 430 NLSVCNCLISMYSRNNKLELATRVF---------------DSMK-DHNLSSWNSMISSYT 473
           +  V + L+ MY     +E A  +F               D  K D N+  WN MI    
Sbjct: 156 DEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQV 215

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
            LG +  A +LF++M     Q  +++WN ++SG+  +G +   + L + MQS    PN  
Sbjct: 216 RLGDIKSAKNLFDEMP----QRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYV 271

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           ++  VL A+  +  L+ G+  H Y  +N ++ D  +G++L+DMY K   +  A +VF+ +
Sbjct: 272 TLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETL 331

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
             RN + W+++I  +   G   +A    + M +  + P+ V++  ++S  S  G  +E  
Sbjct: 332 PKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGR 391

Query: 654 VIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
               HM K  G+ P +  +  ++    +  +  E+ +    M    I+P+     +LL  
Sbjct: 392 SFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMP---IEPDDVIWKALLGA 448

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           C     L+ G+ +    L      D+     L ++Y+  GN ++   V
Sbjct: 449 CKMHKNLKMGERV-AETLMELAPHDSGSYVALSNLYASLGNWEAVARV 495



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 147/347 (42%), Gaps = 51/347 (14%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           +K  HA  IK G+I +     + + F      D   A   F      +   W++ L    
Sbjct: 35  LKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLA 94

Query: 270 SFGGE--VQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
               E    E L ++  +   G +  +R     +LK C +      G ++H  ++K GF 
Sbjct: 95  ETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFH 154

Query: 327 FD---------VHLKCALM------------NFYGKCR---------------------- 343
            D         +++ CA+M            +F G C+                      
Sbjct: 155 EDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQ 214

Query: 344 ----DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
               D++SA  LF E+      + WN +I    +N  +  AI LF+EMQ S+      T+
Sbjct: 215 VRLGDIKSAKNLFDEMPQ-RSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTL 273

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           V +L A A++GA   GK IH Y  K+ +E +  + + L+ MYS+   ++ A +VF+++  
Sbjct: 274 VSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPK 333

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            N  +W+++I ++   G  + A   F+ M  + + P+ + +  +LS 
Sbjct: 334 RNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYS-KSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           K++H + +K G I+D   A  +I   +  S ++  AR VFR+        WN ++   A 
Sbjct: 36  KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAE 95

Query: 782 YGN---GKEAILLFHELLETG-FQPDAITFTALLAACKNSGLVEEG 823
             +     EA++LF  +L  G  +P+  TF ++L AC  +  + EG
Sbjct: 96  TNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREG 141


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/567 (34%), Positives = 313/567 (55%), Gaps = 40/567 (7%)

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            + +L+  T  +LL  GR  H +IL++   +D+ +G +L++MY K   L+ A++VF+ M  
Sbjct: 64   NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG------------- 642
            R+ V W +LISGY       +A    NQM      P+  + +S++               
Sbjct: 124  RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 643  ----------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                                  Y+ +G   +A ++   +++     N V+W +LI+G  +
Sbjct: 184  HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHAR 239

Query: 681  NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
                 ++L+ F  M ++  +P+  + +SL   C   G L+ GK +H   +K+G    A+ 
Sbjct: 240  RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299

Query: 741  ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
               L+DMY+KSG++  AR++F + A + + SWN ++  +A +G GKEA+  F E+   G 
Sbjct: 300  GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359

Query: 801  QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            +P+ I+F ++L AC +SGL++EGW Y++ M  D  I+P   HY  +VDLLG+AG L+ A 
Sbjct: 360  RPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRAL 418

Query: 861  DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
             FI  MP +P A IW ALL +CR+H + E    A+  +F+L+P +   + ++ N+ A   
Sbjct: 419  RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478

Query: 921  RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
            RW D  R+R  M E GVK     SW++I+  +H+F A    HP   EI  +   +++++K
Sbjct: 479  RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538

Query: 981  KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
            +LGYVPDT  V   +D++E+   L  H+EK+A+ + L+ T   + I + KN RVC DCHT
Sbjct: 539  ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHT 598

Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREG 1067
            A K  S V GREI +RD  RFHHF++ 
Sbjct: 599  AIKLASKVVGREIIVRDTNRFHHFKDA 625



 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 197/430 (45%), Gaps = 39/430 (9%)

Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
           +L G  +    R    +LK CT       G  VHA +++  F  D+ +   L+N Y KC 
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
            +E A K+F ++    D + W  +I    ++++  +A+  F +M          T+  ++
Sbjct: 110 SLEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +A A       G Q+HG+ +K   +SN+ V + L+ +Y+R                    
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR-------------------- 208

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
                       G +D A  +F+ + S     + ++WN L++GH      +  L L +GM
Sbjct: 209 -----------YGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGM 253

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
              GFRP+  S + +  A +    L+ G+  H Y++++G     + G +L+DMY K+  +
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            +A+++FD +  R++V+WNSL++ Y   G    A     +M    I+P+ +S+ S+++  
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
           S  G   E       MK  GI P    + +++    +  +   +L+F  +M    I+P +
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTA 430

Query: 704 TTMSSLLQTC 713
               +LL  C
Sbjct: 431 AIWKALLNAC 440



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 177/364 (48%), Gaps = 36/364 (9%)

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +  S+  H++   N++++ Y   G ++ A  +F KM     Q D +TW  L+SG+  H  
Sbjct: 86  ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP----QRDFVTWTTLISGYSQHDR 141

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
             + L     M   G+ PN  ++S V++A    R    G + HG+ ++ G D +++VG++
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
           L+D+Y +   + +AQ VFD +++RN V+WN+LI+G+  +     A ++   M  +  +P 
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261

Query: 633 LVSWNSLVSGYSIWG-------------QSKEALVIIH-------HMKNSGIYP------ 666
             S+ SL    S  G             +S E LV          + K+  I+       
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321

Query: 667 -----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
                +VV+W SL++   Q+   +E++ +F +M++  I+PN  +  S+L  C   GLL  
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381

Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWNCMIMGFA 780
           G   + L  K+G + +A+    ++D+  ++G+L  A R +       T A W  ++    
Sbjct: 382 GWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441

Query: 781 IYGN 784
           ++ N
Sbjct: 442 MHKN 445



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 145/287 (50%), Gaps = 8/287 (2%)

Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
           +N+L+       L +  + +   + +   + D+V  N+L++ Y+  G  +EA  +   M 
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                 + VTWT+LISG  Q++   ++L FF QM +    PN  T+SS+++         
Sbjct: 123 QR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
            G ++H  C+K GF  + +V + L+D+Y++ G +  A+ VF    ++   SWN +I G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-WKYFDSMSTDYNIIPT 839
                ++A+ LF  +L  GF+P   ++ +L  AC ++G +E+G W +   + +   ++  
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
               + ++D+  K+G + +A      +  K D   W +LL +   HG
Sbjct: 299 AG--NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHG 342



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 112/514 (21%), Positives = 213/514 (41%), Gaps = 56/514 (10%)

Query: 164 PNSITNSPTSLALPPTDTLAKQA----QLSCISSGFCFLNETNK----FRCLSSVKSKHA 215
           P S  +   SL  P  D L + +    + S I +   F N   K    F+ L   +  HA
Sbjct: 25  PVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHA 84

Query: 216 QMIKMGKIWNSDD-MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
            +++   I+  D  M  +L+  Y + G    A K F     R +  W++ +  Y      
Sbjct: 85  HILQ--SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP 142

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
              LL  + ++   G       L+ ++K          G ++H   +K GFD +VH+  A
Sbjct: 143 CDALL-FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ Y +   ++ A  +F  +    +D+ WN +I    R    E A++LF+ M     + 
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALES-RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP 260

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              +   +  AC+  G   +GK +H Y++KS  +      N L+ MY+++  +  A ++F
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D +   ++ SWNS++++Y   G+   A   F +M                          
Sbjct: 321 DRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM-------------------------- 354

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                    + +G RPN  S   VL A +   LL  G   +  + ++G+  + +   +++
Sbjct: 355 ---------RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVV 405

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVA-WNSLISG---YCFKGLFVNAKKMLNQMEEEEIK 630
           D+  +   L  A    + M      A W +L++    +    L   A + + +++ ++  
Sbjct: 406 DLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPG 465

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           P ++ +N   SG    G+  +A  +   MK SG+
Sbjct: 466 PHVILYNIYASG----GRWNDAARVRKKMKESGV 495


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like
            [Brachypodium distachyon]
          Length = 682

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/641 (32%), Positives = 349/641 (54%), Gaps = 38/641 (5%)

Query: 466  NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
            N +I+ Y   G + +A  +F+ M S     + ++ N L+SG+ + G + + L LL+    
Sbjct: 49   NHLIAFYGKCGRLGLARQMFDAMPSR----NAVSGNLLMSGYASAGRHSDALALLKAAD- 103

Query: 526  LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
              F  N   +S  L A   +R    GR+ HGY +++GL    YV  +++ MY +   +++
Sbjct: 104  --FSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVED 161

Query: 586  AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--------- 636
            A +VF+N+   +I A+NS+I+G+   G F  + +++  M  E  + D VS+         
Sbjct: 162  AVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCAS 221

Query: 637  -NSLVSGYSIWGQS-----------KEALVIIHHMKNSG--------IYP--NVVTWTSL 674
               L+ G  +  Q+             ALV ++   +          + P  NVV+WT++
Sbjct: 222  TKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAV 281

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            ++   QNE + ++L+ F+ ++ E ++PN  T +  L +C GL  L+NG  +    +K G 
Sbjct: 282  MTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGH 341

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
                 V   L++MYSKSG++  A  VF     + + SWN +I+G+A +G  +EA+ +FH+
Sbjct: 342  WGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHD 401

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            +L     P  +TF  +L AC   GLV+EG  Y + M  +  I P  EHY+CMV LL +AG
Sbjct: 402  MLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAG 461

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             LDEA  FI +     D   W +LL SC+++ +       + ++ +L+P +   Y L+ N
Sbjct: 462  RLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSN 521

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A +NRW+ V ++R  M E GV+     SWIQ+   VHVF++E   H    +I  +L  
Sbjct: 522  MYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKLKE 581

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            L+ ++K +GYVP+   V  D++ E+K + L+ H+EK+A+ +GL+ +     IR++KN R+
Sbjct: 582  LIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRI 641

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH A K +S+V  R+I +RD  RFH   +G CSC+D W
Sbjct: 642  CDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 226/520 (43%), Gaps = 88/520 (16%)

Query: 302 KLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDD 361
           +LCT       G  +HA +I R   FDV     L+ FYGKC  +  A ++F  +    + 
Sbjct: 26  ELCT-------GKAIHAQMI-RAAHFDVIQHNHLIAFYGKCGRLGLARQMFDAMPS-RNA 76

Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
           +  N ++       +  +A+ L +   FS  + +  T    L A A V ++  G+Q HGY
Sbjct: 77  VSGNLLMSGYASAGRHSDALALLKAADFSLNEYVLST---ALSAAAHVRSYGMGRQCHGY 133

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            +KS L+ +  VCN ++ MY +   +E A +VF+++   ++ ++NSMI+ +  LG  D +
Sbjct: 134 AVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGS 193

Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
             +   M     Q D +++  +L GH                                 +
Sbjct: 194 IRIVRSMVGEVEQWDHVSYVAVL-GHCA-------------------------------S 221

Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
             EL L   G + H   L+  L+ ++YVG++L+DMY K DC ++A   F+ +  +N+V+W
Sbjct: 222 TKELLL---GCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSW 278

Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------- 636
            ++++ Y     F +A ++   +E E ++P+  ++                         
Sbjct: 279 TAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMK 338

Query: 637 ----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
                     N+L++ YS  G   +A  +   M     + +VV+W S+I G   +   RE
Sbjct: 339 TGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMP----WRDVVSWNSVIIGYAHHGLARE 394

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA-TGLI 745
           ++  F  M   +I P+  T   +L  C  LGL+  G     + +K   IK      T ++
Sbjct: 395 AMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMV 454

Query: 746 DMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGN 784
            +  ++G L  A + +        + +W  ++    +Y N
Sbjct: 455 GLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKN 494



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 154/329 (46%), Gaps = 36/329 (10%)

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTI----------ILKLCTKLMAFWLGVEV 316
           D  +F   +   L++ GE  G   I RS +  +          +L  C       LG +V
Sbjct: 173 DIFAFNSMINGFLDL-GEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQV 231

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKC---RDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           HA  +KR  + +V++  AL++ YGKC   RD  SA ++  E    ++ + W  ++    +
Sbjct: 232 HAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPE----KNVVSWTAVMTAYTQ 287

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           NE++E+A++LF +++    +    T    L +CA + A   G  +    +K+     LSV
Sbjct: 288 NERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSV 347

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
           CN L++MYS++  +  A RVF SM   ++ SWNS+I  Y   G    A  +F+ M  + I
Sbjct: 348 CNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEI 407

Query: 494 QPDIITW-----NCLLSGHFTHG-SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
            P  +T+      C   G    G  Y N++     M+ +G +P     + ++       L
Sbjct: 408 VPSYVTFVGVLLACAQLGLVDEGLYYLNIM-----MKEMGIKPGREHYTCMVGL-----L 457

Query: 548 LKYGR--ESHGYILRNGLDYDLYVGTSLM 574
            + GR  E+  +IL N +  D+    SL+
Sbjct: 458 CRAGRLDEAEQFILSNCIGTDVVAWKSLL 486


>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
          Length = 811

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/763 (29%), Positives = 392/763 (51%), Gaps = 42/763 (5%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           R LS+ K  HA+++K G  +  ++ +++ L+  Y +      A   F     R+   W++
Sbjct: 64  RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAA 123

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +   +   G  +  L  + E+    +   + ++  + K C  L     G  VH  +IK 
Sbjct: 124 II-GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKA 182

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G +  V +  +L + YGKC  ++ A K+F E+ +  + + WN +++  ++N   E AI+L
Sbjct: 183 GLEDCVFVASSLADMYGKCGVLDDARKVFDEIPE-RNVVAWNALMVGYVQNGMNEEAIRL 241

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F +M+    +    T+   L A A +    EGKQ H   + + LE +  +   L++ Y +
Sbjct: 242 FSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCK 301

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              +E A  VFD M                           F+K        D++TWN L
Sbjct: 302 VGLIEYAEMVFDRM---------------------------FDK--------DVVTWNLL 326

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           +SG+   G  ++ + + + M+    + +  ++S ++ A      LK+G+E   Y +R+ L
Sbjct: 327 ISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSL 386

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           D D+ + ++ MDMY K   + +A++VFD+   ++++ WN+L++ Y   GL   A ++  +
Sbjct: 387 DTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYE 446

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M+ E + P++++WN ++      G+  EA  +   M++SGI PN+++WT++++G +QN  
Sbjct: 447 MQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGC 506

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVAT 742
             E++ F  +MQ+  ++PN+ +++  L     L  L  G+ IH   ++N        + T
Sbjct: 507 SEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIET 566

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+DMY+K G++  A  VF       L  +N MI  +A+YGN KEAI L+  L + G +P
Sbjct: 567 SLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKP 626

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D++TFT+LL+AC ++G +++    F +M   + + P +EHY  MVDLL  AG  ++A   
Sbjct: 627 DSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRL 686

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
           I  MP+KPDA +  +L+ SC      E  E  SR L + EP NS NY  + N  A+   W
Sbjct: 687 IEEMPYKPDARMIQSLVASCNKQHKTELVEYLSRHLLESEPENSGNYVTISNAYAVEGSW 746

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQI---DQIVHVFSAEGAPH 962
           ++V ++R  M   G+K     SWIQI   ++ VHVF A    H
Sbjct: 747 DEVVKMREMMKAKGLKKKPGCSWIQIKGEEEGVHVFVANDXTH 789



 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 179/735 (24%), Positives = 317/735 (43%), Gaps = 148/735 (20%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF---DV 329
           GE++E L +  E+  +       I    L+ C        G ++HA ++K G DF   + 
Sbjct: 29  GEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARILKNG-DFYARNE 87

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           +++  L+ FY KC  +E A  +FS++  + +   W  II VK R    E A+  F EM  
Sbjct: 88  YIETKLVIFYAKCDALEXAEVIFSKLR-VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 146

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           +     +  +  + +AC  +     G+ +HGYV+K+ LE  + V + L  MY +   L+ 
Sbjct: 147 NEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDD 206

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VFD + + N+ +WN+++  Y   G  + A  LF+ M    ++P  +T          
Sbjct: 207 ARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVT---------- 256

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                    VS  L A   +  ++ G++SH   + NGL+ D  +
Sbjct: 257 -------------------------VSTCLSASANMVGVEEGKQSHAIAIVNGLELDNIL 291

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GTSL++ Y K   ++ A+ VFD M ++++V WN LISGY  +GL  +A  M   M  E++
Sbjct: 292 GTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKL 351

Query: 630 KPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMK------------------------ 660
           K D V+ ++L+S  +      +G+  +   I H +                         
Sbjct: 352 KYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKK 411

Query: 661 --NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
             +S +  +++ W +L++   Q+    E+L+ F +MQ E + PN  T + ++     L L
Sbjct: 412 VFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLII-----LSL 466

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK----SANKTLASWNC 774
           L+NG+                              +  A+E+F +      +  L SW  
Sbjct: 467 LRNGE------------------------------VNEAKEMFLQMQSSGISPNLISWTT 496

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN----------SGLVEEGW 824
           M+ G    G  +EAIL   ++ E+G +P+A + T  L+A  N           G +    
Sbjct: 497 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNL 556

Query: 825 KYFDSMSTDYNII---------------------PTIEHYSCMVDLLGKAGYLDEAWDFI 863
           ++  S+S + +++                       +  Y+ M+      G + EA    
Sbjct: 557 RHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALY 616

Query: 864 RT---MPFKPDATIWGALLGSCRIHGHLEYA-EIASRRLFK--LEPCNSANYNLMMNLLA 917
           R+   M  KPD+  + +LL +C   G ++ A  + +  + K  + PC   +Y LM++LLA
Sbjct: 617 RSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMTPC-LEHYGLMVDLLA 675

Query: 918 MSNRWEDVERLRHSM 932
            +   E   RL   M
Sbjct: 676 SAGETEKAIRLIEEM 690



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 178/709 (25%), Positives = 312/709 (44%), Gaps = 126/709 (17%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESN 430
           +N + + A+ L  EM F + +       + LQ C        GKQIH  +LK+      N
Sbjct: 27  KNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARILKNGDFYARN 86

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
             +   L+  Y++ + LE A  +F  ++  N+ SW ++I     +G  + A   F +M  
Sbjct: 87  EYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 146

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
           + I PD                  N +            PN      V +A   L+  ++
Sbjct: 147 NEIFPD------------------NFVV-----------PN------VCKACGALQWSRF 171

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           GR  HGY+++ GL+  ++V +SL DMY K   L +A++VFD +  RN+VAWN+L+ GY  
Sbjct: 172 GRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQ 231

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMKNSGIY 665
            G+   A ++ + M +E ++P  V+ ++ +S  +       G+   A+ I++ ++   I 
Sbjct: 232 NGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNIL 291

Query: 666 --------------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
                                      +VVTW  LISG +Q     +++     M+ E +
Sbjct: 292 GTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKL 351

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           K +  T+S+L+        L+ GKE+ C C+++    D  +A+  +DMY+K G++  A++
Sbjct: 352 KYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKK 411

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VF  +  K L  WN ++  +A  G   EA+ LF+E+      P+ IT+  ++ +   +G 
Sbjct: 412 VFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGE 471

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDA-TIW 875
           V E  + F  M +   I P +  ++ M++ + + G  +EA  F+R M     +P+A +I 
Sbjct: 472 VNEAKEMFLQMQSS-GISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 530

Query: 876 GALLGSCR---------IHG-------HLEYAEIASRRLFKLEPCNSAN----------- 908
            AL  S           IHG       H     I +  +     C   N           
Sbjct: 531 VALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLY 590

Query: 909 -----YNLMMNLLAMSNRWEDVERLRHSMDEVGVK--SVLVWSWI-------QIDQIVHV 954
                YN M++  A+    ++   L  S++++G+K  SV   S +        IDQ V V
Sbjct: 591 SELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGV 650

Query: 955 FSAEGAPHPATG--EIYFELYHLVSE----------MKKLGYVPDTRCV 991
           F+A    H  T   E Y  +  L++           ++++ Y PD R +
Sbjct: 651 FTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMI 699



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 12/228 (5%)

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
           H  +  + P+  ++   +S   +N   +E+L    +M   + +         LQ C    
Sbjct: 5   HHDDQALPPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYER 64

Query: 718 LLQNGKEIHCLCLKNG--FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            L  GK+IH   LKNG  + ++ Y+ T L+  Y+K   L+ A  +F K   + + SW  +
Sbjct: 65  DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAI 124

Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
           I      G  + A++ F E+LE    PD      +   CK  G ++  W  F      Y 
Sbjct: 125 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNV---CKACGALQ--WSRFGRGVHGYV 179

Query: 836 IIPTIEH----YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           I   +E      S + D+ GK G LD+A      +P + +   W AL+
Sbjct: 180 IKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPER-NVVAWNALM 226


>gi|357147690|ref|XP_003574443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Brachypodium distachyon]
          Length = 859

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/780 (29%), Positives = 388/780 (49%), Gaps = 47/780 (6%)

Query: 335  LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
            L+ F+     ++ A K+F  +S  +D L W+ +I        ++  + L  +M       
Sbjct: 88   LIAFHSSAGRLDDARKVFDGMSH-KDLLAWSSMIGAYATRGMFDEVLVLAVKMVSEGVLP 146

Query: 395  ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL---ESNLSVCNCLISMYSRNNKLELAT 451
                I ++LQACA       G  +H   ++      E ++ V N ++ MY +  +L  A 
Sbjct: 147  DRFLITRILQACAYAEDLELGTVLHSMAIRRGFMGREKDVPVSNSVLVMYVKCGELGFAR 206

Query: 452  RVFDSMKDHNLSSWNSMI-----------------------------------SSYTGLG 476
             VF+ M   +L +WNSMI                                   SSY   G
Sbjct: 207  VVFEKMGRRDLGTWNSMIFGCCRSCKWEEARRLLDDMRKEGIEPGVVTWNTLISSYARSG 266

Query: 477  YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
             ++VA  L  +M  S ++PD++TW  L+SG          L     M+  G  PNG +++
Sbjct: 267  DLNVAVELLEQMEESGVEPDVVTWTSLVSGFVHSDRGVEALQCFIRMRLAGVEPNGMTIA 326

Query: 537  VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
              + A   L+LL  G   H + ++ G   ++  G SL+DMY K      A  +F+ +  +
Sbjct: 327  CAISACASLKLLNQGSMLHCHAIKVGSVKNVLSGNSLVDMYAKCGETVAASRIFNQIPEK 386

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
            +I +WNS+++GY   G    A ++  +ME   I+ + ++WN+++SGY   G  + A  + 
Sbjct: 387  DIFSWNSMVAGYAQAGYCGKAYELFCKMENYGIRRNAITWNTMISGYIRNGDDERAFELF 446

Query: 657  HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
              M++ G+  +  +W  LI+GS+ N  +  +L+ F QMQ   IKP+  T+ S++     L
Sbjct: 447  QTMESYGVKRDTASWNILIAGSVHNGYFDRALRIFRQMQAVLIKPDYITVLSIIPAFANL 506

Query: 717  GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
                  +EIH     +    D  +A  LI+ YSKSG+L  A  VF + +++ + SWNC+I
Sbjct: 507  VAAWKVREIHACIFHHNLEIDGKIANALINAYSKSGDLAGACAVFDRHSSRNIISWNCII 566

Query: 777  MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
            +   ++G+  E +  F+++ + G  PD  T TA++ A     +V EG + F +M  +YN+
Sbjct: 567  VAHLLHGSPTEVLNHFYKMKQQGVLPDHTTLTAVIKAYGMEAMVSEGREIFLNMEKNYNV 626

Query: 837  IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
             P ++HY+ MVDLLG++G L EA++ I  MP  P+ T+W ALL S  +HG++  A +A+ 
Sbjct: 627  TPDLDHYTAMVDLLGRSGRLQEAYELIDEMPLTPNLTVWEALLTSAIMHGNVRLAHLAAT 686

Query: 897  RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
             +  +EP +     ++  L  ++ +  DV +L        +  +   S  +I  IV++FS
Sbjct: 687  EMSDIEPSDLRIQMVVSGLQDLAGKSFDVPKLTVHNKGRMLDGIECCS-TEIKNIVYLFS 745

Query: 957  AEGAPHPATGEIYFELYHLVSEMKKLGY-VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
                 + A+  I  EL  +   M ++G  + D      D+ EEEK +V   H EKLAI  
Sbjct: 746  T--GDNVASEHIVAELELI---MMQIGLSMLDISSGTLDV-EEEKEEVAGIHCEKLAIAL 799

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            G+  +     IR+IK TR+C+ CHT AK +S   GR+I ++D    H F  G+CSC D W
Sbjct: 800  GISNSPQFRSIRIIKTTRMCNHCHTFAKLVSEKYGRQILIKDPKCLHKFENGKCSCEDYW 859



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 260/531 (48%), Gaps = 28/531 (5%)

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           S   +I+ ++  G +D A  +F+ M+      D++ W+ ++  + T G +  VL L   M
Sbjct: 84  SETKLIAFHSSAGRLDDARKVFDGMS----HKDLLAWSSMIGAYATRGMFDEVLVLAVKM 139

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL---DYDLYVGTSLMDMYVKN 580
            S G  P+   ++ +LQA      L+ G   H   +R G    + D+ V  S++ MYVK 
Sbjct: 140 VSEGVLPDRFLITRILQACAYAEDLELGTVLHSMAIRRGFMGREKDVPVSNSVLVMYVKC 199

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             L  A+ VF+ M  R++  WNS+I G C    +  A+++L+ M +E I+P +V+WN+L+
Sbjct: 200 GELGFARVVFEKMGRRDLGTWNSMIFGCCRSCKWEEARRLLDDMRKEGIEPGVVTWNTLI 259

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
           S Y+  G    A+ ++  M+ SG+ P+VVTWTSL+SG + ++   E+L+ FI+M+   ++
Sbjct: 260 SSYARSGDLNVAVELLEQMEESGVEPDVVTWTSLVSGFVHSDRGVEALQCFIRMRLAGVE 319

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           PN  T++  +  C  L LL  G  +HC  +K G +K+      L+DMY+K G   +A  +
Sbjct: 320 PNGMTIACAISACASLKLLNQGSMLHCHAIKVGSVKNVLSGNSLVDMYAKCGETVAASRI 379

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
           F +   K + SWN M+ G+A  G   +A  LF ++   G + +AIT+  +++    +G  
Sbjct: 380 FNQIPEKDIFSWNSMVAGYAQAGYCGKAYELFCKMENYGIRRNAITWNTMISGYIRNGDD 439

Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPD-ATIWG 876
           E  ++ F +M + Y +      ++ ++      GY D A    R M     KPD  T+  
Sbjct: 440 ERAFELFQTMES-YGVKRDTASWNILIAGSVHNGYFDRALRIFRQMQAVLIKPDYITVLS 498

Query: 877 ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            +     +    +  EI +         +    N ++N  + S    D+       D   
Sbjct: 499 IIPAFANLVAAWKVREIHACIFHHNLEIDGKIANALINAYSKSG---DLAGACAVFDRHS 555

Query: 937 VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
            ++++ W+ I +  ++H     G+P       Y        +MK+ G +PD
Sbjct: 556 SRNIISWNCIIVAHLLH-----GSPTEVLNHFY--------KMKQQGVLPD 593



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 143/686 (20%), Positives = 274/686 (39%), Gaps = 127/686 (18%)

Query: 137 IVMPKLHSIY--HHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSG 194
           +V+P   S+    H +    +++ RH      I     +   PP     ++A+   +   
Sbjct: 3   LVLPPFSSLLPKSHHHPPQPLSRARHGRLQEPIMALAQA---PPLPLSLQEARSVHVPHR 59

Query: 195 FCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYF 254
              + E  +    SS+ S+  + +   K          LI  +   G    A K F    
Sbjct: 60  ARPVEEPARAHPSSSIASEEPRFVSETK----------LIAFHSSAGRLDDARKVFDGMS 109

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
            +    WSS +  Y +  G   E+L +  ++  +GV+    ++T IL+ C       LG 
Sbjct: 110 HKDLLAWSSMIGAYAT-RGMFDEVLVLAVKMVSEGVLPDRFLITRILQACAYAEDLELGT 168

Query: 315 EVHASLIKR---GFDFDV---------HLKCALMNF--------------------YGKC 342
            +H+  I+R   G + DV         ++KC  + F                    +G C
Sbjct: 169 VLHSMAIRRGFMGREKDVPVSNSVLVMYVKCGELGFARVVFEKMGRRDLGTWNSMIFGCC 228

Query: 343 RDV--ESANKLFS-------------------------------------EVSDLEDDLL 363
           R    E A +L                                       E S +E D++
Sbjct: 229 RSCKWEEARRLLDDMRKEGIEPGVVTWNTLISSYARSGDLNVAVELLEQMEESGVEPDVV 288

Query: 364 -WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV 422
            W  ++   + +++   A++ F  M+ +  +    TI   + ACA +   ++G  +H + 
Sbjct: 289 TWTSLVSGFVHSDRGVEALQCFIRMRLAGVEPNGMTIACAISACASLKLLNQGSMLHCHA 348

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAW 482
           +K     N+   N L+ MY++  +   A+R+F+ + + ++ SWNSM++ Y   GY   A+
Sbjct: 349 IKVGSVKNVLSGNSLVDMYAKCGETVAASRIFNQIPEKDIFSWNSMVAGYAQAGYCGKAY 408

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGS------------------------------ 512
            LF KM +  I+ + ITWN ++SG+  +G                               
Sbjct: 409 ELFCKMENYGIRRNAITWNTMISGYIRNGDDERAFELFQTMESYGVKRDTASWNILIAGS 468

Query: 513 -----YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                +   L + R MQ++  +P+  +V  ++ A   L      RE H  I  + L+ D 
Sbjct: 469 VHNGYFDRALRIFRQMQAVLIKPDYITVLSIIPAFANLVAAWKVREIHACIFHHNLEIDG 528

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +  +L++ Y K+  L  A  VFD   +RNI++WN +I  +   G          +M+++
Sbjct: 529 KIANALINAYSKSGDLAGACAVFDRHSSRNIISWNCIIVAHLLHGSPTEVLNHFYKMKQQ 588

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRE 686
            + PD  +  +++  Y +     E   I  +M KN  + P++  +T+++    ++   +E
Sbjct: 589 GVLPDHTTLTAVIKAYGMEAMVSEGREIFLNMEKNYNVTPDLDHYTAMVDLLGRSGRLQE 648

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQT 712
           + +   +M    + PN T   +LL +
Sbjct: 649 AYELIDEMP---LTPNLTVWEALLTS 671



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 122/283 (43%), Gaps = 14/283 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFS----RSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           ++I  Y+  GD   A + F    S    R  A W+  +       G     L ++ ++  
Sbjct: 428 TMISGYIRNGDDERAFELFQTMESYGVKRDTASWNILIAG-SVHNGYFDRALRIFRQM-- 484

Query: 288 KGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
           + V+ +   +T+  I+     L+A W   E+HA +     + D  +  AL+N Y K  D+
Sbjct: 485 QAVLIKPDYITVLSIIPAFANLVAAWKVREIHACIFHHNLEIDGKIANALINAYSKSGDL 544

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
             A  +F   S   + + WN II+  L +      +  F +M+         T+  +++A
Sbjct: 545 AGACAVFDRHSS-RNIISWNCIIVAHLLHGSPTEVLNHFYKMKQQGVLPDHTTLTAVIKA 603

Query: 406 CAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLS 463
                   EG++I   + K+  +  +L     ++ +  R+ +L+ A  + D M    NL+
Sbjct: 604 YGMEAMVSEGREIFLNMEKNYNVTPDLDHYTAMVDLLGRSGRLQEAYELIDEMPLTPNLT 663

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            W ++++S    G V +A     +M  S I+P  +    ++SG
Sbjct: 664 VWEALLTSAIMHGNVRLAHLAATEM--SDIEPSDLRIQMVVSG 704


>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
            [Vitis vinifera]
 gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/446 (41%), Positives = 276/446 (61%), Gaps = 5/446 (1%)

Query: 631  PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
            PD V  N+L+  YS  G   EAL +   M     + NVV+W SLI+G ++ +   E+++ 
Sbjct: 211  PDQVVNNALLRLYSEDGCFDEALRVFDGMP----HRNVVSWNSLIAGLVKKDGVFEAIEA 266

Query: 691  FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            F  MQ + +  +  T++++L  C  +  L +GKEIH + +K+    DA V   L+DMY+K
Sbjct: 267  FRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAK 326

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             G +   R VF     K L SWN +I G+AI G   EA+  F E++ +GF PD ITF AL
Sbjct: 327  CGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIAL 386

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L+ C ++GL ++G + F+ M  DY I PT+EHY+C+VD+LG+AG + EA + ++ MPFKP
Sbjct: 387  LSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKP 446

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
              +IWG+LL SCR+HG++  AE  ++RLF+LEP N+ NY ++ N+ A +  WE V+ +R 
Sbjct: 447  TGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVRE 506

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELY-HLVSEMKKLGYVPDTR 989
             M++ G+      SW+QI   +H F A G+        Y +++  L+  M+++GYVPDT 
Sbjct: 507  FMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTG 566

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
             V  D+ EE +   +  H+E+LA ++ L+ T S  PIR+ KN RVC DCH+  K +S V 
Sbjct: 567  VVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVT 626

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
            GR I LRD  RFHHF++G CSC D W
Sbjct: 627  GRVIVLRDTNRFHHFKDGVCSCKDYW 652



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 168/386 (43%), Gaps = 41/386 (10%)

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLED--DLLWNEIIMVKLRNEKWENAIKLFREMQ 388
           LK  L+  +  CR V+ A ++F +  +  D  + +W  + +   RN   + A+ L+ EM 
Sbjct: 111 LKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMV 170

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
               +  +      L+AC+ +G    G+ +H  VLK+  + +  V N L+ +YS +   +
Sbjct: 171 CQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFD 230

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
            A RVFD M   N                                   +++WN L++G  
Sbjct: 231 EALRVFDGMPHRN-----------------------------------VVSWNSLIAGLV 255

Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
                   +   R MQ  G   +  +++ +L     +  L  G+E H  I+++    D  
Sbjct: 256 KKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAP 315

Query: 569 VGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
           V  SL+DMY K   +   + VF+ M+ +++ +WN+LI+GY   G    A +   +M    
Sbjct: 316 VLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSG 375

Query: 629 IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRES 687
             PD +++ +L+SG S  G + +   +   MK + GI P V  +  L+    +    +E+
Sbjct: 376 FSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEA 435

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTC 713
           L+    M     KP  +   SLL +C
Sbjct: 436 LEIVKNMP---FKPTGSIWGSLLNSC 458



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 1/210 (0%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
            ++ LK C+ L     G  VHA ++K   D D  +  AL+  Y +    + A ++F  + 
Sbjct: 181 FSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMP 240

Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
              + + WN +I   ++ +    AI+ FR MQ         T+  +L  CA+V A   GK
Sbjct: 241 H-RNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGK 299

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           +IH  ++KS  + +  V N L+ MY++   ++   RVF+ M+  +L+SWN++I+ Y   G
Sbjct: 300 EIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAING 359

Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            +  A   F +M  S   PD IT+  LLSG
Sbjct: 360 RMTEAMESFQEMICSGFSPDGITFIALLSG 389



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 163/392 (41%), Gaps = 45/392 (11%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +I+ ++    VD A  +F         P+ + W  +  G+  +G  +  L L   M    
Sbjct: 115 LITLFSVCRRVDEARRVFEDGGEDVDLPESV-WVAMGIGYSRNGYPKEALLLYYEMVCQF 173

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
            +    + S+ L+A ++L  L+ GR  H  +L+   D D  V  +L+ +Y ++ C   A 
Sbjct: 174 GQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEAL 233

Query: 588 EVFDNMKNRNIVAWNSLISGYCFK-GLFV------------------------------- 615
            VFD M +RN+V+WNSLI+G   K G+F                                
Sbjct: 234 RVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVT 293

Query: 616 ---NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
              + K++   + +   KPD    NSLV  Y+  G       + + M+      ++ +W 
Sbjct: 294 ALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGK----DLTSWN 349

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLK 731
           +LI+G   N    E+++ F +M      P+  T  +LL  C   GL  +G +    + + 
Sbjct: 350 TLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMD 409

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAIL 790
            G          L+D+  ++G +K A E+ +    K   S W  ++    ++GN   A  
Sbjct: 410 YGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEA 469

Query: 791 LFHELLETGFQP-DAITFTALLAACKNSGLVE 821
           +   L E   +P +A  +  L     N+G+ E
Sbjct: 470 VAKRLFE--LEPNNAGNYVMLSNIYANAGMWE 499



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 134/285 (47%), Gaps = 7/285 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           L + ++ HAQ++K  +  + D +V  +L+  Y E G F  A + F     R+   W+S +
Sbjct: 194 LQTGRAVHAQVLKATE--DPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLI 251

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
                  G V E +E +  + GKG+ F    LT IL +C ++ A   G E+HA ++K   
Sbjct: 252 AGLVKKDG-VFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTA 310

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
             D  +  +L++ Y KC  ++   ++F+ +   +D   WN +I     N +   A++ F+
Sbjct: 311 KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQG-KDLTSWNTLITGYAINGRMTEAMESFQ 369

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV-LKSALESNLSVCNCLISMYSRN 444
           EM  S       T + +L  C+  G   +G ++   + +   +   +    CL+ +  R 
Sbjct: 370 EMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRA 429

Query: 445 NKLELATRVFDSMKDHNLSS-WNSMISSYTGLGYVDVAWSLFNKM 488
            +++ A  +  +M      S W S+++S    G V +A ++  ++
Sbjct: 430 GRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRL 474



 Score = 40.0 bits (92), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 5/140 (3%)

Query: 744 LIDMYSKSGNLKSAREVFRKSANKT---LASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
           LI ++S    +  AR VF           + W  M +G++  G  KEA+LL++E++    
Sbjct: 115 LITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFG 174

Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
           Q     F+  L AC + G ++ G +   +        P     + ++ L  + G  DEA 
Sbjct: 175 QLGNFAFSMALKACSDLGDLQTG-RAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEAL 233

Query: 861 DFIRTMPFKPDATIWGALLG 880
                MP + +   W +L+ 
Sbjct: 234 RVFDGMPHR-NVVSWNSLIA 252


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Cucumis sativus]
          Length = 759

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/689 (32%), Positives = 357/689 (51%), Gaps = 71/689 (10%)

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
            G   H YVLK     +  + N ++ MY++N +++LA  +F+ M +  L+ WNSMIS    
Sbjct: 114  GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173

Query: 475  LGYVDVAWSLFNKMNSSRI---------------------------QPDIITWNCLLSGH 507
             G    A  LFN M +  I                           +  +++WN + S +
Sbjct: 174  SGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAY 233

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                  +  L L   M   G  P+ ++  V + + + +            I +  +  + 
Sbjct: 234  AQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNS 293

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            +V T+L+DM+ K   L+ A+ +FD + ++                               
Sbjct: 294  FVKTALLDMHAKFGNLEIARNIFDELGSQR------------------------------ 323

Query: 628  EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
                + V+WN ++S Y+  G+   A  +  +M       +VV+W S+I+G  QN     S
Sbjct: 324  ----NAVTWNIMISAYTRVGKLSLARELFDNMPKR----DVVSWNSMIAGYAQNGESAMS 375

Query: 688  LKFFIQMQQ-EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
            ++ F +M    DI+P+  T++S+L  CG +G L+    +  +  +            LI 
Sbjct: 376  IELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIF 435

Query: 747  MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
            MYSK G++  A  +F+    + + S+N +I GFA  G+GKEAI L   + E G +PD +T
Sbjct: 436  MYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495

Query: 807  FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
            +  +L AC ++GL+ EG   F S+       PT++HY+CMVDLLG+AG LDEA   I++M
Sbjct: 496  YIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSM 550

Query: 867  PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
            P KP A ++G+LL + RIH  +   E+A+ +LF+LEP N  NY L+ N+ A   RWEDV+
Sbjct: 551  PMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVK 610

Query: 927  RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVP 986
            R+R  M + G+K  +  SW++    VH F+     H  + +IY  L  L  +MK++G+V 
Sbjct: 611  RVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVA 670

Query: 987  DTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMS 1046
            D  C  +D++EEEK ++L +H+EKLAI + L+ ++    IRV+KN R+C DCHTA K +S
Sbjct: 671  DKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMIS 730

Query: 1047 LVRGREIFLRDGARFHHFREGECSCNDCW 1075
             + GREI +RD  RFH F EG CSC+D W
Sbjct: 731  KLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 214/477 (44%), Gaps = 70/477 (14%)

Query: 453 VFDSMKDHNLSSWNSMI-----SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
           V +S+  HN   W S++       +    YVD   S+F    +S   PD   ++C+L  +
Sbjct: 25  VHNSLHSHNY--WVSLLLINCTRLHAHPAYVD---SIF----TSSPSPDASVYSCMLKYY 75

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES----HGYILRNGL 563
              G++  V++L +   SL  RP         Q    + L+K   +S    H Y+L+ G 
Sbjct: 76  SRMGAHNQVVSLFKCTHSLNLRP---------QPFVYIYLIKLAGKSGNLFHAYVLKLGH 126

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D ++  +++DMY KN  +  A+ +F+ M  R +  WNS+ISG    G    A  + N 
Sbjct: 127 IDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNM 186

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M    I    ++W S+V+GY+  G  + A      M       +VV+W ++ S   Q E 
Sbjct: 187 MPARNI----ITWTSMVTGYAKMGDLESARRYFDEMPER----SVVSWNAMQSAYAQKEC 238

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
            +E+L  F QM +E I P+ TT    + +C  +G       I  +  +   + +++V T 
Sbjct: 239 PKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTA 298

Query: 744 LIDMYSKSGNLKS--------------------------------AREVFRKSANKTLAS 771
           L+DM++K GNL+                                 ARE+F     + + S
Sbjct: 299 LLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVS 358

Query: 772 WNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
           WN MI G+A  G    +I LF E++     QPD +T  ++L+AC + G ++  +   D +
Sbjct: 359 WNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLD-I 417

Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
             + NI   I  ++ ++ +  K G + +A    +TM  + D   +  L+     +GH
Sbjct: 418 VREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGH 473



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 205/495 (41%), Gaps = 97/495 (19%)

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRN 374
           HA ++K G   D  ++ A+++ Y K   V+ A  LF ++++  L D   WN +I      
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLAD---WNSMI------ 168

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES-NLSV 433
                                              G +  G +    VL + + + N+  
Sbjct: 169 ----------------------------------SGCWKSGNETEAVVLFNMMPARNIIT 194

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
              +++ Y++   LE A R FD M + ++ SWN+M S+Y        A +LF++M    I
Sbjct: 195 WTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            PD  TW   +S   + G      ++LR +       N    + +L    +   L+  R 
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314

Query: 554 SHGYI--LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
               +   RN + +++ +       Y +   L  A+E+FDNM  R++V+WNS+I+GY   
Sbjct: 315 IFDELGSQRNAVTWNIMISA-----YTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369

Query: 612 G-------LF-------------------------VNAKKM----LNQMEEEEIKPDLVS 635
           G       LF                         + A K+    L+ + E+ IK  +  
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISG 429

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
           +NSL+  YS  G   +A  I   M       +VV++ +LISG   N + +E++K  + M+
Sbjct: 430 FNSLIFMYSKCGSVADAHRIFQTMGTR----DVVSFNTLISGFAANGHGKEAIKLVLTME 485

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           +E I+P+  T   +L  C   GLL  GK +           D Y    ++D+  ++G L 
Sbjct: 486 EEGIEPDHVTYIGVLTACSHAGLLNEGKNV--FKSIQAPTVDHYAC--MVDLLGRAGELD 541

Query: 756 SAREVFRKSANKTLA 770
            A+ + +    K  A
Sbjct: 542 EAKMLIQSMPMKPHA 556



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 20/283 (7%)

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P+   ++ ++    +   + + +  F      +++P       L++  G     ++G   
Sbjct: 63  PDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNLF 117

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
           H   LK G I D ++   ++DMY+K+G +  AR +F + A +TLA WN MI G    GN 
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177

Query: 786 KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            EA++LF+ +       + IT+T+++      G +E   +YFD M        ++  ++ 
Sbjct: 178 TEAVVLFNMMPAR----NIITWTSMVTGYAKMGDLESARRYFDEMPER-----SVVSWNA 228

Query: 846 MVDLLGKAGYLDEAWDFIRTM---PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
           M     +     EA +    M      PD T W   + SC   G    A+   R + +  
Sbjct: 229 MQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH 288

Query: 903 PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV-KSVLVWS 944
                N  +   LL M  ++ ++E  R+  DE+G  ++ + W+
Sbjct: 289 IV--LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWN 329



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 130/307 (42%), Gaps = 33/307 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           S++  Y + GD  SA + F     RS   W++    Y       +E L ++ ++  +G+ 
Sbjct: 197 SMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECP-KEALNLFHQMLEEGIT 255

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                  + +  C+ +    L   +   + ++    +  +K AL++ + K  ++E A  +
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315

Query: 352 FSEVSDLEDDLLWNEII-------MVKLRNEKWEN------------------------A 380
           F E+    + + WN +I        + L  E ++N                        +
Sbjct: 316 FDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMS 375

Query: 381 IKLFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           I+LF+EM      +    TI  +L AC  +GA      +   V +  ++  +S  N LI 
Sbjct: 376 IELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIF 435

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MYS+   +  A R+F +M   ++ S+N++IS +   G+   A  L   M    I+PD +T
Sbjct: 436 MYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495

Query: 500 WNCLLSG 506
           +  +L+ 
Sbjct: 496 YIGVLTA 502



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 7/226 (3%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y   G  + A + F     R    W+S +  Y    GE    +E++ E+     I 
Sbjct: 331 MISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQ-NGESAMSIELFKEMISCMDIQ 389

Query: 293 RSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
              + +  +L  C  + A  L   V   + ++     +    +L+  Y KC  V  A+++
Sbjct: 390 PDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRI 449

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F  +    D + +N +I     N   + AIKL   M+    +    T + +L AC+  G 
Sbjct: 450 FQTMGT-RDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGL 508

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            +EGK     V KS     +    C++ +  R  +L+ A  +  SM
Sbjct: 509 LNEGKN----VFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSM 550


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/585 (36%), Positives = 316/585 (54%), Gaps = 45/585 (7%)

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN----- 585
            N +  S +L  + +   LK  ++   + ++  L  DL + T L+     N C QN     
Sbjct: 22   NTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLI-----NSCTQNPTTAS 76

Query: 586  ---AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
               A ++F+ +   +IV +NS+  GY      + A  +  +     + PD  ++ SL+  
Sbjct: 77   MDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKA 136

Query: 643  YSI-----WGQSKEALVI--------------------------IHHMKNSGIYPNVVTW 671
              +      G+    L I                             + +  + P VV++
Sbjct: 137  CVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSY 196

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             ++I+G  ++    E+L  F Q+Q   +KPN  T+ S+L +C  LG L  GK IH    K
Sbjct: 197  NAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKK 256

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            NG  K   V T LIDMY+K G+L  A  VF   + +   +W+ MI+ +A++G G++ + +
Sbjct: 257  NGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSM 316

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F E+     QPD ITF  LL AC ++GLV+EG++YF SMS  Y IIP I+HY CMVDLLG
Sbjct: 317  FEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLG 376

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L EA+ FI  +P KP   +W  LL SC  HG+LE A+    ++ +L+  +  +Y +
Sbjct: 377  RAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVI 436

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + NL A + +WEDV+ LR  M   G   +   S I++D +VH F +    H  +  ++  
Sbjct: 437  LSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRA 496

Query: 972  LYHLVSEMKKLGYVPDTR-CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            L  LV E+K +GYVPDT   V+ D+++EEK   L  H+EKLAI +GL+ T     IRV+K
Sbjct: 497  LDELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVK 556

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            N RVC DCH+AAK +S +  REI LRD  RFHHF++G+CSC D W
Sbjct: 557  NLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 193/438 (44%), Gaps = 47/438 (10%)

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK---CRDVESA 348
           + S +L+ + K CT L       ++ A  IK     D+ +   L+N   +      ++ A
Sbjct: 25  YPSSLLSCLPK-CTSLKELK---QIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYA 80

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
           ++LF  +    D +L+N +     R+     AI LF +    +      T   +L+AC  
Sbjct: 81  HQLFEAIPQ-PDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVV 139

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
             AF +GKQ+H   +K  L  N  VC  LI+MY+                          
Sbjct: 140 AKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYA-------------------------- 173

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
                G   VD A  +F+++    ++P ++++N +++G+         L+L R +Q+   
Sbjct: 174 -----GCNDVDGAQRVFDEI----LEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKL 224

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           +PN  +V  VL +   L  L  G+  H Y+ +NGLD  + V T+L+DMY K   L  A  
Sbjct: 225 KPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAIS 284

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           VF++M  R+  AW+++I  Y   G   +   M  +M   +++PD +++  L+   S  G 
Sbjct: 285 VFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGL 344

Query: 649 SKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             E     + M    GI P +  +  ++    +     E+ KF  ++    IKP      
Sbjct: 345 VDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELP---IKPTPILWR 401

Query: 708 SLLQTCGGLGLLQNGKEI 725
           +LL +C   G L+  K++
Sbjct: 402 TLLSSCSSHGNLELAKQV 419



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/429 (20%), Positives = 179/429 (41%), Gaps = 65/429 (15%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +L    K  +  E KQI  + +K+ L+++L +   LI                      N
Sbjct: 29  LLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLI----------------------N 66

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
             + N   +S      +D A  LF  +     QPDI+ +N +  G+    +    ++L  
Sbjct: 67  SCTQNPTTAS------MDYAHQLFEAIP----QPDIVLFNSMFRGYSRSNAPLKAISLFI 116

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
              +    P+  +   +L+A    +  + G++ H   ++ GL+ + YV  +L++MY   +
Sbjct: 117 KALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCN 176

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            +  AQ VFD +    +V++N++I+GY        A  +  Q++  ++KP+ V+  S++S
Sbjct: 177 DVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLS 236

Query: 642 GYSIWGQSKEALVIIHHMKNSGI--YPNVVT----------------------------- 670
             ++ G       I  ++K +G+  Y  V T                             
Sbjct: 237 SCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQA 296

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLC 729
           W+++I     +   ++ +  F +M +  ++P+  T   LL  C   GL+  G +  + + 
Sbjct: 297 WSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMS 356

Query: 730 LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEA 788
              G I        ++D+  ++G L  A +   +   K T   W  ++   + +GN + A
Sbjct: 357 EVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELA 416

Query: 789 ILLFHELLE 797
             + +++LE
Sbjct: 417 KQVMNQILE 425



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 121/287 (42%), Gaps = 19/287 (6%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H   IK+G   N +  V  +LI  Y    D   A + F          +++ +  Y 
Sbjct: 147 KQLHCLAIKLG--LNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGY- 203

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           +      E L ++ +L  + +      +  +L  C  L A  LG  +H  + K G D  V
Sbjct: 204 ARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYV 263

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  AL++ Y KC  ++ A  +F  +S + D   W+ +I+    + + ++ + +F EM  
Sbjct: 264 KVNTALIDMYAKCGSLDGAISVFESMS-VRDTQAWSAMIVAYAMHGQGQDVMSMFEEMAR 322

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEG-------KQIHGYVLKSALESNLSVCNCLISMYS 442
           +  +    T + +L AC+  G   EG        +++G +        +    C++ +  
Sbjct: 323 AKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGII------PGIKHYGCMVDLLG 376

Query: 443 RNNKLELATRVFDSMKDHNLSS-WNSMISSYTGLGYVDVAWSLFNKM 488
           R   L  A +  D +        W +++SS +  G +++A  + N++
Sbjct: 377 RAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQI 423


>gi|125575136|gb|EAZ16420.1| hypothetical protein OsJ_31889 [Oryza sativa Japonica Group]
          Length = 664

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/684 (32%), Positives = 353/684 (51%), Gaps = 36/684 (5%)

Query: 398  TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            T+  +L AC  + A   GKQ+H YV++  ++ N+ + + LI MYS   +   A  VF ++
Sbjct: 11   TVASILPACTGLMALGIGKQLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAI 70

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
            ++ N + WN +I SY     ++ AW  F  M  + +QPD IT+N  ++ +   G  +   
Sbjct: 71   EEKNATVWNELIRSYINEERMNEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAY 130

Query: 518  TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
            TLL  M  +G +PN  S++ ++       L  +GR +      + L+   Y       M 
Sbjct: 131  TLLSNMVEIGLKPNVVSMNALISG-----LHHHGRHA------DALEAFRY-------MQ 172

Query: 578  VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            V +D       +  N    N     S++S      L    K++        +  ++   +
Sbjct: 173  VSSDGEAKGWALPGNSIQPNGTTITSVLSLLTDLRLDRLGKEVHCYAFRSGLISNIFVSS 232

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
             LV  Y   G    A  +   + N     NVVTW S+++   QN     +LK F +M + 
Sbjct: 233  KLVDLYGKTGDVGTADKVFRRISNK----NVVTWNSILASYRQNRKPEIALKLFHEMIKS 288

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY---VATGLIDMYSKSGNL 754
            ++ PN  T+   L + G    LQ+G+E+H    KN    D Y   +A+ LIDMY K G +
Sbjct: 289  NLLPNLVTLQIALLSSGMTMALQHGRELHGYIRKN--WPDGYPTALASALIDMYGKCGKI 346

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            + AR VF  +  K +A+WN ++  + ++    E   LF  + ++G QPD +TF  LL+AC
Sbjct: 347  EDARLVFECTDEKDIATWNAIMSAYLLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSAC 406

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
            K  G +EE  +YF SM   Y I PT++HY+CMVD++G AG L+E+ + I+ M  +PD  +
Sbjct: 407  KQEGSMEEARRYFYSMEDVYGIQPTLKHYTCMVDIMGMAGLLEESLELIQKMQLEPDGCL 466

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            W  LL +C++H +LE  E A++ LF+LEP N++NY  + N+ A +  WE  E LR +M E
Sbjct: 467  WSILLKACKLHSNLEIGEKAAKALFELEPNNTSNYMSLSNIYADNGLWESTEALRVAMTE 526

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
             G+      S + +   VH F A  + HPA  +I      L   M++ GY P      QD
Sbjct: 527  QGLNVERQCSRLYLGTDVHTFEAGDSSHPAFEKILSTWNDLSDRMEQSGYPP------QD 580

Query: 995  ID---EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
            I+     E   +   HTE++A+ YGL+  +    IR+ KN R+C +CH++ K++S    R
Sbjct: 581  IEPYSNAEADPLSCQHTERIALCYGLISVRVHDLIRISKNFRMCMECHSSIKFISRDMNR 640

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EIF+ DG  +HHF+ G CSC D W
Sbjct: 641  EIFVSDGCTYHHFQNGACSCGDMW 664



 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 227/435 (52%), Gaps = 32/435 (7%)

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           P+  +V+ +L A T L  L  G++ H Y++R G+  ++Y+G+SL+ MY +      A+ V
Sbjct: 7   PDAVTVASILPACTGLMALGIGKQLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSV 66

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           F  ++ +N   WN LI  Y  +     A +    M+E  ++PD +++NS ++ Y+  GQ 
Sbjct: 67  FAAIEEKNATVWNELIRSYINEERMNEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQK 126

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-------------Q 696
           ++A  ++ +M   G+ PNVV+  +LISG   +  + ++L+ F  MQ              
Sbjct: 127 EQAYTLLSNMVEIGLKPNVVSMNALISGLHHHGRHADALEAFRYMQVSSDGEAKGWALPG 186

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
             I+PN TT++S+L     L L + GKE+HC   ++G I + +V++ L+D+Y K+G++ +
Sbjct: 187 NSIQPNGTTITSVLSLLTDLRLDRLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGDVGT 246

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           A +VFR+ +NK + +WN ++  +      + A+ LFHE++++   P+ +T    L +   
Sbjct: 247 ADKVFRRISNKNVVTWNSILASYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALLSSGM 306

Query: 817 SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
           +  ++ G +    +  ++         S ++D+ GK G +++A   +     + D   W 
Sbjct: 307 TMALQHGRELHGYIRKNWPDGYPTALASALIDMYGKCGKIEDA-RLVFECTDEKDIATWN 365

Query: 877 ALLGSC---RIHGHLEYAEIASRRLFK------LEPCNSANYNLMMNLLAMSNRWEDVER 927
           A++ +    RI G +       ++LFK      ++P +   + ++++        E+  R
Sbjct: 366 AIMSAYLLHRIPGEV-------KKLFKYIEQSGIQP-DPVTFIILLSACKQEGSMEEARR 417

Query: 928 LRHSMDEV-GVKSVL 941
             +SM++V G++  L
Sbjct: 418 YFYSMEDVYGIQPTL 432



 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 207/468 (44%), Gaps = 62/468 (13%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL  CT LMA  +G ++H+ +I+ G   +V++  +L+  Y +C +   A  +F+ + + +
Sbjct: 15  ILPACTGLMALGIGKQLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGYARSVFAAIEE-K 73

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
           +  +WNE+I   +  E+   A + FR M+ +  +  + T    + A A+ G   +   + 
Sbjct: 74  NATVWNELIRSYINEERMNEAWEAFRLMKENGLQPDTITYNSFIAAYARAGQKEQAYTLL 133

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK---DHNLSSW----------- 465
             +++  L+ N+   N LIS    + +   A   F  M+   D     W           
Sbjct: 134 SNMVEIGLKPNVVSMNALISGLHHHGRHADALEAFRYMQVSSDGEAKGWALPGNSIQPNG 193

Query: 466 ---------------------------------NSMISS-----YTGLGYVDVAWSLFNK 487
                                            N  +SS     Y   G V  A  +F +
Sbjct: 194 TTITSVLSLLTDLRLDRLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGDVGTADKVFRR 253

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
           +++     +++TWN +L+ +  +   +  L L   M      PN  ++ + L +      
Sbjct: 254 ISNK----NVVTWNSILASYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALLSSGMTMA 309

Query: 548 LKYGRESHGYILRNGLD-YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
           L++GRE HGYI +N  D Y   + ++L+DMY K   +++A+ VF+    ++I  WN+++S
Sbjct: 310 LQHGRELHGYIRKNWPDGYPTALASALIDMYGKCGKIEDARLVFECTDEKDIATWNAIMS 369

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIY 665
            Y    +    KK+   +E+  I+PD V++  L+S     G  +EA    + M++  GI 
Sbjct: 370 AYLLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGSMEEARRYFYSMEDVYGIQ 429

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           P +  +T ++          ESL+   +MQ   ++P+    S LL+ C
Sbjct: 430 PTLKHYTCMVDIMGMAGLLEESLELIQKMQ---LEPDGCLWSILLKAC 474



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 3/248 (1%)

Query: 285 LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           L G  +      +T +L L T L    LG EVH    + G   ++ +   L++ YGK  D
Sbjct: 184 LPGNSIQPNGTTITSVLSLLTDLRLDRLGKEVHCYAFRSGLISNIFVSSKLVDLYGKTGD 243

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           V +A+K+F  +S+ ++ + WN I+    +N K E A+KLF EM  S+      T+   L 
Sbjct: 244 VGTADKVFRRISN-KNVVTWNSILASYRQNRKPEIALKLFHEMIKSNLLPNLVTLQIALL 302

Query: 405 ACAKVGAFHEGKQIHGYVLKSALES-NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +     A   G+++HGY+ K+  +    ++ + LI MY +  K+E A  VF+   + +++
Sbjct: 303 SSGMTMALQHGRELHGYIRKNWPDGYPTALASALIDMYGKCGKIEDARLVFECTDEKDIA 362

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           +WN+++S+Y           LF  +  S IQPD +T+  LLS     GS +        M
Sbjct: 363 TWNAIMSAYLLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGSMEEARRYFYSM 422

Query: 524 QSL-GFRP 530
           + + G +P
Sbjct: 423 EDVYGIQP 430



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 2/186 (1%)

Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
           E   P++ T++S+L  C GL  L  GK++H   ++ G   + Y+ + LI MYS+ G    
Sbjct: 3   ESESPDAVTVASILPACTGLMALGIGKQLHSYVIRCGIKLNVYIGSSLIGMYSECGEFGY 62

Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
           AR VF     K    WN +I  +       EA   F  + E G QPD IT+ + +AA   
Sbjct: 63  ARSVFAAIEEKNATVWNELIRSYINEERMNEAWEAFRLMKENGLQPDTITYNSFIAAYAR 122

Query: 817 SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
           +G  E+ +    +M  +  + P +   + ++  L   G   +A +  R M    D    G
Sbjct: 123 AGQKEQAYTLLSNM-VEIGLKPNVVSMNALISGLHHHGRHADALEAFRYMQVSSDGEAKG 181

Query: 877 -ALLGS 881
            AL G+
Sbjct: 182 WALPGN 187



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 6/229 (2%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           L+  Y + GD  +A K F    +++   W+S L  Y     + +  L+++ E+    ++ 
Sbjct: 234 LVDLYGKTGDVGTADKVFRRISNKNVVTWNSILASYRQ-NRKPEIALKLFHEMIKSNLLP 292

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD-FDVHLKCALMNFYGKCRDVESANKL 351
               L I L      MA   G E+H  + K   D +   L  AL++ YGKC  +E A  +
Sbjct: 293 NLVTLQIALLSSGMTMALQHGRELHGYIRKNWPDGYPTALASALIDMYGKCGKIEDARLV 352

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F E +D +D   WN I+   L +       KLF+ ++ S  +    T + +L AC + G+
Sbjct: 353 F-ECTDEKDIATWNAIMSAYLLHRIPGEVKKLFKYIEQSGIQPDPVTFIILLSACKQEGS 411

Query: 412 FHEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
             E ++ + Y ++    ++  L    C++ +      LE +  +   M+
Sbjct: 412 MEEARR-YFYSMEDVYGIQPTLKHYTCMVDIMGMAGLLEESLELIQKMQ 459


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/738 (30%), Positives = 342/738 (46%), Gaps = 102/738 (13%)

Query: 373  RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            +  K + A    +EM  +       +   + +AC K+ +  +G+ IH  + ++    + S
Sbjct: 64   KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            + NCL+ MY          +VFD M   NL                              
Sbjct: 124  IENCLLRMYCDCGSXIDVQKVFDEMLMKNL------------------------------ 153

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                 ++W  ++S +  +G  +  + L   MQ+ G RPN +    +LQ+      L+ G+
Sbjct: 154  -----VSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGK 208

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
            + H +++R  L+ ++ V T++ +MYV+   L+ A+ VFD M  +N V W  L+ GY    
Sbjct: 209  QMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268

Query: 613  LFVNAKKMLNQMEEEEIKPD-------------LVSWN---------------------- 637
                A ++  +M  E ++ D             L  W+                      
Sbjct: 269  KLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGT 328

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
             LV  Y   G  + A      +      PN V+W++LISG  Q+    + +K F  ++ E
Sbjct: 329  PLVDFYVKCGDIESAYRSFGRISE----PNDVSWSALISGFSQSGRLEDCIKIFTSLRSE 384

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             +  NS   +S+ Q C     L  G + H   +K G +   Y  + ++ MYSK G L  A
Sbjct: 385  GVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYA 444

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
            R  F         +W  +I G+A +GN  EA+  F  +   G +P+A+TF A+L AC +S
Sbjct: 445  RRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHS 504

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLV E  +Y  SMS DY + PTI+HY CM+D   +AG L EA + I  MPF+PDA  W +
Sbjct: 505  GLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKS 564

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LLG C  H  L+  +IA+  LF+L+P ++A Y L+ NL +   +WE+   +R  M E  +
Sbjct: 565  LLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAEREL 624

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            K  +  SWI +   VH                         ++ L    D  C      E
Sbjct: 625  KKEVSCSWISVKGQVH-----------------------RPVRLLNEEDDVSCSLPARKE 661

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            +     LL H+EKLAI +GL+ T+  API V KN R C DCH   K +S+V GR+I +RD
Sbjct: 662  Q-----LLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRD 716

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFHHF+ G+CSCND W
Sbjct: 717  STRFHHFKSGKCSCNDYW 734



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 143/577 (24%), Positives = 246/577 (42%), Gaps = 108/577 (18%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+++E  +   E+    V         + + C KL +   G  +H  L +   +    ++
Sbjct: 66  GKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIE 125

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             L+  Y  C       K+F E+  +++ + W  +I    +N + E AI+LF +MQ S  
Sbjct: 126 NCLLRMYCDCGSXIDVQKVFDEML-MKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGI 184

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           +  S   + +LQ+C        GKQ+H +V+++ L +N++V   + +MY R   LE A  
Sbjct: 185 RPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKL 244

Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           VFD M   N  +W  ++  YT    ++VA  LF +M    ++ D   +            
Sbjct: 245 VFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVF------------ 292

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
                                  S+VL+    L     G++ H +I++ G + ++ VGT 
Sbjct: 293 -----------------------SIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTP 329

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY--------CFK--------GLFVN 616
           L+D YVK   +++A   F  +   N V+W++LISG+        C K        G+ +N
Sbjct: 330 LVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLN 389

Query: 617 ------------AKKMLN---QMEEEEIKPDLVSW----NSLVSGYSIWGQSKEALVIIH 657
                       A+  LN   Q   + IK  LVS+    +++V+ YS  G+   A     
Sbjct: 390 SFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFE 449

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            +      P+ V WT++ISG   + N  E+L FF +MQ   ++PN+ T  ++L  C   G
Sbjct: 450 SIDE----PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSG 505

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
           L+   K+        G +   Y     ID Y                        +CMI 
Sbjct: 506 LVAEAKQYL------GSMSRDYGVKPTIDHY------------------------DCMID 535

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            ++  G   EA+ L + +    F+PDA+++ +LL  C
Sbjct: 536 TYSRAGLLXEALELINRM---PFEPDAMSWKSLLGGC 569



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 161/323 (49%), Gaps = 6/323 (1%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H+ +I+     N++  V++ I + Y+  G    A   F    +++   W+  +  Y 
Sbjct: 208 KQMHSHVIRAQ--LNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYT 265

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
               +++  LE++  +  +GV     + +I+LK+C  L  + +G ++H+ ++K G + +V
Sbjct: 266 Q-AKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEV 324

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +   L++FY KC D+ESA + F  +S+  +D+ W+ +I    ++ + E+ IK+F  ++ 
Sbjct: 325 SVGTPLVDFYVKCGDIESAYRSFGRISE-PNDVSWSALISGFSQSGRLEDCIKIFTSLRS 383

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
                 S     + QACA     + G Q HG  +K  L S L   + +++MYS+  +L+ 
Sbjct: 384 EGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDY 443

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A R F+S+ + +  +W ++IS Y   G    A   F +M S  ++P+ +T+  +L+    
Sbjct: 444 ARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSH 503

Query: 510 HGSYQNVLTLLRGM-QSLGFRPN 531
            G        L  M +  G +P 
Sbjct: 504 SGLVAEAKQYLGSMSRDYGVKPT 526



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 38/301 (12%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H+ ++K+G    S+  V + L+  Y++ GD  SA ++F      +   WS+ +  + 
Sbjct: 309 KQIHSHIVKLGX--ESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF- 365

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
           S  G +++ ++++  L  +GV+  S I T + + C       +G + H   IKRG    +
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYL 425

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           + + A++  Y KC  ++ A + F  + D  D + W  II     +     A+  FR MQ 
Sbjct: 426 YGESAMVTMYSKCGRLDYARRAFESI-DEPDAVAWTAIISGYAYHGNAAEALGFFRRMQS 484

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
              +  + T + +L AC+  G   E KQ  G +                   SR+  ++ 
Sbjct: 485 YGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSM-------------------SRDYGVKP 525

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
                    DH    ++ MI +Y+  G +  A  L N+M     +PD ++W  LL G + 
Sbjct: 526 TI-------DH----YDCMIDTYSRAGLLXEALELINRMP---FEPDAMSWKSLLGGCWA 571

Query: 510 H 510
           H
Sbjct: 572 H 572


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/571 (35%), Positives = 307/571 (53%), Gaps = 34/571 (5%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            +LQ+      L+ GR+ HG +L +GL  D  + T L+D+Y     + +A+ +FD M  RN
Sbjct: 68   ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW-------------------NS 638
            +  WN LI  Y  +G    A ++   M E  ++PD  ++                   + 
Sbjct: 128  VFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQ 187

Query: 639  LVSGYSIWGQ------------SKEALVIIHHMKNSGI-YPNVVTWTSLISGSLQNENYR 685
             VSG + WGQ            +K   V        GI   + V W S+I+   QN    
Sbjct: 188  RVSG-TRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM 246

Query: 686  ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            E+L     M    I P   T+ S +        L  G+E+H    + GF     + T L+
Sbjct: 247  EALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLV 306

Query: 746  DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQPDA 804
            DMY+KSG ++ AR +F +   + L SWN MI G+ ++G+  EA+ LF+++  +    PD 
Sbjct: 307  DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDN 366

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            ITF  +L+AC + G+VEE  ++F  M   Y+I PT++HY+C++D+LG  G  +EA+D I+
Sbjct: 367  ITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIK 426

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWED 924
             M  +PD+ IWGALL  C+IH ++E  E+A ++L +LEP ++ NY  + N+ A S +WE 
Sbjct: 427  GMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEK 486

Query: 925  VERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGY 984
              R+R  M   G+K +L  SWI++    H F    A HP + EIY EL  L   M   GY
Sbjct: 487  AARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGY 546

Query: 985  VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKY 1044
            VPD   V+ ++D++EK  ++ SH+E+LAI +GL+ T     + V KN RVC DCH   K 
Sbjct: 547  VPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKL 606

Query: 1045 MSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +S +  REI +RD  R+HHF  GECSC D W
Sbjct: 607  ISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 207/477 (43%), Gaps = 48/477 (10%)

Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           T IL+ C    +   G ++H  L+  G   D  L   L++ Y  C  V  A +LF  +  
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
             +  LWN +I    R    E A++L+R M     +  + T   +L+ACA +     G++
Sbjct: 126 -RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGRE 184

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +H  V  +    ++ VC  ++ MY++   ++ A  VFD +                    
Sbjct: 185 VHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVR----------------- 227

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
                             D + WN +++ +  +G     L L R M + G  P  +++  
Sbjct: 228 ------------------DAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVS 269

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            + A  +   L  GRE HG+  R G      + TSL+DMY K+  +Q A+ +F+ +  R 
Sbjct: 270 AVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRE 329

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQME-EEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           +V+WN++I GY   G    A  + N+M+ + ++ PD +++  ++S  +  G  +EA    
Sbjct: 330 LVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFF 389

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
           + M N+  I P V  +T +I        + E+      M    I+P+S    +LL  C  
Sbjct: 390 YLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMS---IEPDSGIWGALLNGCK- 445

