BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038364
(1076 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-H65 PE=3 SV=2
Length = 768
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/769 (58%), Positives = 575/769 (74%), Gaps = 2/769 (0%)
Query: 308 MAFWLGVEVHASLIKRGFD-FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNE 366
M +LG+ +H LIKRG D D + A M FYG+C + ANKLF E+ DDL WNE
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPK-RDDLAWNE 59
Query: 367 IIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
I+MV LR+ WE A++LFREMQFS AKA T+VK+LQ C+ F EG+QIHGYVL+
Sbjct: 60 IVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLG 119
Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
LESN+S+CN LI MYSRN KLEL+ +VF+SMKD NLSSWNS++SSYT LGYVD A L +
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
+M ++PDI+TWN LLSG+ + G ++ + +L+ MQ G +P+ SS+S +LQAV E
Sbjct: 180 EMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
LK G+ HGYILRN L YD+YV T+L+DMY+K L A+ VFD M +NIVAWNSL+S
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP 666
G + L +A+ ++ +ME+E IKPD ++WNSL SGY+ G+ ++AL +I MK G+ P
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIH 726
NVV+WT++ SG +N N+R +LK FI+MQ+E + PN+ TMS+LL+ G L LL +GKE+H
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 727 CLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGK 786
CL+ I DAYVAT L+DMY KSG+L+SA E+F NK+LASWNCM+MG+A++G G+
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE 479
Query: 787 EAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
E I F +LE G +PDAITFT++L+ CKNSGLV+EGWKYFD M + Y IIPTIEH SCM
Sbjct: 480 EGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCM 539
Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
VDLLG++GYLDEAWDFI+TM KPDATIWGA L SC+IH LE AEIA +RL LEP NS
Sbjct: 540 VDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNS 599
Query: 907 ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATG 966
ANY +M+NL + NRWEDVER+R+ M V+ +WSWIQIDQ VH+F AEG HP G
Sbjct: 600 ANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEG 659
Query: 967 EIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPI 1026
+IYFELY LVSEMKK GYVPDT C++QDI + EK K+L+ HTEKLA+ YGL+K K API
Sbjct: 660 DIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPI 719
Query: 1027 RVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
RV+KNT +CSD HT AKYMS++R REI L++GAR HHFR+G+CSCND W
Sbjct: 720 RVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 236/511 (46%), Gaps = 73/511 (14%)
Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
G ++ +E++ E+ G + +L++C+ F G ++H +++ G + +V +
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 333 CALMNFYGKCRDVESANKLFSEVSD---------------------------------LE 359
+L+ Y + +E + K+F+ + D L+
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
D++ WN ++ ++AI + + MQ + K + +I +LQA A+ G GK I
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
HGY+L++ L ++ V LI MY + L A VFD M N+ +WNS++S + +
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFT----------------------------- 509
A +L +M I+PD ITWN L SG+ T
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 510 ------HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
+G+++N L + MQ G PN +++S +L+ + L LL G+E HG+ LR L
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
D YV T+L+DMY K+ LQ+A E+F +KN+++ +WN ++ GY G +
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 624 MEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNE 682
M E ++PD +++ S++S G +E M++ GI P + + ++ L
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD-LLGRS 546
Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
Y + FIQ +KP++T + L +C
Sbjct: 547 GYLDEAWDFIQTMS--LKPDATIWGAFLSSC 575
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 119/314 (37%), Gaps = 45/314 (14%)
Query: 204 FRCLSSVKSKHAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYA-- 259
+ CL +K A MI+M K D + SL Y G A + A
Sbjct: 303 YACL--LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 260 --DWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVH 317
W++ S G + L+V+ ++ +GV + ++ +LK+ L G EVH
Sbjct: 361 VVSWTAIFSGC-SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 318 ASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
+++ D ++ AL++ YGK D++SA ++F + + + WN ++M +
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN-KSLASWNCMLMGYAMFGRG 478
Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNC 436
E I F M + + + T +L C G EG K + + + C+C
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
++ + R+ GY+D AW M+ ++PD
Sbjct: 539 MVDLLGRS-------------------------------GYLDEAWDFIQTMS---LKPD 564
Query: 497 IITWNCLLSGHFTH 510
W LS H
Sbjct: 565 ATIWGAFLSSCKIH 578
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis
thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/761 (33%), Positives = 421/761 (55%), Gaps = 36/761 (4%)
Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
+ HA ++K G D ++ L+ Y A+ + + D ++ +I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD-PTIYSFSSLIYALTKA 94
Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
+ + +I +F M S + + + CA++ AF GKQIH S L+ + V
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
+ MY R ++ A +VFD M D ++ + ++++ +Y G ++ + ++M SS I+
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
+I++WN +LSG G ++ + + + + LGF P+ +VS VL +V + +L GR
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
HGY+++ GL D V ++++DMY K+ + +F+ + + +G C
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ--------FEMMEAGVC----- 321
Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
N+ ++G S G +AL + K + NVV+WTS+
Sbjct: 322 ----------------------NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
I+G QN E+L+ F +MQ +KPN T+ S+L CG + L +G+ H ++
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
+ + +V + LIDMY+K G + ++ VF K L WN ++ GF+++G KE + +F
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 795 LLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAG 854
L+ T +PD I+FT+LL+AC GL +EGWKYF MS +Y I P +EHYSCMV+LLG+AG
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 855 YLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMN 914
L EA+D I+ MPF+PD+ +WGALL SCR+ +++ AEIA+ +LF LEP N Y L+ N
Sbjct: 540 KLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSN 599
Query: 915 LLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYH 974
+ A W +V+ +R+ M+ +G+K SWIQ+ V+ A HP +I ++
Sbjct: 600 IYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDE 659
Query: 975 LVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRV 1034
+ EM+K G+ P+ D++E+E+ ++L H+EKLA+V+GL+ T P++VIKN R+
Sbjct: 660 ISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRI 719
Query: 1035 CSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
C DCH K++S GREIF+RD RFHHF++G CSC D W
Sbjct: 720 CGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 213/469 (45%), Gaps = 40/469 (8%)
Query: 281 VWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
V+ + G+I S +L + K+C +L AF +G ++H G D D ++ ++ + Y
Sbjct: 103 VFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYM 162
Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA------ 394
+C + A K+F +SD +D + + ++ R E +++ EM+ S +A
Sbjct: 163 RCGRMGDARKVFDRMSD-KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221
Query: 395 ----------ISRTIVKMLQACAKVG-------------------AFHEGKQIHGYVLKS 425
+ V M Q +G + G+ IHGYV+K
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ 281
Query: 426 ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLF 485
L + V + +I MY ++ + +F+ + N+ I+ + G VD A +F
Sbjct: 282 GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMF 341
Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
++ ++++W +++G +G L L R MQ G +PN ++ +L A +
Sbjct: 342 ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNI 401
Query: 546 RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLI 605
L +GR +HG+ +R L +++VG++L+DMY K + +Q VF+ M +N+V WNSL+
Sbjct: 402 AALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461
Query: 606 SGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GI 664
+G+ G + + +KPD +S+ SL+S G + E M GI
Sbjct: 462 NGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGI 521
Query: 665 YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
P + ++ +++ + +E+ +M E P+S +LL +C
Sbjct: 522 KPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWGALLNSC 567
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 41/359 (11%)
Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE------------ 359
+G +H +IK+G D + A+++ YGK V LF++ +E
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 360 -----DDLL-----------------WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR 397
D L W II +N K A++LFREMQ + K
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 398 TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
TI ML AC + A G+ HG+ ++ L N+ V + LI MY++ ++ L+ VF+ M
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 458 KDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVL 517
NL WNS+++ ++ G S+F + +R++PD I++ LLS G
Sbjct: 450 PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 518 TLLRGM-QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV-GTSLMD 575
+ M + G +P S ++ + L+ E++ I + D V G L
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ---EAYDLIKEMPFEPDSCVWGALLNS 566
Query: 576 MYVKN--DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
++N D + A E +++ N + L + Y KG++ + N+ME +K +
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 9/301 (2%)
Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
W+S + G ++ E LE++ E+ GV + +L C + A G H
Sbjct: 356 WTSIIAGCAQNGKDI-EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
++ +VH+ AL++ Y KC + + +F+ + ++ + WN ++ + K +
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT-KNLVCWNSLMNGFSMHGKAKEV 473
Query: 381 IKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG-KQIHGYVLKSALESNLSVCNCLIS 439
+ +F + + K + +L AC +VG EG K + ++ L +C+++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 440 MYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
+ R KL+ A + M + + W ++++S VD+A K+ ++P+
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL--FHLEPENP 591
Query: 499 TWNCLLSGHF-THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
LLS + G + V ++ M+SLG + N + Q + L G +SH
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI--QVKNRVYTLLAGDKSHPQ 649
Query: 558 I 558
I
Sbjct: 650 I 650
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370 OS=Arabidopsis
thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust.
Identities = 310/990 (31%), Positives = 500/990 (50%), Gaps = 83/990 (8%)
Query: 128 SQLTRQNTAIVMPKLHSIYHHFNTRTSINQN--RHSHKPNSITNSPTSLALPPTDTLAKQ 185
S + +AI P++ ++ T S +N R S++P + SP T A Q
Sbjct: 12 SNMMYSASAISFPRVR-LHCSIPTEPSCRRNPFRQSNQPVQVP-SPKLACFDGVLTEAFQ 69
Query: 186 ----AQLSCISSGFCFLNE-TNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEF 240
++ + F ++ E K R +S + H+++ K + D + L+F Y +
Sbjct: 70 RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129
Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
G A K F R+ W++ + Y S GE L ++ + +GV +
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVS-NGEPASALALYWNMRVEGVPLGLSSFPAL 188
Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
LK C KL G E+H+ L+K G+ + AL++ Y K D+ +A +LF + D
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
+LWN I+ + K ++LFREM + S TIV L AC GK+IH
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 421 YVLKSALESN-LSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
VLKS+ S+ L VCN LI+MY+R G +
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTR-------------------------------CGKMP 337
Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
A + +MN++ D++TWN L+ G+ + Y+ L M + G + + S++ ++
Sbjct: 338 QAERILRQMNNA----DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
A L L G E H Y++++G D +L VG +L+DMY K + F M +++++
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453
Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI--IH 657
+W ++I+GY V A ++ + ++ ++ D + S++ S+ K L++ IH
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL---KSMLIVKEIH 510
Query: 658 -HMKNSGIY------------------------------PNVVTWTSLISGSLQNENYRE 686
H+ G+ +VV+WTS+IS S N N E
Sbjct: 511 CHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
+++ F +M + + +S + +L L L G+EIHC L+ GF + +A ++D
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 747 MYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAIT 806
MY+ G+L+SA+ VF + K L + MI + ++G GK A+ LF ++ PD I+
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 807 FTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
F ALL AC ++GL++EG + M +Y + P EHY C+VD+LG+A + EA++F++ M
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750
Query: 867 PFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVE 926
+P A +W ALL +CR H E EIA++RL +LEP N N L+ N+ A RW DVE
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810
Query: 927 RLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM-KKLGYV 985
++R M G++ SWI++D VH F+A HP + EIY +L + ++ +++GYV
Sbjct: 811 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYV 870
Query: 986 PDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYM 1045
DT+ V ++DE EK ++L H+E++AI YGL++T RA +R+ KN RVC DCHT K +
Sbjct: 871 ADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLV 930
Query: 1046 SLVRGREIFLRDGARFHHFREGECSCNDCW 1075
S + R+I +RD RFHHF G CSC D W
Sbjct: 931 SKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis
thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/745 (35%), Positives = 422/745 (56%), Gaps = 50/745 (6%)
Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
SD+++ WN I +R + A+++F+ M S+ + + M+ + G F
Sbjct: 62 SDIKE---WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN----GMISGYLRNGEFELA 114
Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
+++ E +L N +I Y RN L A +F+ M + ++ SWN+M+S Y
Sbjct: 115 RKL----FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL--------- 526
G VD A S+F++M + + ++WN LLS + + + L + ++
Sbjct: 171 GCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 527 -GFRPNGSSV-------SVVLQAVTELRLLKYGRESHGYI--LRNGLD----YDLYVGTS 572
GF V S+ ++ V + G G I R D D++ T+
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP- 631
++ Y++N ++ A+E+FD M RN V+WN++++GY V ++M E ++ P
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGY------VQGERMEMAKELFDVMPC 340
Query: 632 -DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
++ +WN++++GY+ G+ EA + M + V+W ++I+G Q+ + E+L+
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRL 396
Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
F+QM++E + N ++ SS L TC + L+ GK++H +K G+ +V L+ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
G+++ A ++F++ A K + SWN MI G++ +G G+ A+ F + G +PD T A+
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
L+AC ++GLV++G +YF +M+ DY ++P +HY+CMVDLLG+AG L++A + ++ MPF+P
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 871 DATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRH 930
DA IWG LLG+ R+HG+ E AE A+ ++F +EP NS Y L+ NL A S RW DV +LR
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 931 SMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRC 990
M + GVK V +SWI+I H FS HP EI+ L L MKK GYV T
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSV 696
Query: 991 VYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRG 1050
V D++EEEK +++ H+E+LA+ YG+M+ S PIRVIKN RVC DCH A KYM+ + G
Sbjct: 697 VLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITG 756
Query: 1051 REIFLRDGARFHHFREGECSCNDCW 1075
R I LRD RFHHF++G CSC D W
Sbjct: 757 RLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 47/350 (13%)
Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQ 623
D D+ + Y++ A VF M + V++N +ISGY G F A+K+ ++
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 624 MEEEEIKPDLVSWNSLVSGY---SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
M E DLVSWN ++ GY G+++E I+ +V +W +++SG Q
Sbjct: 121 MPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPER-------DVCSWNTMLSGYAQ 169
Query: 681 NENYRESLKFFIQM-QQEDIKPNS-----TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
N ++ F +M ++ D+ N+ S + + C +N + CL GF
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 735 IKDAYVATG-----------------LIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
+K + +I Y++SG + AR++F +S + + +W M+
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
G+ +EA LF ++ E + +++ A+LA +E + FD M
Sbjct: 290 GYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPC----- 340
Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
+ ++ M+ + G + EA + MP K D W A++ GH
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGH 389
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 7/301 (2%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
++I Y + G + A F R W++ + Y S G E L ++ ++ +G
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY-SQSGHSFEALRLFVQMEREGGR 406
Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
+ L C ++A LG ++H L+K G++ + AL+ Y KC +E AN L
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
F E++ +D + WN +I R+ E A++ F M+ K T+V +L AC+ G
Sbjct: 467 FKEMAG-KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 412 FHEGKQ-IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMI 469
+G+Q + + N C++ + R LE A + +M + + + W +++
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGF 528
+ G ++A + +K+ + ++P+ LLS + + G + +V L M+ G
Sbjct: 586 GASRVHGNTELAETAADKIFA--MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 529 R 529
+
Sbjct: 644 K 644
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis
thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust.
Identities = 278/820 (33%), Positives = 433/820 (52%), Gaps = 83/820 (10%)
Query: 297 LTIILKLCTKLM--------AFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESA 348
L+ +L+LCT L+ + VH +IK G F V+L LMN Y K A
Sbjct: 9 LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHA 68
Query: 349 NKLFSEV------------------SDLE------------DDLLWNEIIMVKLRNEKWE 378
KLF E+ D++ D + W +I+ ++
Sbjct: 69 RKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYH 128
Query: 379 NAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLI 438
AI++ +M + T+ +L + A GK++H +++K L N+SV N L+
Sbjct: 129 KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188
Query: 439 SMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDII 498
+MY++ +A VFD M ++SSWN+MI+ + +G +D+A + F +M + DI+
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM----AERDIV 244
Query: 499 TWNCLLSGHFTHGSYQNVLTLLRGM--QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
TWN ++SG G L + M SL P+ +++ VL A L L G++ H
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
+I+ G D + + N+LIS Y G
Sbjct: 304 HIVTTGFDI-------------------------------SGIVLNALISMYSRCGGVET 332
Query: 617 AKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
A++++ Q +++K + + +L+ GY G +A I +K+ +VV WT++I
Sbjct: 333 ARRLIEQRGTKDLKIE--GFTALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIV 386
Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIK 736
G Q+ +Y E++ F M +PNS T++++L L L +GK+IH +K+G I
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 737 DAYVATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
V+ LI MY+K+GN+ SA F + SW MI+ A +G+ +EA+ LF +
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
L G +PD IT+ + +AC ++GLV +G +YFD M IIPT+ HY+CMVDL G+AG
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566
Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
L EA +FI MP +PD WG+LL +CR+H +++ ++A+ RL LEP NS Y+ + NL
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANL 626
Query: 916 LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
+ +WE+ ++R SM + VK +SWI++ VHVF E HP EIY + +
Sbjct: 627 YSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
Query: 976 VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
E+KK+GYVPDT V D++EE K ++L H+EKLAI +GL+ T + +R++KN RVC
Sbjct: 687 WDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVC 746
Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
+DCHTA K++S + GREI +RD RFHHF++G CSC D W
Sbjct: 747 NDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 236/514 (45%), Gaps = 47/514 (9%)
Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
Y + GD S + F R W++ + Y++ G + + + V G++ +G+
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG-QYHKAIRVMGDMVKEGIEPTQFT 148
Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC-------------- 342
LT +L G +VH+ ++K G +V + +L+N Y KC
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 343 -RDVESANKLFS---EVSDLE------------DDLLWNEIIMVKLRNEKWEN--AIKLF 384
RD+ S N + + +V ++ D + WN M+ N++ + A+ +F
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS--MISGFNQRGYDLRALDIF 266
Query: 385 REMQFSSAKAISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
+M S + R T+ +L ACA + GKQIH +++ + + + V N LISMYSR
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 444 NNKLELATRVFD--SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
+E A R+ + KD + + +++ Y LG ++ A ++F + D++ W
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWT 382
Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
++ G+ HGSY + L R M G RPN +++ +L + L L +G++ HG +++
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKM 620
G Y + V +L+ MY K + +A FD ++ R+ V+W S+I G A ++
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKN-SGIYPNVVTWTSLISGSL 679
M E ++PD +++ + S + G + MK+ I P + + ++
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
+ +E+ +F +M I+P+ T SLL C
Sbjct: 563 RAGLLQEAQEFIEKMP---IEPDVVTWGSLLSAC 593
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 44/284 (15%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
+L+ Y++ GD A F R W++ + YE G E + ++ + G G
Sbjct: 352 ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG-SYGEAINLFRSMVGGGQR 410
Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
S L +L + + L + G ++H S +K G + V + AL+ Y K ++ SA++
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
F + D + W +I+ ++ E A++LF M + T V + AC G
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530
Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN-----LSSWN 466
++G+Q FD MKD + LS +
Sbjct: 531 VNQGRQ-----------------------------------YFDMMKDVDKIIPTLSHYA 555
Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
M+ + G + A KM I+PD++TW LLS H
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMP---IEPDVVTWGSLLSACRVH 596
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750, chloroplastic
OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1
Length = 871
Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/817 (33%), Positives = 435/817 (53%), Gaps = 76/817 (9%)
Query: 295 RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSE 354
R L +L+LC + G EV + GF D +L L Y C D++ A+++F E
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154
Query: 355 VSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE 414
V +E L WN ++ ++ + +I LF++M S + S T + ++ + + + H
Sbjct: 155 VK-IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 415 GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTG 474
G+Q+HG++LKS SV N L++ Y +N +
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQR---------------------------- 245
Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
VD A +F++M + D+I+WN +++G+ ++G + L++ M G + ++
Sbjct: 246 ---VDSARKVFDEMT----ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 298
Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
+ V + RL+ GR H ++ + +L+DMY K L +A+ VF M
Sbjct: 299 IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------------- 635
+R++V++ S+I+GY +GL A K+ +MEEE I PD+ +
Sbjct: 359 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418
Query: 636 ---W-------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
W N+L+ Y+ G +EA ++ M+ ++++W ++I G
Sbjct: 419 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR----VKDIISWNTIIGGYS 474
Query: 680 QNENYRESLKFF-IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA 738
+N E+L F + ++++ P+ T++ +L C L G+EIH ++NG+ D
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 739 YVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
+VA L+DMY+K G L A +F A+K L SW MI G+ ++G GKEAI LF+++ +
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 799 GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDE 858
G + D I+F +LL AC +SGLV+EGW++F+ M + I PT+EHY+C+VD+L + G L +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 859 AWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAM 918
A+ FI MP PDATIWGALL CRIH ++ AE + ++F+LEP N+ Y LM N+ A
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 919 SNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE 978
+ +WE V+RLR + + G++ SWI+I V++F A + +P T I L + +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 979 MKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDC 1038
M + GY P T+ D +E EK + L H+EKLA+ G++ + IRV KN RVC DC
Sbjct: 775 MIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDC 834
Query: 1039 HTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
H AK+MS + REI LRD RFH F++G CSC W
Sbjct: 835 HEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 235/527 (44%), Gaps = 47/527 (8%)
Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAA 247
SC+S F + R + + H ++K G + + SL+ YL+ SA
Sbjct: 198 FSCVSKSF------SSLRSVHGGEQLHGFILKSG-FGERNSVGNSLVAFYLKNQRVDSAR 250
Query: 248 KAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKL 307
K F R W+S + Y S G ++ L V+ ++ G+ + + C
Sbjct: 251 KVFDEMTERDVISWNSIINGYVS-NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 309
Query: 308 MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEI 367
LG VH+ +K F + L++ Y KC D++SA +F E+SD + + +
Sbjct: 310 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVSYTSM 368
Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
I R A+KLF EM+ T+ +L CA+ EGK++H ++ ++ L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
++ V N L+ MY++ ++ A VF M+ ++ SWN++I Y+ Y + A SLFN
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
+ ++ F P+ +V+ VL A L
Sbjct: 489 L----------------------------------LEEKRFSPDERTVACVLPACASLSA 514
Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
GRE HGYI+RNG D +V SL+DMY K L A +FD++ ++++V+W +I+G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYP 666
Y G A + NQM + I+ D +S+ SL+ S G E + M++ I P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
V + ++ + + ++ +F M I P++T +LL C
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMP---IPPDATIWGALLCGC 678
Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 153/619 (24%), Positives = 262/619 (42%), Gaps = 83/619 (13%)
Query: 233 LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIF 292
L Y GD A++ F W+ + + G+ + ++ ++ GV
Sbjct: 135 LSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK-SGDFSGSIGLFKKMMSSGVEM 193
Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLF 352
S + + K + L + G ++H ++K GF + +L+ FY K + V+SA K+F
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 353 SEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAF 412
E+++ D + WN II + N E + +F +M S + TIV + CA
Sbjct: 254 DEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 312
Query: 413 HEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSY 472
G+ +H +K+ CN L+ MYS+ L+ A VF M D ++ S+ SMI+ Y
Sbjct: 313 SLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY 372
Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNG 532
G A LF +M I PD+ T
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYT--------------------------------- 399
Query: 533 SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDN 592
V+ VL RLL G+ H +I N L +D++V +LMDMY K +Q A+ VF
Sbjct: 400 --VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 593 MKNRNIVAWNSLISGYCFKGLFVN-AKKMLN-QMEEEEIKPDLVS--------------- 635
M+ ++I++WN++I GY K + N A + N +EE+ PD +
Sbjct: 458 MRVKDIISWNTIIGGYS-KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 636 --------------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
NSLV Y+ G AL++ H + + ++V+WT +I
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCG----ALLLAHMLFDDIASKDLVSWTVMI 572
Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
+G + +E++ F QM+Q I+ + + SLL C GL+ G + I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 736 KDAYVATG-LIDMYSKSGNL-KSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFH 793
+ ++DM +++G+L K+ R + W ++ G I+ + K A +
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 794 ELLETGFQPDAITFTALLA 812
++ E +P+ + L+A
Sbjct: 693 KVFE--LEPENTGYYVLMA 709
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430, chloroplastic
OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2
Length = 890
Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust.
Identities = 290/885 (32%), Positives = 459/885 (51%), Gaps = 95/885 (10%)
Query: 244 TSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKL 303
S A + F+ SRS W L + ++E + + ++ G+ + +LK
Sbjct: 48 VSGAPSIFISQSRSPEWWIDLLRS-KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 304 CTKLMAFWLGVEVHASLIKRGFDFD-VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDL 362
L LG ++HA + K G+ D V + L+N Y KC D + K+F +S+ + +
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-RNQV 165
Query: 363 LWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVG---AFHEGKQIH 419
WN +I EKWE A++ FR M + + S T+V ++ AC+ + GKQ+H
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225
Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
Y L+ E N + N L++MY + KL +S ++ S+ G
Sbjct: 226 AYGLRKG-ELNSFIINTLVAMYGKLGKL---------------ASSKVLLGSFGG----- 264
Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
D++TWN +LS + L LR M G P+ ++S VL
Sbjct: 265 ---------------RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 540 QAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
A + L +L+ G+E H Y L+NG LD + +VG++L+DMY + + + VFD M +R I
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 599 VAWNSLISGYC-----------FKGLFVNAKKMLNQMEEEEIKP---------------- 631
WN++I+GY F G+ +A + N + P
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 632 ---------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
D N+L+ YS G+ A+ I M++ ++VTW ++I+G + +E
Sbjct: 430 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSE 485
Query: 683 NYRESLKFFIQMQQED-----------IKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
++ ++L +MQ + +KPNS T+ ++L +C L L GKEIH +K
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILL 791
N D V + L+DMY+K G L+ +R+VF + K + +WN +IM + ++GNG+EAI L
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605
Query: 792 FHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLG 851
++ G +P+ +TF ++ AAC +SG+V+EG + F M DY + P+ +HY+C+VDLLG
Sbjct: 606 LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG 665
Query: 852 KAGYLDEAWDFIRTMPFKPD-ATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
+AG + EA+ + MP + A W +LLG+ RIH +LE EIA++ L +LEP +++Y
Sbjct: 666 RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725
Query: 911 LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
L+ N+ + + W+ +R +M E GV+ SWI+ VH F A + HP + ++
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSG 785
Query: 971 ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
L L M+K GYVPDT CV +++E+EK +L H+EKLAI +G++ T IRV K
Sbjct: 786 YLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAK 845
Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
N RVC+DCH A K++S + REI LRD RFH F+ G CSC D W
Sbjct: 846 NLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 201/448 (44%), Gaps = 32/448 (7%)
Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
L + K HA +K G + + + +L+ Y S + F F R W++ +
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
Y + + LL G G++ S + ++ C + AF +H ++KRG D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
D ++ LM+ Y + ++ A ++F ++ D D + WN +I + +E E+A+ L +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 387 MQ-----------FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
MQ S K S T++ +L +CA + A +GK+IH Y +K+ L ++++V +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
L+ MY++ L+++ +VFD + N+ +WN +I +Y G A L M ++P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 496 DIITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
+ +T+ + + G L + M+ G P+ + V+ L + GR
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL-----LGRAGRIK 671
Query: 555 HGYILRNGLDYDL--------YVGTSLM--DMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
Y L N + D +G S + ++ + QN ++ N+ + ++ N
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI- 730
Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
Y GL+ A ++ M+E+ ++ +
Sbjct: 731 ---YSSAGLWDKATEVRRNMKEQGVRKE 755
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis
thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 274/815 (33%), Positives = 414/815 (50%), Gaps = 83/815 (10%)
Query: 301 LKLCTKL--MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD- 357
L+LC L + L VH ++I GF H+ L++ Y K ++ A +LF E+S+
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 358 -------------------------------LEDDLLWNEIIMVKLRNEKWENAIKLFRE 386
+ D +++N +I N +AI LF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFH-EGKQIHGYVLKSALESNLSVCNCLISMYSR-- 443
M+ K + T +L A V + Q H LKS SV N L+S+YS+
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 444 --NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
+ L A +VFD + + + SW +M++ Y GY D+ L M+ + ++ +N
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNM---KLVAYN 255
Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
++SG+ G YQ L ++R M S G + + V++A LL+ G++ H Y+LR
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
D+ + SL+ +Y K C G F A+ +
Sbjct: 316 E-DFSFHFDNSLVSLYYK-----------------------------C--GKFDEARAIF 343
Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
+M + DLVSWN+L+SGY G EA +I MK N+++W +ISG +N
Sbjct: 344 EKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILSWMIMISGLAEN 395
Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
E LK F M++E +P S +++C LG NG++ H LK GF
Sbjct: 396 GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG 455
Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
LI MY+K G ++ AR+VFR SWN +I +G+G EA+ ++ E+L+ G +
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
PD IT +L AC ++GLV++G KYFDSM T Y I P +HY+ ++DLL ++G +A
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES 575
Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
I ++PFKP A IW ALL CR+HG++E IA+ +LF L P + Y L+ N+ A + +
Sbjct: 576 VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQ 635
Query: 922 WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
WE+V R+R M + GVK + SWI+++ VH F + HP +Y L L EM++
Sbjct: 636 WEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRR 695
Query: 982 LGYVPDTRCVYQDIDEE-EKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
LGYVPDT V D++ + K +L +H+EK+A+ +GLMK IR+ KN R C DCH
Sbjct: 696 LGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHN 755
Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
+++S V R+I LRD RFHHFR GECSC + W
Sbjct: 756 FFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/542 (23%), Positives = 236/542 (43%), Gaps = 99/542 (18%)
Query: 393 KAISRTIVKMLQACAKV--GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
+AI+ L+ C + + + +HG ++ + + N LI +Y ++++L A
Sbjct: 9 RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYA 68
Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
++FD + + + + +M+S Y G + +A +F K + D + +N +++G +
Sbjct: 69 RQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEK--APVCMRDTVMYNAMITGFSHN 126
Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVT-----ELRLLKYGRESHGYILRNGLDY 565
+ + L M+ GF+P+ + + VL + E + +++ H L++G Y
Sbjct: 127 NDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF----HAAALKSGAGY 182
Query: 566 DLYVGTSLMDMYVK----NDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
V +L+ +Y K L +A++VFD + ++ +W ++++GY G F +++L
Sbjct: 183 ITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELL 242
Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
M++ LV++N+++SGY G +EAL ++ M +SGI + T+ S+I
Sbjct: 243 EGMDD---NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVI------ 293
Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
+ C GLLQ GK++H L+ +
Sbjct: 294 -----------------------------RACATAGLLQLGKQVHAYVLRREDFS-FHFD 323
Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
L+ +Y K G AR +F K K L SWN ++ G+ G+ EA L+F E+ E
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK--- 380
Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMS------TDYNIIPTIEHYSC---------- 845
+ +++ +++ +G EEG K F M DY I+ SC
Sbjct: 381 -NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK--SCAVLGAYCNGQ 437
Query: 846 --------------------MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIH 885
++ + K G ++EA RTMP D+ W AL+ + H
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQH 496
Query: 886 GH 887
GH
Sbjct: 497 GH 498
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 181/439 (41%), Gaps = 78/439 (17%)
Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
G QE LE+ + G+ +++ C LG +VHA +++R DF H
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFD 323
Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEII--------------MVKLRNEK-- 376
+L++ Y KC + A +F ++ +D + WN ++ + K EK
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 377 --W-------------ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
W E +KLF M+ + +++CA +GA+ G+Q H
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 422 VLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVA 481
+LK +S+LS N LI+MY++ +E A +VF +M + SWN++I++ G+ A
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 482 WSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
++ +M I+PD IT +LT+L G G ++
Sbjct: 503 VDVYEEMLKKGIRPDRIT----------------LLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVA- 600
V Y + G D+ L+D+ ++ +A+ V +++ +
Sbjct: 547 V--------------YRIPPGADH----YARLIDLLCRSGKFSDAESVIESLPFKPTAEI 588
Query: 601 WNSLISGYCFKG----LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVII 656
W +L+SG G + A K+ + E + ++ L + ++ GQ +E +
Sbjct: 589 WEALLSGCRVHGNMELGIIAADKLFGLIPEHD-----GTYMLLSNMHAATGQWEEVARVR 643
Query: 657 HHMKNSGIYPNVV-TWTSL 674
M++ G+ V +W +
Sbjct: 644 KLMRDRGVKKEVACSWIEM 662
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290 OS=Arabidopsis
thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/813 (31%), Positives = 431/813 (53%), Gaps = 79/813 (9%)
Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
++L+ C+ L ++ + K G + + L++ + + V+ A ++F + D
Sbjct: 41 ALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI-D 96
Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
+ ++L++ ++ + + A++ F M++ + + +L+ C GK+
Sbjct: 97 SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156
Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
IHG ++KS +L L +MY++ ++ A +VFD M +
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----------------- 199
Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
D+++WN +++G+ +G + L +++ M +P+ ++
Sbjct: 200 ------------------DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 538 VLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRN 597
VL AV+ LRL+ G+E HGY +R+G D + + T+L+DMY K L+ A+++FD M RN
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 598 IVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW--------------------- 636
+V+WNS+I Y A + +M +E +KP VS
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 637 --------------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
NSL+S Y + A + +++ +V+W ++I G QN
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNG 417
Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
++L +F QM+ +KP++ T S++ L + + K IH + +++ K+ +V T
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477
Query: 743 GLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQP 802
L+DMY+K G + AR +F + + + +WN MI G+ +G GK A+ LF E+ + +P
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 803 DAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF 862
+ +TF ++++AC +SGLVE G K F M +Y+I +++HY MVDLLG+AG L+EAWDF
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 597
Query: 863 IRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW 922
I MP KP ++GA+LG+C+IH ++ +AE A+ RLF+L P + + L+ N+ ++ W
Sbjct: 598 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 657
Query: 923 EDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKL 982
E V ++R SM G++ S ++I VH F + HP + +IY L L+ +K+
Sbjct: 658 EKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA 717
Query: 983 GYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAA 1042
GYVPDT V ++ + K ++L +H+EKLAI +GL+ T + I V KN RVC+DCH A
Sbjct: 718 GYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNAT 776
Query: 1043 KYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
KY+SLV GREI +RD RFHHF+ G CSC D W