Query: 716 LGLLQNGKEIHCLCLKNGF---IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
              +    E+  L L+       +DA     L ++Y++SG  + A  V +   N+ L
Sbjct: 446 ---IHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGL 499



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 153/345 (44%), Gaps = 13/345 (3%)

Query: 172 TSLALPPTDTLAKQAQLSCI-----SSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNS 226
           T+ ALPP    A             SS   + + T+  +   +  S  A     G++  S
Sbjct: 32  TARALPPNTGFAASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVS 91

Query: 227 ---DDMVKS--LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEV 281
               D V S  L+  Y   G    A + F     R+   W+  +  Y   G   +  + +
Sbjct: 92  GLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPR-EAAVRL 150

Query: 282 WGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
           +  +   GV   +    ++LK C  L+    G EVH  +    +  DV +   +++ Y K
Sbjct: 151 YRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAK 210

Query: 342 CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
           C  V+ A  +F  ++ + D ++WN +I    +N +   A+ L R+M  +       T+V 
Sbjct: 211 CGCVDDARAVFDGIA-VRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVS 269

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            + A A   A   G+++HG+  +        +   L+ MY+++  +++A  +F+ +    
Sbjct: 270 AVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRE 329

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQPDIITWNCLLS 505
           L SWN+MI  Y   G+ D A +LFNKM   +++ PD IT+  +LS
Sbjct: 330 LVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLS 374



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 8/178 (4%)

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           +S+LQ+C   G L+ G+++H   L +G   D  ++T L+D+Y+  G +  AR +F     
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
           + +  WN +I  +A  G  + A+ L+  ++E G +PD  T+  +L AC     +E G + 
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 827 FDSMS-TDYNIIPTIEHYSC--MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
              +S T +      + + C  +VD+  K G +D+A      +  + DA +W +++ +
Sbjct: 186 HQRVSGTRWG----QDVFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMIAA 238


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/611 (33%), Positives = 337/611 (55%), Gaps = 33/611 (5%)

Query: 498  ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
            ++W  L+SG   +  + + L     M+  G  P   ++S   +A   L     G + H  
Sbjct: 7    VSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCV 66

Query: 558  ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
             +R G D +L+V ++L DMY K   L  A  VFD M  ++ VAW ++I GY   G    A
Sbjct: 67   GVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAA 126

Query: 618  KKMLNQMEEEE-IKPDLVSWNSLVS---------------------GYSIWGQSKEALVI 655
                  M+ E  +  D   + S++S                     G+ +    + AL+ 
Sbjct: 127  VLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALID 186

Query: 656  IHHMKNS--------GIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            ++              I P   NVV+ TS+I G ++ +   E+L  +++++++ ++PN  
Sbjct: 187  MYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEF 246

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T SS+++ C    LL+ G ++H   +K   I+D++V + L+DMY K G +  + ++F + 
Sbjct: 247  TFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI 306

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              +T  +WN +I  FA +G+G+EAI  F  ++ +G +P+ I F +LL AC ++GLV+EG 
Sbjct: 307  EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGL 366

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            KYF SM   + I P  EHYSC++D  G+AG LDEA+ FI  MP KP+A  W +LLG+CR+
Sbjct: 367  KYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRM 426

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
             G  E  E+A++ L KLEP N+  +  +  + A   +WEDV+ +R  M +  +K +  +S
Sbjct: 427  RGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFS 486

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            W+  ++  HVF +E   HP   +IY +L  L + +K+ GY+PDT  +  ++++  K ++L
Sbjct: 487  WVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERIL 546

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
              H+E++A+ + L+   +  PI V KN R+C DCHTA K++  V  R+I +RD +RFHHF
Sbjct: 547  RYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHF 606

Query: 1065 REGECSCNDCW 1075
              G CSC D W
Sbjct: 607  VNGRCSCGDYW 617



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 209/465 (44%), Gaps = 46/465 (9%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H   ++ GFD ++ +   L + Y KC  +  A ++F ++   +D + W  +I    +N
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQ-KDAVAWTAMIDGYAKN 120

Query: 375 EKWENAIKLFREMQFSS-AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
              E A+  FR+M+      A       +L A   +      K IH  V K+  E  ++V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 434 CNCLISMYSRNNKLELATRVFD-SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            N LI MY+++  +E A+RV        N+ S  SMI  Y     V+ A  ++ ++    
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++P+  T++ ++ G                                +QA     LL+ G 
Sbjct: 241 VEPNEFTFSSMIKG------------------------------CAMQA-----LLEQGA 265

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + H  +++  L  D +VG++L+DMY K   +  + ++F+ ++ R  +AWN++I+ +   G
Sbjct: 266 QLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHG 325

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
               A +  ++M    I+P+ +++ SL++  S  G   E L   + MK + GI P    +
Sbjct: 326 HGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHY 385

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
           + +I    +     E+ KF  +M    IKPN+    SLL  C   G  + G E+    L 
Sbjct: 386 SCIIDTYGRAGRLDEAYKFISEMP---IKPNAYGWCSLLGACRMRGSKELG-EVAAQNLM 441

Query: 732 NGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWN 773
                +  +   L  +Y+  G   ++K+ R++ R S  K L  ++
Sbjct: 442 KLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFS 486



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 43/344 (12%)

Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--------------------- 631
           M  RN V+W +L+SG     +  +A      M    + P                     
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 632 --------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISG 677
                         +L   ++L   YS  G   EA  +   M       + V WT++I G
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQK----DAVAWTAMIDG 116

Query: 678 SLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
             +N +   ++  F  M++E  +  +     S+L   GGL      K IHC   K GF  
Sbjct: 117 YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 176

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFR-KSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
           +  V   LIDMY+KS +++SA  V +       + S   MI G+      +EA++++ EL
Sbjct: 177 EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 236

Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
              G +P+  TF++++  C    L+E+G +   +     ++I      S +VD+ GK G 
Sbjct: 237 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQ-LHAQVIKTDLIRDSFVGSTLVDMYGKCGL 295

Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
           +  +      + ++ D   W A++     HGH   A  A  R+ 
Sbjct: 296 ISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHGREAIQAFDRMI 338



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 164/380 (43%), Gaps = 19/380 (5%)

Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
           Q+H   ++   ++ L V + L  MYS+   L  A RVFD M   +  +W +MI  Y   G
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 477 YVDVAWSLFNKMN-SSRIQPDIITWNCLL--SGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
            ++ A   F  M     +  D   +  +L  SG    G     +     +   GF     
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCC--VTKAGFELE-- 177

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILR-NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
               V  A+ ++       ES   +L+ +   +++  GTS++D Y++ DC++ A  ++  
Sbjct: 178 --VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVE 235

Query: 593 MKNRNI----VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           ++ + +      ++S+I G   + L     ++  Q+ + ++  D    ++LV  Y   G 
Sbjct: 236 LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGL 295

Query: 649 SKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
              ++ + + ++    Y   + W ++I+   Q+ + RE+++ F +M    I+PN     S
Sbjct: 296 ISLSMQLFNEIE----YRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVS 351

Query: 709 LLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           LL  C   GL+  G K  + +   +G        + +ID Y ++G L  A +   +   K
Sbjct: 352 LLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIK 411

Query: 768 TLASWNCMIMGFAIYGNGKE 787
             A   C ++G       KE
Sbjct: 412 PNAYGWCSLLGACRMRGSKE 431



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 141/310 (45%), Gaps = 13/310 (4%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSR- 295
           Y + G  + A + F     +    W++ ++ Y    G ++  +  + ++  +G++   + 
Sbjct: 86  YSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK-NGSLEAAVLSFRDMKREGLVGADQH 144

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           +   +L     L   WL   +H  + K GF+ +V ++ AL++ Y K  DVESA+++    
Sbjct: 145 VFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK-- 202

Query: 356 SDLEDDLLWN-----EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
               D   WN      +I   +  +  E A+ ++ E++    +    T   M++ CA   
Sbjct: 203 ---IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQA 259

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
              +G Q+H  V+K+ L  +  V + L+ MY +   + L+ ++F+ ++     +WN++I+
Sbjct: 260 LLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVIN 319

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFR 529
            +   G+   A   F++M  S I+P+ I +  LL+     G     L     M ++ G  
Sbjct: 320 VFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIE 379

Query: 530 PNGSSVSVVL 539
           P     S ++
Sbjct: 380 PKEEHYSCII 389



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 5/200 (2%)

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
           V+E L ++ EL  +GV       + ++K C        G ++HA +IK     D  +   
Sbjct: 226 VEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST 285

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ YGKC  +  + +LF+E+ +   D+ WN +I V  ++     AI+ F  M +S  + 
Sbjct: 286 LVDMYGKCGLISLSMQLFNEI-EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 344

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESNLSVCNCLISMYSRNNKLELATR 452
                V +L AC+  G   EG + + Y +K A  +E      +C+I  Y R  +L+ A +
Sbjct: 345 NHIAFVSLLTACSHAGLVDEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYK 403

Query: 453 VFDSMK-DHNLSSWNSMISS 471
               M    N   W S++ +
Sbjct: 404 FISEMPIKPNAYGWCSLLGA 423


>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 642

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/604 (34%), Positives = 328/604 (54%), Gaps = 35/604 (5%)

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLS--GHFTHGSYQN-VLTLLRGMQSLG-FRPNGS 533
            +D A ++F +M     +P+   WN +L           Q+  L L   M   G  +PN  
Sbjct: 68   IDYARAVFRQMP----EPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRF 123

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            +   VL+A      L+ G++ HG I++ G   D +V ++L+ MYV    +++A  +F   
Sbjct: 124  TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF--- 180

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--LVSWNSLVSGYSIWGQSKE 651
              +N+V ++    G C             QME ++ K D  +V WN ++ G    G  K 
Sbjct: 181  -CKNVVDFD----GSC-------------QMELDKRKQDGNVVLWNIMIDGQVRLGDIKS 222

Query: 652  ALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQ 711
            A  +   M       +VV+W  +ISG  QN ++ E++  F +MQ  +I PN  T+ S+L 
Sbjct: 223  AKNLFDEMPPR----SVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLP 278

Query: 712  TCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLAS 771
                +G L+ GK IH    KN    D  + + L+DMYSK G++  A +VF     +   +
Sbjct: 279  AIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAIT 338

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            W+ +I  FA++G  ++AI+ FH + + G  P+ + +  +L+AC ++GLVEEG  +F  M 
Sbjct: 339  WSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMV 398

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
                + P IEHY CMVDLLG+AG+L+EA + IR MP +PD  IW ALLG+C++H +L+  
Sbjct: 399  KVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMG 458

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
            E  +  L +L P +S +Y  + NL A    WE V R+R  M  + ++     SWI+I  I
Sbjct: 459  ERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGI 518

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKL 1011
            +H F  E   H    EI   L  +  +++  GY P+T  V+ + DE+E+ + L  H+EK+
Sbjct: 519  IHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKI 578

Query: 1012 AIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            A+ +GL+ T  + P++++KN R+C DCH + K +SL+  R+I +RD  RFH F  G CSC
Sbjct: 579  AVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSC 638

Query: 1072 NDCW 1075
             D W
Sbjct: 639  MDYW 642



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 214/468 (45%), Gaps = 31/468 (6%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYG-KCRDVESANKLFSEVSDLEDDLLWNEI--IMVK 371
           ++HA  IK G   D      ++ F     RD++ A  +F ++ +  +   WN I  I+ +
Sbjct: 37  QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPE-PNCFCWNTILRILAE 95

Query: 372 LRNEKWEN-AIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
             +E  ++ A+ LF  M        +R T   +L+ACA+     EGKQIHG ++K     
Sbjct: 96  TNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHE 155

Query: 430 NLSVCNCLISMYSRNNKLELATRVF---------------DSMK-DHNLSSWNSMISSYT 473
           +  V + L+ MY     +E A  +F               D  K D N+  WN MI    
Sbjct: 156 DEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQV 215

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
            LG +  A +LF++M        +++WN ++SG+  +G +   + L + MQS    PN  
Sbjct: 216 RLGDIKSAKNLFDEMPPR----SVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYV 271

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           ++  VL A+  +  L+ G+  H Y  +N ++ D  +G++L+DMY K   +  A +VF+ +
Sbjct: 272 TLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETL 331

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
             RN + W+++I  +   G   +A    + M +  + P+ V++  ++S  S  G  +E  
Sbjct: 332 PKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGR 391

Query: 654 VIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
               HM K  G+ P +  +  ++    +  +  E+ +    M    I+P+     +LL  
Sbjct: 392 SFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMP---IEPDDVIWKALLGA 448

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
           C     L+ G+ +    L      D+     L ++Y+  GN ++   V
Sbjct: 449 CKMHKNLKMGERV-AETLMELAPHDSGSYVALSNLYASLGNWEAVARV 495



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 147/347 (42%), Gaps = 51/347 (14%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           +K  HA  IK G+I +     + + F      D   A   F      +   W++ L    
Sbjct: 35  LKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILA 94

Query: 270 SFGGE--VQELLEVWGELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
               E    E L ++  +   G +  +R     +LK C +      G ++H  ++K GF 
Sbjct: 95  ETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFH 154

Query: 327 FD---------VHLKCALM------------NFYGKCR---------------------- 343
            D         +++ CA+M            +F G C+                      
Sbjct: 155 EDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQ 214

Query: 344 ----DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI 399
               D++SA  LF E+      + WN +I    +N  +  AI LF+EMQ S+      T+
Sbjct: 215 VRLGDIKSAKNLFDEMPP-RSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTL 273

Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
           V +L A A++GA   GK IH Y  K+ +E +  + + L+ MYS+   ++ A +VF+++  
Sbjct: 274 VSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPK 333

Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            N  +W+++I ++   G  + A   F+ M  + + P+ + +  +LS 
Sbjct: 334 RNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSA 380



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYS-KSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
           K++H + +K G I+D   A  +I   +  S ++  AR VFR+        WN ++   A 
Sbjct: 36  KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAE 95

Query: 782 YGN---GKEAILLFHELLETG-FQPDAITFTALLAACKNSGLVEEG 823
             +     EA++LF  +L  G  +P+  TF ++L AC  +  + EG
Sbjct: 96  TNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREG 141


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/580 (33%), Positives = 321/580 (55%), Gaps = 31/580 (5%)

Query: 527  GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            G R + ++V  VL AV EL+ LK G +     ++ G    + + T L+ ++ K   ++ A
Sbjct: 26   GPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIA 85

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
            + +F  ++ +++++ N++ISG+   G   ++ ++  ++     +    +   L+  YS +
Sbjct: 86   RLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPF 145

Query: 647  GQS---------------------KEALVIIHHMKNSGIYP----------NVVTWTSLI 675
            G S                       AL  ++   N  I+            + +W ++I
Sbjct: 146  GHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMI 205

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            SG  QN     ++  F  MQ+ ++ PN  T++S+L  C  +G L  G+ +H L   N F 
Sbjct: 206  SGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFE 265

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             + YV+T LIDMY+K G++  ARE+F     K   +WN MI G+ ++G+G+EA+ LF+++
Sbjct: 266  SNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDM 325

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
            L +  +P  +TF ++L AC ++GLV+EG   F +M  D+   P  EHY+CMVD+LG+AG 
Sbjct: 326  LSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQ 385

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L +A +FI+ MP +P   +WGALLG+C IH     A +AS +LF+L+P N   Y LM N+
Sbjct: 386  LKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNI 445

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             ++  ++     +R    +  +      + I+I Q+ HVF++    HP +  IY EL  L
Sbjct: 446  YSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKL 505

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
              +M + G+  +T  V  D++EEEK   +  H+EKLAI +GL+ T+  A IR+IKN RVC
Sbjct: 506  TGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVC 565

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             DCH   K++S +  R I +RD  RFHHF++G CSC D W
Sbjct: 566  LDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 202/440 (45%), Gaps = 41/440 (9%)

Query: 276 QELLEVWGEL-HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
           ++ + V+G++  G G  F    +  +L    +L    LG+++    IK GF   V L   
Sbjct: 12  EDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTG 71

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           L++ + KC +VE A  LF E+   +D +  N +I     N + E++++LF+E+  S  + 
Sbjct: 72  LISLFSKCGEVEIARLLFGEIRK-KDLISCNAMISGFTCNGETEDSVRLFKELLSSGERV 130

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
            S TIV ++   +  G  +    IHG+ +K  + S+ SV   L ++Y R N++  A ++F
Sbjct: 131 SSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLF 190

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D   +  L+SWN+                                   ++SG   +G   
Sbjct: 191 DESAEKTLASWNA-----------------------------------MISGCTQNGLTD 215

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
             ++L + MQ     PN  +V+ +L A  ++  L  G   H  I  N  + ++YV T+L+
Sbjct: 216 AAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALI 275

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
           DMY K   +  A+E+FD M  +N V WN++ISGY   G    A K+   M    +KP  +
Sbjct: 276 DMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGL 335

Query: 635 SWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
           ++ S++   S  G  KE   I H M +  G  P    +  ++    +    +++L+F   
Sbjct: 336 TFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKA 395

Query: 694 MQQEDIKPNSTTMSSLLQTC 713
           M    ++P      +LL  C
Sbjct: 396 MP---VEPGPPVWGALLGAC 412



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 153/324 (47%), Gaps = 11/324 (3%)

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWN-SLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           ++  +VKN C +++  VF +M   N   ++ + +         +   K+  Q+    IK 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 632 DLVSWNSLVSG----YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRES 687
              S  SL++G    +S  G+ + A ++   ++      ++++  ++ISG   N    +S
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKK----DLISCNAMISGFTCNGETEDS 116

Query: 688 LKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           ++ F ++     + +S+T+  L+      G       IH  C+K G +  + V+T L  +
Sbjct: 117 VRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTV 176

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           Y +   +  AR++F +SA KTLASWN MI G    G    AI LF  + +    P+ +T 
Sbjct: 177 YCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTV 236

Query: 808 TALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP 867
           T++L+AC   G +  G ++  S+         +   + ++D+  K G +  A +    MP
Sbjct: 237 TSILSACAQIGALSLG-EWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMP 295

Query: 868 FKPDATIWGALLGSCRIHGHLEYA 891
            K + T W A++    +HGH + A
Sbjct: 296 EKNEVT-WNAMISGYGLHGHGQEA 318



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 34/253 (13%)

Query: 674 LISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           +ISG ++N  + +S++ F  M   +  + + TT+ ++L     L  L+ G +I CL +K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
           GF     + TGLI ++SK G ++ AR +F +   K L S N MI GF   G  ++++ LF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 793 HELLETGFQPDAITFTAL-----------LAACKNSGLVEEGWKYFDSMST--------- 832
            ELL +G +  + T   L           L  C +   V+ G     S+ST         
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 833 ----------DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGALL 879
                     D +   T+  ++ M+    + G  D A    +TM      P+     ++L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 880 GSCRIHGHLEYAE 892
            +C   G L   E
Sbjct: 241 SACAQIGALSLGE 253


>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/662 (31%), Positives = 350/662 (52%), Gaps = 73/662 (11%)

Query: 415  GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
             K++H  ++KS L  +      LI  Y +   L+ A ++FD++   +  +W +++S+   
Sbjct: 27   AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86

Query: 475  LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                  A+S+   +    +QPD          HF   S      L++   +LG      S
Sbjct: 87   SNLPHKAFSISLPILHEGLQPD----------HFVFSS------LIKACANLG------S 124

Query: 535  VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            V V           K G++ H   L +    D  V +SL+DMY K +     + VFD++ 
Sbjct: 125  VHV-----------KLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSI- 172

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
                                               +   +SW +++SGY+  G+  EAL 
Sbjct: 173  ----------------------------------FELSSISWTAMISGYARSGRKLEALE 198

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK-PNSTTMSSLLQTC 713
            +         + N+  WT+LISG +Q+ N  ++L  F++M++E +   +   +SS++  C
Sbjct: 199  LF----RESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGAC 254

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
                + + GK++HC+ +  G+    +++  L+DMY+K  ++ +A+ +F +   K + SW 
Sbjct: 255  ANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWT 314

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             +I+G A +G  +EA+ L+ +++  G +P+ +TF  L+ AC + GLV +G   F SM  D
Sbjct: 315  SIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVED 374

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            + I P+++HY+C++DL  ++G+LDEA + IRTMP KPD   W ALL +C+ HG+ + A  
Sbjct: 375  FGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVR 434

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
             +  L  L+P + ++Y L+ N+ A +  WE+V  +R  M    VK V  +S + + +   
Sbjct: 435  IADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQ 494

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
            VF A  A  P   EI   +  L SEM++ GYVPDT  V  D+D++EK + L  H+E+LA+
Sbjct: 495  VFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLAL 554

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             YGL+K      IR++KN RVC DCHT  K +S +  REI++RD  R+HHF++G+CSCND
Sbjct: 555  AYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCND 614

Query: 1074 CW 1075
             W
Sbjct: 615  FW 616



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 231/517 (44%), Gaps = 37/517 (7%)

Query: 311 WLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
           ++  ++HA +IK G +        L++ YGKC  ++ A KLF  +   +D + W  ++  
Sbjct: 25  FIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQ-QDHVAWATVLSA 83

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE--GKQIHGYVLKSALE 428
              +     A  +   +     +        +++ACA +G+ H   GKQ+H   L S   
Sbjct: 84  CNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFF 143

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            +  V + L+ MY++    +    VFDS+ + +  SW +MIS Y   G    A  LF   
Sbjct: 144 EDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELF--- 200

Query: 489 NSSRIQP--DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV-SVVLQAVTEL 545
              R  P  ++  W  L+SG    G+  + L L   M+  G       V S V+ A    
Sbjct: 201 ---RESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANS 257

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
            + + G++ H  ++  G +  L++  +L+DMY K   +  A+ +F  M+ +++V+W S+I
Sbjct: 258 AVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSII 317

Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGI 664
            G    GL   A  + + M    +KP+ V++  L+   S  G   +   +   M ++ GI
Sbjct: 318 VGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGI 377

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
            P++  +T L+    ++ +  E+      M    +KP+  T ++LL  C   G  +    
Sbjct: 378 RPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VKPDEPTWAALLSACKHHGNTKMAVR 434

Query: 725 I--HCLCLKNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWNCMIMG- 778
           I  H L LK    +D      L ++Y+ +G   N+   R++      K +  ++C+ +G 
Sbjct: 435 IADHLLDLKP---EDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGR 491

Query: 779 -FAIYGNG------KEAIL-----LFHELLETGFQPD 803
            F ++  G      K+ IL     L  E+   G+ PD
Sbjct: 492 EFQVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPD 528



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 130/258 (50%), Gaps = 8/258 (3%)

Query: 273 GEVQELLEVWGELHGKGV-IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G   + L ++ E+  +GV I    +L+ ++  C       LG +VH  +I  G++  + +
Sbjct: 222 GNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFI 281

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             AL++ Y KC DV +A  +F E+   +D + W  II+   ++   E A+ L+ +M  + 
Sbjct: 282 SNALVDMYAKCSDVVAAKYIFCEMRR-KDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAG 340

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELA 450
            K    T V ++ AC+ VG   +G+ +   +++   +  +L    CL+ ++SR+  L+ A
Sbjct: 341 VKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEA 400

Query: 451 TRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
             +  +M    +  +W +++S+    G   +A  + + +    ++P+  +   LLS  + 
Sbjct: 401 ENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLD--LKPEDPSSYILLSNIYA 458

Query: 510 -HGSYQNVLTLLRGMQSL 526
             G ++NV +++R + ++
Sbjct: 459 GAGMWENV-SMVRKLMAV 475


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/638 (33%), Positives = 341/638 (53%), Gaps = 61/638 (9%)

Query: 499  TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
            +W   L        ++  ++    M   G RP+  +   VL+AV+ L+ LK G + H   
Sbjct: 59   SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118

Query: 559  LR---------------------NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            ++                      G+    +   +LM MY K   + +++ +F++  +R+
Sbjct: 119  VKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRD 178

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEA 652
            +V+WN++IS +     F  A      M  E ++ D V+  S++   S       G+   A
Sbjct: 179  MVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHA 238

Query: 653  LVIIHH--MKNSGIYPNVVT-------------------------WTSLISGSLQNENYR 685
             V+ ++  ++NS +   +V                          W ++ISG  +N    
Sbjct: 239  YVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDE 298

Query: 686  ESLKFFIQM-QQEDIKPNSTTMSSLLQTC-GGLGLLQNGKEIHCLCLKNGFIKDAYVATG 743
            ++L  FI+M +   + PN+TTM+S++  C   L  +  GKEIH   ++N    D  V + 
Sbjct: 299  KALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSA 358

Query: 744  LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETG--- 799
            L+DMY+K G L  +R VF +  NK + +WN +IM   ++G G+EA+ LF  ++ E G   
Sbjct: 359  LVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGG 418

Query: 800  -FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
              +P+ +TF  + AAC +SGL+ EG   F  M  D+ + PT +HY+C+VDLLG+AG L+E
Sbjct: 419  EAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEE 478

Query: 859  AWDFIRTMPFKPDAT-IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
            A++ + TMP + D    W +LLG+CRIH ++E  E+A++ L  LEP  +++Y L+ N+ +
Sbjct: 479  AYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYS 538

Query: 918  MSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVS 977
             +  W     +R +M ++GVK     SWI+    VH F A    HP + +++  L  L  
Sbjct: 539  SAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSE 598

Query: 978  EMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            +M+K GYVPDT CV  ++DE+EK  +L  H+EKLAI +G++ T     IRV KN RVC+D
Sbjct: 599  KMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 658

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH A K++S +  REI +RD  RFHHF+EG CSC D W
Sbjct: 659  CHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 232/539 (43%), Gaps = 76/539 (14%)

Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
           SRS A W   L    +   + +E +  + E+   G    +     +LK  + L     G 
Sbjct: 54  SRSTASWVDALRS-RTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 315 EVHASLIKRGFD----------FDVHLKC-----------ALMNFYGKCRDVESANKLFS 353
           ++HA+ +K G+            +++ KC           ALM  Y K   V+ +  LF 
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
              D  D + WN +I    +++++  A+  FR M     +    TI  +L AC+ +    
Sbjct: 173 SFVD-RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 414 EGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            GK+IH YVL++  L  N  V + L+ MY    ++E   RVFD +               
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHI--------------- 276

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPN 531
             LG               RI+     WN ++SG+  +G  +  L L   M +  G  PN
Sbjct: 277 --LG--------------RRIE----LWNAMISGYARNGLDEKALILFIEMIKVAGLLPN 316

Query: 532 GSSVSVVLQA-VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            ++++ V+ A V  L  +  G+E H Y +RN L  D+ VG++L+DMY K  CL  ++ VF
Sbjct: 317 TTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 376

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-----EIKPDLVSWNSLVSGYSI 645
           + M N+N++ WN LI      G    A ++   M  E     E KP+ V++ ++ +  S 
Sbjct: 377 NEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 436

Query: 646 WGQSKEALVIIHHMK-NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            G   E L + + MK + G+ P    +  ++    +     E+ +    M  E  K  + 
Sbjct: 437 SGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGA- 495

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG---LIDMYSKSGNLKSAREV 760
             SSLL  C     +    E+  +  KN    +  VA+    L ++YS +G    A EV
Sbjct: 496 -WSSLLGAC----RIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEV 549



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 21/169 (12%)

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
           +  +W   +    ++ ++RE++  +I+M     +P++    ++L+   GL  L+ G++IH
Sbjct: 56  STASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIH 115

Query: 727 CLCLKNGF--------------------IKD-AYVATGLIDMYSKSGNLKSAREVFRKSA 765
              +K G+                    I D  +    L+ MY+K G +  ++ +F    
Sbjct: 116 AAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFV 175

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           ++ + SWN MI  F+      EA+  F  ++  G + D +T  ++L AC
Sbjct: 176 DRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPAC 224


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Cucumis sativus]
          Length = 908

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 252/845 (29%), Positives = 402/845 (47%), Gaps = 108/845 (12%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+L T+     L   VHA  +K   + D+ L  AL++ Y K   V  A+K+FS +S   
Sbjct: 103  LLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSC-- 158

Query: 360  DDLLWNEIIMVKLRNEKWEN-AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
             +++    ++       WE+ A++LF  M  S  +    T V +L AC +   +  G Q+
Sbjct: 159  PNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQV 218

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            HG V+K  L S + +CN L+ +Y +                                G++
Sbjct: 219  HGIVVKLGLLSCVFICNALMGLYCK-------------------------------CGFL 247

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSV 537
            D+   LF +M     + DI +WN ++S       Y       RGMQ   G + +  S+S 
Sbjct: 248  DLVLRLFEEMP----ERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLST 303

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK----NDC----------- 582
            +L A         G++ H   L+ GL+  L V +SL+  Y K    ND            
Sbjct: 304  LLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRD 363

Query: 583  ----------------LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
                            L +A EVF+ M  RN +++N++++G         A ++  +M E
Sbjct: 364  VITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLE 423

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN------------------- 667
            E ++    +  S+++   +    K +  I   +   GI  N                   
Sbjct: 424  EGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMED 483

Query: 668  --------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS-SLLQT 712
                              TS+I G  +N    E++  F   Q E        MS S+L  
Sbjct: 484  AEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSL 543

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
            CG +G  + GK++HC  LK+G I +  V    + MYSK  N+  A  VF     + + SW
Sbjct: 544  CGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSW 603

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS--GLVEEGWKYFDSM 830
            N ++ G  ++  G +A+ ++ ++ + G +PD+ITF  +++A K++   LV+     F SM
Sbjct: 604  NGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSM 663

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
             T++NI PT+EHY+  + +LG+ G L+EA   IR MP +PD  +W ALL SCRI+ +   
Sbjct: 664  ETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERL 723

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             ++A+R +  +EP +  +Y L  NL + S RW   E++R  M E G +     SWI  + 
Sbjct: 724  EKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHEN 783

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             +H F A    HP   +IY  L  L+ E  K+GYVPDT  V Q+++E +K + L  H+ K
Sbjct: 784  KIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGK 843

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA  +G++ TK   PI+++KN R+C DCH   KY+S+V  R+I LRD + FH F +G+CS
Sbjct: 844  LAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCS 903

Query: 1071 CNDCW 1075
            C D W
Sbjct: 904  CTDYW 908



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 270/595 (45%), Gaps = 59/595 (9%)

Query: 160 HSHKPNSITNSP---TSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQ 216
           +S  P     SP    SL+ P   + +    LS I+S F  L  + ++      ++ HAQ
Sbjct: 63  NSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQ 122

Query: 217 MIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
            +K+      +D+    +LI  YL+ G    A K F      +   +++ +  +     E
Sbjct: 123 FLKL-----EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWE 177

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
             E +E++  +   G+         IL  C + M + LG +VH  ++K G    V +  A
Sbjct: 178 -DEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNA 236

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           LM  Y KC  ++   +LF E+ +  D   WN +I   ++  K++ A   FR MQ      
Sbjct: 237 LMGLYCKCGFLDLVLRLFEEMPE-RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLK 295

Query: 395 ISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           +   ++  +L ACA      +G+Q+H   LK  LES+LSV + LI  Y++       T +
Sbjct: 296 VDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDL 355

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F++M   ++ +W  MI+SY   G +D A  +FNKM     + + I++N +L+G   +   
Sbjct: 356 FETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMP----KRNCISYNAVLAGLSRNDDG 411

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              L L   M   G   +  +++ ++ A   L+  K  ++  G++++ G+  +  + T+L
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETAL 471

Query: 574 MDMYVKNDCLQNAQEVF--DNMKNRNIVAWNSLISGYCFKG-------LF---------- 614
           +DMY +   +++A+++F   +++N       S+I GY   G       LF          
Sbjct: 472 VDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIV 531

Query: 615 ---------------VNAKKMLNQMEEEEIKPDLVS----WNSLVSGYSIWGQSKEALVI 655
                          +   +M  QM    +K  L++     N+ VS YS      +A+ +
Sbjct: 532 MDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRV 591

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            + M       ++V+W  L++G + +    ++L  + +M++  IKP+S T + ++
Sbjct: 592 FNTMN----MQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALII 642



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 179/375 (47%), Gaps = 18/375 (4%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y+EFG   SA + F     R+   +++ L    S   +    LE++ E+  +GV  
Sbjct: 370 MITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGL-SRNDDGSRALELFIEMLEEGVEI 428

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               LT I+  C  L +F +  ++   ++K G   +  ++ AL++ Y +C  +E A K+F
Sbjct: 429 SDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIF 488

Query: 353 SEVSDLEDDL--LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI-VKMLQACAKV 409
            + S LE+D   +   +I    RN K   AI LF   Q   A  +   +   +L  C  +
Sbjct: 489 YQRS-LENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSI 547

Query: 410 GAFHE-GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           G FHE GKQ+H + LKS L +   V N  +SMYS+   ++ A RVF++M   ++ SWN +
Sbjct: 548 G-FHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGL 606

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG--HFTHGSYQNVLTLLRGMQSL 526
           ++ +      D A  ++ KM  + I+PD IT+  ++S   H       +  +L   M++ 
Sbjct: 607 VAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETE 666

Query: 527 -GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
              +P     +  +  +    LL+   E+   I    L+ D+YV  +L+     N C  N
Sbjct: 667 HNIKPTLEHYASFISVLGRWGLLE---EAEQTIRNMPLEPDVYVWRALL-----NSCRIN 718

Query: 586 AQEVFDNMKNRNIVA 600
             E  + +  RNI+A
Sbjct: 719 KNERLEKLAARNILA 733



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 169/389 (43%), Gaps = 68/389 (17%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           KG+      L+ +L  C   +    G ++HA  +K G +  + +  +L+ FY KC     
Sbjct: 292 KGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAND 351

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKL-------------------------------RNEK 376
              LF E   + D + W  +I   +                               RN+ 
Sbjct: 352 VTDLF-ETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDD 410

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
              A++LF EM     +    T+  ++ AC  + +F   +QI G+V+K  + SN  +   
Sbjct: 411 GSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETA 470

Query: 437 LISMYSRNNKLELATRVF--DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           L+ MY+R  ++E A ++F   S+++   +   SMI  Y   G ++ A SLF+   S    
Sbjct: 471 LVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSE--- 527

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
              I  + ++S         ++L+L     S+GF                    + G++ 
Sbjct: 528 -GAIVMDEVMS--------TSILSLC---GSIGFH-------------------EMGKQM 556

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H + L++GL  +  VG + + MY K   + +A  VF+ M  ++IV+WN L++G+      
Sbjct: 557 HCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQG 616

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             A  +  +ME+  IKPD +++  ++S Y
Sbjct: 617 DKALGIWKKMEKAGIKPDSITFALIISAY 645


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/558 (35%), Positives = 311/558 (55%), Gaps = 37/558 (6%)

Query: 555  HGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H   LR+GL   D Y  ++L+ MY       +A+  FD + + N V   ++ SGY    L
Sbjct: 116  HLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNL 175

Query: 614  FVNAKKMLNQM--------EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
              ++ ++   M         +E       S ++ V    +       +  I   +N+G+ 
Sbjct: 176  VYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVV 235

Query: 666  --------------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQ--E 697
                                       +VV+W S+I+   QN    E++  + +M     
Sbjct: 236  NTMLDSYAKGGSRDLEVARKVFDTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGG 295

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             IK N+  +S++L  C   G +Q GK IH   ++ G  ++ YV T ++DMYSK G ++ A
Sbjct: 296  GIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMA 355

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
               FRK   K + SW+ MI G+ ++G G+EA+ +F E+  +G +P+ ITF ++LAAC ++
Sbjct: 356  SRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHA 415

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GL++EG  ++++M  ++ I   +EHY CMVDLLG+AG LDEA+  I+ M  KPDA IWGA
Sbjct: 416  GLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGA 475

Query: 878  LLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGV 937
            LL +CRIH ++E AE++ +RLF+L+  NS  Y L+ N+ A +  W+DVER+R  +    +
Sbjct: 476  LLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRI 535

Query: 938  KSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDE 997
            +    +S  ++   +++F      HP   EIY  L  L+  M++ GYVP+T  V  D+DE
Sbjct: 536  EKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDE 595

Query: 998  EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            EEK   L  H+EKLA+ + LM +  R+ I +IKN RVCSDCHTA K+++ +  REI +RD
Sbjct: 596  EEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRD 655

Query: 1058 GARFHHFREGECSCNDCW 1075
              RFHHF++G CSC D W
Sbjct: 656  LQRFHHFKDGLCSCRDYW 673



 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 183/405 (45%), Gaps = 44/405 (10%)

Query: 315 EVHASLIKRG-FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           ++H   ++ G F  D +   AL++ Y  C     A + F E+ D  + ++   +    +R
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPD-PNPVIVTAMASGYVR 172

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKML--QACAKVGAFHEGKQIHGYVLKSALESNL 431
           N    ++++LFR M  S + ++      ++   A A+V        +H  + K   E N 
Sbjct: 173 NNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNA 232

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
            V N ++  Y++    +L                             +VA  +F+ M   
Sbjct: 233 GVVNTMLDSYAKGGSRDL-----------------------------EVARKVFDTM--- 260

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG--FRPNGSSVSVVLQAVTELRLLK 549
             + D+++WN +++ +  +G     + L   M ++G   + N  ++S VL A      ++
Sbjct: 261 --ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQ 318

Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
            G+  H  ++R GL+ ++YVGTS++DMY K   ++ A   F  +K +NI++W+++I+GY 
Sbjct: 319 TGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYG 378

Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNV 668
             G    A ++  +M+   ++P+ +++ S+++  S  G   E     + MK   GI   V
Sbjct: 379 MHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGV 438

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +  ++    +     E+     +M+   +KP++    +LL  C
Sbjct: 439 EHYGCMVDLLGRAGCLDEAYSLIKEMK---VKPDAAIWGALLSAC 480



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 176/397 (44%), Gaps = 28/397 (7%)

Query: 417 QIHGYVLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           Q+H   L+S L  S+    + L+ MY   ++   A R FD + D N     +M S Y   
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY---QNVLTLLRGM-QSLGFRPN 531
             V  +  LF  M +S     +     L++  F+  +    + V   L  +   +GF  N
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVA--FSASARVPDRGVTASLHALIAKIGFERN 231

Query: 532 GSSVSVVLQAVTE--LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
              V+ +L +  +   R L+  R+     + + ++ D+    S++ +Y +N     A  +
Sbjct: 232 AGVVNTMLDSYAKGGSRDLEVARK-----VFDTMERDVVSWNSMIALYAQNGMSAEAIGL 286

Query: 590 FDNMKNR------NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
           +  M N       N VA ++++      G     K++ NQ+    ++ ++    S+V  Y
Sbjct: 287 YSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMY 346

Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
           S  G+ + A      +K      N+++W+++I+G   +   +E+L+ F +M++  ++PN 
Sbjct: 347 SKCGRVEMASRAFRKIKEK----NILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNY 402

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVF 761
            T  S+L  C   GLL  G+  +   +K  F  +A V     ++D+  ++G L  A  + 
Sbjct: 403 ITFISVLAACSHAGLLDEGRYWYN-AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLI 461

Query: 762 RKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLE 797
           ++   K  A+ W  ++    I+ N + A +    L E
Sbjct: 462 KEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 498



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 132/307 (42%), Gaps = 49/307 (15%)

Query: 212 SKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFT-SAAKAFFLYFSRSYADWSSFLEDYES 270
           S HA + K+G   N+  +V +++  Y + G      A+  F    R    W+S +  Y  
Sbjct: 218 SLHALIAKIGFERNAG-VVNTMLDSYAKGGSRDLEVARKVFDTMERDVVSWNSMIALYAQ 276

Query: 271 FG------GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
            G      G   ++L V     G G+   +  L+ +L  C    A   G  +H  +++ G
Sbjct: 277 NGMSAEAIGLYSKMLNV-----GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMG 331

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
            + +V++  ++++ Y KC  VE A++ F ++ + ++ L W+ +I     + + + A+++F
Sbjct: 332 LEENVYVGTSIVDMYSKCGRVEMASRAFRKIKE-KNILSWSAMITGYGMHGRGQEALEIF 390

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSR 443
            EM+ S  +    T + +L AC+  G   EG+  +  + +   +E+ +    C++ +  R
Sbjct: 391 TEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGR 450

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
                                           G +D A+SL  +M   +++PD   W  L
Sbjct: 451 A-------------------------------GCLDEAYSLIKEM---KVKPDAAIWGAL 476

Query: 504 LSGHFTH 510
           LS    H
Sbjct: 477 LSACRIH 483


>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/602 (34%), Positives = 328/602 (54%), Gaps = 34/602 (5%)

Query: 478  VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL---TLLRGMQSLGF-RPNGS 533
            +D A  +FN+M     Q +  +WN ++ G F+       L   TL   M S  F  PN  
Sbjct: 75   LDYAHKIFNQMP----QRNCFSWNTIIRG-FSESDEDKALIAITLFYEMMSDEFVEPNRF 129

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            +   VL+A  +   ++ G++ HG  L+ G   D +V ++L+ MYV    +++A+ +F   
Sbjct: 130  TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF--- 186

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
              +NI+                  K M+   +  +   ++V WN ++ GY   G  K A 
Sbjct: 187  -YKNIIE-----------------KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAAR 228

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            ++   M+      +VV+W ++ISG   N  ++++++ F +M++ DI+PN  T+ S+L   
Sbjct: 229  MLFDKMRQR----SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAI 284

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              LG L+ G+ +H     +G   D  + + LIDMYSK G ++ A  VF +   + + +W+
Sbjct: 285  SRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWS 344

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             MI GFAI+G   +AI  F ++ + G +P  + +  LL AC + GLVEEG +YF  M + 
Sbjct: 345  AMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSV 404

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
              + P IEHY CMVDLLG++G LDEA +FI  MP KPD  IW ALLG+CR+ G++E  + 
Sbjct: 405  DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKR 464

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
             +  L  + P +S  Y  + N+ A    W +V  +R  M E  ++     S I ID ++H
Sbjct: 465  VANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLH 524

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             F  E   HP   EI   L  +  +++  GY P T  V  +++EE+K  VL  H+EK+A 
Sbjct: 525  EFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIAT 584

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             +GL+ T    PIR++KN R+C DCH++ K +S V  R+I +RD  RFHHF++G CSC D
Sbjct: 585  AFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMD 644

Query: 1074 CW 1075
             W
Sbjct: 645  YW 646



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 222/477 (46%), Gaps = 31/477 (6%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKC----RDVESANKLFSEVSDLEDDLLWNEII-- 368
           ++HA  IK G   D      ++ F        RD++ A+K+F+++    +   WN II  
Sbjct: 41  QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ-RNCFSWNTIIRG 99

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
             +   +K   AI LF EM        +R T   +L+ACAK G   EGKQIHG  LK   
Sbjct: 100 FSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVF--------------DSMKDHNLSSWNSMISSYT 473
             +  V + L+ MY     ++ A  +F                 +D  +  WN MI  Y 
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
            LG    A  LF+KM     Q  +++WN ++SG+  +G +++ + + R M+    RPN  
Sbjct: 220 RLGDCKAARMLFDKMR----QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           ++  VL A++ L  L+ G   H Y   +G+  D  +G++L+DMY K   ++ A  VF+ +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
              N++ W+++I+G+   G   +A     +M +  ++P  V++ +L++  S  G  +E  
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395

Query: 654 VIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                M +  G+ P +  +  ++    ++    E+ +F + M    IKP+     +LL  
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIWKALLGA 452

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
           C   G ++ GK +  + L +    D+     L +MY+  GN     E+  +   K +
Sbjct: 453 CRMQGNVEMGKRVANI-LMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 131/617 (21%), Positives = 245/617 (39%), Gaps = 82/617 (13%)

Query: 170 SPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDM 229
           +PT     P       +  S  SS F  +N     R LS +   HA  IK G++   D +
Sbjct: 2   NPTQTLFSPGGNSPASSPASHPSSLFPQINNCRTIRDLSQI---HAVFIKSGQM--RDTL 56

Query: 230 VKSLIFHY-----LEFGDFTSAAKAFFLYFSRSYADWSSFLEDY-ESFGGEVQELLEVWG 283
             + I  +     L   D   A K F     R+   W++ +  + ES   +    + ++ 
Sbjct: 57  AAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFY 116

Query: 284 ELHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
           E+     +  +R     +LK C K      G ++H   +K GF  D  +   L+  Y  C
Sbjct: 117 EMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC 176

Query: 343 RDVESANKLFSEVSDLEDDL--------------LWNEIIMVKLR--------------- 373
             ++ A  LF + + +E D+              LWN +I   +R               
Sbjct: 177 GFMKDARVLFYK-NIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMR 235

Query: 374 ----------------NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
                           N  +++A+++FREM+    +    T+V +L A +++G+   G+ 
Sbjct: 236 QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEW 295

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +H Y   S +  +  + + LI MYS+   +E A  VF+ +   N+ +W++MI+ +   G 
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQ 355

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVS 536
              A   F KM  + ++P  + +  LL+     G  +        M S+ G  P      
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG 415

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD---MYVKNDCLQNAQEVFDNM 593
            ++  +    LL    E+  +IL   +  D  +  +L+    M    +  +    +  +M
Sbjct: 416 CMVDLLGRSGLLD---EAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM 472

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----LVSWNSLVSGYSIWGQS 649
              +  A+ +L + Y  +G +    +M  +M+E++I+ D    L+  + ++  + +   S
Sbjct: 473 VPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDS 532

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE-SLKFFIQMQQEDIKPNSTTMSS 708
                   H K   I   +V     IS  L+   YR  + +  + +++ED +      S 
Sbjct: 533 --------HPKAKEINSMLVE----ISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSE 580

Query: 709 LLQTCGGLGLLQNGKEI 725
            + T  GL     GK I
Sbjct: 581 KIATAFGLISTSPGKPI 597



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 7/112 (6%)

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG----NLKSAREVFRKSANKTLASWNC 774
           +++  +IH + +K+G ++D   A  ++   + S     +L  A ++F +   +   SWN 
Sbjct: 36  IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95

Query: 775 MIMGFAIYGNGKE--AILLFHELLETGF-QPDAITFTALLAACKNSGLVEEG 823
           +I GF+     K   AI LF+E++   F +P+  TF ++L AC  +G ++EG
Sbjct: 96  IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147


>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
 gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
          Length = 609

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/587 (35%), Positives = 317/587 (54%), Gaps = 44/587 (7%)

Query: 494  QPDIITWNCLLSG-HFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYG 551
            QPD+  +N ++    F+  S  +  T  R + +     PN  S +   +       +  G
Sbjct: 62   QPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEG 121

Query: 552  RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
             +   + ++ GL+ +L+V  +L+ MYV  D + +A++VFD   NR               
Sbjct: 122  EQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNR--------------- 166

Query: 612  GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
                                D+ SWN ++SGY+  G+  EA  +   M       +VV+W
Sbjct: 167  --------------------DMYSWNIMLSGYARLGKMDEARQLFDEMPEK----DVVSW 202

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            T++ISG LQ   + E+L  F  M  + + PN  T++S L  C  L  L  G+ +H    K
Sbjct: 203  TTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKK 262

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA--NKTLASWNCMIMGFAIYGNGKEAI 789
            N    +  +  GLIDMY+K G L+ A ++F  +    + +  WN MI GFA++G  KEAI
Sbjct: 263  NNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAI 322

Query: 790  LLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
             +F ++      P+ +TF ALL AC +   VEEG  YF+SM++ Y + P +EHY C+VDL
Sbjct: 323  EVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDL 382

Query: 850  LGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANY 909
            LG+AG L EA + I +M   PD  IWGALL +C+IH   E  E   + + +L+P +   +
Sbjct: 383  LGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCH 442

Query: 910  NLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIY 969
             L+ N+ +++  W +   LR  + E G K     S I+++ + H F      HP T ++Y
Sbjct: 443  VLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLY 502

Query: 970  FELYHLVSEMKKLGYVPDTRCVYQDIDE-EEKGKVLLSHTEKLAIVYGLMKTKSRAPIRV 1028
              L  +++++K  GY+P++  V  DID+ E++   LL H+EKLAI +GLM T  + PIR+
Sbjct: 503  LFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRI 562

Query: 1029 IKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            +KN RVCSDCH A K++S V  REI +RD  R+HHF++G CSCND W
Sbjct: 563  VKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDGTCSCNDYW 609



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 171/366 (46%), Gaps = 11/366 (3%)

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            + C       EG+Q+  + +K  LE+NL V N LI MY   + +  A +VFD   + ++
Sbjct: 109 FKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDM 168

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
            SWN M+S Y  LG +D A  LF++M     + D+++W  ++SG    G +   L +   
Sbjct: 169 YSWNIMLSGYARLGKMDEARQLFDEMP----EKDVVSWTTMISGCLQVGYFMEALDIFHN 224

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M + G  PN  +++  L A   L  L  GR  H YI +N +  +  +   L+DMY K   
Sbjct: 225 MLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGE 284

Query: 583 LQNAQEVFDNMK--NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
           L+ A ++F++     R +  WN++I G+   G    A ++  QM+ E++ P+ V++ +L+
Sbjct: 285 LEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALL 344

Query: 641 SGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
           +  S   + +E       M +   + P +  +  L+    +    +E+ +    M    +
Sbjct: 345 NACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMH---L 401

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            P+     +LL  C      + G+ +  + +K            L ++YS +GN   AR 
Sbjct: 402 TPDVAIWGALLSACKIHKDAEMGERVGKI-VKELDPNHLGCHVLLANIYSLTGNWNEART 460

Query: 760 VFRKSA 765
           +  K A
Sbjct: 461 LREKIA 466



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 4/180 (2%)

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           +++ Y +   ++ A +LF E+ + +D + W  +I   L+   +  A+ +F  M       
Sbjct: 174 MLSGYARLGKMDEARQLFDEMPE-KDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSP 232

Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
              T+   L ACA + A  +G+ +H Y+ K+ ++ N  +   LI MY++  +LE A+++F
Sbjct: 233 NEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLF 292

Query: 455 DSMK--DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           +S       +  WN+MI  +   G    A  +F +M   ++ P+ +T+  LL+   +HG+
Sbjct: 293 NSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNA-CSHGN 351



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 12/242 (4%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
           Y   G    A + F     +    W++ +      G    E L+++  +  KG+      
Sbjct: 178 YARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVG-YFMEALDIFHNMLAKGMSPNEYT 236

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L   L  C  L+A   G  +H  + K     +  L   L++ Y KC ++E A+KLF+   
Sbjct: 237 LASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNP 296

Query: 357 DLEDDL-LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            L+  +  WN +I     + K + AI++F +M+         T V +L AC+      EG
Sbjct: 297 RLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEG 356

Query: 416 K-----QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
           +         Y +K  LE       CL+ +  R  +L+ A  +  SM    +++ W +++
Sbjct: 357 RYYFESMASHYRVKPELEHY----GCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALL 412

Query: 470 SS 471
           S+
Sbjct: 413 SA 414


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/502 (37%), Positives = 300/502 (59%), Gaps = 31/502 (6%)

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL--- 639
            L + ++VF+ M  R+IV+WN++ISG    G+  +A  M+ +M   +++PD  + +S+   
Sbjct: 146  LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205

Query: 640  ------------VSGYSIW-GQSKEALV----IIHHMKNSGIYPNV-----------VTW 671
                        + GY+I  G   +  +    I  + K + +  +            ++W
Sbjct: 206  FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 265

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             S+I+G +QN  + E LKFF QM    IKPN  + SS++  C  L  L  GK++H   ++
Sbjct: 266  NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 325

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            + F  + ++A+ L+DMY+K GN+++AR +F K     + SW  MIMG+A++G+  +AI L
Sbjct: 326  SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 385

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F  +   G +P+ + F A+L AC ++GLV+E WKYF+SM+ DY IIP +EHY+ + DLLG
Sbjct: 386  FKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG 445

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            + G L+EA++FI  M  +P  ++W  LL +CR+H ++E AE  S++LF ++P N   Y L
Sbjct: 446  RVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVL 505

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ + + RW+D  +LR +M + G+K     SWI+I   VH F A    HP    I   
Sbjct: 506  LSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEA 565

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            L  L+ +M++ GYV DT  V  D++EE+K  +L SH+E+LAI +G++ T +   IRV KN
Sbjct: 566  LKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKN 625

Query: 1032 TRVCSDCHTAAKYMSLVRGREI 1053
             RVC DCHTA K++S + GREI
Sbjct: 626  LRVCVDCHTATKFISKIVGREI 647



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 211/453 (46%), Gaps = 56/453 (12%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           V  +  +   G   DV+ K    ++Y     + S  K+F E+    D + WN +I    +
Sbjct: 120 VNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVF-EMMPKRDIVSWNTVISGNAQ 173

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N   E+A+ + REM  +  +  S T+  +L   A+     +GK+IHGY +++  ++++ +
Sbjct: 174 NGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFI 233

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            + LI MY++  +++ + RVF  +  H                                 
Sbjct: 234 GSSLIDMYAKCTRVDDSCRVFYMLPQH--------------------------------- 260

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
             D I+WN +++G   +G +   L   + M     +PN  S S ++ A   L  L  G++
Sbjct: 261 --DGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 318

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HGYI+R+  D ++++ ++L+DMY K   ++ A+ +FD M+  ++V+W ++I GY   G 
Sbjct: 319 LHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGH 378

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWT 672
             +A  +  +ME E +KP+ V++ ++++  S  G   EA    + M ++  I P +  + 
Sbjct: 379 AYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYA 438

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           ++     +     E+ +F   M    I+P  +  S+LL  C     +    E+     K 
Sbjct: 439 AVADLLGRVGRLEEAYEFISDMH---IEPTGSVWSTLLAAC----RVHKNIELAEKVSKK 491

Query: 733 GFIKD-----AYVATGLIDMYSKSGNLKSAREV 760
            F  D     AYV   L ++YS +G  K AR++
Sbjct: 492 LFTVDPQNIGAYVL--LSNIYSAAGRWKDARKL 522



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 60/375 (16%)

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           +VFD  K  ++ S     S Y G            K+     + DI++WN ++SG+  +G
Sbjct: 125 KVFDEGKTSDVYSKKEKESYYLGS---------LRKVFEMMPKRDIVSWNTVISGNAQNG 175

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
            +++ L ++R M +   RP+  ++S VL    E   L  G+E HGY +RNG D D+++G+
Sbjct: 176 MHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGS 235

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           SL+DMY K   + ++  VF  +   + ++WNS+I+G    G+F    K   QM   +IKP
Sbjct: 236 SLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKP 295

Query: 632 DLVSWNS-----------------------------------LVSGYSIWGQSKEALVII 656
           + VS++S                                   LV  Y+  G  + A  I 
Sbjct: 296 NHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIF 355

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
             M+   +Y ++V+WT++I G   + +  +++  F +M+ E +KPN     ++L  C   
Sbjct: 356 DKME---LY-DMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHA 411

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGL------IDMYSKSGNLKSAREVFRK-SANKTL 769
           GL+    +       N   +D  +  GL       D+  + G L+ A E         T 
Sbjct: 412 GLVDEAWKYF-----NSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTG 466

Query: 770 ASWNCMIMGFAIYGN 784
           + W+ ++    ++ N
Sbjct: 467 SVWSTLLAACRVHKN 481



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 132/262 (50%), Gaps = 2/262 (0%)

Query: 245 SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
           S  K F +   R    W++ +      G     L+ V  E+    +   S  L+ +L + 
Sbjct: 148 SLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV-REMGNADLRPDSFTLSSVLPIF 206

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
            + +    G E+H   I+ G+D DV +  +L++ Y KC  V+ + ++F  +    D + W
Sbjct: 207 AEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQ-HDGISW 265

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N II   ++N  ++  +K F++M  +  K    +   ++ ACA +   H GKQ+HGY+++
Sbjct: 266 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 325

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           S  + N+ + + L+ MY++   +  A  +FD M+ +++ SW +MI  Y   G+   A SL
Sbjct: 326 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 385

Query: 485 FNKMNSSRIQPDIITWNCLLSG 506
           F +M    ++P+ + +  +L+ 
Sbjct: 386 FKRMEVEGVKPNYVAFMAVLTA 407



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 151/358 (42%), Gaps = 20/358 (5%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           K  H   I+ G  +++D  +  SLI  Y +      + + F++        W+S +    
Sbjct: 216 KEIHGYAIRNG--YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV 273

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G   E L+ + ++    +       + I+  C  L    LG ++H  +I+  FD +V
Sbjct: 274 Q-NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNV 332

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  AL++ Y KC ++ +A  +F ++ +L D + W  +IM    +    +AI LF+ M+ 
Sbjct: 333 FIASALVDMYAKCGNIRTARWIFDKM-ELYDMVSWTAMIMGYALHGHAYDAISLFKRMEV 391

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRN 444
              K      + +L AC+  G   E           Y +   LE   +V + L     R 
Sbjct: 392 EGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLL----GRV 447

Query: 445 NKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
            +LE A      M  +   S W++++++      +++A  +  K+ +  + P  I    L
Sbjct: 448 GRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFT--VDPQNIGAYVL 505

Query: 504 LSGHFT-HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
           LS  ++  G +++   L   M+  G +   +   + ++   ++     G +SH Y  R
Sbjct: 506 LSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIK--NKVHAFVAGDKSHPYYDR 561



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 92/436 (21%), Positives = 174/436 (39%), Gaps = 73/436 (16%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M + G  P+ +    VL++ T ++ L++G   HG I+R G+ +DLY   +LM+MY K   
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60

Query: 583 LQNA--QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
           L+    Q   D+     I     +  G C      N+  +  +++E             V
Sbjct: 61  LEEGGVQRFCDSKMLGGIPEPREI--GKC-----SNSHDLPCELDER------------V 101

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESL-KFFIQMQQEDI 699
           +G    G   +   I++ +       +    + + S   +   Y  SL K F  M + DI
Sbjct: 102 AGIDQNGDLNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDI 161

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
              +T +S   Q       L   +E+    L+     D++  + ++ ++++  NL   +E
Sbjct: 162 VSWNTVISGNAQNGMHEDALMMVREMGNADLR----PDSFTLSSVLPIFAEYVNLLKGKE 217

Query: 760 V----FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
           +     R   +  +   + +I  +A      ++  +F+ L     Q D I++ +++A C 
Sbjct: 218 IHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP----QHDGISWNSIIAGCV 273

Query: 816 NSGLVEEGWKYFDSM---------STDYNIIPTIEHY----------------------- 843
            +G+ +EG K+F  M          +  +I+P   H                        
Sbjct: 274 QNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVF 333

Query: 844 --SCMVDLLGKAGYLDEA-WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
             S +VD+  K G +  A W F +   +  D   W A++    +HGH  Y  I+  +  +
Sbjct: 334 IASALVDMYAKCGNIRTARWIFDKMELY--DMVSWTAMIMGYALHGH-AYDAISLFKRME 390

Query: 901 LEPCNSANYNLMMNLL 916
           +E     NY   M +L
Sbjct: 391 VEGVK-PNYVAFMAVL 405


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Glycine max]
          Length = 754

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/717 (29%), Positives = 369/717 (51%), Gaps = 78/717 (10%)

Query: 400  VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
            V +LQ C    ++   + +HG+V+K+    N  V + L+++Y++   +E A RVF++M  
Sbjct: 68   VPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPR 127

Query: 460  HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
             N                                   ++ W  L+ G   +   ++ + +
Sbjct: 128  RN-----------------------------------VVAWTTLMVGFVQNSQPKHAIHV 152

Query: 520  LRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK 579
             + M   G  P+  ++S VL A + L+ LK G + H YI++  LD+D  VG++L  +Y K
Sbjct: 153  FQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSK 212

Query: 580  NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
               L++A + F  ++ +N+++W S +S     G  V   ++  +M  E+IKP+  +  S 
Sbjct: 213  CGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSA 272

Query: 640  VS---------------------GYSIWGQSKEALVII----------HHMKNSGIYPNV 668
            +S                     GY    + + +L+ +          H   N     ++
Sbjct: 273  LSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSM 332

Query: 669  VTWTSLISGSLQN-----------ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            VTW ++I+G  Q            +   E+LK F ++ Q  +KP+  T+SS+L  C  + 
Sbjct: 333  VTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRML 392

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
             ++ G++IH   +K GF+ D  V+T LI MY+K G+++ A + F + + +T+ +W  MI 
Sbjct: 393  AIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMIT 452

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
            GF+ +G  ++A+ +F ++   G +P+ +TF  +L+AC ++G+V +   YF+ M   Y I 
Sbjct: 453  GFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIK 512

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
            P ++HY CMVD+  + G L++A +FI+ M ++P   IW   +  CR HG+LE    AS +
Sbjct: 513  PVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQ 572

Query: 898  LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
            L  L+P +   Y L++N+   ++R++DV R+R  M+   V  +  WSWI I   V+ F  
Sbjct: 573  LLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKT 632

Query: 958  EGAPHPATGEIYFELYHLVSEMKKLGY-VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
                HP +  I   L  L+++ K LGY + ++  +  + +EE+     + H+EKLAI +G
Sbjct: 633  NDKTHPPSSLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYHSEKLAITFG 692

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            L    + +PIRV+K+T +C D H   K +S + GREI ++D  R H F  GECSC +
Sbjct: 693  LENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNGECSCGN 749



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/559 (23%), Positives = 238/559 (42%), Gaps = 60/559 (10%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSS 263
           R  S  +  H  ++K G   + +  V S + + Y + G+   A + F     R+   W++
Sbjct: 78  RSYSGTQIVHGHVMKTG--CHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTT 135

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +  +     + +  + V+ E+   G       L+ +L  C+ L +  LG + HA +IK 
Sbjct: 136 LMVGFVQ-NSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKY 194

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
             DFD  +  AL + Y KC  +E A K FS + + ++ + W   +     N      ++L
Sbjct: 195 HLDFDTSVGSALCSLYSKCGRLEDALKAFSRIRE-KNVISWTSAVSACGDNGAPVKGLRL 253

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F EM     K    T+   L  C ++ +   G Q+    +K   ESNL V N L+ +Y +
Sbjct: 254 FVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLK 313

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV-----------DVAWSLFNKMNSSR 492
           +  +  A R F+ M D ++ +WN+MI+ +  +  +             A  +F+K+N S 
Sbjct: 314 SGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSG 373

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++PD+ T                                   +S VL   + +  ++ G 
Sbjct: 374 MKPDLFT-----------------------------------LSSVLSVCSRMLAIEQGE 398

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           + H   ++ G   D+ V TSL+ MY K   ++ A + F  M  R ++AW S+I+G+   G
Sbjct: 399 QIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHG 458

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
           +   A  +   M    ++P+ V++  ++S  S  G   +AL     M K   I P +  +
Sbjct: 459 MSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHY 518

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG--KEIHCLC 729
             ++   ++     ++L F  +M  E   P+    S+ +  C   G L+ G       L 
Sbjct: 519 ECMVDMFVRLGRLEQALNFIKKMNYE---PSEFIWSNFIAGCRSHGNLELGFYASEQLLS 575

Query: 730 LKNGFIKDAYVATGLIDMY 748
           LK    KD      L++MY
Sbjct: 576 LKP---KDPETYVLLLNMY 591


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/581 (34%), Positives = 311/581 (53%), Gaps = 40/581 (6%)

Query: 530  PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
            P        + A  + + L   R+ HG++  +  + D ++  SL+ +Y K   +  A +V
Sbjct: 49   PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 590  FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG------- 642
            FD M+ +++V+W SLI+GY    +   A  +L  M +   KP+  ++ SL+         
Sbjct: 109  FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 643  ----------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                                        Y+  G+   A  +   + +     N V+W +L
Sbjct: 169  GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK----NGVSWNAL 224

Query: 675  ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
            ISG  +  +   +L  F +MQ+   +    T SS+     G+G L+ GK +H   +K+  
Sbjct: 225  ISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQ 284

Query: 735  IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
               A+V   ++DMY+KSG++  AR+VF +  NK L +WN M+  FA YG GKEA+  F E
Sbjct: 285  KLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEE 344

Query: 795  LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
            + ++G   + ITF  +L AC + GLV+EG  YFD M  +YN+ P IEHY  +VDLLG+AG
Sbjct: 345  MRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAG 403

Query: 855  YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
             L+ A  FI  MP +P A +WGALL +CR+H + +  + A+  +F+L+P +S    L+ N
Sbjct: 404  LLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYN 463

Query: 915  LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
            + A +  W+   R+R  M   GVK     SW++I   VH+F A    HP   EIY     
Sbjct: 464  IYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDE 523

Query: 975  LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
            +  +++K GYVPD   V   +DE+E+   L  H+EK+A+ + L++  + A IR++KN R+
Sbjct: 524  ISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRI 583

Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            C DCH+A KY+S V  REI +RD  RFHHF  G CSC D W
Sbjct: 584  CGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 186/421 (44%), Gaps = 43/421 (10%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R+    +  C +        ++H  L    F+ D  L  +L++ Y KC  V  A+K+F +
Sbjct: 52  RVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDK 111

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           +   +D + W  +I    +N+    AI L   M     K    T   +L+A         
Sbjct: 112 MRK-KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGI 170

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G QIH   +K     ++ V + L+ MY+R  K+++AT VFD +   N  SWN++IS +  
Sbjct: 171 GGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFAR 230

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
            G  + A  +F +M  +  +              TH +Y ++ + L G+ +         
Sbjct: 231 KGDGETALMVFAEMQRNGFEA-------------THFTYSSIFSGLAGIGA--------- 268

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
                        L+ G+  H +++++      +VG +++DMY K+  + +A++VF+ + 
Sbjct: 269 -------------LEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVL 315

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
           N+++V WNS+++ +   GL   A     +M +  I  + +++  +++  S  G  KE   
Sbjct: 316 NKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKH 375

Query: 655 IIHHMKNSGIYPNVVTWTSLIS--GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
               +K   + P +  + +++   G     NY  +L F  +M  E   P +    +LL  
Sbjct: 376 YFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNY--ALVFIFKMPME---PTAAVWGALLAA 430

Query: 713 C 713
           C
Sbjct: 431 C 431



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/422 (22%), Positives = 176/422 (41%), Gaps = 67/422 (15%)

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
           R     + ACA+     + ++IHG++  S  E +  + N LI +Y +             
Sbjct: 52  RVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK------------- 98

Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
                              G V  A  +F+KM     + D+++W  L++G+  +      
Sbjct: 99  ------------------CGSVVEAHKVFDKMR----KKDMVSWTSLIAGYAQNDMPAEA 136

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           + LL GM    F+PNG + + +L+A         G + H   ++     D+YVG++L+DM
Sbjct: 137 IGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDM 196

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
           Y +   +  A  VFD + ++N V+WN+LISG+  KG    A  +  +M+    +    ++
Sbjct: 197 YARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTY 256

Query: 637 NSLVSGYSIWGQSKEALVIIHHMKNSG-------------------------------IY 665
           +S+ SG +  G  ++   +  HM  S                                + 
Sbjct: 257 SSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLN 316

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            ++VTW S+++   Q    +E++  F +M++  I  N  T   +L  C   GL++ GK  
Sbjct: 317 KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHY 376

Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGN 784
             +  +     +      ++D+  ++G L  A   +F+     T A W  ++    ++ N
Sbjct: 377 FDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKN 436

Query: 785 GK 786
            K
Sbjct: 437 AK 438



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 11/284 (3%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK--- 288
           SLI  Y + G    A K F     +    W+S +  Y       + +  + G L G+   
Sbjct: 91  SLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKP 150

Query: 289 -GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
            G  F S     +LK         +G ++HA  +K  +  DV++  AL++ Y +C  ++ 
Sbjct: 151 NGFTFAS-----LLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDM 205

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
           A  +F ++ D ++ + WN +I    R    E A+ +F EMQ +  +A   T   +    A
Sbjct: 206 ATAVFDKL-DSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLA 264

Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
            +GA  +GK +H +++KS  +    V N ++ MY+++  +  A +VF+ + + +L +WNS
Sbjct: 265 GIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNS 324

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           M++++   G    A S F +M  S I  + IT+ C+L+   +HG
Sbjct: 325 MLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTA-CSHG 367



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 8/202 (3%)

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
            +   ++ P      + +  C     L + ++IH     + F  DA++   LI +Y K G
Sbjct: 41  HLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCG 100

Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           ++  A +VF K   K + SW  +I G+A      EAI L   +L+  F+P+  TF +LL 
Sbjct: 101 SVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLK 160

Query: 813 AC---KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           A     +SG+   G  +  ++  D++    +   S ++D+  + G +D A      +  K
Sbjct: 161 AAGAYADSGI--GGQIHALAVKCDWH--EDVYVGSALLDMYARCGKMDMATAVFDKLDSK 216

Query: 870 PDATIWGALLGSCRIHGHLEYA 891
            +   W AL+      G  E A
Sbjct: 217 -NGVSWNALISGFARKGDGETA 237



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 6/251 (2%)

Query: 224 WNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW 282
           W+ D  V S L+  Y   G    A   F    S++   W++ +  +    G+ +  L V+
Sbjct: 183 WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFAR-KGDGETALMVF 241

Query: 283 GELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
            E+   G        + I      + A   G  VHA ++K        +   +++ Y K 
Sbjct: 242 AEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKS 301

Query: 343 RDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVK 401
             +  A K+F  V  L  DL+ WN ++    +    + A+  F EM+ S       T + 
Sbjct: 302 GSMIDARKVFERV--LNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLC 359

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA-TRVFDSMKDH 460
           +L AC+  G   EGK     + +  LE  +     ++ +  R   L  A   +F    + 
Sbjct: 360 ILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEP 419

Query: 461 NLSSWNSMISS 471
             + W +++++
Sbjct: 420 TAAVWGALLAA 430


>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
 gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/671 (33%), Positives = 339/671 (50%), Gaps = 90/671 (13%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL-----ATRVFDSMKDHNLSSWNSMIS 470
            KQIHG+VL+  L+ +   C  L  +     KL +     A RV + ++  N   W ++I 
Sbjct: 66   KQIHGHVLRKGLDQS---CYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIR 122

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
             Y   G  D A +++  M    I P   T+                              
Sbjct: 123  GYAIEGKFDEAIAMYGCMRKEEITPVSFTF------------------------------ 152

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILR-NGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
                 S +L+A   ++ L  GR+ H    R  G  + +YVG +++DMYVK + +  A++V
Sbjct: 153  -----SALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKV 206

Query: 590  FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
            FD M  R++++W  LI+ Y   G    A ++   +  +    D+V+W ++V+G++   + 
Sbjct: 207  FDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKP 262

Query: 650  KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
            +EAL     M+ SGI  + VT    IS                                 
Sbjct: 263  QEALEYFDRMEKSGIRADEVTVAGYISA-------------------------------- 290

Query: 710  LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG--LIDMYSKSGNLKSAREVFRKSANK 767
               C  LG  +       +  K+G+    +V  G  LIDMYSK GN++ A  VF    NK
Sbjct: 291  ---CAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347

Query: 768  TLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQPDAITFTALLAACKNSGLVEEGWKY 826
             + +++ MI+G A +G  +EA+ LFH ++ +T  +P+ +TF   L AC +SGLV++G + 
Sbjct: 348  NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407

Query: 827  FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            FDSM   + + PT +HY+CMVDLLG+ G L EA + I+TM  +P   +WGALLG+CRIH 
Sbjct: 408  FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467