Sbjct: 777 KYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 13/228 (5%)
Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
+V SLI Y + + +AA F SR+ W++ + + G + + L + ++ +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI-DALNYFSQMRSR 432
Query: 289 GV----IFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
V ++T I +L A W +H +++ D +V + AL++ Y KC
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKW----IHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQ 404
+ A +F +S+ WN +I + + A++LF EMQ + K T + ++
Sbjct: 489 IMIARLIFDMMSE-RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 405 ACAKVGAFHEGKQIHGYVLKS--ALESNLSVCNCLISMYSRNNKLELA 450
AC+ G G + Y++K ++E ++ ++ + R +L A
Sbjct: 548 ACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis
thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 290/913 (31%), Positives = 459/913 (50%), Gaps = 88/913 (9%)
Query: 170 SPTSLALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDM 229
SP LA T + Q C + L + + +K H + K G + N
Sbjct: 11 SPMVLATTTTTKPSLLNQSKCTKATPSSLKNC---KTIDELKMFHRSLTKQG-LDNDVST 66
Query: 230 VKSLIFHYLEFG--DFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGE 284
+ L+ E G + S AK F S SY ++S + Y S G E + ++
Sbjct: 67 ITKLVARSCELGTRESLSFAKEVF-ENSESYGTCFMYNSLIRGYAS-SGLCNEAILLFLR 124
Query: 285 LHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
+ G+ L C K A G+++H ++K G+ D+ ++ +L++FY +C +
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 345 VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL-FREMQFSSAKAISRTIVKML 403
++SA K+F E+S+ + + W +I R + ++A+ L FR ++ S T+V ++
Sbjct: 185 LDSARKVFDEMSE-RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243
Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
ACAK+ G++++ ++ S +E N + + L+ MY + N +++A R+FD NL
Sbjct: 244 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
N+M S+Y G A +FN M S ++PD I+ +LS
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS---MLSA----------------- 343
Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
+ + ++LR + +G+ HGY+LRNG + + +L+DMY+K
Sbjct: 344 ---------------ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
A +FD M N+ +V WNS+++GY G A + M E+ I VSWN+++SG
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISG- 443
Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPN 702
L+ GSL + E+++ F MQ QE + +
Sbjct: 444 ------------------------------LVQGSL----FEEAIEVFCSMQSQEGVNAD 469
Query: 703 STTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFR 762
TM S+ CG LG L K I+ KNG D + T L+DM+S+ G+ +SA +F
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 763 KSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEE 822
N+ +++W I A+ GN + AI LF +++E G +PD + F L AC + GLV++
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQ 589
Query: 823 GWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
G + F SM + + P HY CMVDLLG+AG L+EA I MP +P+ IW +LL +C
Sbjct: 590 GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 883 RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLV 942
R+ G++E A A+ ++ L P + +Y L+ N+ A + RW D+ ++R SM E G++
Sbjct: 650 RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPG 709
Query: 943 WSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGK 1002
S IQI H F++ HP I L + LG+VPD V D+DE+EK
Sbjct: 710 TSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIF 769
Query: 1003 VLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFH 1062
+L H+EKLA+ YGL+ + IR++KN RVCSDCH+ AK+ S V REI LRD RFH
Sbjct: 770 MLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFH 829
Query: 1063 HFREGECSCNDCW 1075
+ R+G+CSC D W
Sbjct: 830 YIRQGKCSCGDFW 842
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis
thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 268/816 (32%), Positives = 421/816 (51%), Gaps = 92/816 (11%)
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
+ + CT L + +HA L+ +V + L+N Y +V A F + +
Sbjct: 60 LFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQN-R 115
Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAIS-RTIVKMLQACAKVGAFHEGKQI 418
D WN +I R I+ F SS RT +L+AC V +G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKI 172
Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
H LK ++ V LI +YSR + A +FD M ++ S
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-------------- 218
Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
WN ++SG+ G+ + LTL G++++ SV+VV
Sbjct: 219 ---------------------WNAMISGYCQSGNAKEALTLSNGLRAM------DSVTVV 251
Query: 539 --LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
L A TE G H Y +++GL+ +L+V L+D+Y + L++ Q+VFD M R
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 597 NIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS--------------------- 635
++++WNS+I Y + A + +M I+PD ++
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 636 -------W--------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
W N++V Y+ G A + + + N+ +V++W ++ISG Q
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT----DVISWNTIISGYAQ 427
Query: 681 NENYRESLKFFIQMQQE-DIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
N E+++ + M++E +I N T S+L C G L+ G ++H LKNG D +
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 487
Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
V T L DMY K G L+ A +F + WN +I +G+G++A++LF E+L+ G
Sbjct: 488 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
+PD ITF LL+AC +SGLV+EG F+ M TDY I P+++HY CMVD+ G+AG L+ A
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
FI++M +PDA+IWGALL +CR+HG+++ +IAS LF++EP + + L+ N+ A +
Sbjct: 608 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 667
Query: 920 NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
+WE V+ +R G++ WS +++D V VF HP E+Y EL L +++
Sbjct: 668 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 727
Query: 980 KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCH 1039
K +GYVPD R V QD++++EK +L+SH+E+LAI + L+ T ++ IR+ KN RVC DCH
Sbjct: 728 KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 787
Query: 1040 TAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
+ K++S + REI +RD RFHHF+ G CSC D W
Sbjct: 788 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 166/644 (25%), Positives = 287/644 (44%), Gaps = 87/644 (13%)
Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
L S K HA+++ +I N K L+ Y G+ A F +R W+ +
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAK-LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFD 326
Y G + + + G+ R +LK C ++ G ++H +K GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM 182
Query: 327 FDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL--- 383
+DV++ +L++ Y + + V +A LF E+ + D WN +I ++ + A+ L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMP-VRDMGSWNAMISGYCQSGNAKEALTLSNG 241
Query: 384 FREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSR 443
R M S T+V +L AC + G F+ G IH Y +K LES L V N LI +Y+
Sbjct: 242 LRAMD-------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 444 NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCL 503
+L +VFD M +L SWNS+I +Y A SLF +M SRIQPD
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD------- 347
Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG- 562
LTL+ S++ +L + ++R R G+ LR G
Sbjct: 348 ------------CLTLI-------------SLASILSQLGDIRAC---RSVQGFTLRKGW 379
Query: 563 LDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLN 622
D+ +G +++ MY K + +A+ VF+ + N ++++WN++ISGY G A +M N
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 623 QMEEE-EIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNV------------- 668
MEEE EI + +W S++ S G ++ + + + +G+Y +V
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 669 ------------------VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
V W +LI+ + + +++ F +M E +KP+ T +LL
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNLKSAREVFRKSANKTL 769
C GL+ G+ + + I + G ++DMY ++G L++A + + + +
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 770 AS-WNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
AS W ++ ++GN + L E +P+ + + LL+
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEV--EPEHVGYHVLLS 661
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis
thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 280/906 (30%), Positives = 470/906 (51%), Gaps = 80/906 (8%)
Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFF-LYFSRSYADWSSFL 265
L+ ++ HA +I +G + +SD LI Y F + S+ F + +++ W+S +
Sbjct: 20 LNELRRIHALVISLG-LDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78
Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
+ S G E LE +G+L V ++K C L +G V+ ++ GF
Sbjct: 79 RAF-SKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF 137
Query: 326 DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR 385
+ D+ + AL++ Y + + A ++F E+ + D + WN +I + +E A++++
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
E++ S S T+ +L A + +G+ +HG+ LKS + S + V N L++MY +
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
+ A RVFD M + S+N+MI Y L V+ + +F + N + +PD++T
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLT------ 309
Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
VS VL+A LR L + + Y+L+ G
Sbjct: 310 -----------------------------VSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
+ V L+D+Y K + A++VF++M+ ++ V+WNS+ISGY G + A K+ M
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 626 EEEIKPDLVSW-----------------------------------NSLVSGYSIWGQSK 650
E + D +++ N+L+ Y+ G+
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
++L I M + VTW ++IS ++ ++ L+ QM++ ++ P+ T L
Sbjct: 461 DSLKIFSSMGTG----DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
C L + GKEIHC L+ G+ + + LI+MYSK G L+++ VF + + + +
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576
Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
+W MI + +YG G++A+ F ++ ++G PD++ F A++ AC +SGLV+EG F+ M
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
T Y I P IEHY+C+VDLL ++ + +A +FI+ MP KPDA+IW ++L +CR G +E
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 891 AEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQ 950
AE SRR+ +L P + L N A +W+ V +R S+ + + +SWI++ +
Sbjct: 697 AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGK 756
Query: 951 IVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDI-DEEEKGKVLLSHTE 1009
VHVFS+ P + IY L L S M K GY+PD R V Q++ +EEEK +++ H+E
Sbjct: 757 NVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSE 816
Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
+LAI +GL+ T+ P++V+KN RVC DCH K +S + GREI +RD RFH F++G C
Sbjct: 817 RLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTC 876
Query: 1070 SCNDCW 1075
SC D W
Sbjct: 877 SCKDRW 882
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis
thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/850 (31%), Positives = 430/850 (50%), Gaps = 50/850 (5%)
Query: 267 DYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF- 325
DY G + E + L +G + +L+ C + LG +HA G
Sbjct: 54 DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLF 110
Query: 326 -DFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLF 384
+ DV ++ L++ Y KC + A K+F + + + W+ +I R +W KLF
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRE-RNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 385 REMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN 444
R M K+LQ CA G GK IH V+K + S L V N ++++Y++
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 445 NKLELATRVFDSMKDHNLSSWNS-----------------------------------MI 469
+L+ AT+ F M++ ++ +WNS +I
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
Y LG D A L KM + I D+ TW ++SG +G L + R M G
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
PN ++ + A + L+++ G E H ++ G D+ VG SL+DMY K L++A++V
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
FD++KN+++ WNS+I+GYC G A ++ +M++ ++P++++WN+++SGY G
Sbjct: 410 FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 650 KEALVIIHHMKNSG-IYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSS 708
EA+ + M+ G + N TW +I+G +QN E+L+ F +MQ PNS T+ S
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
LL C L + +EIH L+ V L D Y+KSG+++ +R +F K
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
+ +WN +I G+ ++G+ A+ LF+++ G P+ T ++++ A G V+EG K F
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 649
Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
S++ DY+IIP +EH S MV L G+A L+EA FI+ M + + IW + L CRIHG +
Sbjct: 650 SIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDI 709
Query: 889 EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRW-EDVERLRHSMDEVGVKSVLVWSWIQ 947
+ A A+ LF LEP N+A +++ + A+ + +E + D + +K L SWI+
Sbjct: 710 DMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNL-LKKPLGQSWIE 768
Query: 948 IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
+ ++H F+ T LY LV +M +L D I+EE + + H
Sbjct: 769 VRNLIHTFTTGDQSKLCTD----VLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIH 824
Query: 1008 TEKLAIVYGLMKTK--SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFR 1065
+EK A+ +GL+ + S+ IR++KN R+C DCH AKY+S G +I L D HHF+
Sbjct: 825 SEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFK 884
Query: 1066 EGECSCNDCW 1075
G+CSC D W
Sbjct: 885 NGDCSCKDYW 894
Score = 236 bits (601), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 172/646 (26%), Positives = 293/646 (45%), Gaps = 56/646 (8%)
Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQA 405
+S K S E +++ +E RN A K + +K T +K+L++
Sbjct: 31 KSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLES 90
Query: 406 CAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSW 465
C G+ H G+ +H E ++ V L+SMY++ + A +VFDSM++ NL +W
Sbjct: 91 CIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTW 149
Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
++MI +Y+ ++ V L R M
Sbjct: 150 SAMIGAYS-----------------------------------RENRWREVAKLFRLMMK 174
Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
G P+ +LQ ++ G+ H +++ G+ L V S++ +Y K L
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
A + F M+ R+++AWNS++ YC G A +++ +ME+E I P LV+WN L+ GY+
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 646 WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
G+ A+ ++ M+ GI +V TWT++ISG + N ++L F +M + PN+ T
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 706 MSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA 765
+ S + C L ++ G E+H + +K GFI D V L+DMYSK G L+ AR+VF
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 414
Query: 766 NKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK 825
NK + +WN MI G+ G +A LF + + +P+ IT+ +++ +G E
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMD 474
Query: 826 YFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK---PDATIWGALLGSC 882
F M D + ++ ++ + G DEA + R M F P++ +LL +C
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Query: 883 -RIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
+ G EI L + A N + + A S D+E R + K ++
Sbjct: 535 ANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSG---DIEYSRTIFLGMETKDII 591
Query: 942 VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPD 987
W+ + ++H G+ PA L ++MK G P+
Sbjct: 592 TWNSLIGGYVLH-----GSYGPALA--------LFNQMKTQGITPN 624
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLY-----FSRSYADWSSFLEDYESFGGEVQELLEVWGELH 286
++I Y++ GD A F R+ A W+ + Y G+ E LE++ ++
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ-NGKKDEALELFRKMQ 516
Query: 287 GKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
+ S + +L C L+ + E+H +++R D +K AL + Y K D+E
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
+ +F + + +D + WN +I + + + A+ LF +M+ T+ ++ A
Sbjct: 577 YSRTIFLGM-ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635
Query: 407 AKVGAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
+G EGK++ + Y + ALE C+ ++ +Y R N+LE A + M +
Sbjct: 636 GLMGNVDEGKKVFYSIANDYHIIPALEH----CSAMVYLYGRANRLEEALQFIQEMNIQS 691
Query: 462 LSS-WNSMISSYTGLGYVDVA 481
+ W S ++ G +D+A
Sbjct: 692 ETPIWESFLTGCRIHGDIDMA 712
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/754 (31%), Positives = 401/754 (53%), Gaps = 106/754 (14%)
Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
SS+KA+ +T++K ++ + + KQ+H +++ S+ S + +IS+Y+ L
Sbjct: 1 MSSSKALIKTLIK---NPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLH 56
Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
A +F ++K + +W S+I +T SLF+K +S ++
Sbjct: 57 EALLLFKTLKSPPVLAWKSVIRCFTD-------QSLFSKALASFVE-------------- 95
Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
M++ G P+ + VL++ T + L++G HG+I+R G+D DLY
Sbjct: 96 --------------MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 569 VGTSLMDMYVK-------------------------------NDCL-----QNAQEVFDN 592
G +LM+MY K C+ + + VF+
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 593 MKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEA 652
M +++V++N++I+GY G++ +A +M+ +M ++KPD + +S++ +S + +
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 653 LVIIHHMKNSGIYPNV-------------------------------VTWTSLISGSLQN 681
I ++ GI +V ++W SL++G +QN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVA 741
Y E+L+ F QM +KP + SS++ C L L GK++H L+ GF + ++A
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 742 TGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQ 801
+ L+DMYSK GN+K+AR++F + SW +IMG A++G+G EA+ LF E+ G +
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 802 PDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWD 861
P+ + F A+L AC + GLV+E W YF+SM+ Y + +EHY+ + DLLG+AG L+EA++
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 862 FIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNR 921
FI M +P ++W LL SC +H +LE AE + ++F ++ N Y LM N+ A + R
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561
Query: 922 WEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKK 981
W+++ +LR M + G++ SWI++ H F + HP+ +I L ++ +M+K
Sbjct: 562 WKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621
Query: 982 LGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTA 1041
GYV DT V D+DEE K ++L H+E+LA+ +G++ T+ IRV KN R+C+DCH A
Sbjct: 622 EGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVA 681
Query: 1042 AKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
K++S + REI +RD +RFHHF G CSC D W
Sbjct: 682 IKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 231/496 (46%), Gaps = 56/496 (11%)
Query: 362 LLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGY 421
L W +I + A+ F EM+ S +L++C + G+ +HG+
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 422 VLKSALESNLSVCNCLISMYSR----NNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
+++ ++ +L N L++MY++ +K+ + VFD M +S + + + T +
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN-VFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 478 --VDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
+D +F M + D++++N +++G+ G Y++ L ++R M + +P+ ++
Sbjct: 190 FGIDSVRRVFEVMP----RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
S VL +E + G+E HGY++R G+D D+Y+G+SL+DMY K+ +++++ VF +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNS----------------- 638
R+ ++WNSL++GY G + A ++ QM ++KP V+++S
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 639 ------------------LVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
LV YS G K A I M + V+WT++I G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN----VLDEVSWTAIIMGHAL 421
Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG-KEIHCLCLKNGFIKDAY 739
+ + E++ F +M+++ +KPN ++L C +GL+ + + G ++
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 740 VATGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLET 798
+ D+ ++G L+ A K T + W+ ++ +++ N + L ++ E
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN----LELAEKVAEK 537
Query: 799 GFQPDAITFTALLAAC 814
F D+ A + C
Sbjct: 538 IFTVDSENMGAYVLMC 553
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 215/467 (46%), Gaps = 76/467 (16%)
Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC- 342
E+ G + +LK CT +M G VH +++ G D D++ ALMN Y K
Sbjct: 95 EMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLL 154
Query: 343 ------------------------RDV-----------ESANKLFSEVSDLEDDLLWNEI 367
DV +S ++F EV +D + +N I
Sbjct: 155 GMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF-EVMPRKDVVSYNTI 213
Query: 368 IMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSAL 427
I ++ +E+A+++ REM + K S T+ +L ++ +GK+IHGYV++ +
Sbjct: 214 IAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGI 273
Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
+S++ + + L+ MY+++ ++E + RVF + + SWNS+++ Y G + A LF +
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ 333
Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
M +++++P + + S V+ A L
Sbjct: 334 MVTAKVKPGAVAF-----------------------------------SSVIPACAHLAT 358
Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
L G++ HGY+LR G ++++ ++L+DMY K ++ A+++FD M + V+W ++I G
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYP 666
+ G A + +M+ + +KP+ V++ ++++ S G EA + M K G+
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 667 NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
+ + ++ + E+ F +M ++P + S+LL +C
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMC---VEPTGSVWSTLLSSC 522
Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 140/269 (52%), Gaps = 3/269 (1%)
Query: 238 LEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRIL 297
+ FG S + F + + +++ + Y G ++ L + E+ + S L
Sbjct: 188 MPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQ-SGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 298 TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSD 357
+ +L + ++ + G E+H +I++G D DV++ +L++ Y K +E + ++FS +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY- 304
Query: 358 LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
D + WN ++ ++N ++ A++LFR+M + K + ++ ACA + H GKQ
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 418 IHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGY 477
+HGYVL+ SN+ + + L+ MYS+ ++ A ++FD M + SW ++I + G+
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 478 VDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
A SLF +M ++P+ + + +L+
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 15/268 (5%)
Query: 211 KSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
K H +I+ G +SD + SL+ Y + + + F + R W+S + Y
Sbjct: 262 KEIHGYVIRKG--IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
G E L ++ ++ V + + ++ C L LG ++H +++ GF ++
Sbjct: 320 Q-NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
+ AL++ Y KC ++++A K+F ++ L D++ W IIM + A+ LF EM+
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 390 SSAKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRN 444
K V +L AC+ VG E Y L LE +V + L R
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL----GRA 493
Query: 445 NKLELATRVFDSM-KDHNLSSWNSMISS 471
KLE A M + S W++++SS
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSS 521
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/901 (28%), Positives = 439/901 (48%), Gaps = 77/901 (8%)
Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
V+ HA+++ G + +S + LI Y G A + F + ++ W + +
Sbjct: 206 VEQIHARILYQG-LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
E E + ++ +++ G++ + +L C K+ + +G ++H ++K GF D
Sbjct: 265 KNECEA-EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
++ AL++ Y ++ SA +FS +S D + +N +I + E A++LF+ M
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
+ S T+ ++ AC+ G G+Q+H Y K SN + L+++Y++ +E
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
A F + N+ WN M+ VA+ L + +
Sbjct: 443 ALDYFLETEVENVVLWNVML----------VAYGLLDDL--------------------- 471
Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
+N + R MQ PN + +L+ L L+ G + H I++ + YV
Sbjct: 472 ----RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI 629
+ L+DMY K L A ++ +++V+W ++I+GY A QM + I
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 630 KPDLVSW-----------------------------------NSLVSGYSIWGQSKEALV 654
+ D V N+LV+ YS G+ +E+ +
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
+ + + W +L+SG Q+ N E+L+ F++M +E I N+ T S ++
Sbjct: 648 AFEQTEAG----DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
++ GK++H + K G+ + V LI MY+K G++ A + F + + K SWN
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
+I ++ +G G EA+ F +++ + +P+ +T +L+AC + GLV++G YF+SM+++Y
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
+ P EHY C+VD+L +AG L A +FI+ MP KPDA +W LL +C +H ++E E A
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 895 SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
+ L +LEP +SA Y L+ NL A+S +W+ + R M E GVK SWI++ +H
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 955 FSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIV 1014
F HP EI+ L ++GYV D + ++ E+K ++ H+EKLAI
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 1003
Query: 1015 YGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDC 1074
+GL+ + PI V+KN RVC+DCH K++S V REI +RD RFHHF G CSC D
Sbjct: 1004 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Query: 1075 W 1075
W
Sbjct: 1064 W 1064
Score = 206 bits (525), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 180/669 (26%), Positives = 297/669 (44%), Gaps = 79/669 (11%)
Query: 257 SYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLM-AFWLGVE 315
S+A S ++ + ESF + + +E +G+ + L +L+ C K + G +
Sbjct: 53 SFAAISVYISEDESFQEKRIDSVE------NRGIRPNHQTLKWLLEGCLKTNGSLDEGRK 106
Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
+H+ ++K G D + L L +FY D+ A K+F E+ + WN++I
Sbjct: 107 LHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPE-RTIFTWNKMIKELASRN 165
Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQAC-AKVGAFHEGKQIHGYVLKSALESNLSVC 434
LF M + T +L+AC AF +QIH +L L + VC
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
N LI +YSRN ++LA RVFD ++ + SSW +MIS ++ + +
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG----------------LSKNECE 269
Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
+ I C M LG P + S VL A ++ L+ G +
Sbjct: 270 AEAIRLFC-------------------DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
HG +L+ G D YV +L+ +Y L +A+ +F NM R+ V +N+LI+G G
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLV-----SGYSIWGQSKEALVI-IHHMKNSGI---- 664
A ++ +M + ++PD + SLV G GQ A + N+ I
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 665 ---------------------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
NVV W ++ ++ R S + F QMQ E+I PN
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
T S+L+TC LG L+ G++IH +K F +AYV + LIDMY+K G L +A ++ +
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
A K + SW MI G+ Y +A+ F ++L+ G + D + T ++AC ++EG
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW-DFIRTMPFKPDATIWGALLGSC 882
+ + + + + +V L + G ++E++ F +T D W AL+
Sbjct: 611 -QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA--GDNIAWNALVSGF 667
Query: 883 RIHGHLEYA 891
+ G+ E A
Sbjct: 668 QQSGNNEEA 676
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis
thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/840 (30%), Positives = 418/840 (49%), Gaps = 74/840 (8%)
Query: 270 SFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDV 329
S G QE ++ +H G+ I + +LK+ L G ++H IK GF DV
Sbjct: 69 SRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 128
Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
+ +L++ Y K + + K+F E+ + + + W +I RN + + LF MQ
Sbjct: 129 SVGTSLVDTYMKGSNFKDGRKVFDEMKE-RNVVTWTTLISGYARNSMNDEVLTLFMRMQN 187
Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
+ S T L A+ G G Q+H V+K+ L+ + V N LI++
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINL--------- 238
Query: 450 ATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFT 509
Y G V A LF+K ++TWN ++SG+
Sbjct: 239 ----------------------YLKCGNVRKARILFDKTEVK----SVVTWNSMISGYAA 272
Query: 510 HGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
+G L + M+ R + SS + V++ L+ L++ + H +++ G +D +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEE 628
T+LM Y K + +A +F + N+V+W ++ISG+ A + ++M+ +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 629 IKPDLVSWN-------------------------------SLVSGYSIWGQSKEALVIIH 657
++P+ +++ +L+ Y G+ +EA +
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
+ + ++V W+++++G Q ++K F ++ + IKPN T SS+L C
Sbjct: 453 GIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 718 L-LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
+ GK+ H +K+ V++ L+ MY+K GN++SA EVF++ K L SWN MI
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
G+A +G +A+ +F E+ + + D +TF + AAC ++GLVEEG KYFD M D I
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 837 IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
PT EH SCMVDL +AG L++A I MP +TIW +L +CR+H E +A+
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAE 688
Query: 897 RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
++ ++P +SA Y L+ N+ A S W++ ++R M+E VK +SWI++ + F
Sbjct: 689 KIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFL 748
Query: 957 AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
A HP +IY +L L + +K LGY PDT V QDID+E K VL H+E+LAI +G
Sbjct: 749 AGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFG 808
Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF-REGECSCNDCW 1075
L+ T +P+ +IKN RVC DCH K ++ + REI +RD RFHHF +G CSC D W
Sbjct: 809 LIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 156 bits (394), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 39/405 (9%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
SLI YL+ G+ A F +S W+S + Y + G ++ E L ++ + V
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL-EALGMFYSMRLNYVR 292
Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
++KLC L ++H S++K GF FD +++ ALM Y KC + A +L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
F E+ + + + W +I L+N+ E A+ LF EM+ + T +L A +
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
++H V+K+ E + +V L+ Y + K+E A +VF + D ++ +W++M++
Sbjct: 413 ----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
Y G + A +F ++ I+P+ FT S NV S+G
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPN----------EFTFSSILNVCAATNA--SMG---- 512
Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
G++ HG+ +++ LD L V ++L+ MY K +++A+EVF
Sbjct: 513 ------------------QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Query: 592 NMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW 636
+ +++V+WNS+ISGY G + A + +M++ ++K D V++
Sbjct: 555 RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 212/477 (44%), Gaps = 51/477 (10%)
Query: 484 LFNKMNSSRIQP--DIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQA 541
L+N N P D ++ LL G G Q L + LG + S S VL+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 542 VTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAW 601
L +GR+ H ++ G D+ VGTSL+D Y+K ++ ++VFD MK RN+V W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 602 NSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSW------------------------- 636
+LISGY + + +M+ E +P+ ++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 637 ----------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
NSL++ Y G ++A ++ + +VVTW S+ISG N E
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE----VKSVVTWNSMISGYAANGLDLE 278
Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLID 746
+L F M+ ++ + ++ +S+++ C L L+ +++HC +K GF+ D + T L+
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 747 MYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAI 805
YSK + A +F++ + SW MI GF +EA+ LF E+ G +P+
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 806 TFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRT 865
T++ +L A ++ + + T+Y T+ + ++D K G ++EA
Sbjct: 399 TYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSG 453
Query: 866 MPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFK--LEPCNSANYNLMMNLLAMSN 920
+ K D W A+L G E A L K ++P N ++ ++N+ A +N
Sbjct: 454 IDDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP-NEFTFSSILNVCAATN 508
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/594 (21%), Positives = 261/594 (43%), Gaps = 90/594 (15%)
Query: 214 HAQMIKMGKIWNSDDMV--KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESF 271
H Q IK G + DD+ SL+ Y++ +F K F R+ W++ + Y +
Sbjct: 116 HCQCIKFGFL---DDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY-AR 171
Query: 272 GGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHL 331
E+L ++ + +G S L + + G++VH ++K G D + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 332 KCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSS 391
+L+N Y KC +V A LF + ++++ + WN +I N A+ +F M+ +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
+ + +++ CA + +Q+H V+K + ++ L+ YS+ + A
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 452 RVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
R+F + N+ SW +MIS + + A LF++M ++P+ T+
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY---------- 400
Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
SV+L A+ + E H +++ + VG
Sbjct: 401 -------------------------SVILTALPVIS----PSEVHAQVVKTNYERSSTVG 431
Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIK 630
T+L+D YVK ++ A +VF + +++IVAW+++++GY G A KM ++ + IK
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 631 PDLVSWNSLVS----------------GYSIWGQSKEAL-----VIIHHMKNSGI----- 664
P+ +++S+++ G++I + +L ++ + K I
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 665 ------YPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
++V+W S+ISG Q+ ++L F +M++ +K + T + C GL
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611
Query: 719 LQNGKEIHCLCLKNGFIKDAYVA------TGLIDMYSKSGNLKSAREVFRKSAN 766
++ G++ + ++D +A + ++D+YS++G L+ A +V N
Sbjct: 612 VEEGEKYFDI-----MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 39/274 (14%)
Query: 578 VKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML---------------- 621
V + L NA +FD R+ ++ SL+ G+ G AK++
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 622 ---------------NQMEEEEIK----PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS 662
Q+ + IK D+ SLV Y K+ + MK
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
NVVTWT+LISG +N E L F++MQ E +PNS T ++ L G+ G
Sbjct: 158 ----NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIY 782
++H + +KNG K V+ LI++Y K GN++ AR +F K+ K++ +WN MI G+A
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 783 GNGKEAILLFHELLETGFQPDAITFTALLAACKN 816
G EA+ +F+ + + +F +++ C N
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760, chloroplastic
OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1
Length = 738
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 259/788 (32%), Positives = 416/788 (52%), Gaps = 84/788 (10%)
Query: 293 RSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL--MNFYGKCRDVESANK 350
RSR +++I + C L + H +I+ G D + L M +E A K
Sbjct: 30 RSRHISLIER-CVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85
Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISR-TIVKMLQACAKV 409
+F E+ + WN +I +I F +M S ++ T +++A A+V
Sbjct: 86 VFDEIPK-PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 144
Query: 410 GAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMI 469
+ G+ +HG +KSA+ S++ V N S+I
Sbjct: 145 SSLSLGQSLHGMAVKSAVGSDVFVAN-------------------------------SLI 173
Query: 470 SSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR 529
Y G +D A +F + + D+++WN +++G GS L L + M+S +
Sbjct: 174 HCYFSCGDLDSACKVFTTIK----EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 530 PNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEV 589
+ ++ VL A ++R L++GR+ YI N ++ +L + +++DMY K
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK---------- 279
Query: 590 FDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQS 649
C G +AK++ + MEE+ D V+W +++ GY+I
Sbjct: 280 -------------------C--GSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDY 314
Query: 650 KEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQ-QEDIKPNSTTMSS 708
+ A +++ M ++V W +LIS QN E+L F ++Q Q+++K N T+ S
Sbjct: 315 EAAREVLNSMPQK----DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 709 LLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKT 768
L C +G L+ G+ IH K+G + +V + LI MYSK G+L+ +REVF +
Sbjct: 371 TLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 430
Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
+ W+ MI G A++G G EA+ +F+++ E +P+ +TFT + AC ++GLV+E F
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
M ++Y I+P +HY+C+VD+LG++GYL++A FI MP P ++WGALLG+C+IH +L
Sbjct: 491 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550
Query: 889 EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
AE+A RL +LEP N + L+ N+ A +WE+V LR M G+K S I+I
Sbjct: 551 NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610
Query: 949 DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE-KGKVLLSH 1007
D ++H F + HP + ++Y +L+ ++ ++K GY P+ V Q I+EEE K + L H
Sbjct: 611 DGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLH 670
Query: 1008 TEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREG 1067
+EKLAI YGL+ T++ IRVIKN RVC DCH+ AK +S + REI +RD RFHHFR G
Sbjct: 671 SEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNG 730
Query: 1068 ECSCNDCW 1075
+CSCND W
Sbjct: 731 QCSCNDFW 738
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/566 (25%), Positives = 274/566 (48%), Gaps = 24/566 (4%)
Query: 205 RCLS--SVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTS---AAKAFFLYFSRSYA 259
RC+S +K H MI+ G SD S +F F S A K F +
Sbjct: 39 RCVSLRQLKQTHGHMIRTGTF--SDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 260 DWSSFLEDYESFGGEVQELLEVWG--ELHGKGVIFRSR-ILTIILKLCTKLMAFWLGVEV 316
W++ + Y S V L +W ++ + + ++ ++K ++ + LG +
Sbjct: 97 AWNTLIRAYASGPDPV---LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
H +K DV + +L++ Y C D++SA K+F+ + + +D + WN +I ++
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE-KDVVSWNSMINGFVQKGS 212
Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNC 436
+ A++LF++M+ KA T+V +L ACAK+ G+Q+ Y+ ++ + NL++ N
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
++ MY++ +E A R+FD+M++ + +W +M+ Y + A + N M Q D
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP----QKD 328
Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPNGSSVSVVLQAVTELRLLKYGRESH 555
I+ WN L+S + +G L + +Q + N ++ L A ++ L+ GR H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 556 GYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFV 615
YI ++G+ + +V ++L+ MY K L+ ++EVF++++ R++ W+++I G G
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 616 NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK-NSGIYPNVVTWTSL 674
A M +M+E +KP+ V++ ++ S G EA + H M+ N GI P + +
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
+ L Y E FI+ I P+++ +LL C L N E+ C L
Sbjct: 509 VD-VLGRSGYLEKAVKFIEAMP--IPPSTSVWGALLGACKIHANL-NLAEMACTRLLELE 564
Query: 735 IKDAYVATGLIDMYSKSGNLKSAREV 760
++ L ++Y+K G ++ E+
Sbjct: 565 PRNDGAHVLLSNIYAKLGKWENVSEL 590
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170, chloroplastic
OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1
Length = 850
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 258/820 (31%), Positives = 424/820 (51%), Gaps = 81/820 (9%)
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL- 358
+LK C + F LG VHA LI+ + D L +L++ Y K D A +F +
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 359 -EDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ 417
D + W+ ++ N + +AIK+F E +++AC+ G+
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 418 IHGYVLKSA-LESNLSVCNCLISMYSRN-NKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
G+++K+ ES++ V LI M+ + N E A +VFD M + N
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN-------------- 233
Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
++TW +++ G + + M GF + ++
Sbjct: 234 ---------------------VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTL 272
Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDN 592
S V A EL L G++ H + +R+GL D V SL+DMY K + + + ++VFD
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 593 MKNRNIVAWNSLISGYCFK-GLFVNAKKMLNQM-EEEEIKPDLVSWNSLVS--------- 641
M++ ++++W +LI+GY L A + ++M + ++P+ +++S
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 642 -GYSIWGQS-KEALVIIHHMKNSGIY--------------------PNVVTWTSLISGSL 679
G + GQ+ K L + NS I N+V++ + + G+
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
+N N+ ++ K ++ + ++ ++ T +SLL +G ++ G++IH +K G +
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 740 VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETG 799
V LI MYSK G++ +A VF N+ + SW MI GFA +G + F++++E G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 800 FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEA 859
+P+ +T+ A+L+AC + GLV EGW++F+SM D+ I P +EHY+CMVDLL +AG L +A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 860 WDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMS 919
++FI TMPF+ D +W LG+CR+H + E ++A+R++ +L+P A Y + N+ A +
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
Query: 920 NRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEM 979
+WE+ +R M E + SWI++ +H F HP +IY EL L++E+
Sbjct: 691 GKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Query: 980 KKLGYVPDTRCVYQDI----DEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
K+ GYVPDT V + DE EK ++L H+EK+A+ +GL+ T P+RV KN RVC
Sbjct: 751 KRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVC 810
Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
DCH A KY+S V GREI LRD RFHHF++G+CSCND W
Sbjct: 811 GDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 211/468 (45%), Gaps = 76/468 (16%)
Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
S T +L++C + F GK +H +++ +E + + N LIS+YS++ A VF+
Sbjct: 62 SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFE 121
Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
+M+ + D+++W+ +++ + +G +
Sbjct: 122 TMRRFG--------------------------------KRDVVSWSAMMACYGNNGRELD 149
Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNG-LDYDLYVGTSLM 574
+ + LG PN + V++A + + GR + G++++ G + D+ VG SL+
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 575 DMYVKND-CLQNAQEVFDNMKNRNIVAWNSLIS-----GYCFKGL----------FVNAK 618
DM+VK + +NA +VFD M N+V W +I+ G+ + + F + K
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 619 KMLN-------QMEEEEIKPDLVSWN-----------SLVSGY---SIWGQSKEALVIIH 657
L+ ++E + L SW SLV Y S G + +
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENY-RESLKFFIQM-QQEDIKPNSTTMSSLLQTCGG 715
M++ +V++WT+LI+G ++N N E++ F +M Q ++PN T SS + CG
Sbjct: 330 RMEDH----SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
L + GK++ K G ++ VA +I M+ KS ++ A+ F + K L S+N
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
+ G N ++A L E+ E A TF +LL+ N G + +G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 20/333 (6%)
Query: 188 LSCISSGFCFLNETNKFRCLSSVKSKHAQM--IKMGKIWNS--------DDMVKSLIFHY 237
L + SGF E++KF LSSV S A++ + +GK +S DD+ SL+ Y
Sbjct: 258 LDMVLSGF----ESDKFT-LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMY 312
Query: 238 LEF---GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRS 294
+ G K F S W++ + Y E + ++ E+ +G + +
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPN 372
Query: 295 RI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFS 353
+ K C L +G +V KRG + + ++++ + K +E A + F
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFH 413
+S+ ++ + +N + RN +E A KL E+ + T +L A VG+
Sbjct: 433 SLSE-KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
Query: 414 EGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYT 473
+G+QIH V+K L N VCN LISMYS+ ++ A+RVF+ M++ N+ SW SMI+ +
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 474 GLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
G+ FN+M ++P+ +T+ +LS
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 130/260 (50%), Gaps = 16/260 (6%)
Query: 558 ILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNA 617
ILR+ DL S +D+ + D ++ + V ++SL+ C +
Sbjct: 33 ILRHLNAGDLRGAVSALDLMAR-----------DGIRPMDSVTFSSLLKS-CIRARDFRL 80
Query: 618 KKMLN-QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLIS 676
K+++ ++ E +I+PD V +NSL+S YS G S +A + M+ G +VV+W+++++
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSWSAMMA 139
Query: 677 GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNG-FI 735
N +++K F++ + + PN +++++ C + G+ +K G F
Sbjct: 140 CYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFE 199
Query: 736 KDAYVATGLIDMYSKSGN-LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
D V LIDM+ K N ++A +VF K + + +W MI G +EAI F +
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 795 LLETGFQPDAITFTALLAAC 814
++ +GF+ D T +++ +AC
Sbjct: 260 MVLSGFESDKFTLSSVFSAC 279
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 674 LISGSLQNENYRESLKFFIQMQQEDIKP-NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
LI L + R ++ M ++ I+P +S T SSLL++C + GK +H ++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVF---RKSANKTLASWNCMIMGFAIYGNGKEAI 789
D+ + LI +YSKSG+ A +VF R+ + + SW+ M+ + G +AI
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 790 LLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
+F E LE G P+ +TA++ AC NS V G
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/855 (30%), Positives = 420/855 (49%), Gaps = 112/855 (13%)
Query: 293 RSRILTIILKLCTKLMAFWLGVE-VHASLIKRGFDFDV--------------HLKCA--- 334
RSR L + +L A +L V A +IK GFD D + A
Sbjct: 11 RSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKV 70
Query: 335 --------------LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
+++ + K DV SA LF + D + W ++ RN ++ A
Sbjct: 71 YDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPD-RTVVTWTILMGWYARNSHFDEA 129
Query: 381 IKLFREMQFSSAKAISR--TIVKMLQACAKVGAFHEGKQIHGYVLKSALESN--LSVCNC 436
KLFR+M SS+ + T +L C + Q+H + +K ++N L+V N
Sbjct: 130 FKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNV 189
Query: 437 LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD 496
L+ Y +L+LA +F+ + + D
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIP-----------------------------------EKD 214
Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
+T+N L++G+ G Y + L M+ G +P+ + S VL+AV L G++ H
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVN 616
+ G D VG ++D Y K+D + + +FD M + V++N +IS Y +
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 617 AKKMLNQME-------------EEEIKPDLVSW----------------------NSLVS 641
+ +M+ I +L S NSLV
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
Y+ +EA +I + V+WT+LISG +Q + LK F +M+ +++