Query: 887  HLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWI 946
            + E AEIA+  LF+LEP    NY L+ N+ A +  W  V R+R  + E G+K     SW+
Sbjct: 468  NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527

Query: 947  QIDQ--IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
             +D+   +H F      HP + +I  +L  LV  +  LGY PD   V  D+ +  K  +L
Sbjct: 528  -VDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLIL 586

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
            + HTEKLA+ + L+ T   + I ++KN R+C DCH   +  S V G+ I +RD  RFHHF
Sbjct: 587  IQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHF 646

Query: 1065 REGECSCNDCW 1075
            R G+CSC D W
Sbjct: 647  RSGDCSCGDFW 657



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/471 (21%), Positives = 210/471 (44%), Gaps = 24/471 (5%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCR-DVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           ++H  ++++G D   ++   L+    K    ++   +   E     +  LW  +I     
Sbjct: 67  QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
             K++ AI ++  M+      +S T   +L+AC  +   + G+Q H    +      + V
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYV 186

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N +I MY +   ++ A +VFD M + ++ SW  +I++Y  +G ++ A  LF  + +   
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK-- 244

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
             D++ W  +++G   +   Q  L     M+  G R +  +V+  + A  +L   KY   
Sbjct: 245 --DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADR 302

Query: 554 SHGYILRNGLDYD--LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           +     ++G      + +G++L+DMY K   ++ A  VF +M N+N+  ++S+I G    
Sbjct: 303 AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATH 362

Query: 612 GLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVV 669
           G    A  + + M  + EIKP+ V++   +   S  G   +   +   M  + G+ P   
Sbjct: 363 GRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRD 422

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            +T ++    +    +E+L+    M    ++P+     +LL  C     + N  EI  + 
Sbjct: 423 HYTCMVDLLGRTGRLQEALELIKTMS---VEPHGGVWGALLGAC----RIHNNPEIAEIA 475

Query: 730 LKNGFIKDAYVATGLI---DMYSKSGN----LKSAREVFRKSANKTLA-SW 772
            ++ F  +  +    I   ++Y+ +G+    L+  + +  K   KT A SW
Sbjct: 476 AEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 38/275 (13%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  Y +  G+  E + ++G +  + +   S   + +LK C  +    LG + HA  
Sbjct: 117 WTAVIRGY-AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175

Query: 321 IK-RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR------ 373
            + RGF F V++   +++ Y KC  ++ A K+F E+ +  D + W E+I    R      
Sbjct: 176 FRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPE-RDVISWTELIAAYARVGNMEC 233

Query: 374 -------------------------NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
                                    N K + A++ F  M+ S  +A   T+   + ACA+
Sbjct: 234 AAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293

Query: 409 VGAFHEGKQIHGYVLKSAL--ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           +GA     +      KS      ++ + + LI MYS+   +E A  VF SM + N+ +++
Sbjct: 294 LGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYS 353

Query: 467 SMISSYTGLGYVDVAWSLFNKM-NSSRIQPDIITW 500
           SMI      G    A  LF+ M   + I+P+ +T+
Sbjct: 354 SMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTF 388



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 9/237 (3%)

Query: 706 MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS--AREVFRK 763
           +SSL+        L   K+IH   L+ G  +  Y+ T LI   +K G      AR V   
Sbjct: 49  VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEP 108

Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              +    W  +I G+AI G   EAI ++  + +    P + TF+ALL AC     +  G
Sbjct: 109 VQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
            + F + +        +   + M+D+  K   +D A      MP + D   W  L+ +  
Sbjct: 169 -RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER-DVISWTELIAAYA 226

Query: 884 IHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             G++E A      LF+  P  +   +  M+   A + + ++       M++ G+++
Sbjct: 227 RVGNMECAA----ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA 279


>gi|242077973|ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
 gi|241940105|gb|EES13250.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
          Length = 871

 Score =  371 bits (953), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 228/773 (29%), Positives = 381/773 (49%), Gaps = 61/773 (7%)

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A K+F  ++   D L W+ +I        +++ + L   M           I ++LQACA
Sbjct: 115  ARKVFEGMA-CRDLLAWSAMIGAYAIRGLYKDVVSLAVTMVREGVTPDRFLITRILQACA 173

Query: 408  KVGAFHEGKQIHGYVLKSALES----NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
                   G  +H   ++S   +    ++ V N +++MY +  +L  A  VF+ M   +L 
Sbjct: 174  YTEDLELGVAMHSLAIRSGFMAETARDVPVGNSVLAMYVKCRELGRARVVFEKMGQRDLG 233

Query: 464  SWNSMI-----------------------------------SSYTGLGYVDVAWSLFNKM 488
            +WNSMI                                   SSY   G +DVA  +  +M
Sbjct: 234  TWNSMIFGCCQSNEWEEARMLLDDMRREGTLPGVVTWNTLISSYARSGELDVAMEMLEQM 293

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLL 548
              S + PD++TW  L+SG          L     M+  G  PNG +++  + A   LRLL
Sbjct: 294  EESGVAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLAGVEPNGMTIASAISACASLRLL 353

Query: 549  KYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGY 608
              G E H + ++ G   ++  G SL+DMY K   +  A+ +F+ +  ++I +WNS+++GY
Sbjct: 354  SQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAKRIFNEIPEKDIFSWNSMVAGY 413

Query: 609  CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV 668
               G    A ++  +ME   ++ ++++WN ++SGY   G  + A  +   M++ G+  + 
Sbjct: 414  AQAGYCGKAYELFCKMESLGVRRNVITWNIMISGYIRNGDDERAFELFQMMESYGVKRDT 473

Query: 669  VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
             +W +LI+GS+ N +   +L+ F QMQ   ++P+  T+ S++     L      +EIH  
Sbjct: 474  ASWNALIAGSVHNGHSDRALRIFRQMQSLLVRPDYITILSIIPAFANLVAFSKVREIHAC 533

Query: 729  CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
               N    D  +A  LI+ YSKSG+L  A  VF + +++ + SWNC+I+   ++G+  EA
Sbjct: 534  IFHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSRNIISWNCIILAHLLHGSPCEA 593

Query: 789  ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
            +  F E+ + G +PD  T TA++ A    G V E  + F +M+ DYNI P ++HY+ +VD
Sbjct: 594  LDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKQIFYNMTHDYNIHPDLDHYAAIVD 653

Query: 849  LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
            LLG++G L EA++FI  MP  P+  +W ALL +  IHG+   A +A+R L  L+P +   
Sbjct: 654  LLGRSGSLQEAYEFIDNMPLIPNLAVWEALLTAASIHGNARLANLAARELSLLDPSDPRI 713

Query: 909  YNLMMNLLAMSNRWEDVERLR-----HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
              L+ N   ++ +  DV  +        +++V   SV      +I   V++FS       
Sbjct: 714  QRLVFNYWDLTGKSADVPLMTVYNKGRELEDVDSCSV------EIKNKVYLFSTSD---- 763

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID-EEEKGKVLLSHTEKLAIVYGLMKTKS 1022
                    L + ++E+K +        +    D EEEK ++   H EKLAI + +  +  
Sbjct: 764  -----NLALENTIAELKLIMIQIRMSLLCNGTDAEEEKEELSGIHCEKLAIAFAVSNSPP 818

Query: 1023 RAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
               IR+IK  R+CS CH  AK +S    R+I ++D    H F+ G+CSC D W
Sbjct: 819  FRNIRIIKTLRMCSLCHVFAKLVSEKYERQILIKDSNCLHKFKNGKCSCEDYW 871



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 200/420 (47%), Gaps = 52/420 (12%)

Query: 335 LMNFYGKCRDVESANKLFSEVSD---LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
           L++ Y +  +++ A ++  ++ +     D + W  ++   + +++   A++ F  M+ + 
Sbjct: 273 LISSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLAG 332

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +    TI   + ACA +    +G ++H + +K    +N+   N L+ MY++  ++  A 
Sbjct: 333 VEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAK 392

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           R+F+ + + ++ SWNSM++ Y   GY   A+ LF KM S  ++ ++ITWN ++SG+  +G
Sbjct: 393 RIFNEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCKMESLGVRRNVITWNIMISGYIRNG 452

Query: 512 -------------SY----------------------QNVLTLLRGMQSLGFRPNGSSVS 536
                        SY                         L + R MQSL  RP+  ++ 
Sbjct: 453 DDERAFELFQMMESYGVKRDTASWNALIAGSVHNGHSDRALRIFRQMQSLLVRPDYITIL 512

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            ++ A   L      RE H  I  N L+ D  +  +L++ Y K+  L  A  VFD   +R
Sbjct: 513 SIIPAFANLVAFSKVREIHACIFHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSR 572

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           NI++WN +I  +   G    A     +M++E ++PD  +  +++  Y + G+  EA  I 
Sbjct: 573 NIISWNCIILAHLLHGSPCEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKQIF 632

Query: 657 HHMKNS-GIYPNVVTWTSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           ++M +   I+P++  + +++     SGSLQ     E+ +F   M    + PN     +LL
Sbjct: 633 YNMTHDYNIHPDLDHYAAIVDLLGRSGSLQ-----EAYEFIDNMP---LIPNLAVWEALL 684



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 168/416 (40%), Gaps = 81/416 (19%)

Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
            R LS     H   IK+G + N+     SL+  Y + G+  +A + F     +    W+S
Sbjct: 350 LRLLSQGMELHCHAIKVGSV-NNVLSGNSLVDMYAKCGEIVAAKRIFNEIPEKDIFSWNS 408

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +  Y    G   +  E++ ++   GV  R  ++T  + +              +  I+ 
Sbjct: 409 MVAGYAQ-AGYCGKAYELFCKMESLGV--RRNVITWNIMI--------------SGYIRN 451

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G D        +M  YG  RD  S                WN +I   + N   + A+++
Sbjct: 452 GDDERAFELFQMMESYGVKRDTAS----------------WNALIAGSVHNGHSDRALRI 495

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           FR+MQ    +    TI+ ++ A A + AF + ++IH  +  + LE +  + N LI+ YS+
Sbjct: 496 FRQMQSLLVRPDYITILSIIPAFANLVAFSKVREIHACIFHNNLEMDGKIANALINAYSK 555

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
           +  L  A  VFD     N+ SWN +I +                                
Sbjct: 556 SGDLAGACAVFDRHSSRNIISWNCIILA-------------------------------- 583

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA------VTELRLLKYGRESHGY 557
              H  HGS    L     M+  G RP+ ++++ V++A      V+E + + Y   +H Y
Sbjct: 584 ---HLLHGSPCEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKQIFYNM-THDY 639

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKG 612
            +   LD+      +++D+  ++  LQ A E  DNM    N+  W +L++     G
Sbjct: 640 NIHPDLDH----YAAIVDLLGRSGSLQEAYEFIDNMPLIPNLAVWEALLTAASIHG 691



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/381 (20%), Positives = 158/381 (41%), Gaps = 23/381 (6%)

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T L+ M+     L +A++VF+ M  R+++AW+++I  Y  +GL+ +   +   M  E + 
Sbjct: 100 TKLITMHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYKDVVSLAVTMVREGVT 159

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYP----NVVTWTSLISGSLQNENYR 685
           PD      ++   + + +  E  V +H +   SG       +V    S+++  ++     
Sbjct: 160 PDRFLITRILQACA-YTEDLELGVAMHSLAIRSGFMAETARDVPVGNSVLAMYVKCRELG 218

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
            +   F +M Q D+     T +S++  C      +  + +     + G +        LI
Sbjct: 219 RARVVFEKMGQRDLG----TWNSMIFGCCQSNEWEEARMLLDDMRREGTLPGVVTWNTLI 274

Query: 746 DMYSKSGNLKSAREVFRKSANKTLA----SWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             Y++SG L  A E+  +     +A    +W  ++ GF       EA+  F  +   G +
Sbjct: 275 SSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLAGVE 334

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
           P+ +T  + ++AC +  L+ +G +     +     +  +   + +VD+  K G +  A  
Sbjct: 335 PNGMTIASAISACASLRLLSQGME-LHCHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAKR 393

Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPC----NSANYNLMMNLLA 917
               +P K D   W +++     +    Y   A     K+E      N   +N+M++   
Sbjct: 394 IFNEIPEK-DIFSWNSMVAG---YAQAGYCGKAYELFCKMESLGVRRNVITWNIMISGYI 449

Query: 918 MSNRWEDVERLRHSMDEVGVK 938
            +   E    L   M+  GVK
Sbjct: 450 RNGDDERAFELFQMMESYGVK 470


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  371 bits (953), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 196/571 (34%), Positives = 312/571 (54%), Gaps = 40/571 (7%)

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            ++ A    R L   R  H ++  +     +++  SL+ +Y K   + +A+ VFD M  R+
Sbjct: 70   LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 598  IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--------------- 642
            + +W SLI+GY    +   A  +L  M     KP+  ++ SL+                 
Sbjct: 130  MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 643  --------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
                                Y+  G+   A+ +   +++     N V+W +LI+G  +  
Sbjct: 190  LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK----NGVSWNALIAGFARKG 245

Query: 683  NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
            +   +L  F +MQ+   +    T SS+     G+G L+ GK +H   +K+G    A+V  
Sbjct: 246  DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 743  GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
             ++DMY+KSG++  AR+VF +   K + +WN M+  FA YG G+EA+  F E+ + G   
Sbjct: 306  TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 803  DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
            + ITF ++L AC + GLV+EG +YFD M  +YN+ P I+HY  +VDLLG+AG L++A  F
Sbjct: 366  NQITFLSILTACSHGGLVKEGKQYFDMMK-EYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424

Query: 863  IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
            I  MP KP A +WGALLGSCR+H + +  + A+  +F+L+P ++    L+ N+ A + +W
Sbjct: 425  IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQW 484

Query: 923  EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
            +   R+R  M   GVK     SW++I+  VH+F A    HP + EIY +   +  +++K 
Sbjct: 485  DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA 544

Query: 983  GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
            GYVP+T  V   +DE+E+   L  H+EK+A+ + L+     A IR++KN R+C DCH+A 
Sbjct: 545  GYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAF 604

Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCND 1073
            +Y+S V  REI +RD  RFHHF  G CSC D
Sbjct: 605  RYISKVFKREIVVRDTNRFHHFSSGSCSCGD 635



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 182/419 (43%), Gaps = 39/419 (9%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R+   ++  C +  +      +HA L    F   V L  +L++ Y KC  V  A ++F  
Sbjct: 65  RLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDG 124

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           +    D   W  +I    +N+  + A+ L   M     K    T   +L+A     +   
Sbjct: 125 MP-ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGI 183

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+QIH   +K     ++ V + L+ MY+R  ++++A  VFD ++  N  SWN++I+ +  
Sbjct: 184 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFA- 242

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                                               G  +  L +   MQ  GF     +
Sbjct: 243 ----------------------------------RKGDGETTLLMFAEMQRNGFEATHFT 268

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
            S V  A+  +  L+ G+  H +++++G     +VG +++DMY K+  + +A++VFD + 
Sbjct: 269 YSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVD 328

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
            +++V WNS+++ +   GL   A     +M +  +  + +++ S+++  S  G  KE   
Sbjct: 329 KKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388

Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               MK   + P +  + +++    +     ++L F  +M    +KP +    +LL +C
Sbjct: 389 YFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP---MKPTAAVWGALLGSC 444



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 178/425 (41%), Gaps = 67/425 (15%)

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           A  R    ++ ACA+  +  + + IH ++  S    ++ + N LI +Y +   +  A RV
Sbjct: 62  ATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRV 121

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
                                          F+ M +     D+ +W  L++G+  +   
Sbjct: 122 -------------------------------FDGMPAR----DMCSWTSLIAGYAQNDMP 146

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              L LL GM    F+PNG + + +L+A         G + H   ++     D+YVG++L
Sbjct: 147 DEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSAL 206

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL 633
           +DMY +   +  A  VFD ++++N V+WN+LI+G+  KG       M  +M+    +   
Sbjct: 207 LDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATH 266

Query: 634 VSWNSLVSGYSIWGQSKEALVIIHHMKNSG-------------IYP-------------- 666
            +++S+ S  +  G  ++   +  HM  SG             +Y               
Sbjct: 267 FTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDR 326

Query: 667 ----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
               +VVTW S+++   Q    RE++  F +M++  +  N  T  S+L  C   GL++ G
Sbjct: 327 VDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEG 386

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAI 781
           K+   +  +     +      ++D+  ++G L  A   +F+     T A W  ++    +
Sbjct: 387 KQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRM 446

Query: 782 YGNGK 786
           + N K
Sbjct: 447 HKNAK 451



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 12/313 (3%)

Query: 203 KFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWS 262
           ++R L   ++ HA +    +   S  +  SLI  Y + G    A + F    +R    W+
Sbjct: 76  RYRSLDDARAIHAHLAG-SQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWT 134

Query: 263 SFLEDYESFGGEVQELLEVWGELHGK----GVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
           S +  Y       + L  + G L G+    G  F S     +LK      +  +G ++HA
Sbjct: 135 SLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFAS-----LLKAAGASASSGIGEQIHA 189

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
             +K  +  DV++  AL++ Y +C  ++ A  +F ++   ++ + WN +I    R    E
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLES-KNGVSWNALIAGFARKGDGE 248

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
             + +F EMQ +  +A   T   +  A A +GA  +GK +H +++KS    +  V N ++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
            MY+++  +  A +VFD +   ++ +WNSM++++   G    A + F +M    +  + I
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 499 TWNCLLSGHFTHG 511
           T+  +L+   +HG
Sbjct: 369 TFLSILTA-CSHG 380



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 8/176 (4%)

Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
           SL+  C     L + + IH     + F    ++   LI +Y K G +  AR VF     +
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL---AACKNSGLVEEGW 824
            + SW  +I G+A      EA+ L   +L   F+P+  TF +LL    A  +SG+ E+  
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ-- 186

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
               +++  Y+    +   S ++D+  + G +D A      +  K +   W AL+ 
Sbjct: 187 --IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK-NGVSWNALIA 239



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 6/260 (2%)

Query: 214 HAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA  +K    W+ D  V S L+  Y   G    A   F    S++   W++ +  +    
Sbjct: 188 HALTVKYD--WHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR-K 244

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
           G+ +  L ++ E+   G        + +      + A   G  VHA +IK G      + 
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
             +++ Y K   +  A K+F  V D +D + WN ++    +      A+  F EM+    
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRV-DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 363

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA-T 451
                T + +L AC+  G   EGKQ    + +  LE  +     ++ +  R   L  A  
Sbjct: 364 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALV 423

Query: 452 RVFDSMKDHNLSSWNSMISS 471
            +F        + W +++ S
Sbjct: 424 FIFKMPMKPTAAVWGALLGS 443


>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 219/754 (29%), Positives = 378/754 (50%), Gaps = 47/754 (6%)

Query: 243 FTSAAKAFFLYFSRSYADWSSFLEDYESF---GGEVQELLEVWGELHGKGVIFRSRILTI 299
           F+S      ++F+  Y   S F +D+ S+    G ++E +     +  +G    +     
Sbjct: 28  FSSKPIKTSIFFT--YKLTSKFNDDHLSYLCSNGLLREAITAIDSISKRGSKLSTNTYIN 85

Query: 300 ILKLCTKLMAFWLGVEVHA--SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           +L+ C  + +  LG E+H    L+ R   F   ++  L++ Y KC  ++ A K+F  + +
Sbjct: 86  LLQTCIDVGSIELGRELHVRMGLVHRVNPF---VETKLVSMYAKCGCLKDARKVFDGMQE 142

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
             +   W+ +I    R ++W+  ++LF  M        +    K+LQAC         K 
Sbjct: 143 -RNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKL 201

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS------- 470
           IH  V++  L   + + N +++ + +  KL LA + F +M + +  SWN MI+       
Sbjct: 202 IHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGN 261

Query: 471 ----------------------------SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
                                       SY+ LG  D+   L  KM S  + PD+ TW  
Sbjct: 262 GDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTS 321

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++SG          L   + M   G  PN  +++    A   L+ L+ G E H + ++ G
Sbjct: 322 MISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMG 381

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
           +  +  VG SL+DMY K   L+ A+ VFD +  +++  WNS+I GYC  G    A ++  
Sbjct: 382 IARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFM 441

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQN 681
           ++ E  + P++V+WN+++SG    G   +A+ +   M K+ G+  N  +W SLI+G  Q 
Sbjct: 442 RLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQL 501

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
               ++L  F QMQ  +  PNS T+ S+L  C  +   +  KEIH   L+     +  VA
Sbjct: 502 GEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVA 561

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
             L+D Y+KSGN+K +R VF   ++K + +WN +I G+ ++G    A  LF ++   G +
Sbjct: 562 NSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIR 621

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
           P+  T  +++ A   +G+V++G   F S++ ++ I+PT++HY  MVDL G++G L +A +
Sbjct: 622 PNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIE 681

Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
           FI  MP +PD +IW +LL +CR HG+L  A +A++RL +LEP N   Y L++   A+  +
Sbjct: 682 FIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGK 741

Query: 922 WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
           +E   ++R    E  +K      W+++   VH+F
Sbjct: 742 FEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLF 775



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 177/660 (26%), Positives = 299/660 (45%), Gaps = 75/660 (11%)

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
            AI     +    +K  + T + +LQ C  VG+   G+++H   +      N  V   L+S
Sbjct: 64   AITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELH-VRMGLVHRVNPFVETKLVS 122

Query: 440  MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
            MY++   L+ A +VFD M++ NL +W++MI +Y                  SR Q     
Sbjct: 123  MYAKCGCLKDARKVFDGMQERNLYTWSAMIGAY------------------SREQ----- 159

Query: 500  WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
                         ++ V+ L   M   G  P+      +LQA      L+  +  H  ++
Sbjct: 160  ------------RWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVI 207

Query: 560  RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
            R GL   + +  S++  +VK   L  A++ F NM  R+ V+WN +I+GYC KG    A++
Sbjct: 208  RCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARR 267

Query: 620  MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
            +L+ M  +  KP LV++N +++ YS  G     + +   M++ G+ P+V TWTS+ISG  
Sbjct: 268  LLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFS 327

Query: 680  QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
            Q+    ++L FF +M    ++PN+ T++S    C  L  LQNG EIHC  +K G  ++  
Sbjct: 328  QSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETL 387

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            V   LIDMYSK G L++AR VF     K + +WN MI G+   G G +A  LF  L E+ 
Sbjct: 388  VGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLREST 447

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
              P+ +T+ A+++ C  +G  ++    F  M  D  +      ++ ++    + G  ++A
Sbjct: 448  VMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKA 507

Query: 860  WDFIRTMP---FKPDATIWGALLGSC-RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
                R M    F P++    ++L +C  +    +  EI    L +      A  N +++ 
Sbjct: 508  LAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDT 567

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A S    +++  R   + +  K ++ W+ I    I+H  S                + L
Sbjct: 568  YAKSG---NIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSA-------------FQL 611

Query: 976  VSEMKKLGYVPDT-------------------RCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
              +M+ LG  P+                    R V+  I EE +    L H   +  +YG
Sbjct: 612  FDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYG 671


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 692

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 206/584 (35%), Positives = 308/584 (52%), Gaps = 42/584 (7%)

Query: 530  PNGSSVSVVLQAVTELRL---LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            PN S ++  +   +  RL   L+ G + H   L+     + +V TSL+ +Y +   L  A
Sbjct: 113  PNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRA 172

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------LVSW 636
            Q VFD M + + V+W +LI+ Y   G    A  +        ++PD              
Sbjct: 173  QRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARV 232

Query: 637  NSLVSGYSIW-------------------------GQSKEALVIIHHMKNSGIYPNVVTW 671
              L +G ++W                         G+  +A  +   M++     + V W
Sbjct: 233  ADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDK----DAVAW 288

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             +++ G   N + RE+L  F+ MQ E ++P+   ++  L  C  LG L  G++   +   
Sbjct: 289  GAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDW 348

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            + F+ +  + T LIDMY+K G+   A  VF++   K +  WN MI+G  + G+ K A  L
Sbjct: 349  DEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTL 408

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
              ++ ++G + +  TF  LL +C ++GL+++G +YF +M+  Y+I P IEHY C+VDLL 
Sbjct: 409  IGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLS 468

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L EA   I  MP   +A I GALLG C+IH + E AE    +L +LEP NS NY +
Sbjct: 469  RAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVM 528

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ +   RWED  +LR  M E GV+ V   SW++ +  VH F      HP + +IY +
Sbjct: 529  LSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKK 588

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            L  L  EMK +GY P T  V  D+++EEK   L+ H+EKLAI + L+ T     IRV KN
Sbjct: 589  LDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKN 648

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVCSDCHTA K +S +  REI +RD  RFH FR+G CSCND W
Sbjct: 649  LRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/405 (22%), Positives = 164/405 (40%), Gaps = 79/405 (19%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+Q+H   LK    +N  V   L+++Y+R   L  A RVFD M                 
Sbjct: 137 GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMP---------------- 180

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                               P  ++W  L++ +   G  +  + + R   + G RP+  +
Sbjct: 181 -------------------HPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFT 221

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
              VL A   +  L  G        + G+   ++V T+ +D+YVK   +  A+EVFD M+
Sbjct: 222 AVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMR 281

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------- 632
           +++ VAW +++ GY   G    A  +   M+ E ++PD                      
Sbjct: 282 DKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ 341

Query: 633 ---LVSWN----------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
              +V W+          +L+  Y+  G + EA V+   M+      +++ W ++I G  
Sbjct: 342 AIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKK----DIIVWNAMILGLG 397

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
              + + +     QM++  +K N  T   LL +C   GL+Q+G+       K   I    
Sbjct: 398 MTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 457

Query: 740 VATG-LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
              G ++D+ S++G L+ A ++     +      N +I+G  + G
Sbjct: 458 EHYGCIVDLLSRAGLLQEAHQLI----DDMPMPANAVILGALLGG 498



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 174/417 (41%), Gaps = 41/417 (9%)

Query: 299 IILKLCTKL-MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
           I LK  ++L      G ++HA  +K     + H+  +L+  Y +C  +  A ++F E+  
Sbjct: 122 IALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPH 181

Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
               + W  +I   +       A+ + R    +  +  S T V++L ACA+V     G+ 
Sbjct: 182 -PSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGET 240

Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
           +     +  +  ++ V    + +Y +  ++  A  VFD M+D +  +W +M+  Y   G+
Sbjct: 241 VWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGH 300

Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
              A  LF  M                                   Q+ G RP+  +V+ 
Sbjct: 301 PREALDLFLAM-----------------------------------QAEGVRPDCYAVAG 325

Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
            L A T L  L  GR++   +  +    +  +GT+L+DMY K      A  VF  M+ ++
Sbjct: 326 ALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKD 385

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
           I+ WN++I G    G    A  ++ QME+  +K +  ++  L+   +  G  ++     H
Sbjct: 386 IIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFH 445

Query: 658 HM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +M K   I P +  +  ++    +    +E+ +    M    +  N+  + +LL  C
Sbjct: 446 NMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMP---MPANAVILGALLGGC 499



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 117/281 (41%), Gaps = 3/281 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA+ +K+    N   ++ SL+  Y   G    A + F      S   W++ +  Y    G
Sbjct: 141 HARSLKLPSHTNPH-VLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD-AG 198

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           +++E + V       G+   S     +L  C ++     G  V  +  + G    V +  
Sbjct: 199 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 258

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A ++ Y KC ++  A ++F ++ D +D + W  ++     N     A+ LF  MQ    +
Sbjct: 259 AAVDLYVKCGEMAKAREVFDKMRD-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 317

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                +   L AC ++GA   G+Q    V       N  +   LI MY++      A  V
Sbjct: 318 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVV 377

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           F  M+  ++  WN+MI      G+   A++L  +M  S ++
Sbjct: 378 FQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVK 418


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 206/652 (31%), Positives = 328/652 (50%), Gaps = 83/652 (12%)

Query: 504  LSGHFTHGSYQNVLTLL----RGMQSLGF-----RPNGSSVSVVLQAVTELRLLKYGRES 554
            LS H  H  ++ ++ L     R  +++ +     +P+    S ++ A    R L+ G+  
Sbjct: 26   LSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRV 85

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ--------------------------- 587
            H +   +     + +   L+ MY K   L +AQ                           
Sbjct: 86   HAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRI 145

Query: 588  ----EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE--------------- 628
                ++FD M +R+  +WN++ISGY  +G ++ A  +   M+E E               
Sbjct: 146  EQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAA 205

Query: 629  ---------------------IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
                                 ++ D V W +L+  Y   G   EA  I   M +     +
Sbjct: 206  AAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADK----D 261

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
            +V+WT++I    ++   +E    F  +    ++PN  T + +L  C  L   Q GKE+H 
Sbjct: 262  IVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHG 321

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
               + G+   ++ A+ L+ +YSK GN ++AR VF +     L SW  +I+G+A  G    
Sbjct: 322  YMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDM 381

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+  F  LL +G +PD ITF  +L+AC ++GLV+ G +YF S+   + ++ T +HY+C++
Sbjct: 382  ALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVI 441

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLL ++G   EA + I  MP KPD  +W +LLG CRIHG++E AE A++ LF+LEP N A
Sbjct: 442  DLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPA 501

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y  + N+ A +  W +  ++R+ MD  G+      SWI+I + VHVF      HP   +
Sbjct: 502  TYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISD 561

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I+  L  L  +MK+ GYV DT  V  D++EE+K + +  H+EKLA+ +G++ T    PI+
Sbjct: 562  IHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIK 621

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN---DCWQ 1076
            V KN R C DCH A KY+S +  R+I +RD  RFH F +G CSC    DCW+
Sbjct: 622  VFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDYCDCWK 673



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 184/452 (40%), Gaps = 72/452 (15%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R+ + ++  C +     LG  VHA      F   + +   L++ Y KC  +  A  LF E
Sbjct: 64  RLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDE 123

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM----QFSSAKAISRTI----------- 399
           +   +D   WN +I       + E A KLF EM     FS    IS  +           
Sbjct: 124 IPQ-KDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDL 182

Query: 400 VKMLQ-----------------ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
            +M+Q                 A A + +   GK+IHGY+++S LE +  V         
Sbjct: 183 FRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVV--------- 233

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
                                 W +++  Y   G ++ A  +F++M       DI++W  
Sbjct: 234 ----------------------WTALLDLYGKCGSLNEARGIFDQMADK----DIVSWTT 267

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++   F  G  +   +L R +   G RPN  + + VL A  +L   + G+E HGY+ R G
Sbjct: 268 MIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVG 327

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            D   +  ++L+ +Y K    + A+ VF+ M   ++V+W SLI GY   G    A +   
Sbjct: 328 YDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFE 387

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQN 681
            +     KPD +++  ++S  +  G     L   H +K   G+      +  +I    ++
Sbjct: 388 SLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARS 447

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++E+      M    +KP+    +SLL  C
Sbjct: 448 GRFKEAENIIDNMP---MKPDKFLWASLLGGC 476



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 20/256 (7%)

Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED-Y 268
           K  H  +I+ G     D++V  +L+  Y + G    A   F     +    W++ +   +
Sbjct: 216 KEIHGYLIRSG--LELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCF 273

Query: 269 ESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
           E   G  +E   ++ +L G GV         +L  C  L A  +G EVH  + + G+D  
Sbjct: 274 ED--GRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPF 331

Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
                AL++ Y KC + E+A ++F+++    D + W  +I+   +N + + A++ F  + 
Sbjct: 332 SFAASALVHVYSKCGNTETARRVFNQMPR-PDLVSWTSLIVGYAQNGQPDMALQFFESLL 390

Query: 389 FSSAKAISRTIVKMLQACAKVGA-------FHEGKQIHGYVLKSALESNLSVCNCLISMY 441
            S  K    T V +L AC   G        FH  K+ HG V  +   +      C+I + 
Sbjct: 391 RSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYA------CVIDLL 444

Query: 442 SRNNKLELATRVFDSM 457
           +R+ + + A  + D+M
Sbjct: 445 ARSGRFKEAENIIDNM 460


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 221/748 (29%), Positives = 385/748 (51%), Gaps = 69/748 (9%)

Query: 273 GEVQELLEVWGELHGK-GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G  +E L V+ +L  K G      +L  +++ CT+L     G ++H  +++ GFD DV++
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             +L++FY K  B+E A  +F ++ + +  + W  II    +  +   +++LF +M+ ++
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLE-KTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN 133

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                  +  +L AC+ +     GKQIH YVL+   E ++SV N LI  Y++ N+++   
Sbjct: 134 VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 193

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           ++FD M   N+ SW +MIS Y    +   A  LF +MN                      
Sbjct: 194 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN---------------------- 231

Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                         LG++P+G + + VL +   L  L+ GR+ H Y ++  L+ + +V  
Sbjct: 232 -------------RLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKN 278

Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            L+DMY K++ L +A++VFD M  +N++++N++I GY  +     A ++ ++M      P
Sbjct: 279 GLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPP 338

Query: 632 DLVSWNSLVS---------------------GYSIWGQSKEALVIIH----------HMK 660
            L+++ SL+                      G S+   +  AL+ ++          H+ 
Sbjct: 339 SLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVF 398

Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
                 ++V W ++  G  Q+    E+LK +  +Q    KPN  T ++L+     L  L+
Sbjct: 399 EEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLR 458

Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
           +G++ H   +K G     +V   L+DMY+K G+++ AR++F  S  + +  WN MI   A
Sbjct: 459 HGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHA 518

Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
            +G  +EA+ +F E+++ G QP+ +TF A+L+AC ++G VE+G  +F+SM   + I P  
Sbjct: 519 QHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFGIKPGT 577

Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
           EHY+C+V LLG++G L EA +FI  MP +P A +W +LL +CRI G++E  + A+     
Sbjct: 578 EHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIS 637

Query: 901 LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA 960
            +P +S +Y L+ N+ A    W DV+++R  MD   V      SWI+++  V+VF A   
Sbjct: 638 TDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXT 697

Query: 961 PHPATGEIYFELYHLVSEMKKLGYVPDT 988
            H     I   L  L+  +K  GYVPD 
Sbjct: 698 THREADMIGSVLDILIQHIKGAGYVPDA 725



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 172/644 (26%), Positives = 285/644 (44%), Gaps = 123/644 (19%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           SLI  Y + GB   A   F     ++   W++ +  Y   G     L E++ ++    V+
Sbjct: 77  SLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSL-ELFAQMRETNVV 135

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
               +++ +L  C+ L     G ++HA +++RG + DV +   L++FY KC  V++  KL
Sbjct: 136 PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKL 195

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNE-KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           F ++  +++ + W  +I   ++N   WE A+KLF EM     K        +L +C  + 
Sbjct: 196 FDQMV-VKNIISWTTMISGYMQNSFDWE-AMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
           A  +G+Q+H Y +K+ LESN  V N LI MY+++N L  A +VFD M + N+ S+N+MI 
Sbjct: 254 ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE 313

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            Y+    +  A  LF++M      P ++T+  LL                          
Sbjct: 314 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL-------------------------- 347

Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            G S S        L  L+  ++ HG I++ G+  DL+ G++L+D+Y K   +++A+ VF
Sbjct: 348 -GVSAS--------LFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVF 398

Query: 591 DNMKNRNIVAWNSLISGY--------------------------CFKGLFVNAKKMLNQM 624
           + M  ++IV WN++  GY                           F  L   A  + +  
Sbjct: 399 EEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLR 458

Query: 625 EEEEIKPDLVSW---------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
             ++    LV           N+LV  Y+  G  +EA      M NS I+ +VV W S+I
Sbjct: 459 HGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA----RKMFNSSIWRDVVCWNSMI 514

Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG----KEIHCLCLK 731
           S   Q+    E+L  F +M +E I+PN  T  ++L  C   G +++G      +    +K
Sbjct: 515 STHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIK 574

Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            G    A V    + +  +SG L  A+E   K                            
Sbjct: 575 PGTEHYACV----VSLLGRSGKLFEAKEFIEKMP-------------------------- 604

Query: 792 FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM--STD 833
                    +P AI + +LL+AC+ +G VE G KY   M  STD
Sbjct: 605 --------IEPAAIVWRSLLSACRIAGNVELG-KYAAEMAISTD 639



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 231/490 (47%), Gaps = 31/490 (6%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSR 256
           L        L   +  HA  IK      S++ VK+ LI  Y +      A K F +   +
Sbjct: 246 LTSCGSLEALEQGRQVHAYTIKAN--LESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQ 303

Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGV 314
           +   +++ +E Y S   ++ E LE++ E+  +  +F   +LT +  L +   L A  L  
Sbjct: 304 NVISYNAMIEGYSS-QEKLSEALELFHEMRVR--LFPPSLLTFVSLLGVSASLFALELSK 360

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
           ++H  +IK G   D+    AL++ Y KC  V+ A  +F E+++ +D ++WN +     ++
Sbjct: 361 QIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE-KDIVVWNAMFFGYTQH 419

Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
            + E A+KL+  +QFS  K    T   ++ A + + +   G+Q H  ++K  L+    V 
Sbjct: 420 LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 479

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           N L+ MY++   +E A ++F+S    ++  WNSMIS++   G  + A  +F +M    IQ
Sbjct: 480 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 539

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR-- 552
           P+ +T+  +LS     G  ++ L     M   G +P     + V+       L + G+  
Sbjct: 540 PNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSL-----LGRSGKLF 594

Query: 553 ESHGYILRNGLDYDLYVGTSLMD---MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
           E+  +I +  ++    V  SL+    +    +  + A E+  +   ++  ++  L + + 
Sbjct: 595 EAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFA 654

Query: 610 FKGLFVNAKKMLNQMEEEE-IKPDLVSWNSLVSGYSIW----GQSKEALVI-------IH 657
            KG++ + KK+ ++M+  E +K    SW  + +  +++       +EA +I       I 
Sbjct: 655 SKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQ 714

Query: 658 HMKNSGIYPN 667
           H+K +G  P+
Sbjct: 715 HIKGAGYVPD 724



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 142/316 (44%), Gaps = 74/316 (23%)

Query: 679 LQNENY-RESLKFFIQMQQEDIK-PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
           +++E Y  E+L  F+ +Q++  + PN   ++S+++ C  LG+++ G ++H   +++GF +
Sbjct: 11  MEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQ 70

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
           D YV T LID YSK+GB++ AR VF +   KT  +W  +I G+   G    ++ LF ++ 
Sbjct: 71  DVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMR 130

Query: 797 ETGFQPDAITFTALLAACK-----------------------------------NSGLVE 821
           ET   PD    +++L+AC                                        V+
Sbjct: 131 ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVK 190

Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF--------IRTMPFKPDAT 873
            G K FD M     ++  I  ++ M+     +GY+  ++D+        +  + +KPD  
Sbjct: 191 AGRKLFDQM-----VVKNIISWTTMI-----SGYMQNSFDWEAMKLFGEMNRLGWKPDGF 240

Query: 874 IWGALLGSC----------RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWE 923
              ++L SC          ++H +   A + S    K         N ++++ A SN   
Sbjct: 241 ACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVK---------NGLIDMYAKSNLLX 291

Query: 924 DVERLRHSMDEVGVKS 939
           D +++   M E  V S
Sbjct: 292 DAKKVFDVMAEQNVIS 307


>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 200/578 (34%), Positives = 319/578 (55%), Gaps = 37/578 (6%)

Query: 529  RPNGSSVSVV-----LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC- 582
            +PN  + S++     +  + +   LK  ++   Y ++     +  V T  ++    N   
Sbjct: 15   KPNTETTSLLPLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTK 74

Query: 583  --LQNAQEVFDNMKNRNIVAWNSLISGY---------------CFKGLFVNAKKMLNQME 625
              +++A ++FD +   NIV +N++  GY               C +   V+  K L + +
Sbjct: 75   ASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCLR--LVSKVKALAEGK 132

Query: 626  EEE-------IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
            +         +  ++    +L++ Y+  G    +  +   +      P VV + ++I   
Sbjct: 133  QLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDE----PCVVAYNAIIMSL 188

Query: 679  LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
             +N    E+L  F ++Q+  +KP   TM  +L +C  LG L  G+ +H    K GF +  
Sbjct: 189  ARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYV 248

Query: 739  YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
             V T LIDMY+K G+L  A  VFR    +   +W+ +I+ +A +G+G +AI + +E+ + 
Sbjct: 249  KVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKE 308

Query: 799  GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
              QPD ITF  +L AC ++GLVEEG++YF  M+ +Y I+P+I+HY CMVDLLG+AG LDE
Sbjct: 309  KVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDE 368

Query: 859  AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
            A+ FI  +P KP   +W  LL +C  HG++E  +    R+F+L+  +  +Y +  NL A 
Sbjct: 369  AYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCAR 428

Query: 919  SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
              +W+DV  LR +M + G   +   S I+++ +VH F A    H  +  ++  L  LV E
Sbjct: 429  YGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKE 488

Query: 979  MKKLGYVPDTRCV-YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSD 1037
            +K  GYVPDT  V Y D+++EEK  +L  H+EKLAI +GL+ T     IRV+KN RVC D
Sbjct: 489  LKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGD 548

Query: 1038 CHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            CH AAK++SL+ GR+I LRD  RFHHF++G+CSC D W
Sbjct: 549  CHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 151/326 (46%), Gaps = 39/326 (11%)

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
           + L+  +KV A  EGKQ+H + +K  +  N+ V   LI+MY                   
Sbjct: 117 RCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMY------------------- 157

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
                       T  G +D +  +F+K++    +P ++ +N ++     +      L L 
Sbjct: 158 ------------TACGDIDASRRVFDKID----EPCVVAYNAIIMSLARNNRANEALALF 201

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
           R +Q +G +P   ++ VVL +   L  L  GR  H Y+ + G D  + V T+L+DMY K 
Sbjct: 202 RELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKC 261

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             L +A  VF +M  R+  AW+++I  Y   G    A  MLN+M++E+++PD +++  ++
Sbjct: 262 GSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGIL 321

Query: 641 SGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
              S  G  +E     H M N  GI P++  +  ++    +     E+ KF  ++    I
Sbjct: 322 YACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELP---I 378

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEI 725
           KP      +LL  C   G ++ GK +
Sbjct: 379 KPTPILWRTLLSACSTHGNVEMGKRV 404



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 1/223 (0%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L+L +K+ A   G ++H   +K G   ++++   L+N Y  C D++++ ++F ++ D   
Sbjct: 119 LRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKI-DEPC 177

Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
            + +N IIM   RN +   A+ LFRE+Q    K    T++ +L +CA +G+   G+ +H 
Sbjct: 178 VVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHE 237

Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
           YV K   +  + V   LI MY++   L+ A  VF  M   +  +W+++I +Y   G    
Sbjct: 238 YVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQ 297

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           A S+ N+M   ++QPD IT+  +L     +G  +       GM
Sbjct: 298 AISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGM 340



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 9/295 (3%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDM--VKSLIFHYLEFGDFTSAAKAFFLYFS 255
           L   +K + L+  K  H   +K+G    SD+M  V +LI  Y   GD  ++ + F     
Sbjct: 119 LRLVSKVKALAEGKQLHCFAVKLGV---SDNMYVVPTLINMYTACGDIDASRRVFDKIDE 175

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
                +++ +    +      E L ++ EL   G+      + ++L  C  L +  LG  
Sbjct: 176 PCVVAYNAIIMSL-ARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRW 234

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H  + K GFD  V +   L++ Y KC  ++ A  +F ++    D   W+ II+    + 
Sbjct: 235 MHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPK-RDTQAWSAIIVAYATHG 293

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVC 434
               AI +  EM+    +    T + +L AC+  G   EG +  HG   +  +  ++   
Sbjct: 294 DGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHY 353

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSS-WNSMISSYTGLGYVDVAWSLFNKM 488
            C++ +  R  +L+ A +  D +        W +++S+ +  G V++   +  ++
Sbjct: 354 GCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERI 408


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 580

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 200/557 (35%), Positives = 312/557 (56%), Gaps = 41/557 (7%)

Query: 556  GYILRNGLDYDLYVGTSLMD--MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC---- 609
             +++R  L  D ++ + L++      +  +  A  +F    + N+  WN++I GY     
Sbjct: 28   AHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDS 87

Query: 610  -------FKGLFV---------------NAKKMLNQMEEEEIKPDLVSW---------NS 638
                   ++ +F+                  K+L   E +E+   +V           N 
Sbjct: 88   PITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNG 147

Query: 639  LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            L+  Y+  G    A V+   M      P+  +W++++SG  QN    E+LK F +MQ E+
Sbjct: 148  LIKLYAACGCMDYACVMFDEMPE----PDSASWSTMVSGYAQNGQAVEALKLFREMQAEN 203

Query: 699  IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
            +  ++ T++S++  CG LG L  GK +H    K G   D  + T L+ MYSK G+L +A 
Sbjct: 204  VSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNAL 263

Query: 759  EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            +VF+  A + + +W+ MI G+AI+G+G++A+ LF  +  +   P+ +TFT++L+AC +SG
Sbjct: 264  KVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSG 323

Query: 819  LVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGAL 878
            LVE+G + F++M T+Y I P I+HY CMVDL  +AG +  A  FI+TMP +P+  +W  L
Sbjct: 324  LVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTL 383

Query: 879  LGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVK 938
            LG+C+ HG+ +  E  SR++ KL+P +  NY L+ N+ A   RW  V ++R  M +   K
Sbjct: 384  LGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPK 443

Query: 939  SVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEE 998
                WS I+I+ +VH F      HP   +IY  L+ +  ++K++G+V  T  V  DIDEE
Sbjct: 444  KQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHDIDEE 503

Query: 999  EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
            EK   L  H+E+LAI YGL+ T + +PIR++KN RVC DCH   K +S V  REI +RD 
Sbjct: 504  EKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNREIIVRDR 563

Query: 1059 ARFHHFREGECSCNDCW 1075
             RFHHFRE  CSCND W
Sbjct: 564  VRFHHFRERGCSCNDYW 580



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 196/443 (44%), Gaps = 46/443 (10%)

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
           V  A+++FS  +   +  +WN II     ++    AI L+R+M        S T   +L+
Sbjct: 57  VAYAHRIFS-CTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLK 115

Query: 405 ACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           AC K+    EG+++H  ++K  L+    + N LI +Y+                      
Sbjct: 116 ACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYA---------------------- 153

Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
                      G +D A  +F++M     +PD  +W+ ++SG+  +G     L L R MQ
Sbjct: 154 ---------ACGCMDYACVMFDEMP----EPDSASWSTMVSGYAQNGQAVEALKLFREMQ 200

Query: 525 SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ 584
           +     +  +++ V+    +L  L  G+  H Y+ + G+  D+ +GT+L+ MY K   L 
Sbjct: 201 AENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLD 260

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
           NA +VF  M  R++ AW+++I+GY   G    A ++ + M+  +  P+ V++ S++S  S
Sbjct: 261 NALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACS 320

Query: 645 IWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
             G  ++   I   M     I P +  +  ++    +      + KF   +Q   I+PN 
Sbjct: 321 HSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKF---IQTMPIEPNV 377

Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLK-NGFIKDAYVATGLIDMYSKSGNLKS---ARE 759
               +LL  C   G    G+ I    LK +    + YV     ++Y+  G   S    R 
Sbjct: 378 VLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVS--NVYASLGRWSSVCQVRS 435

Query: 760 VFRKSANKTLASWNCMIMGFAIY 782
           + +  A K    W+ + + F ++
Sbjct: 436 LMKDKAPKKQHGWSSIEINFMVH 458



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 129/246 (52%), Gaps = 2/246 (0%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W++ +  Y S        + ++ ++   G+   S     +LK C KL+    G E+H+ +
Sbjct: 75  WNTIIRGY-SISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQI 133

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           +K G DF+  L   L+  Y  C  ++ A  +F E+ +  D   W+ ++    +N +   A
Sbjct: 134 VKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPE-PDSASWSTMVSGYAQNGQAVEA 192

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           +KLFREMQ  +  + + T+  ++  C  +GA   GK +H Y+ K  ++ ++ +   L+ M
Sbjct: 193 LKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGM 252

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW 500
           YS+   L+ A +VF  M + ++++W++MI+ Y   G+ + A  LF+ M  S+  P+ +T+
Sbjct: 253 YSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTF 312

Query: 501 NCLLSG 506
             +LS 
Sbjct: 313 TSVLSA 318



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 158/365 (43%), Gaps = 28/365 (7%)

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           S+ T  G+V  A  +F    S    P++  WN ++ G+    S    + L R M   G  
Sbjct: 49  SAVTLSGHVAYAHRIF----SCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGIS 104

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           PN  +   VL+A  +L  L  G+E H  I++ GLD++  +   L+ +Y    C+  A  +
Sbjct: 105 PNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVM 164

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
           FD M   +  +W++++SGY   G  V A K+  +M+ E +  D  +  S+V      G  
Sbjct: 165 FDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGAL 224

Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLIS-----GSLQNENYRESLKFFIQMQQEDIKPNST 704
                +  +M   G+  +VV  T+L+      GSL N     +LK F  M + D+   ST
Sbjct: 225 DLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDN-----ALKVFQGMAERDVTAWST 279

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK- 763
            ++       G   LQ    +     ++  I +    T ++   S SG ++   ++F   
Sbjct: 280 MIAGYAIHGHGEKALQLFDAMK----RSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETM 335

Query: 764 ----SANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITFTALLAACKNSG 818
                    +  + CM+  F   G    A    H+ ++T   +P+ + +  LL ACK  G
Sbjct: 336 WTEYKITPQIKHYGCMVDLFCRAGMVGHA----HKFIQTMPIEPNVVLWRTLLGACKTHG 391

Query: 819 LVEEG 823
             + G
Sbjct: 392 YKDLG 396



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 146/341 (42%), Gaps = 17/341 (4%)

Query: 161 SHKPN-----------SITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSS 209
           +H PN           SI++SP +      D        +  + GF  L    K   L  
Sbjct: 67  THHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGF-VLKACCKLLRLCE 125

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
            +  H+Q++K+G  + +  +V  LI  Y   G    A   F        A WS+ +  Y 
Sbjct: 126 GQELHSQIVKVGLDFETP-LVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYA 184

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G+  E L+++ E+  + V   +  L  ++ +C  L A  LG  VH+ + K G   DV
Sbjct: 185 Q-NGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDV 243

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            L  AL+  Y KC  +++A K+F  +++  D   W+ +I     +   E A++LF  M+ 
Sbjct: 244 VLGTALVGMYSKCGSLDNALKVFQGMAE-RDVTAWSTMIAGYAIHGHGEKALQLFDAMKR 302

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLE 448
           S       T   +L AC+  G   +G QI   +  +  +   +    C++ ++ R   + 
Sbjct: 303 SKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVG 362

Query: 449 LATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            A +   +M  + N+  W +++ +    GY D+   +  K+
Sbjct: 363 HAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKI 403


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
            chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
            chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 188/585 (32%), Positives = 324/585 (55%), Gaps = 41/585 (7%)

Query: 527  GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            GF    S+   ++ A   L+ ++  +    Y++ NG + D Y+   ++ M+VK   + +A
Sbjct: 127  GFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDA 186

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE------------------- 627
              +FD M  RN V+W ++ISGY   G +V A ++   M EE                   
Sbjct: 187  CRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGL 246

Query: 628  ----------------EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
                             +  D+    +L+  YS  G  ++A  +   M +      +V W
Sbjct: 247  EIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDK----TIVGW 302

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             S+I+G   +    E+L  + +M+   +K +  T S +++ C  L  +   K++H   ++
Sbjct: 303  NSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVR 362

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            NGF  D    T L+D YSK G +  AR VF + + + + SWN +I G+  +G+G+EAI +
Sbjct: 363  NGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDM 422

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
            F ++L  G  P+ +TF A+L+AC  SGL E GW+ F SM+ D+ + P   H++CM++LLG
Sbjct: 423  FEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLG 482

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            + G LDEA+  IR  PF+P A +W ALL +CR+HG+LE  + A+ +L+ +EP   +NY +
Sbjct: 483  REGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIV 542

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            ++N+   S + ++   +  ++   G++ +   SWI+++   H F +    H    ++  +
Sbjct: 543  LLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGK 602

Query: 972  LYHLVSEMKKLGYVPDTR-CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
            +  L+  + KLGYVP+ +  +  D+DE E+ K+ + H+EKLAI YGL+ T  + P+++++
Sbjct: 603  VDELMLNISKLGYVPEEQNFMLPDVDENEE-KIRMYHSEKLAIAYGLLNTLEKTPLQIVQ 661

Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + R+CSDCH+  K ++++  REI +RD +RFHHFR+G CSC D W
Sbjct: 662  SHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 207/452 (45%), Gaps = 43/452 (9%)

Query: 320 LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           ++  GF+ D +++  ++  + KC  +  A +LF E+    + + W  II   + +  +  
Sbjct: 158 MVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMP-ARNAVSWGTIISGYVDSGNYVE 216

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
           A +LF  M+        RT   M++A A +     G+Q+H   +K+ L  ++ V   LI 
Sbjct: 217 AFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALID 276

Query: 440 MYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIIT 499
           MYS+   LE A  VFD M D                                     I+ 
Sbjct: 277 MYSKCGSLEDAHCVFDEMPDKT-----------------------------------IVG 301

Query: 500 WNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYIL 559
           WN +++G+  HG  +  L L   M+  G + +  + S++++  + L  +   ++ H  ++
Sbjct: 302 WNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLV 361

Query: 560 RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKK 619
           RNG   D+   T+L+D Y K   + +A+ VFD M  RNI++WN+LI+GY   G    A  
Sbjct: 362 RNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAID 421

Query: 620 MLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGS 678
           M  +M  E + P+ V++ +++S  SI G  +    I   M ++  + P  + +  +I   
Sbjct: 422 MFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIE-L 480

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK-EIHCLCLKNGFIKD 737
           L  E   +  + +  +++   +P +   ++LL+ C   G L+ GK     L         
Sbjct: 481 LGREGLLD--EAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLS 538

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            Y+   L+++Y+ SG LK A +VF+    K L
Sbjct: 539 NYIV--LLNIYNSSGKLKEAADVFQTLKRKGL 568



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 116/533 (21%), Positives = 218/533 (40%), Gaps = 114/533 (21%)

Query: 375 EKWENAIKLFREMQFSSAKAIS-RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           +K+ +A+++F   +      +   T   ++ AC  + +    K++  Y++ +  E +  +
Sbjct: 110 KKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYM 169

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N ++ M+ +   +  A R+FD M   N  SW +                          
Sbjct: 170 RNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGT-------------------------- 203

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
                    ++SG+   G+Y     L   M+   +     + + +++A   L ++  GR+
Sbjct: 204 ---------IISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQ 254

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H   ++ GL  D++V  +L+DMY K   L++A  VFD M ++ IV WNS+I+GY   G 
Sbjct: 255 LHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGY 314

Query: 614 FVNAKKMLNQMEEEEIKP-----------------------------------DLVSWNS 638
              A  + ++M +  +K                                    D+V+  +
Sbjct: 315 SEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTA 374

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           LV  YS WG+  +A  +   M       N+++W +LI+G   + +  E++  F +M +E 
Sbjct: 375 LVDFYSKWGKVDDARHVFDRMSCR----NIISWNALIAGYGNHGHGEEAIDMFEKMLREG 430

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD-AYVATGLIDMYSKSGNLKSA 757
           + PN  T  ++L  C   GL + G EI     ++  +K  A     +I++  + G L  A
Sbjct: 431 MMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEA 490

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             + RK+                                   FQP A  + ALL AC+  
Sbjct: 491 YALIRKAP----------------------------------FQPTANMWAALLRACRVH 516

Query: 818 GLVEEGWKYFDSMSTDYNIIP-TIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           G +E G    + +   Y + P  + +Y  ++++   +G L EA D  +T+  K
Sbjct: 517 GNLELGKFAAEKL---YGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRK 566



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 13/291 (4%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQEL---LEVWGEL 285
           M   ++  +++ G    A + F    +R+   W + +  Y   G  V+     + +  E 
Sbjct: 169 MRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEF 228

Query: 286 HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
           +  G     R    +++    L   + G ++H+  IK G   D+ + CAL++ Y KC  +
Sbjct: 229 YDCG----PRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSL 284

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           E A+ +F E+ D +  + WN II     +   E A+ L+ EM+ S  K    T   +++ 
Sbjct: 285 EDAHCVFDEMPD-KTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRI 343

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
           C+++ +    KQ+H  ++++    ++     L+  YS+  K++ A  VFD M   N+ SW
Sbjct: 344 CSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISW 403

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITW-----NCLLSGHFTHG 511
           N++I+ Y   G+ + A  +F KM    + P+ +T+      C +SG F  G
Sbjct: 404 NALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERG 454



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 45/334 (13%)

Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTT 705
           G  KE  +   H+K S      V   S I   +  + YR++L+ F   + ED      +T
Sbjct: 80  GDRKETPLKETHVKKSS-----VGICSQIEKLVLCKKYRDALEMFEIFELEDGFHVGYST 134

Query: 706 MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
             +L+  C GL  ++  K +    + NGF  D Y+   ++ M+ K G +  A  +F +  
Sbjct: 135 YDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMP 194

Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
            +   SW  +I G+   GN  EA  LF  + E  +     TF  ++ A     ++  G +
Sbjct: 195 ARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPG-R 253

Query: 826 YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI--WGALLGSCR 883
              S +    +   I     ++D+  K G L++A      M   PD TI  W +++    
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEM---PDKTIVGWNSIIAGYA 310

Query: 884 IHGHLE-----YAEIAS-----------------RRLFKLEPCNSANYNLMMN------- 914
           +HG+ E     Y E+                    RL  +      + +L+ N       
Sbjct: 311 LHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVV 370

Query: 915 ----LLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
               L+   ++W  V+  RH  D +  ++++ W+
Sbjct: 371 ANTALVDFYSKWGKVDDARHVFDRMSCRNIISWN 404


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 241/826 (29%), Positives = 395/826 (47%), Gaps = 87/826 (10%)

Query: 211  KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAF-FLYFSRSYAD----WSSFL 265
            ++ HA ++ MG + +   +  SLI  Y++ G   SA + F  +  SR  A     W+  +
Sbjct: 461  RTIHASIVTMG-LQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVI 519

Query: 266  EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
            + Y  +G   +E L  +  +   G+      L+I+L +C +L  +  G ++H  +I+  F
Sbjct: 520  DGYFKYG-HFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMF 578

Query: 326  DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
            + D +L+ AL+  Y  C     A  LF ++ +  + + WN +I   + N  WE +++L+ 
Sbjct: 579  EGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYS 638

Query: 386  EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
              +  + K +S +      AC+       G+Q+H  V+K   + +  VC  L++MY+++ 
Sbjct: 639  LAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSG 698

Query: 446  KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
             +E A +VFD + D  +   N+MIS++ G G    A  L+NKM +     D  T + LLS
Sbjct: 699  SVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLS 758

Query: 506  GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            G    GSY                                    +GR  H  +++  +  
Sbjct: 759  GCSVVGSYD-----------------------------------FGRTVHAEVIKRSMQS 783

Query: 566  DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
            ++ + ++L+ MY K    ++A  VF  MK R++VAW S+I+G+C    F +A  +   ME
Sbjct: 784  NVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAME 843

Query: 626  EEEIKPD------LVSWN-----------------------------SLVSGYSIWGQSK 650
            +E +K D      ++S                               SLV  YS +G ++
Sbjct: 844  KEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAE 903

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
             A ++   M N     N+V W S+IS    N     S+    Q+ Q     +S +++++L
Sbjct: 904  SAEMVFSSMPNK----NLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVL 959

Query: 711  QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
                 +  L  GK +H   ++     D  V   LIDMY K G LK A+ +F     + L 
Sbjct: 960  VAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLV 1019

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            +WN MI G+  +GN +EA+ LF E+  +   PD +TF AL+ +C +SG+VEEG   F  M
Sbjct: 1020 TWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLM 1079

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
              +Y + P +EHY+ +VDLLG+AG LD+A+ FIR MP   D ++W  LL +CR H ++E 
Sbjct: 1080 RIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMEL 1139

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             E+ +  L K+EP   +NY  ++NL      W+    LR SM   G+K     SWI++  
Sbjct: 1140 GELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKN 1199

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
             V VF +  +      EIY  L  L S M+  G      C Y+ I+
Sbjct: 1200 RVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG------CSYEGIE 1239



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 165/636 (25%), Positives = 301/636 (47%), Gaps = 75/636 (11%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +LK C  L   + G  +HAS++  G   D ++  +L+N Y KC  + SA ++F ++S+  
Sbjct: 447  LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 506

Query: 360  DD----LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            D      +WN +I    +   +E  +  F  MQ    +    ++  +L  C ++  +  G
Sbjct: 507  DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAG 566

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            +QIHGY++++  E +  +   LI MYS  ++               + +W+         
Sbjct: 567  RQIHGYIIRNMFEGDPYLETALIGMYSSCSR--------------PMEAWS--------- 603

Query: 476  GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
                    LF K+ +   + +I+ WN ++ G   +G ++  L L    ++   +   +S 
Sbjct: 604  --------LFGKLEN---RSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
            +    A +   +L +GR+ H  +++     D YV TSL+ MY K+  +++A++VFD + +
Sbjct: 653  TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712

Query: 596  RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQSK 650
            + +   N++IS +   G   +A  + N+M+  E   D  + +SL+SG S+     +G++ 
Sbjct: 713  KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTV 772

Query: 651  EALVIIHHMK----------------------NSGIYP----NVVTWTSLISGSLQNENY 684
             A VI   M+                      +S  Y     +VV W S+I+G  QN  +
Sbjct: 773  HAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRF 832

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
            +++L  F  M++E +K +S  M+S++    GL  ++ G  IH   +K G   D +VA  L
Sbjct: 833  KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 892

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
            +DMYSK G  +SA  VF    NK L +WN MI  ++  G  + +I L  ++L+ GF  D+
Sbjct: 893  VDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDS 952

Query: 805  ITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIR 864
            ++ T +L A  +   + +G K   +      I   ++  + ++D+  K G L  A     
Sbjct: 953  VSITTVLVAVSSVAALLKG-KTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFE 1011

Query: 865  TMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
             MP + +   W +++     HG+ E A     RLFK
Sbjct: 1012 NMP-RRNLVTWNSMIAGYGSHGNCEEA----VRLFK 1042



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 241/553 (43%), Gaps = 73/553 (13%)

Query: 366 EIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS 425
           E I   ++  K+  A++L  +   S+      T   +L+ CA +   + G+ IH  ++  
Sbjct: 411 EEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTM 470

Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
            L+S+  +   LI+MY +   L  A +VFD M +   S+                     
Sbjct: 471 GLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSA--------------------- 509

Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
                    PDI  WN ++ G+F +G ++  L     MQ LG RP+G S+S+VL     L
Sbjct: 510 ---------PDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRL 560

Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSL 604
                GR+ HGYI+RN  + D Y+ T+L+ MY        A  +F  ++NR NIVAWN +
Sbjct: 561 SWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVM 620

Query: 605 ISGYCFKGLFVNAKKMLNQMEEE--------------------------EIKPDLVSWN- 637
           I G+   G++  + ++ +  + E                          ++  D++  N 
Sbjct: 621 IGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNF 680

Query: 638 --------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
                   SL++ Y+  G  ++A  +   + +      V    ++IS  + N    ++L 
Sbjct: 681 QDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDK----EVELRNAMISAFIGNGRAYDALG 736

Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
            + +M+  +   +S T+SSLL  C  +G    G+ +H   +K     +  + + L+ MY 
Sbjct: 737 LYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYY 796

Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
           K G+ + A  VF     + + +W  MI GF      K+A+ LF  + + G + D+   T+
Sbjct: 797 KCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTS 856

Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
           +++A      VE G       +    +   +     +VD+  K G+ + A     +MP K
Sbjct: 857 VISAGLGLENVELG-HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNK 915

Query: 870 PDATIWGALLGSC 882
            +   W +++ SC
Sbjct: 916 -NLVAWNSMI-SC 926


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 206/584 (35%), Positives = 308/584 (52%), Gaps = 42/584 (7%)

Query: 530  PNGSSVSVVLQAVTELRL---LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            PN S ++  +   +  RL   L+ G + H   L+     + +V TSL+ +Y +   L  A
Sbjct: 66   PNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRA 125

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------LVSW 636
            Q VFD M + + V+W +LI+ Y   G    A  +        ++PD              
Sbjct: 126  QRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARV 185

Query: 637  NSLVSGYSIW-------------------------GQSKEALVIIHHMKNSGIYPNVVTW 671
              L +G ++W                         G+  +A  +   M++     + V W
Sbjct: 186  ADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDK----DAVAW 241

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             +++ G   N + RE+L  F+ MQ E ++P+   ++  L  C  LG L  G++   +   
Sbjct: 242  GAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDW 301

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            + F+ +  + T LIDMY+K G+   A  VF++   K +  WN MI+G  + G+ K A  L
Sbjct: 302  DEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTL 361

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
              ++ ++G + +  TF  LL +C ++GL+++G +YF +M+  Y+I P IEHY C+VDLL 
Sbjct: 362  IGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLS 421

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L EA   I  MP   +A I GALLG C+IH + E AE    +L +LEP NS NY +
Sbjct: 422  RAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVM 481

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ +   RWED  +LR  M E GV+ V   SW++ +  VH F      HP + +IY +
Sbjct: 482  LSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKK 541

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            L  L  EMK +GY P T  V  D+++EEK   L+ H+EKLAI + L+ T     IRV KN
Sbjct: 542  LDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKN 601

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVCSDCHTA K +S +  REI +RD  RFH FR+G CSCND W
Sbjct: 602  LRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/405 (22%), Positives = 164/405 (40%), Gaps = 79/405 (19%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+Q+H   LK    +N  V   L+++Y+R   L  A RVFD M                 
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMP---------------- 133

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                               P  ++W  L++ +   G  +  + + R   + G RP+  +
Sbjct: 134 -------------------HPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFT 174

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
              VL A   +  L  G        + G+   ++V T+ +D+YVK   +  A+EVFD M+
Sbjct: 175 AVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMR 234

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------- 632
           +++ VAW +++ GY   G    A  +   M+ E ++PD                      
Sbjct: 235 DKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ 294

Query: 633 ---LVSWN----------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
              +V W+          +L+  Y+  G + EA V+   M+      +++ W ++I G  
Sbjct: 295 AIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKK----DIIVWNAMILGLG 350

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
              + + +     QM++  +K N  T   LL +C   GL+Q+G+       K   I    
Sbjct: 351 MTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 410

Query: 740 VATG-LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
              G ++D+ S++G L+ A ++     +      N +I+G  + G
Sbjct: 411 EHYGCIVDLLSRAGLLQEAHQLI----DDMPMPANAVILGALLGG 451



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/402 (21%), Positives = 168/402 (41%), Gaps = 40/402 (9%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++HA  +K     + H+  +L+  Y +C  +  A ++F E+      + W  +I   +
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPH-PSTVSWTALITAYM 148

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
                  A+ + R    +  +  S T V++L ACA+V     G+ +     +  +  ++ 
Sbjct: 149 DAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVF 208

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V    + +Y +  ++  A  VFD M+D +  +W +M+  Y   G+   A  LF  M    
Sbjct: 209 VATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAM---- 264

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                                          Q+ G RP+  +V+  L A T L  L  GR
Sbjct: 265 -------------------------------QAEGVRPDCYAVAGALSACTRLGALDLGR 293

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           ++   +  +    +  +GT+L+DMY K      A  VF  M+ ++I+ WN++I G    G
Sbjct: 294 QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTG 353

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
               A  ++ QME+  +K +  ++  L+   +  G  ++     H+M K   I P +  +
Sbjct: 354 HEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHY 413

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++    +    +E+ +    M    +  N+  + +LL  C
Sbjct: 414 GCIVDLLSRAGLLQEAHQLIDDMP---MPANAVILGALLGGC 452



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 117/281 (41%), Gaps = 3/281 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA+ +K+    N   ++ SL+  Y   G    A + F      S   W++ +  Y    G
Sbjct: 94  HARSLKLPSHTNPH-VLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD-AG 151

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           +++E + V       G+   S     +L  C ++     G  V  +  + G    V +  
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 211

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A ++ Y KC ++  A ++F ++ D +D + W  ++     N     A+ LF  MQ    +
Sbjct: 212 AAVDLYVKCGEMAKAREVFDKMRD-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 270

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                +   L AC ++GA   G+Q    V       N  +   LI MY++      A  V
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVV 330

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           F  M+  ++  WN+MI      G+   A++L  +M  S ++
Sbjct: 331 FQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVK 371


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080-like
            [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080-like
            [Cucumis sativus]
          Length = 667

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 211/602 (35%), Positives = 312/602 (51%), Gaps = 62/602 (10%)

Query: 536  SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---------------- 579
            S +LQ+  +L  L  G++ H  I+ +G   D ++   L++ Y K                
Sbjct: 66   SHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPR 125

Query: 580  ----------NDCLQ-----NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
                      N  LQ     +AQ++FD M  RNI  WN++I+G         A  +  +M
Sbjct: 126  RNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEM 185

Query: 625  EEEEIKPDLVSWNSLVSGYS-----IWGQSKEALVI--------------IHHMKNSGIY 665
                  PD  +  S++ G +     + GQ   A ++               H    SG  
Sbjct: 186  YGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSL 245

Query: 666  PN------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +            VV W +LI+G  QN    E L  +  M+    +P+  T  S+L  C
Sbjct: 246  SDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSAC 305

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWN 773
              L  L  G++IH   +K G      V + LI MYS+SG L+ + + F    N  +  W+
Sbjct: 306  SELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWS 365

Query: 774  CMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD 833
             MI  +  +G G+EA+ LFH++ +   + + +TF +LL AC +SGL E+G +YFD M   
Sbjct: 366  SMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKK 425

Query: 834  YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEI 893
            Y + P IEHY+C+VDLLG+AG L+EA   IR+MP +PD  IW  LL +C++H   E AE 
Sbjct: 426  YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAER 485

Query: 894  ASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVH 953
             S  + KL+P ++A+Y L+ N+ A +  W +V ++R +M +  V+     SW+++  +VH
Sbjct: 486  ISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVH 545

Query: 954  VFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAI 1013
             FS     HP   EI   L  L+SE+K+ GYVP+   V  D+D EEK   L  H+EK AI
Sbjct: 546  QFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAI 605

Query: 1014 VYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
             + LM T    PIRV+KN RVC DCH A K +S +R REI +RD +RFHHF++GECSC +
Sbjct: 606  AFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGN 665

Query: 1074 CW 1075
             W
Sbjct: 666  YW 667



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 202/446 (45%), Gaps = 70/446 (15%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ+C K+G+   GKQ+H  ++ S    +  + N L++ YS+  + + +  +F +M   N
Sbjct: 68  LLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRN 127

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           + S+N +I+ Y  LG ++ A  LF++M+    + +I TWN +++G       +  L+L +
Sbjct: 128 VMSFNILINGYLQLGDLESAQKLFDEMS----ERNIATWNAMIAGLTQFEFNKQALSLFK 183

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M  LGF P+  ++  VL+    LR L  G+E H  +L+ G +    VG+SL  MY+K+ 
Sbjct: 184 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSG 243

Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
            L + +++  +M  R +VAWN+LI+G    G         N M+    +PD +++ S++S
Sbjct: 244 SLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLS 303