Sbjct: 395 MYAKCEMFEEAELIFKSLPQR----TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRA 450
Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
+ +T +++L+ L GK++H +++G +++ + +GL+DMY+K G++K A +VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
+ ++ SWN +I A G+G+ AI F +++E+G QPD+++ +L AC + G VE
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
+G +YF +MS Y I P +HY+CM+DLLG+ G EA + MPF+PD +W ++L +
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 882 CRIHGHLEYAEIASRRLFKLEPC-NSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
CRIH + AE A+ +LF +E ++A Y M N+ A + WE V ++ +M E G+K V
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690
Query: 941 LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
+SW++++ +HVFS+ HP EI ++ L +E+++ GY PDT V QD+DE+ K
Sbjct: 691 PAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMK 750
Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
+ L H+E+LA+ + L+ T PI V+KN R C DCH A K +S + REI +RD +R
Sbjct: 751 IESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSR 810
Query: 1061 FHHFREGECSCNDCW 1075
FHHF EG CSC D W
Sbjct: 811 FHHFSEGVCSCGDYW 825
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 148/677 (21%), Positives = 274/677 (40%), Gaps = 120/677 (17%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL--HGKG 289
++I +++ GD +SA F R+ W+ L + + E +++ ++
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWT-ILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 290 VIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA--LMNFYGKCRDVES 347
+ T +L C + +VHA +K GFD + L + L+ Y + R ++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
A LF E+ + +D + +N +I ++ + +I LF +M+ S + T +L+A
Sbjct: 203 ACVLFEEIPE-KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
+ F G+Q+H + + + SV N ++ YS+++++ L TR+
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRV-LETRM-------------- 306
Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
LF++M + D +++N ++S + Y+ L R MQ +G
Sbjct: 307 ----------------LFDEMP----ELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
F + +L L L+ GR+ H L D L+VG SL+DMY K + + A+
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD--------------- 632
+F ++ R V+W +LISGY KGL K+ +M ++ D
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 633 --------------------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWT 672
+ S + LV Y+ G K+A+ + M + N V+W
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR----NAVSWN 522
Query: 673 SLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKN 732
+LIS N + ++ F +M + ++P+S ++ +L C G ++ G E
Sbjct: 523 ALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY------- 575
Query: 733 GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLF 792
++ ++ + K + CM+ G EA L
Sbjct: 576 ---------------------FQAMSPIYGITPKKK--HYACMLDLLGRNGRFAEAEKLM 612
Query: 793 HELLETGFQPDAITFTALLAAC---KNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDL 849
E+ F+PD I ++++L AC KN L E + SM + Y M ++
Sbjct: 613 DEM---PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK----LRDAAAYVSMSNI 665
Query: 850 LGKAGYLDEAWDFIRTM 866
AG ++ D + M
Sbjct: 666 YAAAGEWEKVRDVKKAM 682
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/665 (34%), Positives = 355/665 (53%), Gaps = 42/665 (6%)
Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
+ +H ++ L N S+ L+ Y+ + A +VFD + + N+ N MI SY
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
G+ +F M ++PD T+ C+L G+
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT----------------------- 155
Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
+ GR+ HG + GL L+VG L+ MY K L A+ V D M
Sbjct: 156 ------------IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI 655
R++V+WNSL+ GY F +A ++ +ME +I D + SL+ S + E ++
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS--NTTTENVMY 261
Query: 656 IHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGG 715
+ M ++V+W +I ++N E+++ + +M+ + +P++ +++S+L CG
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 716 LGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCM 775
L GK+IH + I + + LIDMY+K G L+ AR+VF ++ + SW M
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 776 IMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYN 835
I + G G +A+ LF +L ++G PD+I F LAAC ++GL+EEG F M+ Y
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 441
Query: 836 IIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIAS 895
I P +EH +CMVDLLG+AG + EA+ FI+ M +P+ +WGALLG+CR+H + +A+
Sbjct: 442 ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAA 501
Query: 896 RRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVF 955
+LF+L P S Y L+ N+ A + RWE+V +R+ M G+K S +++++I+H F
Sbjct: 502 DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561
Query: 956 SAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVY 1015
HP + EIY EL LV +MK+LGYVPD+ D++EE+K L H+EKLAIV+
Sbjct: 562 LVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVF 621
Query: 1016 GLMKTK-----SRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECS 1070
LM TK S IR+ KN R+C DCH AAK +S + REI +RD RFH FR G CS
Sbjct: 622 ALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCS 681
Query: 1071 CNDCW 1075
C D W
Sbjct: 682 CGDYW 686
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/544 (24%), Positives = 241/544 (44%), Gaps = 65/544 (11%)
Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
VH+ +I + L LM Y +DV SA K+F E+ + + ++ N +I + N
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE-RNVIIINVMIRSYVNNG 119
Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCN 435
+ +K+F M + + T +L+AC+ G G++IHG K L S L V N
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 436 CLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQP 495
L+SMY + L A V D M ++ SWNS++ Y D A + +M S +I
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239
Query: 496 D---------------------------------IITWNCLLSGHFTHGSYQNVLTLLRG 522
D +++WN ++ + + + L
Sbjct: 240 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
M++ GF P+ S++ VL A + L G++ HGYI R L +L + +L+DMY K C
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
L+ A++VF+NMK+R++V+W ++IS Y F G +A + +++++ + PD +++ + ++
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
S G +E M + I P + ++ + +E+ +F M E P
Sbjct: 420 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME---P 476
Query: 702 NSTTMSSLLQTC-----GGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
N +LL C +GLL K ++G+ YV L ++Y+K+G +
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY----YVL--LSNIYAKAGRWEE 530
Query: 757 AREV--------FRKSANKTLASWNCMIMGFAIYGNG--------KEAILLFHELLETGF 800
+ +K+ + N +I F + +E +L ++ E G+
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGY 590
Query: 801 QPDA 804
PD+
Sbjct: 591 VPDS 594
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 9/309 (2%)
Query: 250 FFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
FF +S W+ + Y V E +E++ + G + +T +L C A
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPV-EAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
LG ++H + ++ ++ L+ AL++ Y KC +E A +F + D + W +I
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS-RDVVSWTAMIS 383
Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALE 428
+ + +A+ LF ++Q S S V L AC+ G EG+ + +
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
L C++ + R K++ A R M + N W +++ + D+ +K
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 488 MNSSRIQPDIITWNCLLSGHFTH-GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
+ ++ P+ + LLS + G ++ V + M+S G + N + +V + +
Sbjct: 504 L--FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561
Query: 547 LLKYGRESH 555
L+ G SH
Sbjct: 562 LV--GDRSH 568
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis
thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 366/650 (56%), Gaps = 22/650 (3%)
Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
+ N+ N L+S Y +N +++ A +VFD M + N+ SW +++ Y G VDVA SLF K
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
M + + ++W +L G G + L + + + N + S++ E R+
Sbjct: 136 MP----EKNKVSWTVMLIGFLQDGRIDDACKLY---EMIPDKDNIARTSMIHGLCKEGRV 188
Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
RE I + + T+++ Y +N+ + +A+++FD M + V+W S++ G
Sbjct: 189 -DEARE----IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 608 YCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
Y G +A+++ M +KP +++ N+++SG G+ +A + MK N
Sbjct: 244 YVQNGRIEDAEELFEVMP---VKP-VIACNAMISGLGQKGEIAKARRVFDSMKER----N 295
Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
+W ++I +N E+L FI MQ++ ++P T+ S+L C L L +GK++H
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
++ F D YVA+ L+ MY K G L ++ +F + +K + WN +I G+A +G G+E
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 788 AILLFHELLETG-FQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCM 846
A+ +F E+ +G +P+ +TF A L+AC +G+VEEG K ++SM + + + P HY+CM
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 847 VDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNS 906
VD+LG+AG +EA + I +M +PDA +WG+LLG+CR H L+ AE +++L ++EP NS
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535
Query: 907 ANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGA-PHPAT 965
Y L+ N+ A RW DV LR M V+ SW +++ VH F+ G HP
Sbjct: 536 GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQ 595
Query: 966 GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
I L L +++ GY PD D+DEEEK L H+E+LA+ Y L+K P
Sbjct: 596 ESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIP 655
Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
IRV+KN RVCSDCHTA K +S V+ REI LRD RFHHFR GECSC D W
Sbjct: 656 IRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 20/259 (7%)
Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
S++ Y N ++A+++FD M +RNI++WN L+SGY G A+K+ + M E
Sbjct: 53 SMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER---- 108
Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
++VSW +LV GY G+ A + M N V+WT ++ G LQ+ ++ K +
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
+ +D + +S++ G + +EI + I + TG Y ++
Sbjct: 165 EMIPDKD----NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG----YGQN 216
Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
+ AR++F KT SW M+MG+ G ++A EL E I A++
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA----EELFEVMPVKPVIACNAMI 272
Query: 812 AACKNSGLVEEGWKYFDSM 830
+ G + + + FDSM
Sbjct: 273 SGLGQKGEIAKARRVFDSM 291
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 18/294 (6%)
Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTII 300
G+ A + F R+ A W + ++ +E G E+ E L+++ + +GV L I
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL-EALDLFILMQKQGVRPTFPTLISI 337
Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
L +C L + G +VHA L++ FD DV++ LM Y KC ++ + +F +D
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS-KD 396
Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIH 419
++WN II + E A+K+F EM S S K T V L AC+ G EG +I+
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 420 GYVLKSALESNLSV------CNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSY 472
++ES V C++ M R + A + DSM + + + W S++ +
Sbjct: 457 -----ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Query: 473 TGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQS 525
+DVA K+ I+P+ LLS + + G + +V L + M++
Sbjct: 512 RTHSQLDVAEFCAKKL--IEIEPENSGTYILLSNMYASQGRWADVAELRKLMKT 563
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
A+++ G+ ++ A ++F + + +D W +I + RN A+ LF MQ +
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKE-RNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
T++ +L CA + + H GKQ+H +++ + ++ V + L++MY + +L + +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-SSRIQPDIITWNCLLSGHFTHGS 512
FD ++ WNS+IS Y G + A +F +M S +P+ +T+ LS G
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 513 YQNVLTLLRGMQSL-GFRP 530
+ L + M+S+ G +P
Sbjct: 449 VEEGLKIYESMESVFGVKP 467
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1
Length = 704
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/711 (33%), Positives = 378/711 (53%), Gaps = 59/711 (8%)
Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
K++ + ++ L S C+ IS SR K+ A + FDS++ + SWNS++S Y
Sbjct: 2 KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSN 61
Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH------------FTHGSYQNVLT---LL 520
G A LF++M+ + ++++WN L+SG+ F +NV++ ++
Sbjct: 62 GLPKEARQLFDEMS----ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMV 117
Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELR-------LLKYGRESHGYILRNGLDY-DLYVGTS 572
+G G S+ + E+ L+ GR L + + D+ T+
Sbjct: 118 KGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN 177
Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
++ + + A+ +FD M+ RN+V W ++I+GY A+K+ M E+
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----T 233
Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP-------------------------- 666
VSW S++ GY++ G+ ++A M +
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 667 -NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
+ TW +I + E+L F QMQ++ ++P+ ++ S+L C L LQ G+++
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 726 HCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNG 785
H ++ F D YVA+ L+ MY K G L A+ VF + ++K + WN +I G+A +G G
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 786 KEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSC 845
+EA+ +FHE+ +G P+ +T A+L AC +G +EEG + F+SM + + + PT+EHYSC
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 846 MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
VD+LG+AG +D+A + I +M KPDAT+WGALLG+C+ H L+ AE+A+++LF+ EP N
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 906 SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAP-HPA 964
+ Y L+ ++ A ++W DV +R +M V SWI++ + VH+F+ G HP
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Query: 965 TGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA 1024
I L +++ GY PD V D+DEEEK L H+E+LA+ YGL+K
Sbjct: 594 QAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGV 653
Query: 1025 PIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
PIRV+KN RVC DCH A K +S V REI LRD RFHHF GECSC D W
Sbjct: 654 PIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 143/302 (47%), Gaps = 17/302 (5%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
++I + E G+ + A + F L R A W ++ YE G E+ E L+++ ++ +GV
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL-EALDLFAQMQKQGVR 328
Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
L IL +C L + G +VHA L++ FD DV++ LM Y KC ++ A +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
F S +D ++WN II + E A+K+F EM S T++ +L AC+ G
Sbjct: 389 FDRFSS-KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 412 FHEGKQIHGYVLKSALESNLSVC------NCLISMYSRNNKLELATRVFDSMK-DHNLSS 464
EG +I ++ES V +C + M R +++ A + +SM + +
Sbjct: 448 LEEGLEIF-----ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV 502
Query: 465 WNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG-HFTHGSYQNVLTLLRGM 523
W +++ + +D+A K+ + +PD LLS + + + +V + + M
Sbjct: 503 WGALLGACKTHSRLDLAEVAAKKLFEN--EPDNAGTYVLLSSINASRSKWGDVAVVRKNM 560
Query: 524 QS 525
++
Sbjct: 561 RT 562
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis
thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/645 (31%), Positives = 362/645 (56%), Gaps = 46/645 (7%)
Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
+I + + G + A +F+ + +P I WN ++ G+ + +Q+ L + MQ
Sbjct: 59 LIHASSSFGDITFARQVFDDLP----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
P+ + +L+A + L L+ GR H + R G D D++V L+ +Y K L +A+
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 588 EVFDNMK--NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG--- 642
VF+ + R IV+W +++S Y G + A ++ +QM + ++KPD V+ S+++
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 643 --------------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVT 670
Y+ GQ A ++ MK+ PN++
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLIL 290
Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
W ++ISG +N RE++ F +M +D++P++ +++S + C +G L+ + ++
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
++ + D ++++ LIDM++K G+++ AR VF ++ ++ + W+ MI+G+ ++G +EAI
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
L+ + G P+ +TF LL AC +SG+V EGW +F+ M+ D+ I P +HY+C++DLL
Sbjct: 411 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLL 469
Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
G+AG+LD+A++ I+ MP +P T+WGALL +C+ H H+E E A+++LF ++P N+ +Y
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Query: 911 LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
+ NL A + W+ V +R M E G+ + SW+++ + F HP EI
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 589
Query: 971 ELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIK 1030
++ + S +K+ G+V + D+++EE + L SH+E++AI YGL+ T P+R+ K
Sbjct: 590 QVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITK 649
Query: 1031 NTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
N R C +CH A K +S + REI +RD RFHHF++G CSC D W
Sbjct: 650 NLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 229/528 (43%), Gaps = 74/528 (14%)
Query: 208 SSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLED 267
+ +K HA+++ +G + S ++ LI FGD T A + F W++ +
Sbjct: 35 AQLKQIHARLLVLG-LQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93
Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
Y S Q+ L ++ + V S +LK C+ L +G VHA + + GFD
Sbjct: 94 Y-SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA 152
Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKWENAIKLFRE 386
DV ++ L+ Y KCR + SA +F + E ++ W I+ +N + A+++F +
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 387 MQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNK 446
M+ K +V +L A + +G+ IH V+K LE + L +MY++ +
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 447 LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
+ A +FD MK NL WN+MIS Y GY A +F++M + ++PD I
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI-------- 324
Query: 507 HFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
S++ + A ++ L+ R + Y+ R+ D
Sbjct: 325 ---------------------------SITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
+++ ++L+DM+ K ++ A+ VFD +R++V W+++I GY G
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG-------------- 403
Query: 627 EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRE 686
+++EA+ + M+ G++PN VT+ L+ + RE
Sbjct: 404 ---------------------RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 687 SLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE-IHCLCLKNG 733
FF +M I P + ++ G G L E I C+ ++ G
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis
thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/672 (35%), Positives = 359/672 (53%), Gaps = 79/672 (11%)
Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
+ GL Y A S+F + +P+++ WN + GH + L L M SLG PN
Sbjct: 81 FEGLPY---AISVFKTIQ----EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQ------- 584
+ VL++ + + K G++ HG++L+ G D DLYV TSL+ MYV+N L+
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 585 ------------------------NAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
NAQ++FD + +++V+WN++ISGY G + A ++
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 621 LNQMEEEEIKPD------LVS----------------W-------------NSLVSGYSI 645
M + ++PD +VS W N+L+ YS
Sbjct: 254 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 313
Query: 646 WGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTT 705
G+ + A + + Y +V++W +LI G Y+E+L F +M + PN T
Sbjct: 314 CGELETACGLFERLP----YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 706 MSSLLQTCGGLGLLQNGKEIHCLCLK--NGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
M S+L C LG + G+ IH K G + + T LIDMY+K G++++A +VF
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
+K+L+SWN MI GFA++G + LF + + G QPD ITF LL+AC +SG+++ G
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
F +M+ DY + P +EHY CM+DLLG +G EA + I M +PD IW +LL +C+
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 884 IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
+HG++E E + L K+EP N +Y L+ N+ A + RW +V + R +++ G+K V
Sbjct: 550 MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609
Query: 944 SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
S I+ID +VH F HP EIY L + ++K G+VPDT V Q+++EE K
Sbjct: 610 SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGA 669
Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
L H+EKLAI +GL+ TK + ++KN RVC +CH A K +S + REI RD RFHH
Sbjct: 670 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 729
Query: 1064 FREGECSCNDCW 1075
FR+G CSCND W
Sbjct: 730 FRDGVCSCNDYW 741
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 229/507 (45%), Gaps = 84/507 (16%)
Query: 177 PPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLI-F 235
PP D++ LS + + + L S++ HAQMIK+G + N++ + LI F
Sbjct: 26 PPYDSIRNHPSLSLL----------HNCKTLQSLRIIHAQMIKIG-LHNTNYALSKLIEF 74
Query: 236 HYL--EFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFR 293
L F A F + W++ + + + L+++ + G++
Sbjct: 75 CILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH-ALSSDPVSALKLYVCMISLGLLPN 133
Query: 294 SRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFY---GKCRD------ 344
S +LK C K AF G ++H ++K G D D+++ +L++ Y G+ D
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 345 ----------------------VESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
+E+A KLF E+ ++D + WN +I ++ A++
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP-VKDVVSWNAMISGYAETGNYKEALE 252
Query: 383 LFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYS 442
LF++M ++ + T+V ++ ACA+ G+ G+Q+H ++ SNL + N LI +YS
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 443 RNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNC 502
+ +LE A +F+ + ++ SWN++I YT + A LF +M S
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS----------- 361
Query: 503 LLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILR-- 560
G PN ++ +L A L + GR H YI +
Sbjct: 362 ------------------------GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKM 620
G+ + TSL+DMY K ++ A +VF+++ ++++ +WN++I G+ G + +
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 621 LNQMEEEEIKPDLVSWNSLVSGYSIWG 647
++M + I+PD +++ L+S S G
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSG 484
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis
thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 278/922 (30%), Positives = 458/922 (49%), Gaps = 82/922 (8%)
Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDY----ESFGGEVQELLEVWGE 284
++ +LI Y + G T A + F R W+S L Y E +Q+ ++
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 285 LHGKGVIFRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
L + V++ SR+ L+ +LKLC W H K G D D + AL+N Y K
Sbjct: 136 LR-QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKL---FREMQFSSAKAISRTIV 400
V+ LF E+ D +LWN ++ L E AI L F + + R +
Sbjct: 195 KVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 401 KML---QACAKVGAFHEGKQIHGYV--------LKSALESNL--SVCNCLISMYSRNNK- 446
++ +V +F G L L S ++ C M + +
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 447 ------LELATRV-FDSMK--------------DHNLSSWNSMISSYTGLGYVDVAWSLF 485