Query: 642 GYSIW-----GQSKEALVI--------------IHHMKNSGIYP------------NVVT 670
             S       GQ   A VI              I     SG               +VV 
Sbjct: 304 ACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVL 363

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           W+S+I+    +    E+L+ F QM+   ++ N  T  SLL  C   GL + G E   L +
Sbjct: 364 WSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMV 423

Query: 731 KNGFIKDAYVA-TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
           K   +K      T ++D+  ++G L+ A  + R                           
Sbjct: 424 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRS-------------------------- 457

Query: 790 LLFHELLETGFQPDAITFTALLAACK 815
                      QPD I +  LLAACK
Sbjct: 458 --------MPVQPDGIIWKTLLAACK 475



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 139/272 (51%), Gaps = 2/272 (0%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  YL+ GD  SA K F     R+ A W++ +     F    Q L  ++ E++G G + 
Sbjct: 134 LINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQAL-SLFKEMYGLGFLP 192

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               L  +L+ C  L +   G EVHA L+K GF+    +  +L + Y K   +    KL 
Sbjct: 193 DEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLI 252

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             +  +   + WN +I  K +N   E  +  +  M+ +  +    T V +L AC+++   
Sbjct: 253 KSMP-IRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATL 311

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
            +G+QIH  V+K+   S L+V + LISMYSR+  LE + + F   ++ ++  W+SMI++Y
Sbjct: 312 GQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAY 371

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
              G  + A  LF++M   +++ + +T+  LL
Sbjct: 372 GFHGRGEEALELFHQMEDLKMEANEVTFLSLL 403



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 197/450 (43%), Gaps = 71/450 (15%)

Query: 296 ILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK-------------- 341
           + + +L+ C KL + + G +VH+ +I  G   D  +   L+NFY K              
Sbjct: 64  LFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNM 123

Query: 342 -----------------CRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
                              D+ESA KLF E+S+  +   WN +I    + E  + A+ LF
Sbjct: 124 PRRNVMSFNILINGYLQLGDLESAQKLFDEMSE-RNIATWNAMIAGLTQFEFNKQALSLF 182

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           +EM          T+  +L+ CA + +   G+++H  +LK   E +  V + L  MY ++
Sbjct: 183 KEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 242

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             L    ++  SM    + +WN++I+     G  +   + +N M  +  +PD IT+    
Sbjct: 243 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITF---- 298

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
                                         VS VL A +EL  L  G++ H  +++ G  
Sbjct: 299 ------------------------------VS-VLSACSELATLGQGQQIHAEVIKAGAS 327

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
             L V +SL+ MY ++ CL+++ + F + +N ++V W+S+I+ Y F G    A ++ +QM
Sbjct: 328 SVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQM 387

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNEN 683
           E+ +++ + V++ SL+   S  G  ++       M K   + P +  +T ++    +   
Sbjct: 388 EDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGR 447

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             E+      M    ++P+     +LL  C
Sbjct: 448 LEEAEGMIRSM---PVQPDGIIWKTLLAAC 474



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 35/215 (16%)

Query: 698 DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK------- 750
           +I  + +  S LLQ+C  LG L  GK++H L + +G  KD +++  L++ YSK       
Sbjct: 57  EIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSS 116

Query: 751 ------------------------SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
                                    G+L+SA+++F + + + +A+WN MI G   +   K
Sbjct: 117 LVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNK 176

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDS-MSTDYNIIPTIEHYSC 845
           +A+ LF E+   GF PD  T  ++L  C     +  G +     +   + +   +   S 
Sbjct: 177 QALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVG--SS 234

Query: 846 MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
           +  +  K+G L +    I++MP +     W  L+ 
Sbjct: 235 LAHMYIKSGSLSDGEKLIKSMPIRT-VVAWNTLIA 268


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 755

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 214/715 (29%), Positives = 369/715 (51%), Gaps = 81/715 (11%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +LQ C       E + IHG+++K+    +L V   L+++YS+   +E A +VFD++   N
Sbjct: 70   LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            +++W ++++     GYV  +  L                                L L  
Sbjct: 130  VNAWTTLLT-----GYVQNSHPLL------------------------------ALQLFI 154

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M   G  P+  ++ +VL A + L+ +++G++ H Y+++  +D+D  +G SL   Y K  
Sbjct: 155  KMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFR 214

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             L+ A + F  +K +++++W S+IS  C  G    +      M  + +KP+  +  S++S
Sbjct: 215  RLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLS 274

Query: 642  GYSIW-----GQSKEALVIIHH------MKNSGIYP--------------------NVVT 670
               +      G    +L I         +KNS +Y                     N+VT
Sbjct: 275  ACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVT 334

Query: 671  WTSLISGSLQNENYRE-----------SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
            W ++I+G  +  +  E           +L  F ++ +  +KP+  T SS+L  C  L  L
Sbjct: 335  WNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVAL 394

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
            + G++IH   +K+G + D  V T L+ MY+K G++  A + F +  ++T+ SW  MI GF
Sbjct: 395  EQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGF 454

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A +G  ++A+ LF ++   G +P+ +TF  +L+AC ++GL +E   YF+ M   YNI P 
Sbjct: 455  ARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPV 514

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            ++H++C++D+  + G ++EA+D +  M F+P+ TIW  L+  CR HG  +    A+ +L 
Sbjct: 515  MDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLL 574

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            KL+P +   Y  ++N+   + RW+DV ++R  M E  V  +  WSWI I + V+ F    
Sbjct: 575  KLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPND 634

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS---HTEKLAIVYG 1016
              H  + E+Y  L  +++E+K LGY P    V     EE + +VL S   H+EKLAI +G
Sbjct: 635  KSHCQSLEMYKLLETVLNEVKALGYEP-IEDVEVIEKEENEERVLSSTVLHSEKLAIAFG 693

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            L+   +  PIRV+K+  +C DCH   +++SL++GREI +RD  + H F  G CSC
Sbjct: 694  LLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSC 748



 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 159/628 (25%), Positives = 280/628 (44%), Gaps = 54/628 (8%)

Query: 195 FCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLY 253
           F  L E       +  +  H  ++K G  ++ D  V + + + Y + G   SA K F   
Sbjct: 68  FPLLQECIDRNLATEARMIHGHIVKTG--FHEDLFVMTFLVNVYSKCGVMESAHKVFDNL 125

Query: 254 FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLG 313
             R+   W++ L  Y      +  L +++ ++   G    +  L I+L  C+ L +   G
Sbjct: 126 PRRNVNAWTTLLTGYVQNSHPLLAL-QLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 184

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            +VHA LIK   DFD  +  +L +FY K R +E A K F  + + +D + W  +I     
Sbjct: 185 KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE-KDVISWTSVISSCCD 243

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N +   ++  F +M     K    T+  +L AC  +     G QIH   +K    S++ +
Sbjct: 244 NGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILI 303

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N ++ +Y +   L  A ++F+ M+  NL +WN+MI+ +  +  +D+A            
Sbjct: 304 KNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKM--MDLA------------ 349

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           + D+            H S    L + + +   G +P+  + S VL   + L  L+ G +
Sbjct: 350 EDDVA----------AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQ 399

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG I+++G+  D+ VGT+L+ MY K   +  A + F  M +R +++W S+I+G+   GL
Sbjct: 400 IHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGL 459

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWT 672
              A ++   M    IKP+ V++  ++S  S  G + EAL     M K   I P +  + 
Sbjct: 460 SQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFA 519

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG--KEIHCLCL 730
            LI   L+     E+   F  + + + +PN T  S L+  C   G    G       L L
Sbjct: 520 CLIDMYLRLGRVEEA---FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKL 576

Query: 731 KNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWNCMIMGFAIYG---N 784
           K    KD      L++M+  +G   ++   R++ ++     L  W+ + +   +Y    N
Sbjct: 577 KP---KDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPN 633

Query: 785 GKEAI--LLFHELLET--------GFQP 802
            K     L  ++LLET        G++P
Sbjct: 634 DKSHCQSLEMYKLLETVLNEVKALGYEP 661



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 138/545 (25%), Positives = 243/545 (44%), Gaps = 91/545 (16%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H  ++K GF  D+ +   L+N Y KC  +ESA+K+F  +     +  W  ++   ++N 
Sbjct: 86  IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNA-WTTLLTGYVQNS 144

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
               A++LF +M  + A   + T+  +L AC+ + +   GKQ+H Y++K  ++ + S+ N
Sbjct: 145 HPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGN 204

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L S YS+  +LE A + F  +K+ ++ SW S+ISS    G    + S F  M S     
Sbjct: 205 SLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSD---- 260

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                                          G +PN  +++ VL A   +  L  G + H
Sbjct: 261 -------------------------------GMKPNEYTLTSVLSACCVMLTLDLGAQIH 289

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC----FK 611
              ++ G    + +  S+M +Y+K   L  AQ++F+ M+  N+V WN++I+G+       
Sbjct: 290 SLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLA 349

Query: 612 GLFVNAKK-------MLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQSKEALV 654
              V A K       M  ++    +KPDL +++S++S          G  I GQ  ++ V
Sbjct: 350 EDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGV 409

Query: 655 IIHHMKNSGIYP---------------------NVVTWTSLISGSLQNENYRESLKFFIQ 693
           +   +  + +                        +++WTS+I+G  ++   +++L+ F  
Sbjct: 410 LADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFED 469

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK---DAYVATGLIDMYSK 750
           M+   IKPN  T   +L  C   GL         L  K   IK   D +    LIDMY +
Sbjct: 470 MRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFAC--LIDMYLR 527

Query: 751 SGNLKSAREVFRK---SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP-DAIT 806
            G ++ A +V  K     N+T+  W+ +I G   +G          +LL+   +P D  T
Sbjct: 528 LGRVEEAFDVVHKMNFEPNETI--WSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVET 583

Query: 807 FTALL 811
           + +LL
Sbjct: 584 YVSLL 588



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 186/407 (45%), Gaps = 52/407 (12%)

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
           LG R   S    +LQ   +  L    R  HG+I++ G   DL+V T L+++Y K   +++
Sbjct: 58  LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 117

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFK-------------------------GLFVNAKKM 620
           A +VFDN+  RN+ AW +L++GY                            G+ +NA   
Sbjct: 118 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 177

Query: 621 LNQME----------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
           L  +E          +  I  D    NSL S YS + + + A+     +K      +V++
Sbjct: 178 LQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEK----DVIS 233

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           WTS+IS    N     SL FF+ M  + +KPN  T++S+L  C  +  L  G +IH L +
Sbjct: 234 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSI 293

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG-----------F 779
           K G+     +   ++ +Y K G L  A+++F       L +WN MI G            
Sbjct: 294 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 353

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
           A + +G  A+ +F +L  +G +PD  TF+++L+ C N   +E+G +    +     ++  
Sbjct: 354 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI-IKSGVLAD 412

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           +   + +V +  K G +D+A      MP +   + W +++     HG
Sbjct: 413 VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARHG 458


>gi|413941673|gb|AFW74322.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
          Length = 1028

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 232/777 (29%), Positives = 384/777 (49%), Gaps = 69/777 (8%)

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A K+F  ++   D L W+ +I        +E  + L   M           I ++LQACA
Sbjct: 118  ARKVFEGMA-CRDLLAWSAMIGAYAIRGLYEEVVALAVAMVREGVIPDRFLITRILQACA 176

Query: 408  KVGAFHEGKQIHGYVLKSALES----NLSVCNCLISMY---------------------- 441
                   G  +H   ++    +    ++ V N +++MY                      
Sbjct: 177  YTEDLELGTAMHSLAIRRGFMAEGARDVPVGNSVLAMYVKCGELGRARAAFDMMGQRDLC 236

Query: 442  ---------SRNNKLELATRVFDSMK----DHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
                      R+N+ E A R+ D M+    +  L +WN+++SSY   G +DVA  +  +M
Sbjct: 237  TWNSMIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQM 296

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQN-VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
              S + PD++TW  L+SG F HG      L     M+  G  PNG +++  + A   LRL
Sbjct: 297  EESGVAPDVVTWTSLVSG-FVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRL 355

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L  G E H + ++ G   ++  G SL+DMY K   +  A+ VFD +  ++I +WNS+++G
Sbjct: 356  LSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIPEKDIFSWNSMVAG 415

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
            Y   G    A ++  +ME   ++ ++++WN ++SGY   G  + A  +   M++ G+  +
Sbjct: 416  YAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGYIRNGDDERAFELFQMMESCGVKRD 475

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
              +W +LI+GS+ N +   +L+ F QMQ   ++P+  T+ S++     L      +EIH 
Sbjct: 476  TASWNALIAGSVHNGHSDRALRIFWQMQSLLVRPDFITILSIIPAFANLAGFWKVREIHA 535

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
                N    D  +A  LI+ YSKSG+L  A  VF + +++ + SWNC+I+   ++G+  E
Sbjct: 536  CIYHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSRNIISWNCIILAHLLHGSPSE 595

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+  F E+ + G +PD  T TA++ A    G V E  + F +M+ DYNIIP ++HY+ +V
Sbjct: 596  ALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKRIFHNMTHDYNIIPDLDHYTAIV 655

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG++G L EA++FI  MP  P+  +W ALL +  IHG+   A + +R L  L+P +  
Sbjct: 656  DLLGRSGSLQEAYEFIGNMPLIPNLAVWEALLTAATIHGNARLANLTARELSSLDPSDPR 715

Query: 908  NYNLMMNLLAMSNRWEDVERLR-----HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
               L+ N   ++ +  DV  +        +++V   SV      +I   V++FS      
Sbjct: 716  IQRLVFNYWGLTGKSVDVPLMTVYNGGRELEDVDSCSV------EIKNNVYLFS------ 763

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS-----HTEKLAIVYGL 1017
              TG+    L   V+E+K +  +   R    +I  E   +         H EKLAI + +
Sbjct: 764  --TGD-NLALESTVAELKLI--MIQIRMSLLNISNETNAEEEKEELSGIHCEKLAIAFAI 818

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
              +     IR+IK  R+CS CH  AK +S    R+I ++D    H F +G+CSC  C
Sbjct: 819  SNSPPFRSIRIIKTLRMCSHCHIFAKLVSEKYERQILIKDSNCLHKFEDGKCSCEAC 875



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 200/400 (50%), Gaps = 39/400 (9%)

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+++S   +L  A +VF+ M   +L +W++MI +Y                        
Sbjct: 105 LITVHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYA----------------------- 141

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
                         G Y+ V+ L   M   G  P+   ++ +LQA      L+ G   H 
Sbjct: 142 ------------IRGLYEEVVALAVAMVREGVIPDRFLITRILQACAYTEDLELGTAMHS 189

Query: 557 YILRNGL----DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             +R G       D+ VG S++ MYVK   L  A+  FD M  R++  WNS+I G C   
Sbjct: 190 LAIRRGFMAEGARDVPVGNSVLAMYVKCGELGRARAAFDMMGQRDLCTWNSMIFGCCRSN 249

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
            +  A+++L+ M  +  +P LV+WN+LVS Y+  G+   A+ ++  M+ SG+ P+VVTWT
Sbjct: 250 EWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQMEESGVAPDVVTWT 309

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           SL+SG +  +   E+L  F +M+   ++PN  T++S +  C  L LL  G E+HC  +K 
Sbjct: 310 SLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHAIKV 369

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
           G + +      L+DMY+K G + +A+ VF +   K + SWN M+ G+A  G   +A  LF
Sbjct: 370 GSVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIPEKDIFSWNSMVAGYAQAGYCGKAYELF 429

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            E+   G + + IT+  +++    +G  E  ++ F  M +
Sbjct: 430 CEMESLGVRRNVITWNIMISGYIRNGDDERAFELFQMMES 469



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 196/420 (46%), Gaps = 52/420 (12%)

Query: 335 LMNFYGKCRDVESANKLFSEVSD---LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
           L++ Y +  +++ A ++  ++ +     D + W  ++   +  ++   A+  F  M+ + 
Sbjct: 276 LVSSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAG 335

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +    TI   + ACA +    +G ++H + +K    +N+   N L+ MY++  ++  A 
Sbjct: 336 VEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIIAAK 395

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           RVFD + + ++ SWNSM++ Y   GY   A+ LF +M S  ++ ++ITWN ++SG+  +G
Sbjct: 396 RVFDEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGYIRNG 455

Query: 512 SYQNVLTLLRGMQSLG-----------------------------------FRPNGSSVS 536
             +    L + M+S G                                    RP+  ++ 
Sbjct: 456 DDERAFELFQMMESCGVKRDTASWNALIAGSVHNGHSDRALRIFWQMQSLLVRPDFITIL 515

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            ++ A   L      RE H  I  N L+ D  +  +L++ Y K+  L  A  VFD   +R
Sbjct: 516 SIIPAFANLAGFWKVREIHACIYHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSR 575

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           NI++WN +I  +   G    A     +M++E ++PD  +  +++  Y + G+  EA  I 
Sbjct: 576 NIISWNCIILAHLLHGSPSEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKRIF 635

Query: 657 HHMKNS-GIYPNVVTWTSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           H+M +   I P++  +T+++     SGSLQ     E+ +F   M    + PN     +LL
Sbjct: 636 HNMTHDYNIIPDLDHYTAIVDLLGRSGSLQ-----EAYEFIGNMP---LIPNLAVWEALL 687



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 188/443 (42%), Gaps = 69/443 (15%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +  +   G    E L  +  +   GV      +   +  C  L     G+E+H   
Sbjct: 308 WTSLVSGF-VHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHA 366

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           IK G   +V    +L++ Y KC ++ +A ++F E+ + +D   WN ++    +      A
Sbjct: 367 IKVGSVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIPE-KDIFSWNSMVAGYAQAGYCGKA 425

Query: 381 IKLFREMQFSSAKAISRTIVK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            +LF EM+   +  + R ++    M+    + G      ++   +    ++ + +  N L
Sbjct: 426 YELFCEME---SLGVRRNVITWNIMISGYIRNGDDERAFELFQMMESCGVKRDTASWNAL 482

Query: 438 ISMYSRNNKLELATRVFDSMKD-----------------HNLSSW--------------- 465
           I+    N   + A R+F  M+                   NL+ +               
Sbjct: 483 IAGSVHNGHSDRALRIFWQMQSLLVRPDFITILSIIPAFANLAGFWKVREIHACIYHNNL 542

Query: 466 -------NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
                  N++I++Y+  G +  A ++F++ +SSR   +II+WNC++  H  HGS    L 
Sbjct: 543 EMDGKIANALINAYSKSGDLAGACAVFDR-HSSR---NIISWNCIILAHLLHGSPSEALD 598

Query: 519 LLRGMQSLGFRPNGSSVSVVLQA------VTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
               M+  G RP+ ++++ V++A      V+E + + +   +H Y +   LD+     T+
Sbjct: 599 RFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKRI-FHNMTHDYNIIPDLDH----YTA 653

Query: 573 LMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAK-KMLNQMEEEEIK 630
           ++D+  ++  LQ A E   NM    N+  W +L++     G   NA+   L   E   + 
Sbjct: 654 IVDLLGRSGSLQEAYEFIGNMPLIPNLAVWEALLTAATIHG---NARLANLTARELSSLD 710

Query: 631 PDLVSWNSLVSGYSIWGQSKEAL 653
           P       LV  Y  WG + +++
Sbjct: 711 PSDPRIQRLVFNY--WGLTGKSV 731



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 44/247 (17%)

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
           T LI ++S +G L  AR+VF   A + L +W+ MI  +AI G  +E + L   ++  G  
Sbjct: 103 TKLITVHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYEEVVALAVAMVREGVI 162

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
           PD    T +L AC  +  +E G                    + M  L  + G++ E   
Sbjct: 163 PDRFLITRILQACAYTEDLELG--------------------TAMHSLAIRRGFMAEG-- 200

Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
                    D  +  ++L      G L  A  A   + + + C    +N M+     SN 
Sbjct: 201 -------ARDVPVGNSVLAMYVKCGELGRARAAFDMMGQRDLC---TWNSMIFGCCRSNE 250

Query: 922 WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
           WE+  RL   M   G +  LV +W   + +V  ++        +GE+   +  ++ +M++
Sbjct: 251 WEEARRLLDDMRRQGTEPGLV-TW---NTLVSSYA-------RSGELDVAM-EMLEQMEE 298

Query: 982 LGYVPDT 988
            G  PD 
Sbjct: 299 SGVAPDV 305


>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 174/412 (42%), Positives = 260/412 (63%), Gaps = 4/412 (0%)

Query: 667  NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            N+  W  LI G   N  Y  +++ + QM    + P++ T   +L+ C  L  +++G+EIH
Sbjct: 140  NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT---LASWNCMIMGFAIYG 783
               ++ G+ KD +V   LIDMY+K G + SAREVF K   +    + SWN MI G+A++G
Sbjct: 200  EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHG 259

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
            +  EA+ LF E+     +PD ITF  +L+AC + GL+EEGW +F++M  DY I PT++HY
Sbjct: 260  HATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHY 318

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +CMVDLLG +G LDEA++ I  M   PD+ +WGALL SC+IH ++E  EIA  RL +LEP
Sbjct: 319  TCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEP 378

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             ++ NY ++ N+ A + +WE V +LR  M +  +K  +  SWI++   VH F +    HP
Sbjct: 379  DDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHP 438

Query: 964  ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSR 1023
             + EIY EL  +   MK+ GY P T  V+ D++++EK  ++ SH+E+LAI +GL+ T   
Sbjct: 439  LSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPG 498

Query: 1024 APIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              + + KN R+C DCH A K++S +  REI +RD  R+HHF++G CSC D W
Sbjct: 499  TRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 145/316 (45%), Gaps = 43/316 (13%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
           +LQ+C    A   GKQ+H  V  +    +  +   L+++Y   + L  A  +FD +  HN
Sbjct: 81  LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHN 140

Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
           +  WN +I  Y                           WN         G Y+  + L  
Sbjct: 141 IFLWNVLIRGY--------------------------AWN---------GPYEAAVQLYY 165

Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
            M   G  P+  +   VL+A   L  +++GRE H ++++ G + D++VG +L+DMY K  
Sbjct: 166 QMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCG 225

Query: 582 CLQNAQEVFDNMKNRN---IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           C+ +A+EVFD +  R+   +V+WN++I+GY   G    A  +  +M     KPD +++  
Sbjct: 226 CVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVG 284

Query: 639 LVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
           ++S  S  G  +E  +    M ++  I P V  +T ++     +    E+    +QM+  
Sbjct: 285 VLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMK-- 342

Query: 698 DIKPNSTTMSSLLQTC 713
            + P+S    +LL +C
Sbjct: 343 -VLPDSGVWGALLNSC 357



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 43/274 (15%)

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           + P  +  +SLLQ+C     ++ GK++H      GF  D  +AT L+++Y    +L SAR
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK--- 815
            +F +     +  WN +I G+A  G  + A+ L++++ + G  PD  TF  +L AC    
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 816 --------NSGLVEEGW------------------------KYFDSMSTDYNIIPTIEHY 843
                   +  +V+ GW                        + FD +     ++  +  +
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVL--VVSW 248

Query: 844 SCMVDLLGKAGYLDEAWDFIRTM--PFKPDATIWGALLGSCRIHGHLEYAEI---ASRRL 898
           + M+      G+  EA D    M    KPD   +  +L +C   G LE   +      R 
Sbjct: 249 NAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRD 308

Query: 899 FKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
           +K++P    +Y  M++LL  S R ++   L   M
Sbjct: 309 YKIDP-TVQHYTCMVDLLGHSGRLDEAYNLIMQM 341



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 41/317 (12%)

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
           +S    P  S+ + +LQ+    + +K G++ H  +   G  +D  + T L+++Y   D L
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
            +A+ +FD +   NI  WN LI GY + G +  A ++  QM +  + PD  ++  ++   
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 644 SIWGQSKEALVIIHHMKNSG-------------IYPN---------------------VV 669
           +     +    I  H+  +G             +Y                       VV
Sbjct: 187 AALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVV 246

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
           +W ++I+G   + +  E+L  F +M +   KP+  T   +L  C   GLL+ G       
Sbjct: 247 SWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGWMFFETM 305

Query: 730 LKNGFIKDAYVA--TGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAIYGNGK 786
           +++  I D  V   T ++D+   SG L  A   + +         W  ++    I+ N +
Sbjct: 306 IRDYKI-DPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVE 364

Query: 787 EAILLFHELLETGFQPD 803
              +    L+E   +PD
Sbjct: 365 LGEIALERLIE--LEPD 379



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 133/308 (43%), Gaps = 21/308 (6%)

Query: 156 NQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHA 215
           NQ      P+       S  L PT +       SCI+            + +   K  HA
Sbjct: 51  NQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIAR-----------KAIKPGKQLHA 99

Query: 216 QMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR-SYADWSSFLEDYESFGGE 274
           Q+   G  +  D ++ + + +     D  S+A+  F    + +   W+  +  Y ++ G 
Sbjct: 100 QVCLAG--FGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGY-AWNGP 156

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
            +  ++++ ++   G++  +     +LK C  L A   G E+H  +++ G++ DV +  A
Sbjct: 157 YEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAA 216

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLL---WNEIIMVKLRNEKWENAIKLFREMQFSS 391
           L++ Y KC  V SA ++F ++  + D +L   WN +I     +     A+ LF EM    
Sbjct: 217 LIDMYAKCGCVGSAREVFDKIL-VRDAVLVVSWNAMITGYAMHGHATEALDLFEEMN-RV 274

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELA 450
           AK    T V +L AC+  G   EG      +++   ++  +    C++ +   + +L+ A
Sbjct: 275 AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEA 334

Query: 451 TRVFDSMK 458
             +   MK
Sbjct: 335 YNLIMQMK 342


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Glycine max]
          Length = 658

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 203/565 (35%), Positives = 306/565 (54%), Gaps = 37/565 (6%)

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L  G + H  ++ +G D D ++ T L++MY +   +  A++VFD  + R I  WN+L   
Sbjct: 94   LSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRA 153

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWN-----SLVSGYSIWGQSKEALV---IIHHM 659
                G       +  QM    I  D  ++       +VS  S+    K   +   I+ H 
Sbjct: 154  LAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHG 213

Query: 660  KNSGIY---------------------------PNVVTWTSLISGSLQNENYRESLKFF- 691
              + I+                            N V+W+++I+   +NE   ++L+ F 
Sbjct: 214  YEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQ 273

Query: 692  -IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
             + ++  D  PNS TM ++LQ C GL  L+ GK IH   L+ G      V   LI MY +
Sbjct: 274  LMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGR 333

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             G +   + VF    N+ + SWN +I  + ++G GK+AI +F  ++  G  P  I+F  +
Sbjct: 334  CGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITV 393

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L AC ++GLVEEG   F+SM + Y I P +EHY+CMVDLLG+A  LDEA   I  M F+P
Sbjct: 394  LGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEP 453

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
              T+WG+LLGSCRIH ++E AE AS  LF+LEP N+ NY L+ ++ A +  W + + +  
Sbjct: 454  GPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMK 513

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
             ++  G++ +   SWI++ + V+ F +    +P   EI+  L  L +EMK  GYVP T  
Sbjct: 514  LLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNV 573

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
            V  D+DEEEK +++L H+EKLA+ +GL+ T     IR+ KN R+C DCH   K++S    
Sbjct: 574  VLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFAN 633

Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
            REI +RD  RFHHF++G CSC D W
Sbjct: 634  REILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 184/415 (44%), Gaps = 42/415 (10%)

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C +  +   G++VH  L+  GFD D  L   L+N Y +   ++ A K+F E  +     +
Sbjct: 88  CAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRE-RTIYV 146

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA----KVGAFHEGKQIH 419
           WN +          +  + L+ +M +    +   T   +L+AC      V    +GK+IH
Sbjct: 147 WNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIH 206

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            ++L+   E+N+ V   L+ +Y++   +  A  VF +M   N  SW++MI+ +       
Sbjct: 207 AHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPM 266

Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
            A  LF  M              +L  H +                    PN  ++  VL
Sbjct: 267 KALELFQLM--------------MLEAHDS-------------------VPNSVTMVNVL 293

Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
           QA   L  L+ G+  HGYILR GLD  L V  +L+ MY +   +   Q VFDNMKNR++V
Sbjct: 294 QACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVV 353

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
           +WNSLIS Y   G    A ++   M  +   P  +S+ +++   S  G  +E  ++   M
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESM 413

Query: 660 KNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
            +   I+P +  +  ++    +     E++K    M  E   P  T   SLL +C
Sbjct: 414 LSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFE---PGPTVWGSLLGSC 465



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 146/284 (51%), Gaps = 8/284 (2%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           +   LI  Y E G    A K F     R+   W++        G   +ELL+++ +++  
Sbjct: 115 LATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCG-KELLDLYVQMNWI 173

Query: 289 GVIFRSRILTIILKLCT----KLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
           G+       T +LK C      +     G E+HA +++ G++ ++H+   L++ Y K   
Sbjct: 174 GIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGS 233

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI--SRTIVKM 402
           V  AN +F  +   ++ + W+ +I    +NE    A++LF+ M   +  ++  S T+V +
Sbjct: 234 VSYANSVFCAMPT-KNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNV 292

Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
           LQACA + A  +GK IHGY+L+  L+S L V N LI+MY R  ++ +  RVFD+MK+ ++
Sbjct: 293 LQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDV 352

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            SWNS+IS Y   G+   A  +F  M      P  I++  +L  
Sbjct: 353 VSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGA 396



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 8/235 (3%)

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
           +LK  I +   +  P   T   L+ +C     L +G ++H   + +GF +D ++AT LI+
Sbjct: 62  NLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLIN 121

Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
           MY + G++  AR+VF ++  +T+  WN +    A+ G GKE + L+ ++   G   D  T
Sbjct: 122 MYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFT 181

Query: 807 FTALLAACKNSGL----VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           +T +L AC  S L    +++G K   +    +     I   + ++D+  K G +  A   
Sbjct: 182 YTFVLKACVVSELSVSPLQKG-KEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA-NYNLMMNLL 916
              MP K +   W A++ +C     +    +   +L  LE  +S  N   M+N+L
Sbjct: 241 FCAMPTK-NFVSWSAMI-ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVL 293


>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 621

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 204/604 (33%), Positives = 330/604 (54%), Gaps = 40/604 (6%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +++ACA +G+F  GK IHG+VL+   +S+L V N LI MY++  ++  A  +FD M   +
Sbjct: 48   VIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRS 107

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
              SWN+M+S+Y      + A  +F +M S  ++P+++TW  L+S +   G ++  + L  
Sbjct: 108  YISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFG 167

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M+  G   +G +++VV+    +L      +  H Y ++ G +   +V ++L+ +Y K+ 
Sbjct: 168  LMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHG 227

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             +  A  +F  MKN++                                   L SWN+L++
Sbjct: 228  DVNGAWNLFLEMKNKS-----------------------------------LASWNALIT 252

Query: 642  GYSIWGQSKEALVIIHHMKNSG----IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
             ++  G   EAL I   ++ SG    + PNVV+W+++I G       +E+L+ F +MQ  
Sbjct: 253  SHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHA 312

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
             I  N+ T+S++L  C  L  L  G+EIH   ++   + +  V  GL++MY+K G LK  
Sbjct: 313  KILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEG 372

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
              +F K+  K L SWN MI G+ ++G G  A+  F ++++ GF+PD +TF A+L++C +S
Sbjct: 373  HMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHS 432

Query: 818  GLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGA 877
            GLV EG + FD M   Y I P +EHY+CMVDLLG+AG L EA + ++ MP  P+A +WGA
Sbjct: 433  GLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGA 492

Query: 878  LLGSCRIHGHLEYAEIASRRLFKL-EPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            LL SCR+H + E AE  +  LF L     +  Y L+ N+ A S RWED  R+R S    G
Sbjct: 493  LLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKG 552

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            +K     SWI++++ V+ FSA         +I+  L  L  +M++ G V DT    Q + 
Sbjct: 553  LKKNPGQSWIKVEKNVYTFSAGNNMQRGFEQIFEILEELTFQMEREGTVHDTDITPQAVY 612

Query: 997  EEEK 1000
            +E +
Sbjct: 613  QETR 616



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 240/516 (46%), Gaps = 54/516 (10%)

Query: 299 IILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS-- 356
           ++++ C  + +F LG  +H  +++ GF   +H+   L+  Y K   +  A  LF  +S  
Sbjct: 47  LVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVR 106

Query: 357 -------------------------------DLEDDLL-WNEIIMVKLRNEKWENAIKLF 384
                                           +E +L+ W  +I    R+   E A++LF
Sbjct: 107 SYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELF 166

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
             M+    +     +  ++  CA +GAF   K IH Y +K   E    V + LI +Y ++
Sbjct: 167 GLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKH 226

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS----RIQPDIITW 500
             +  A  +F  MK+ +L+SWN++I+S+   G  D A  +F+++  S    R++P++++W
Sbjct: 227 GDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSW 286

Query: 501 NCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR 560
           + ++ G  + G  +  L L R MQ      N  ++S VL    EL  L  GRE HG+++R
Sbjct: 287 SAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVR 346

Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
             +  ++ VG  L++MY K  CL+    +F+  + +++++WNS+I+GY   GL +NA + 
Sbjct: 347 AVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALET 406

Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSL 679
            +QM +   KPD V++ +++S  S  G   E   +   M K   I P +  +  ++    
Sbjct: 407 FDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLG 466

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI------HCLCLKNG 733
           +    RE+ +    M    + PN+    +LL +C     + N  EI      H   L + 
Sbjct: 467 RAGLLREASEIVKNM---PVAPNACVWGALLNSC----RMHNNTEIAEETASHLFNLSHR 519

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
                Y+   L ++Y+ SG  + +  V   +  K L
Sbjct: 520 ETTGTYML--LSNIYAASGRWEDSARVRTSAKTKGL 553



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 156/314 (49%), Gaps = 39/314 (12%)

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
           R M+ +G   +G +  +V++A   +     G+  HG++L  G    L+VG  L+ MY K 
Sbjct: 31  RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90

Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
             +++A+ +FD M  R+ ++WN+++S Y F      A ++  +ME E ++P+LV+W SL+
Sbjct: 91  GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
           S Y+  G                       W            + E+++ F  M+ + ++
Sbjct: 151 SSYARSG-----------------------W------------HEEAMELFGLMRMKGVE 175

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
            +   ++ ++  C  LG     K IH   +K GF + ++V + LI +Y K G++  A  +
Sbjct: 176 VSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNL 235

Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG----FQPDAITFTALLAACKN 816
           F +  NK+LASWN +I   A  G   EA+ +F +L  +G     +P+ ++++A++    +
Sbjct: 236 FLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFAS 295

Query: 817 SGLVEEGWKYFDSM 830
            G  +E  + F  M
Sbjct: 296 KGREKEALELFRRM 309



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 49/324 (15%)

Query: 224 WNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSR----SYADWSSFLEDYESFGGEVQELL 279
           WN+  MV +  F+Y    D   A + F    S     +   W+S +  Y   G   +E +
Sbjct: 111 WNT--MVSAYAFNY----DCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWH-EEAM 163

Query: 280 EVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY 339
           E++G +  KGV      L +++ +C  L AF     +H   +K GF+    +K AL+  Y
Sbjct: 164 ELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVY 223

Query: 340 GKCRDVESANKLFSEVSD-----------------LEDDLL------------------- 363
           GK  DV  A  LF E+ +                 L D+ L                   
Sbjct: 224 GKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNV 283

Query: 364 --WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
             W+ II       + + A++LFR MQ +   A + TI  +L  CA++ A H G++IHG+
Sbjct: 284 VSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGH 343

Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
           V+++ + +N+ V N L++MY++   L+    +F+  +  +L SWNSMI+ Y   G    A
Sbjct: 344 VVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNA 403

Query: 482 WSLFNKMNSSRIQPDIITWNCLLS 505
              F++M     +PD +T+  +LS
Sbjct: 404 LETFDQMIKLGFKPDGVTFVAVLS 427


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 194/565 (34%), Positives = 321/565 (56%), Gaps = 39/565 (6%)

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N + V  +LQ       +   +  HG I+R  L+ D+ +   L++ Y K   ++ A++VF
Sbjct: 52   NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 111

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------- 642
            D M  R++V+WN++I  Y    +   A  +  +M  E  K    + +S++S         
Sbjct: 112  DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 171

Query: 643  ---------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
                                       Y+  G  K+A+ +   M++     + VTW+S++
Sbjct: 172  ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK----SSVTWSSMV 227

Query: 676  SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
            +G +QN+NY E+L  + + Q+  ++ N  T+SS++  C  L  L  GK++H +  K+GF 
Sbjct: 228  AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 287

Query: 736  KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
             + +VA+  +DMY+K G+L+ +  +F +   K L  WN +I GFA +   KE ++LF ++
Sbjct: 288  SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 347

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
             + G  P+ +TF++LL+ C ++GLVEEG ++F  M T Y + P + HYSCMVD+LG+AG 
Sbjct: 348  QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 407

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L EA++ I+++PF P A+IWG+LL SCR++ +LE AE+A+ +LF+LEP N+ N+ L+ N+
Sbjct: 408  LSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNI 467

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A + +WE++ + R  + +  VK V   SWI I   VH FS   + HP   EI   L +L
Sbjct: 468  YAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 527

Query: 976  VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
            V + +K GY P       D++  +K ++L+ H+EKLA+V+GLM     +P+R++KN R+C
Sbjct: 528  VIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRIC 587

Query: 1036 SDCHTAAKYMSLVRGREIFLRDGAR 1060
             DCH   K  S+   R I +RD  R
Sbjct: 588  VDCHEFMKAASMATRRFIIVRDVNR 612



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 198/422 (46%), Gaps = 54/422 (12%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           IL+LC +  A       H  +I+   + DV L   L+N Y KC  VE A ++F  +  LE
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM--LE 116

Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
             L+ WN +I +  RN     A+ +F EM+    K    TI  +L AC       E K++
Sbjct: 117 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 176

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
           H   +K+ ++ NL V   L+ +Y++   ++ A +VF+SM+D +                 
Sbjct: 177 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS----------------- 219

Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                              +TW+ +++G+  + +Y+  L L R  Q +    N  ++S V
Sbjct: 220 ------------------SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 261

Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
           + A + L  L  G++ H  I ++G   +++V +S +DMY K   L+ +  +F  ++ +N+
Sbjct: 262 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 321

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
             WN++ISG+           +  +M+++ + P+ V+++SL+S     G  +E       
Sbjct: 322 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 381

Query: 659 MKNS-GIYPNVVTWTSLIS----GSLQNENYR--ESLKFFIQMQQEDIKPNSTTMSSLLQ 711
           M+ + G+ PNVV ++ ++       L +E Y   +S+ F          P ++   SLL 
Sbjct: 382 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF---------DPTASIWGSLLA 432

Query: 712 TC 713
           +C
Sbjct: 433 SC 434



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 208/446 (46%), Gaps = 79/446 (17%)

Query: 396 SRTIV-KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
           +R +V ++LQ CA+ GA  E K  HG +++  LE ++++ N LI+ YS+   +ELA +VF
Sbjct: 52  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 111

Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
           D M + +L SWN+MI  YT            N+M S                        
Sbjct: 112 DGMLERSLVSWNTMIGLYTR-----------NRMESE----------------------- 137

Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
             L +   M++ GF+ +  ++S VL A          ++ H   ++  +D +LYVGT+L+
Sbjct: 138 -ALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALL 196

Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAKKM---LNQM 624
           D+Y K   +++A +VF++M++++ V W+S+++GY           L+  A++M    NQ 
Sbjct: 197 DLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQF 256

Query: 625 EEEEIKPDLVSWNSLVSG-------------------------YSIWGQSKEALVIIHHM 659
               +     +  +L+ G                         Y+  G  +E+ +I   +
Sbjct: 257 TLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV 316

Query: 660 KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
           +      N+  W ++ISG  ++   +E +  F +MQQ+ + PN  T SSLL  CG  GL+
Sbjct: 317 QEK----NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 372

Query: 720 QNGKEIHCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIM 777
           + G+    L     G   +    + ++D+  ++G L  A E+ +    + T + W  ++ 
Sbjct: 373 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 432

Query: 778 GFAIYGNGKEAILLFHELLETGFQPD 803
              +Y N + A +   +L E   +P+
Sbjct: 433 SCRVYKNLELAEVAAEKLFE--LEPE 456



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 166/358 (46%), Gaps = 9/358 (2%)

Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
            K+ H ++I++  +     ++  LI  Y + G    A + F     RS   W++ +  Y 
Sbjct: 72  AKACHGKIIRI-DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 130

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
               E  E L+++ E+  +G  F    ++ +L  C          ++H   +K   D ++
Sbjct: 131 RNRME-SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNL 189

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           ++  AL++ Y KC  ++ A ++F  + D +  + W+ ++   ++N+ +E A+ L+R  Q 
Sbjct: 190 YVGTALLDLYAKCGMIKDAVQVFESMQD-KSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 248

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
            S +    T+  ++ AC+ + A  EGKQ+H  + KS   SN+ V +  + MY++   L  
Sbjct: 249 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 308

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           +  +F  +++ NL  WN++IS +           LF KM    + P+ +T++ LLS    
Sbjct: 309 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 368

Query: 510 HGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            G  +      + M++  G  PN    S ++  +    LL     S  Y L   + +D
Sbjct: 369 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL-----SEAYELIKSIPFD 421



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 12/211 (5%)

Query: 696 QEDIKP--------NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
           QE++ P        N   +  +LQ C   G +   K  H   ++     D  +   LI+ 
Sbjct: 38  QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 97

Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
           YSK G ++ AR+VF     ++L SWN MI  +       EA+ +F E+   GF+    T 
Sbjct: 98  YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 157

Query: 808 TALLAACK-NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
           +++L+AC  N   +E   K    +S    I   +   + ++DL  K G + +A     +M
Sbjct: 158 SSVLSACGVNCDALE--CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 215

Query: 867 PFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
             K   T W +++     + + E A +  RR
Sbjct: 216 QDKSSVT-WSSMVAGYVQNKNYEEALLLYRR 245


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 203/600 (33%), Positives = 317/600 (52%), Gaps = 33/600 (5%)

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            H   GS  + L + R +     RP+ ++ ++ L A   L  L+ G          G   D
Sbjct: 84   HSRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            ++V +SL+ +Y +   + +A +VFD M  R+ V W+++++G+   G  ++A +M  +M E
Sbjct: 143  VFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT---------------- 670
            + +K D V    ++   +     +    +  H+   G+  +VVT                
Sbjct: 203  DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262

Query: 671  ---------------WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                           W+++ISG  QN    E+L+ F  MQ   I+P+S  + S L  C  
Sbjct: 263  ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            +G L+ G+ +H   ++  F  +  + T  IDMYSK G+L SA+ +F   +++ L  WN M
Sbjct: 323  IGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I     +G G++A+ LF E+ ETG +PD  TF +LL+A  +SGLVEEG  +F  M   + 
Sbjct: 382  IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFK 441

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P  +HY C+VDLL ++G ++EA D + +M  +P   IW ALL  C  +  LE  E  +
Sbjct: 442  ITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIA 501

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
              + +L+P +     L+ NL A + +W+ V ++R  M + G K +   S I+I    H F
Sbjct: 502  DNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAF 561

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
              E   HP   EI  ++  L  EM+K+GY+P T  VY D++EE K + L  H+EKLAI +
Sbjct: 562  LMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAF 621

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ T     + +IKN RVC DCH A KY+S +  REI +RD  RFHHF++G CSC D W
Sbjct: 622  GLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 219/507 (43%), Gaps = 74/507 (14%)

Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
           ++ SL   Y   GD  +A        + S     + +    S  G     L V+  L   
Sbjct: 44  LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALP-P 102

Query: 289 GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
                S   T+ L  C +L     G  V       G+  DV +  +L++ Y +   +  A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162

Query: 349 NKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAK 408
            K+F  +    D + W+ ++   +   +  +AI+++R M+    K     ++ ++QAC  
Sbjct: 163 VKVFDRMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTA 221

Query: 409 VGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
                 G  +HG++L+  +  ++     L+ MY++N  L++A RVF  M   N  SW++M
Sbjct: 222 ARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAM 281

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           IS +   G  D A  LF  M +S IQPD                                
Sbjct: 282 ISGFAQNGQSDEALRLFRNMQASGIQPD-------------------------------- 309

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
             +G+ VS +L A + +  LK GR  HG+I+R   D++  +GT+ +DMY K   L +AQ 
Sbjct: 310 --SGALVSALL-ACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQM 365

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQ 648
           +F+ + +R+++ WN++I+     G   +A  +  +M E  ++PD  ++ SL+S  S  G 
Sbjct: 366 LFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGL 425

Query: 649 SKEALV----IIHHMK----------------NSGIY-------------PNVVTWTSLI 675
            +E  +    +++H K                 SG+              P V  W +L+
Sbjct: 426 VEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALL 485

Query: 676 SGSLQNENYR--ESL-KFFIQMQQEDI 699
           SG L N+     ES+    +++Q +D+
Sbjct: 486 SGCLNNKKLELGESIADNILELQPDDV 512



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 214/482 (44%), Gaps = 90/482 (18%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           R     +A+++FR +   +A+  S T    L ACA++G    G+ +      +  + ++ 
Sbjct: 86  RRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           VC+ L+ +Y+R   +  A +VFD M                                   
Sbjct: 145 VCSSLLHLYARWGAMGDAVKVFDRMP---------------------------------- 170

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + D +TW+ +++G  + G   + + + R M+  G + +   +  V+QA T  R ++ G 
Sbjct: 171 -RRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGA 229

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             HG++LR+G+  D+   TSL+DMY KN  L  A  VF  M +RN V+W+++ISG+   G
Sbjct: 230 SVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNG 289

Query: 613 LFVNAKKMLNQMEEEEIKPD---LVS-------------------------------WNS 638
               A ++   M+   I+PD   LVS                                 +
Sbjct: 290 QSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILGTA 349

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            +  YS  G    A ++ + + +     +++ W ++I+    +   +++L  F +M +  
Sbjct: 350 AIDMYSKCGSLASAQMLFNMISDR----DLILWNAMIACCGAHGRGQDALTLFQEMNETG 405

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF----IKDAYVATGLIDMYSKSGNL 754
           ++P+  T +SLL      GL++ GK +   C+ N F     +  YV   L+D+ ++SG +
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGK-LWFGCMVNHFKITPAEKHYVC--LVDLLARSGLV 462

Query: 755 KSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAIL---LFHELLETGFQPDAITFTAL 810
           + A ++     A  T+A W  ++ G     N K+  L   +   +LE   QPD +   AL
Sbjct: 463 EEASDLLTSMKAEPTVAIWVALLSGCL---NNKKLELGESIADNILE--LQPDDVGVLAL 517

Query: 811 LA 812
           ++
Sbjct: 518 VS 519


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 228/714 (31%), Positives = 360/714 (50%), Gaps = 103/714 (14%)

Query: 360  DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS-RTIVKMLQACAKVGAFHEGKQI 418
            D   WN +I    R       I+ F     SS      RT   +L+AC  V    +G +I
Sbjct: 49   DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKI 105

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            H   LK     ++ V   LI +YSR   +  A  +FD M   ++ S              
Sbjct: 106  HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-------------- 151

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
                                 WN ++SG+   G+ +  LTL  G++++       SV+VV
Sbjct: 152  ---------------------WNAMISGYCQSGNAKEALTLSNGLRAM------DSVTVV 184

Query: 539  --LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
              L A TE      G   H Y +++GL+ +L               L++ Q+VFD M  R
Sbjct: 185  SLLSACTEAGDFNRGVTIHSYSIKHGLESEL---------------LRDCQKVFDRMYVR 229

Query: 597  NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS--------------------- 635
            ++++WNS+I  Y      + A  +  +M    I+PD ++                     
Sbjct: 230  DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 289

Query: 636  -------W--------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
                   W        N++V  Y+  G    A  + + + N+    +V++W ++ISG  Q
Sbjct: 290  GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT----DVISWNTIISGYAQ 345

Query: 681  NENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
            N    E+++ +  M++E +I  N  T  S+L  C   G L+ G ++H   LKNG   D +
Sbjct: 346  NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 405

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            V T L DMY K G L+ A  +F +        WN +I     +G+G++A++LF E+L+ G
Sbjct: 406  VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 465

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             +PD ITF  LL+AC +SGLV+EG   F+ M TDY I P+++HY CMVD+ G+AG L+ A
Sbjct: 466  VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 525

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
              FI++M  +PDA+IWGALL +CR+HG+++  +IAS  LF++EP +   + L+ N+ A +
Sbjct: 526  LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 585

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
             +WE V+ +R      G++    WS +++D  V VF      HP   E+Y EL  L +++
Sbjct: 586  GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 645

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTR 1033
            K +GYVPD R V QD++++EK  +L+SH+E+LAI + L+ T ++  IR+ KN R
Sbjct: 646  KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 699



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 248/556 (44%), Gaps = 101/556 (18%)

Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
           R    +LK C  ++    G ++H   +K GF +DV++  +L++ Y + + V +A  LF E
Sbjct: 87  RTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 143

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKL---FREMQFSSAKAISRTIVKMLQACAKVGA 411
           +  + D   WN +I    ++   + A+ L    R M        S T+V +L AC + G 
Sbjct: 144 MP-VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD-------SVTVVSLLSACTEAGD 195

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
           F+ G  IH Y +K  LES L               L    +VFD M   +L SWNS+I +
Sbjct: 196 FNRGVTIHSYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKA 240

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
           Y        A SLF +M  SRIQPD                    LTL+           
Sbjct: 241 YELNEQPLRAISLFQEMRLSRIQPD-------------------CLTLI----------- 270

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
             S++ +L  + ++R     R   G+ LR G    D+ +G +++ MY K   + +A+ VF
Sbjct: 271 --SLASILSQLGDIRAC---RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 325

Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSGYSIWGQS 649
           + + N ++++WN++ISGY   G    A +M N MEEE EI  +  +W S++   S  G  
Sbjct: 326 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 385

Query: 650 KEALVIIHHMKNSGIYPNV-------------------------------VTWTSLISGS 678
           ++ + +   +  +G+Y +V                               V W +LI+  
Sbjct: 386 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 445

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
             + +  +++  F +M  E +KP+  T  +LL  C   GL+  G+    +   +  I  +
Sbjct: 446 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 505

Query: 739 YVATG-LIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELL 796
               G ++DMY ++G L++A +  +  + +  AS W  ++    ++GN     +    L 
Sbjct: 506 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 565

Query: 797 ETGFQPDAITFTALLA 812
           E   +P+ + +  LL+
Sbjct: 566 EV--EPEHVGYHVLLS 579



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 12/185 (6%)

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK-FFIQMQQED 698
           VS +     +K  +    H++N  +Y     W  +ISG  +  N  E ++ F + M    
Sbjct: 26  VSTHVSLSPNKSKMHTFDHIQNRDVY----AWNLMISGYGRAGNSSEVIRCFSLFMLSSG 81

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           + P+  T  S+L+ C     + +G +IHCL LK GF+ D YVA  LI +YS+   + +AR
Sbjct: 82  LTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNAR 138

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSG 818
            +F +   + + SWN MI G+   GN KEA+ L + L       D++T  +LL+AC  +G
Sbjct: 139 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG 194

Query: 819 LVEEG 823
               G
Sbjct: 195 DFNRG 199



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 4/275 (1%)

Query: 234 IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFR 293
           I H LE        K F   + R    W+S ++ YE    +    + ++ E+    +   
Sbjct: 207 IKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYE-LNEQPLRAISLFQEMRLSRIQPD 265

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRG-FDFDVHLKCALMNFYGKCRDVESANKLF 352
              L  +  + ++L        V    +++G F  D+ +  A++  Y K   V+SA  +F
Sbjct: 266 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 325

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKVGA 411
           + + +  D + WN II    +N     AI+++  M+     A ++ T V +L AC++ GA
Sbjct: 326 NWLPN-TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 384

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
             +G ++HG +LK+ L  ++ V   L  MY +  +LE A  +F  +   N   WN++I+ 
Sbjct: 385 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 444

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           +   G+ + A  LF +M    ++PD IT+  LLS 
Sbjct: 445 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 479


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Vitis vinifera]
          Length = 882

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 243/828 (29%), Positives = 395/828 (47%), Gaps = 107/828 (12%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            VHAS+ K     D+HL  AL+  Y K   V +A K+F  +S   + + +  +I    ++ 
Sbjct: 94   VHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLS-CPNVVSYTAMISGFAKSN 150

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +   A+++F  M+ S  +    + V +L  C ++     G Q+H  V+K    +   V N
Sbjct: 151  RERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSN 210

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             L+ +Y +                                GY+D    LF++M       
Sbjct: 211  ALMGLYGK-------------------------------CGYLDSVLQLFDEMP----HR 235

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRES 554
            DI +WN ++S       Y+    L R M+ + GFR +  ++S +L A   L  +  GRE 
Sbjct: 236  DIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VGREI 294

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQN----------------------------- 585
            H ++++ G + ++ V  +L+  Y K   +++                             
Sbjct: 295  HAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLT 354

Query: 586  --AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
              A EVFD M  RN +++N+++SG+C  G    A     +M EE ++    +   +++  
Sbjct: 355  DLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNAC 414

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNV---------------------------------VT 670
             +  ++K +  I   +   G   N                                  + 
Sbjct: 415  GLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSII 474

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            WTS+I G  +N    E++  F Q Q E  +  +    +++L  CG L   + GK+IHC  
Sbjct: 475  WTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHA 534

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            LK+GF+ D  V   +I MYSK  N+  A +VF       + SWN +I G  ++  G EA+
Sbjct: 535  LKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEAL 594

Query: 790  LLFHELLETGFQPDAITFTALLAACK--NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
             ++ ++ + G +PD +TF  +++A +  NS LV+   + F SM T Y+I PT+EHY+ +V
Sbjct: 595  SVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLV 654

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
             +LG  G L+EA + I  MP +P+A++W ALL +CRIH +    + A++ L  ++P + +
Sbjct: 655  GVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPS 714

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y L+ NL +   RW   + +R  M   G +     SWI  +  VH F A    HP   +
Sbjct: 715  TYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKD 774

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I+  L  L+ E  K GYVPDT  V  +++E +K   L  H+ K+A  YGL+ T+   PIR
Sbjct: 775  IHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIR 834

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++KN  +C DCHT  KY+S+V GREIFLRD +  H F  G+CSC D W
Sbjct: 835  IVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 882



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 163/674 (24%), Positives = 299/674 (44%), Gaps = 68/674 (10%)

Query: 161 SHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKM 220
           SH P  ++N P  L+  P+           ++  +  L+ + ++  +  +K+ HA + K+
Sbjct: 50  SHPP--LSNQPALLSNFPS------VSNDTVNDHYYLLDLSVRYDDVELIKAVHASIFKL 101

Query: 221 GKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLE 280
            +      +  +LI  YL+ G   +A K F      +   +++ +  +     E Q + E
Sbjct: 102 AE---DIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAM-E 157

Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
           ++  +   G+         IL +C +L+   LG ++HA +IK GF     +  ALM  YG
Sbjct: 158 IFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYG 217

Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV 400
           KC  ++S  +LF E+    D   WN +I   ++   +E A +LFR+M+      I    +
Sbjct: 218 KCGYLDSVLQLFDEMPH-RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTL 276

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
             +   A+  A   G++IH +V+K   ESN+SV N LI  Y++   ++    +F+ M+  
Sbjct: 277 STILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVR 336

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           ++ +W  MI++Y   G  D+A  +F+KM +     + I++N +LSG   +G     L   
Sbjct: 337 DVITWTEMITAYMEFGLTDLALEVFDKMPAR----NSISYNAILSGFCQNGEGSKALAFF 392

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M   G      +++ VL A   L   K  ++ HG+IL+ G   +  +  +L+DM  + 
Sbjct: 393 CRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRC 452

Query: 581 DCLQNAQEV--FDNMKNRNIVAWNSLISGYC----------------FKGLFVNAK---- 618
             + +AQ++    +      + W S+I GY                  +G  V  K    
Sbjct: 453 GRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVAST 512

Query: 619 ------------KMLNQMEEEEIK----PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                       +M  Q+    +K     DL   NS+++ YS      +A+ + + M   
Sbjct: 513 AVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAH 572

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC--GGLGLLQ 720
               ++V+W  LI+G L +    E+L  + +M++  IKP++ T   ++         L+ 
Sbjct: 573 ----DIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVD 628

Query: 721 NGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIM 777
           N + +  L +K  +  D  V   T L+ +    G L+ A E+  K   +  AS W  ++ 
Sbjct: 629 NCRRLF-LSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLD 687

Query: 778 GFAIYGN---GKEA 788
              I+ N   GK A
Sbjct: 688 ACRIHSNTTIGKRA 701



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 4/159 (2%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           K +H    K    +D ++A  LI  Y K G + +A +VF   +   + S+  MI GFA  
Sbjct: 92  KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 149

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
              ++A+ +F  +  +G + +  +F A+L  C     +E G +   ++      +     
Sbjct: 150 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQ-LHAIVIKMGFLNYTFV 208

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            + ++ L GK GYLD        MP + D   W  ++ S
Sbjct: 209 SNALMGLYGKCGYLDSVLQLFDEMPHR-DIASWNTVISS 246


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 209/684 (30%), Positives = 351/684 (51%), Gaps = 44/684 (6%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            +  V+++Q+CA++GA  EG++IH  + +  L S++ V N L+ MY +   LE A  VF++
Sbjct: 35   KECVRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEA 94

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
                N+ SW  +I+                                       HG  Q  
Sbjct: 95   TPAKNVFSWTILITVCA-----------------------------------QHGRSQEA 119

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTE-LRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
            L L   M   G +P+  S +  + A +     L  GR  H  + R G    +   TSL+ 
Sbjct: 120  LALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVS 179

Query: 576  MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--DL 633
            MY K   L+ +   F++M   N V+WN++I+ +      + A + L +M  E I+   D+
Sbjct: 180  MYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSDV 239

Query: 634  VSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
            V   +LV+ Y+      +A      ++     PN++TW  LIS  +Q+  ++E+++ F +
Sbjct: 240  VVGTTLVNMYAKCSGLHDANAAFVKLQE----PNIITWNVLISAYVQHCCFKEAMELFRR 295

Query: 694  MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD-AYVATGLIDMYSKSG 752
            M    ++ +  T  ++L  C     L++G+ IH    ++    + A +   +++MY K G
Sbjct: 296  MLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCG 355

Query: 753  NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL- 811
            +L+ A  +F+  +   + +WN MI  +  +G+  EA+  +  + E G  PD  T+ +++ 
Sbjct: 356  SLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVID 415

Query: 812  AACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPD 871
            A+C N+GL EE   YF SM  D+ + P   HY CMV+ LGKAG L +A   I+ MPF+PD
Sbjct: 416  ASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPD 475

Query: 872  ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHS 931
               W + L +CR HG ++  ++A++   +++P  S  Y  +  + A +  +++  R+R  
Sbjct: 476  VLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKL 535

Query: 932  MDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
            M + G++     S I++   V+ F+A    +P + EI+ EL  L  EMK  GY PD   V
Sbjct: 536  MLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHV 595

Query: 992  YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
              D++  +K  +L +H+E+LAI +G++ T    P+R++KN RVC DCHT  K  S +  R
Sbjct: 596  AHDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRR 655

Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
            EI +RD  RFHHF+ G CSC D W
Sbjct: 656  EIIVRDSNRFHHFKNGSCSCKDFW 679



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 129/560 (23%), Positives = 239/560 (42%), Gaps = 64/560 (11%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
           +++ C +L A   G  +H  + + G   DV++   L+  YGKC  +E A  +F E +  +
Sbjct: 40  VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVF-EATPAK 98

Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF-HEGKQI 418
           +   W  +I V  ++ + + A+ LF EM     +  S +    + AC+    F   G+ +
Sbjct: 99  NVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRAL 158

Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT----G 474
           H  + +   +  +     L+SMYS+   LE + R F+SM + N  SWN+MI+++     G
Sbjct: 159 HALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRG 218

Query: 475 LGYVDVAWSLF--------------------------NKMNSSRI---QPDIITWNCLLS 505
           L  +     +F                          +  N++ +   +P+IITWN L+S
Sbjct: 219 LEALRTLQKMFLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLIS 278

Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
            +  H  ++  + L R M  LG   +  +   +L A      L+ GR  H  +  + L  
Sbjct: 279 AYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLAS 338

Query: 566 D-LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
           +   +   +++MY K   LQ+A+ +F +M   +++AWN++I+ Y   G    A +    M
Sbjct: 339 NHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELM 398

Query: 625 EEEEIKPDLVSWNSLVSGYSI-WGQSKEA-LVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
           +EE + PD  ++ S++       G  +EA    +   ++ G+ P    +  ++  SL   
Sbjct: 399 QEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVE-SLGKA 457

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
                 +  IQ      +P+  T +S L  C   G ++ GK    L  K     D   +T
Sbjct: 458 GRLSDAETLIQCM--PFEPDVLTWTSFLANCRSHGDMKRGK----LAAKGAIRIDPEAST 511

Query: 743 G---LIDMYSKSGNLKSAREV--------FRKSANKTLASWNCMIMGFAIYGNGK----- 786
           G   L  +++ +G+ + A  +         RK+A +++      +  F            
Sbjct: 512 GYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKE 571

Query: 787 ---EAILLFHELLETGFQPD 803
              E   L  E+   G+ PD
Sbjct: 572 IFDELKRLDKEMKSAGYDPD 591


>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 206/596 (34%), Positives = 325/596 (54%), Gaps = 51/596 (8%)

Query: 484  LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV- 542
            LF++++S    P+   ++ L+  +  +G + + + L   M       N S VS    A+ 
Sbjct: 68   LFSQVHS----PNPFLYSALIRAYARNGPFHHSIRLYTSM----LNNNVSPVSFTFSALF 119

Query: 543  TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
            + L+    G + H +    G   DLYVG +++ MYVK   L  A++VFD M +R      
Sbjct: 120  SLLKNPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHR------ 173

Query: 603  SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                                         D+V+W  L+  Y+  G    A  +   +   
Sbjct: 174  -----------------------------DVVTWTELIVAYARSGDMDSACELFVGLP-- 202

Query: 663  GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                ++V WTS+++G  QN   +++L+FF +M++  +  +  T+   +  C  LG+    
Sbjct: 203  --VKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYA 260

Query: 723  KEIHCLCLKNGFIK--DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
              I  +   + F    + +V + LIDMYSK GN++ A  VF+      + S++ MI+GFA
Sbjct: 261  DWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFA 320

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
            ++G  + AI LF+E+LE G +P+ +TF  L  AC ++G+VE+G + F +M   Y + PT 
Sbjct: 321  VHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTA 380

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            +HY+CM DLLG+AG+L++A   ++TMP +P+  +WGALLG+  IHG+ + AEIASR LF+
Sbjct: 381  DHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFE 440

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI-DQIVHVFSAEG 959
            LEP N  NY L+    A++ +W+DV R+R  M E  ++     SW++  + I+H F A  
Sbjct: 441  LEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGD 500

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMK 1019
              HP   EI   L  L+  +K  GY P    V  DID+E K  +L+SH+EKLA+ YGL+ 
Sbjct: 501  VKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLS 560

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            T + + I+++KN R+C DCH      S + GR+I +RD  RFHHF  G CSCN+ W
Sbjct: 561  TDAGSTIKIMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 166/364 (45%), Gaps = 16/364 (4%)

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LFS+V    +  L++ +I    RN  + ++I+L+  M  ++   +S T   +        
Sbjct: 68  LFSQVHS-PNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPS 126

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
               G Q+H +       ++L V N +I MY +   L+ A +VFD M   ++ +W  +I 
Sbjct: 127 L---GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIV 183

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
           +Y   G +D A  LF  +       D++ W  +++G+  +   +  L   R M+  G   
Sbjct: 184 AYARSGDMDSACELFVGLPVK----DMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVT 239

Query: 531 NGSSVSVVLQAVTELRLLKYG---RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
           +  ++   + A  +L +  Y    RE      R G   +++VG++L+DMY K   ++ A 
Sbjct: 240 DEITLVGAISACAQLGVSGYADWIREI-AESSRFGSGSNVFVGSALIDMYSKCGNVEEAY 298

Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
            VF  MK  N+ +++S+I G+   G   +A K+  +M E  IKP+ V++  L +  S  G
Sbjct: 299 NVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAG 358

Query: 648 QSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
             ++   +   MK   G+ P    +  +     +  +  ++L+    M  E   PN    
Sbjct: 359 MVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPME---PNGGVW 415

Query: 707 SSLL 710
            +LL
Sbjct: 416 GALL 419



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 34/228 (14%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG ++H      GF  D+++   +++ Y K   ++ A K+F E+    D + W E+I+  
Sbjct: 127 LGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPH-RDVVTWTELIVAY 185

Query: 372 LR-------------------------------NEKWENAIKLFREMQFSSAKAISRTIV 400
            R                               N   + A++ FR+M+ +       T+V
Sbjct: 186 ARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLV 245

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSAL--ESNLSVCNCLISMYSRNNKLELATRVFDSMK 458
             + ACA++G       I      S     SN+ V + LI MYS+   +E A  VF  MK
Sbjct: 246 GAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMK 305

Query: 459 DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
           + N+ S++SMI  +   G    A  LF +M  + I+P+ +T+  L + 
Sbjct: 306 EMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTA 353



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 16/258 (6%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           LI  Y   GD  SA + F     +    W+S +  Y S     ++ L+ + ++   GV+ 
Sbjct: 181 LIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGY-SQNAMPKKALQFFRKMREAGVVT 239

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKR-------GFDFDVHLKCALMNFYGKCRDV 345
               L   +  C +     LGV  +A  I+        G   +V +  AL++ Y KC +V
Sbjct: 240 DEITLVGAISACAQ-----LGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNV 294

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
           E A  +F  + ++ +   ++ +I+    + +  +AIKLF EM  +  K    T V +  A
Sbjct: 295 EEAYNVFKGMKEM-NVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTA 353

Query: 406 CAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLS 463
           C+  G   +G+Q+ G + +   +        C+  +  R   LE A ++  +M  + N  
Sbjct: 354 CSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGG 413

Query: 464 SWNSMISSYTGLGYVDVA 481
            W +++ +    G  DVA
Sbjct: 414 VWGALLGASHIHGNPDVA 431


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 749

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 214/715 (29%), Positives = 369/715 (51%), Gaps = 81/715 (11%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
            +LQ C       E + IHG+++K+    +L V   L+++YS+   +E A +VFD++   N
Sbjct: 64   LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123

Query: 462  LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
            +++W ++++     GYV  +  L                                L L  
Sbjct: 124  VNAWTTLLT-----GYVQNSHPLL------------------------------ALQLFI 148

Query: 522  GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
             M   G  P+  ++ +VL A + L+ +++G++ H Y+++  +D+D  +G SL   Y K  
Sbjct: 149  KMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFR 208

Query: 582  CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
             L+ A + F  +K +++++W S+IS  C  G    +      M  + +KP+  +  S++S
Sbjct: 209  RLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLS 268

Query: 642  GYSIW-----GQSKEALVIIHH------MKNSGIYP--------------------NVVT 670
               +      G    +L I         +KNS +Y                     N+VT
Sbjct: 269  ACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVT 328

Query: 671  WTSLISGSLQNENYRE-----------SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL 719
            W ++I+G  +  +  E           +L  F ++ +  +KP+  T SS+L  C  L  L
Sbjct: 329  WNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVAL 388

Query: 720  QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGF 779
            + G++IH   +K+G + D  V T L+ MY+K G++  A + F +  ++T+ SW  MI GF
Sbjct: 389  EQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGF 448

Query: 780  AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
            A +G  ++A+ LF ++   G +P+ +TF  +L+AC ++GL +E   YF+ M   YNI P 
Sbjct: 449  ARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPV 508

Query: 840  IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLF 899
            ++H++C++D+  + G ++EA+D +  M F+P+ TIW  L+  CR HG  +    A+ +L 
Sbjct: 509  MDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLL 568

Query: 900  KLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
            KL+P +   Y  ++N+   + RW+DV ++R  M E  V  +  WSWI I + V+ F    
Sbjct: 569  KLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPND 628

Query: 960  APHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS---HTEKLAIVYG 1016
              H  + E+Y  L  +++E+K LGY P    V     EE + +VL S   H+EKLAI +G
Sbjct: 629  KSHCQSLEMYKLLETVLNEVKALGYEP-IEDVEVIEKEENEERVLSSTVLHSEKLAIAFG 687

Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSC 1071
            L+   +  PIRV+K+  +C DCH   +++SL++GREI +RD  + H F  G CSC
Sbjct: 688  LLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSC 742



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 159/628 (25%), Positives = 280/628 (44%), Gaps = 54/628 (8%)

Query: 195 FCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLY 253
           F  L E       +  +  H  ++K G  ++ D  V + + + Y + G   SA K F   
Sbjct: 62  FPLLQECIDRNLATEARMIHGHIVKTG--FHEDLFVMTFLVNVYSKCGVMESAHKVFDNL 119

Query: 254 FSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLG 313
             R+   W++ L  Y      +  L +++ ++   G    +  L I+L  C+ L +   G
Sbjct: 120 PRRNVNAWTTLLTGYVQNSHPLLAL-QLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 178

Query: 314 VEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
            +VHA LIK   DFD  +  +L +FY K R +E A K F  + + +D + W  +I     
Sbjct: 179 KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE-KDVISWTSVISSCCD 237

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
           N +   ++  F +M     K    T+  +L AC  +     G QIH   +K    S++ +
Sbjct: 238 NGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILI 297

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N ++ +Y +   L  A ++F+ M+  NL +WN+MI+ +  +  +D+A            
Sbjct: 298 KNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKM--MDLA------------ 343

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
           + D+            H S    L + + +   G +P+  + S VL   + L  L+ G +
Sbjct: 344 EDDVA----------AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQ 393

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            HG I+++G+  D+ VGT+L+ MY K   +  A + F  M +R +++W S+I+G+   GL
Sbjct: 394 IHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGL 453

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWT 672
              A ++   M    IKP+ V++  ++S  S  G + EAL     M K   I P +  + 
Sbjct: 454 SQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFA 513

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG--KEIHCLCL 730
            LI   L+     E+   F  + + + +PN T  S L+  C   G    G       L L
Sbjct: 514 CLIDMYLRLGRVEEA---FDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKL 570

Query: 731 KNGFIKDAYVATGLIDMYSKSG---NLKSAREVFRKSANKTLASWNCMIMGFAIYG---N 784
           K    KD      L++M+  +G   ++   R++ ++     L  W+ + +   +Y    N
Sbjct: 571 KP---KDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPN 627

Query: 785 GKEAI--LLFHELLET--------GFQP 802
            K     L  ++LLET        G++P
Sbjct: 628 DKSHCQSLEMYKLLETVLNEVKALGYEP 655



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 241/545 (44%), Gaps = 91/545 (16%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +H  ++K GF  D+ +   L+N Y KC  +ESA+K+F  +     +  W  ++   ++N 
Sbjct: 80  IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNA-WTTLLTGYVQNS 138

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
               A++LF +M  + A   + T+  +L AC+ + +   GKQ+H Y++K  ++ + S+ N
Sbjct: 139 HPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGN 198