L LAT V DS+ D L+ NS+I+ Y L A ++F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 486 NKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTEL 545
+ M+ + D+I+WN +++G +G + L + G +P+ +++ VL+A + L
Sbjct: 374 DNMS----ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 546 -RLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL 604
L ++ H + ++ D +V T+L+D Y +N C++ A+ +F+ N ++VAWN++
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAM 488
Query: 605 ISGYCFKGLFVNAKKMLNQMEEEEIKPD-------------LVSWN--------SLVSGY 643
++GY K+ M ++ + D L + N ++ SGY
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 644 --SIWGQSK--EALVIIHHMK------NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
+W S + V M +S P+ V WT++ISG ++N + F Q
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
M+ + P+ T+++L + L L+ G++IH LK D +V T L+DMY+K G+
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAA 813
+ A +F++ + +WN M++G A +G GKE + LF ++ G +PD +TF +L+A
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 814 CKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDAT 873
C +SGLV E +K+ SM DY I P IEHYSC+ D LG+AG + +A + I +M + A+
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788
Query: 874 IWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMD 933
++ LL +CR+ G E + + +L +LEP +S+ Y L+ N+ A +++W++++ R M
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848
Query: 934 EVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQ 993
VK +SWI++ +H+F + + T IY ++ ++ ++K+ GYVP+T
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908
Query: 994 DIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREI 1053
D++EEEK + L H+EKLA+ +GL+ T PIRVIKN RVC DCH A KY++ V REI
Sbjct: 909 DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968
Query: 1054 FLRDGARFHHFREGECSCNDCW 1075
LRD RFH F++G CSC D W
Sbjct: 969 VLRDANRFHRFKDGICSCGDYW 990
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 155/646 (23%), Positives = 287/646 (44%), Gaps = 75/646 (11%)
Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
LG HA ++ + + L L++ Y KC + A ++F ++ D D + WN I+
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-RDLVSWNSILAAY 115
Query: 372 LRN-----EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSA 426
++ E + A LFR ++ T+ ML+ C G + HGY K
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
L+ + V L+++Y + K++ +F+ M ++ WN M+ +Y +G+ + A L +
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 487 KMNSSRIQPDIITWNCL----------------------------------LSGHFTHGS 512
+SS + P+ IT L LS + G
Sbjct: 236 AFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ 295
Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
Y +L M + + ++L ++ L G++ H L+ GLD L V S
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
L++MY K A+ VFDNM R++++WNS+I+G GL V A + Q+ +KPD
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 633 -------LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYP------------------- 666
L + +SL G S+ Q + I+++ +S +
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 667 -----NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQN 721
++V W ++++G Q+ + ++LK F M ++ + + T++++ +TCG L +
Sbjct: 476 ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 722 GKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAI 781
GK++H +K+G+ D +V++G++DMY K G++ +A+ F +W MI G
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 782 YGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWK-YFDSMSTDYNIIPTI 840
G + A +F ++ G PD T L A +E+G + + +++ + P +
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV 655
Query: 841 EHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
+ +VD+ K G +D+A+ + + + T W A+L HG
Sbjct: 656 G--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHG 698
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 122/333 (36%), Gaps = 94/333 (28%)
Query: 524 QSLGFRPNG-SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
Q GF N +S ++L T R+L + +++ N L+ MY K
Sbjct: 41 QWFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINN-----------LISMYSKCGS 89
Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKG------------LFVNAKKMLNQMEEEEIK 630
L A+ VFD M +R++V+WNS+++ Y LF ++ + +
Sbjct: 90 LTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLS 149
Query: 631 PDL-------VSWNS---------------------LVSGYSIWGQSKEALVIIHHMKNS 662
P L W S LV+ Y +G+ KE V+ M
Sbjct: 150 PMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP-- 207
Query: 663 GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
Y +VV W ++ L+ E++ + PN T+ L + G
Sbjct: 208 --YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD------- 258
Query: 723 KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE-VFRKSANKTLASWNCMIMGFAI 781
DA G + ++ + S E +FR NK L+ +
Sbjct: 259 ------------DSDA----GQVKSFANGNDASSVSEIIFR---NKGLSEY--------- 290
Query: 782 YGNGKEAILL--FHELLETGFQPDAITFTALLA 812
+G+ + LL F +++E+ + D +TF +LA
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLA 323
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis
thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 282/906 (31%), Positives = 439/906 (48%), Gaps = 102/906 (11%)
Query: 222 KIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEV 281
++ N D + +I Y G + F S++ W++ + Y S E+LE
Sbjct: 115 RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY-SRNELYDEVLET 173
Query: 282 WGELHGKGVIFRSRIL-TIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYG 340
+ E+ + ++K C + +G+ VH ++K G DV + AL++FYG
Sbjct: 174 FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233
Query: 341 KCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI----S 396
V A +LF ++ + + WN +I V N E + L EM +
Sbjct: 234 THGFVTDALQLF-DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292
Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDS 456
T+V +L CA+ GK +HG+ +K L+ L + N L+ MYS+ + A +F
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 352
Query: 457 MKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNV 516
+ N+ SWN+M+ ++ G THG++
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGD-------------------------------THGTFD-- 379
Query: 517 LTLLRGMQSLGFRPNGSSVSVVLQAVT---ELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
+LR M + G V+ +L AV L +E H Y L+ Y+ V +
Sbjct: 380 --VLRQMLAGGEDVKADEVT-ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436
Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC----------------FKGLFVNA 617
+ Y K L AQ VF ++++ + +WN+LI G+ GL ++
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496
Query: 618 -------------------KKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
K++ + ++ DL + S++S Y G+ +
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556
Query: 659 MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
M++ ++V+W ++I+G LQN +L F QM I+ +M + C L
Sbjct: 557 MEDK----SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
L+ G+E H LK+ DA++A LIDMY+K+G++ + +VF K+ ASWN MIMG
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIP 838
+ I+G KEAI LF E+ TG PD +TF +L AC +SGL+ EG +Y D M + + + P
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 839 TIEHYSCMVDLLGKAGYLDEAWDFI-RTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
++HY+C++D+LG+AG LD+A + M + D IW +LL SCRIH +LE E + +
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 898 LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
LF+LEP NY L+ NL A +WEDV ++R M+E+ ++ SWI++++ V F
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF-- 850
Query: 958 EGAPHPATGEIYFELYHLVS------EMK--KLGYVPDTRCVYQDIDEEEKGKVLLSHTE 1009
GE + + + + EMK K+GY PDT V D+ EEEK + L H+E
Sbjct: 851 ------VVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 904
Query: 1010 KLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGEC 1069
KLA+ YGL+KT IRV KN R+C DCH AAK +S V REI +RD RFHHF+ G C
Sbjct: 905 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVC 964
Query: 1070 SCNDCW 1075
SC D W
Sbjct: 965 SCGDYW 970
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 141/598 (23%), Positives = 245/598 (40%), Gaps = 123/598 (20%)
Query: 402 MLQACAKVGAFHEGKQIHGYVLKSA-LESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
+LQA K G++IH V S L ++ +C +I+MY+ + + VFD+++
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 461 NLSSWNSMISSYT------------------------------------GLGYVDVAWSL 484
NL WN++ISSY+ G+ V + ++
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 485 FNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG----------FRPNG-- 532
+ + + D+ N L+S + THG + L L M F NG
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 533 -----------------------SSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYV 569
+++ VL R + G+ HG+ ++ LD +L +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 570 GTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE--E 627
+LMDMY K C+ NAQ +F N+N+V+WN+++ G+ +G +L QM E
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 628 EIKPDLVS-----------------------------------WNSLVSGYSIWGQSKEA 652
++K D V+ N+ V+ Y+ G A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 653 LVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
+ H +++ V +W +LI G Q+ + R SL +QM+ + P+S T+ SLL
Sbjct: 450 QRVFHGIRSK----TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 713 CGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
C L L+ GKE+H ++N +D +V ++ +Y G L + + +F +K+L SW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 773 NCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK---NSGLVEEGWKY-FD 828
N +I G+ G A+ +F +++ G Q I+ + AC + L E Y
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
+ D I ++D+ K G + ++ + K A+ W A++ IHG
Sbjct: 626 HLLEDDAFIAC-----SLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 677
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 145/617 (23%), Positives = 258/617 (41%), Gaps = 90/617 (14%)
Query: 214 HAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
H ++K G + D V +L+ Y G T A + F + R+ W+S + + S
Sbjct: 210 HGLVVKTGLV--EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF-SDN 266
Query: 273 GEVQELLEVWGEL---HGKGVIFRS-RILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD 328
G +E + GE+ +G G L +L +C + LG VH +K D +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 329 VHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
+ L ALM+ Y KC + +A +F ++++ ++ + WN ++ + R+M
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 389 FS--SAKAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMY 441
KA TI+ + C FHE K++H Y LK N V N ++ Y
Sbjct: 386 AGGEDVKADEVTILNAVPVC-----FHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
++ L A RVF ++ ++SWN++I + + N R+ D
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA-------------QSNDPRLSLD----- 482
Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
H M+ G P+ +V +L A ++L+ L+ G+E HG+I+RN
Sbjct: 483 ----AHLQ-------------MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525
Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
L+ DL+V S++ +Y+ L Q +FD M+++++V+WN++I+GY G A +
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585
Query: 622 NQMEEEEIKPDLVSWNSLVSGYSI-----WGQSKEALVIIH---------------HMKN 661
QM I+ +S + S+ G+ A + H + KN
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 662 SGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
I + +W ++I G + +E++K F +MQ+ P+ T +L
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 711 QTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK--SANK 767
C GL+ G + + + G + +IDM ++G L A V + S
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 768 TLASWNCMIMGFAIYGN 784
+ W ++ I+ N
Sbjct: 766 DVGIWKSLLSSCRIHQN 782
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 161/331 (48%), Gaps = 14/331 (4%)
Query: 207 LSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLE 266
L S+K H +K ++N + + + + Y + G + A + F S++ W++ +
Sbjct: 411 LPSLKELHCYSLKQEFVYN-ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI- 468
Query: 267 DYESFGGEVQE-----LLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLI 321
GG Q L+ ++ G++ S + +L C+KL + LG EVH +I
Sbjct: 469 -----GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Query: 322 KRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAI 381
+ + D+ + ++++ Y C ++ + LF + D + + WN +I L+N + A+
Sbjct: 524 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVITGYLQNGFPDRAL 582
Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
+FR+M + +++ + AC+ + + G++ H Y LK LE + + LI MY
Sbjct: 583 GVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMY 642
Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
++N + +++VF+ +K+ + +SWN+MI Y G A LF +M + PD +T+
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 502 CLLSGHFTHGSYQNVLTLLRGMQ-SLGFRPN 531
+L+ G L L M+ S G +PN
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 733
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis
thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/734 (32%), Positives = 364/734 (49%), Gaps = 80/734 (10%)
Query: 348 ANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACA 407
A +FS + + +++N + R+ + I ++ ++ + + + +L+A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 408 KVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS 467
KV A EG ++HG K A + V + MY+ ++ A VFD M ++ +WN+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
MI Y G VD A+ LF +M S + PD + ++S G+
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN--------------- 227
Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
++Y R + +++ N + D ++ T+L+ MY C+ A+
Sbjct: 228 --------------------MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 588 EVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG 647
E F M RN+ +++SGY G +A+ + +Q E K DLV W +++S Y
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE----KKDLVCWTTMISAYVESD 323
Query: 648 QSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMS 707
+EAL + M SGI P+VV+ S+IS
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISA------------------------------ 353
Query: 708 SLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK 767
C LG+L K +H NG + + LI+MY+K G L + R+VF K +
Sbjct: 354 -----CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 768 TLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYF 827
+ SW+ MI +++G +A+ LF + + +P+ +TF +L C +SGLVEEG K F
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
Query: 828 DSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGH 887
SM+ +YNI P +EHY CMVDL G+A L EA + I +MP + IWG+L+ +CRIHG
Sbjct: 469 ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
Query: 888 LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQ 947
LE + A++R+ +LEP + LM N+ A RWEDV +R M+E V S I
Sbjct: 529 LELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588
Query: 948 IDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSH 1007
+ H F H + EIY +L +VS++K GYVPD V D++EEEK ++L H
Sbjct: 589 QNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWH 648
Query: 1008 TEKLAIVYGLM------KTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
+EKLA+ +GLM + S IR++KN RVC DCH K +S V REI +RD RF
Sbjct: 649 SEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRF 708
Query: 1062 HHFREGECSCNDCW 1075
H ++ G CSC D W
Sbjct: 709 HCYKNGLCSCRDYW 722
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 201/425 (47%), Gaps = 9/425 (2%)
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
ILK +K+ A + G+E+H K D ++ M+ Y C + A +F E+S
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH-R 175
Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
D + WN +I R + A KLF EM+ S+ + ++ AC + G + I+
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
+++++ + + + L++MY+ +++A F M NL +M+S Y+ G +D
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
A +F++ + D++ W ++S + Q L + M G +P+ S+ V+
Sbjct: 296 DAQVIFDQTE----KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
A L +L + H I NGL+ +L + +L++MY K L ++VF+ M RN+V
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM 659
+W+S+I+ G +A + +M++E ++P+ V++ ++ G S G +E I M
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Query: 660 KNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
+ I P + + ++ + RE+L+ M + N SL+ C G
Sbjct: 472 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP---VASNVVIWGSLMSACRIHGE 528
Query: 719 LQNGK 723
L+ GK
Sbjct: 529 LELGK 533
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis
thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/676 (35%), Positives = 346/676 (51%), Gaps = 79/676 (11%)
Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
+Q+C + GKQ+H ++ S S+ +CN L+SMYS+ A V+ M+ N
Sbjct: 51 IQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNY 110
Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPD--IITWNCLLSGHFTHGSYQNVLTLL 520
S N +I+ Y G + A +F++M PD + TWN +++G + L+L
Sbjct: 111 MSSNILINGYVRAGDLVNARKVFDEM------PDRKLTTWNAMIAGLIQFEFNEEGLSLF 164
Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
R M LGF P+ ++ V LR + G++ HGY ++ GL+ DL V +SL MY++N
Sbjct: 165 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 224
Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
LQ+ + V +M RN+VAWN+LI G NA+
Sbjct: 225 GKLQDGEIVIRSMPVRNLVAWNTLIMG--------NAQN--------------------- 255
Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
G + L + MK SG PN +T+ +++S
Sbjct: 256 ------GCPETVLYLYKMMKISGCRPNKITFVTVLS------------------------ 285
Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
+C L + G++IH +K G V + LI MYSK G L A +
Sbjct: 286 -----------SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKA 334
Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGL 819
F + ++ W+ MI + +G G EAI LF+ + E T + + + F LL AC +SGL
Sbjct: 335 FSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGL 394
Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
++G + FD M Y P ++HY+C+VDLLG+AG LD+A IR+MP K D IW LL
Sbjct: 395 KDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLL 454
Query: 880 GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
+C IH + E A+ + + +++P +SA Y L+ N+ A + RW DV +R SM + VK
Sbjct: 455 SACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKK 514
Query: 940 VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
SW + VH F + EIY L L EMK GY PDT V D+DEEE
Sbjct: 515 EAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEE 574
Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
K L+ H+EKLA+ + LM APIR+IKN RVCSDCH A KY+S+++ REI LRDG+
Sbjct: 575 KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGS 634
Query: 1060 RFHHFREGECSCNDCW 1075
RFHHF G+CSC D W
Sbjct: 635 RFHHFINGKCSCGDYW 650
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 159/361 (44%), Gaps = 41/361 (11%)
Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
N S + +Q+ T + L G++ H ++ +G D ++ LM MY K +A V+
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
M+ +N ++ N LI+GY G VNA+K+ ++M + + L +WN++++G + ++
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRK----LTTWNAMIAGLIQFEFNE 158
Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
E L + M G P+ T S+ SGS
Sbjct: 159 EGLSLFREMHGLGFSPDEYTLGSVFSGS-------------------------------- 186
Query: 711 QTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLA 770
GL + G++IH +K G D V + L MY ++G L+ V R + L
Sbjct: 187 ---AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLV 243
Query: 771 SWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM 830
+WN +IMG A G + + L+ + +G +P+ ITF +L++C + + +G + +
Sbjct: 244 AWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ-IHAE 302
Query: 831 STDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEY 890
+ + S ++ + K G L +A D +W +++ + HG +
Sbjct: 303 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDE 361
Query: 891 A 891
A
Sbjct: 362 A 362
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 180/448 (40%), Gaps = 82/448 (18%)
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
++ + +KL F V V+ + K+ + L+N Y + D+ +A K+F E+ D
Sbjct: 85 LMSMYSKLGDFPSAVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPD-R 139
Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
WN +I ++ E E + LFREM T+ + A + + G+QIH
Sbjct: 140 KLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH 199
Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
GY +K LE +L V + L MY RN KL+ V SM NL +WN++I G +
Sbjct: 200 GYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPE 259
Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
L+ M S +P+ IT+ VL
Sbjct: 260 TVLYLYKMMKISGCRPNKITF-----------------------------------VTVL 284
Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
+ ++L + G++ H ++ G + V +SL+ MY K CL +A + F ++ + V
Sbjct: 285 SSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEV 344
Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEE------------------------------- 628
W+S+IS Y F G A ++ N M E+
Sbjct: 345 MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDM 404
Query: 629 ------IKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
KP L + +V G +A II M I ++V W +L+S ++
Sbjct: 405 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMP---IKTDIVIWKTLLSACNIHK 461
Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLL 710
N + + F ++ Q I PN + LL
Sbjct: 462 NAEMAQRVFKEILQ--IDPNDSACYVLL 487
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 204/472 (43%), Gaps = 57/472 (12%)
Query: 150 NTRTSINQNRHSHKPNSITNSPTSLALPPTDTLAKQAQLSC--ISSGFCFLNETNKFRC- 206
N R + + R + N+ +P + +L QL C + SGF ++KF C
Sbjct: 28 NLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGF----SSDKFICN 83
Query: 207 -LSSVKSK----HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYAD 260
L S+ SK + + G++ + M +++ + Y+ GD +A K F R
Sbjct: 84 HLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTT 143
Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
W++ + F +E L ++ E+HG G L + L + +G ++H
Sbjct: 144 WNAMIAGLIQFEFN-EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 202
Query: 321 IKRGFDFDVHLKCALMNFY---GKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKW 377
IK G + D+ + +L + Y GK +D E + + + + WN +IM +N
Sbjct: 203 IKYGLELDLVVNSSLAHMYMRNGKLQDGE----IVIRSMPVRNLVAWNTLIMGNAQNGCP 258
Query: 378 ENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
E + L++ M+ S + T V +L +C+ + +G+QIH +K S ++V + L
Sbjct: 259 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSL 318
Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM-NSSRIQPD 496
ISMYS+ L A + F +D + W+SMIS+Y G D A LFN M + ++ +
Sbjct: 319 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 378
Query: 497 IITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHG 556
+ + L LL G + G L L E +G
Sbjct: 379 EVAF----------------LNLLYACSHSGLKDKG------------LELFDMMVEKYG 410
Query: 557 YILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR-NIVAWNSLISG 607
+ + GL + T ++D+ + CL A+ + +M + +IV W +L+S
Sbjct: 411 F--KPGLKH----YTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 37/250 (14%)
Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
+S + P V + I+ N RE+ + F + +I N++ + +Q+C L
Sbjct: 6 SSVVRPLSVDPATAIATLCSKGNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLP 61
Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSK------------------------------ 750
+GK++HCL + +GF D ++ L+ MYSK
Sbjct: 62 SGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYV 121
Query: 751 -SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
+G+L +AR+VF + ++ L +WN MI G + +E + LF E+ GF PD T +
Sbjct: 122 RAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGS 181
Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
+ + V G + + Y + + S + + + G L + IR+MP +
Sbjct: 182 VFSGSAGLRSVSIGQQ-IHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR 240
Query: 870 PDATIWGALL 879
+ W L+
Sbjct: 241 -NLVAWNTLI 249
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835, mitochondrial
OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/658 (34%), Positives = 358/658 (54%), Gaps = 55/658 (8%)
Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNS-MISSYTGLGYVD 479
Y+ K + + + N +I+ R+ ++ A RVF M+ N +WNS +I +
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
A LF+++ +PD ++N +LS + + +++ + M F+ S
Sbjct: 111 EAHQLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP---FKDAAS------ 157
Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
+++ Y + ++ A+E+F +M +N V
Sbjct: 158 ------------------------------WNTMITGYARRGEMEKARELFYSMMEKNEV 187
Query: 600 AWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--DLVSWNSLVSGYSIWGQSKEALVIIH 657
+WN++ISGY G A ++ P +V+W ++++GY ++K+ +
Sbjct: 188 SWNAMISGYIECGDLEKASHFF------KVAPVRGVVAWTAMITGYM---KAKKVELAEA 238
Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLG 717
K+ + N+VTW ++ISG ++N + LK F M +E I+PNS+ +SS L C L
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 718 LLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIM 777
LQ G++IH + K+ D T LI MY K G L A ++F K + +WN MI
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 778 GFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNII 837
G+A +GN +A+ LF E+++ +PD ITF A+L AC ++GLV G YF+SM DY +
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 838 PTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
P +HY+CMVDLLG+AG L+EA IR+MPF+P A ++G LLG+CR+H ++E AE A+ +
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478
Query: 898 LFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA 957
L +L N+A Y + N+ A NRWEDV R+R M E V V +SWI+I VH F +
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538
Query: 958 EGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGL 1017
HP I+ +L L +MK GY P+ +++EE+K K+LL H+EKLA+ +G
Sbjct: 539 SDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGC 598
Query: 1018 MKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
+K + I+V KN R+C DCH A K++S + REI +RD RFHHF++G CSC D W
Sbjct: 599 IKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 46/312 (14%)
Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
A++ Y K + VE A +F +++ ++ + WN +I + N + E+ +KLFR M +
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
S + L C+++ A G+QIH V KS L ++++ LISMY + +L A ++
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLL--------- 504
F+ MK ++ +WN+MIS Y G D A LF +M ++I+PD IT+ +L
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLV 401
Query: 505 -------------------SGHFT--------HGSYQNVLTLLRGMQSLGFRPNGSSVSV 537
H+T G + L L+R S+ FRP+ +
Sbjct: 402 NIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIR---SMPFRPHAAVFGT 458
Query: 538 VLQAVTELRLLKYGRESHGYILR-NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
+L A + ++ + +L+ N + YV L ++Y + ++ V MK
Sbjct: 459 LLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV--QLANIYASKNRWEDVARVRKRMKES 516
Query: 597 NIVAWNSLISGY 608
N+V + GY
Sbjct: 517 NVVK----VPGY 524
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 195/506 (38%), Gaps = 123/506 (24%)
Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
++ SD + N+II +R+ + A+++F M+ + + ++ + + +++
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111
Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
H+ + E + N ++S Y RN E A FD M + +SWN+MI+
Sbjct: 112 AHQ-------LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITG 164
Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPN 531
Y G ++ A LF M ++ + ++WN ++SG+ G + +
Sbjct: 165 YARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFK---------- 210
Query: 532 GSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFD 591
V +R + T+++ Y+K ++ A+ +F
Sbjct: 211 ----------VAPVR-------------------GVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 592 NMK-NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP------------------- 631
+M N+N+V WN++ISGY + K+ M EE I+P
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 632 ----------------DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
D+ + SL+S Y G+ +A + MK +VV W ++I
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMI 357
Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
SG Q+ N ++L F +M I+P+ T ++L C GL+ G + +
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG-----MAYFESMV 412
Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
+D Y D Y+ CM+ G +EA+ L +
Sbjct: 413 RD-YKVEPQPDHYT------------------------CMVDLLGRAGKLEEALKLIRSM 447
Query: 796 LETGFQPDAITFTALLAACKNSGLVE 821
F+P A F LL AC+ VE
Sbjct: 448 ---PFRPHAAVFGTLLGACRVHKNVE 470
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 247 AKAFF--LYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLC 304
A+A F + +++ W++ + Y ++ L+++ + +G+ S L+ L C
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVE-NSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 305 TKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLW 364
++L A LG ++H + K DV +L++ Y KC ++ A KLF EV +D + W
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF-EVMKKKDVVAW 353
Query: 365 NEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQ-IHGYVL 423
N +I ++ + A+ LFREM + + T V +L AC G + G V
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSM 457
+E C++ + R KLE A ++ SM
Sbjct: 414 DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis
thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 249/794 (31%), Positives = 385/794 (48%), Gaps = 120/794 (15%)
Query: 364 WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVL 423
WN +I N + LF M S + T + +AC ++ + G+ H L
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 424 KSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWS 483
+ SN+ V N L++MYSR L A +VFD M S W
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM-----SVW------------------ 191
Query: 484 LFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS-LGFRPNGSSVSVVLQAV 542
D+++WN ++ + G + L + M + G RP+ ++ VL
Sbjct: 192 ------------DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
L G++ H + + + + +++VG L+DMY K + A VF NM +++V+WN
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299
Query: 603 SLISGYCFKGLFVNAKKMLN-----------------------------------QMEEE 627
++++GY G F +A ++ QM
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 628 EIKPDLVSWNSLVSG---------------YSIW--------GQSKEALVI--------- 655
IKP+ V+ S++SG Y+I G E +VI
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419
Query: 656 ------IHHMKNSGIYP---NVVTWTSLISGSLQNENYRESLKFFIQMQQED--IKPNST 704
M +S + P +VVTWT +I G Q+ + ++L+ +M +ED +PN+
Sbjct: 420 CKKVDTARAMFDS-LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDA---YVATGLIDMYSKSGNLKSAREVF 761
T+S L C L L+ GK+IH L+N ++A +V+ LIDMY+K G++ AR VF
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQ--QNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
K +W ++ G+ ++G G+EA+ +F E+ GF+ D +T +L AC +SG+++
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
+G +YF+ M T + + P EHY+C+VDLLG+AG L+ A I MP +P +W A L
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 882 CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
CRIHG +E E A+ ++ +L + +Y L+ NL A + RW+DV R+R M GVK
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
Query: 942 VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKG 1001
SW++ + F HP EIY L + +K +GYVP+T D+D+EEK
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKD 776
Query: 1002 KVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARF 1061
+L H+EKLA+ YG++ T A IR+ KN RVC DCHTA YMS + +I LRD +RF
Sbjct: 777 DLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRF 836
Query: 1062 HHFREGECSCNDCW 1075
HHF+ G CSC W
Sbjct: 837 HHFKNGSCSCKGYW 850
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/674 (25%), Positives = 295/674 (43%), Gaps = 95/674 (14%)
Query: 202 NKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYAD- 260
+K + +S VK H +++ G + + ++ LI Y+ G + A + F S A
Sbjct: 36 HKCKTISQVKLIHQKLLSFGIL--TLNLTSHLISTYISVGCLSHAV-SLLRRFPPSDAGV 92
Query: 261 --WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHA 318
W+S + Y G + L ++G +H + + K C ++ + G HA
Sbjct: 93 YHWNSLIRSYGD-NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 319 SLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWE 378
+ GF +V + AL+ Y +CR + A K+F E+S + D + WN II + K +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS-VWDVVSWNSIIESYAKLGKPK 210
Query: 379 NAIKLFREMQFS-SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCL 437
A+++F M + + T+V +L CA +G GKQ+H + + S + N+ V NCL
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 438 ISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDI 497
+ MY++ ++ A VF +M ++ SWN+M++ Y+ +G + A LF KM +I+ D+
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 498 ITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGY 557
+TW+ +SG+ G L + R M S G +PN ++ VL + L +G+E H Y
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 558 IL-------RNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNM--KNRNIVAWNSLISGY 608
+ +NG + V L+DMY K + A+ +FD++ K R++V W +I GY
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 609 CFKGLFVNAKKMLNQMEEEEIK-------------------------------------- 630
G A ++L++M EE+ +
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 631 -PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLK 689
P VS N L+ Y+ G +A ++ +M + N VTWTSL++G + E+L
Sbjct: 511 VPLFVS-NCLIDMYAKCGSISDARLVFDNM----MAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
F +M++ K + T+ +L C G++ G E
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY------------------------ 601
Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
+ VF S + C++ G A+ L E+ +P + + A
Sbjct: 602 ----FNRMKTVFGVSPGPE--HYACLVDLLGRAGRLNAALRLIEEM---PMEPPPVVWVA 652
Query: 810 LLAACKNSGLVEEG 823
L+ C+ G VE G
Sbjct: 653 FLSCCRIHGKVELG 666
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 164/382 (42%), Gaps = 32/382 (8%)
Query: 158 NRHSHKPNSITNSPTSLALPPTDTLAKQA---QLSCISSGFCFLNETNKFRCLSSVKSKH 214
N +P++IT LPP +L + QL C + + CL + +K
Sbjct: 221 NEFGCRPDNIT---LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 215 AQMIKMGKIWNS---DDMVK--SLIFHYLEFGDFTSAAKAFFLY----FSRSYADWSSFL 265
M + ++++ D+V +++ Y + G F A + F WS+ +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGF 325
Y G E L V ++ G+ L +L C + A G E+H IK
Sbjct: 338 SGYAQ-RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 326 DF-------DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLL-WNEIIMVKLRNEKW 377
D + + L++ Y KC+ V++A +F +S E D++ W +I ++
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 378 ENAIKLFREM--QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES-NLSVC 434
A++L EM + + + TI L ACA + A GKQIH Y L++ + L V
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
NCLI MY++ + A VFD+M N +W S+++ Y GY + A +F++M +
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576
Query: 495 PD-----IITWNCLLSGHFTHG 511
D ++ + C SG G
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQG 598
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 130/310 (41%), Gaps = 44/310 (14%)
Query: 639 LVSGYSIWGQSKEALVIIHHM--KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQ 696
L+S Y G A+ ++ ++G+Y W SLI N + L F M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVY----HWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 697 EDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKS 756
P++ T + + CG + ++ G+ H L L GFI + +V L+ MYS+ +L
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 757 AREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL-ETGFQPDAITFTALLAACK 815
AR+VF + + + SWN +I +A G K A+ +F + E G +PD IT +L C
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 816 NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIW 875
+ G G K + +I + +C+VD+ K G +DEA M K D W
Sbjct: 241 SLGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSW 298
Query: 876 GALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEV 935
A++ Y++I R+ED RL M E
Sbjct: 299 NAMVAG--------YSQIG--------------------------RFEDAVRLFEKMQEE 324
Query: 936 GVK-SVLVWS 944
+K V+ WS
Sbjct: 325 KIKMDVVTWS 334
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 251/808 (31%), Positives = 408/808 (50%), Gaps = 88/808 (10%)
Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
++ ++ K G D+ + L++ + K + A K+F+++ + + + N + MV L
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGL-MVGLVR 286
Query: 375 EKW-ENAIKLFREMQFSSAKAISRTIVKMLQA-----CAKVGAFHEGKQIHGYVLKSAL- 427
+KW E A KLF +M S + V +L + A+ +G+++HG+V+ + L
Sbjct: 287 QKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 428 ESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNK 487
+ + + N L++MY++ + A RVF M D
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTD---------------------------- 377
Query: 488 MNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRL 547
D ++WN +++G +G + + + M+ P ++ L + L+
Sbjct: 378 -------KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
K G++ HG L+ G+D ++ V +LM +Y + L +++F +M + V+WNS+I
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 608 YCFKG--------LFVNAKKM---LNQME-------------------------EEEIKP 631
F+NA++ LN++ + I
Sbjct: 491 LARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIAD 550
Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
+ + N+L++ Y G+ I M + VTW S+ISG + NE ++L
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMAER---RDNVTWNSMISGYIHNELLAKALDLV 607
Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
M Q + +S +++L + L+ G E+H ++ D V + L+DMYSK
Sbjct: 608 WFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKC 667
Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL-LETGFQPDAITFTAL 810
G L A F + SWN MI G+A +G G+EA+ LF + L+ PD +TF +
Sbjct: 668 GRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGV 727
Query: 811 LAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
L+AC ++GL+EEG+K+F+SMS Y + P IEH+SCM D+LG+AG LD+ DFI MP KP
Sbjct: 728 LSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKP 787
Query: 871 DATIWGALLGS-CRIHGH-LEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERL 928
+ IW +LG+ CR +G E + A+ LF+LEP N+ NY L+ N+ A RWED+ +
Sbjct: 788 NVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKA 847
Query: 929 RHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDT 988
R M + VK +SW+ + VH+F A HP IY +L L +M+ GYVP T
Sbjct: 848 RKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQT 907
Query: 989 RCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRA-PIRVIKNTRVCSDCHTAAKYMSL 1047
D+++E K ++L H+EKLA+ + L +S PIR++KN RVC DCH+A KY+S
Sbjct: 908 GFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISK 967
Query: 1048 VRGREIFLRDGARFHHFREGECSCNDCW 1075
+ GR+I LRD RFHHF++G CSC+D W
Sbjct: 968 IEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 178/708 (25%), Positives = 307/708 (43%), Gaps = 86/708 (12%)
Query: 229 MVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGK 288
+ +LI YLE GD SA K F R+ W+ + Y S GE +E L ++ +
Sbjct: 38 LCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY-SRNGEHKEALVFLRDMVKE 96
Query: 289 GVIFRSRILTIILKLCTKL--MAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVE 346
G+ +L+ C ++ + G ++H + K + D + L++ Y KC +
Sbjct: 97 GIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC--IG 154
Query: 347 SANKLFSEVSDLE--DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML- 403
S D+E + + WN II V + +A ++F MQ+ ++ T ++
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 404 QACAKVGA-FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
AC+ +QI + KS L ++L V + L+S ++++ L A +VF+ M+ N
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSS-RIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
+ N ++ + + A LF MNS + P+ SY +L+
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE---------------SYVILLS--- 316
Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL-DYDLYVGTSLMDMYVKN 580
S ++ E LK GRE HG+++ GL D+ + +G L++MY K
Sbjct: 317 --------------SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP---DLVS-- 635
+ +A+ VF M +++ V+WNS+I+G G F+ A + M +I P L+S
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 636 -------W-----------------------NSLVSGYSIWGQSKEALVIIHHMKNSGIY 665
W N+L++ Y+ G E I M
Sbjct: 423 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH--- 479
Query: 666 PNVVTWTSLISGSLQNE-NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
+ V+W S+I ++E + E++ F+ Q+ K N T SS+L L + GK+
Sbjct: 480 -DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 725 IHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF-RKSANKTLASWNCMIMGFAIYG 783
IH L LKN +A LI Y K G + ++F R + + +WN MI G+
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
+A+ L +L+TG + D+ + +L+A + +E G + + S + +
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVG 657
Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYA 891
S +VD+ K G LD A F TMP + ++ W +++ HG E A
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEA 704
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 159/616 (25%), Positives = 269/616 (43%), Gaps = 84/616 (13%)
Query: 317 HASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK 376
H+ L K D DV+L L+N Y + D SA K+F E+ L + + W I+ RN +
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP-LRNCVSWACIVSGYSRNGE 82
Query: 377 WENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHE--GKQIHGYVLKSALESNLSVC 434
+ A+ R+M + V +L+AC ++G+ G+QIHG + K + + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 435 NCLISMYSRN-NKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
N LISMY + + A F ++ N SWNS+IS Y+ G A+ +F+ M
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRE 553
+P T+ L++ + ++RLL+ +
Sbjct: 203 RPTEYTFGSLVT------------------------------TACSLTEPDVRLLE---Q 229
Query: 554 SHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFK-- 611
I ++GL DL+VG+ L+ + K+ L A++VF+ M+ RN V N L+ G +
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289
Query: 612 -----GLFVNAKKMLNQMEE---------------EE-------------IKPDLVSW-- 636
LF++ M++ E EE I LV +
Sbjct: 290 GEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 637 ---NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQ 693
N LV+ Y+ G +A + + M + + V+W S+I+G QN + E+++ +
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTD----KDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 694 MQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGN 753
M++ DI P S T+ S L +C L + G++IH LK G + V+ L+ +Y+++G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 754 LKSAREVFRKSANKTLASWNCMIMGFAIYGNG-KEAILLFHELLETGFQPDAITFTALLA 812
L R++F SWN +I A EA++ F G + + ITF+++L+
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
A + E G K ++ NI + ++ GK G +D M + D
Sbjct: 526 AVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 873 TIWGALLGSCRIHGHL 888
W +++ S IH L
Sbjct: 585 VTWNSMI-SGYIHNEL 599
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 217/505 (42%), Gaps = 46/505 (9%)
Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
H +I G + + L+ Y + G A + F+ + W+S + + G
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395
Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
+ E +E + + ++ S L L C L LG ++H +K G D +V +
Sbjct: 396 FI-EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454
Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEK-WENAIKLFREMQFSSA 392
ALM Y + + K+FS + + D + WN II R+E+ A+ F Q +
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPE-HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ 513
Query: 393 KAISRTIVKMLQACAKVGAFHE-GKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
K ++R + + +F E GKQIHG LK+ + + N LI+ Y + +++
Sbjct: 514 K-LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 452 RVFDSMKDHNLS-SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
++F M + + +WNSMIS Y I +++
Sbjct: 573 KIFSRMAERRDNVTWNSMISGY--------------------IHNELLA----------- 601
Query: 511 GSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVG 570
L L+ M G R + + VL A + L+ G E H +R L+ D+ VG
Sbjct: 602 ----KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657
Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME-EEEI 629
++L+DMY K L A F+ M RN +WNS+ISGY G A K+ M+ + +
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 630 KPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESL 688
PD V++ ++S S G +E M +S G+ P + + S ++ L + L
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF-SCMADVLGRAGELDKL 776
Query: 689 KFFIQMQQEDIKPNSTTMSSLLQTC 713
+ FI ++ +KPN ++L C
Sbjct: 777 EDFI--EKMPMKPNVLIWRTVLGAC 799
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 215/533 (40%), Gaps = 100/533 (18%)
Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
+ +Q+C VG + H + K+ L+ ++ +CN LI+ Y A +VFD M
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
N SW C++SG+ +G ++ L
Sbjct: 65 RNCVSW-----------------------------------ACIVSGYSRNGEHKEALVF 89
Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLK--YGRESHGYILRNGLDYDLYVGTSLMDMY 577
LR M G N + VL+A E+ + +GR+ HG + + D V L+ MY
Sbjct: 90 LRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149
Query: 578 VKNDCLQN---AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP--- 631
K C+ + A F +++ +N V+WNS+IS Y G +A ++ + M+ + +P
Sbjct: 150 WK--CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEY 207
Query: 632 ----------------------------------DLVSWNSLVSGYSIWGQSKEALVIIH 657
DL + LVS ++ G A + +
Sbjct: 208 TFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267
Query: 658 HMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTM-------SSL 709
M+ N VT L+ G ++ + E+ K F+ M D+ P S + SL
Sbjct: 268 QMETR----NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKT 768
+ G L+ G+E+H + G + + GL++MY+K G++ AR VF +K
Sbjct: 324 AEEVG----LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 769 LASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
SWN MI G G EA+ + + P + T + L++C + + G +
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG-QQIH 438
Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
S I + + ++ L + GYL+E +MP + D W +++G+
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 175/396 (44%), Gaps = 22/396 (5%)
Query: 312 LGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVK 371
LG ++H +K + + AL+ YGKC +++ K+FS +++ D++ WN +I
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 372 LRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNL 431
+ NE A+ L M + + S +L A A V G ++H +++ LES++
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 432 SVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-S 490
V + L+ MYS+ +L+ A R F++M N SWNSMIS Y G + A LF M
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 491 SRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRP---NGSSVSVVLQAVTELR 546
+ PD +T+ +LS G + M S G P + S ++ VL EL
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774
Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLIS 606