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            L S YS+  +LE A + F  +K+ ++ SW S+ISS    G    + S F  M S     
Sbjct: 199 SLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSD---- 254

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
                                          G +PN  +++ VL A   +  L  G + H
Sbjct: 255 -------------------------------GMKPNEYTLTSVLSACCVMLTLDLGAQIH 283

Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
              ++ G    + +  S+M +Y+K   L  AQ++F+ M+  N+V WN++I+G+       
Sbjct: 284 SLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLA 343

Query: 616 -----------NAKKMLNQMEEEEIKPDLVSWNSLVS----------GYSIWGQSKEALV 654
                       A  M  ++    +KPDL +++S++S          G  I GQ  ++ V
Sbjct: 344 EDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGV 403

Query: 655 IIHHMKNSGIYP---------------------NVVTWTSLISGSLQNENYRESLKFFIQ 693
           +   +  + +                        +++WTS+I+G  ++   +++L+ F  
Sbjct: 404 LADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFED 463

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK---DAYVATGLIDMYSK 750
           M+   IKPN  T   +L  C   GL         L  K   IK   D +    LIDMY +
Sbjct: 464 MRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFAC--LIDMYLR 521

Query: 751 SGNLKSAREVFRK---SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP-DAIT 806
            G ++ A +V  K     N+T+  W+ +I G   +G          +LL+   +P D  T
Sbjct: 522 LGRVEEAFDVVHKMNFEPNETI--WSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVET 577

Query: 807 FTALL 811
           + +LL
Sbjct: 578 YVSLL 582



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 186/407 (45%), Gaps = 52/407 (12%)

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
           LG R   S    +LQ   +  L    R  HG+I++ G   DL+V T L+++Y K   +++
Sbjct: 52  LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 111

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFK-------------------------GLFVNAKKM 620
           A +VFDN+  RN+ AW +L++GY                            G+ +NA   
Sbjct: 112 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 171

Query: 621 LNQME----------EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
           L  +E          +  I  D    NSL S YS + + + A+     +K      +V++
Sbjct: 172 LQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEK----DVIS 227

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
           WTS+IS    N     SL FF+ M  + +KPN  T++S+L  C  +  L  G +IH L +
Sbjct: 228 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSI 287

Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG-----------F 779
           K G+     +   ++ +Y K G L  A+++F       L +WN MI G            
Sbjct: 288 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 347

Query: 780 AIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPT 839
           A + +G  A+ +F +L  +G +PD  TF+++L+ C N   +E+G +    +     ++  
Sbjct: 348 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI-IKSGVLAD 406

Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
           +   + +V +  K G +D+A      MP +   + W +++     HG
Sbjct: 407 VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARHG 452


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Cucumis sativus]
          Length = 908

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 251/845 (29%), Positives = 401/845 (47%), Gaps = 108/845 (12%)

Query: 300  ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
            +L+L T+     L   VHA  +K   + D+ L  AL++ Y K   V  A+K+FS +S   
Sbjct: 103  LLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSC-- 158

Query: 360  DDLLWNEIIMVKLRNEKWEN-AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
             +++    ++       WE+ A++LF  M  S  +    T V +L AC +   +  G Q+
Sbjct: 159  PNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQV 218

Query: 419  HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
            HG V+K  L S + +CN L+ +Y +                                G++
Sbjct: 219  HGIVVKLGLLSCVFICNALMGLYCK-------------------------------CGFL 247

Query: 479  DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSV 537
            D+   LF +M     + DI +WN ++S       Y       RGMQ   G + +  S+S 
Sbjct: 248  DLVLRLFEEMP----ERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLST 303

Query: 538  VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK----NDC----------- 582
            +L A         G++ H   L+ GL+  L V +SL+  Y K    ND            
Sbjct: 304  LLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRD 363

Query: 583  ----------------LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
                            L +A EVF+ M  RN +++N++++G         A ++  +M E
Sbjct: 364  VITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLE 423

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN------------------- 667
            E ++    +  S+++   +    K +  I   +   GI  N                   
Sbjct: 424  EGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMED 483

Query: 668  --------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS-SLLQT 712
                              TS+I G  +N    E++  F   Q E        MS S+L  
Sbjct: 484  AEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSL 543

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
            CG +G  + G ++HC  LK+G I +  V    + MYSK  N+  A  VF     + + SW
Sbjct: 544  CGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSW 603

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS--GLVEEGWKYFDSM 830
            N ++ G  ++  G +A+ ++ ++ + G +PD+ITF  +++A K++   LV+     F SM
Sbjct: 604  NGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSM 663

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
             T++NI PT+EHY+  + +LG+ G L+EA   IR MP +PD  +W ALL SCRI+ +   
Sbjct: 664  ETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERL 723

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             ++A+R +  +EP +  +Y L  NL + S RW   E++R  M E G +     SWI  + 
Sbjct: 724  EKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHEN 783

Query: 951  IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
             +H F A    HP   +IY  L  L+ E  K+GYVPDT  V Q+++E +K + L  H+ K
Sbjct: 784  KIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGK 843

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LA  +G++ TK   PI+++KN R+C DCH   KY+S+V  R+I LRD + FH F +G+CS
Sbjct: 844  LAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCS 903

Query: 1071 CNDCW 1075
            C D W
Sbjct: 904  CTDYW 908



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 270/595 (45%), Gaps = 59/595 (9%)

Query: 160 HSHKPNSITNSP---TSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQ 216
           +S  P     SP    SL+ P   + +    LS I+S F  L  + ++      ++ HAQ
Sbjct: 63  NSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQ 122

Query: 217 MIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
            +K+      +D+    +LI  YL+ G    A K F      +   +++ +  +     E
Sbjct: 123 FLKL-----EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWE 177

Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
             E +E++  +   G+         IL  C + M + LG +VH  ++K G    V +  A
Sbjct: 178 -DEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNA 236

Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
           LM  Y KC  ++   +LF E+ +  D   WN +I   ++  K++ A   FR MQ      
Sbjct: 237 LMGLYCKCGFLDLVLRLFEEMPE-RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLK 295

Query: 395 ISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           +   ++  +L ACA      +G+Q+H   LK  LES+LSV + LI  Y++       T +
Sbjct: 296 VDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDL 355

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F++M   ++ +W  MI+SY   G +D A  +FNKM     + + I++N +L+G   +   
Sbjct: 356 FETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMP----KRNCISYNAVLAGLSRNDDG 411

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
              L L   M   G   +  +++ ++ A   L+  K  ++  G++++ G+  +  + T+L
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETAL 471

Query: 574 MDMYVKNDCLQNAQEVF--DNMKNRNIVAWNSLISGYCFKG-------LF---------- 614
           +DMY +   +++A+++F   +++N       S+I GY   G       LF          
Sbjct: 472 VDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIV 531

Query: 615 ---------------VNAKKMLNQMEEEEIKPDLVS----WNSLVSGYSIWGQSKEALVI 655
                          +   +M  QM    +K  L++     N+ VS YS      +A+ +
Sbjct: 532 MDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRV 591

Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            + M       ++V+W  L++G + +    ++L  + +M++  IKP+S T + ++
Sbjct: 592 FNTMN----MQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALII 642



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 178/375 (47%), Gaps = 18/375 (4%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y+EFG   SA + F     R+   +++ L    S   +    LE++ E+  +GV  
Sbjct: 370 MITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGL-SRNDDGSRALELFIEMLEEGVEI 428

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               LT I+  C  L +F +  ++   ++K G   +  ++ AL++ Y +C  +E A K+F
Sbjct: 429 SDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIF 488

Query: 353 SEVSDLEDDL--LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTI-VKMLQACAKV 409
            + S LE+D   +   +I    RN K   AI LF   Q   A  +   +   +L  C  +
Sbjct: 489 YQRS-LENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSI 547

Query: 410 GAFHE-GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSM 468
           G FHE G Q+H + LKS L +   V N  +SMYS+   ++ A RVF++M   ++ SWN +
Sbjct: 548 G-FHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGL 606

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG--HFTHGSYQNVLTLLRGMQSL 526
           ++ +      D A  ++ KM  + I+PD IT+  ++S   H       +  +L   M++ 
Sbjct: 607 VAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETE 666

Query: 527 -GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
              +P     +  +  +    LL+   E+   I    L+ D+YV  +L+     N C  N
Sbjct: 667 HNIKPTLEHYASFISVLGRWGLLE---EAEQTIRNMPLEPDVYVWRALL-----NSCRIN 718

Query: 586 AQEVFDNMKNRNIVA 600
             E  + +  RNI+A
Sbjct: 719 KNERLEKLAARNILA 733



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 168/389 (43%), Gaps = 68/389 (17%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVES 347
           KG+      L+ +L  C   +    G ++HA  +K G +  + +  +L+ FY KC     
Sbjct: 292 KGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAND 351

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKL-------------------------------RNEK 376
              LF E   + D + W  +I   +                               RN+ 
Sbjct: 352 VTDLF-ETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDD 410

Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
              A++LF EM     +    T+  ++ AC  + +F   +QI G+V+K  + SN  +   
Sbjct: 411 GSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETA 470

Query: 437 LISMYSRNNKLELATRVF--DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           L+ MY+R  ++E A ++F   S+++   +   SMI  Y   G ++ A SLF+   S    
Sbjct: 471 LVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSE--- 527

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
              I  + ++S         ++L+L     S+GF                    + G + 
Sbjct: 528 -GAIVMDEVMS--------TSILSLC---GSIGFH-------------------EMGMQM 556

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H + L++GL  +  VG + + MY K   + +A  VF+ M  ++IV+WN L++G+      
Sbjct: 557 HCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQG 616

Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
             A  +  +ME+  IKPD +++  ++S Y
Sbjct: 617 DKALGIWKKMEKAGIKPDSITFALIISAY 645


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like
            [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like
            [Cucumis sativus]
          Length = 724

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 209/614 (34%), Positives = 313/614 (50%), Gaps = 72/614 (11%)

Query: 529  RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
            +P  S    +L+   + R LK G++ H +I  +G    LY+   L+DMY K   L +A++
Sbjct: 116  KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEK 174

Query: 589  VFD-------------------------------NMKNRNIVAWNSLISGYCFKGLFVNA 617
            VFD                                M NR+  +W ++ISG         A
Sbjct: 175  VFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEA 234

Query: 618  KKMLNQMEEEE------------------------------------IKPDLVSWNSLVS 641
             ++   M++ +                                    +  D V W SL+ 
Sbjct: 235  LELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLD 294

Query: 642  GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
             Y   G  +EA  I   M+      +VV+WT++I   L+N    E    F  +   +I P
Sbjct: 295  MYGKCGSIEEARYIFDKMEER----DVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMP 350

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            N  T + +L  C  L     GK+IH   ++ GF   +  A+ L+ MYSK G++++A+ VF
Sbjct: 351  NDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVF 410

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
                   L SW  +++G+A +G   +A+  F  LL++G +PD I F  +L+AC ++GLV+
Sbjct: 411  EILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVD 470

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G +YF S+   + +  TI+HY+C++DLL +AG   EA   I  MP KPD  IW ALLG 
Sbjct: 471  KGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGG 530

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
            CRIHG+LE A+ A++ LF++EP N A Y  + N+ A +    +   +R +MD  G+    
Sbjct: 531  CRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKP 590

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SWI+I + VHVFS     HP + EI   L  L   MK++GYVPDT  V  D++ E+K 
Sbjct: 591  GMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKE 650

Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
            + L  H+EKLA+ +G++ T S  PI+V KN R C DCH A K++S + GR+I +RD  RF
Sbjct: 651  ENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRF 710

Query: 1062 HHFREGECSCNDCW 1075
            H F  G CSC D W
Sbjct: 711  HCFEGGSCSCKDYW 724



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 235/513 (45%), Gaps = 46/513 (8%)

Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
           ++ L D  L+ E I +     +   A++L   ++    K  +   + +L+ C K  A  E
Sbjct: 82  INRLCDSKLFKEAIDILCGQSRLREAVQLLYRIE----KPYASIYLTLLKFCLKQRALKE 137

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           GKQ+H ++ K++    L + N L+ MY++   L  A +VFD M   +L SWN MIS Y  
Sbjct: 138 GKQVHAHI-KTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVK 196

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF-RPNGS 533
            G  + A +LF+KM +     D  +W  ++SG   H   +  L L R MQ   + + N  
Sbjct: 197 GGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKC 252

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           ++S  L A   +  L  G++ HG+I+R GLD D  V  SL+DMY K   ++ A+ +FD M
Sbjct: 253 TISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKM 312

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS------------ 641
           + R++V+W ++I  Y   G       +   +    I P+  ++  +++            
Sbjct: 313 EERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGK 372

Query: 642 ---------GYSIWGQSKEALVIIH----HMKNSGIY------PNVVTWTSLISGSLQNE 682
                    G+  +  +  ALV ++     ++N+         P++ +WTSL+ G  Q+ 
Sbjct: 373 QIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHG 432

Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVA 741
            + ++L FF  + +   KP+      +L  C   GL+  G E  H +  K+G  +     
Sbjct: 433 QHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHY 492

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIMGFAIYGNGKEAILLFHELLETGF 800
             +ID+ +++G    A  +  +   K     W  ++ G  I+GN + A      L E   
Sbjct: 493 ACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFE--I 550

Query: 801 QPD-AITFTALLAACKNSGLVEEGWKYFDSMST 832
           +P+   T+  L     ++G+  E     ++M +
Sbjct: 551 EPENPATYVTLANIYASAGMRAEEANIRETMDS 583



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 196/462 (42%), Gaps = 71/462 (15%)

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           + I   +LK C K  A   G +VHA  IK      +++   L++ Y KC  +  A K+F 
Sbjct: 119 ASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFD 177

Query: 354 EV--SDL----------------------------EDDLLWNEIIMVKLRNEKWENAIKL 383
           E+   DL                             D+  W  II   +++ + E A++L
Sbjct: 178 EMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALEL 237

Query: 384 FREMQ-FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           +R MQ    +K+   TI   L A A + + H GK+IHG++++  L+S+  V         
Sbjct: 238 YRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVV--------- 288

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
                                 W S++  Y   G ++ A  +F+KM     + D+++W  
Sbjct: 289 ----------------------WCSLLDMYGKCGSIEEARYIFDKME----ERDVVSWTT 322

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           ++  +  +G  +    L R + +    PN  + + VL A  +L     G++ H Y++R G
Sbjct: 323 MIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVG 382

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            D      ++L+ MY K   ++NA+ VF+ +   ++ +W SL+ GY   G    A     
Sbjct: 383 FDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFE 442

Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQN 681
            + +   KPD +++  ++S  +  G   + L   H +K   G+   +  +  +I    + 
Sbjct: 443 LLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARA 502

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
             + E+     +M    IKP+    ++LL  C   G L+  K
Sbjct: 503 GQFTEAESIINEMP---IKPDKYIWAALLGGCRIHGNLELAK 541



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 17/333 (5%)

Query: 183 AKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-------LIF 235
            KQ      +SG   L  +N+   L  + +K   ++   K++  D+MV         +I 
Sbjct: 138 GKQVHAHIKTSGSIGLYISNR---LLDMYAKCGSLVDAEKVF--DEMVHRDLCSWNIMIS 192

Query: 236 HYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSR 295
            Y++ G+F  A   F    +R    W++ +          +E LE++  L  K    +S 
Sbjct: 193 GYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHN-RPEEALELY-RLMQKHDYSKSN 250

Query: 296 ILTIILKLCTK--LMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
             TI   L     + +  +G ++H  +++ G D D  + C+L++ YGKC  +E A  +F 
Sbjct: 251 KCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFD 310

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           ++ +  D + W  +I   L+N + E    LFR +  S+      T   +L ACA + A  
Sbjct: 311 KMEE-RDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAED 369

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            GKQIH Y+++   +S  S  + L+ MYS+   +E A  VF+ +   +L SW S++  Y 
Sbjct: 370 LGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYA 429

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
             G  D A   F  +  S  +PD I +  +LS 
Sbjct: 430 QHGQHDKALHFFELLLKSGTKPDGIAFIGVLSA 462



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 24/257 (9%)

Query: 685 RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
           RE+++   +++    KP ++   +LL+ C     L+ GK++H     +G I   Y++  L
Sbjct: 105 REAVQLLYRIE----KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSI-GLYISNRL 159

Query: 745 IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDA 804
           +DMY+K G+L  A +VF +  ++ L SWN MI G+   GN ++A  LF ++       D 
Sbjct: 160 LDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DN 215

Query: 805 ITFTALLAACKNSGLVEEGWKYFDSMST-DYNIIP--TIEHYSCMVDLLGKAGYLDEAWD 861
            ++TA+++ C      EE  + +  M   DY+     TI         +       +   
Sbjct: 216 FSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHG 275

Query: 862 FIRTMPFKPDATIWGALL---GSCRIHGHLEYAEIASRRLF-KLEPCNSANYNLMMNL-L 916
            I  M    D  +W +LL   G C   G +E A    R +F K+E  +  ++  M++  L
Sbjct: 276 HIMRMGLDSDEVVWCSLLDMYGKC---GSIEEA----RYIFDKMEERDVVSWTTMIHTYL 328

Query: 917 AMSNRWEDVERLRHSMD 933
               R E     RH M+
Sbjct: 329 KNGRREEGFALFRHLMN 345


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 243/828 (29%), Positives = 395/828 (47%), Gaps = 107/828 (12%)

Query: 316  VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
            VHAS+ K     D+HL  AL+  Y K   V +A K+F  +S   + + +  +I    ++ 
Sbjct: 112  VHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLS-CPNVVSYTAMISGFAKSN 168

Query: 376  KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            +   A+++F  M+ S  +    + V +L  C ++     G Q+H  V+K    +   V N
Sbjct: 169  RERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSN 228

Query: 436  CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
             L+ +Y +                                GY+D    LF++M       
Sbjct: 229  ALMGLYGK-------------------------------CGYLDSVLQLFDEMP----HR 253

Query: 496  DIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRES 554
            DI +WN ++S       Y+    L R M+ + GFR +  ++S +L A   L  +  GRE 
Sbjct: 254  DIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VGREI 312

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQN----------------------------- 585
            H ++++ G + ++ V  +L+  Y K   +++                             
Sbjct: 313  HAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLT 372

Query: 586  --AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
              A EVFD M  RN +++N+++SG+C  G    A     +M EE ++    +   +++  
Sbjct: 373  DLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNAC 432

Query: 644  SIWGQSKEALVIIHHMKNSGIYPNV---------------------------------VT 670
             +  ++K +  I   +   G   N                                  + 
Sbjct: 433  GLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSII 492

Query: 671  WTSLISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLC 729
            WTS+I G  +N    E++  F Q Q E  +  +    +++L  CG L   + GK+IHC  
Sbjct: 493  WTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHA 552

Query: 730  LKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            LK+GF+ D  V   +I MYSK  N+  A +VF       + SWN +I G  ++  G EA+
Sbjct: 553  LKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEAL 612

Query: 790  LLFHELLETGFQPDAITFTALLAACK--NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
             ++ ++ + G +PD +TF  +++A +  NS LV+   + F SM T Y+I PT+EHY+ +V
Sbjct: 613  SVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLV 672

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
             +LG  G L+EA + I  MP +P+A++W ALL +CRIH +    + A++ L  ++P + +
Sbjct: 673  GVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPS 732

Query: 908  NYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGE 967
             Y L+ NL +   RW   + +R  M   G +     SWI  +  VH F A    HP   +
Sbjct: 733  TYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKD 792

Query: 968  IYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIR 1027
            I+  L  L+ E  K GYVPDT  V  +++E +K   L  H+ K+A  YGL+ T+   PIR
Sbjct: 793  IHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIR 852

Query: 1028 VIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            ++KN  +C DCHT  KY+S+V GREIFLRD +  H F  G+CSC D W
Sbjct: 853  IVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 900



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 163/674 (24%), Positives = 299/674 (44%), Gaps = 68/674 (10%)

Query: 161 SHKPNSITNSPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKM 220
           SH P  ++N P  L+  P+           ++  +  L+ + ++  +  +K+ HA + K+
Sbjct: 68  SHPP--LSNQPALLSNFPS------VSNDTVNDHYYLLDLSVRYDDVELIKAVHASIFKL 119

Query: 221 GKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLE 280
            +      +  +LI  YL+ G   +A K F      +   +++ +  +     E Q + E
Sbjct: 120 AE---DIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAM-E 175

Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
           ++  +   G+         IL +C +L+   LG ++HA +IK GF     +  ALM  YG
Sbjct: 176 IFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYG 235

Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIV 400
           KC  ++S  +LF E+    D   WN +I   ++   +E A +LFR+M+      I    +
Sbjct: 236 KCGYLDSVLQLFDEMPH-RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTL 294

Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
             +   A+  A   G++IH +V+K   ESN+SV N LI  Y++   ++    +F+ M+  
Sbjct: 295 STILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVR 354

Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
           ++ +W  MI++Y   G  D+A  +F+KM +     + I++N +LSG   +G     L   
Sbjct: 355 DVITWTEMITAYMEFGLTDLALEVFDKMPAR----NSISYNAILSGFCQNGEGSKALAFF 410

Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
             M   G      +++ VL A   L   K  ++ HG+IL+ G   +  +  +L+DM  + 
Sbjct: 411 CRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRC 470

Query: 581 DCLQNAQEV--FDNMKNRNIVAWNSLISGYC----------------FKGLFVNAK---- 618
             + +AQ++    +      + W S+I GY                  +G  V  K    
Sbjct: 471 GRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVAST 530

Query: 619 ------------KMLNQMEEEEIK----PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
                       +M  Q+    +K     DL   NS+++ YS      +A+ + + M   
Sbjct: 531 AVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAH 590

Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC--GGLGLLQ 720
               ++V+W  LI+G L +    E+L  + +M++  IKP++ T   ++         L+ 
Sbjct: 591 ----DIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVD 646

Query: 721 NGKEIHCLCLKNGFIKDAYVA--TGLIDMYSKSGNLKSAREVFRKSANKTLAS-WNCMIM 777
           N + +  L +K  +  D  V   T L+ +    G L+ A E+  K   +  AS W  ++ 
Sbjct: 647 NCRRLF-LSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLD 705

Query: 778 GFAIYGN---GKEA 788
              I+ N   GK A
Sbjct: 706 ACRIHSNTTIGKRA 719



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 4/159 (2%)

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           K +H    K    +D ++A  LI  Y K G + +A +VF   +   + S+  MI GFA  
Sbjct: 110 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
              ++A+ +F  +  +G + +  +F A+L  C     +E G +   ++      +     
Sbjct: 168 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQ-LHAIVIKMGFLNYTFV 226

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            + ++ L GK GYLD        MP + D   W  ++ S
Sbjct: 227 SNALMGLYGKCGYLDSVLQLFDEMPHR-DIASWNTVISS 264


>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
 gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
          Length = 723

 Score =  370 bits (950), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 209/658 (31%), Positives = 343/658 (52%), Gaps = 45/658 (6%)

Query: 402  MLQACAKVGAFHEGKQIHGYVLKSALESNLS-VCNCLISMYSRNNKLELATRVFDSMKDH 460
            + + CA        + +H   L++ L S    V N LI MY+     + A R FD +   
Sbjct: 108  VFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVK 167

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            +   W ++I      G +D A  L  +      + ++++W  L++G+   G   + +   
Sbjct: 168  DAVVWATVIGGLVRWGLLDEARRLLVQAP----ERNVVSWTSLIAGYSRAGRPADAVYCF 223

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
              M S G  P+  +V   L A ++L+ L++GR  H  + +  +     +  +L+DMY K 
Sbjct: 224  NCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKC 283

Query: 581  DCLQNAQEVFDNM-KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSL 639
              +  AQ VFD + + +    WN +I GYC  G    A+ + +QM       D++++NS+
Sbjct: 284  GDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGAR----DVITFNSM 339

Query: 640  VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
            ++GY            IH                  SG L++     +L+ F+Q+++  +
Sbjct: 340  ITGY------------IH------------------SGRLRD-----ALQLFMQLRRHGM 364

Query: 700  KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
            + ++ T+ SLL  C  LG L  G+ +H    +    +D Y+ T L+DMY K G +  A  
Sbjct: 365  RADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATA 424

Query: 760  VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
            VF +   + + +W+ MI G A  G G +A+  F ++   GFQP ++T+ A+L AC +S L
Sbjct: 425  VFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSL 484

Query: 820  VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
            + EG ++F+ M + + + P IEHY CM+DLL ++G LDEA   ++TMP +P+A IW ++L
Sbjct: 485  LNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASIL 544

Query: 880  GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
             +CR+H +++ A  A+  L KL P   A Y  + N+   S +W + +R+R  M+E GVK 
Sbjct: 545  SACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKK 604

Query: 940  VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
               +S I +   VH F      HP T EI   +  +   +K  GY P T  +  D+DEEE
Sbjct: 605  TAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIARRLKSAGYSPATSRIAVDVDEEE 664

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRD 1057
            K + LL+H+EK+AI +GL+      PI ++KN RVC DCH+A K +S +  REI +RD
Sbjct: 665  KEQALLAHSEKIAIAFGLISLPPNLPIHIMKNLRVCEDCHSAIKLISQLWNREIIVRD 722



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 174/352 (49%), Gaps = 9/352 (2%)

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  +I    R  +  +A+  F  M     +     ++  L AC+K+     G+ +H  V 
Sbjct: 203 WTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVG 262

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSM-KDHNLSSWNSMISSYTGLGYVDVAW 482
           K  ++    +   LI MY++   +  A  VFD++ +      WN +I  Y  LG+VD+A 
Sbjct: 263 KKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIAR 322

Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
           SLF++M +     D+IT+N +++G+   G  ++ L L   ++  G R +  +V  +L A 
Sbjct: 323 SLFDQMGAR----DVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTAC 378

Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
             L  L  GR  H  I +  ++ D+Y+ T+L+DMY+K   +  A  VF  M  R++  W+
Sbjct: 379 ASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWS 438

Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN- 661
           ++I+G  F G+ ++A +   QM+ +  +P  V++ ++++  S      E     + M++ 
Sbjct: 439 AMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSL 498

Query: 662 SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++P +  +  +I    ++    E++     +Q   ++PN+   +S+L  C
Sbjct: 499 HKLHPQIEHYGCMIDLLARSGLLDEAMHL---VQTMPMQPNAVIWASILSAC 547



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 137/317 (43%), Gaps = 37/317 (11%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I   + +G    A +       R+   W+S +  Y S  G   + +  +  +   GV 
Sbjct: 174 TVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGY-SRAGRPADAVYCFNCMLSDGVE 232

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                +   L  C+KL     G  +H  + K+       L   L++ Y KC D+  A  +
Sbjct: 233 PDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAV 292

Query: 352 FSEVSDLEDDLLWNEII-----------------------------MVK--LRNEKWENA 380
           F  V   +    WN II                             M+   + + +  +A
Sbjct: 293 FDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDA 352

Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISM 440
           ++LF +++    +A + T+V +L ACA +GA  +G+ +H  + +  +E ++ +   L+ M
Sbjct: 353 LQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDM 412

Query: 441 YSRNNKLELATRVFDSMKDHNLSSWNSMIS--SYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           Y +  +++ AT VF  M + ++ +W++MI+  ++ G+G    A   F +M     QP  +
Sbjct: 413 YMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGM--DALESFCQMKRDGFQPTSV 470

Query: 499 TWNCLLSGHFTHGSYQN 515
           T+  +L+   +H S  N
Sbjct: 471 TYIAVLTA-CSHSSLLN 486



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 6/252 (2%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y + G    A   F    +R    ++S +  Y    G +++ L+++ +L   G+  
Sbjct: 308 IIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGY-IHSGRLRDALQLFMQLRRHGMRA 366

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
            +  +  +L  C  L A   G  +HAS+ +R  + DV+L  AL++ Y KC  V+ A  +F
Sbjct: 367 DNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVF 426

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             + +  D   W+ +I     N    +A++ F +M+    +  S T + +L AC+     
Sbjct: 427 HRMGE-RDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLL 485

Query: 413 HEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
           +EG+Q H   ++S   L   +    C+I + +R+  L+ A  +  +M    N   W S++
Sbjct: 486 NEGRQ-HFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASIL 544

Query: 470 SSYTGLGYVDVA 481
           S+      +D+A
Sbjct: 545 SACRVHKNIDLA 556


>gi|413941674|gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
          Length = 876

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 232/778 (29%), Positives = 384/778 (49%), Gaps = 69/778 (8%)

Query: 348  ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
            A K+F  ++   D L W+ +I        +E  + L   M           I ++LQACA
Sbjct: 118  ARKVFEGMA-CRDLLAWSAMIGAYAIRGLYEEVVALAVAMVREGVIPDRFLITRILQACA 176

Query: 408  KVGAFHEGKQIHGYVLKSALES----NLSVCNCLISMY---------------------- 441
                   G  +H   ++    +    ++ V N +++MY                      
Sbjct: 177  YTEDLELGTAMHSLAIRRGFMAEGARDVPVGNSVLAMYVKCGELGRARAAFDMMGQRDLC 236

Query: 442  ---------SRNNKLELATRVFDSMK----DHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
                      R+N+ E A R+ D M+    +  L +WN+++SSY   G +DVA  +  +M
Sbjct: 237  TWNSMIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQM 296

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQN-VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
              S + PD++TW  L+SG F HG      L     M+  G  PNG +++  + A   LRL
Sbjct: 297  EESGVAPDVVTWTSLVSG-FVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRL 355

Query: 548  LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
            L  G E H + ++ G   ++  G SL+DMY K   +  A+ VFD +  ++I +WNS+++G
Sbjct: 356  LSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIPEKDIFSWNSMVAG 415

Query: 608  YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
            Y   G    A ++  +ME   ++ ++++WN ++SGY   G  + A  +   M++ G+  +
Sbjct: 416  YAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGYIRNGDDERAFELFQMMESCGVKRD 475

Query: 668  VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
              +W +LI+GS+ N +   +L+ F QMQ   ++P+  T+ S++     L      +EIH 
Sbjct: 476  TASWNALIAGSVHNGHSDRALRIFWQMQSLLVRPDFITILSIIPAFANLAGFWKVREIHA 535

Query: 728  LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
                N    D  +A  LI+ YSKSG+L  A  VF + +++ + SWNC+I+   ++G+  E
Sbjct: 536  CIYHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSRNIISWNCIILAHLLHGSPSE 595

Query: 788  AILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMV 847
            A+  F E+ + G +PD  T TA++ A    G V E  + F +M+ DYNIIP ++HY+ +V
Sbjct: 596  ALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKRIFHNMTHDYNIIPDLDHYTAIV 655

Query: 848  DLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSA 907
            DLLG++G L EA++FI  MP  P+  +W ALL +  IHG+   A + +R L  L+P +  
Sbjct: 656  DLLGRSGSLQEAYEFIGNMPLIPNLAVWEALLTAATIHGNARLANLTARELSSLDPSDPR 715

Query: 908  NYNLMMNLLAMSNRWEDVERLR-----HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPH 962
               L+ N   ++ +  DV  +        +++V   SV      +I   V++FS      
Sbjct: 716  IQRLVFNYWGLTGKSVDVPLMTVYNGGRELEDVDSCSV------EIKNNVYLFS------ 763

Query: 963  PATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS-----HTEKLAIVYGL 1017
              TG+    L   V+E+K +  +   R    +I  E   +         H EKLAI + +
Sbjct: 764  --TGD-NLALESTVAELKLI--MIQIRMSLLNISNETNAEEEKEELSGIHCEKLAIAFAI 818

Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
              +     IR+IK  R+CS CH  AK +S    R+I ++D    H F +G+CSC   W
Sbjct: 819  SNSPPFRSIRIIKTLRMCSHCHIFAKLVSEKYERQILIKDSNCLHKFEDGKCSCEGYW 876



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 200/400 (50%), Gaps = 39/400 (9%)

Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           LI+++S   +L  A +VF+ M   +L +W++MI +Y                        
Sbjct: 105 LITVHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYA----------------------- 141

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
                         G Y+ V+ L   M   G  P+   ++ +LQA      L+ G   H 
Sbjct: 142 ------------IRGLYEEVVALAVAMVREGVIPDRFLITRILQACAYTEDLELGTAMHS 189

Query: 557 YILRNGL----DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             +R G       D+ VG S++ MYVK   L  A+  FD M  R++  WNS+I G C   
Sbjct: 190 LAIRRGFMAEGARDVPVGNSVLAMYVKCGELGRARAAFDMMGQRDLCTWNSMIFGCCRSN 249

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
            +  A+++L+ M  +  +P LV+WN+LVS Y+  G+   A+ ++  M+ SG+ P+VVTWT
Sbjct: 250 EWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQMEESGVAPDVVTWT 309

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
           SL+SG +  +   E+L  F +M+   ++PN  T++S +  C  L LL  G E+HC  +K 
Sbjct: 310 SLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHAIKV 369

Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
           G + +      L+DMY+K G + +A+ VF +   K + SWN M+ G+A  G   +A  LF
Sbjct: 370 GSVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIPEKDIFSWNSMVAGYAQAGYCGKAYELF 429

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            E+   G + + IT+  +++    +G  E  ++ F  M +
Sbjct: 430 CEMESLGVRRNVITWNIMISGYIRNGDDERAFELFQMMES 469



 Score =  156 bits (394), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 196/420 (46%), Gaps = 52/420 (12%)

Query: 335 LMNFYGKCRDVESANKLFSEVSD---LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
           L++ Y +  +++ A ++  ++ +     D + W  ++   +  ++   A+  F  M+ + 
Sbjct: 276 LVSSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAG 335

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +    TI   + ACA +    +G ++H + +K    +N+   N L+ MY++  ++  A 
Sbjct: 336 VEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIIAAK 395

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           RVFD + + ++ SWNSM++ Y   GY   A+ LF +M S  ++ ++ITWN ++SG+  +G
Sbjct: 396 RVFDEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGYIRNG 455

Query: 512 SYQNVLTLLRGMQSLG-----------------------------------FRPNGSSVS 536
             +    L + M+S G                                    RP+  ++ 
Sbjct: 456 DDERAFELFQMMESCGVKRDTASWNALIAGSVHNGHSDRALRIFWQMQSLLVRPDFITIL 515

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            ++ A   L      RE H  I  N L+ D  +  +L++ Y K+  L  A  VFD   +R
Sbjct: 516 SIIPAFANLAGFWKVREIHACIYHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSR 575

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           NI++WN +I  +   G    A     +M++E ++PD  +  +++  Y + G+  EA  I 
Sbjct: 576 NIISWNCIILAHLLHGSPSEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKRIF 635

Query: 657 HHMKNS-GIYPNVVTWTSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           H+M +   I P++  +T+++     SGSLQ     E+ +F   M    + PN     +LL
Sbjct: 636 HNMTHDYNIIPDLDHYTAIVDLLGRSGSLQ-----EAYEFIGNMP---LIPNLAVWEALL 687



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 188/443 (42%), Gaps = 69/443 (15%)

Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
           W+S +  +   G    E L  +  +   GV      +   +  C  L     G+E+H   
Sbjct: 308 WTSLVSGF-VHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHA 366

Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
           IK G   +V    +L++ Y KC ++ +A ++F E+ + +D   WN ++    +      A
Sbjct: 367 IKVGSVNNVLSGNSLVDMYAKCGEIIAAKRVFDEIPE-KDIFSWNSMVAGYAQAGYCGKA 425

Query: 381 IKLFREMQFSSAKAISRTIVK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
            +LF EM+   +  + R ++    M+    + G      ++   +    ++ + +  N L
Sbjct: 426 YELFCEME---SLGVRRNVITWNIMISGYIRNGDDERAFELFQMMESCGVKRDTASWNAL 482

Query: 438 ISMYSRNNKLELATRVFDSMKD-----------------HNLSSW--------------- 465
           I+    N   + A R+F  M+                   NL+ +               
Sbjct: 483 IAGSVHNGHSDRALRIFWQMQSLLVRPDFITILSIIPAFANLAGFWKVREIHACIYHNNL 542

Query: 466 -------NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
                  N++I++Y+  G +  A ++F++ +SSR   +II+WNC++  H  HGS    L 
Sbjct: 543 EMDGKIANALINAYSKSGDLAGACAVFDR-HSSR---NIISWNCIILAHLLHGSPSEALD 598

Query: 519 LLRGMQSLGFRPNGSSVSVVLQA------VTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
               M+  G RP+ ++++ V++A      V+E + + +   +H Y +   LD+     T+
Sbjct: 599 RFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKRI-FHNMTHDYNIIPDLDHY----TA 653

Query: 573 LMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAK-KMLNQMEEEEIK 630
           ++D+  ++  LQ A E   NM    N+  W +L++     G   NA+   L   E   + 
Sbjct: 654 IVDLLGRSGSLQEAYEFIGNMPLIPNLAVWEALLTAATIHG---NARLANLTARELSSLD 710

Query: 631 PDLVSWNSLVSGYSIWGQSKEAL 653
           P       LV  Y  WG + +++
Sbjct: 711 PSDPRIQRLVFNY--WGLTGKSV 731



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 44/247 (17%)

Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
           T LI ++S +G L  AR+VF   A + L +W+ MI  +AI G  +E + L   ++  G  
Sbjct: 103 TKLITVHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYEEVVALAVAMVREGVI 162

Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
           PD    T +L AC  +  +E G                    + M  L  + G++ E   
Sbjct: 163 PDRFLITRILQACAYTEDLELG--------------------TAMHSLAIRRGFMAEG-- 200

Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
                    D  +  ++L      G L  A  A   + + + C    +N M+     SN 
Sbjct: 201 -------ARDVPVGNSVLAMYVKCGELGRARAAFDMMGQRDLC---TWNSMIFGCCRSNE 250

Query: 922 WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
           WE+  RL   M   G +  LV +W   + +V  ++        +GE+   +  ++ +M++
Sbjct: 251 WEEARRLLDDMRRQGTEPGLV-TW---NTLVSSYA-------RSGELDVAM-EMLEQMEE 298

Query: 982 LGYVPDT 988
            G  PD 
Sbjct: 299 SGVAPDV 305


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 217/711 (30%), Positives = 366/711 (51%), Gaps = 72/711 (10%)

Query: 401  KMLQACAKVGAFHEGKQIHGYVL---KSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
            ++L+ CA       G+ IHG+++   +S+   ++   N LI++Y +  +   A +VFD M
Sbjct: 36   ELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLM 95

Query: 458  KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
             + N                                   +++W  ++ G+   G    VL
Sbjct: 96   PERN-----------------------------------VVSWCAMMKGYQNSGFDFEVL 120

Query: 518  TLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
             L + M  S   RPN    +VV ++ +    ++ G++ HG  L++GL    +V  +L+ M
Sbjct: 121  KLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYM 180

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
            Y        A  V D++   ++  ++S +SGY   G F    ++L +M +E++  D +++
Sbjct: 181  YSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITY 240

Query: 637  NSLVS---------------------GYSIWGQSKEALVIIHHMKNSGIYP--------- 666
             S +                      G++   ++  A++ ++      +Y          
Sbjct: 241  LSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHA 300

Query: 667  -NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
             N+V  T+++    Q++++ E+L  F +M  +++ PN  T +  L +   L LL++G  +
Sbjct: 301  QNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLL 360

Query: 726  HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
            H L LK+G+     V   L++MY+KSG+++ AR+ F     + + +WN MI GF+ +G G
Sbjct: 361  HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLG 420

Query: 786  KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
            +E +  F  ++  G  P+ ITF  +L AC + G VE+G  YF+ +   +N+ P ++HY+C
Sbjct: 421  REGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTC 480

Query: 846  MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE-IASRRLFKLEPC 904
            +V LL KAG   +A DF+RT P + D   W ALL +C +  +    + +A   ++K  P 
Sbjct: 481  IVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKY-PN 539

Query: 905  NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPA 964
            +S  Y L+ N+ A S  WE V  +R  M++ GVK     SWI I    HVF AE   HP 
Sbjct: 540  DSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPE 599

Query: 965  TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
               IY ++  ++S+++ LGY PD   V+ D+DEE++   L  H+EKLA+ YGLMKT   +
Sbjct: 600  ITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENS 659

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            P+ V KN R+C DCH+A K +S +  R I +RD  RFHHFR+G+CSC D W
Sbjct: 660  PLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 115/563 (20%), Positives = 248/563 (44%), Gaps = 55/563 (9%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDM--VKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           L + +S H  +I   +   + D+  + SLI  Y++ G+   A K F L   R+   W + 
Sbjct: 47  LRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAM 106

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSR------ILTIILKLCTKLMAFWLGVEVHA 318
           ++ Y++ G +  E+L+++     K ++F         + T++ K C+       G + H 
Sbjct: 107 MKGYQNSGFDF-EVLKLF-----KSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHG 160

Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
             +K G      ++  L+  Y  C     A ++  ++    D  +++  +   L    ++
Sbjct: 161 CFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYC-DLSVFSSALSGYLECGAFK 219

Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
              ++ R M        + T +  L+ C+ +   +  +QIH  +++    S +     +I
Sbjct: 220 EGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAII 279

Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
           +MY +  K+  A RVFD+    N+    +++ +Y      + A +LF+KM++  + P+  
Sbjct: 280 NMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEY 339

Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYI 558
           T+                                   ++ L ++ EL LLK+G   HG +
Sbjct: 340 TF-----------------------------------AISLNSIAELSLLKHGDLLHGLV 364

Query: 559 LRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAK 618
           L++G    + VG +L++MY K+  +++A++ F  M  R+IV WN++I G+   GL     
Sbjct: 365 LKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGL 424

Query: 619 KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH-MKNSGIYPNVVTWTSLISG 677
           +  ++M      P+ +++  ++   S  G  ++ L   +  MK   + P++  +T ++  
Sbjct: 425 EAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGL 484

Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
             +   ++++  F   M+   I+ +     +LL  C      + GK++    +   +  D
Sbjct: 485 LSKAGMFKDAEDF---MRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYK-YPND 540

Query: 738 AYVATGLIDMYSKSGNLKSAREV 760
           + V   L ++++KS   +   EV
Sbjct: 541 SGVYVLLSNIHAKSREWEGVAEV 563



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 221/527 (41%), Gaps = 75/527 (14%)

Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI---KRGFDFDVHLKCALMNFYGKCRD 344
           K  +F    L  +LK+C        G  +H  LI   +     DV+   +L+N Y KC +
Sbjct: 25  KKPLFPIDRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGE 84

Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE-NAIKLFREMQFSSAKAISRTIVKML 403
              A K+F  +   E +++    +M   +N  ++   +KLF+ M FS     +  +  ++
Sbjct: 85  TVRARKVFDLMP--ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVV 142

Query: 404 -QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            ++C+  G   EGKQ HG  LKS L S+  V N L+ MYS  +    A RV D +   +L
Sbjct: 143 FKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDL 202

Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
           S ++S +S Y   G       +  +M    +  D IT+                L+ LR 
Sbjct: 203 SVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITY----------------LSCLR- 245

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
                               + LR L   R+ H  ++R G + ++    ++++MY K   
Sbjct: 246 ------------------LCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGK 287

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----LVSWNS 638
           +  AQ VFDN   +NIV   +++  Y     F  A  + ++M+ +E+ P+     +S NS
Sbjct: 288 VLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNS 347

Query: 639 LV-----------------SGYSIWGQSKEALVIIHHMKNS----------GIYPNVVTW 671
           +                  SGY        ALV ++    S            + ++VTW
Sbjct: 348 IAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTW 407

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
            ++I G   +   RE L+ F +M      PN  T   +LQ C  +G ++ G       +K
Sbjct: 408 NTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMK 467

Query: 732 NGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMI 776
              ++ D    T ++ + SK+G  K A +  R +  +  + +W  ++
Sbjct: 468 KFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALL 514



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 706 MSSLLQTCGGLGLLQNGKEIH---CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
           ++ LL+ C     L+ G+ IH    +  ++   KD Y    LI++Y K G    AR+VF 
Sbjct: 34  LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93

Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG-FQPDAITFTALLAACKNSGLVE 821
               + + SW  M+ G+   G   E + LF  ++ +   +P+    T +  +C +SG +E
Sbjct: 94  LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153

Query: 822 EGWKY 826
           EG ++
Sbjct: 154 EGKQF 158


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 229/682 (33%), Positives = 350/682 (51%), Gaps = 48/682 (7%)

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N ++S  S+  +++ A ++FD M D +  SWN+MI +Y   G ++ A  LF +       
Sbjct: 45   NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIR--- 101

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
               ITW+ L+SG+  +G     L L   MQ  G RPN  +   VL+  +   LL+ G++ 
Sbjct: 102  -SCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQI 160

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGL 613
            H + ++   D + +V T L+DMY K  C+  A+ +F+   + RN V W ++++GY   G 
Sbjct: 161  HAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGD 220

Query: 614  FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTS 673
               A +    M  E I+ +  ++ S+++             +   +  SG   NV   ++
Sbjct: 221  GHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSA 280

Query: 674  LISGSLQNENYRESLKFFIQMQQED-IKPNSTTMSSLLQTCGGLG--LLQNGKEIHCLCL 730
            L+    +  +   + +    M+ +D +  NS  +  + Q   GLG   L   + +H   +
Sbjct: 281  LVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQ---GLGEEALSLFRIMHLRHM 337

Query: 731  K-NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAI 789
            K + F   + V   L+DMY+K G    A +VF K  +K + SW  ++ G    G+ +EA+
Sbjct: 338  KIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEAL 397

Query: 790  LLFHELLETGFQPDAITFTALLAACKNS--------GLVEE------------------- 822
             LF E+   G  PD I   A+L+A  NS        G +E+                   
Sbjct: 398  RLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTAL 457

Query: 823  ---------GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
                     G  YF SM   Y I P  EHY+CM+DLLG++G L EA + +  M  +PDAT
Sbjct: 458  IVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDAT 517

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            +W ALL +CR+HG++E  E A+  LF+LEP N+  Y L+ NL + + +WE+  + R  M 
Sbjct: 518  VWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMK 577

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
              GV      SWI++   VH F +E   HP T EIY ++  ++  +K+ GYVPD      
Sbjct: 578  LRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALH 637

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D+DEE K   L  H+EKLA+ +GL+     APIR+ KN R+C DCHTA KY+S V  R +
Sbjct: 638  DMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHV 697

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             LRD   FHHFREG CSC+D W
Sbjct: 698  ILRDSNCFHHFREGACSCSDYW 719



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 211/487 (43%), Gaps = 79/487 (16%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y   G    A K F+    RS   WSS +  Y  +G +V E LE++ E+  +G  
Sbjct: 77  TMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDV-EALELFWEMQYEGER 135

Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                   +L++C+  +    G ++HA  IK  FD +  +   L++ Y KC+ +  A  L
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195

Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
           F    D  + +LW  ++    +N     AI+ FR+M+    +    T   +L AC  + A
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISA 255

Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
              G Q+HG +++S   +N+ V + L+ MYS+   L  A R+ ++M+  +  SWNSMI  
Sbjct: 256 CGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVG 315

Query: 472 ----------------------------------------YTGLGYVDVAWSLFNKMNSS 491
                                                   Y   GY D A+ +F KM   
Sbjct: 316 CVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDK 375

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
               D+I+W  L++G   +GSY+  L L   M+ +G  P+   ++ VL A+         
Sbjct: 376 ----DVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALD-------- 423

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
                               SL+ MY K  C+++A +VFD+M+ ++++ W +LI GY   
Sbjct: 424 -------------------NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQN 464

Query: 612 GLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT 670
           G     +     MEE   IKP    +  ++      G+  EA  +++ M    + P+   
Sbjct: 465 G---RGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM---AVQPDATV 518

Query: 671 WTSLISG 677
           W +L++ 
Sbjct: 519 WKALLAA 525


>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14050,
            mitochondrial; Flags: Precursor
 gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 207/676 (30%), Positives = 352/676 (52%), Gaps = 76/676 (11%)

Query: 403  LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
            LQ CA+       K +H +++K  +     + N L+++Y +      A +VFD M   + 
Sbjct: 10   LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69

Query: 463  SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
             +W S++++              N+ N              LSG       + +      
Sbjct: 70   IAWASVLTA-------------LNQAN--------------LSG-------KTLSVFSSV 95

Query: 523  MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
              S G RP+    S +++A   L  + +GR+ H + + +    D  V +SL+DMY K   
Sbjct: 96   GSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGL 155

Query: 583  LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
            L +A+ VFD+++ +N +                                   SW ++VSG
Sbjct: 156  LNSAKAVFDSIRVKNTI-----------------------------------SWTAMVSG 180

Query: 643  YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP- 701
            Y+  G+ +EAL +   +    +Y    +WT+LISG +Q+    E+   F +M++E +   
Sbjct: 181  YAKSGRKEEALELFRILPVKNLY----SWTALISGFVQSGKGLEAFSVFTEMRRERVDIL 236

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
            +   +SS++  C  L     G+++H L +  GF    +++  LIDMY+K  ++ +A+++F
Sbjct: 237  DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIF 296

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             +  ++ + SW  +I+G A +G  ++A+ L+ +++  G +P+ +TF  L+ AC + G VE
Sbjct: 297  SRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G + F SM+ DY I P+++HY+C++DLLG++G LDEA + I TMPF PD   W ALL +
Sbjct: 357  KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416

Query: 882  CRIHGHLEYA-EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
            C+  G  +    IA   +   +  + + Y L+ N+ A ++ W  V   R  + E+ V+  
Sbjct: 417  CKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKD 476

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK-KLGYVPDTRCVYQDIDEEE 999
               S +++ +   VF A    HP   +I+  L  L  EM+ + GYVPDT  +  D+DE+E
Sbjct: 477  PGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQE 536

Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
            K K+L  H+E+ A+ YGL+K     PIR++KN RVC DCH   K++S +  REI +RD  
Sbjct: 537  KEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDAT 596

Query: 1060 RFHHFREGECSCNDCW 1075
            R+HHF+ G+CSCND W
Sbjct: 597  RYHHFKGGKCSCNDFW 612



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 210/474 (44%), Gaps = 27/474 (5%)

Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
           L+LC +         +HA ++K G      L   L+N YGKC     A ++F E+    D
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH-RD 68

Query: 361 DLLWNEIIM-VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
            + W  ++  +   N   +           S  +        +++ACA +G+   G+Q+H
Sbjct: 69  HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128

Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
            + + S   ++  V + L+ MY++   L  A  VFDS++  N  SW +M+S Y   G  +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188

Query: 480 VAWSLFNKMNSSRIQP--DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV-S 536
            A  LF      RI P  ++ +W  L+SG    G      ++   M+          V S
Sbjct: 189 EALELF------RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 242

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            ++ A   L     GR+ HG ++  G D  +++  +L+DMY K   +  A+++F  M++R
Sbjct: 243 SIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR 302

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           ++V+W SLI G    G    A  + + M    +KP+ V++  L+   S  G  ++   + 
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362

Query: 657 HHM-KNSGIYPNVVTWTSLI-----SGSL-QNENYRESLKFFIQMQQEDIKPNSTTMSSL 709
             M K+ GI P++  +T L+     SG L + EN   ++ F          P+  T ++L
Sbjct: 363 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPF---------PPDEPTWAAL 413

Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
           L  C   G  Q G  I    + +  +KD      L ++Y+ +       E  RK
Sbjct: 414 LSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRK 467



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 156/360 (43%), Gaps = 35/360 (9%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           R L++ K+ HA ++K+G I     +  +L+  Y + G  + A + F     R +  W+S 
Sbjct: 17  RTLTTAKALHAHIVKLG-IVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASV 75

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           L          + L          G+     + + ++K C  L +   G +VH   I   
Sbjct: 76  LTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSE 135

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           +  D  +K +L++ Y KC  + SA  +F  +  +++ + W  ++    ++ + E A++LF
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR-VKNTISWTAMVSGYAKSGRKEEALELF 194

Query: 385 REM-----------------------QFSSAKAISRTIVKMLQ---------ACAKVGAF 412
           R +                        FS    + R  V +L          ACA + A 
Sbjct: 195 RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAAS 254

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G+Q+HG V+    +S + + N LI MY++ + +  A  +F  M+  ++ SW S+I   
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314

Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPN 531
              G  + A +L++ M S  ++P+ +T+  L+      G  +    L + M +  G RP+
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 176/410 (42%), Gaps = 43/410 (10%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGV- 290
           +++  Y + G    A + F +   ++   W++ +  +    G+  E   V+ E+  + V 
Sbjct: 176 AMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQ-SGKGLEAFSVFTEMRRERVD 234

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
           I    +L+ I+  C  L A   G +VH  +I  GFD  V +  AL++ Y KC DV +A  
Sbjct: 235 ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKD 294

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           +FS +    D + W  +I+   ++ + E A+ L+ +M     K    T V ++ AC+ VG
Sbjct: 295 IFSRMRH-RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVG 353

Query: 411 AFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
              +G+++   + K   +  +L    CL+ +  R+  L+ A  +  +M    +  +W ++
Sbjct: 354 FVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAAL 413

Query: 469 ISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF 528
           +S+    G   +   + + + SS    D  T+  L + + +   +  V    R +  +  
Sbjct: 414 LSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEV 473

Query: 529 RPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQE 588
           R +    SV ++  TE  +   G  SH                      +K D  +  ++
Sbjct: 474 RKDPGHSSVEVRKETE--VFYAGETSHP---------------------LKEDIFRLLKK 510

Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           + + M+ RN              G   +   +L+ M+E+E K  L+ W+S
Sbjct: 511 LEEEMRIRN--------------GYVPDTSWILHDMDEQE-KEKLLFWHS 545


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 207/584 (35%), Positives = 307/584 (52%), Gaps = 42/584 (7%)

Query: 530  PNGSSVSVVLQAVTELRL---LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            PN S +++ +   +  RL   L+ G + H   L+     + +V TSL+ +Y K   L  A
Sbjct: 66   PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 125

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------LVSW 636
            Q VFD M + + V W +LI+ Y   G    A  +        ++PD              
Sbjct: 126  QRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARI 185

Query: 637  NSLVSGYSIW-------------------------GQSKEALVIIHHMKNSGIYPNVVTW 671
              L +G ++W                         G+  +A  +   M+    + + V W
Sbjct: 186  ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMR----HKDAVAW 241

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             +++ G   N + RE+L  F+ MQ E +KP+   ++  L  C  LG L  G++   +   
Sbjct: 242  GAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDW 301

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            + F+ +  + T LIDMY+K G+   A  VF++   K +  WN MI+G  + G+ K A  L
Sbjct: 302  DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFAL 361

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
              ++ ++G + +  TF  LL +C ++GL+++G +YF +M+  Y+I P IEHY CMVDLL 
Sbjct: 362  VGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLS 421

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L EA   +  MP   +A I GALLG C+IH + E AE   ++L  LEP NS NY +
Sbjct: 422  RAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVM 481

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ +   RWED  +LR  M   GV+ V   SW++ +  VH F      HP + +IY +
Sbjct: 482  LSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKK 541

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            L  L  EMK +GY P T  V  D+++EEK   L+ H+EKLAI + L+ T     IRV KN
Sbjct: 542  LDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKN 601

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVCSDCHTA K +S +  REI +RD  RFH FR+G CSCND W
Sbjct: 602  LRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 163/405 (40%), Gaps = 79/405 (19%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+Q+H   LK    +N  V   L+S+Y++   L  A RVFD M                 
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMP---------------- 133

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                               P  + W  L++ +   G  +  + + R   + G RP+  +
Sbjct: 134 -------------------HPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFT 174

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
              VL A   +  L  G        + G+   ++V T+ +D+YVK   +  A+EVFD M+
Sbjct: 175 AVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMR 234

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------- 632
           +++ VAW +++ GY   G    A  +   M+ E +KPD                      
Sbjct: 235 HKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ 294

Query: 633 ---LVSWN----------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
              +V W+          +L+  Y+  G + EA V+   M+      +++ W ++I G  
Sbjct: 295 AIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKK----DIIVWNAMILGLG 350

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
              + + +     QM++  +K N  T   LL +C   GL+Q+G+       K   I    
Sbjct: 351 MTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 410

Query: 740 VATG-LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
              G ++D+ S++G L+ A ++     +      N +I+G  + G
Sbjct: 411 EHYGCMVDLLSRAGLLQEAHQLV----DDMPMPANAVILGALLGG 451



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 142/335 (42%), Gaps = 37/335 (11%)

Query: 297 LTIILKLCTKL-MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
           + I LK  ++L      G ++HA  +K     + H+  +L++ Y KC  +  A ++F E+
Sbjct: 73  IPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEM 132

Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
                 + W  +I   +       A+ + R    +  +  S T V++L ACA++     G
Sbjct: 133 PH-PSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG 191

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
           + +     +  +  ++ V    + +Y +  ++  A  VFD M+  +  +W +M+  Y   
Sbjct: 192 ETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASN 251

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G+   A  LF  M                                   Q+ G +P+  +V
Sbjct: 252 GHPREALDLFLAM-----------------------------------QAEGMKPDCYAV 276

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
           +  L A T L  L  GR++   +  +    +  +GT+L+DMY K      A  VF  M+ 
Sbjct: 277 AGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRK 336

Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           ++I+ WN++I G    G    A  ++ QME+  +K
Sbjct: 337 KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 371



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 118/281 (41%), Gaps = 3/281 (1%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA+ +K+    N   ++ SL+  Y + G    A + F      S   W++ +  Y    G
Sbjct: 94  HARSLKLPSHTNPH-VLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD-AG 151

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           +++E + V       G+   S     +L  C ++     G  V  +  + G    V +  
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVAT 211

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           A ++ Y KC ++  A ++F ++   +D + W  ++     N     A+ LF  MQ    K
Sbjct: 212 AAVDLYVKCGEMAKAREVFDKMRH-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMK 270

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                +   L AC ++GA   G+Q    V       N  +   LI MY++      A  V
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVV 330

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           F  M+  ++  WN+MI      G+  +A++L  +M  S ++
Sbjct: 331 FQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 371


>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
          Length = 794

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 226/780 (28%), Positives = 393/780 (50%), Gaps = 43/780 (5%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS-RSYADWSS 263
           R L + +  HAQ++K G  +  ++ +++ +  +    D    A+  F     R+   W++
Sbjct: 48  RDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAA 107

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +   +   G  +  L  + E+   G+   + ++  + K C  L     G  VH  + K 
Sbjct: 108 II-GVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKA 166

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G    V +  +L + YGKC  ++ A K+F  + D  + + WN +++  ++N   E AI+L
Sbjct: 167 GLHHCVFVASSLADMYGKCGVLDDARKVFDYIPD-RNAVAWNALMVGYVQNGMNEEAIRL 225

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
             EM+    +    T+   L A A +G   EGKQ H   + + LE +  +   +++ Y +
Sbjct: 226 LSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCK 285

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
              +E A  +FD M                                   I+ D++TWN L
Sbjct: 286 VGLIEYAEMIFDGM-----------------------------------IEKDVVTWNLL 310

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           +SG+   G  +  + + + M+    + +  ++S ++ A T  + LK G+E   Y +R+GL
Sbjct: 311 ISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGL 370

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           + D+ + ++ +DMY K   + NA++VFD+   ++++ WN+L+S Y   GL   A ++  +
Sbjct: 371 ESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYE 430

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M+ E + P++++WN ++      GQ  EA  +   M++SGI+PN+++WT++++G +QN  
Sbjct: 431 MQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGC 490

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVAT 742
             E++ F  +MQ+  ++PN+ T++  L  C  L  L  G+ IH   ++N  +   A + T
Sbjct: 491 SEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSASIET 550

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+DMY+K G++  A  VF       L  +N MI  +A+YG  +EAI L+  L + G +P
Sbjct: 551 SLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKP 610

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D IT T+LL +C     V +  + F  M + + + P +EHY  MVDLL  AG  D+A   
Sbjct: 611 DNITITSLL-SCNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRL 669

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
           +  MP+KPDA +  +L  SC      E  E  S+ L + EP NS NY ++ N  A+   W
Sbjct: 670 MEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYAVEGSW 729

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQI---DQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
           ++V ++R  M   G+K     SWIQI   ++ VHVF A    H    EI   L  L+ +M
Sbjct: 730 DEVAKMREMMKVKGLKKKPGCSWIQIKGEEEGVHVFVANDKTHLRNDEIQRMLALLLYDM 789



 Score =  206 bits (524), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 180/708 (25%), Positives = 323/708 (45%), Gaps = 125/708 (17%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESN 430
           +N +   A+ L  EM + + +       ++LQ C        G+QIH  +LK       N
Sbjct: 11  KNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARN 70

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
             +   L+  Y++ + LE+A  +F  ++  N+ SW ++I     +G  + A   F +M  
Sbjct: 71  EYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 130

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
           + I PD                  N +            PN      V +A   L+  ++
Sbjct: 131 NGIFPD------------------NFVV-----------PN------VCKACGALQWSRF 155

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           GR  HGY+ + GL + ++V +SL DMY K   L +A++VFD + +RN VAWN+L+ GY  
Sbjct: 156 GRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQ 215

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE-----ALVIIHHMK----- 660
            G+   A ++L++M +E I+P  V+ ++ +S  +  G  +E     A+ I++ ++     
Sbjct: 216 NGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 275

Query: 661 ---------------------NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
                                +  I  +VVTW  LISG +Q     E++     M++E++
Sbjct: 276 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENL 335

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           K +  T+S+L+        L+ GKEI C C+++G   D  +A+  +DMY+K G++ +A++
Sbjct: 336 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKK 395

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VF  +  K L  WN ++  +A  G   EA+ LF+E+      P+ IT+  ++ +   +G 
Sbjct: 396 VFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQ 455

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWG 876
           V E  + F  M +   I P +  ++ M++ L + G  +EA  F+R M     +P+A    
Sbjct: 456 VNEAKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESRLRPNAFTIT 514

Query: 877 ALLGSC----------RIHGHL----EYAEIAS------------------RRLFKLEPC 904
             L +C           IHG++    +Y+  AS                   R+F  + C
Sbjct: 515 VALSACANLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLC 574

Query: 905 NSAN-YNLMMNLLAMSNRWEDVERLRHSMDEVGVK--SVLVWSWI------QIDQIVHVF 955
           +    YN M++  A+  +  +   L  S+++ GVK  ++ + S +       ++Q + VF
Sbjct: 575 SELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSCNYGRDVNQAIEVF 634

Query: 956 SAEGAPHPATG--EIYFELYHLVSE----------MKKLGYVPDTRCV 991
           S   + H      E Y  +  L++           M+++ Y PD R V
Sbjct: 635 SDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMV 682



 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 181/735 (24%), Positives = 310/735 (42%), Gaps = 149/735 (20%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF---DV 329
           GE++E L +  E+  + +     I   IL+ C        G ++HA ++K+G DF   + 
Sbjct: 13  GEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKG-DFYARNE 71

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           +++  L+ FY KC  +E A  LFS++  + +   W  II VK R    E A+  F EM  
Sbjct: 72  YIETKLVIFYAKCDALEIAQVLFSKLR-VRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 130

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           +     +  +  + +AC  +     G+ +HGYV K+ L   + V + L  MY +   L+ 
Sbjct: 131 NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDD 190

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VFD + D N  +WN+++  Y   G  + A  L ++M    I+P  +T          
Sbjct: 191 ARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVT---------- 240

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                    VS  L A   +  ++ G++SH   + NGL+ D  +
Sbjct: 241 -------------------------VSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 275

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GTS+++ Y K   ++ A+ +FD M  +++V WN LISGY  +GL   A  M   M  E +
Sbjct: 276 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENL 335

Query: 630 KPDLVSWNSLVSGYSI-----WGQSKEALVIIHHMK------------------------ 660
           K D V+ ++L+S  +       G+  +   I H ++                        
Sbjct: 336 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKK 395

Query: 661 --NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
             +S +  +++ W +L+S    +    E+L+ F +MQ E + PN  T + ++     L L
Sbjct: 396 VFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLII-----LSL 450

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK----TLASWNC 774
           L+NG+                              +  A+E+F +  +      L SW  
Sbjct: 451 LRNGQ------------------------------VNEAKEMFLQMQSSGIFPNLISWTT 480

Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN----------SGLVEEGW 824
           M+ G    G  +EAIL   ++ E+  +P+A T T  L+AC N           G +    
Sbjct: 481 MMNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQ 540

Query: 825 KYFDSMSTDYNII---------------------PTIEHYSCMVDLLGKAGYLDEAWDFI 863
           +Y  S S + +++                       +  Y+ M+      G + EA    
Sbjct: 541 QYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLY 600

Query: 864 RTMP---FKPDATIWGALLGSCRIHGHLEYA-EIASRRLFK--LEPCNSANYNLMMNLLA 917
           R++     KPD     +LL SC     +  A E+ S  + K  ++PC   +Y LM++LLA
Sbjct: 601 RSLEDGGVKPDNITITSLL-SCNYGRDVNQAIEVFSDMVSKHGMKPC-LEHYGLMVDLLA 658

Query: 918 MSNRWEDVERLRHSM 932
            +   +   RL   M
Sbjct: 659 SAGETDKALRLMEEM 673



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 12/211 (5%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG- 733
           +S   +N   RE+L    +M   +I+        +LQ C     L  G++IH   LK G 
Sbjct: 6   VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 65

Query: 734 -FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
            + ++ Y+ T L+  Y+K   L+ A+ +F K   + + SW  +I      G G+ A++ F
Sbjct: 66  FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGF 125

Query: 793 HELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH----YSCMVD 848
            E+LE G  PD      +   CK  G ++  W  F      Y     + H     S + D
Sbjct: 126 VEMLENGIFPDNFVVPNV---CKACGALQ--WSRFGRGVHGYVAKAGLHHCVFVASSLAD 180

Query: 849 LLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
           + GK G LD+A      +P + +A  W AL+
Sbjct: 181 MYGKCGVLDDARKVFDYIPDR-NAVAWNALM 210


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 199/562 (35%), Positives = 315/562 (56%), Gaps = 38/562 (6%)

Query: 552  RESHGYILRNGLDY-DLYVGTSLMDMYVK---NDCLQNAQEVFDNM-KNRNIVAWNSLIS 606
            R+ H + +R+G+   D  +G  L+   V       +  A +VF  + K  N+  WN+LI 
Sbjct: 34   RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 607  GYCFKGLFVNAKKMLNQMEEEE-IKPDLVSWNSLVSGYSIW-----GQSKEALVI----- 655
            GY   G  ++A  +  +M     ++PD  ++  L+   +       G++  ++VI     
Sbjct: 94   GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153

Query: 656  -IHHMKNS--GIYPN------------------VVTWTSLISGSLQNENYRESLKFFIQM 694
             + +++NS   +Y N                  +V W S+I+G  +N    E+L  + +M
Sbjct: 154  SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
              + IKP+  T+ SLL  C  +G L  GK +H   +K G  ++ + +  L+D+Y++ G +
Sbjct: 214  NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET-GFQPDAITFTALLAA 813
            + A+ +F +  +K   SW  +I+G A+ G GKEAI LF  +  T G  P  ITF  +L A
Sbjct: 274  EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333

Query: 814  CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
            C + G+V+EG++YF  M  +Y I P IEH+ CMVDLL +AG + +A+++I++MP +P+  
Sbjct: 334  CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393

Query: 874  IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
            IW  LLG+C +HG  + AE A  ++ +LEP +S +Y L+ N+ A   RW DV+++R  M 
Sbjct: 394  IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453

Query: 934  EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
              GVK V   S +++   VH F      HP +  IY +L  +   ++  GYVP    VY 
Sbjct: 454  RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513

Query: 994  DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
            D++EEEK   ++ H+EK+AI + L+ T  R+PI V+KN RVC+DCH A K +S V  REI
Sbjct: 514  DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573

Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
             +RD +RFHHF+ G CSC D W
Sbjct: 574  VVRDRSRFHHFKNGSCSCQDYW 595



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 155/314 (49%), Gaps = 10/314 (3%)

Query: 198 LNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRS 257
           L +T     ++ ++  HA  I+ G   +  ++ K LIF+ +        + A  + FS+ 
Sbjct: 21  LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV-FSKI 79

Query: 258 YAD-----WSSFLEDYESFGGEVQELLEVWGELHGKGVI-FRSRILTIILKLCTKLMAFW 311
                   W++ +  Y   G  +     ++ E+   G++   +     ++K  T +    
Sbjct: 80  EKPINVFIWNTLIRGYAEIGNSISAF-SLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG  +H+ +I+ GF   ++++ +L++ Y  C DV SA K+F ++ + +D + WN +I   
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGF 197

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             N K E A+ L+ EM     K    TIV +L ACAK+GA   GK++H Y++K  L  NL
Sbjct: 198 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
              N L+ +Y+R  ++E A  +FD M D N  SW S+I      G+   A  LF  M S+
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 317

Query: 492 R-IQPDIITWNCLL 504
             + P  IT+  +L
Sbjct: 318 EGLLPCEITFVGIL 331



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 166/369 (44%), Gaps = 41/369 (11%)

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS-AKAISRTIVKMLQAC 406
           A+K+FS++    +  +WN +I          +A  L+REM+ S   +  + T   +++A 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
             +     G+ IH  V++S   S + V N L+ +Y+    +  A +VFD M + +L +WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
           S+I+ +   G  + A +L+ +MNS  I+PD                              
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPD------------------------------ 221

Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
                G ++  +L A  ++  L  G+  H Y+++ GL  +L+    L+D+Y +   ++ A
Sbjct: 222 -----GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276

Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE-IKPDLVSWNSLVSGYSI 645
           + +FD M ++N V+W SLI G    G    A ++   ME  E + P  +++  ++   S 
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336

Query: 646 WGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            G  KE       M+    I P +  +  ++    +    +++ ++   M    ++PN  
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP---MQPNVV 393

Query: 705 TMSSLLQTC 713
              +LL  C
Sbjct: 394 IWRTLLGAC 402



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 147/332 (44%), Gaps = 43/332 (12%)

Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGF-RPNGSSVSVVLQAVTELRLLKYGRES 554
           ++  WN L+ G+   G+  +  +L R M+  G   P+  +   +++AVT +  ++ G   
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
           H  ++R+G    +YV  SL+ +Y     + +A +VFD M  +++VAWNS+I+G+   G  
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 615 VNAKKMLNQMEEEEIKPD-----------------------------------LVSWNSL 639
             A  +  +M  + IKPD                                   L S N L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263

Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ-ED 698
           +  Y+  G+ +EA  +   M +     N V+WTSLI G   N   +E+++ F  M+  E 
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSA 757
           + P   T   +L  C   G+++ G E      +   I+      G ++D+ +++G +K A
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379

Query: 758 REVFRK-SANKTLASWNCMIMGFAIYGNGKEA 788
            E  +       +  W  ++    ++G+   A
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 242/862 (28%), Positives = 402/862 (46%), Gaps = 105/862 (12%)

Query: 210  VKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY 268
            V   HA+ I  G     D +V +L+   Y + G    A + F    +R    W + L  Y
Sbjct: 61   VPEIHAKAITRG--LGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 269  ESFG-GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
               G GE  E L ++ ++H  GV+    +L+ +L  CTK   F  G  VHA   K+GF  
Sbjct: 119  AQNGLGE--EALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCS 176

Query: 328  DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
            +  +  AL+  Y +C     A ++F ++    D + +N +I    +    E+A+++F EM
Sbjct: 177  ETFVGNALITLYLRCGSFRLAERVFYDMPH-RDTVTFNTLISGHAQCAHGEHALEIFEEM 235

Query: 388  QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
            Q S       TI  +L ACA +G   +G Q+H Y+ K+ + S+  +   L+ +Y +   +
Sbjct: 236  QSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDV 295

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            E A  +F+                            L N+ N       ++ WN +L   
Sbjct: 296  ETALVIFN----------------------------LGNRTN-------VVLWNLILVAF 320

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                       L   MQ+ G RPN  +   +L+  T    +  G + H   ++ G + D+
Sbjct: 321  GQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDM 380

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            YV   L+DMY K   L+ A+ V + +K +++V+W S+I+GY       +A     +M++ 
Sbjct: 381  YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKC 440

Query: 628  EIKPDLVS-----------------------------------WNSLVSGYSIWGQSKEA 652
             I PD +                                    WN+LV+ Y+  G+ +EA
Sbjct: 441  GIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREA 500

Query: 653  LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
                  ++    + + +TW  L+SG  Q+  + E+LK F++M Q  +K N  T  S L  
Sbjct: 501  FSSFEEIE----HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
               L  ++ GK+IH   +K G   +  V   LI +Y K G+ + A+  F + + +   SW
Sbjct: 557  SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSW 616

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            N +I   + +G G EA+  F ++                         +EG  YF SMS 
Sbjct: 617  NTIITSCSQHGRGLEALDFFDQM------------------------KKEGLSYFKSMSD 652

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
             Y I P  +HY+C++D+ G+AG LD A  F+  MP   DA +W  LL +C++H ++E  E
Sbjct: 653  KYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGE 712

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
            +A++ L +LEP +SA+Y L+ N  A++ +W + +++R  M + GV+     SWI++  +V
Sbjct: 713  LAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVV 772

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            H F      HP   +IY  L  +   + K+GY  +   ++ D ++E +    L H+EKLA
Sbjct: 773  HAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLA 832

Query: 1013 IVYGLMKTKSRAPIRVIKNTRV 1034
            + +GLM      P+RVIKN RV
Sbjct: 833  VTFGLMSLPPCMPLRVIKNLRV 854



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLL-QNGKEIHCLCLKNG 733
           ++G L  E+  + L  F    ++         +  L+ C G G   Q   EIH   +  G
Sbjct: 13  LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRG 72

Query: 734 FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
             KD  V   LID+YSK+G +  AR VF + + +   SW  M+ G+A  G G+EA+ L+ 
Sbjct: 73  LGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYR 132

Query: 794 ELLETGFQPDAITFTALLAACKNSGLVEEG 823
           ++   G  P     +++L++C  + L  +G
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 242/793 (30%), Positives = 383/793 (48%), Gaps = 77/793 (9%)

Query: 232  SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
            ++I  Y+  G    A   F    S     W+  +  +   G E+  + E +  +    V 
Sbjct: 266  TVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAI-EYFLNMRKSSVK 324

Query: 292  FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
                 L  +L     +    LG+ VHA  IK G   ++++  +L++ Y KC  +E+A K+
Sbjct: 325  STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384

Query: 352  FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            F E  +  +D+LWN +I     N +    ++LF +M+ S       T   +L  CA    
Sbjct: 385  F-EALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHD 443

Query: 412  FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
               G Q H  ++K  L  NL V N L+ MY++   LE A ++F+ M D            
Sbjct: 444  LEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR----------- 492

Query: 472  YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
                                    D ++WN ++ G+    +      L   M S G   +
Sbjct: 493  ------------------------DNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSD 528

Query: 532  GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
            G+ ++  L+A T +  L  G++ H   ++ GLD  L+ G+SL+DMY K   +++A++VF 
Sbjct: 529  GACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFS 588

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---------- 641
            +M   ++V+ N+LI+GY    L   A  +  +M  + + P  +++ ++V           
Sbjct: 589  SMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTL 647

Query: 642  -----GYSI-WGQSKEALVIIHHMKNSGIYPN-------------------VVTWTSLIS 676
                 G  I WG S E   +   +   G+Y N                   +V WT ++S
Sbjct: 648  GTQFHGQIIKWGFSSEGEYL--GISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMS 705

Query: 677  GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
            G  QN  Y E+LKF+ +M+ +   P+  T  ++L+ C  L  L+ G+ IH L        
Sbjct: 706  GHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765

Query: 737  DAYVATGLIDMYSKSGNLKSAREVFRKSANKT-LASWNCMIMGFAIYGNGKEAILLFHEL 795
            D   +  LIDMY+K G++KS+ +VF +   ++ + SWN +I G+A  G  ++A+ +F  +
Sbjct: 766  DELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825

Query: 796  LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
             ++   PD ITF  +L AC ++G V +G K F+ M   Y I   ++H +CMVDLLG+ GY
Sbjct: 826  RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885

Query: 856  LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
            L EA DFI     KPDA +W +LLG+CRIHG     EIA+ RL +LEP NS+ Y L+ N+
Sbjct: 886  LQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNI 945

Query: 916  LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
             A   RWE+   LR +M + GVK V  +SWI + Q  H+F+A    H   G+I   L  L
Sbjct: 946  YASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDL 1005

Query: 976  VSEMKKLGYV-PD 987
               MK    V PD
Sbjct: 1006 YDLMKDDAVVNPD 1018



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 156/577 (27%), Positives = 266/577 (46%), Gaps = 81/577 (14%)

Query: 308 MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
           +A  +G  VH+  +  G D +  L  A+++ Y KC  V  A K F+ +   +D   WN +
Sbjct: 74  LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE--KDVTAWNSM 131

Query: 368 I----MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           +     +    +   + + LF  + F +      T   +L   A+      G+QIH  ++
Sbjct: 132 LSMYSSIGQPGKVLRSFVSLFENLIFPN----KFTFSIVLSTSARETNVEFGRQIHCSMI 187

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
           K  LE N      L+ MY++ ++L  A RVFD + D N   W  + S Y   G  + A  
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVI 247

Query: 484 LFNKM-------------------------NSSRI------QPDIITWNCLLSGHFTHGS 512
           +F +M                           +R+       PD++ WN ++SGH   G 
Sbjct: 248 VFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGC 307

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
               +     M+    +   S++  VL A+  +  L  G   H   ++ GL  ++YVG+S
Sbjct: 308 EIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAK------- 618
           L+ MY K + ++ A +VF+ ++ RN V WN++I GY   G       LF++ K       
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427

Query: 619 -----------------KMLNQME----EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIH 657
                            +M +Q      ++++  +L   N+LV  Y+  G  ++A  I  
Sbjct: 428 DFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFE 487

Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
           HM +     + V+W ++I G +Q+EN  E+   F++M    I  +   ++S L+ C  + 
Sbjct: 488 HMCDR----DNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVH 543

Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
            L  GK++HCL +K G  +  +  + LIDMYSK G ++ AR+VF      ++ S N +I 
Sbjct: 544 GLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIA 603

Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
           G++   N +EA++LF E+L  G  P  ITF  ++ AC
Sbjct: 604 GYS-QNNLEEAVVLFQEMLTKGVNPSEITFATIVEAC 639



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 238/485 (49%), Gaps = 31/485 (6%)

Query: 415 GKQIHGYVL-------KSALESNLSVCNCLISMYSRN---NKLELATRVFDSMKDHNL-- 462
           G++++G+VL       +  LE  L  C    S    +   ++L LA R+  ++   +L  
Sbjct: 30  GRRVYGHVLPNHDQIHQGLLEICLEQCKLFKSRKVFDEMPHRLALALRIGKAVHSKSLIL 89

Query: 463 ------SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
                    N+++  Y     V  A   FN +     + D+  WN +LS + + G    V
Sbjct: 90  GIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-----EKDVTAWNSMLSMYSSIGQPGKV 144

Query: 517 L-TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
           L + +   ++L F PN  + S+VL        +++GR+ H  +++ GL+ + Y G +L+D
Sbjct: 145 LRSFVSLFENLIF-PNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVD 203

Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
           MY K D L +AQ VFD + + N V W  L SGY   GL   A  +  +M  E  +PD ++
Sbjct: 204 MYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLA 263

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
           + ++++ Y   G+ K+A ++   M +    P+VV W  +ISG  +      ++++F+ M+
Sbjct: 264 FVTVINTYISLGKLKDARLLFGEMPS----PDVVAWNVMISGHGKRGCEIVAIEYFLNMR 319

Query: 696 QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
           +  +K   +T+ S+L   G +  L  G  +H   +K G   + YV + L+ MYSK   ++
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379

Query: 756 SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
           +A +VF     +    WN MI G+A  G   + + LF ++  +G+  D  TFT+LL+ C 
Sbjct: 380 AAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439

Query: 816 NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            S  +E G + F S+     +   +   + +VD+  K G L++A      M  + D   W
Sbjct: 440 VSHDLEMGSQ-FHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR-DNVSW 497

Query: 876 GALLG 880
             ++G
Sbjct: 498 NTIIG 502



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 143/624 (22%), Positives = 270/624 (43%), Gaps = 83/624 (13%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA+ IK+G   N   +  SL+  Y +     +AAK F     R+   W++ +  Y +  G
Sbjct: 350 HAEAIKLGLASNIY-VGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGY-AHNG 407

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           E  +++E++ ++   G        T +L  C       +G + H+ +IK+    ++ +  
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGN 467

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           AL++ Y KC  +E A ++F  + D  D++ WN II   +++E    A  LF  M      
Sbjct: 468 ALVDMYAKCGALEDARQIFEHMCD-RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIV 526

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
           +    +   L+AC  V   ++GKQ+H   +K  L+  L   + LI MYS+   +E A +V
Sbjct: 527 SDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKV 586

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F SM + ++ S N++I+ Y                                    +  + 
Sbjct: 587 FSSMPEWSVVSMNALIAGY------------------------------------SQNNL 610

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD-LYVGTS 572
           +  + L + M + G  P+  + + +++A  +   L  G + HG I++ G   +  Y+G S
Sbjct: 611 EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGIS 670

Query: 573 LMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
           L+ +Y+ +  +  A  +F  + + ++IV W  ++SG+   G +  A K   +M  +   P
Sbjct: 671 LLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALP 730

Query: 632 DLVSW-----------------------------------NSLVSGYSIWGQSKEALVII 656
           D  ++                                   N+L+  Y+  G  K +  + 
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVF 790

Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
             M+      NVV+W SLI+G  +N    ++LK F  M+Q  I P+  T   +L  C   
Sbjct: 791 DEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847

Query: 717 GLLQNGKEIHCLCLKNGFIKDA--YVATGLIDMYSKSGNLKSAREVFRKSANKTLAS-WN 773
           G + +G++I  + +    I+    +VA  ++D+  + G L+ A +       K  A  W+
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVAC-MVDLLGRWGYLQEADDFIEAQNLKPDARLWS 906

Query: 774 CMIMGFAIYGNGKEAILLFHELLE 797
            ++    I+G+     +    L+E
Sbjct: 907 SLLGACRIHGDDMRGEIAAERLIE 930



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 154/723 (21%), Positives = 304/723 (42%), Gaps = 90/723 (12%)

Query: 244 TSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI-LTIILK 302
            S A+  F    +    W+S L  Y S G +  ++L  +  L  + +IF ++   +I+L 
Sbjct: 111 VSYAEKQFNSLEKDVTAWNSMLSMYSSIG-QPGKVLRSFVSLF-ENLIFPNKFTFSIVLS 168

Query: 303 LCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
              +      G ++H S+IK G + + +   AL++ Y KC  +  A ++F  + D  + +
Sbjct: 169 TSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVD-PNTV 227

Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG-- 420
            W  +    ++    E A+ +F  M+    +      V ++     +G   + + + G  
Sbjct: 228 CWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEM 287

Query: 421 --------------------------YVL---KSALESNLSVCNCLISMYSRNNKLELAT 451
                                     Y L   KS+++S  S    ++S       L+L  
Sbjct: 288 PSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347

Query: 452 RVFDSMKDHNLSS----WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
            V        L+S     +S++S Y+    ++ A  +F  +     + + + WN ++ G+
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE----ERNDVLWNAMIRGY 403

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
             +G    V+ L   M+S G+  +  + + +L        L+ G + H  I++  L  +L
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNL 463

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           +VG +L+DMY K   L++A+++F++M +R+ V+WN++I GY        A  +  +M   
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSC 523

Query: 628 EIKPD-----------------------------------LVSWNSLVSGYSIWGQSKEA 652
            I  D                                   L + +SL+  YS  G  ++A
Sbjct: 524 GIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDA 583

Query: 653 LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
             +   M       +VV+  +LI+G  QN N  E++  F +M  + + P+  T +++++ 
Sbjct: 584 RKVFSSMPE----WSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEA 638

Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDA-YVATGLIDMYSKSGNLKSAREVFRK-SANKTLA 770
           C     L  G + H   +K GF  +  Y+   L+ +Y  S  +  A  +F + S+ K++ 
Sbjct: 639 CHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIV 698

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            W  M+ G +  G  +EA+  + E+   G  PD  TF  +L  C     + EG       
Sbjct: 699 LWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIH--- 755

Query: 831 STDYNIIPTIEHYS--CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
           S  +++   ++  +   ++D+  K G +  +      M  + +   W +L+     +G+ 
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYA 815

Query: 889 EYA 891
           E A
Sbjct: 816 EDA 818


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 212/611 (34%), Positives = 327/611 (53%), Gaps = 46/611 (7%)

Query: 508  FTH-GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL--LKYGRESHGYILRNGLD 564
            F+H G +   L   R M   G RP+  + SV+L A+ ++    +  GRE H Y   +GL 
Sbjct: 4    FSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLL 63

Query: 565  YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
             ++ VGT+++ MY K   L +A+  F+ ++ +N V WN++++ Y   G    A ++  +M
Sbjct: 64   PNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREM 123

Query: 625  ---------------------------------------EEEEIKPDLVSWNSLVSGYSI 645
                                                   E +E+  D+V   +L++ YS 
Sbjct: 124  CERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSK 183

Query: 646  WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNST 704
             G  +EA  +   +++     + V W ++I+   Q+   +++L  +  M    D+ P   
Sbjct: 184  CGDLEEARKVFDSIRHDA---DSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T  +++  C  L  L+ G+ IH       F  +  V+  L+ MY K G L  A +VF   
Sbjct: 241  TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
              K   SWN +I  +A +G+  +A+LL+ E+   G +P  +TF  LL+AC + GLV +G 
Sbjct: 301  KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
             YF  M  D+ I P++ H+ C++DLLG+ G L EA   +++MP + +A  W +LLG+C+ 
Sbjct: 361  DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            HG L+    A+ ++    P  S  Y L+ N+ A + RW+DVE++R  M   GVK     S
Sbjct: 421  HGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKS 480

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            WI+I  +VH F +    HP   EIY EL  +V EMK LGYVPDT  V+ D++EEEK  +L
Sbjct: 481  WIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLL 540

Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
            + H+EKLAIVYG M    ++ +R++KN RVC DCHTA K+MS + GR+I +RD ARFH F
Sbjct: 541  VCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLF 600

Query: 1065 REGECSCNDCW 1075
              G CSC D W
Sbjct: 601  ENGSCSCRDYW 611



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 185/416 (44%), Gaps = 44/416 (10%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G E+H      G   +V +  A+++ YGKC  ++ A   F E+   ++ + WN ++    
Sbjct: 50  GREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQ-WKNSVTWNAMMTNYK 108

Query: 373 RNEKWENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LE 428
            + +   A++LFREM  +  SA+    +    ++AC+ +    +G++IH  + +    L 
Sbjct: 109 LDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELH 168

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            ++ V   L++MYS+   LE A +VFDS+                               
Sbjct: 169 KDVVVGTALLNMYSKCGDLEEARKVFDSI------------------------------- 197

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRL 547
              R   D + WN +++ +  HG  +  L L R M  +    P   +   V+    EL  
Sbjct: 198 ---RHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSA 254

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           LK GR  H  +     D +L V  +L+ MY K  CL  A +VF +MK ++ ++WN++IS 
Sbjct: 255 LKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISS 314

Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYP 666
           Y + G    A  +  +M+ + +KP  V++  L+S  S  G   + L   + M++   I P
Sbjct: 315 YAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKP 374

Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
           +V  +  +I    +     E+      M    I+ N+    SLL  C   G L+ G
Sbjct: 375 SVPHFGCIIDLLGRGGRLAEAELVLKSMP---IQANAVQWMSLLGACKTHGDLKRG 427



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 7/285 (2%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + G    A  AF     ++   W++ + +Y+   G  +E LE++ E+  +   
Sbjct: 71  AVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYK-LDGRDREALELFREMCERSRS 129

Query: 292 FRSR--ILTIILKLCTKLMAFWLGVEVHASLIKRGFDF--DVHLKCALMNFYGKCRDVES 347
            R      +I ++ C+ L     G E+H  L + G +   DV +  AL+N Y KC D+E 
Sbjct: 130 ARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEE 189

Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQAC 406
           A K+F  +    D + WN +I    ++ + + A+ L+R M  ++  A  + T V ++  C
Sbjct: 190 ARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVC 249

Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
           A++ A  +G+ IH  V  +  ++NL V N L+ MY +   L+ A  VF SMK  +  SWN
Sbjct: 250 AELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWN 309

Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           ++ISSY   G+ D A  L+ +M+   ++P  +T+  LLS   +HG
Sbjct: 310 TIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSA-CSHG 353



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 199/493 (40%), Gaps = 113/493 (22%)

Query: 380 AIKLFREMQFSSAKA--ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
           A+  FR M  S  +   ++ +++    A     A  +G++IH Y   S L  N+ V   +
Sbjct: 13  ALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAV 72

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           ISMY +  +L+ A   F+ ++  N  +WN+M+++Y   G    A  LF +M         
Sbjct: 73  ISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCE------- 125

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                                     +S   RP+  S S+ ++A + L  L+ GRE H  
Sbjct: 126 --------------------------RSRSARPDKFSFSIAIEACSNLEDLEQGREIHEM 159

Query: 558 ILRNG--LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLF 614
           + R G  L  D+ VGT+L++MY K   L+ A++VFD+++ + + V WN++I+ Y   G  
Sbjct: 160 LRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRG 219

Query: 615 VNAKKMLNQMEE-EEIKP-----------------------------------DLVSWNS 638
             A  +   M +  ++ P                                   +L+  N+
Sbjct: 220 KQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNA 279

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           LV  Y   G   EAL + H MK      + ++W ++IS    + +  ++L  + +M  + 
Sbjct: 280 LVHMYGKCGCLDEALDVFHSMK----LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQG 335

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSA 757
           +KP   T   LL  C   GL+ +G +       +  IK +    G +ID+  + G L  A
Sbjct: 336 VKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEA 395

Query: 758 REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNS 817
             V +                                      Q +A+ + +LL ACK  
Sbjct: 396 ELVLKSMP----------------------------------IQANAVQWMSLLGACKTH 421

Query: 818 GLVEEGWKYFDSM 830
           G ++ G +  D +
Sbjct: 422 GDLKRGVRAADQV 434



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 13/273 (4%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYAD---WS 262
           L   +  H  + + GK  + D +V + + + Y + GD   A K F     R  AD   W+
Sbjct: 150 LEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSI--RHDADSVCWN 207

Query: 263 SFLEDYESFGGEVQELLEVWGELHGK-GVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
           + +  Y   G   ++ L+++  +H    +  +      ++ +C +L A   G  +HA + 
Sbjct: 208 AMIAAYAQHG-RGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVR 266

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
              FD ++ +  AL++ YGKC  ++ A  +F  +  L+D++ WN II     +   + A+
Sbjct: 267 ATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK-LKDEISWNTIISSYAYHGHSDQAL 325

Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN--CLIS 439
            L++EM     K    T V +L AC+  G   +G   + Y ++       SV +  C+I 
Sbjct: 326 LLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD-YFYRMQDDHRIKPSVPHFGCIID 384

Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISS 471
           +  R  +L  A  V  SM    N   W S++ +
Sbjct: 385 LLGRGGRLAEAELVLKSMPIQANAVQWMSLLGA 417


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 196/576 (34%), Positives = 322/576 (55%), Gaps = 34/576 (5%)

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFD 591
            S V  ++ A++    + Y    H  ++++ L+Y D ++G  L+ MY K    ++AQ +FD
Sbjct: 63   SIVQSLVFAISSCTSVSYCSAIHARVIKS-LNYSDGFIGDRLVSMYFKLGYDEDAQRLFD 121

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK-PDLVSWNSLVS-----GYSI 645
             M N+++V+WNSL+SG   +G          +M  E  + P+ V+  S+VS     G   
Sbjct: 122  EMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALD 181

Query: 646  WGQSKEALVIIHHMKNSGIYPN--------------------------VVTWTSLISGSL 679
             G+S   +V+   M       N                          +V+W S++    
Sbjct: 182  EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 241

Query: 680  QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
             N    + +  F  M++  I P+  TM +LL+ C   GL +  + IH    + GF  D  
Sbjct: 242  HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADII 301

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            +AT L+++Y+K G L ++ ++F +  ++   +W  M+ G+A++  G+EAI LF  +++ G
Sbjct: 302  IATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEG 361

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             + D +TFT LL+AC +SGLVEEG KYF+ MS  Y + P ++HYSCMVDLLG++G L++A
Sbjct: 362  VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA 421

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
            ++ I++MP +P + +WGALLG+CR++G++E  +  + +L  L+P +  NY ++ N+ + +
Sbjct: 422  YELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAA 481

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
              W D  ++R  M E  +      S+I+    +H F      HP + EI+ +L  L+ ++
Sbjct: 482  GLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKI 541

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
            ++ G  P T  V  DIDEE K  ++  H+EKLAI +GL+ T S  P+ + KN R+C DCH
Sbjct: 542  REAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCH 601

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + AK+ SL+  R I +RD  RFHHF +G CSC D W
Sbjct: 602  STAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 192/413 (46%), Gaps = 43/413 (10%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +HA +IK     D  +   L++ Y K    E A +LF E+ + +D + WN + M  L   
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN-KDLVSWNSL-MSGLSGR 141

Query: 376 KWENA-IKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
            +  A +  F  M+  S +  +  T++ ++ ACA +GA  EGK +HG V+K  +     V
Sbjct: 142 GYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKV 201

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N LI+MY +   L+ A+++F+ M   +L SWNSM+  +   GY +    LFN M  + I
Sbjct: 202 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGI 261

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            PD  T                ++ LLR     G      S+                  
Sbjct: 262 NPDQAT----------------MVALLRACTDTGLGRQAESI------------------ 287

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H YI R G + D+ + T+L+++Y K   L  ++++F+ +K+R+ +AW ++++GY     
Sbjct: 288 -HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 346

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A K+ + M +E ++ D V++  L+S  S  G  +E       M     + P +  ++
Sbjct: 347 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYS 406

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            ++    ++    ++ +    M  E   P+S    +LL  C   G ++ GKE+
Sbjct: 407 CMVDLLGRSGRLEDAYELIKSMPME---PSSGVWGALLGACRVYGNVELGKEV 456



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 172/381 (45%), Gaps = 55/381 (14%)

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            RV  S+   +    + ++S Y  LGY + A  LF++M +     D+++WN L+SG    
Sbjct: 86  ARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK----DLVSWNSLMSGLSGR 141

Query: 511 GSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           G     L     M++  G +PN  ++  V+ A  ++  L  G+  HG +++ G+     V
Sbjct: 142 GYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKV 201

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI-----SGYCFKGLFVNAKKMLNQM 624
             SL++MY K   L  A ++F+ M  R++V+WNS++     +GY  KG+      + N M
Sbjct: 202 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGM-----DLFNLM 256

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV---------------- 668
           +   I PD  +  +L+   +  G  ++A  I  ++   G   ++                
Sbjct: 257 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 316

Query: 669 ---------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
                          + WT++++G   +   RE++K F  M +E ++ +  T + LL  C
Sbjct: 317 NASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSAC 376

Query: 714 GGLGLLQNGK---EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTL 769
              GL++ GK   EI     +     D Y  + ++D+  +SG L+ A E+ +      + 
Sbjct: 377 SHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSS 434

Query: 770 ASWNCMIMGFAIYGN---GKE 787
             W  ++    +YGN   GKE
Sbjct: 435 GVWGALLGACRVYGNVELGKE 455



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 137/295 (46%), Gaps = 6/295 (2%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA++IK   +  SD  +   L+  Y + G    A + F    ++    W+S +    S  
Sbjct: 85  HARVIK--SLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGL-SGR 141

Query: 273 GEVQELLEVWGELHGK-GVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
           G +   L  +  +  + G       L  ++  C  + A   G  +H  ++K G      +
Sbjct: 142 GYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKV 201

Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
             +L+N YGK   +++A++LF E+  +   + WN ++++   N   E  + LF  M+ + 
Sbjct: 202 VNSLINMYGKLGFLDAASQLFEEMP-VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 260

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
                 T+V +L+AC   G   + + IH Y+ +    +++ +   L+++Y++  +L  + 
Sbjct: 261 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 320

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            +F+ +KD +  +W +M++ Y        A  LF+ M    ++ D +T+  LLS 
Sbjct: 321 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 375


>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 616

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 213/606 (35%), Positives = 328/606 (54%), Gaps = 50/606 (8%)

Query: 476  GYVDVAWSLFNKMNSSRIQ-PDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGFRPNGS 533
            G +D A S+F     SRIQ P+   +  L+ G   T    ++++   R +  L +     
Sbjct: 55   GGLDYASSVF-----SRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVE 109

Query: 534  -SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
             S+  VL+A  +L     GR+ HG +L+  L +D +VG S++ MY+    ++ A+ VFD 
Sbjct: 110  FSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDR 169

Query: 593  MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
            M NR                                   D+VSWNS+++GY   G+ + A
Sbjct: 170  MPNR-----------------------------------DVVSWNSMIAGYLKAGEIELA 194

Query: 653  LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
              +   M +     +VVTWTS+IS  +QN    ++L  F +M    ++P+   + S+L  
Sbjct: 195  KKVFETMSDK----DVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSA 250

Query: 713  CGGLGLLQNGKEIHCLCLKNGF-IKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLA 770
               LG ++ GK +H     N   +   ++ + LIDMYSK G +++A  VFR  S  + + 
Sbjct: 251  IADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIG 310

Query: 771  SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
             WN MI G AI+G  +EA+ +F E+     +P+ ITF  LL+ C + GLVEEG  YF+SM
Sbjct: 311  DWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESM 370

Query: 831  STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
               Y I+P I+HY CM+DL G+AG L++A   I+ MPF+ D   W A+L +   HGH+E 
Sbjct: 371  HEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEI 430

Query: 891  AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
             + A+ R  +L P +S++Y L+ N+ A + RW+DV ++R  M + GVK +   S + ++ 
Sbjct: 431  GKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNG 490

Query: 951  IVHVF-SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTE 1009
             VH F   +      +G++  ++  +VS +K  GY PD   V  DI++E K  +L  H+E
Sbjct: 491  KVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHSE 550

Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
            K+AI +GL+     API ++KN RVC DCH   K +S V  R+I +RD  RFHHF  G C
Sbjct: 551  KMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIMRDQNRFHHFENGCC 610

Query: 1070 SCNDCW 1075
            SCN+ W
Sbjct: 611  SCNEYW 616



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 191/368 (51%), Gaps = 11/368 (2%)

Query: 315 EVHASLIKRGF---DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           ++HA +IK       F V    A  +  G    ++ A+ +FS +      + +  I    
Sbjct: 24  QIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFS 83

Query: 372 LRNEKWENAIKLFREMQ-FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             +   E+ I   R +   + +  +  +I  +L+AC K+ AF EG+Q+HG VLK+ L  +
Sbjct: 84  DTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFD 143

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
             V N ++ MY    ++ELA RVFD M + ++ SWNSMI+ Y   G +++A  +F  M+ 
Sbjct: 144 PFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMS- 202

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
                D++TW  ++S +  +      L L R M SLG RP+G ++  VL A+ +L  ++ 
Sbjct: 203 ---DKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEE 259

Query: 551 GRESHGYILRNGLDYDL-YVGTSLMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLISGY 608
           G+  H Y+  N ++    ++G++L+DMY K   ++NA  VF ++ + RNI  WNS+ISG 
Sbjct: 260 GKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGL 319

Query: 609 CFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPN 667
              GL   A  +  +ME  +I+P+ +++  L+S  S  G  +E       M +   I P 
Sbjct: 320 AIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPR 379

Query: 668 VVTWTSLI 675
           +  +  +I
Sbjct: 380 IQHYGCMI 387



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 55/349 (15%)

Query: 202 NKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLE--FGDFTSAAKAF--------F 251
           +K + L  ++  HAQMIK   + +   + + + F  L    G    A+  F        F
Sbjct: 14  DKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSF 73

Query: 252 LYFS--RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
           ++F+  + ++D S+ +E    +   +  L       +  GV F    +  +LK C KL+A
Sbjct: 74  IFFALIKGFSDTSNPVESLILYARMLSCLN------YSSGVEFS---IPSVLKACGKLLA 124

Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYG----------------------------- 340
           F  G +VH  ++K    FD  +  +++  Y                              
Sbjct: 125 FDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAG 184

Query: 341 --KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRT 398
             K  ++E A K+F  +SD +D + W  +I   ++N     A+ LFREM     +     
Sbjct: 185 YLKAGEIELAKKVFETMSD-KDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPA 243

Query: 399 IVKMLQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSRNNKLELATRVFDSM 457
           IV +L A A +G   EGK +H YV  + +E S+  + + LI MYS+   +E A  VF S+
Sbjct: 244 IVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSI 303

Query: 458 KD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
               N+  WNSMIS     G    A  +F +M    I+P+ IT+  LLS
Sbjct: 304 SHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLS 352


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 207/584 (35%), Positives = 307/584 (52%), Gaps = 42/584 (7%)

Query: 530  PNGSSVSVVLQAVTELRL---LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            PN S +++ +   +  RL   L+ G + H   L+     + +V TSL+ +Y K   L  A
Sbjct: 545  PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 604

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------LVSW 636
            Q VFD M + + V W +LI+ Y   G    A  +        ++PD              
Sbjct: 605  QRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARI 664

Query: 637  NSLVSGYSIW-------------------------GQSKEALVIIHHMKNSGIYPNVVTW 671
              L +G ++W                         G+  +A  +   M++     + V W
Sbjct: 665  ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHK----DAVAW 720

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             +++ G   N + RE+L  F+ MQ E +KP+   ++  L  C  LG L  G++   +   
Sbjct: 721  GAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDW 780

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            + F+ +  + T LIDMY+K G+   A  VF++   K +  WN MI+G  + G+ K A  L
Sbjct: 781  DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFAL 840

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
              ++ ++G + +  TF  LL +C ++GL+++G +YF +M+  Y+I P IEHY CMVDLL 
Sbjct: 841  VGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLS 900

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L EA   +  MP   +A I GALLG C+IH + E AE   ++L  LEP NS NY +
Sbjct: 901  RAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVM 960

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ +   RWED  +LR  M   GV+ V   SW++ +  VH F      HP + +IY +
Sbjct: 961  LSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKK 1020

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            L  L  EMK +GY P T  V  D+++EEK   L+ H+EKLAI + L+ T     IRV KN
Sbjct: 1021 LDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKN 1080

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVCSDCHTA K +S +  REI +RD  RFH FR+G CSCND W
Sbjct: 1081 LRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 155/382 (40%), Gaps = 75/382 (19%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+Q+H   LK    +N  V   L+S+Y++   L  A RVFD M                 
Sbjct: 569 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMP---------------- 612

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                               P  + W  L++ +   G  +  + + R   + G RP+  +
Sbjct: 613 -------------------HPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFT 653

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
              VL A   +  L  G        + G+   ++V T+ +D+YVK   +  A+EVFD M+
Sbjct: 654 AVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMR 713

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------- 632
           +++ VAW +++ GY   G    A  +   M+ E +KPD                      
Sbjct: 714 HKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ 773

Query: 633 ---LVSWN----------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
              +V W+          +L+  Y+  G + EA V+   M+      +++ W ++I G  
Sbjct: 774 AIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKK----DIIVWNAMILGLG 829

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
              + + +     QM++  +K N  T   LL +C   GL+Q+G+       K   I    
Sbjct: 830 MTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 889

Query: 740 VATG-LIDMYSKSGNLKSAREV 760
              G ++D+ S++G L+ A ++
Sbjct: 890 EHYGCMVDLLSRAGLLQEAHQL 911



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/402 (21%), Positives = 168/402 (41%), Gaps = 40/402 (9%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++HA  +K     + H+  +L++ Y KC  +  A ++F E+      + W  +I   +
Sbjct: 569 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPH-PSTVPWTALITAYM 627

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
                  A+ + R    +  +  S T V++L ACA++     G+ +     +  +  ++ 
Sbjct: 628 DAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVF 687

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V    + +Y +  ++  A  VFD M+  +  +W +M+  Y   G+   A  LF  M    
Sbjct: 688 VATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM---- 743

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                                          Q+ G +P+  +V+  L A T L  L  GR
Sbjct: 744 -------------------------------QAEGMKPDCYAVAGALSACTRLGALDLGR 772

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           ++   +  +    +  +GT+L+DMY K      A  VF  M+ ++I+ WN++I G    G
Sbjct: 773 QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTG 832

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
               A  ++ QME+  +K +  ++  L+   +  G  ++     H+M K   I P +  +
Sbjct: 833 HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHY 892

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++    +    +E+ +    M    +  N+  + +LL  C
Sbjct: 893 GCMVDLLSRAGLLQEAHQLVDDMP---MPANAVILGALLGGC 931



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 3/288 (1%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L + +  HA+ +K+    N   ++ SL+  Y + G    A + F      S   W++ + 
Sbjct: 566 LRAGEQLHARSLKLPSHTNPH-VLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALIT 624

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y    G+++E + V       G+   S     +L  C ++     G  V  +  + G  
Sbjct: 625 AYMD-AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 683

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
             V +  A ++ Y KC ++  A ++F ++   +D + W  ++     N     A+ LF  
Sbjct: 684 QSVFVATAAVDLYVKCGEMAKAREVFDKMRH-KDAVAWGAMVGGYASNGHPREALDLFLA 742

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           MQ    K     +   L AC ++GA   G+Q    V       N  +   LI MY++   
Sbjct: 743 MQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 802

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              A  VF  M+  ++  WN+MI      G+  +A++L  +M  S ++
Sbjct: 803 TVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 850


>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
          Length = 826

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 225/778 (28%), Positives = 397/778 (51%), Gaps = 39/778 (5%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           R L + K  HA+++K G  +  ++ +++ L+  Y +   F ++   F     R+   W++
Sbjct: 82  RDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAA 141

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +   +   G  +E L  + E+    +   + ++  + K C  L     G  VH  ++K 
Sbjct: 142 II-GVKCRIGLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKS 200

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G    V +  +L + YGKC  ++ A K+F E+ +  + + WN +++  ++N   E AI+L
Sbjct: 201 GLHDCVFVASSLADMYGKCGVLDDARKVFDEIPE-RNVVAWNALMVGYVQNGMNEEAIRL 259

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
             +M+    +    T+   L A A +    EGKQ H   + + LE               
Sbjct: 260 LSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLE--------------- 304

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
                          D+ L + N  ++ Y  +G ++ A  +F++M    I+ D++TWN L
Sbjct: 305 --------------LDNILGTSN--LNFYCKVGLIEYAEMIFDRM----IEKDVVTWNLL 344

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           +SG+   G  ++ + + + M+    + +  ++S ++ A    + LK G+E   Y +R+  
Sbjct: 345 ISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSF 404

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
             D+ + ++ +DMY     + +A++VFD++  ++++ WN+L+S Y   GL   A ++  +
Sbjct: 405 ASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYE 464

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M+ E + P+ ++WN ++  +   GQ  EA  I   M++SGI+PN+V+WT++++G +QN  
Sbjct: 465 MQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLVQNGC 524

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG-FIKDAYVAT 742
             E++ F  +MQ+  ++PN+ +++  L  C  L  L  G+ +H   ++N        + T
Sbjct: 525 SEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIET 584

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+DMY+K G++  A  VFR      L  +N MI  +A+ GN KEAI L   L +TG +P
Sbjct: 585 SLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKP 644

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D ITFT+LL+AC ++G V +  + F  M + + I P +EHY  MVD+L  AG  D+A   
Sbjct: 645 DNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRL 704

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
           I  MP+K DA +  +L+ SC +    E  +  SR L + EP NS NY  + N  A+   W
Sbjct: 705 IEEMPYKSDARMIQSLVASCNMKHKTELMDFLSRHLLETEPENSGNYVTISNAYAVEGSW 764

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
           ++V + R  M    +K     SWI+I   VHVF A    H    EI   L  L  +M+
Sbjct: 765 DEVVKTREMMKAKRLKKSPGCSWIRIKGGVHVFVANDKTHLRNKEIRSILALLAYDMQ 822



 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 251/539 (46%), Gaps = 72/539 (13%)

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESNLSVCNCL 437
           A+ L  EM F   +       ++LQ C        GKQIH  +LK+      N  +   L
Sbjct: 52  ALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETKL 111

Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
           +  Y++ +  E +  +F  ++  N+ SW ++I     +G  + A   F +M  + I PD 
Sbjct: 112 VIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLCEEALMGFVEMLQNEIFPD- 170

Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
                            N +            PN      V +A   L+  ++GR  HGY
Sbjct: 171 -----------------NFVV-----------PN------VCKACGALQWSRFGRGVHGY 196

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
           ++++GL   ++V +SL DMY K   L +A++VFD +  RN+VAWN+L+ GY   G+   A
Sbjct: 197 VVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEA 256

Query: 618 KKMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMK------------ 660
            ++L+ M +E I+P  V+ ++ +S  +       G+   A+ I++ ++            
Sbjct: 257 IRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNF 316

Query: 661 --------------NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
                         +  I  +VVTW  LISG +Q     +++     M+ E++K +  T+
Sbjct: 317 YCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTL 376

Query: 707 SSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           S+L+        L+ GKE+ C C+++ F  D  +A+  +DMY+  G++  A++VF     
Sbjct: 377 STLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLA 436

Query: 767 KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKY 826
           K L  WN ++  +A  G   EA  LF+E+      P+AIT+  ++ +   +G V E  + 
Sbjct: 437 KDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEI 496

Query: 827 FDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGALLGSC 882
           F  M +   I P +  ++ M++ L + G  +EA  F+R M     +P+A      L +C
Sbjct: 497 FSQMQSS-GIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 554



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 12/220 (5%)

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P+  ++   +S   ++   RE+L    +M    ++        +LQ C     L  GK+I
Sbjct: 31  PSSASYFHRVSSLSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQI 90

Query: 726 HCLCLKNG--FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           H   LKNG  + K+ Y+ T L+  Y+K    +++  +F K   + + SW  +I      G
Sbjct: 91  HARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIG 150

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH- 842
             +EA++ F E+L+    PD      +   CK  G ++  W  F      Y +   +   
Sbjct: 151 LCEEALMGFVEMLQNEIFPDNFVVPNV---CKACGALQ--WSRFGRGVHGYVVKSGLHDC 205

Query: 843 ---YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
               S + D+ GK G LD+A      +P + +   W AL+
Sbjct: 206 VFVASSLADMYGKCGVLDDARKVFDEIPER-NVVAWNALM 244


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  369 bits (947), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 217/716 (30%), Positives = 361/716 (50%), Gaps = 72/716 (10%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            + + K+L+ C+K G F +G Q+H   +      +L + N LI MY + ++          
Sbjct: 5    QRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSR---------- 54

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
                                 VD+A S+F++M    ++ ++++W  L+ G+   G+ +  
Sbjct: 55   ---------------------VDLACSVFDRM----LERNVVSWTALMCGYLQEGNAKGS 89

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
            L LL  M   G +PN  + S  L+A   L +++ G + HG  +++G ++   VG + +DM
Sbjct: 90   LALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDM 149

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
            Y K   +  A++VF+ M  RN+V+WN++I+G+  +G    +  +  +M+ +   PD  ++
Sbjct: 150  YSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTF 209

Query: 637  NSLVSGYSIWGQSKEALVI------------IHHMKNSGIY------------------- 665
             S +      G  +    I            I ++  S I                    
Sbjct: 210  TSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRI 269

Query: 666  --PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
               N+++W++LI G  Q  N  E++  F Q+++     +   +S ++     L L++ GK
Sbjct: 270  EQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGK 329

Query: 724  EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
            ++HC  LK     D  VA  +IDMY K G  + A  +F +   + + SW  MI G+  +G
Sbjct: 330  QMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHG 389

Query: 784  NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
             G++AI LF+ +   G + D + + ALL+AC +SGL+ E  +YF  +  ++ + P IEHY
Sbjct: 390  LGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHY 449

Query: 844  SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
            +CMVD+LG+AG L EA + I  M  KP+  IW  LL +CR+HG+LE        LF+++ 
Sbjct: 450  ACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDT 509

Query: 904  CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
             N  NY +M N+ A +  W++ ER+R  +   G+K     SW++I++ +H F      HP
Sbjct: 510  DNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHP 569

Query: 964  ATGEIYFELYHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLM---K 1019
             T +I+  L  +   +K ++GY    R    D++EE K + L  H+EKLAI   L+    
Sbjct: 570  LTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGM 629

Query: 1020 TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             K    IRV KN RVC DCH   K +S +  +   +RD  RFH F +G CSC D W
Sbjct: 630  EKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 234/528 (44%), Gaps = 81/528 (15%)

Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
           L  +L+ C+K   F  G++VHA+ +  GF FD+ +   L++ YGKC  V+ A  +F  + 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRM- 65

Query: 357 DLEDDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
            LE +++ W  ++   L+    + ++ L  EM +S  K    T    L+AC  +G    G
Sbjct: 66  -LERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124

Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
            QIHG  +KS  E    V N  I MYS+  ++ +A +VF+ M   NL SWN+MI+ +T  
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184

Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
           G    +  LF +M      PD  T+                                   
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTF----------------------------------- 209

Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDL--YVGTSLMDMYVKNDCLQNAQEVFDNM 593
           +  L+A   L  ++ G + H  ++  G    +   + ++++D+Y K   L  AQ+VFD +
Sbjct: 210 TSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRI 269

Query: 594 KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE-----------------------EEIK 630
           + +N+++W++LI G+  +G  + A  +  Q+ E                       E+ K
Sbjct: 270 EQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGK 329

Query: 631 P------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                        D+   NS++  Y   G ++EA  +   M+      NVV+WT +I+G 
Sbjct: 330 QMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQ----VRNVVSWTVMITGY 385

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC-LCLKNGFIKD 737
            ++    +++  F +MQ + I+ +     +LL  C   GL++  +E    LC  +    +
Sbjct: 386 GKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPN 445

Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGN 784
                 ++D+  ++G LK A+ +      K     W  ++    ++GN
Sbjct: 446 IEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGN 493



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 226/519 (43%), Gaps = 52/519 (10%)

Query: 214 HAQMIKMG----KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
           HA  + MG     I N+D     LI  Y +      A   F     R+   W++ +  Y 
Sbjct: 27  HAAAVNMGFGFDLIMNND-----LIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYL 81

Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
              G  +  L +  E+   GV       +  LK C  L     G+++H   +K GF++  
Sbjct: 82  Q-EGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVS 140

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
            +  A ++ Y KC  +  A ++F+++    + + WN +I           ++ LF+ MQ 
Sbjct: 141 VVGNATIDMYSKCGRIGMAEQVFNKMP-FRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQG 199

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS--VCNCLISMYSRNNKL 447
                   T    L+AC  +GA   G QIH  ++      ++   + + ++ +Y++   L
Sbjct: 200 QGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYL 259

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
             A +VFD ++  NL SW+++I  +   G +  A  LF ++  S    D           
Sbjct: 260 FEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVD----------- 308

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                                   G  +S+++    +L L++ G++ H YIL+     D+
Sbjct: 309 ------------------------GFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDI 344

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
            V  S++DMY+K    + A+ +F  M+ RN+V+W  +I+GY   GL   A  + N+M+ +
Sbjct: 345 SVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLD 404

Query: 628 EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRE 686
            I+ D V++ +L+S  S  G  +E+      +  N  + PN+  +  ++    +    +E
Sbjct: 405 GIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKE 464

Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           +      M+   +KPN     +LL  C   G L+ G+E+
Sbjct: 465 AKNLIENMK---LKPNEGIWQTLLSACRVHGNLEIGREV 500


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  369 bits (947), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 207/584 (35%), Positives = 307/584 (52%), Gaps = 42/584 (7%)

Query: 530  PNGSSVSVVLQAVTELRL---LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
            PN S +++ +   +  RL   L+ G + H   L+     + +V TSL+ +Y K   L  A
Sbjct: 521  PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 580

Query: 587  QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------LVSW 636
            Q VFD M + + V W +LI+ Y   G    A  +        ++PD              
Sbjct: 581  QRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARI 640

Query: 637  NSLVSGYSIW-------------------------GQSKEALVIIHHMKNSGIYPNVVTW 671
              L +G ++W                         G+  +A  +   M++     + V W
Sbjct: 641  ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHK----DAVAW 696

Query: 672  TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
             +++ G   N + RE+L  F+ MQ E +KP+   ++  L  C  LG L  G++   +   
Sbjct: 697  GAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDW 756

Query: 732  NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
            + F+ +  + T LIDMY+K G+   A  VF++   K +  WN MI+G  + G+ K A  L
Sbjct: 757  DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFAL 816

Query: 792  FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
              ++ ++G + +  TF  LL +C ++GL+++G +YF +M+  Y+I P IEHY CMVDLL 
Sbjct: 817  VGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLS 876

Query: 852  KAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNL 911
            +AG L EA   +  MP   +A I GALLG C+IH + E AE   ++L  LEP NS NY +
Sbjct: 877  RAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVM 936

Query: 912  MMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFE 971
            + N+ +   RWED  +LR  M   GV+ V   SW++ +  VH F      HP + +IY +
Sbjct: 937  LSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKK 996

Query: 972  LYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKN 1031
            L  L  EMK +GY P T  V  D+++EEK   L+ H+EKLAI + L+ T     IRV KN
Sbjct: 997  LDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKN 1056

Query: 1032 TRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             RVCSDCHTA K +S +  REI +RD  RFH FR+G CSCND W
Sbjct: 1057 LRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 155/382 (40%), Gaps = 75/382 (19%)

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
           G+Q+H   LK    +N  V   L+S+Y++   L  A RVFD M                 
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMP---------------- 588

Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
                               P  + W  L++ +   G  +  + + R   + G RP+  +
Sbjct: 589 -------------------HPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFT 629

Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
              VL A   +  L  G        + G+   ++V T+ +D+YVK   +  A+EVFD M+
Sbjct: 630 AVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMR 689

Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------------- 632
           +++ VAW +++ GY   G    A  +   M+ E +KPD                      
Sbjct: 690 HKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ 749

Query: 633 ---LVSWN----------SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
              +V W+          +L+  Y+  G + EA V+   M+      +++ W ++I G  
Sbjct: 750 AIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKK----DIIVWNAMILGLG 805

Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
              + + +     QM++  +K N  T   LL +C   GL+Q+G+       K   I    
Sbjct: 806 MTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRI 865

Query: 740 VATG-LIDMYSKSGNLKSAREV 760
              G ++D+ S++G L+ A ++
Sbjct: 866 EHYGCMVDLLSRAGLLQEAHQL 887



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/402 (21%), Positives = 168/402 (41%), Gaps = 40/402 (9%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G ++HA  +K     + H+  +L++ Y KC  +  A ++F E+      + W  +I   +
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPH-PSTVPWTALITAYM 603

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
                  A+ + R    +  +  S T V++L ACA++     G+ +     +  +  ++ 
Sbjct: 604 DAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVF 663

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V    + +Y +  ++  A  VFD M+  +  +W +M+  Y   G+   A  LF  M    
Sbjct: 664 VATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM---- 719

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
                                          Q+ G +P+  +V+  L A T L  L  GR
Sbjct: 720 -------------------------------QAEGMKPDCYAVAGALSACTRLGALDLGR 748

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           ++   +  +    +  +GT+L+DMY K      A  VF  M+ ++I+ WN++I G    G
Sbjct: 749 QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTG 808

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTW 671
               A  ++ QME+  +K +  ++  L+   +  G  ++     H+M K   I P +  +
Sbjct: 809 HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHY 868

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             ++    +    +E+ +    M    +  N+  + +LL  C
Sbjct: 869 GCMVDLLSRAGLLQEAHQLVDDMP---MPANAVILGALLGGC 907



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 3/288 (1%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L + +  HA+ +K+    N   ++ SL+  Y + G    A + F      S   W++ + 
Sbjct: 542 LRAGEQLHARSLKLPSHTNPH-VLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALIT 600

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
            Y    G+++E + V       G+   S     +L  C ++     G  V  +  + G  
Sbjct: 601 AYMD-AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 659

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
             V +  A ++ Y KC ++  A ++F ++   +D + W  ++     N     A+ LF  
Sbjct: 660 QSVFVATAAVDLYVKCGEMAKAREVFDKMRH-KDAVAWGAMVGGYASNGHPREALDLFLA 718

Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
           MQ    K     +   L AC ++GA   G+Q    V       N  +   LI MY++   
Sbjct: 719 MQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGS 778

Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
              A  VF  M+  ++  WN+MI      G+  +A++L  +M  S ++
Sbjct: 779 TVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVK 826


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 822

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 227/735 (30%), Positives = 380/735 (51%), Gaps = 50/735 (6%)

Query: 378  ENAIKLFREMQFSSAKAISRTIVKMLQACAK-VGAF----HEGKQIHGYVLKSALESNLS 432
            ++A+ LF EM       +S   +    AC   VG +     EG +++ +V  S L+  +S
Sbjct: 101  KDALNLFDEM--PERNNVSYVTLTQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVS 158

Query: 433  VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
            +    I  +  +  ++L         D N     ++I++Y+  G VD A S+F  +    
Sbjct: 159  LDKAEICWWLHSPIVKLGY-------DSNAFVGAALINAYSVCGSVDSARSVFEGI---- 207

Query: 493  IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            +  DI+ W  ++S +  +G +++ L LL  M   GF PN  +    L+A   L    + +
Sbjct: 208  LCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAK 267

Query: 553  ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
              HG IL+   + D  VG  L+ +Y +   + +A +VF+ M   ++V W+ +I+ +C  G
Sbjct: 268  SVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNG 327

Query: 613  LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIH------HMKN 661
                A  +  +M E  + P+  + +S+++G +I      G+    LV+        ++ N
Sbjct: 328  FCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSN 387

Query: 662  SGI--------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
            + I                      NVV+W ++I G        ++L  F +  +  +  
Sbjct: 388  ALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSV 447

Query: 702  NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
               T SS L  C  L  ++ G ++H L +K    K   V+  LIDMY+K G++K A+ VF
Sbjct: 448  TEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVF 507

Query: 762  RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
             +     +ASWN +I G++ +G G++A+ +F  +  +  +P+ +TF  +L+ C N+GL++
Sbjct: 508  NEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLID 567

Query: 822  EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
            +G   F+SM  D+ I P +EHY+CMV L G++G LD+A + I  +P++P   IW A+L +
Sbjct: 568  QGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627

Query: 882  CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
                 + E+A  ++  + K+ P + A Y L+ N+ A + +W +V  +R SM E GVK   
Sbjct: 628  SMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEP 687

Query: 942  VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
              SWI+    VH FS   + HP    I   L  L  +  + GYVPD   V  D+D+EEK 
Sbjct: 688  GLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKD 747

Query: 1002 KVLLSHTEKLAIVYGLMK-TKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
            K L  H+E+LA+ YGL++   SR  I ++KN R+CSDCH+A K +S +  R++ +RD  R
Sbjct: 748  KRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNR 807

Query: 1061 FHHFREGECSCNDCW 1075
            FHHF  G CSC+D W
Sbjct: 808  FHHFHAGVCSCDDHW 822



 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/591 (22%), Positives = 254/591 (42%), Gaps = 94/591 (15%)

Query: 209 SVKSKHAQMIKMGKIWNSDDMVKS--LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           S K+ H  ++K G      D+  +  L+  Y++ G    A   F     R+   + +  +
Sbjct: 67  SAKAIHCDILKKGSCL---DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQ 123

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL----MAFWLGVEVHASLIK 322
            Y       Q+ + ++  LH +G      + T  LKL   L    + +WL    H+ ++K
Sbjct: 124 GYA-----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWL----HSPIVK 174

Query: 323 RGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
            G+D +  +  AL+N Y  C  V+SA  +F  +   +D ++W  I+   + N  +E++++
Sbjct: 175 LGYDSNAFVGAALINAYSVCGSVDSARSVFEGIL-CKDIVVWAGIVSCYVENGCFEDSLQ 233

Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
           L   M        + T    L+A   +GAFH  K +HG +LK+  E +  V   L+ +Y+
Sbjct: 234 LLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYT 293

Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
           +   +  A +VF+ M  +++  W+ MI+ +   G+ + A  +F +M    + P+  T + 
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSS 353

Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG 562
           +L                          NG ++          +    G + HG +++ G
Sbjct: 354 IL--------------------------NGCAIG---------KCSGLGEQLHGLVVKVG 378

Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
            D D+YV  +L+D+Y K + +  A ++F  + ++N+V+WN++I GY   G    A  M  
Sbjct: 379 FDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFR 438

Query: 623 QMEEEEIKPDLVSW-----------------------------------NSLVSGYSIWG 647
           +    ++    V++                                   NSL+  Y+  G
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCG 498

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
             K A  + + M+      +V +W +LISG   +   R++L+ F  M+  D KPN  T  
Sbjct: 499 DIKVAQTVFNEMET----IDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFL 554

Query: 708 SLLQTCGGLGLLQNGKE-IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
            +L  C   GL+  G++    +   +G        T ++ ++ +SG L  A
Sbjct: 555 GVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKA 605


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 237/800 (29%), Positives = 387/800 (48%), Gaps = 77/800 (9%)

Query: 313  GVEVHASLIKRGFDFDVHLKCA--LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
            G  VHA +++RG    +   CA  L+NFY K   + +A +LF  + +         +   
Sbjct: 64   GRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGY 123

Query: 371  KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             LR E +E A++LFR +Q                         EG +++ +VL + L+  
Sbjct: 124  ALRGE-FEEALELFRRLQ------------------------REGHEVNHFVLTTILK-- 156

Query: 431  LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
                  L++M +      +         D N     ++I +Y+  G V  A  +F+ +  
Sbjct: 157  -----VLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGI-- 209

Query: 491  SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
              +  D +TW  ++S +  +   +  L     M+  GF+PN   ++  L+A   L     
Sbjct: 210  --VGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALL 267

Query: 551  GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
            G+  HG  ++   D + +VG +L+DMY K   +++A  +F+ + + +++ W+ LIS Y  
Sbjct: 268  GKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQ 327

Query: 611  KGLFVNAKKMLNQMEEEEIKP-----------------------------------DLVS 635
                  A +M  +M    + P                                   +L  
Sbjct: 328  SCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFV 387

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
             N+L+  Y+     + +L I   ++++    N V+W ++I G  Q+    ++L  F +M+
Sbjct: 388  GNALMDMYAKCRNMENSLEIFSSLQDA----NEVSWNTIIVGYCQSGFAEDALSVFHEMR 443

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
               +     T SS+L+ C     +++  +IH L  K+ F  D  V   LID Y+K G ++
Sbjct: 444  AAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIR 503

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             A +VF       + SWN +I  +A++G    A+ LF  + ++  + + +TF +LL+ C 
Sbjct: 504  DALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCG 563

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            ++GLV +G   F+SM  D+ I P++EHY+C+V LLG+AG L +A  FI  +P  P   +W
Sbjct: 564  STGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVW 623

Query: 876  GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
             ALL SC +H ++     A+ ++  +EP +   Y L+ N+ A +   ++V   R SM  V
Sbjct: 624  RALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNV 683

Query: 936  GVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI 995
            GVK     SW++I   VH FS   A HP    I   L  L  +  + GYVPD   V  D+
Sbjct: 684  GVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDV 743

Query: 996  DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFL 1055
            DEEEK ++L  H+E+LA+ YGL  T    PIR++KN R C DCHT  K +S +  REI +
Sbjct: 744  DEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIV 803

Query: 1056 RDGARFHHFREGECSCNDCW 1075
            RD  RFHHF EG CSC D W
Sbjct: 804  RDINRFHHFEEGICSCGDYW 823



 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 155/629 (24%), Positives = 273/629 (43%), Gaps = 100/629 (15%)

Query: 172 TSLALPPTDTLAKQAQLS-CISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMV 230
            SLALP  D+ A    L  CI+ G              + ++ HA++++ G +   D   
Sbjct: 36  ASLALPKLDSYACARFLQRCIARGDA-----------RAGRAVHARVVQRGGVAQLDTFC 84

Query: 231 KSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKG 289
            +++ + Y + G   +A + F     R+   + + ++ Y +  GE +E LE++  L  +G
Sbjct: 85  ANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGY-ALRGEFEEALELFRRLQREG 143

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
                 +LT ILK+   + A  L   +HA   K G D +  +  AL++ Y  C  V  A 
Sbjct: 144 HEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHAR 203

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKV 409
            +F  +   +D + W  ++     N+  E A+  F +M+ +  K     +   L+A   +
Sbjct: 204 CVFDGIVG-KDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCL 262

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
            +   GK IHG  +K+  ++   V   L+ MY++   +E A  +F+ +   ++  W+ +I
Sbjct: 263 SSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLI 322

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           S Y      + A+ +F                                  LR M+S    
Sbjct: 323 SRYAQSCQNEQAFEMF----------------------------------LRMMRSF-VV 347

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
           PN  S+S VLQA   +  L+ G + H   ++ G + +L+VG +LMDMY K   ++N+ E+
Sbjct: 348 PNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEI 407

Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM------------------------- 624
           F ++++ N V+WN++I GYC  G   +A  + ++M                         
Sbjct: 408 FSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSI 467

Query: 625 ----------EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
                     E+     D +  NSL+  Y+  G  ++AL +      S +  +VV+W S+
Sbjct: 468 KHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVF----ESIVECDVVSWNSI 523

Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
           IS    +     +L+ F +M + DIK N  T  SLL  CG  GL+  G     L L N  
Sbjct: 524 ISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQG-----LWLFNSM 578

Query: 735 IKDAYVA------TGLIDMYSKSGNLKSA 757
           + D  +       T ++ +  ++G L  A
Sbjct: 579 MMDHRIKPSMEHYTCIVRLLGRAGRLTDA 607



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 227/524 (43%), Gaps = 70/524 (13%)

Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV--CNCLISMYSRNNKLELATRV 453
           S    + LQ C   G    G+ +H  V++    + L     N L++ Y++   L  A R+
Sbjct: 45  SYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRL 104

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           FD M + N  S+ +                                   L+ G+   G +
Sbjct: 105 FDGMPERNRVSFVT-----------------------------------LMQGYALRGEF 129

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
           +  L L R +Q  G   N   ++ +L+ +  +         H    + G D + +VGT+L
Sbjct: 130 EEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTAL 189

Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD- 632
           +D Y     + +A+ VFD +  ++ V W +++S Y    +   A    ++M     KP+ 
Sbjct: 190 IDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNP 249

Query: 633 ---------LVSWNSLVSGYSIWGQSKEAL----------VIIHHMKNSGI--------- 664
                     V  +S + G  I G S + L          ++  + K   I         
Sbjct: 250 FVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEM 309

Query: 665 --YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
             + +V+ W+ LIS   Q+    ++ + F++M +  + PN  ++S +LQ C  +  L+ G
Sbjct: 310 IPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELG 369

Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
           ++IH L +K G+  + +V   L+DMY+K  N++++ E+F    +    SWN +I+G+   
Sbjct: 370 EQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQS 429

Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
           G  ++A+ +FHE+         +TF+++L AC N+  ++   +    +        TI  
Sbjct: 430 GFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVC 489

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
            S ++D   K G++ +A     ++  + D   W +++ +  +HG
Sbjct: 490 NS-LIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALHG 531


>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71420-like [Glycine max]
          Length = 782

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 231/735 (31%), Positives = 359/735 (48%), Gaps = 99/735 (13%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELATRVF 454
            +T   +  ACA+      G  +H YVL     +++++ + N +I+MY +   L  A  VF
Sbjct: 91   QTYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVF 150

Query: 455  DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
            D M   N+ SW ++IS +   G V   +SLF                   SG   H    
Sbjct: 151  DQMSHRNIVSWTALISGHAQSGLVRECFSLF-------------------SGLLAH---- 187

Query: 515  NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
                         FRPN  + + +L A  E   +K G + H   L+  LD ++YV  SL+
Sbjct: 188  -------------FRPNEFAFASLLSACEE-HDIKCGMQVHAVALKISLDANVYVANSLI 233

Query: 575  DMYVKNDCL--------QNAQEVFDNMKNRNIVAWNSLISGYCFKGL------------- 613
             MY K             +A  +F +M+ RN+V+WNS+I+ +  +GL             
Sbjct: 234  TMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYC 293

Query: 614  ---------FVNAKKMLN----------------QMEEEEIKPDLVS----WNSLVSGYS 644
                      ++    LN                Q+    IK  L+S      +L+  Y+
Sbjct: 294  NGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYA 353

Query: 645  IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
              G        I H  +S +  ++V+WT+LIS      +  ++   F Q+ ++   P+  
Sbjct: 354  NLGGHISDCYRIFHDTSSQL--DIVSWTALIS-VFAERDPEQAFLLFCQLHRQSYLPDWY 410

Query: 705  TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
            T S  L+ C      Q+   IH   +K GF +D  +   L+  Y++ G+L  + +VF + 
Sbjct: 411  TFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEM 470

Query: 765  ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
                L SWN M+  +AI+G  K+A+ LF ++      PD+ TF ALL+AC + GLV+EG 
Sbjct: 471  GCHDLVSWNSMLKSYAIHGQAKDALELFQQM---NVCPDSATFVALLSACSHVGLVDEGV 527

Query: 825  KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
            K F+SMS D+ ++P ++HYSCMVDL G+AG + EA + IR MP KPD+ IW +LLGSCR 
Sbjct: 528  KLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRK 587

Query: 885  HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
            HG    A++A+ +  +LEP NS  Y  M N+ +    +     +R+ M +  V+     S
Sbjct: 588  HGETRLAKLAADKFKELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLS 647

Query: 945  WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
            W++I + VH F + G  HP  G I   L  ++ ++K++GYVP+      D + E K   L
Sbjct: 648  WVEIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQLKEMGYVPELSLALYDTEVEHKEDQL 707

Query: 1005 LSHTEKLAIVYGLMKTKSRA----PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
              H+EK+A+V+ +M   S       I+++KN R+C DCH   K  S +  +EI +RD  R
Sbjct: 708  FHHSEKMALVFAIMNEGSLPCGGNVIKIMKNIRICVDCHNFMKLASYLFQKEIVVRDSNR 767

Query: 1061 FHHFREGECSCNDCW 1075
            FH F+   CSCND W
Sbjct: 768  FHRFKYATCSCNDYW 782



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 175/393 (44%), Gaps = 56/393 (14%)

Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWN--CLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           Y  L  + +  S   K+NSS  +P+ I  N    +    T G+ +  L+LL    SL  +
Sbjct: 33  YGILRQIGLTISRARKVNSSA-EPETIATNIDAQIRALSTQGNIEEALSLLYTHSSLSLQ 91

Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNG--LDYDLYVGTSLMDMYVKNDCLQNAQ 587
              S    +  A  + + L++G   H Y+L     +  D+++   +++MY K   L  A+
Sbjct: 92  TYAS----LFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYAR 147

Query: 588 EVFDNMKNRNIVAWNSLISGYC-----------FKGLFVNAK-------KMLNQMEEEEI 629
            VFD M +RNIV+W +LISG+            F GL  + +        +L+  EE +I
Sbjct: 148 YVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSGLLAHFRPNEFAFASLLSACEEHDI 207

Query: 630 K---------------PDLVSWNSLVSGYS----IWGQSKEALVIIHHMKNSGIYPNVVT 670
           K                ++   NSL++ YS      G   +       M  S  + N+V+
Sbjct: 208 KCGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVS 267

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSL---LQTCGGLGL----LQNGK 723
           W S+I+         +++  F  M    I  +  T+ S+   L  CG   +    L+   
Sbjct: 268 WNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCF 327

Query: 724 EIHCLCLKNGFIKDAYVATGLIDMYSK-SGNLKSAREVFRKSANK-TLASWNCMIMGFAI 781
           ++HCL +K+G I +  V T LI  Y+   G++     +F  ++++  + SW  +I  FA 
Sbjct: 328 QLHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVFA- 386

Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
             + ++A LLF +L    + PD  TF+  L AC
Sbjct: 387 ERDPEQAFLLFCQLHRQSYLPDWYTFSIALKAC 419



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 115/512 (22%), Positives = 217/512 (42%), Gaps = 69/512 (13%)

Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
           DV L   ++N Y KC  +  A  +F ++S   + + W  +I    ++        LF  +
Sbjct: 126 DVFLTNHIINMYCKCGHLAYARYVFDQMSH-RNIVSWTALISGHAQSGLVRECFSLFSGL 184

Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHE---GKQIHGYVLKSALESNLSVCNCLISMYSRN 444
             +  +        +L AC +    H+   G Q+H   LK +L++N+ V N LI+MYS+ 
Sbjct: 185 -LAHFRPNEFAFASLLSACEE----HDIKCGMQVHAVALKISLDANVYVANSLITMYSKR 239

Query: 445 NKL--------ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
           +          + A  +F SM+  NL SWNSMI+ +   G  D A  LF  M  + I  D
Sbjct: 240 SGFGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFD 299

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL-----RLLKYG 551
             T   + S     G++  + T LR    L      S +   ++ VT L      L  + 
Sbjct: 300 RATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHI 359

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA-WNSLISGYCF 610
            + +          D+   T+L+ ++ + D  + A  +F  +  ++ +  W +       
Sbjct: 360 SDCYRIFHDTSSQLDIVSWTALISVFAERD-PEQAFLLFCQLHRQSYLPDWYTFSIALKA 418

Query: 611 KGLFV---NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
              FV   +A  + +Q+ ++  + D V  N+L+  Y+  G    +L +   + N     +
Sbjct: 419 CAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCG----SLALSEQVFNEMGCHD 474

Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIH 726
           +V+W S++     +   +++L+ F   QQ ++ P+S T  +LL  C  +GL+  G K  +
Sbjct: 475 LVSWNSMLKSYAIHGQAKDALELF---QQMNVCPDSATFVALLSACSHVGLVDEGVKLFN 531

Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
            +   +G +      + ++D+Y ++G +  A E+ RK   K                   
Sbjct: 532 SMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMK------------------- 572

Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSG 818
                          PD++ +++LL +C+  G
Sbjct: 573 ---------------PDSVIWSSLLGSCRKHG 589



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 112/522 (21%), Positives = 219/522 (41%), Gaps = 53/522 (10%)

Query: 205 RCLSSVKSKHAQMI-KMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           +CL    + H  ++ K   I N   +   +I  Y + G    A   F     R+   W++
Sbjct: 104 KCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTA 163

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLI 321
            +  +    G V+E   ++  L      FR        +L  C +      G++VHA  +
Sbjct: 164 LISGHAQ-SGLVRECFSLFSGLLAH---FRPNEFAFASLLSACEE-HDIKCGMQVHAVAL 218

Query: 322 KRGFDFDVHLKCALMNFYGK--------CRDVESANKLFSEVSDLEDDLLWNEIIMVKLR 373
           K   D +V++  +L+  Y K         +  + A  +F  + +  + + WN +I     
Sbjct: 219 KISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSM-EFRNLVSWNSMIAXFQL 277

Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
               + AI LF  M  +       T++ +  +  + GAF     I+ Y+ K      L++
Sbjct: 278 RGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAF---DVINTYLRKCFQLHCLTI 334

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL-GYVDVAWSLFNKMNSSR 492
            + LIS      ++E+ T               ++I SY  L G++   + +F+  +S  
Sbjct: 335 KSGLIS------EIEVVT---------------ALIKSYANLGGHISDCYRIFHDTSS-- 371

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            Q DI++W  L+S  F     +    L   +    + P+  + S+ L+A       ++  
Sbjct: 372 -QLDIVSWTALISV-FAERDPEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAM 429

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H  +++ G   D  +  +LM  Y +   L  +++VF+ M   ++V+WNS++  Y   G
Sbjct: 430 AIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHG 489

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
               AK  L   ++  + PD  ++ +L+S  S  G   E + + + M +  G+ P +  +
Sbjct: 490 ---QAKDALELFQQMNVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHY 546

Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           + ++    +     E+ +   +M    +KP+S   SSLL +C
Sbjct: 547 SCMVDLYGRAGKIFEAEELIRKM---PMKPDSVIWSSLLGSC 585



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 164/399 (41%), Gaps = 31/399 (7%)

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWL--- 312
           R+   W+S +  ++   G   + + ++  ++  G+ F    L  +     +  AF +   
Sbjct: 263 RNLVSWNSMIAXFQ-LRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINT 321

Query: 313 ----GVEVHASLIKRGFDFDVHLKCALMNFYGKCR-DVESANKLFSEVSDLEDDLLWNEI 367
                 ++H   IK G   ++ +  AL+  Y      +    ++F + S   D + W  +
Sbjct: 322 YLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTAL 381

Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
           I V    +  E A  LF ++   S      T    L+ACA          IH  V+K   
Sbjct: 382 ISVFAERDP-EQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGF 440

Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
           + +  +CN L+  Y+R   L L+ +VF+ M  H+L SWNSM+ SY   G    A  LF +
Sbjct: 441 QEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQ 500

Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELR 546
           MN   + PD  T+  LLS     G     + L   M    G  P     S ++       
Sbjct: 501 MN---VCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDL----- 552

Query: 547 LLKYGR-----ESHGYILRNGLDYDLYVGTSLMDMYVKND---CLQNAQEVFDNMKNRNI 598
              YGR     E+   I +  +  D  + +SL+    K+      + A + F  ++  N 
Sbjct: 553 ---YGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNS 609

Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDL-VSW 636
           + +  + + Y   G F  A  + N+M + +++ +  +SW
Sbjct: 610 LGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSW 648


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  369 bits (946), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 210/621 (33%), Positives = 321/621 (51%), Gaps = 46/621 (7%)

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY-GRE 553
            P ++++   +SG   H      L+    M  LG RPN  +     +A          G +
Sbjct: 82   PTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQ 141

Query: 554  SHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             H   LR G L  D +V  + +DMY K  CL  A+ +FD M NRN+VAWN++++     G
Sbjct: 142  LHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDG 201

Query: 613  -------------------------LFVNAKKMLNQMEEEE----------IKPDLVSWN 637
                                      F NA   +  +   E             D+   N
Sbjct: 202  RPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSN 261

Query: 638  SLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE 697
            S+V  Y       +A  +   M   G+  NV +W S++    QN    E+   ++  ++ 
Sbjct: 262  SVVDFYGKCRCVGKARAVFDGM---GVRNNV-SWCSMVVAYAQNGAEEEAFFVYLGARRA 317

Query: 698  DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA 757
              +P    +SS+L TC GL  L  G+ +H + +++    + +VA+ L+DMY K G ++ A
Sbjct: 318  GEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDA 377

Query: 758  REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL---ETGFQPDAITFTALLAAC 814
             +VF +   + L +WN MI G+A  G+   A+ +F +++   ET   P+ IT   +L AC
Sbjct: 378  EQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETA--PNYITLVNVLTAC 435

Query: 815  KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATI 874
               GL +EG++ F +M   + I P IEHY+C+VDLL +AG  + A+  I+ MP +P  ++
Sbjct: 436  SRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISV 495

Query: 875  WGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDE 934
            WGALLG C++HG  E   IA+ +LF+L+P +S N+ L+ N+LA + RW +   +R  M  
Sbjct: 496  WGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKN 555

Query: 935  VGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD 994
            VG+K     SWI    +VHVF A+   H    EI   L  L  +M+  GY+PDT+    D
Sbjct: 556  VGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYD 615

Query: 995  IDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIF 1054
            ++EEEK   +  H+EKLA+ +GL+      PIR++KN R+C DCH A K++S + GREI 
Sbjct: 616  LEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREII 675

Query: 1055 LRDGARFHHFREGECSCNDCW 1075
            +RD   FHHF+  ECSC D W
Sbjct: 676  VRDNNMFHHFKNYECSCKDYW 696



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 182/414 (43%), Gaps = 42/414 (10%)

Query: 313 GVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           G ++HA  ++ G+   D  + CA ++ Y K   +  A +LF E+ +  + + WN ++   
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPN-RNVVAWNAVMTNA 197

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           + + +    ++ +  ++ +       ++     ACA +     G+Q +G+V K     ++
Sbjct: 198 VLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDV 257

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           SV N ++  Y +   +  A  VFD M   N  SW SM+ +Y                   
Sbjct: 258 SVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYA------------------ 299

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
                             +G+ +    +  G +  G  P    VS VL     L  L  G
Sbjct: 300 -----------------QNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLG 342

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           R  H   +R+ +D +++V ++L+DMY K   +++A++VF  M  RN+V WN++I GY   
Sbjct: 343 RALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHI 402

Query: 612 GLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVV 669
           G   NA  + ++M   +E  P+ ++  ++++  S  G +KE   +   MK   GI P + 
Sbjct: 403 GDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIE 462

Query: 670 TWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
            +  ++    +      + K    +Q   ++P+ +   +LL  C   G  + G+
Sbjct: 463 HYACVVDLLCRAGMEERAYKI---IQGMPMRPSISVWGALLGGCKMHGKTELGR 513



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/470 (21%), Positives = 200/470 (42%), Gaps = 47/470 (10%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
           HA  ++ G + +   +  + +  Y + G    A + F    +R+   W++ + +     G
Sbjct: 143 HALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTN-AVLDG 201

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
              E +E +  L G G +     +      C  +    LG + +  + K GF  DV +  
Sbjct: 202 RPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSN 261

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           ++++FYGKCR V  A  +F  +  + +++ W  +++   +N   E A  ++   + +  +
Sbjct: 262 SVVDFYGKCRCVGKARAVFDGMG-VRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEE 320

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
                +  +L  CA +     G+ +H   ++S ++SN+ V + L+ MY +   +E A +V
Sbjct: 321 PTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQV 380

Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
           F  M   NL +WN+MI  Y  +G    A S+F+KM               + G  T  +Y
Sbjct: 381 FFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKM---------------IMGQETAPNY 425

Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
             ++ +L      G    G  +          + +K+         R G++  +     +
Sbjct: 426 ITLVNVLTACSRGGLTKEGYEL---------FQTMKW---------RFGIEPRIEHYACV 467

Query: 574 MDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISGYCFKG---LFVNAKKMLNQMEEEEI 629
           +D+  +    + A ++   M  R +I  W +L+ G    G   L   A + L +++ ++ 
Sbjct: 468 VDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDS 527

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV----VTWTSLI 675
              ++  N L S     G+  EA  +   MKN GI  +     +TW +++
Sbjct: 528 GNHVLLSNMLASA----GRWAEATDVRKEMKNVGIKKDPGRSWITWKNVV 573



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/422 (19%), Positives = 163/422 (38%), Gaps = 78/422 (18%)

Query: 415 GKQIHGYVLKSALESNLSVCNCL-ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
           G Q+H   L+     + +  +C  + MY +   L LA R+FD M + N            
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRN------------ 186

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                                  ++ WN +++     G     +    G++  G  PN  
Sbjct: 187 -----------------------VVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVV 223

Query: 534 SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
           SV     A   +  L  G + +G++ + G   D+ V  S++D Y K  C+  A+ VFD M
Sbjct: 224 SVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGM 283

Query: 594 KNRNIVAWNSLISGYCFKG-------LFVNAKKMLNQMEE-------------------- 626
             RN V+W S++  Y   G       +++ A++   +  +                    
Sbjct: 284 GVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGR 343

Query: 627 --------EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGS 678
                     I  ++   ++LV  Y   G  ++A  +   M       N+VTW ++I G 
Sbjct: 344 ALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQR----NLVTWNAMIGGY 399

Query: 679 LQNENYRESLKFFIQM-QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIK 736
               +   +L  F +M   ++  PN  T+ ++L  C   GL + G E+   +  + G   
Sbjct: 400 AHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEP 459

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAILLFHEL 795
                  ++D+  ++G  + A ++ +    + +++ W  ++ G  ++G  +   +   +L
Sbjct: 460 RIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKL 519

Query: 796 LE 797
            E
Sbjct: 520 FE 521


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  369 bits (946), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 220/723 (30%), Positives = 345/723 (47%), Gaps = 81/723 (11%)

Query: 397  RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
            R I  +L+A A+  +   G Q+H  ++K    S+  + N LI MY++  KL +A  VFD 
Sbjct: 201  RMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDG 260

Query: 457  MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
            M +                                    ++++W  L+ G   HG  +  
Sbjct: 261  MPER-----------------------------------NVVSWTALMVGFLHHGEAREC 285

Query: 517  LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
            L L   M+  G  PN  ++S  L+A       + G + HG  +R G +    V  SL+ M
Sbjct: 286  LRLFGEMRGSGTSPNEFTLSATLKACGGG--TRAGVQIHGVCVRTGFEGHDVVANSLVVM 343

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVS 635
            Y K     +A+ VFD + +RN+  WNS+ISGY   G   ++  +  +M+   + +PD  +
Sbjct: 344  YSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFT 403

Query: 636  WNSLVSGYSIWGQSKEALVIIHHMKNSGIYP----------------------------- 666
            + SL+   S  G ++E   +   M   G+ P                             
Sbjct: 404  FASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDG 463

Query: 667  ----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
                N + WT++I G  Q    +E++  F +     ++ +   +SS++       L++ G
Sbjct: 464  LERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQG 523

Query: 723  KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
            K++HC   K     D  VA  L+DMY K G    A   FR+   + + SW  MI G   +
Sbjct: 524  KQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKH 583

Query: 783  GNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH 842
            G+G+EAI LF E+   G + D + + ALL+AC +SGLV+E  +YF  +  D  + P  EH
Sbjct: 584  GHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEH 643

Query: 843  YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            Y+CMVDLLG+AG L EA + I +MP +P   +W  LL +CR+H  +         L  ++
Sbjct: 644  YACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVD 703

Query: 903  PCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG-AP 961
              N  NY ++ N+LA +  W + + +R +M   G++     SW ++D+ VH F   G   
Sbjct: 704  GDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDA 763

Query: 962  HPATGEIYFELYHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKT 1020
            HP  G+I   L  + + M+ +LGY  D RC   D+DEE + + L  H+E+LA+   L++ 
Sbjct: 764  HPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRD 823

Query: 1021 KSRAP--------IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
             +           +RV KN RVC DCH   K +S V  R + +RD  RFH F+ G CSC 
Sbjct: 824  GTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCR 883

Query: 1073 DCW 1075
            D W
Sbjct: 884  DYW 886



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 219/522 (41%), Gaps = 78/522 (14%)

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
           R R++  +L+   +  +   GV++HA+L+K GF  D  L   L++ Y KC  +  A ++F
Sbjct: 199 RRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVF 258

Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
             + +  + + W  +++  L + +    ++LF EM+ S       T+   L+AC   G  
Sbjct: 259 DGMPE-RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGT 315

Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
             G QIHG  +++  E +  V N L+ MYS+      A RVFD +   NL++WNSMIS Y
Sbjct: 316 RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGY 375

Query: 473 TGLGYVDVAWSLFNKMNSSRI-QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
              G    +  +F +M      QPD  T+  LL      G+ +    +   M   G  P 
Sbjct: 376 AHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPA 435

Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
            +++                                 +  +L+D+YVK   L  A +VFD
Sbjct: 436 SNAI---------------------------------LAGALLDVYVKCHRLPVAMQVFD 462

Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------------LVSW 636
            ++ RN + W ++I G+  +G    A  +  +     ++ D               LV  
Sbjct: 463 GLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQ 522

Query: 637 --------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
                               NSLV  Y   G + EA      M       NVV+WT++I+
Sbjct: 523 GKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPAR----NVVSWTAMIN 578

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC-LCLKNGFI 735
           G  ++ + RE++  F +MQ E ++ +     +LL  C   GL+   +     +C      
Sbjct: 579 GVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMR 638

Query: 736 KDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMI 776
             A     ++D+  ++G L+ A+E +       T+  W  ++
Sbjct: 639 PKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLL 680



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 218/505 (43%), Gaps = 49/505 (9%)

Query: 214 HAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA ++K+G  + SD M+ + LI  Y + G    A + F     R+   W++ +  +   G
Sbjct: 223 HAALMKLG--FGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHG 280

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
            E +E L ++GE+ G G       L+  LK C        GV++H   ++ GF+    + 
Sbjct: 281 -EARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVA 337

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            +L+  Y K R    A ++F +V    +   WN +I       +  +++ +FREMQ    
Sbjct: 338 NSLVVMYSKGRWTGDARRVF-DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHD 396

Query: 393 KAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALE--SNLSVCNCLISMYSRNNKLEL 449
           +     T   +L+AC+ +GA  EG Q+H  +    +   SN  +   L+ +Y + ++L +
Sbjct: 397 EQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPV 456

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A +VFD ++  N   W ++I  +   G V  A  LF +  SS                  
Sbjct: 457 AMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSS------------------ 498

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                            G R +G  +S V+    +  L++ G++ H Y  +     D+ V
Sbjct: 499 -----------------GVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSV 541

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             SL+DMY+K      A   F  M  RN+V+W ++I+G    G    A  +  +M+ E +
Sbjct: 542 ANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGV 601

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNENYRESL 688
           + D V++ +L+S  S  G   E       + ++  + P    +  ++    +    RE+ 
Sbjct: 602 EADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAK 661

Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
           +  + M  E   P      +LL  C
Sbjct: 662 ELILSMPME---PTVGVWQTLLSAC 683


>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
 gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
          Length = 595

 Score =  368 bits (945), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 219/665 (32%), Positives = 330/665 (49%), Gaps = 79/665 (11%)

Query: 416  KQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL--ATRVFDSMKDHNLSSWNSMISSYT 473
            KQI   ++K+A+ +   +    +++ +  +  +L  A RVF+ +   N   WN++I +Y+
Sbjct: 5    KQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIRAYS 64

Query: 474  GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGS 533
                           NS   +   +++  +LS    H SY                    
Sbjct: 65   ---------------NSDEPELAFLSYQQMLSSSVPHNSY-------------------- 89

Query: 534  SVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM 593
            +   +L+A   L  +    + HG +++ G   D++   +L+ +Y     +  A+++FDN+
Sbjct: 90   TFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNI 149

Query: 594  KNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEAL 653
              R                                   D VSWN ++ GY   G  K A 
Sbjct: 150  PER-----------------------------------DAVSWNIMIDGYIKSGDVKTAY 174

Query: 654  VIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
             +   M       NVV+WTSLISG ++     E+L    +MQ    + +   ++SLL  C
Sbjct: 175  GVFLDMP----LKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTAC 230

Query: 714  GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK--SANKTLAS 771
              LG L  G+ +H   L NG   D  +   L++MY K G+++ A  VF K     K +  
Sbjct: 231  ANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYI 290

Query: 772  WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMS 831
            W  MI GFAI+G G EA+  F+ +   G +P++ITFTA+L AC   GLVEEG + F SM 
Sbjct: 291  WTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMK 350

Query: 832  TDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
              YN+ P+IEHY CMVDLLG++G LDEA + I+ MP KP A IWGALL +C IH      
Sbjct: 351  CFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLG 410

Query: 892  EIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQI 951
                  L +++  +S  Y  +  +LA   +W++   +R  M  +GV      S + ++ I
Sbjct: 411  SQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGI 470

Query: 952  VHVFSAEGAPHPATGEIYFELYHLVSEMKK-LGYVPDTRCVYQDIDEEEKGKVLLSHTEK 1010
            VH F A    HP   +I  +L  +   +++  GY P T+ +  D++ EEK   +  H+EK
Sbjct: 471  VHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDLENEEKETAMAQHSEK 530

Query: 1011 LAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
            LAI +GL+ TK    IRVIKN R+C DCHT AK +S +  REI +RD  RFHHFR+G CS
Sbjct: 531  LAIAFGLINTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIMRDRVRFHHFRDGSCS 590

Query: 1071 CNDCW 1075
            C D W
Sbjct: 591  CKDYW 595



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 190/373 (50%), Gaps = 11/373 (2%)

Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
           D+  A ++F+ ++   +  +WN II     +++ E A   +++M  SS    S T   +L
Sbjct: 37  DLLYAQRVFNGITS-PNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLL 95

Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
           +AC  + A  E  Q+HG V+K    S++   N L+ +Y+   ++  A ++FD++ + +  
Sbjct: 96  RACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAV 155

Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
           SWN MI  Y   G V  A+ +F  M       ++++W  L+SG    G     L+L   M
Sbjct: 156 SWNIMIDGYIKSGDVKTAYGVFLDMPLK----NVVSWTSLISGLVEAGQSVEALSLCYEM 211

Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
           Q+ GF  +G +++ +L A   L  L  GR  H Y+L NG+D D  +G +L++MYVK   +
Sbjct: 212 QNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDM 271

Query: 584 QNAQEVFDNMK--NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
           + A  VF  +K   +++  W ++I G+   G  V A +  N+M  E I+P+ +++ +++ 
Sbjct: 272 EEALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLR 331

Query: 642 GYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
             S  G  +E   +   MK    + P++  +  ++    ++    E+ +   +M    +K
Sbjct: 332 ACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMP---MK 388

Query: 701 PNSTTMSSLLQTC 713
           P++    +LL+ C
Sbjct: 389 PSAVIWGALLKAC 401



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 149/354 (42%), Gaps = 40/354 (11%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIF-HYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
           +  +K   AQMIK   I       K L        GD   A + F    S +   W++ +
Sbjct: 1   MKQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAII 60

Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
             Y S   E +     + ++    V   S     +L+ C  L+A    ++VH  +IK GF
Sbjct: 61  RAY-SNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGF 119

Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
             DV    AL++ Y  C ++  A +LF  + +  D + WN +I   +++   + A  +F 
Sbjct: 120 GSDVFALNALLHVYALCGEIHCARQLFDNIPE-RDAVSWNIMIDGYIKSGDVKTAYGVFL 178

Query: 386 EMQF-----------------SSAKAISR--------------TIVKMLQACAKVGAFHE 414
           +M                    S +A+S                I  +L ACA +GA  +
Sbjct: 179 DMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQ 238

Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH--NLSSWNSMISSY 472
           G+ +H YVL + ++ +  +   L++MY +   +E A  VF  +K +  ++  W +MI  +
Sbjct: 239 GRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGF 298

Query: 473 T--GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
              G G   + W  FN+M    I+P+ IT+  +L      G  +    L + M+
Sbjct: 299 AIHGRGVEALEW--FNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMK 350



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 37/303 (12%)

Query: 619 KMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA--LVIIHHMKNSGIYPNVVTWTSLIS 676
           K L Q++ + IK  +++   L + +     S     L+    + N    PN   W ++I 
Sbjct: 2   KQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIR 61

Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
               ++    +   + QM    +  NS T   LL+ C  L  +    ++H L +K GF  
Sbjct: 62  AYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGS 121

Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK---------- 786
           D +    L+ +Y+  G +  AR++F     +   SWN MI G+   G+ K          
Sbjct: 122 DVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMP 181

Query: 787 ---------------------EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-W 824
                                EA+ L +E+   GF+ D +   +LL AC N G +++G W
Sbjct: 182 LKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRW 241

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD-FIRTMPFKPDATIWGALLGSCR 883
            +F  ++   ++   I     +V++  K G ++EA   F +    + D  IW A++    
Sbjct: 242 LHFYVLNNGVDVDRVIG--CALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFA 299

Query: 884 IHG 886
           IHG
Sbjct: 300 IHG 302



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 5/228 (2%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
           +I  Y++ GD  +A   F     ++   W+S +      G  V E L +  E+   G   
Sbjct: 160 MIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSV-EALSLCYEMQNAGFEL 218

Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
               +  +L  C  L A   G  +H  ++  G D D  + CAL+N Y KC D+E A  +F
Sbjct: 219 DGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVF 278

Query: 353 SEVSDLEDDL-LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
            ++   + D+ +W  +I     + +   A++ F  M+    +  S T   +L+AC+  G 
Sbjct: 279 GKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGL 338

Query: 412 FHEGKQIHGYVLKSALESNLSV--CNCLISMYSRNNKLELATRVFDSM 457
             EGK++    +K     N S+    C++ +  R+ +L+ A  +   M
Sbjct: 339 VEEGKELFKS-MKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKM 385


>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
 gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score =  368 bits (945), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 284/483 (58%), Gaps = 6/483 (1%)

Query: 595  NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALV 654
             RN V + +++SG+   G     +++ +++    ++ D++   +LV+ Y      +EA  
Sbjct: 7    ERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARA 66

Query: 655  IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM--QQEDIKPNSTTMSSLLQT 712
                +      PNVV+W+++++   QN + R +L+ + +M   ++ + PN  T  +LL  
Sbjct: 67   AFEKISR----PNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDA 122

Query: 713  CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
            C  LG L  G++IH    + GF  D  V   L++ Y + G+L  A+ VF     + + SW
Sbjct: 123  CSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISW 182

Query: 773  NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMST 832
            + MI  FA  G   EA+ L+H +L  G  PD I F ++L AC NSG+VE    +F S+  
Sbjct: 183  SSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVG 242

Query: 833  DYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAE 892
            D  + PT+EHY+CMVD+LG+AG L +A D +R MPF P   ++  +L +C+++  +E  E
Sbjct: 243  DTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGE 302

Query: 893  IASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIV 952
             A+  +F+L+P NS+ Y  + N+ + + R +D  R+R  M+E G+K     SWI++   V
Sbjct: 303  AAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRV 362

Query: 953  HVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
            H F A    HP   EIY E+  L  +MK+ GY  DT+ V QD++E+EK  +L  H+EKLA
Sbjct: 363  HEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLA 422

Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
            I +GL+ T   AP+R++KN RVCSDCH A K +S V GREI +RD  RFHHF +G CSCN
Sbjct: 423  IAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCN 482

Query: 1073 DCW 1075
            D W
Sbjct: 483  DYW 485



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 111/195 (56%), Gaps = 5/195 (2%)

Query: 313 GVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKL 372
           G  VH+ +   G + DV +  AL+N YGKC+ VE A   F ++S   + + W+ ++    
Sbjct: 29  GRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKISR-PNVVSWSAMLAAYA 87

Query: 373 RNEKWENAIKLFREMQFSSAKAISR---TIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
           +N     A++L+REM  S+ K ++    T + +L AC+ +GA  EG++IH  V +   ++
Sbjct: 88  QNGHARMALELYREMG-SARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDT 146

Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
           +L VCN L++ Y R   L  A  VFD M+  ++ SW+SMIS++   G VD A  L+++M 
Sbjct: 147 DLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRML 206

Query: 490 SSRIQPDIITWNCLL 504
           S    PD I +  +L
Sbjct: 207 SEGTLPDDIIFISVL 221



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 33/243 (13%)

Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
           T V +L      G+  EG+++H  V  + LE ++ V   L++MY +   +E A   F+ +
Sbjct: 12  TYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKI 71

Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
              N+ SW++M+++Y   G+  +A  L+ +M S+R                         
Sbjct: 72  SRPNVVSWSAMLAAYAQNGHARMALELYREMGSAR------------------------- 106

Query: 518 TLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMY 577
                    G  PN  +   +L A + L  L  GR+ H  +   G D DL V  +L++ Y
Sbjct: 107 --------KGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFY 158

Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWN 637
            +   L +A+ VFD M+ R++++W+S+IS +  +G    A ++ ++M  E   PD + + 
Sbjct: 159 GRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFI 218

Query: 638 SLV 640
           S++
Sbjct: 219 SVL 221



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 139/308 (45%), Gaps = 14/308 (4%)

Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
           M+  G   N  +   VL   T    L+ GR  H  +   GL+ D+ VGT+L++MY K   
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM--EEEEIKPDLVSWNSLV 640
           ++ A+  F+ +   N+V+W+++++ Y   G    A ++  +M    + + P+ V++ +L+
Sbjct: 61  VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120

Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
              S  G   E   I   +   G   ++V   +L++   +  +  ++   F  M++ D+ 
Sbjct: 121 DACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVI 180

Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
             S+ +S+  Q     G +    E++   L  G + D  +   ++   S SG ++++ + 
Sbjct: 181 SWSSMISAFAQR----GRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDF 236

Query: 761 FRK-----SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
           FR          TL  + CM+      G  ++A  L   +    F P  + +  +L+ACK
Sbjct: 237 FRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLM---PFHPGPLLYMTMLSACK 293

Query: 816 NSGLVEEG 823
               VE G
Sbjct: 294 LYTDVERG 301



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 39/273 (14%)

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M+   ++ N  T  ++L      G L+ G+ +H      G   D  V T L++MY K  +
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL--LETGFQPDAITFTALL 811
           ++ AR  F K +   + SW+ M+  +A  G+ + A+ L+ E+     G  P+ +TF  LL
Sbjct: 61  VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120

Query: 812 AACKNSGLVEEGWKYFDSMS-----TDYNIIPTIEHY----------------------- 843
            AC   G + EG K   +++     TD  +   + ++                       
Sbjct: 121 DACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVI 180

Query: 844 --SCMVDLLGKAGYLDEAWDFIRTMPFK---PDATIWGALLGSCRIHGHLEYAEIASRRL 898
             S M+    + G +DEA +    M  +   PD  I+ ++L +C   G +E +    R +
Sbjct: 181 SWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSI 240

Query: 899 F---KLEPCNSANYNLMMNLLAMSNRWEDVERL 928
               ++EP    +Y  M+++L  + +  D E L
Sbjct: 241 VGDTQVEP-TLEHYACMVDVLGRAGKLRDAEDL 272



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 6/218 (2%)

Query: 247 AKAFFLYFSR-SYADWSSFLEDYESFGGEVQELLEVWGELHG--KGVIFRSRILTIILKL 303
           A+A F   SR +   WS+ L  Y    G  +  LE++ E+    KG+         +L  
Sbjct: 64  ARAAFEKISRPNVVSWSAMLAAYAQ-NGHARMALELYREMGSARKGMAPNRVTFITLLDA 122

Query: 304 CTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
           C+ L A   G ++HA++ +RGFD D+ +  AL+NFYG+C  +  A  +F  +    D + 
Sbjct: 123 CSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRR-RDVIS 181

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH-EGKQIHGYV 422
           W+ +I    +  + + A++L+  M            + +L AC+  G     G      V
Sbjct: 182 WSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIV 241

Query: 423 LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
             + +E  L    C++ +  R  KL  A  +   M  H
Sbjct: 242 GDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFH 279


>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
 gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
          Length = 698

 Score =  368 bits (945), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 224/746 (30%), Positives = 379/746 (50%), Gaps = 56/746 (7%)

Query: 338  FYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
             Y  C  +E A  +F  +  L ++  W  II   +   K + A+ L+R +  SS +  + 
Sbjct: 1    MYRDCGRLEDARAVFDSMP-LRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQAD 59

Query: 398  TIV--KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
              +   +L ACA++    +G +IH  ++K  ++ ++ + N L++MY++  +++ A +VFD
Sbjct: 60   AFIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFD 119

Query: 456  SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
             +   ++ SWN+M+S+    G+++VA  ++ +M    +  D++ W+ ++S     G  + 
Sbjct: 120  RITHRDVVSWNAMVSANAEAGHLEVALKIYQEM----VSADVLCWSTMISAEAMAGHDRE 175

Query: 516  VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
             L L R M  L  RPN S+++ VL A T L  L  G       +++GLD D  VGT+L++
Sbjct: 176  ALELYREM-ILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVN 234

Query: 576  MYVK-NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLV 634
            +Y +  D +   + +FD+MK+R +V                                   
Sbjct: 235  LYARFGDVIAAREVLFDSMKDRTVV----------------------------------- 259

Query: 635  SWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQM 694
            SWN++V+ ++   +  EA  +   M +     +V++W ++I+G  QN   +++L+ F +M
Sbjct: 260  SWNAMVTAFAQNARVDEAEKLFREMPDK----SVISWNAMIAGFGQNGRPKQALELFRRM 315

Query: 695  QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
              E ++P+  T  S+L  C  L     G+ I C  +     KD  VA  + +MY K G  
Sbjct: 316  DLEGLQPSRMTYCSVLDACANLTASSLGRFI-CDGMDEALAKDISVANSICNMYGKCGLP 374

Query: 755  KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAAC 814
            + AR+ F +   + + SW  +I  ++  G   EA+ +F  +++ G +P+ IT    L+AC
Sbjct: 375  ELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRIMVQAGVEPNGITLINTLSAC 434

Query: 815  KNSGLVEEGWKYFDSMSTD--YNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
             +  L +EG   F S+ +   Y +     H+ C +DLLG+AGYL +A   I  MPFK  A
Sbjct: 435  SHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGYLKDAETLITKMPFKAGA 494

Query: 873  TIWGALLGSCRIHGHLEYAEIASRRLFKLEPC---NSANYNLMMNLLAMSNRWEDVERLR 929
              W +LL +CR    L+ A   +  LF+L+     + A Y ++ N+ A +       +LR
Sbjct: 495  VAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPYVMLSNIYASAGDRAAEMKLR 554

Query: 930  HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
              +     K +   S I I    + F +    HP   + Y EL  L  +MK+ GYVPDTR
Sbjct: 555  DQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNELRRLFQKMKEAGYVPDTR 614

Query: 990  CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
                + +E E+   L  H+EKLA+ +G++ T   A + ++KN RVCSDCH   K++S   
Sbjct: 615  IAEMEEEETEQS--LSYHSEKLALAFGVLNTPPEASLCIVKNLRVCSDCHNVIKFLSKHL 672

Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
             R+I +RD  RFHHF  G CSC DCW
Sbjct: 673  NRKIAVRDATRFHHFENGFCSCRDCW 698



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 239/565 (42%), Gaps = 68/565 (12%)

Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVW-------GELHGKG 289
           Y + G    A   F     R+   W+  +  Y   G E QE L ++        E+    
Sbjct: 2   YRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKE-QEALCLYRTLVRSSTEIQADA 60

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
            IF S     +L  C +L     G+E+H  ++KRG   DV L+ AL+  Y KC  ++ A 
Sbjct: 61  FIFSS-----VLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAK 115

Query: 350 KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM---------QFSSAKAI----- 395
           ++F  ++   D + WN ++         E A+K+++EM            SA+A+     
Sbjct: 116 QVFDRITH-RDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDR 174

Query: 396 ----------------SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLIS 439
                           + T+  +L AC ++G    G  +    ++S L+ +  V   L++
Sbjct: 175 EALELYREMILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVN 234

Query: 440 MYSRNNKLELATRV-FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD-- 496
           +Y+R   +  A  V FDSMKD  + SWN+M++++     VD A  LF +M      PD  
Sbjct: 235 LYARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREM------PDKS 288

Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
           +I+WN +++G   +G  +  L L R M   G +P+  +   VL A   L     GR    
Sbjct: 289 VISWNAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGR---- 344

Query: 557 YILRNGLD----YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             + +G+D     D+ V  S+ +MY K    + A++ F  M  R++V+W ++I+ Y   G
Sbjct: 345 -FICDGMDEALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNG 403

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
               A  +   M +  ++P+ ++  + +S  S      E   I   + +   Y      +
Sbjct: 404 YSSEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANES 463

Query: 673 SLISGS--LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI--HCL 728
             +     L    Y +  +  I   +   K  +   +SLL  C     L+    +  H  
Sbjct: 464 HFLCAIDLLGRAGYLKDAETLI--TKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANHLF 521

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGN 753
            L    IKD      L ++Y+ +G+
Sbjct: 522 ELDESSIKDPAPYVMLSNIYASAGD 546


>gi|218193953|gb|EEC76380.1| hypothetical protein OsI_13992 [Oryza sativa Indica Group]
          Length = 822

 Score =  368 bits (945), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 228/720 (31%), Positives = 366/720 (50%), Gaps = 54/720 (7%)

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALES---NLSVCNCLISMYSRNNKLELATRVFD 455
            I ++LQACA       G+ +H   ++        ++ V N ++ MY++   L  A +VFD
Sbjct: 114  ITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLGWARKVFD 173

Query: 456  SMKDHNLSSWNSMI-----------------------------------SSYTGLGYVDV 480
             M   +L +WNSMI                                   SSY   G +DV
Sbjct: 174  KMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDV 233

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            A  L  +M  S + PD++TW  L+SG          L     M+  G  PNG S++  + 
Sbjct: 234  AMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAIS 293

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
            A   L+LL   +E H + ++ G   ++  G SL+DMY K   +  A  +F  + +++I +
Sbjct: 294  ACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGIPDKDIFS 353

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
            WNS+ISGY   G    A ++  +ME   ++ ++++WN+++SGY   G  + A  +   M+
Sbjct: 354  WNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMME 413

Query: 661  NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
            + G+  +  TW  LI+GS+ N  Y  +++ F QMQ    +P+  T+ S++     L    
Sbjct: 414  SHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPAFTNLVASW 473

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
              +EIH     +    D  +A  LI+ YSKSGNL SA  VF   +++ + SWNC+I+   
Sbjct: 474  KVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSRNIISWNCIILAHV 533

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
            ++G+  EA+ LF ++ + G  PD  T   ++ A   +G V EG + F +M+ DYNI P +
Sbjct: 534  LHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPEL 593

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            +HY+ MVDLLG++G L EA++ I  MP  P++T+W   L +  +HG++  A +A+R L  
Sbjct: 594  DHYAAMVDLLGRSGRLKEAYELIDEMPLIPNSTVWDTFLTAAVMHGNVRLAHLAARELSA 653

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDV-ERLR----HSMDEVGVKSVLVWSWIQIDQIVHVF 955
            ++P +     L  +L  ++ +  DV E +      ++DEV   S      I+I   V+VF
Sbjct: 654  IDPGDPRVQRLGSSLQDLTGKTVDVPEEMTPNKGRNLDEVESCS------IEIRNKVYVF 707

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
            S     +     +   +  L S M K+G+      +     EEEK +V+  H EKLAI +
Sbjct: 708  S-----NGDNVGLEDTVAELKSMMFKMGHSMLDIGIGTLDVEEEKEEVVGVHCEKLAIAF 762

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL  +     IR+IK  R+C+ CHT AK +S   GR I ++D    H F +G+CSC D W
Sbjct: 763  GLSNSPQFKNIRIIKTARMCNHCHTFAKLVSEKYGRHILIKDPKCLHKFEDGKCSCEDYW 822



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 256/527 (48%), Gaps = 28/527 (5%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +I+ ++  G +  A  +F+ M     + D++ W+ ++  +   G Y +VL L   M   G
Sbjct: 51  LITVHSCAGRLGDAREVFDGMG----RRDLLAWSAMIGAYAIRGMYSDVLALAVTMVEEG 106

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL---DYDLYVGTSLMDMYVKNDCLQ 584
             P+   ++ +LQA      L+ GR  H   +R G      D+ VG S++ MY K   L 
Sbjct: 107 VLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLG 166

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            A++VFD M  R++  WNS+I GYC    +  A+ +L+ M +E  +P +V+WN+L+S Y+
Sbjct: 167 WARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYA 226

Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            +G    A+ ++  M+ SG+ P+VVTWTSL+SG +  +   E+L+ FI+M+   ++PN  
Sbjct: 227 RFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGM 286

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           +++  +  C  L LL   KE+H   +K G + +      L+DMY+K G + +A  +F   
Sbjct: 287 SIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGI 346

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
            +K + SWN MI G+A  G   +A  LF ++   G + + IT+  +++    +G  E  +
Sbjct: 347 PDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAF 406

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF---KPD-ATIWGALLG 880
           + F  M + + +      ++ ++      GY D A    R M     +PD  TI   +  
Sbjct: 407 ELFQMMES-HGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPA 465

Query: 881 SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
              +    +  EI +         +    N ++N  + S        +    D    +++
Sbjct: 466 FTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAV---FDMHSSRNI 522

Query: 941 LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
           + W+ I +  ++H     G+P+        E   L  +MK+ G VPD
Sbjct: 523 ISWNCIILAHVLH-----GSPN--------EALDLFCQMKQEGVVPD 556



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 195/415 (46%), Gaps = 42/415 (10%)

Query: 335 LMNFYGKCRDVESANKLFSEVSD---LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
           L++ Y +  D++ A +L  ++ +     D + W  ++   +  ++ + A++ F  M+ + 
Sbjct: 221 LISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAG 280

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +    +I   + ACA +   ++ K++H + +K    +N+   N L+ MY++  ++  A 
Sbjct: 281 VEPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAW 340

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           R+F  + D ++ SWNSMIS Y   GY   A+ LF KM +  ++ ++ITWN ++SG+  +G
Sbjct: 341 RIFSGIPDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNG 400

Query: 512 S-----------------------------------YQNVLTLLRGMQSLGFRPNGSSVS 536
                                               Y   + + R MQ+L  RP+  ++ 
Sbjct: 401 DDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITIL 460

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            ++ A T L      RE H  I  + L+ D  +  +L++ Y K+  L +A  VFD   +R
Sbjct: 461 SIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSR 520

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           NI++WN +I  +   G    A  +  QM++E + PD  +  +++  Y + G+  E     
Sbjct: 521 NIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTF 580

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            +M N   I P +  + +++    ++   +E+ +   +M    + PNST   + L
Sbjct: 581 FNMANDYNITPELDHYAAMVDLLGRSGRLKEAYELIDEMP---LIPNSTVWDTFL 632



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 39/322 (12%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
           C ++     + L+  K  H+  IK+G + N+     SL+  Y + G+  +A + F     
Sbjct: 290 CAISACASLKLLNQAKELHSHAIKVGSV-NNVLSGNSLVDMYAKCGEIVAAWRIFSGIPD 348

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           +    W+S +  Y    G   +  E++ ++   GV  R  ++T            W    
Sbjct: 349 KDIFSWNSMISGYAQ-AGYCGKAYELFCKMENYGV--RRNVIT------------W--NT 391

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           + +  I+ G D        +M  +G  RD  +                WN +I   + N 
Sbjct: 392 MISGYIRNGDDERAFELFQMMESHGVKRDTAT----------------WNILIAGSVHNG 435

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            ++ AI++FR+MQ    +    TI+ ++ A   + A  + ++IH  +    LE +  + N
Sbjct: 436 YYDRAIRIFRQMQALLRRPDYITILSIIPAFTNLVASWKVREIHACIFHHNLELDGKIAN 495

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            LI+ YS++  L  A  VFD     N+ SWN +I ++   G  + A  LF +M    + P
Sbjct: 496 ALINAYSKSGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVP 555

Query: 496 DIITWNCL-----LSGHFTHGS 512
           D  T   +     L+G  + GS
Sbjct: 556 DHTTLVTVIKAYGLTGKVSEGS 577



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/380 (19%), Positives = 147/380 (38%), Gaps = 75/380 (19%)

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T L+ ++     L +A+EVFD M  R+++AW+++I  Y  +G++ +   +   M EE + 
Sbjct: 49  TKLITVHSCAGRLGDAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVTMVEEGVL 108

Query: 631 PDLV-------------------SWNSLVSGYSIWGQSKEAL----VIIHHMK------- 660
           PD                     + +S+       G+ K+      V++ + K       
Sbjct: 109 PDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLGWA 168

Query: 661 ----NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
               +  +  ++ TW S+I G  ++  + E+      M+QE  +P   T ++L+ +    
Sbjct: 169 RKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARF 228

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
           G                   D  VA  L+    +SG                + +W  ++
Sbjct: 229 G-------------------DLDVAMELLGQMEESG------------VAPDVVTWTSLV 257

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
            GF       EA+  F  +   G +P+ ++    ++AC +  L+ +  K   S +     
Sbjct: 258 SGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQA-KELHSHAIKVGS 316

Query: 837 IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
           +  +   + +VD+  K G +  AW     +P K D   W +++      G+   A     
Sbjct: 317 VNNVLSGNSLVDMYAKCGEIVAAWRIFSGIPDK-DIFSWNSMISGYAQAGYCGKA----Y 371

Query: 897 RLFKLEPCNSANYNLMMNLL 916
            LF    C   NY +  N++
Sbjct: 372 ELF----CKMENYGVRRNVI 387



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 116/262 (44%), Gaps = 20/262 (7%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFS----RSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           ++I  Y+  GD   A + F +  S    R  A W+  +       G     + ++ ++  
Sbjct: 391 TMISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAG-SVHNGYYDRAIRIFRQM-- 447

Query: 288 KGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
           + ++ R   +TI  I+   T L+A W   E+HA +     + D  +  AL+N Y K  ++
Sbjct: 448 QALLRRPDYITILSIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNL 507

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
            SA  +F ++    + + WN II+  + +     A+ LF +M+         T+V +++A
Sbjct: 508 ASACAVF-DMHSSRNIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKA 566

Query: 406 CAKVGAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-D 459
               G   EG Q      + Y +   L+   +    ++ +  R+ +L+ A  + D M   
Sbjct: 567 YGLTGKVSEGSQTFFNMANDYNITPELDHYAA----MVDLLGRSGRLKEAYELIDEMPLI 622

Query: 460 HNLSSWNSMISSYTGLGYVDVA 481
            N + W++ +++    G V +A
Sbjct: 623 PNSTVWDTFLTAAVMHGNVRLA 644


>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
          Length = 656

 Score =  368 bits (945), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 339/619 (54%), Gaps = 15/619 (2%)

Query: 461  NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
            ++  +N++I+ Y   G + +A  +F+ M S     + ++ N L+SG+ + G +++ L LL
Sbjct: 49   DVVQYNNLIALYVKCGRLGLARQVFDAMPSR----NPVSGNLLMSGYASSGRHRDALALL 104

Query: 521  RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
            R      F  N   +S  + A   +R    GR+ HGY ++ GL    YV ++++ MY + 
Sbjct: 105  R---VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQC 161

Query: 581  DCLQNAQEVFDNMKNRNIVAWNSLIS---GYCFKGL-FVNAKKMLNQMEEEEIKPDLVSW 636
              +  A +       +     + +I    G+C      V   ++  Q  +  ++ ++   
Sbjct: 162  AHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVG 221

Query: 637  NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
            ++LV  Y       EA  +   +       N+V+WT++++   QNE + ++L+ F+ M+ 
Sbjct: 222  SALVDMYGKCDFPHEANRVFEVLPEK----NIVSWTAIMTAYTQNELFEDALQLFLDMEM 277

Query: 697  EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
            E ++PN  T +  L +C GL  L+NG  +    +K G      V   L++MYSKSG+++ 
Sbjct: 278  EGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVED 337

Query: 757  AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
            AR VF     + + SWN +I+G+A +G  +EA+  FH++L     P  +TF  +L+AC  
Sbjct: 338  ARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQ 397

Query: 817  SGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWG 876
             GLV+EG+ Y + M  +  + P  EHY+CMV LL + G LDEA  FI +     D   W 
Sbjct: 398  LGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWR 457

Query: 877  ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
            +LL SC+++ +       + ++F+L+P +   Y L+ N+ A +NRW+ V ++R  M E+G
Sbjct: 458  SLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELG 517

Query: 937  VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDID 996
            V+     SWIQ+   VHVF++E   HP   +I  +L  L+ ++K +GYVP+      D++
Sbjct: 518  VRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVE 577

Query: 997  EEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLR 1056
            +E+K + L+ H+EKLA+ +GL++T     IR++KN R+C DCH A K +SL  GR I +R
Sbjct: 578  DEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVR 637

Query: 1057 DGARFHHFREGECSCNDCW 1075
            D  RFH   +G CSC+D W
Sbjct: 638  DTVRFHCIEDGVCSCDDYW 656



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 19/289 (6%)

Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
           S ++  +L  C       LG +VH   +KR  + +V++  AL++ YGKC     AN++F 
Sbjct: 183 SCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVF- 241

Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
           EV   ++ + W  I+    +NE +E+A++LF +M+    +    T    L +CA +    
Sbjct: 242 EVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLK 301

Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
            G  +    +K+     L VCN L++MYS++  +E A RVF SM   ++ SWNS+I  Y 
Sbjct: 302 NGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYA 361

Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG------SYQNVLTLLRGMQSLG 527
             G    A   F+ M  +   P  +T+  +LS     G       Y N++     M+ +G
Sbjct: 362 HHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIM-----MKEVG 416

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGR--ESHGYILRNGLDYDLYVGTSLM 574
            +P     + ++       L + GR  E+  +I  N +  D+    SL+
Sbjct: 417 VKPGKEHYTCMVGL-----LCRVGRLDEAERFIESNCIGTDVVAWRSLL 460



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 190/438 (43%), Gaps = 44/438 (10%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG  VHA ++ R   FDV     L+  Y KC  +  A ++F  +    + +  N ++   
Sbjct: 34  LGKAVHARVV-RAARFDVVQYNNLIALYVKCGRLGLARQVFDAMPS-RNPVSGNLLMSGY 91

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
             + +  +A+ L R   F   + +  + V    A A V ++  G+Q HGY +K+ L  + 
Sbjct: 92  ASSGRHRDALALLRVADFGLNEYVLSSAVA---ATAHVRSYDMGRQCHGYAIKAGLAEHP 148

Query: 432 SVCNCLISMYSRNNKLELATR---------------VFDSMKDHNLSSWNSMISS----- 471
            VC+ ++ MY +   ++ A +               V   +  H  S+   ++ S     
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQ 208

Query: 472 ----------YTGLGYVDVAWSLFNKMNSSRI-----QPDIITWNCLLSGHFTHGSYQNV 516
                     Y G   VD+         ++R+     + +I++W  +++ +  +  +++ 
Sbjct: 209 ALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDA 268

Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDM 576
           L L   M+  G RPN  + +V L +   L  LK G       ++ G    L V  +LM+M
Sbjct: 269 LQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNM 328

Query: 577 YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
           Y K+  +++A+ VF +M  R++V+WNS+I GY   G    A +  + M   E  P  V++
Sbjct: 329 YSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTF 388

Query: 637 NSLVSGYSIWGQSKEALVIIH-HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
             ++S  +  G   E    ++  MK  G+ P    +T ++    +     E+ +F   ++
Sbjct: 389 IGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERF---IE 445

Query: 696 QEDIKPNSTTMSSLLQTC 713
              I  +     SLL +C
Sbjct: 446 SNCIGTDVVAWRSLLSSC 463



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 198/481 (41%), Gaps = 94/481 (19%)

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G    GK +H  V+++A   ++   N LI++Y +  +L LA +VFD+M   N  S N ++
Sbjct: 30  GELSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88

Query: 470 SSYTGLGYVDVAWSLFN----KMNSSRIQPDIITWNCLLS---GHFTHG--------SYQ 514
           S Y   G    A +L       +N   +   +     + S   G   HG         + 
Sbjct: 89  SGYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148

Query: 515 NVLTLLRGM--------QSLGF--------RPNGSSVSV-VLQAVTELRLLKYGRESHGY 557
            V + +  M        +++ +        R  GS V   VL      + +  G + H  
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQ 208

Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
            L+  L+ ++YVG++L+DMY K D    A  VF+ +  +NIV+W ++++ Y    LF +A
Sbjct: 209 ALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDA 268

Query: 618 KKMLNQMEEEEIKPDLVSW-----------------------------------NSLVSG 642
            ++   ME E ++P+  ++                                   N+L++ 
Sbjct: 269 LQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNM 328

Query: 643 YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPN 702
           YS  G  ++A  +   M       +VV+W S+I G   +   RE+++ F  M   +  P+
Sbjct: 329 YSKSGSVEDARRVFLSMPCR----DVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPS 384

Query: 703 STTMSSLLQTCGGLGLLQNG--------KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNL 754
             T   +L  C  LGL+  G        KE+    +K G  K+ Y  T ++ +  + G L
Sbjct: 385 YVTFIGVLSACAQLGLVDEGFYYLNIMMKEVG---VKPG--KEHY--TCMVGLLCRVGRL 437

Query: 755 KSAREVFRKSANKT-LASWNCMIMGFAIYGNGKEAILLFHELLETGFQ--PDAITFTALL 811
             A      +   T + +W  ++    +Y N      L H + E  FQ  P  +    LL
Sbjct: 438 DEAERFIESNCIGTDVVAWRSLLSSCQVYRNYG----LGHRVAEQIFQLKPKDVGTYVLL 493

Query: 812 A 812
           +
Sbjct: 494 S 494



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 172/400 (43%), Gaps = 22/400 (5%)

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L  G+  H  ++R    +D+    +L+ +YVK   L  A++VFD M +RN V+ N L+SG
Sbjct: 32  LSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90

Query: 608 YCFKGLFVNAKKMLNQME---EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
           Y   G   +A  +L   +    E +    V+  + V  Y +  Q     +       +G+
Sbjct: 91  YASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAI------KAGL 144

Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
             +    ++++    Q  +  E++K+  +  ++     S  +  +L  C     +  G +
Sbjct: 145 AEHPYVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQ 204

Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGN 784
           +H   LK     + YV + L+DMY K      A  VF     K + SW  ++  +     
Sbjct: 205 VHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNEL 264

Query: 785 GKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD-SMSTDY-NIIPTIEH 842
            ++A+ LF ++   G +P+  T+   L +C     ++ G      +M T +  ++P    
Sbjct: 265 FEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVC-- 322

Query: 843 YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLE 902
            + ++++  K+G +++A     +MP + D   W +++     HG    A  A   +   E
Sbjct: 323 -NALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSIIIGYAHHGRAREAMEAFHDMLFAE 380

Query: 903 PCNSANYNLMMNLLAMSNRWEDVER----LRHSMDEVGVK 938
              S  Y   + +L+   +   V+     L   M EVGVK
Sbjct: 381 EVPS--YVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK 418


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 238/803 (29%), Positives = 411/803 (51%), Gaps = 92/803 (11%)

Query: 320  LIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
            ++K G   D+++  AL++ + +    + A  +F  +   ++ +  N +I+  +R +  E 
Sbjct: 301  VLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQ-KNAVTLNGLIVGLVRQDFSEE 359

Query: 380  AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG----KQIHGYVLKSAL-ESNLSVC 434
            A+K+F   + ++    + T V +L A A+     EG    + +HG++L++ L +  ++V 
Sbjct: 360  AVKIFVGTR-NTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVS 418

Query: 435  NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
            N L++MY++                                G ++ A  +F  M ++   
Sbjct: 419  NGLVNMYAK-------------------------------CGAIESASKIFQLMEAT--- 444

Query: 495  PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
             D I+WN ++S    +G+ +  +     M+     P+  ++   L +   L+LL  G++ 
Sbjct: 445  -DRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQV 503

Query: 555  HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
            H   ++ GLD D  V   L+ MY +   + +  +VF++M   + V+WN+++      G+ 
Sbjct: 504  HCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMM------GVM 557

Query: 615  VNAK-------KMLNQMEEEEIKPDLVSWNSLVSGYSIW-----GQSKEALVIIHHMKNS 662
             +++       K+ N M    + P+ V++ +L++  S       G+   A V+ H +   
Sbjct: 558  ASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMED 617

Query: 663  GIYPNV---------------------------VTWTSLISGSLQNENYRESLKFFIQMQ 695
             +  N                            ++W S+ISG + N N +E++     M 
Sbjct: 618  NVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMI 677

Query: 696  QEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLK 755
                  +  T S +L  C  +  L+ G E+H   +++    D  V + L+DMYSK G + 
Sbjct: 678  HSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVD 737

Query: 756  SAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
             A ++F     +   SWN MI G+A +G G++AI +F E+L +   PD +TF ++L+AC 
Sbjct: 738  YASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACS 797

Query: 816  NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
            ++GLVE G +YF+ M  D+ I+P IEHYSC++DLLG+AG +D+  ++I+ MP +P+A IW
Sbjct: 798  HAGLVERGLEYFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIW 856

Query: 876  GALLGSCRIH---GHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
              +L +CR      +++    ASR L ++EP N  NY L  N  A +  WED  + R +M
Sbjct: 857  RTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAM 916

Query: 933  DEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVY 992
             +   K     SW+ ++  VH F A    HP T EIY +L  L+  ++  GYVP T    
Sbjct: 917  RQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTEYAL 976

Query: 993  QDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGRE 1052
             D++EE K ++L  H+EKLAI + L ++ S  PIR++KN RVC DCH A +Y+S +  R+
Sbjct: 977  YDLEEENKEELLSYHSEKLAIAFVLTRSSS-GPIRIMKNLRVCGDCHIAFRYISQMISRQ 1035

Query: 1053 IFLRDGARFHHFREGECSCNDCW 1075
            I LRD  RFHHF++G+CSC D W
Sbjct: 1036 IILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 222/493 (45%), Gaps = 84/493 (17%)

Query: 312 LGVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMV 370
           +G  VH  +++ G  D  + +   L+N Y KC  +ESA+K+F ++ +  D + WN II  
Sbjct: 397 IGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIF-QLMEATDRISWNTIISA 455

Query: 371 KLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN 430
             +N   E A+  +  M+ S     +  ++  L +CA +     G+Q+H   +K  L+ +
Sbjct: 456 LDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLD 515

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI----SSYTGLGYVDVAWSLFN 486
            SV N L+ MY     +    +VF+SM +H+  SWN+M+    SS T +  +     +FN
Sbjct: 516 TSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEI---VKVFN 572

Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
            M                               +RG    G  PN  +   +L A++ L 
Sbjct: 573 NM-------------------------------MRG----GLIPNKVTFINLLAALSPLS 597

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN-RNIVAWNSLI 605
           +L+ G++ H  ++++G+  D  V  +L+  Y K+  + + + +F NM + R+ ++WNS+I
Sbjct: 598 VLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMI 657

Query: 606 SGYCFKG-------------------------LFVNAKKMLNQME----------EEEIK 630
           SGY + G                         + +NA   +  +E             ++
Sbjct: 658 SGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLE 717

Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
            D+V  ++LV  YS  G+   A      + NS    N  +W S+ISG  ++   R++++ 
Sbjct: 718 SDVVVESALVDMYSKCGRVDYA----SKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEI 773

Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
           F +M +    P+  T  S+L  C   GL++ G E   +   +G +      + +ID+  +
Sbjct: 774 FEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGR 833

Query: 751 SGNLKSAREVFRK 763
           +G +   +E  ++
Sbjct: 834 AGKIDKIKEYIQR 846



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 167/734 (22%), Positives = 303/734 (41%), Gaps = 101/734 (13%)

Query: 208 SSVKSKHAQMIKMGKIWNSDD-MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           +S ++ H ++IK G   N D  +   L+  Y +     +A++ F     R+   W+  + 
Sbjct: 78  NSPENLHVELIKRG--LNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVS 135

Query: 267 DYESFGGEVQELLEVWGELHGK---GVIFRSRILTIILKLCTKLMAFWLG--VEVHASLI 321
            Y    G  +E   V+  +  +   G    S     +L+ C       LG  V+VH  + 
Sbjct: 136 GY-VLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVS 194

Query: 322 KRGFDFDVHLKCALMNFYGKCRDVES--ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWEN 379
           K  +  +  +  AL++ YG C       A ++F + + + D + WN ++ V  +     +
Sbjct: 195 KTEYASNTTVCNALISMYGSCTVGPPILAQRVF-DGTPIRDLITWNALMSVYAKKGDVAS 253

Query: 380 AIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVC 434
              LF++MQ   ++   R       +     +   G      Q+  +VLKS   S+L V 
Sbjct: 254 TFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVG 313

Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
           + L+S ++R+   + A  +F S+K  N  + N +I    GL   D +         +R  
Sbjct: 314 SALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLI---VGLVRQDFSEEAVKIFVGTRNT 370

Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL----LKY 550
            D+                                 N  +  V+L A+ E  +    L+ 
Sbjct: 371 VDV---------------------------------NADTYVVLLSALAEYSISEEGLRI 397

Query: 551 GRESHGYILRNGL-DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
           GR  HG++LR GL D  + V   L++MY K   +++A ++F  M+  + ++WN++IS   
Sbjct: 398 GRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALD 457

Query: 610 FKGLFVNAKKMLNQMEEEEIKP--------------------------DLVSW------- 636
             G    A    + M +  I P                          D V W       
Sbjct: 458 QNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTS 517

Query: 637 --NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN-YRESLKFFIQ 693
             N LV  Y   G   +   + + M       + V+W +++     ++    E +K F  
Sbjct: 518 VSNVLVKMYGECGAMSDYWKVFNSMAEH----DEVSWNTMMGVMASSQTPISEIVKVFNN 573

Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
           M +  + PN  T  +LL     L +L+ GK++H   +K+G ++D  V   LI  Y+KSG+
Sbjct: 574 MMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGD 633

Query: 754 LKSAREVFRKSANKTLA-SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
           + S   +F   +++  A SWN MI G+   GN +EA+     ++ +G   D  TF+ +L 
Sbjct: 634 MGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILN 693

Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
           AC +   +E G +   +     ++   +   S +VD+  K G +D A     +M  + + 
Sbjct: 694 ACASVAALERGME-LHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEF 752

Query: 873 TIWGALLGSCRIHG 886
           + W +++     HG
Sbjct: 753 S-WNSMISGYARHG 765



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 164/356 (46%), Gaps = 5/356 (1%)

Query: 189 SCIS-SGFCFLNETNK---FRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFT 244
           SCIS S F  ++  +     + L++ +  H   +K G   ++  +   L+  Y E G  +
Sbjct: 475 SCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTS-VSNVLVKMYGECGAMS 533

Query: 245 SAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
              K F          W++ +    S    + E+++V+  +   G+I        +L   
Sbjct: 534 DYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAAL 593

Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
           + L    LG +VHA+++K G   D  +  AL++ Y K  D+ S   LF+ +SD  D + W
Sbjct: 594 SPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISW 653

Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
           N +I   + N   + A+     M  S       T   +L ACA V A   G ++H + ++
Sbjct: 654 NSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIR 713

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           S LES++ V + L+ MYS+  +++ A+++F+SM   N  SWNSMIS Y   G    A  +
Sbjct: 714 SHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEI 773

Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
           F +M  SR  PD +T+  +LS     G  +  L     M   G  P     S V+ 
Sbjct: 774 FEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVID 829



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 115/523 (21%), Positives = 218/523 (41%), Gaps = 94/523 (17%)

Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
           G  +  + +H  ++K  L  +L +CN L++ Y++  +L  A++VFD M + N  SW  ++
Sbjct: 75  GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134

Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
           S Y   G  + A+ +F  M                               LR +Q+ G R
Sbjct: 135 SGYVLHGIAEEAFRVFRAM-------------------------------LREVQA-GCR 162

Query: 530 PNGSSVSVVLQAVTE--LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN-- 585
           P   +   +L+A  +     L +  + HG + +     +  V  +L+ MY    C     
Sbjct: 163 PTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMY--GSCTVGPP 220

Query: 586 --AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE----EIKP-------- 631
             AQ VFD    R+++ WN+L+S Y  KG   +   +   M+      +++P        
Sbjct: 221 ILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSL 280

Query: 632 ----------------------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG 663
                                       DL   ++LVS ++  G + EA  I   +K   
Sbjct: 281 ITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQK- 339

Query: 664 IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL----L 719
              N VT   LI G ++ +   E++K F+  +   +  N+ T   LL       +    L
Sbjct: 340 ---NAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSISEEGL 395

Query: 720 QNGKEIHCLCLKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           + G+ +H   L+ G       V+ GL++MY+K G ++SA ++F+        SWN +I  
Sbjct: 396 RIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISA 455

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNII 837
               GN +EA++ +  + ++   P      + L++C    L+  G + + D++    ++ 
Sbjct: 456 LDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLD 515

Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            ++ +   +V + G+ G + + W    +M  + D   W  ++G
Sbjct: 516 TSVSNV--LVKMYGECGAMSDYWKVFNSMA-EHDEVSWNTMMG 555


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 202/600 (33%), Positives = 317/600 (52%), Gaps = 33/600 (5%)

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            H   GS  + L + R +     RP+ ++ ++ L A   L  L+ G          G   D
Sbjct: 84   HSRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            ++V +SL+ +Y +   + +A +VF  M  R+ V W+++++G+   G  ++A +M  +M E
Sbjct: 143  VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT---------------- 670
            + +K D V    ++   +     +    +  H+   G+  +VVT                
Sbjct: 203  DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262

Query: 671  ---------------WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                           W+++ISG  QN    E+L+ F  MQ   I+P+S  + S L  C  
Sbjct: 263  ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            +G L+ G+ +H   ++  F  +  + T  IDMYSK G+L SA+ +F   +++ L  WN M
Sbjct: 323  IGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I     +G G++A+ LF E+ ETG +PD  TF +LL+A  +SGLVEEG  +F  M   + 
Sbjct: 382  IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFK 441

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P  +HY C+VDLL ++G ++EA D + +M  +P   IW ALL  C  +  LE  E  +
Sbjct: 442  ITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIA 501

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
              + +L+P +     L+ NL A + +W+ V ++R  M + G K +   S I+I    HVF
Sbjct: 502  DNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVF 561

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
              E   HP   EI  ++  L  EM+K+GY+P T  VY D++EE K + L  H+E+LAI +
Sbjct: 562  VMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAF 621

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ T     + +IKN RVC DCH A KY+S +  REI +RD  RFHHF++G CSC D W
Sbjct: 622  GLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 220/510 (43%), Gaps = 74/510 (14%)

Query: 226 SDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL 285
           S  ++ SL   Y   GD  +A        + S     + +    S  G     L V+  L
Sbjct: 41  SHTLISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRAL 100

Query: 286 HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
                   S   T+ L  C +L     G  V       G+  DV +  +L++ Y +   +
Sbjct: 101 P-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAM 159

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
             A K+F  +    D + W+ ++   +   +  +AI+++R M+    K     ++ ++QA
Sbjct: 160 GDAVKVFVRMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQA 218

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
           C        G  +HG++L+  +  ++     L+ MY++N  L++A RVF  M   N  SW
Sbjct: 219 CTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSW 278

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           ++MIS +   G  D A  LF  M +S IQPD                             
Sbjct: 279 SAMISGFAQNGQSDEALRLFRNMQASGIQPD----------------------------- 309

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
                +G+ VS +L A + +  LK GR  HG+I+R   D++  +GT+ +DMY K   L +
Sbjct: 310 -----SGALVSALL-ACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLAS 362

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           AQ +F+ + +R+++ WN++I+     G   +A  +  +M E  ++PD  ++ SL+S  S 
Sbjct: 363 AQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSH 422

Query: 646 WGQSKEALV----IIHHMK----------------NSGIY-------------PNVVTWT 672
            G  +E  +    +++H K                 SG+              P V  W 
Sbjct: 423 SGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWV 482

Query: 673 SLISGSLQNENYR--ESL-KFFIQMQQEDI 699
           +L+SG L N+     ES+    +++Q +D+
Sbjct: 483 ALLSGCLNNKKLELGESIADNILELQPDDV 512



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 211/481 (43%), Gaps = 88/481 (18%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           R     +A+++FR +   +A+  S T    L ACA++G    G+ +      +  + ++ 
Sbjct: 86  RRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           VC+ L+ +Y+R   +  A +VF  M                                   
Sbjct: 145 VCSSLLHLYARWGAMGDAVKVFVRMP---------------------------------- 170

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + D +TW+ +++G  + G   + + + R M+  G + +   +  V+QA T  R ++ G 
Sbjct: 171 -RRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGA 229

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             HG++LR+G+  D+   TSL+DMY KN  L  A  VF  M +RN V+W+++ISG+   G
Sbjct: 230 SVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNG 289

Query: 613 LFVNAKKMLNQMEEEEIKPD---LVS-------------------------------WNS 638
               A ++   M+   I+PD   LVS                                 +
Sbjct: 290 QSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILGTA 349

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            +  YS  G    A ++ + + +     +++ W ++I+    +   +++L  F +M +  
Sbjct: 350 AIDMYSKCGSLASAQMLFNMISDR----DLILWNAMIACCGAHGRGQDALTLFQEMNETG 405

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA---YVATGLIDMYSKSGNLK 755
           ++P+  T +SLL      GL++ GK      + +  I  A   YV   L+D+ ++SG ++
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVC--LVDLLARSGLVE 463

Query: 756 SAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAIL---LFHELLETGFQPDAITFTALL 811
            A ++     A  T+A W  ++ G     N K+  L   +   +LE   QPD +   AL+
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCL---NNKKLELGESIADNILE--LQPDDVGVLALV 518

Query: 812 A 812
           +
Sbjct: 519 S 519


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
            mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/576 (34%), Positives = 322/576 (55%), Gaps = 34/576 (5%)

Query: 533  SSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDCLQNAQEVFD 591
            S V  ++ A++    + Y    H  ++++ L+Y D ++G  L+ MY K    ++AQ +FD
Sbjct: 120  SIVQSLVFAISSCTSVSYCSAIHARVIKS-LNYSDGFIGDRLVSMYFKLGYDEDAQRLFD 178

Query: 592  NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK-PDLVSWNSLVS-----GYSI 645
             M N+++V+WNSL+SG   +G          +M  E  + P+ V+  S+VS     G   
Sbjct: 179  EMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALD 238

Query: 646  WGQSKEALVIIHHMKNSGIYPN--------------------------VVTWTSLISGSL 679
             G+S   +V+   M       N                          +V+W S++    
Sbjct: 239  EGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 298

Query: 680  QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
             N    + +  F  M++  I P+  TM +LL+ C   GL +  + IH    + GF  D  
Sbjct: 299  HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADII 358

Query: 740  VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
            +AT L+++Y+K G L ++ ++F +  ++   +W  M+ G+A++  G+EAI LF  +++ G
Sbjct: 359  IATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEG 418

Query: 800  FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
             + D +TFT LL+AC +SGLVEEG KYF+ MS  Y + P ++HYSCMVDLLG++G L++A
Sbjct: 419  VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA 478

Query: 860  WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
            ++ I++MP +P + +WGALLG+CR++G++E  +  + +L  L+P +  NY ++ N+ + +
Sbjct: 479  YELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAA 538

Query: 920  NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
              W D  ++R  M E  +      S+I+    +H F      HP + EI+ +L  L+ ++
Sbjct: 539  GLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKI 598

Query: 980  KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
            ++ G  P T  V  DIDEE K  ++  H+EKLAI +GL+ T S  P+ + KN R+C DCH
Sbjct: 599  REAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCH 658

Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            + AK+ SL+  R I +RD  RFHHF +G CSC D W
Sbjct: 659  STAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 193/413 (46%), Gaps = 43/413 (10%)

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           +HA +IK     D  +   L++ Y K    E A +LF E+ + +D + WN + M  L   
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN-KDLVSWNSL-MSGLSGR 198

Query: 376 KWENA-IKLFREMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
            +  A +  F  M+  S +  +  T++ ++ ACA +GA  EGK +HG V+K  +     V
Sbjct: 199 GYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKV 258

Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
            N LI+MY +   L+ A+++F+ M   +L SWNSM+  +   GY +    LFN M  + I
Sbjct: 259 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGI 318

Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
            PD  T                                   +  +L+A T+  L +    
Sbjct: 319 NPDQAT-----------------------------------MVALLRACTDTGLGRQAES 343

Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGL 613
            H YI R G + D+ + T+L+++Y K   L  ++++F+ +K+R+ +AW ++++GY     
Sbjct: 344 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 403

Query: 614 FVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWT 672
              A K+ + M +E ++ D V++  L+S  S  G  +E       M     + P +  ++
Sbjct: 404 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYS 463

Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
            ++    ++    ++ +    M  E   P+S    +LL  C   G ++ GKE+
Sbjct: 464 CMVDLLGRSGRLEDAYELIKSMPME---PSSGVWGALLGACRVYGNVELGKEV 513



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 168/376 (44%), Gaps = 45/376 (11%)

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
            RV  S+   +    + ++S Y  LGY + A  LF++M +     D+++WN L+SG    
Sbjct: 143 ARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK----DLVSWNSLMSGLSGR 198

Query: 511 GSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
           G     L     M++  G +PN  ++  V+ A  ++  L  G+  HG +++ G+     V
Sbjct: 199 GYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKV 258

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
             SL++MY K   L  A ++F+ M  R++V+WNS++  +   G       + N M+   I
Sbjct: 259 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGI 318

Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV--------------------- 668
            PD  +  +L+   +  G  ++A  I  ++   G   ++                     
Sbjct: 319 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 378

Query: 669 ----------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
                     + WT++++G   +   RE++K F  M +E ++ +  T + LL  C   GL
Sbjct: 379 IFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 438

Query: 719 LQNGK---EIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNC 774
           ++ GK   EI     +     D Y  + ++D+  +SG L+ A E+ +      +   W  
Sbjct: 439 VEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGA 496

Query: 775 MIMGFAIYGN---GKE 787
           ++    +YGN   GKE
Sbjct: 497 LLGACRVYGNVELGKE 512



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/396 (22%), Positives = 171/396 (43%), Gaps = 37/396 (9%)

Query: 130 LTRQNTAIVMPKLHSIYHHFNTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLS 189
             +Q T + +P  +SI       TSI+ NR             S A   TD + KQ +  
Sbjct: 55  FNQQLTRLAVP-WNSIVSPVRCGTSISHNR-------------SFAFRHTDLIPKQFKRF 100

Query: 190 CISSGFCFLNETNKFRCLSSV-----------------KSKHAQMIKMGKIWNSDDMV-K 231
             + G C   E ++F  + S+                  + HA++IK   +  SD  +  
Sbjct: 101 NTNKGCCIFREASQFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIK--SLNYSDGFIGD 158

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK-GV 290
            L+  Y + G    A + F    ++    W+S +    S  G +   L  +  +  + G 
Sbjct: 159 RLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGL-SGRGYLGACLNAFCRMRTESGR 217

Query: 291 IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
                 L  ++  C  + A   G  +H  ++K G      +  +L+N YGK   +++A++
Sbjct: 218 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 277

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG 410
           LF E+  +   + WN ++++   N   E  + LF  M+ +       T+V +L+AC   G
Sbjct: 278 LFEEMP-VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG 336

Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
              + + IH Y+ +    +++ +   L+++Y++  +L  +  +F+ +KD +  +W +M++
Sbjct: 337 LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLA 396

Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
            Y        A  LF+ M    ++ D +T+  LLS 
Sbjct: 397 GYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 432


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 228/711 (32%), Positives = 375/711 (52%), Gaps = 56/711 (7%)

Query: 417  QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
            Q+H ++  + L  +      LI  Y++    E + RVFD+    +   W  +I  Y   G
Sbjct: 366  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 425

Query: 477  YVDVAWSLFNKMN-------SSRIQPDIITWNCLLSGHFT----HGSYQNVLTLLRGMQS 525
            + + A SL+++M        S+ + P ++   C   G  +    +G     L +   M S
Sbjct: 426  FFEEAVSLYHEMVYQDQTQISNFVFPSVLK-ACSGFGDLSVGGKNGQASEGLDMFSQMIS 484

Query: 526  LGFRPNGSSVSVVLQAVTEL------RL--LKYGRESHGYILRNGLDYDL-YVGTSLMDM 576
                P+  ++  V +A +EL      RL  +K GR  HG+++R  +D +L ++G +LM++
Sbjct: 485  EAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMEL 544

Query: 577  YVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---- 632
            Y     L++  +VF+ +K + I++WN+LIS +   G    A  +  QM+ + + PD    
Sbjct: 545  YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 604

Query: 633  --------LVSWNSL---VSGYSIWGQS-----KEALVIIH------HMKNSGIYP---- 666
                     +S++ L   + GY I   +     + AL+ ++      H  N         
Sbjct: 605  ASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEK 664

Query: 667  NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
            ++VTW S+I G  QN    E++  F QM    +K +  T  S++Q C  LG L+ GK +H
Sbjct: 665  SLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVH 724

Query: 727  CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
               +  G  KD+Y+ T L DMYSK G L+ A  VF + + +++ SW+ MI G+ ++G   
Sbjct: 725  HKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQIN 784

Query: 787  EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
              I LF+++L +G +P+ ITF  +L+AC ++G VEEG  YF+SMS ++ + P  +H++CM
Sbjct: 785  ATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACM 843

Query: 847  VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
            VDLL +AG L+ A+  I ++PF  +++IWGALL  CRIH  ++  +   + L  ++  ++
Sbjct: 844  VDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADT 903

Query: 907  ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
              Y L+ N+ A    W+   ++R  M   G++ V  +S I+ID+ ++ F      H  T 
Sbjct: 904  GYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTK 963

Query: 967  EIYFELYHLVSEMKKLGY--VPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
            +IY  L +  S +    Y   PD   V      +E    ++SH+EKLAI +G++ T+   
Sbjct: 964  DIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENN--VVSHSEKLAIAFGIINTRPGT 1021

Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
             +R+ KN RVC DCH+ AK  S + GREI +RD  RFH FR G CSCND W
Sbjct: 1022 TLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 160/320 (50%), Gaps = 3/320 (0%)

Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
           +S H  +I+       D +  +L+  Y + G+     K F     ++   W++ +  + +
Sbjct: 519 RSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF-T 577

Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
             G+ +E L ++ ++  +G++  S  L   L  C  +    LG ++H  +IK G +F+  
Sbjct: 578 RNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDF 636

Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
           ++ AL++ Y KC  V SANK+F ++ + +  + WN +I    +N     AI LF +M  +
Sbjct: 637 VQNALIDMYAKCGFVHSANKMFEKIKE-KSLVTWNSMICGFSQNGYSVEAITLFDQMYMN 695

Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
             K    T + ++QAC+ +G   +GK +H  ++   L  +  +   L  MYS+  +L++A
Sbjct: 696 CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMA 755

Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
             VFD M + ++ SW+ MI+ Y   G ++   SLFN+M  S I+P+ IT+  +LS     
Sbjct: 756 HGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHA 815

Query: 511 GSYQNVLTLLRGMQSLGFRP 530
           G+ +        M   G  P
Sbjct: 816 GAVEEGKLYFNSMSEFGVEP 835



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/453 (21%), Positives = 201/453 (44%), Gaps = 81/453 (17%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH--------EGKQIHGYVLK 424
           +N +    + +F +M   + +  S T++ + +AC+++G+          EG+ +HG+V++
Sbjct: 468 KNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIR 527

Query: 425 SALESNLSVCN-CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
            A++  L      L+ +Y+    L    +VF+++K+                        
Sbjct: 528 RAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKT---------------------- 565

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
                        I++WN L+S    +G  +  L L   MQ+ G  P+  S++  L A  
Sbjct: 566 -------------ILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACG 612

Query: 544 ELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNS 603
            +   + G + HGYI++ G +++ +V  +L+DMY K   + +A ++F+ +K +++V WNS
Sbjct: 613 TISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNS 671

Query: 604 LISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM---- 659
           +I G+   G  V A  + +QM    +K D +++ S++   S  G  ++   + H +    
Sbjct: 672 MICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYG 731

Query: 660 --KNS--------------------GIYP-----NVVTWTSLISGSLQNENYRESLKFFI 692
             K+S                    G++      ++V+W+ +I+G   +     ++  F 
Sbjct: 732 LRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFN 791

Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
           QM    IKPN  T   +L  C   G ++ GK       + G          ++D+ S++G
Sbjct: 792 QMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAG 851

Query: 753 NLKSAREVFRK---SANKTLASWNCMIMGFAIY 782
           +L  A ++       AN ++  W  ++ G  I+
Sbjct: 852 DLNGAYQIITSLPFPANSSI--WGALLNGCRIH 882



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 7/259 (2%)

Query: 214 HAQMIKMGKIWNSDDMVK-SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H  +IK G   N +D V+ +LI  Y + G   SA K F     +S   W+S +  +   G
Sbjct: 624 HGYIIKTG---NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNG 680

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             V E + ++ +++   V         +++ C+ L     G  VH  LI  G   D +L 
Sbjct: 681 YSV-EAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLD 739

Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
            AL + Y KC +++ A+ +F  +S+    + W+ +I     + +    I LF +M  S  
Sbjct: 740 TALTDMYSKCGELQMAHGVFDRMSE-RSIVSWSVMIAGYGMHGQINATISLFNQMLGSGI 798

Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
           K    T + +L AC+  GA  EGK     + +  +E       C++ + SR   L  A +
Sbjct: 799 KPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQ 858

Query: 453 VFDSMK-DHNLSSWNSMIS 470
           +  S+    N S W ++++
Sbjct: 859 IITSLPFPANSSIWGALLN 877


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 202/600 (33%), Positives = 317/600 (52%), Gaps = 33/600 (5%)

Query: 507  HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
            H   GS  + L + R +     RP+ ++ ++ L A   L  L+ G          G   D
Sbjct: 84   HSRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142

Query: 567  LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
            ++V +SL+ +Y +   + +A +VF  M  R+ V W+++++G+   G  ++A +M  +M E
Sbjct: 143  VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202

Query: 627  EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVT---------------- 670
            + +K D V    ++   +     +    +  H+   G+  +VVT                
Sbjct: 203  DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262

Query: 671  ---------------WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
                           W+++ISG  QN    E+L+ F  MQ   I+P+S  + S L  C  
Sbjct: 263  ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322

Query: 716  LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
            +G L+ G+ +H   ++  F  +  + T  IDMYSK G+L SA+ +F   +++ L  WN M
Sbjct: 323  IGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 776  IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
            I     +G G++A+ LF E+ ETG +PD  TF +LL+A  +SGLVEEG  +F  M   + 
Sbjct: 382  IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFK 441

Query: 836  IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
            I P  +HY C+VDLL ++G ++EA D + +M  +P   IW ALL  C  +  LE  E  +
Sbjct: 442  ITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIA 501

Query: 896  RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
              + +L+P +     L+ NL A + +W+ V ++R  M + G K +   S I+I    HVF
Sbjct: 502  DNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVF 561

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
              E   HP   EI  ++  L  EM+K+GY+P T  VY D++EE K + L  H+E+LAI +
Sbjct: 562  VMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAF 621

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL+ T     + +IKN RVC DCH A KY+S +  REI +RD  RFHHF++G CSC D W
Sbjct: 622  GLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 220/510 (43%), Gaps = 74/510 (14%)

Query: 226 SDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL 285
           S  ++ SL   Y   GD  +A        + S     + +    S  G     L V+  L
Sbjct: 41  SHTLISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRAL 100

Query: 286 HGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
                   S   T+ L  C +L     G  V       G+  DV +  +L++ Y +   +
Sbjct: 101 P-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAM 159

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
             A K+F  +    D + W+ ++   +   +  +AI+++R M+    K     ++ ++QA
Sbjct: 160 GDAVKVFVRMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQA 218

Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
           C        G  +HG++L+  +  ++     L+ MY++N  L++A RVF  M   N  SW
Sbjct: 219 CTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSW 278

Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
           ++MIS +   G  D A  LF  M +S IQPD                             
Sbjct: 279 SAMISGFAQNGQSDEALRLFRNMQASGIQPD----------------------------- 309

Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
                +G+ VS +L A + +  LK GR  HG+I+R   D++  +GT+ +DMY K   L +
Sbjct: 310 -----SGALVSALL-ACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLAS 362

Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
           AQ +F+ + +R+++ WN++I+     G   +A  +  +M E  ++PD  ++ SL+S  S 
Sbjct: 363 AQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSH 422

Query: 646 WGQSKEALV----IIHHMK----------------NSGIY-------------PNVVTWT 672
            G  +E  +    +++H K                 SG+              P V  W 
Sbjct: 423 SGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWV 482

Query: 673 SLISGSLQNENYR--ESL-KFFIQMQQEDI 699
           +L+SG L N+     ES+    +++Q +D+
Sbjct: 483 ALLSGCLNNKKLELGESIADNILELQPDDV 512



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 211/481 (43%), Gaps = 88/481 (18%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           R     +A+++FR +   +A+  S T    L ACA++G    G+ +      +  + ++ 
Sbjct: 86  RRGSPASALRVFRALP-PAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           VC+ L+ +Y+R   +  A +VF  M                                   
Sbjct: 145 VCSSLLHLYARWGAMGDAVKVFVRMP---------------------------------- 170

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
            + D +TW+ +++G  + G   + + + R M+  G + +   +  V+QA T  R ++ G 
Sbjct: 171 -RRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGA 229

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             HG++LR+G+  D+   TSL+DMY KN  L  A  VF  M +RN V+W+++ISG+   G
Sbjct: 230 SVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNG 289

Query: 613 LFVNAKKMLNQMEEEEIKPD---LVS-------------------------------WNS 638
               A ++   M+   I+PD   LVS                                 +
Sbjct: 290 QSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILGTA 349

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
            +  YS  G    A ++ + + +     +++ W ++I+    +   +++L  F +M +  
Sbjct: 350 AIDMYSKCGSLASAQMLFNMISDR----DLILWNAMIACCGAHGRGQDALTLFQEMNETG 405

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA---YVATGLIDMYSKSGNLK 755
           ++P+  T +SLL      GL++ GK      + +  I  A   YV   L+D+ ++SG ++
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVC--LVDLLARSGLVE 463

Query: 756 SAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAIL---LFHELLETGFQPDAITFTALL 811
            A ++     A  T+A W  ++ G     N K+  L   +   +LE   QPD +   AL+
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCL---NNKKLELGESIADNILE--LQPDDVGVLALV 518

Query: 812 A 812
           +
Sbjct: 519 S 519


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 233/742 (31%), Positives = 369/742 (49%), Gaps = 88/742 (11%)

Query: 369  MVKLRNEKW-ENAIKLFREMQFSSAKAISRTIVKMLQA-----CAKVGAFHEGKQIHGYV 422
            MV L  +KW E A KLF +M  S       + V +L +      A+     +G+++HG+V
Sbjct: 1    MVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHV 59

Query: 423  LKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
            + + L +  + + N L++MY++   +  A RVF  M                        
Sbjct: 60   ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFM------------------------ 95

Query: 482  WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
                       ++ D ++WN +++G   +G +   +   + M+     P   ++   L +
Sbjct: 96   -----------MEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSS 144

Query: 542  VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
               L+  K G++ HG  L+ G+D ++ V  +LM +Y +   L   +++F +M   + V+W
Sbjct: 145  CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 204

Query: 602  NSLISGY------------CFKGLFVNAKKMLNQME------------------------ 625
            NS+I               CF       +K LN++                         
Sbjct: 205  NSIIGALASSERSLPEAVACFLNALRAGQK-LNRITFSSVLSAVSSLSFGELGKQIHGLA 263

Query: 626  -EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENY 684
             +  I  +  + N+L++ Y   G+      I   M       + VTW S+ISG + NE  
Sbjct: 264  LKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSER---RDDVTWNSMISGYIHNELL 320

Query: 685  RESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGL 744
             ++L     M Q   + +S   +++L     +  L+ G E+H   ++     D  V + L
Sbjct: 321  AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSAL 380

Query: 745  IDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL-LETGFQPD 803
            +DMYSK G L  A   F     +   SWN MI G+A +G G+EA+ LF  + L+    PD
Sbjct: 381  VDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPD 440

Query: 804  AITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFI 863
             +TF  +L+AC ++GL+EEG+K+F+SMS  Y + P IEH+SCM DLLG+AG LD+  DFI
Sbjct: 441  HVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFI 500

Query: 864  RTMPFKPDATIWGALLGS-CRIHGH-LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
              MP KP+  IW  +LG+ CR +G   E  + A+  LF+LEP N+ NY L+ N+ A   R
Sbjct: 501  DKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGR 560

Query: 922  WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
            WED+ + R  M +  VK    +SW+ +   VH+F A    HP T  IY +L  L  +M+ 
Sbjct: 561  WEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRD 620

Query: 982  LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA-PIRVIKNTRVCSDCHT 1040
             GYVP T     D+++E K ++L  H+EKLA+ + L   +S   PIR++KN RVC DCH+
Sbjct: 621  AGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHS 680

Query: 1041 AAKYMSLVRGREIFLRDGARFH 1062
            A KY+S + GR+I LRD  R+ 
Sbjct: 681  AFKYISKIEGRQIILRDSNRYE 702



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 214/512 (41%), Gaps = 46/512 (8%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L   +  H  +I  G +     +   L+  Y + G    A + F     +    W+S + 
Sbjct: 49  LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108

Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
             +  G  + E +E +  +    ++  S  L   L  C  L    LG ++H   +K G D
Sbjct: 109 GLDQNGCFI-EAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 167

Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK-WENAIKLFR 385
            +V +  ALM  Y +   +    K+FS + +  D + WN II     +E+    A+  F 
Sbjct: 168 LNVSVSNALMTLYAETGYLNECRKIFSSMPE-HDQVSWNSIIGALASSERSLPEAVACFL 226

Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHE-GKQIHGYVLKSALESNLSVCNCLISMYSRN 444
                + + ++R     + +     +F E GKQIHG  LK  +    +  N LI+ Y + 
Sbjct: 227 N-ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKC 285

Query: 445 NKLELATRVFDSMKD-HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
            +++   ++F  M +  +  +WNSMIS Y                            N L
Sbjct: 286 GEMDGCEKIFSRMSERRDDVTWNSMISGY--------------------------IHNEL 319

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           L+           L L+  M   G R +    + VL A   +  L+ G E H   +R  L
Sbjct: 320 LA---------KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 370

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           + D+ VG++L+DMY K   L  A   F+ M  RN  +WNS+ISGY   G    A K+   
Sbjct: 371 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFAN 430

Query: 624 ME-EEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQN 681
           M+ + +  PD V++  ++S  S  G  +E       M +S G+ P +  + S ++  L  
Sbjct: 431 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF-SCMADLLGR 489

Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
               + L+ FI   +  +KPN     ++L  C
Sbjct: 490 AGELDKLEDFI--DKMPVKPNVLIWRTVLGAC 519



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 219/518 (42%), Gaps = 80/518 (15%)

Query: 313 GVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           G EVH  +I  G  DF V +   L+N Y KC  +  A ++F  + + +D + WN +I   
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMME-KDSVSWNSMITGL 110

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
            +N  +  A++ ++ M+       S T++  L +CA +     G+QIHG  LK  ++ N+
Sbjct: 111 DQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 170

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSS 491
           SV N L+++Y+    L    ++F SM +H+  SWNS+I +                 +S 
Sbjct: 171 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA---------------SSE 215

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
           R  P+ +   C L+              LR  Q L    N  + S VL AV+ L   + G
Sbjct: 216 RSLPEAVA--CFLNA-------------LRAGQKL----NRITFSSVLSAVSSLSFGELG 256

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM-KNRNIVAWNSLISGYCF 610
           ++ HG  L+  +  +     +L+  Y K   +   +++F  M + R+ V WNS+ISGY  
Sbjct: 257 KQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIH 316

Query: 611 KGL-----------------------------FVNAKKMLNQMEEEE------IKPDLVS 635
             L                             F +   +   ME         ++ D+V 
Sbjct: 317 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 376

Query: 636 WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ 695
            ++LV  YS  G+   AL   + M     Y    +W S+ISG  ++    E+LK F  M+
Sbjct: 377 GSALVDMYSKCGRLDYALRFFNTMPVRNSY----SWNSMISGYARHGQGEEALKLFANMK 432

Query: 696 QE-DIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
            +    P+  T   +L  C   GLL+ G K    +    G        + + D+  ++G 
Sbjct: 433 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGE 492

Query: 754 LKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAIL 790
           L    +   K   K  +  W   ++G     NG++A L
Sbjct: 493 LDKLEDFIDKMPVKPNVLIWR-TVLGACCRANGRKAEL 529



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 176/396 (44%), Gaps = 22/396 (5%)

Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
           LG ++H   +K     +   + AL+  YGKC +++   K+FS +S+  DD+ WN +I   
Sbjct: 255 LGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGY 314

Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
           + NE    A+ L   M  +  +  S     +L A A V     G ++H   +++ LES++
Sbjct: 315 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 374

Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-S 490
            V + L+ MYS+  +L+ A R F++M   N  SWNSMIS Y   G  + A  LF  M   
Sbjct: 375 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLD 434

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRP---NGSSVSVVLQAVTELR 546
            +  PD +T+  +LS     G  +        M  S G  P   + S ++ +L    EL 
Sbjct: 435 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELD 494

Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
            L+   +    +  N L +   +G        K +  + A E+   ++  N V +  L +
Sbjct: 495 KLEDFIDKMP-VKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 553

Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDL-VSWNSLVSGYSIW---GQSKEALVIIH----- 657
            Y   G + +  K   +M++ ++K +   SW ++  G  ++    +S     +I+     
Sbjct: 554 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKKLKE 613

Query: 658 ---HMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
               M+++G  P     T      L+ EN  E L +
Sbjct: 614 LNRKMRDAGYVPQ----TGFALYDLEQENKEEILSY 645


>gi|30103011|gb|AAP21424.1| putative pentatricopeptide repeat containing protein [Oryza sativa
            Japonica Group]
 gi|222626012|gb|EEE60144.1| hypothetical protein OsJ_13038 [Oryza sativa Japonica Group]
 gi|374087691|gb|AEY82646.1| chloroplast ALBL [Oryza sativa Japonica Group]
          Length = 859

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 228/720 (31%), Positives = 366/720 (50%), Gaps = 54/720 (7%)

Query: 399  IVKMLQACAKVGAFHEGKQIHGYVLKSALES---NLSVCNCLISMYSRNNKLELATRVFD 455
            I ++LQACA       G+ +H   ++        ++ V N ++ MY++   L  A +VFD
Sbjct: 151  ITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLGWARKVFD 210

Query: 456  SMKDHNLSSWNSMI-----------------------------------SSYTGLGYVDV 480
             M   +L +WNSMI                                   SSY   G +DV
Sbjct: 211  KMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDV 270

Query: 481  AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
            A  L  +M  S + PD++TW  L+SG          L     M+  G  PNG S++  + 
Sbjct: 271  AMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAIS 330

Query: 541  AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA 600
            A   L+LL   +E H + ++ G   ++  G SL+DMY K   +  A  +F  + +++I +
Sbjct: 331  ACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGIPDKDIFS 390

Query: 601  WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
            WNS+ISGY   G    A ++  +ME   ++ ++++WN+++SGY   G  + A  +   M+
Sbjct: 391  WNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMME 450

Query: 661  NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
            + G+  +  TW  LI+GS+ N  Y  +++ F QMQ    +P+  T+ S++     L    
Sbjct: 451  SHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPAFTNLVASW 510

Query: 721  NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
              +EIH     +    D  +A  LI+ YSKSGNL SA  VF   +++ + SWNC+I+   
Sbjct: 511  KVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSRNIISWNCIILAHV 570

Query: 781  IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTI 840
            ++G+  EA+ LF ++ + G  PD  T   ++ A   +G V EG + F +M+ DYNI P +
Sbjct: 571  LHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPEL 630

Query: 841  EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK 900
            +HY+ MVDLLG++G L EA++ I  MP  P++T+W   L +  +HG++  A +A+R L  
Sbjct: 631  DHYAAMVDLLGRSGRLKEAYELIDEMPLIPNSTVWDTFLTAAVMHGNVRLAHLAARELSA 690

Query: 901  LEPCNSANYNLMMNLLAMSNRWEDV-ERLR----HSMDEVGVKSVLVWSWIQIDQIVHVF 955
            ++P +     L  +L  ++ +  DV E +      ++DEV   S      I+I   V+VF
Sbjct: 691  IDPGDPRVQRLGSSLQDLTGKTVDVPEEMTPNKGRNLDEVESCS------IEIRNKVYVF 744

Query: 956  SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
            S     +     +   +  L S M K+G+      +     EEEK +V+  H EKLAI +
Sbjct: 745  S-----NGDNVGLEDTVAELKSMMFKMGHSMLDIGIGTLDVEEEKEEVVGVHCEKLAIAF 799

Query: 1016 GLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
            GL  +     IR+IK  R+C+ CHT AK +S   GR I ++D    H F +G+CSC D W
Sbjct: 800  GLSNSPQFKNIRIIKTARMCNHCHTFAKLVSEKYGRHILIKDPKCLHKFEDGKCSCEDYW 859



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 256/527 (48%), Gaps = 28/527 (5%)

Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
           +I+ ++  G +  A  +F+ M     + D++ W+ ++  +   G Y +VL L   M   G
Sbjct: 88  LITVHSCAGRLGDAREVFDGMG----RRDLLAWSAMIGAYAIRGMYSDVLALAVTMVEEG 143

Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL---DYDLYVGTSLMDMYVKNDCLQ 584
             P+   ++ +LQA      L+ GR  H   +R G      D+ VG S++ MY K   L 
Sbjct: 144 VLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLG 203

Query: 585 NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYS 644
            A++VFD M  R++  WNS+I GYC    +  A+ +L+ M +E  +P +V+WN+L+S Y+
Sbjct: 204 WARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYA 263

Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
            +G    A+ ++  M+ SG+ P+VVTWTSL+SG +  +   E+L+ FI+M+   ++PN  
Sbjct: 264 RFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGM 323

Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
           +++  +  C  L LL   KE+H   +K G + +      L+DMY+K G + +A  +F   
Sbjct: 324 SIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGI 383

Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
            +K + SWN MI G+A  G   +A  LF ++   G + + IT+  +++    +G  E  +
Sbjct: 384 PDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAF 443

Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPF---KPD-ATIWGALLG 880
           + F  M + + +      ++ ++      GY D A    R M     +PD  TI   +  
Sbjct: 444 ELFQMMES-HGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPA 502

Query: 881 SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
              +    +  EI +         +    N ++N  + S        +    D    +++
Sbjct: 503 FTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAV---FDMHSSRNI 559

Query: 941 LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
           + W+ I +  ++H     G+P+        E   L  +MK+ G VPD
Sbjct: 560 ISWNCIILAHVLH-----GSPN--------EALDLFCQMKQEGVVPD 593



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 195/415 (46%), Gaps = 42/415 (10%)

Query: 335 LMNFYGKCRDVESANKLFSEVSD---LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
           L++ Y +  D++ A +L  ++ +     D + W  ++   +  ++ + A++ F  M+ + 
Sbjct: 258 LISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAG 317

Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
            +    +I   + ACA +   ++ K++H + +K    +N+   N L+ MY++  ++  A 
Sbjct: 318 VEPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAW 377

Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
           R+F  + D ++ SWNSMIS Y   GY   A+ LF KM +  ++ ++ITWN ++SG+  +G
Sbjct: 378 RIFSGIPDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNG 437

Query: 512 S-----------------------------------YQNVLTLLRGMQSLGFRPNGSSVS 536
                                               Y   + + R MQ+L  RP+  ++ 
Sbjct: 438 DDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITIL 497

Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
            ++ A T L      RE H  I  + L+ D  +  +L++ Y K+  L +A  VFD   +R
Sbjct: 498 SIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSR 557

Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
           NI++WN +I  +   G    A  +  QM++E + PD  +  +++  Y + G+  E     
Sbjct: 558 NIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTF 617

Query: 657 HHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
            +M N   I P +  + +++    ++   +E+ +   +M    + PNST   + L
Sbjct: 618 FNMANDYNITPELDHYAAMVDLLGRSGRLKEAYELIDEMP---LIPNSTVWDTFL 669



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 39/322 (12%)

Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFS 255
           C ++     + L+  K  H+  IK+G + N+     SL+  Y + G+  +A + F     
Sbjct: 327 CAISACASLKLLNQAKELHSHAIKVGSV-NNVLSGNSLVDMYAKCGEIVAAWRIFSGIPD 385

Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
           +    W+S +  Y    G   +  E++ ++   GV  R  ++T            W    
Sbjct: 386 KDIFSWNSMISGYAQ-AGYCGKAYELFCKMENYGV--RRNVIT------------W--NT 428

Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
           + +  I+ G D        +M  +G  RD  +                WN +I   + N 
Sbjct: 429 MISGYIRNGDDERAFELFQMMESHGVKRDTAT----------------WNILIAGSVHNG 472

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
            ++ AI++FR+MQ    +    TI+ ++ A   + A  + ++IH  +    LE +  + N
Sbjct: 473 YYDRAIRIFRQMQALLRRPDYITILSIIPAFTNLVASWKVREIHACIFHHNLELDGKIAN 532

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
            LI+ YS++  L  A  VFD     N+ SWN +I ++   G  + A  LF +M    + P
Sbjct: 533 ALINAYSKSGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVP 592

Query: 496 DIITWNCL-----LSGHFTHGS 512
           D  T   +     L+G  + GS
Sbjct: 593 DHTTLVTVIKAYGLTGKVSEGS 614



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/380 (19%), Positives = 147/380 (38%), Gaps = 75/380 (19%)

Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
           T L+ ++     L +A+EVFD M  R+++AW+++I  Y  +G++ +   +   M EE + 
Sbjct: 86  TKLITVHSCAGRLGDAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVTMVEEGVL 145

Query: 631 PDLV-------------------SWNSLVSGYSIWGQSKEAL----VIIHHMK------- 660
           PD                     + +S+       G+ K+      V++ + K       
Sbjct: 146 PDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLGWA 205

Query: 661 ----NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
               +  +  ++ TW S+I G  ++  + E+      M+QE  +P   T ++L+ +    
Sbjct: 206 RKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARF 265

Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
           G                   D  VA  L+    +SG                + +W  ++
Sbjct: 266 G-------------------DLDVAMELLGQMEESG------------VAPDVVTWTSLV 294

Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
            GF       EA+  F  +   G +P+ ++    ++AC +  L+ +  K   S +     
Sbjct: 295 SGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQA-KELHSHAIKVGS 353

Query: 837 IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
           +  +   + +VD+  K G +  AW     +P K D   W +++      G+   A     
Sbjct: 354 VNNVLSGNSLVDMYAKCGEIVAAWRIFSGIPDK-DIFSWNSMISGYAQAGYCGKA----Y 408

Query: 897 RLFKLEPCNSANYNLMMNLL 916
            LF    C   NY +  N++
Sbjct: 409 ELF----CKMENYGVRRNVI 424



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 12/258 (4%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFS----RSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
           ++I  Y+  GD   A + F +  S    R  A W+  +       G     + ++ ++  
Sbjct: 428 TMISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAG-SVHNGYYDRAIRIFRQM-- 484

Query: 288 KGVIFRSRILTI--ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDV 345
           + ++ R   +TI  I+   T L+A W   E+HA +     + D  +  AL+N Y K  ++
Sbjct: 485 QALLRRPDYITILSIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNL 544

Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
            SA  +F ++    + + WN II+  + +     A+ LF +M+         T+V +++A
Sbjct: 545 ASACAVF-DMHSSRNIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKA 603

Query: 406 CAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLS 463
               G   EG Q    +     +   L     ++ +  R+ +L+ A  + D M    N +
Sbjct: 604 YGLTGKVSEGSQTFFNMANDYNITPELDHYAAMVDLLGRSGRLKEAYELIDEMPLIPNST 663

Query: 464 SWNSMISSYTGLGYVDVA 481
            W++ +++    G V +A
Sbjct: 664 VWDTFLTAAVMHGNVRLA 681


>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 630

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 207/607 (34%), Positives = 321/607 (52%), Gaps = 49/607 (8%)

Query: 471  SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
            +Y   G +  + +LF++     I PD+  +   ++    +G       L   + S    P
Sbjct: 71   AYASHGKIRHSLALFHQT----IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINP 126

Query: 531  NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
            N  + S +L++ +     K G+  H ++L+ GL  D YV T L+D+Y K   + +AQ+VF
Sbjct: 127  NEFTFSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVF 182

Query: 591  DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
            D M  R++V+  ++I+ Y  +G    A+ + ++M E +I                     
Sbjct: 183  DRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDI--------------------- 221

Query: 651  EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSL 709
                              V+W  +I G  Q+    ++L  F ++  +   KP+  T+ + 
Sbjct: 222  ------------------VSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAA 263

Query: 710  LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
            L  C  +G L+ G+ IH     +    +  V T LIDMYSK G+L+ A  VF  +  K +
Sbjct: 264  LSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDI 323

Query: 770  ASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
             +WN MI G+A++G  ++A+ LF E+   TG QP  ITF   L AC ++GLV EG + F+
Sbjct: 324  VAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFE 383

Query: 829  SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
            SM  +Y I P IEHY C+V LLG+AG L  A++ I+ M  + D+ +W ++LGSC++HG  
Sbjct: 384  SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEF 443

Query: 889  EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
               +  +  L      NS  Y L+ N+ A+   +E V ++R+ M E G+      S I+I
Sbjct: 444  MLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEI 503

Query: 949  DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
            D  VH F A    H  + EIY  L  +   +K  GYVP+T  V  D++E EK + L  H+
Sbjct: 504  DNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHS 563

Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
            E+LAI YGL+ TK  +P+++ KN RVCSDCHT  K +S + GR+I +RD  RFHHF +G 
Sbjct: 564  ERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGS 623

Query: 1069 CSCNDCW 1075
            CSC+D W
Sbjct: 624  CSCDDFW 630



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 205/420 (48%), Gaps = 22/420 (5%)

Query: 314 VEVHASLIKRGFDFDVHLKCALMNF-----YGKCRDVESANKLFSEVSDLEDDLLWNEII 368
           +++HA++++   +  +H +  ++N      Y     +  +  LF +  D  D  L+   I
Sbjct: 44  LQIHAAILRH--NLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID-PDLFLFTAAI 100

Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
                N   + A  L+ ++  S       T   +L++C+       GK IH +VLK  L 
Sbjct: 101 NTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCST----KSGKLIHTHVLKFGLG 156

Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            +  V   L+ +Y++   +  A +VFD M + +L S  +MI+ Y   G V+ A +LF++M
Sbjct: 157 LDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRM 216

Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRL 547
                + DI++WN ++ G+  HG   + L L + + + G  +P+  +V   L A +++  
Sbjct: 217 ----CERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGA 272

Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
           L+ GR  H ++  + +  ++ V T+L+DMY K   L+ A  VF++   ++IVAWN++I+G
Sbjct: 273 LETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITG 332

Query: 608 YCFKGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIY 665
           Y   G   +A ++ ++M+    ++P  +++   +   +  G   E + I   M +  GI 
Sbjct: 333 YAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIK 392

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P +  +  L+S   +    + + +    M  E    +S   SS+L +C   G    GKEI
Sbjct: 393 PKIEHYGCLVSLLGRAGQLKRAYEIIKNMNME---ADSVLWSSVLGSCKLHGEFMLGKEI 449



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 37/264 (14%)

Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD-- 357
           ILK C+       G  +H  ++K G   D ++   L++ Y K  DV SA K+F  + +  
Sbjct: 134 ILKSCSTKS----GKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERS 189

Query: 358 ---------------------------LEDDLL-WNEIIMVKLRNEKWENAIKLFREM-Q 388
                                       E D++ WN +I    ++    +A+ LF+++  
Sbjct: 190 LVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLA 249

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
               K    T+V  L AC+++GA   G+ IH +V  S +  N+ VC  LI MYS+   LE
Sbjct: 250 DGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLE 309

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS-SRIQPDIITWNCLLSGH 507
            A  VF+     ++ +WN+MI+ Y   GY   A  LF++M   + +QP  IT+   L   
Sbjct: 310 EAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQAC 369

Query: 508 FTHGSYQNVLTLLRGM-QSLGFRP 530
              G     + +   M Q  G +P
Sbjct: 370 AHAGLVNEGIQIFESMGQEYGIKP 393



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 20/251 (7%)

Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
           ++I  Y + G+  +A   F     R    W+  ++ Y   G     L+ ++ +L   G  
Sbjct: 195 AMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALM-LFQKLLADGKP 253

Query: 292 FRSRILTII-LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
               I  +  L  C+++ A   G  +H  +       +V +  AL++ Y KC  +E A  
Sbjct: 254 KPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVL 313

Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ-FSSAKAISRTIVKMLQACAKV 409
           +F++ +  +D + WN +I     +   ++A++LF EMQ  +  +    T +  LQACA  
Sbjct: 314 VFND-TPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHA 372

Query: 410 GAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
           G  +EG QI       Y +K  +E       CL+S+  R  +L+   R ++ +K+ N+ +
Sbjct: 373 GLVNEGIQIFESMGQEYGIKPKIEH----YGCLVSLLGRAGQLK---RAYEIIKNMNMEA 425

Query: 465 ----WNSMISS 471
               W+S++ S
Sbjct: 426 DSVLWSSVLGS 436


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Brachypodium distachyon]
          Length = 849

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 244/805 (30%), Positives = 404/805 (50%), Gaps = 79/805 (9%)

Query: 313  GVEVHASLIKRGF-DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
            G +VHA   K G  D D  +  +L++ YG+C  V+ A K+F  ++   + + WN + M  
Sbjct: 82   GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAG-RNLVSWNAL-MAA 139

Query: 372  LRNEKWENAIKLFR---EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
            + + +    ++LFR   E    +A     T+V +L  CA +     G+ +HG  +KS  +
Sbjct: 140  VADPR--RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWD 197

Query: 429  SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
            +   V N L+ MY++  ++  A   F              + +  G G            
Sbjct: 198  AAPRVSNVLVDMYAKCGEMADAECAF--------------LEAPPGAGR----------- 232

Query: 489  NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ--SLGFRPNGSSVSVVLQAVTELR 546
                   ++++WN +L G+  +G       LLR MQ    G   +  ++  VL   + L 
Sbjct: 233  -------NVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLP 285

Query: 547  LLKYGRESHGYILRNGLDY--DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
             L   RE H +++R GL    D+ V  +L+  Y +  CL +A  VFD + ++ + +WN+L
Sbjct: 286  ELAKLRELHAFVVRRGLHLTGDM-VPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNAL 344

Query: 605  ISGYCFKGLFVNAKKMLNQMEEE-EIKPDLVSWNSLVSG-----YSIWGQSKEALVIIHH 658
            I  +   G    A ++  +M      KPD  S  SL+       + + G++    ++ + 
Sbjct: 345  IGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNG 404

Query: 659  M-KNSGIYPNV-------------------------VTWTSLISGSLQNENYRESLKFFI 692
            + K+S I  ++                         V+W ++I+G  QN    ESL+ F 
Sbjct: 405  LEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFR 464

Query: 693  QMQQEDIK--PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
            +MQ +     P+    +S L  C  L  ++ GKE+HC  LK    +D+++++ +IDMYSK
Sbjct: 465  EMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSK 524

Query: 751  SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
             G++  AR  F +   K   SW  MI G+A+ G GKEA+ L+ ++   G +PD  T+  L
Sbjct: 525  CGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGL 584

Query: 811  LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
            L AC ++G++E+G  +F  M     I   +EHY+C++ +L +AG   +A   +  MP +P
Sbjct: 585  LMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEP 644

Query: 871  DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
            DA I  ++L +C +HG +E  +  + +L +LEP  + +Y L  N+ A S +W+++ ++R 
Sbjct: 645  DAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRK 704

Query: 931  SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
             + + GV      SWI I   V+ F A     P   ++    Y L  +++  GY PDT  
Sbjct: 705  MLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTV 764

Query: 991  VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
            +  +++EEEK + L  H+EK AI +GL++T     +RV KN R+C DCH AAK +S V  
Sbjct: 765  MLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVAD 824

Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
            REI +RD  RFHHFR+G CSC D W
Sbjct: 825  REIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 156/660 (23%), Positives = 278/660 (42%), Gaps = 116/660 (17%)

Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           HA   K+G + + D  V  SL+  Y   G    A K F     R+   W++ +       
Sbjct: 86  HAVAAKLG-LADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPR 144

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
             ++   +   +L G      + ++T+ L +C  L     G  VH   +K G+D    + 
Sbjct: 145 RGLELFRDCLEDLGGTAAPDEATLVTV-LPMCAALAWPETGRAVHGLAVKSGWDAAPRVS 203

Query: 333 CALMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
             L++ Y KC ++  A   F E       + + WN ++    RN +   A  L REMQ  
Sbjct: 204 NVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQME 263

Query: 391 --SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE-SNLSVCNCLISMYSRNNKL 447
                A   T++ +L  C+ +    + +++H +V++  L  +   V N LI+ Y R   L
Sbjct: 264 ERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCL 323

Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
             A RVFD +    +SSWN++I ++   G    A  LF +M +                 
Sbjct: 324 LHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTN----------------- 366

Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
                            + G +P+  S+  +L A   L+ L +G+ +HG+ILRNGL+ D 
Sbjct: 367 -----------------ACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDS 409

Query: 568 YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEE 627
           ++  SL+ +Y++      A+ +FD ++ ++ V+WN++I+GY   GL   + ++  +M+ +
Sbjct: 410 FIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSK 469

Query: 628 E---------------------------------IKPDLVS----WNSLVSGYSIWGQSK 650
           +                                 +K DL       +S++  YS  G   
Sbjct: 470 KGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVD 529

Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
           +A V    +K      + V+WT +I+G   N   +E++  + +M +E ++P+  T   LL
Sbjct: 530 DARVFFDRLKAK----DAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLL 585

Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
             CG  G+L++G     LC                         +  R + +  A   L 
Sbjct: 586 MACGHAGMLEDG-----LCF-----------------------FQEMRNLPKIEAK--LE 615

Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
            + C+I   +  G   +A+ L   + E   +PDA   +++L+AC   G VE G K  D +
Sbjct: 616 HYACVIGMLSRAGRFADAVALMEVMPE---EPDAKILSSVLSACHMHGEVELGKKVADKL 672



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 241/566 (42%), Gaps = 84/566 (14%)

Query: 364 WNEIIMVKLRNEKWENAIKLF-REMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGY 421
           WN ++    R  +  +A+ +  R +  S   A  R T+   L++C       +G+Q+H  
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAV 88

Query: 422 VLKSAL-ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
             K  L + +  V N L+SMY R  +++ A +VF+ M   NL SWN+++++         
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA------- 141

Query: 481 AWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQ 540
                      R   ++               +++ L  L G  +    P+ +++  VL 
Sbjct: 142 ---------DPRRGLEL---------------FRDCLEDLGGTAA----PDEATLVTVLP 173

Query: 541 AVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF---DNMKNRN 597
               L   + GR  HG  +++G D    V   L+DMY K   + +A+  F        RN
Sbjct: 174 MCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRN 233

Query: 598 IVAWNSLISGYCFKGLFVNAKKMLN--QMEEEEIKPDLVSWNSLV---SGYSIWGQSKE- 651
           +V+WN ++ GY   G    A  +L   QMEE  +  D ++  S++   SG     + +E 
Sbjct: 234 VVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLREL 293

Query: 652 -ALVIIHHMKNSG-IYPN--------------------------VVTWTSLISGSLQNEN 683
            A V+   +  +G + PN                          V +W +LI    QN  
Sbjct: 294 HAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGE 353

Query: 684 YRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
              +++ F +M      KP+  ++ SLL  CG L  L +GK  H   L+NG  KD+++  
Sbjct: 354 ASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRV 413

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL--ETGF 800
            L+ +Y + G    AR +F     K   SWN MI G++  G   E++ LF E+   + G 
Sbjct: 414 SLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGH 473

Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
            P  +  T+ L AC     V  G K     +   ++       S ++D+  K G +D+A 
Sbjct: 474 WPSLLAATSALVACSELPAVRLG-KEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDAR 532

Query: 861 DFIRTMPFKPDATIWGALLGSCRIHG 886
            F   +  K DA  W  ++    ++G
Sbjct: 533 VFFDRLKAK-DAVSWTVMITGYAVNG 557



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 9/325 (2%)

Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
           L+ ++  HA +++ G     D +  +LI  Y   G    A + F    S+  + W++ + 
Sbjct: 287 LAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIG 346

Query: 267 DYESFGGEVQELLEVWGELH---GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +    GE    +E++ E+    G+   + S  +  +L  C  L     G   H  +++ 
Sbjct: 347 AHAQ-NGEASAAIELFREMTNACGQKPDWFS--IGSLLLACGNLKHLLHGKAAHGFILRN 403

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G + D  ++ +L++ Y +C     A  LF  V + +D++ WN +I    +N     +++L
Sbjct: 404 GLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEE-KDEVSWNTMIAGYSQNGLPGESLQL 462

Query: 384 FREMQFSSAKAISRTIV--KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
           FREMQ          +     L AC+++ A   GK++H + LK+ L  +  + + +I MY
Sbjct: 463 FREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMY 522

Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
           S+   ++ A   FD +K  +  SW  MI+ Y   G    A  L++KM    ++PD  T+ 
Sbjct: 523 SKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYL 582

Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSL 526
            LL      G  ++ L   + M++L
Sbjct: 583 GLLMACGHAGMLEDGLCFFQEMRNL 607



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 18/268 (6%)

Query: 671 WTSLISGSLQNENYRESLKFFIQM--QQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           W  L++   +   + ++L    ++    + + P+  T+   L++C G     +G+++H +
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAV 88

Query: 729 CLKNGFIK-DAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
             K G    D +V   L+ MY + G +  A +VF   A + L SWN ++   A   + + 
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA---DPRR 145

Query: 788 AILLFHELLET---GFQPDAITFTALLAACKNSGLVEEGWKYFD-SMSTDYNIIPTIEHY 843
            + LF + LE       PD  T   +L  C      E G      ++ + ++  P + + 
Sbjct: 146 GLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNV 205

Query: 844 SCMVDLLGKAGYL-DEAWDFIRTMPFKPDATI-WGALLGSCRIHGHLEYAEIASRRLFKL 901
             +VD+  K G + D    F+   P      + W  +LG    +G    A    R +   
Sbjct: 206 --LVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQME 263

Query: 902 EPCNSANYNLMMNLLAMSNRWEDVERLR 929
           E    A+   M+++L + +   ++ +LR
Sbjct: 264 ERGVPADEITMLSVLPVCSGLPELAKLR 291


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 211/735 (28%), Positives = 358/735 (48%), Gaps = 89/735 (12%)

Query: 389  FSSAKAISRTI-VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
             +  KA+   + V +L  C + G+    + +HG++ K+   +++ V   L++ Y R +  
Sbjct: 70   LTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAA 129

Query: 448  ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
              A R+FD M + N                                   ++TW  L++G+
Sbjct: 130  RDARRLFDGMPERN-----------------------------------VVTWTALVTGY 154

Query: 508  FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL 567
              +      L +   M  +G  P+  ++   L A      +  G++ HGY ++ G +   
Sbjct: 155  TLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESIT 214

Query: 568  YVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG-------------------- 607
             +G SL  +Y K   L +A   F  +  +N++ W ++IS                     
Sbjct: 215  SMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLM 274

Query: 608  ---------------YCFKGLFVNAKKMLNQME-EEEIKPDLVSWNSLVSGYSIWGQSKE 651
                            C   L +N  K +     +   + +L   NS +  Y   G++ E
Sbjct: 275  DGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDE 334

Query: 652  ALVIIHHMKNSGIYPNVVTWTSLISGSLQ-----------NENYRESLKFFIQMQQEDIK 700
            A+ +   M+++ I    +TW ++ISG  Q                ++L  F  +++  +K
Sbjct: 335  AMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMK 390

Query: 701  PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
            P+  T SS+L  C  +  L+ G++IH   +K+GF+ D  V + L++MY+K G ++ A + 
Sbjct: 391  PDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKA 450

Query: 761  FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
            F +   +T  +W  MI G++ +G  +EAI LF E+   G +P+ ITF +LL+AC  +GLV
Sbjct: 451  FLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLV 510

Query: 821  EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
            EE   YFD M  +Y I P ++HY CM+D+  + G +++A+ FI+   F+P+  IW +L+ 
Sbjct: 511  EEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVA 570

Query: 881  SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
             CR HG++E A  A+ +L +L+P     Y L++N+   + RW+DV R+R  M +  V  +
Sbjct: 571  GCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGIL 630

Query: 941  LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
               SWI I   V+ F A    HP   E+Y  L +L+ + K +GY P       D +++EK
Sbjct: 631  RDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEK 690

Query: 1001 GKV--LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
                 L  H+E+LA+  GL++T   A +RV KN  +C DCH++ K  SL+  REI +RD 
Sbjct: 691  PAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDS 750

Query: 1059 ARFHHFREGECSCND 1073
             R H F++G CSC D
Sbjct: 751  KRLHKFKDGRCSCGD 765



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 138/583 (23%), Positives = 244/583 (41%), Gaps = 87/583 (14%)

Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
           +VQE + +  E  GK V  +S +   +L  C +  +      VH  + K G   D+ +  
Sbjct: 62  DVQEAMTMLTE--GKAV--QSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVAT 117

Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
           +L+N Y +C     A +LF  + +  + + W  ++     N +    +++F EM      
Sbjct: 118 SLVNAYMRCSAARDARRLFDGMPE-RNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRY 176

Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
               T+   L AC        GKQ+HGY +K   ES  S+ N L S+Y++   L+ A R 
Sbjct: 177 PSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRA 236

Query: 454 FDSMKDHNLSSWNSMISSYT-GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
           F  + + N+ +W +MIS+       V++  SLF  M    + P                 
Sbjct: 237 FWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMP----------------- 279

Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
             N  TL   M   G R +                L  G++   +  + G + +L V  S
Sbjct: 280 --NEFTLTSVMSLCGTRLD----------------LNLGKQVQAFSFKIGCETNLPVKNS 321

Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC-----------FKGLFVNAKKML 621
            M +Y++      A  +F+ M++ +I+ WN++ISGY             +     A  + 
Sbjct: 322 TMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIF 381

Query: 622 NQMEEEEIKPDLVSWNSLVS----------GYSIWGQSKEALVIIHHMKNSGIY------ 665
             ++   +KPDL +++S++S          G  I  Q+ ++  +   + NS +       
Sbjct: 382 RDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC 441

Query: 666 ---------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
                             VTWTS+ISG  Q+   +E+++ F +M+   ++PN  T  SLL
Sbjct: 442 GCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLL 501

Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSAREVFRKSA-NKT 768
             C   GL++  +    +  K   I+      G +IDM+ + G ++ A    +++     
Sbjct: 502 SACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPN 561

Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
            A W+ ++ G   +GN + A     +LLE   +P  I    LL
Sbjct: 562 EAIWSSLVAGCRSHGNMELAFYAADKLLE--LKPKGIETYILL 602



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 153/322 (47%), Gaps = 28/322 (8%)

Query: 206 CLSSV-----KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD 260
           CL+S      K  H   IK G   +   M  SL   Y + G   SA +AF+    ++   
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGA-ESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVIT 247

Query: 261 WSSFL----EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEV 316
           W++ +    ED E     V+  + ++ ++   GV+     LT ++ LC   +   LG +V
Sbjct: 248 WTTMISACAEDEEC----VELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV 303

Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM------- 369
            A   K G + ++ +K + M  Y +  + + A +LF ++ D    + WN +I        
Sbjct: 304 QAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMED-ASIITWNAMISGYAQIMD 362

Query: 370 -----VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLK 424
                ++ R+  ++ A+ +FR+++ S  K    T   +L  C+ + A  +G+QIH   +K
Sbjct: 363 SAKDDLQARSRGFQ-ALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 421

Query: 425 SALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSL 484
           S   S++ V + L++MY++   ++ A + F  M      +W SMIS Y+  G    A  L
Sbjct: 422 SGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQL 481

Query: 485 FNKMNSSRIQPDIITWNCLLSG 506
           F +M  + ++P+ IT+  LLS 
Sbjct: 482 FEEMRLAGVRPNEITFVSLLSA 503


>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g55740, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
 gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 830

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 223/779 (28%), Positives = 401/779 (51%), Gaps = 41/779 (5%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSS 263
           R LS+ K  HA+++K G  +  ++ +++ L+  Y +      A   F     R+   W++
Sbjct: 84  RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143

Query: 264 FLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKR 323
            +   +   G  +  L  + E+    +   + ++  + K C  L     G  VH  ++K 
Sbjct: 144 II-GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS 202

Query: 324 GFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL 383
           G +  V +  +L + YGKC  ++ A+K+F E+ D  + + WN +++  ++N K E AI+L
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD-RNAVAWNALMVGYVQNGKNEEAIRL 261

Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
           F +M+    +    T+   L A A +G   EGKQ H   + + +E               
Sbjct: 262 FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME--------------- 306

Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
                          D+ L +  S+++ Y  +G ++ A  +F++M     + D++TWN +
Sbjct: 307 --------------LDNILGT--SLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLI 346

Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
           +SG+   G  ++ + + + M+    + +  +++ ++ A      LK G+E   Y +R+  
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406

Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
           + D+ + +++MDMY K   + +A++VFD+   ++++ WN+L++ Y   GL   A ++   
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466

Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNEN 683
           M+ E + P++++WN ++      GQ  EA  +   M++SGI PN+++WT++++G +QN  
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN-GFIKDAYVAT 742
             E++ F  +MQ+  ++PN+ +++  L  C  L  L  G+ IH   ++N        + T
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586

Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
            L+DMY+K G++  A +VF       L   N MI  +A+YGN KEAI L+  L   G +P
Sbjct: 587 SLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKP 646

Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
           D IT T +L+AC ++G + +  + F  + +  ++ P +EHY  MVDLL  AG  ++A   
Sbjct: 647 DNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRL 706

Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
           I  MPFKPDA +  +L+ SC      E  +  SR+L + EP NS NY  + N  A+   W
Sbjct: 707 IEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSW 766

Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQI--DQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
           ++V ++R  M   G+K     SWIQI  ++ VHVF A    H    EI   L  L+ +M
Sbjct: 767 DEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/562 (25%), Positives = 264/562 (46%), Gaps = 82/562 (14%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA--LESN 430
           +N + + A+ L  EM F + +       ++LQ C        GKQIH  +LK+      N
Sbjct: 47  KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106

Query: 431 LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS 490
             +   L+  Y++ + LE+A  +F  ++  N+ SW ++I     +G  + A   F +M  
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166

Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKY 550
           + I PD                  N +            PN      V +A   L+  ++
Sbjct: 167 NEIFPD------------------NFVV-----------PN------VCKACGALKWSRF 191

Query: 551 GRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCF 610
           GR  HGY++++GL+  ++V +SL DMY K   L +A +VFD + +RN VAWN+L+ GY  
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251

Query: 611 KGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKE-----ALVIIHHMKNSGIY 665
            G    A ++ + M ++ ++P  V+ ++ +S  +  G  +E     A+ I++ M+   I 
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311

Query: 666 --------------------------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
                                      +VVTW  +ISG +Q     +++     M+ E +
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371

Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
           K +  T+++L+        L+ GKE+ C C+++ F  D  +A+ ++DMY+K G++  A++
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK 431

Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
           VF  +  K L  WN ++  +A  G   EA+ LF+ +   G  P+ IT+  ++ +   +G 
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491

Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWG 876
           V+E    F  M +   IIP +  ++ M++ + + G  +EA  F+R M     +P+A    
Sbjct: 492 VDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550

Query: 877 ALLGSC----------RIHGHL 888
             L +C           IHG++
Sbjct: 551 VALSACAHLASLHIGRTIHGYI 572



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 181/733 (24%), Positives = 310/733 (42%), Gaps = 144/733 (19%)

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF---DV 329
           GE++E L +  E+  + +     I   IL+ C        G ++HA ++K G DF   + 
Sbjct: 49  GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG-DFYARNE 107

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
           +++  L+ FY KC  +E A  LFS++  + +   W  II VK R    E A+  F EM  
Sbjct: 108 YIETKLVIFYAKCDALEIAEVLFSKLR-VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166

Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
           +     +  +  + +AC  +     G+ +HGYV+KS LE  + V + L  MY +   L+ 
Sbjct: 167 NEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDD 226

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A++VFD + D N  +WN+++  Y   G  + A  LF+ M    ++P  +T          
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT---------- 276

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
                                    VS  L A   +  ++ G++SH   + NG++ D  +
Sbjct: 277 -------------------------VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311

Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
           GTSL++ Y K   ++ A+ VFD M  +++V WN +ISGY  +GL  +A  M   M  E++
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371

Query: 630 KPDLVSWNSLVSGYS-----IWGQSKEALVIIHHMK------------------------ 660
           K D V+  +L+S  +       G+  +   I H  +                        
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK 431

Query: 661 --NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
             +S +  +++ W +L++   ++    E+L+ F  MQ E + PN  T + ++     L L
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII-----LSL 486

Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
           L+NG+       K+ F++    ++G+I                       L SW  M+ G
Sbjct: 487 LRNGQVDEA---KDMFLQ--MQSSGII---------------------PNLISWTTMMNG 520

Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
               G  +EAIL   ++ E+G +P+A + T  L+AC +   +  G      +  +     
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580

Query: 839 TIEHYSCMVDLLGKA-------------------------------GYLDEAWDFIRTMP 867
            +   + +VD+  K                                G L EA    R++ 
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 640

Query: 868 ---FKPDATIWGALLGSCRIHGHLE-----YAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
               KPD      +L +C   G +      + +I S+R  K  PC   +Y LM++LLA +
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMK--PC-LEHYGLMVDLLASA 697

Query: 920 NRWEDVERLRHSM 932
              E   RL   M
Sbjct: 698 GETEKALRLIEEM 710



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 12/220 (5%)

Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
           P+  ++   +S   +N   +E+L    +M   +++        +LQ C     L  GK+I
Sbjct: 33  PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92

Query: 726 HCLCLKNG--FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
           H   LKNG  + ++ Y+ T L+  Y+K   L+ A  +F K   + + SW  +I      G
Sbjct: 93  HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIG 152

Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEH- 842
             + A++ F E+LE    PD      +   CK  G ++  W  F      Y +   +E  
Sbjct: 153 LCEGALMGFVEMLENEIFPDNFVVPNV---CKACGALK--WSRFGRGVHGYVVKSGLEDC 207

Query: 843 ---YSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
               S + D+ GK G LD+A      +P + +A  W AL+
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDR-NAVAWNALM 246


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 200/641 (31%), Positives = 331/641 (51%), Gaps = 91/641 (14%)

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
           +  +   A+ + ++M  +     S T   +LQ C    +  + K +H +++++  E    
Sbjct: 41  KQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFEC--- 97

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
                                       ++S  N ++S Y  LG +  A  +F++M    
Sbjct: 98  ---------------------------QDISLGNKLVSIYVKLGSLVEARRVFDEMPVK- 129

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
              ++++W  +++ +  H   Q  L     MQ +G +PN  + + +L A T+L +L    
Sbjct: 130 ---NVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG--- 183

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
           E H  I++ G + +++VG  L+DMY K  C++ A+E+FD M  R++V+WN++I+GY   G
Sbjct: 184 EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNG 243

Query: 613 LFVNAKKMLNQMEEEEI---------------------------KPDLVSWNSLVSGYSI 645
           L  +A K+  ++ + ++                           + +LVSWN++++GY  
Sbjct: 244 LIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQ 303

Query: 646 WGQSKEALVIIHHMKNSGIYP---------------------------NVVTWTSLISGS 678
            G  KEA  +   M    +                             NVV+W ++I+G 
Sbjct: 304 NGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGY 363

Query: 679 LQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
            QN     +LK F QMQ  D+KPN+ T + +L  C  L +L+ G E H + +++GF  D 
Sbjct: 364 SQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDV 423

Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
            V   L+ MY+K G+++ AR+VF +   +  AS + MI+G+AI G  KE++ LF ++  T
Sbjct: 424 LVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFT 483

Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
           G +PD +TF  +L+AC ++GLV+EG +YFD M+  Y+I P +EHY CM+DLLG+AG  DE
Sbjct: 484 GLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDE 543

Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
           A D I  MP KPDA +WG+LL +CR H +++  E  ++ L  L P N A Y L+ N+ A 
Sbjct: 544 ANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAA 603

Query: 919 SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEG 959
           + RW+D+  +R+ M +  VK  L  SWI I + VH F   G
Sbjct: 604 AGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFLVGG 644



 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 262/568 (46%), Gaps = 29/568 (5%)

Query: 205 RCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSF 264
           + L   K  HA MI+         +   L+  Y++ G    A + F     ++   W++ 
Sbjct: 78  KSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAM 137

Query: 265 LEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRG 324
           +  Y       QE L  + E+   G+         IL  CT L    LG E H  ++K G
Sbjct: 138 IAAYARHE-HGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEV--LG-EFHDEIVKGG 193

Query: 325 FDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
           F+ +V +   L++ Y K   +E A +LF ++    D + WN +I   ++N   E+A+KLF
Sbjct: 194 FESNVFVGNGLVDMYAKRGCIEFARELFDKMPQ-RDVVSWNAMIAGYVQNGLIEDALKLF 252

Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
           +E+     K    T   M+   A+ G      ++     +   E NL   N +I+ Y +N
Sbjct: 253 QEI----PKRDVITWNTMMAGYAQCGDVENAVEL----FEKMPEQNLVSWNTMIAGYVQN 304

Query: 445 NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL 504
             ++ A ++F  M + N+ SWN++IS +   G V+ A  LF  M       ++++WN ++
Sbjct: 305 GSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPEC----NVVSWNAMI 360

Query: 505 SGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLD 564
           +G+  +G  +N L L   MQ +  +PN  + ++VL A   L +L+ G E+H  ++R+G  
Sbjct: 361 AGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQ 420

Query: 565 YDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQM 624
            D+ VG +L+ MY K   +++A++VFD M+ ++  + +++I GY   G    + ++  QM
Sbjct: 421 SDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQM 480

Query: 625 EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNVVTWTSLISGSLQNEN 683
           +   +KPD V++  ++S     G   E       M +   I P +  +  +I    +   
Sbjct: 481 QFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGC 540

Query: 684 YRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI--HCLCLKNG------FI 735
           + E+     +M    IKP++    SLL  C     +  G+++  H + L          +
Sbjct: 541 FDEANDLINKMP---IKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLL 597

Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRK 763
            + Y A G  D      N    R+V +K
Sbjct: 598 SNIYAAAGRWDDIGSVRNRMKDRKVKKK 625



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 184/374 (49%), Gaps = 31/374 (8%)

Query: 575 DMYVKNDC----LQNAQEVFDNMKNRNI----VAWNSLISGYCFKGLFVNAKKMLNQMEE 626
           D  VK+ C    L+ A  +  +M    I      ++SL+ G        +AK +   M +
Sbjct: 33  DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92

Query: 627 EEIK-PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYR 685
            + +  D+   N LVS Y   G   EA  +   M       NVV+WT++I+   ++E+ +
Sbjct: 93  TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMP----VKNVVSWTAMIAAYARHEHGQ 148

Query: 686 ESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLI 745
           E+L FF +MQ   I+PN  T +S+L  C  L +L    E H   +K GF  + +V  GL+
Sbjct: 149 EALGFFYEMQDVGIQPNHFTFASILPACTDLEVL---GEFHDEIVKGGFESNVFVGNGLV 205

Query: 746 DMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
           DMY+K G ++ ARE+F K   + + SWN MI G+   G  ++A+ LF E+ +     D I
Sbjct: 206 DMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVI 261

Query: 806 TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
           T+  ++A     G VE   + F+ M  + N++     ++ M+    + G + EA+   + 
Sbjct: 262 TWNTMMAGYAQCGDVENAVELFEKMP-EQNLV----SWNTMIAGYVQNGSVKEAFKLFQI 316

Query: 866 MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP-CNSANYNLMMNLLAMSNRWED 924
           MP + +   W A++     +G +E A     +LFK  P CN  ++N M+   + + + E+
Sbjct: 317 MPER-NVISWNAVISGFAQNGQVEEA----LKLFKTMPECNVVSWNAMIAGYSQNGQAEN 371

Query: 925 VERLRHSMDEVGVK 938
             +L   M  V +K
Sbjct: 372 ALKLFGQMQMVDMK 385


>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
 gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
          Length = 705

 Score =  367 bits (943), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 212/649 (32%), Positives = 353/649 (54%), Gaps = 41/649 (6%)

Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEV--SDLEDDLLWNEIIMVKL 372
           +VH++ +  G      +   L++ Y +   V  A K+F         + LLWN II   +
Sbjct: 56  QVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANV 115

Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
            +     A++L+ +M+         T   +L+A + +GAF+  K +H +V++   +++L 
Sbjct: 116 YHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLH 175

Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
           V N LI MY++  +++ A +VFD M+  ++ SWN+M+S Y     V+ A  +F++M    
Sbjct: 176 VGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEG 235

Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
           ++P+ +TW  LLS H   G  +  + L   M+  G  P    ++VVL    +L  L  G+
Sbjct: 236 VEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQ 295

Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
             HGY+++ G                                N  + A N+LI+ Y   G
Sbjct: 296 MIHGYMVKGGF-------------------------------NDYLFAKNALITLYGKGG 324

Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP----NV 668
              +A+K+ ++M+ +    +LVSWN+L+S ++  G   +AL ++  ++    YP    NV
Sbjct: 325 GVGDAEKLFHEMKVK----NLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNV 380

Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCL 728
           +TW+++I G        ESL+ F +MQ  ++K NS T++S+L  C  L  L  G+E+H  
Sbjct: 381 ITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGH 440

Query: 729 CLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEA 788
            ++     +  V  GLI+MY+K G+ K    VF K  N+   SWN MI G+  +G GK+A
Sbjct: 441 VIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDA 500

Query: 789 ILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVD 848
           +  F+ ++++G++PD +TF A L+AC ++GLV EG   F  M  ++ I P IEHY+CMVD
Sbjct: 501 LATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVD 560

Query: 849 LLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSAN 908
           LLG+AG ++EA + I+ MP +P+A IW +LL SCR+H   + AE A+ ++  L    + +
Sbjct: 561 LLGRAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGS 620

Query: 909 YNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
           + L+ N+ A S RWED  R+R S    G+K V  WSWI++ + V++F A
Sbjct: 621 HMLLSNIFAASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMFKA 669



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 238/523 (45%), Gaps = 46/523 (8%)

Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGKG 289
           L+  Y  +G  + A K F       Y++   W+S +     + G   E L+++G++   G
Sbjct: 76  LVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRA-NVYHGYCIEALQLYGKMRNYG 134

Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESAN 349
           V+       ++L+  + L AF +   +H  +++ GF   +H+   L+  Y K   ++ A 
Sbjct: 135 VLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDAR 194

Query: 350 KLFSEVS------------------------------DLE----DDLLWNEIIMVKLRNE 375
           K+F ++                               +LE    + + W  ++    R  
Sbjct: 195 KVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCG 254

Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
             E  + LF +M+       +  +  +L  CA +   + G+ IHGY++K      L   N
Sbjct: 255 HLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKN 314

Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNS----S 491
            LI++Y +   +  A ++F  MK  NL SWN++ISS+   G  D A  L +++       
Sbjct: 315 ALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYP 374

Query: 492 RIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYG 551
            ++P++ITW+ ++ G  + G  +  L + R MQ    + N  +++ VL     L  L  G
Sbjct: 375 EMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLG 434

Query: 552 RESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK 611
           RE HG+++R  +D ++ VG  L++MY K    +    VF+ ++NR+ ++WNS+I+GY   
Sbjct: 435 REMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTH 494

Query: 612 GLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVT 670
           GL  +A    N M +   +PD V++ + +S  S  G   E   +   M+ N  I P +  
Sbjct: 495 GLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEH 554

Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
           +  ++    +     E+      M  E   PN+   SSLL +C
Sbjct: 555 YACMVDLLGRAGLVEEASNIIKGMPME---PNAYIWSSLLNSC 594



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 193/436 (44%), Gaps = 80/436 (18%)

Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH- 460
           +L+ C  +      KQ+H   + +    +  V   L+S+YSR   +  A +VF S     
Sbjct: 44  LLRQCNGI---QHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFEC 100

Query: 461 --NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLT 518
             N   WNS+I +    GY   A  L+ K                               
Sbjct: 101 YSNFLLWNSIIRANVYHGYCIEALQLYGK------------------------------- 129

Query: 519 LLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYV 578
               M++ G   +G +  ++L+A + L      +  H ++++ G    L+VG  L+ MY 
Sbjct: 130 ----MRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYA 185

Query: 579 KNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS 638
           K + + +A++VFD M+ +++V+WN+++SGY +      A +M +QME E ++P+ V+W S
Sbjct: 186 KLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTS 245

Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQED 698
           L+S ++  G  +E +V+                                   F +M+ + 
Sbjct: 246 LLSSHARCGHLEETMVL-----------------------------------FCKMRMKG 270

Query: 699 IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAR 758
           + P +  ++ +L  C  L  L +G+ IH   +K GF    +    LI +Y K G +  A 
Sbjct: 271 VGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAE 330

Query: 759 EVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE----TGFQPDAITFTALLAAC 814
           ++F +   K L SWN +I  FA  G   +A+ L  +L +       +P+ IT++A++   
Sbjct: 331 KLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGF 390

Query: 815 KNSGLVEEGWKYFDSM 830
            + GL EE  + F  M
Sbjct: 391 ASKGLGEESLEVFRKM 406


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 249/908 (27%), Positives = 428/908 (47%), Gaps = 99/908 (10%)

Query: 222  KIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLE 280
            K  +SD ++  +L+  Y + G    A + F     R+   W+  +  +   G       E
Sbjct: 259  KPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENG----RRRE 314

Query: 281  VWGELHG---KGVIFRSRILTIILKLCTKLMAF----WLGVEVHASLIKRGFDFDVHLKC 333
             WG L     +G+     +L  +L +C+         W+    H  ++  G D +  +  
Sbjct: 315  TWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWM---AHDYIVGGGLDREAVVAT 371

Query: 334  ALMNFYGKCRDVESANKLFSEVSDLEDDLL--WNEIIMVKLRNEKWENAIKLFREMQFSS 391
            AL++ + +C  V+ A ++F +V+D    ++  WN +I         + A+ L   +Q   
Sbjct: 372  ALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQG 431

Query: 392  AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
             K    T +  L AC+   +  +G+ +H  + +S  +  +SV N L++MY +   L    
Sbjct: 432  VKPNCITFISSLGACS---SLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSL---- 484

Query: 452  RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
               DS K                         LF++M     + D+ +WN  ++ H  HG
Sbjct: 485  --LDSAK-------------------------LFSEM----AEKDLASWNSAIAAHSYHG 513

Query: 512  SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
                 + LL  M+  GF     +    L + T+   L+ G   H  I++ G + D  V +
Sbjct: 514  RSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVAS 573

Query: 572  SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
            ++++MY +   L  A+E+F  +K  +++ W  +++ YC  G      +    M  E +KP
Sbjct: 574  AVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKP 633

Query: 632  DLVSWNSLVSGYS----------IW--------GQSKEALVI---------------IHH 658
              V+  +L++  +          +W        G   E +V                   
Sbjct: 634  TGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARA 693

Query: 659  MKNSGIYPNVVTWTSLISGSLQNENYRES-LKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
            + +     +V   T++++  ++ E  +E+ L  F +M  E ++P+S T+ + +  CGGL 
Sbjct: 694  IFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLA 753

Query: 718  LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
               + K +H    + G   +  VA GL+DMY K+G++ +AR +F ++  + + +WN M  
Sbjct: 754  DPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAG 813

Query: 778  GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
             +   G  +  + L   +   G++PD++TF +LL+ C +SGL+EE    F +M  ++ I 
Sbjct: 814  AYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGID 873

Query: 838  PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT--IWGALLGSCRIHGHLEYAEIAS 895
            P+ +HYSC++DLL +AG L +A DFI  +     A+  +W ALLG+CR  G+       +
Sbjct: 874  PSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGNSSSRARRA 933

Query: 896  RR----LFKLEPCN----SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
             R    + K+EP +    SA +  + N+ A S  W++   +R +M E G++     S I 
Sbjct: 934  ARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIA 993

Query: 948  IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
            +   +H F A    HP   EIY EL  L   M   GYV DT  V  ++ E +K  +L  H
Sbjct: 994  VKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCH 1053

Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
            +EKLA+ +G++ T   + +R+IKN R C DCHTA K +S + GREI +RD  RFHHFR G
Sbjct: 1054 SEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNG 1113

Query: 1068 ECSCNDCW 1075
             CSC D W
Sbjct: 1114 SCSCGDYW 1121



 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 145/668 (21%), Positives = 274/668 (41%), Gaps = 82/668 (12%)

Query: 197 FLNETNKFRCLSSVKSKHAQMIKMGKIWNSDD------MVKSLIFHYLEFGDFTSAAKAF 250
            L E  +   L+  K  HAQ+ + G + +  +      +   L+  Y + G    A +AF
Sbjct: 20  LLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAF 79

Query: 251 FLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAF 310
                ++   W+S L  Y   G   Q L E + ++   GV     +   +LK C +L   
Sbjct: 80  DSIAHKNIFSWTSILVAYFHAGLHAQAL-ERFHQMIKAGVEPDRLVYARLLKECGRLGDL 138

Query: 311 WLGVEVHASLIKRGFDFDVH-------LKCALMNFYGKCRDVESANKLFSEVSDLEDDLL 363
             G  +HA + + G   D         L   L+  YGKC   + A + F  ++  ++   
Sbjct: 139 AQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAH-KNIFS 197

Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
           W  I++          A++ F +M  +  +      +  L  C  +    +G  IH  + 
Sbjct: 198 WTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQ 257

Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
              L+S+L + N L+SM                               Y   G +D+A  
Sbjct: 258 DKPLDSDLEIGNALVSM-------------------------------YGKCGRLDLAKE 286

Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT 543
           LF+ +     + ++I+W  L+S    +G  +    LLR M   G +P+   +  +L   +
Sbjct: 287 LFDCLE----RRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCS 342

Query: 544 ELRLLKYGR-ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN---IV 599
              +L      +H YI+  GLD +  V T+L+ M+ +   +  A+E+F+ + + +   I 
Sbjct: 343 SRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIE 402

Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH- 658
            WN++I+ Y  +G    A  +L+ ++ + +KP+ +++ S +   S     +   ++IH  
Sbjct: 403 CWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQDGRALHLLIHES 462

Query: 659 ----------------------MKNSGIYP-----NVVTWTSLISGSLQNENYRESLKFF 691
                                 + ++ ++      ++ +W S I+    +    E +K  
Sbjct: 463 GFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLL 522

Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
            QM+ E       T  + L +C     LQ+G  +H   ++ G+  D  VA+ +I+MY + 
Sbjct: 523 DQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRC 582

Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
           G L  ARE+F +     +  W  M+  +   G  K+ +  F  +L  G +P  +T   L+
Sbjct: 583 GGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLI 642

Query: 812 AACKNSGL 819
               +SGL
Sbjct: 643 TCVADSGL 650



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 226/543 (41%), Gaps = 97/543 (17%)

Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSAL------ESNLS-VCNCLISMYSRNNKLEL 449
           R+  ++L+ C ++G   +GK++H  + +S L      ES    + NCL+ MY +  + + 
Sbjct: 15  RSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDE 74

Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
           A R FDS+   N                                   I +W  +L  +F 
Sbjct: 75  AQRAFDSIAHKN-----------------------------------IFSWTSILVAYFH 99

Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD--- 566
            G +   L     M   G  P+    + +L+    L  L  G+  H  I  +GL  D   
Sbjct: 100 AGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDRE 159

Query: 567 ----LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
                ++G  L+ MY K      AQ  FD++ ++NI +W S++  Y   GL   A +  +
Sbjct: 160 ESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFH 219

Query: 623 QMEEEEIKPDLVSW-----------------------------------NSLVSGYSIWG 647
           QM +  ++PD + +                                   N+LVS Y   G
Sbjct: 220 QMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCG 279

Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
           +   A  +   ++      NV++WT L+S   +N   RE+      M  E IKP+   + 
Sbjct: 280 RLDLAKELFDCLERR----NVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLL 335

Query: 708 SLLQTCGGLGLL-QNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSAN 766
           +LL  C   G+L ++    H   +  G  ++A VAT L+ M+++ G +  ARE+F K A+
Sbjct: 336 TLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVAD 395

Query: 767 ---KTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
              + +  WN MI  +A  G  KEA+ L   L   G +P+ ITF + L AC +   +++G
Sbjct: 396 HSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDG 452

Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
            +    +  +      +   + +V + GK G L ++      M  K D   W + + +  
Sbjct: 453 -RALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEK-DLASWNSAIAAHS 510

Query: 884 IHG 886
            HG
Sbjct: 511 YHG 513



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 131/301 (43%), Gaps = 12/301 (3%)

Query: 214 HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
           H ++++ G  + +D +V S + + Y   G    A + F    +     W+  L  Y   G
Sbjct: 557 HEKIVQCG--YEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLG 614

Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLC---TKLMAFWLGVEVHASLIKRGFDFDV 329
              ++++E +  +  +G +  + +  + L  C   + L  F  GV + +   + G + + 
Sbjct: 615 -RTKQVMEHFRSMLHEG-LKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESET 672

Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW-ENAIKLFREMQ 388
            +  +L+  + + R +  A  +F    + +   L   ++   ++ E+  E A+ LF  M 
Sbjct: 673 MVANSLIEMFSEFRSLSQARAIFDRNPE-KSVALHTTMLAAYVKGERGKEAALTLFARML 731

Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
               +  S T+V  + AC  +      K++H    +  LES   V N L+ MY +   ++
Sbjct: 732 LEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVD 791

Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS--G 506
            A  +FD     N+++WN+M  +Y   G       L   M     +PD +T+  LLS  G
Sbjct: 792 TARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCG 851

Query: 507 H 507
           H
Sbjct: 852 H 852


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.135    0.414 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,642,398,860
Number of Sequences: 23463169
Number of extensions: 688805988
Number of successful extensions: 1869898
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11214
Number of HSP's successfully gapped in prelim test: 1457
Number of HSP's that attempted gapping in prelim test: 1578568
Number of HSP's gapped (non-prelim): 84072
length of query: 1076
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 923
effective length of database: 8,769,330,510
effective search space: 8094092060730
effective search space used: 8094092060730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 83 (36.6 bits)