L+ E + N L + +G K + + A E+ ++ N V + L +
Sbjct: 775 KLEDFIEKMP-MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 607 GYCFKGLFVNAKKMLNQMEEEEIKPDL-VSWNSLVSGYSIW----GQSKEALVII----- 656
Y G + + K +M++ ++K + SW ++ G ++ +A VI
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE 893
Query: 657 --HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKF 690
M+++G P T L+ EN E L +
Sbjct: 894 LNRKMRDAGYVPQ----TGFALYDLEQENKEEILSY 925
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/746 (31%), Positives = 370/746 (49%), Gaps = 85/746 (11%)
Query: 403 LQACAKVGAFHEG---KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD 459
++ C +GA ++ K IHG ++++ + N ++ Y+ A RVFD +
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 460 HNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTL 519
NL SWN+++ +Y+ G + S F K+ D +TWN L+ G+ G
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSG-------- 117
Query: 520 LRGMQSLGFRPNGSSVSVVLQAVTELRLLKY---------GRESHGYILRNGLDYDLYVG 570
L G + S L VT + +LK G++ HG +++ G + L VG
Sbjct: 118 LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 177
Query: 571 TSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSL-------------------------- 604
+ L+ MY C+ +A++VF + +RN V +NSL
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS 237
Query: 605 ----ISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVI----- 655
I G GL A + +M+ + +K D + S++ G E I
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 656 -----------------------IHHMK---NSGIYPNVVTWTSLISGSLQNENYRESLK 689
+H+ K + NVV+WT+++ G Q E++K
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 690 FFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYS 749
F+ MQ+ I P+ T+ + C + L+ G + H + +G I V+ L+ +Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 750 KSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTA 809
K G++ + +F + + SW M+ +A +G E I LF ++++ G +PD +T T
Sbjct: 418 KCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTG 477
Query: 810 LLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFK 869
+++AC +GLVE+G +YF M+++Y I+P+I HYSCM+DL ++G L+EA FI MPF
Sbjct: 478 VISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP 537
Query: 870 PDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLR 929
PDA W LL +CR G+LE + A+ L +L+P + A Y L+ ++ A +W+ V +LR
Sbjct: 538 PDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLR 597
Query: 930 HSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTR 989
M E VK SWI+ +H FSA+ P +IY +L L +++ GY PDT
Sbjct: 598 RGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTS 657
Query: 990 CVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVR 1049
V+ D++E K K+L H+E+LAI +GL+ S PIRV KN RVC DCH A K++S V
Sbjct: 658 FVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVT 717
Query: 1050 GREIFLRDGARFHHFREGECSCNDCW 1075
GREI +RD RFH F++G CSC D W
Sbjct: 718 GREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 232/525 (44%), Gaps = 79/525 (15%)
Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
L+ Y K + F ++ D D + WN +I + A+K + M +
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136
Query: 395 ISR-TIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
++R T++ ML+ + G GKQIHG V+K ES L V + L+ MY+ + A +V
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196
Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
F + D N +NS++ G ++ A LF M + D ++W ++ G +G
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLA 251
Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
+ + R M+ G + + VL A L + G++ H I+R +YVG++L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD- 632
+DMY K CL A+ VFD MK +N+V+W +++ GY G A K+ M+ I PD
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 633 ------------------------------LVSW----NSLVSGYSIWGQSKEALVIIHH 658
L+ + NSLV+ Y G ++ + +
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 659 MKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGL 718
M + V+WT+++S Q E+++ F +M Q +KP+ T++ ++ C GL
Sbjct: 432 MN----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 719 LQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMG 778
++ G+ L M S+ G + S + ++CMI
Sbjct: 488 VEKGQRYFKL------------------MTSEYGIVPS------------IGHYSCMIDL 517
Query: 779 FAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
F+ G +EA+ + + F PDAI +T LL+AC+N G +E G
Sbjct: 518 FSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIG 559
Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/523 (23%), Positives = 220/523 (42%), Gaps = 70/523 (13%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
+L+ Y + G + F R W+ +E Y S G V ++ + +
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGY-SLSGLVGAAVKAYNTMMRDFSA 135
Query: 292 FRSRI-LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
+R+ L +LKL + LG ++H +IK GF+ + + L+ Y + A K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 351 LFSEVSDL-----------------------------EDDLLWNEIIMVKLRNEKWENAI 381
+F + D +D + W +I +N + AI
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 382 KLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
+ FREM+ K +L AC +GA +EGKQIH ++++ + ++ V + LI MY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
+ L A VFD MK N+ SW +M+ Y G + A +F M S I PD
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD----- 370
Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
H+T G + A + L+ G + HG + +
Sbjct: 371 -----HYTLGQ-------------------------AISACANVSSLEEGSQFHGKAITS 400
Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
GL + + V SL+ +Y K + ++ +F+ M R+ V+W +++S Y G V ++
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460
Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQ 680
++M + +KPD V+ ++S S G ++ M + GI P++ ++ +I +
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520
Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGK 723
+ E+++F M P++ ++LL C G L+ GK
Sbjct: 521 SGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGK 560
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 151/325 (46%), Gaps = 33/325 (10%)
Query: 211 KSKHAQMIKMGKIWNSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYE 269
K H Q+IK+G + S +V S L++ Y G + A K F+ R+ ++S +
Sbjct: 159 KQIHGQVIKLG--FESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 270 SFG-----------------------------GEVQELLEVWGELHGKGVIFRSRILTII 300
+ G G +E +E + E+ +G+ +
Sbjct: 217 ACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 301 LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLED 360
L C L A G ++HA +I+ F +++ AL++ Y KC+ + A +F + ++
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ-KN 335
Query: 361 DLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHG 420
+ W +++ + + E A+K+F +MQ S T+ + + ACA V + EG Q HG
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 421 YVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDV 480
+ S L ++V N L+++Y + ++ +TR+F+ M + SW +M+S+Y G
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 481 AWSLFNKMNSSRIQPDIITWNCLLS 505
LF+KM ++PD +T ++S
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVIS 480
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 126/272 (46%), Gaps = 7/272 (2%)
Query: 256 RSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVE 315
++ W++ + Y G +E ++++ ++ G+ L + C + + G +
Sbjct: 334 KNVVSWTAMVVGYGQTG-RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
H I G V + +L+ YGKC D++ + +LF+E+ ++ D + W ++ +
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQFG 451
Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVC 434
+ I+LF +M K T+ ++ AC++ G +G++ + + ++
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 435 NCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA-WSLFNKMNSSR 492
+C+I ++SR+ +LE A R + M + W +++S+ G +++ W+ + +
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
P + L S + + G + +V L RGM+
Sbjct: 572 HHP--AGYTLLSSIYASKGKWDSVAQLRRGMR 601
Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 13/241 (5%)
Query: 703 STTMSSLLQTCGGLGLLQNG---KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
S S ++ C GLG K IH ++ + ++ ++ Y+ + AR
Sbjct: 3 SNYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARR 62
Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
VF + L SWN +++ ++ G E F +L + D +T+ L+ SGL
Sbjct: 63 VFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGL 118
Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDF---IRTMPFKPDATIWG 876
V K +++M D++ T M+ L G++ + + F+ +
Sbjct: 119 VGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS 178
Query: 877 ALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
LL ++ ++ A + + L+ N+ YN +M L ED +L M++
Sbjct: 179 PLL---YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS 235
Query: 937 V 937
V
Sbjct: 236 V 236
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis
thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/675 (34%), Positives = 350/675 (51%), Gaps = 77/675 (11%)
Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKD-HN 461
LQ C+K E KQIH +LK+ L M+D +
Sbjct: 21 LQRCSKQ---EELKQIHARMLKTGL-----------------------------MQDSYA 48
Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
++ + S S T ++ A +F+ + +PD WN ++ G + L L +
Sbjct: 49 ITKFLSFCISSTSSDFLPYAQIVFDGFD----RPDTFLWNLMIRGFSCSDEPERSLLLYQ 104
Query: 522 GMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKND 581
M N + +L+A + L + + H I + G + D+Y
Sbjct: 105 RMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY------------- 151
Query: 582 CLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS 641
A NSLI+ Y G F A + +++ E PD VSWNS++
Sbjct: 152 ------------------AVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIK 189
Query: 642 GYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
GY G+ AL + M N ++WT++ISG +Q + +E+L+ F +MQ D++P
Sbjct: 190 GYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
++ ++++ L C LG L+ GK IH K D+ + LIDMY+K G ++ A EVF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVE 821
+ K++ +W +I G+A +G+G+EAI F E+ + G +P+ ITFTA+L AC +GLVE
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 822 EGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGS 881
EG F SM DYN+ PTIEHY C+VDLLG+AG LDEA FI+ MP KP+A IWGALL +
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 882 CRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVL 941
CRIH ++E E L ++P + Y N+ AM +W+ R M E GV V
Sbjct: 426 CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485
Query: 942 VWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQD-IDEEEK 1000
S I ++ H F A HP +I + + ++++ GYVP+ + D +D++E+
Sbjct: 486 GCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDER 545
Query: 1001 GKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGAR 1060
++ H+EKLAI YGL+KTK IR++KN RVC DCH K +S + R+I +RD R
Sbjct: 546 EAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTR 605
Query: 1061 FHHFREGECSCNDCW 1075
FHHFR+G+CSC D W
Sbjct: 606 FHHFRDGKCSCGDYW 620
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 216/417 (51%), Gaps = 16/417 (3%)
Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL-FSEVS----DLEDDLLWNEIIM 369
++HA ++K G D + A+ F C S++ L ++++ D D LWN +I
Sbjct: 32 QIHARMLKTGLMQDSY---AITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
+++ E ++ L++ M SSA + T +L+AC+ + AF E QIH + K E+
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
++ N LI+ Y+ +LA +FD + + + SWNS+I Y G +D+A +LF KM
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM- 207
Query: 490 SSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLK 549
+ + I+W ++SG+ + L L MQ+ P+ S++ L A +L L+
Sbjct: 208 ---AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 550 YGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC 609
G+ H Y+ + + D +G L+DMY K ++ A EVF N+K +++ AW +LISGY
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 610 FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIYPNV 668
+ G A +M++ IKP+++++ ++++ S G +E +I + M ++ + P +
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 669 VTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
+ ++ L + K FI Q+ +KPN+ +LL+ C ++ G+EI
Sbjct: 385 EHYGCIVD-LLGRAGLLDEAKRFI--QEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 156/331 (47%), Gaps = 37/331 (11%)
Query: 210 VKSKHAQMIKMGKIWNSDDMVKSLIFHYLEFG-DFTSAAKAFFLYFSRSYAD-WSSFLED 267
+K HA+M+K G + +S + K L F DF A+ F F R W+ +
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 268 YESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF 327
+ S E + L ++ + + +LK C+ L AF ++HA + K G++
Sbjct: 90 F-SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFR-- 385
DV+ +L+N Y + + A+ LF + + DD+ WN +I ++ K + A+ LFR
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPE-PDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 386 -----------------------------EMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
EMQ S + + ++ L ACA++GA +GK
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 417 QIHGYVLKSALESNLSVCNC-LISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
IH Y+ K+ + + SV C LI MY++ ++E A VF ++K ++ +W ++IS Y
Sbjct: 268 WIHSYLNKTRIRMD-SVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
G+ A S F +M I+P++IT+ +L+
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis
thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 332/580 (57%), Gaps = 39/580 (6%)
Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
N + V +LQ + + HG I+R L+ D+ + L++ Y K ++ A++VF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG-------- 642
D M R++V+WN++I Y + A + +M E K + +S++S
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 643 ---------------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLI 675
Y+ G K+A+ + M++ + VTW+S++
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK----SSVTWSSMV 235
Query: 676 SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFI 735
+G +QN+NY E+L + + Q+ ++ N T+SS++ C L L GK++H + K+GF
Sbjct: 236 AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295
Query: 736 KDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL 795
+ +VA+ +DMY+K G+L+ + +F + K L WN +I GFA + KE ++LF ++
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Query: 796 LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGY 855
+ G P+ +TF++LL+ C ++GLVEEG ++F M T Y + P + HYSCMVD+LG+AG
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 856 LDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNL 915
L EA++ I+++PF P A+IWG+LL SCR++ +LE AE+A+ +LF+LEP N+ N+ L+ N+
Sbjct: 416 LSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNI 475
Query: 916 LAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHL 975
A + +WE++ + R + + VK V SWI I VH FS + HP EI L +L
Sbjct: 476 YAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 535
Query: 976 VSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVC 1035
V + +K GY P D++ +K ++L+ H+EKLA+V+GLM +P+R++KN R+C
Sbjct: 536 VIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRIC 595
Query: 1036 SDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
DCH K S+ R I +RD RFHHF +G CSC D W
Sbjct: 596 VDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 198/422 (46%), Gaps = 54/422 (12%)
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
IL+LC + A H +I+ + DV L L+N Y KC VE A ++F + LE
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM--LE 124
Query: 360 DDLL-WNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQI 418
L+ WN +I + RN A+ +F EM+ K TI +L AC E K++
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 419 HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYV 478
H +K+ ++ NL V L+ +Y++ ++ A +VF+SM+D +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS----------------- 227
Query: 479 DVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVV 538
+TW+ +++G+ + +Y+ L L R Q + N ++S V
Sbjct: 228 ------------------SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 269
Query: 539 LQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNI 598
+ A + L L G++ H I ++G +++V +S +DMY K L+ + +F ++ +N+
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Query: 599 VAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
WN++ISG+ + +M+++ + P+ V+++SL+S G +E
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 659 MKNS-GIYPNVVTWTSLIS----GSLQNENYR--ESLKFFIQMQQEDIKPNSTTMSSLLQ 711
M+ + G+ PNVV ++ ++ L +E Y +S+ F P ++ SLL
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF---------DPTASIWGSLLA 440
Query: 712 TC 713
+C
Sbjct: 441 SC 442
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 204/440 (46%), Gaps = 78/440 (17%)
Query: 401 KMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
++LQ CA+ GA E K HG +++ LE ++++ N LI+ YS+ +ELA +VFD M +
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
+L SWN+MI YT N+M S L +
Sbjct: 126 SLVSWNTMIGLYTR-----------NRMES------------------------EALDIF 150
Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
M++ GF+ + ++S VL A ++ H ++ +D +LYVGT+L+D+Y K
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG-------LFVNAKKM---LNQMEEEEIK 630
+++A +VF++M++++ V W+S+++GY L+ A++M NQ +
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 631 PDLVSWNSLVSG-------------------------YSIWGQSKEALVIIHHMKNSGIY 665
+ +L+ G Y+ G +E+ +I ++
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK--- 327
Query: 666 PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
N+ W ++ISG ++ +E + F +MQQ+ + PN T SSLL CG GL++ G+
Sbjct: 328 -NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386
Query: 726 HCLCLKN-GFIKDAYVATGLIDMYSKSGNLKSAREVFRKSA-NKTLASWNCMIMGFAIYG 783
L G + + ++D+ ++G L A E+ + + T + W ++ +Y
Sbjct: 387 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYK 446
Query: 784 NGKEAILLFHELLETGFQPD 803
N + A + +L E +P+
Sbjct: 447 NLELAEVAAEKLFE--LEPE 464
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 166/357 (46%), Gaps = 9/357 (2%)
Query: 211 KSKHAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYES 270
K+ H ++I++ + ++ LI Y + G A + F RS W++ + Y
Sbjct: 81 KACHGKIIRI-DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVH 330
E E L+++ E+ +G F ++ +L C ++H +K D +++
Sbjct: 140 NRME-SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198
Query: 331 LKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFS 390
+ AL++ Y KC ++ A ++F + D + + W+ ++ ++N+ +E A+ L+R Q
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQD-KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 257
Query: 391 SAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELA 450
S + T+ ++ AC+ + A EGKQ+H + KS SN+ V + + MY++ L +
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 451 TRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
+F +++ NL WN++IS + LF KM + P+ +T++ LLS
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377
Query: 511 GSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYD 566
G + + M++ G PN S ++ + LL S Y L + +D
Sbjct: 378 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL-----SEAYELIKSIPFD 429
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 696 QEDIKP--------NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDM 747
QE++ P N + +LQ C G + K H ++ D + LI+
Sbjct: 46 QEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINA 105
Query: 748 YSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITF 807
YSK G ++ AR+VF ++L SWN MI + EA+ +F E+ GF+ T
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 808 TALLAACK-NSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTM 866
+++L+AC N +E K +S I + + ++DL K G + +A +M
Sbjct: 166 SSVLSACGVNCDALE--CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 223
Query: 867 PFKPDATIWGALLGSCRIHGHLEYAEIASRR 897
K T W +++ + + E A + RR
Sbjct: 224 QDKSSVT-WSSMVAGYVQNKNYEEALLLYRR 253
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/616 (33%), Positives = 341/616 (55%), Gaps = 39/616 (6%)
Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
P+I +N L++G + + L L ++ G +G + +VL+A T K G +
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
H +++ G ++D+ TSL+ +Y + L +A ++FD + +R++V W +L SGY G
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 615 VNAKKMLNQMEEEEIKPD----------------------LVSW-------------NSL 639
A + +M E +KPD +V + +L
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
V+ Y+ G+ ++A + +S + ++VTW+++I G N +E ++ F+QM QE++
Sbjct: 254 VNLYAKCGKMEKARSVF----DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 700 KPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSARE 759
KP+ ++ L +C LG L G+ L ++ F+ + ++A LIDMY+K G + E
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369
Query: 760 VFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGL 819
VF++ K + N I G A G+ K + +F + + G PD TF LL C ++GL
Sbjct: 370 VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429
Query: 820 VEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALL 879
+++G ++F+++S Y + T+EHY CMVDL G+AG LD+A+ I MP +P+A +WGALL
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489
Query: 880 GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKS 939
CR+ + AE + L LEP N+ NY + N+ ++ RW++ +R M++ G+K
Sbjct: 490 SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 549
Query: 940 VLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEE 999
+ +SWI+++ VH F A+ HP + +IY +L L +EM+ +G+VP T V+ D++EEE
Sbjct: 550 IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEE 609
Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
K +VL H+EKLA+ GL+ T IRV+KN RVC DCH K +S + REI +RD
Sbjct: 610 KERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNN 669
Query: 1060 RFHHFREGECSCNDCW 1075
RFH F G CSCND W
Sbjct: 670 RFHCFTNGSCSCNDYW 685
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 165/367 (44%), Gaps = 36/367 (9%)
Query: 276 QELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCAL 335
E L+++ + G+ ++LK CT+ + LG+++H+ ++K GF+ DV +L
Sbjct: 93 HETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSL 152
Query: 336 MNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAI 395
++ Y + A+KLF E+ D + W + + + AI LF++M K
Sbjct: 153 LSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 396 SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFD 455
S IV++L AC VG G+ I Y+ + ++ N V L+++Y++ K+E A VFD
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQN 515
SM + ++ +W++MI Y + LF +M ++PD +
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS---------------- 315
Query: 516 VLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMD 575
++ L SLG L G I R+ +L++ +L+D
Sbjct: 316 IVGFLSSCASLG-------------------ALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 576 MYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS 635
MY K + EVF MK ++IV N+ ISG G + + Q E+ I PD +
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416
Query: 636 WNSLVSG 642
+ L+ G
Sbjct: 417 FLGLLCG 423
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/523 (21%), Positives = 207/523 (39%), Gaps = 85/523 (16%)
Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
++H SLI D L L+ R + + LFS + + L+N +I + N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSH-TQFPNIFLYNSLINGFVNN 89
Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
+ + LF ++ T +L+AC + + G +H V+K +++
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
L+S+YS + +L A ++FD + D ++ +W ++ S YT G A LF K
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK------- 202
Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
M +G +P+ + VL A + L G
Sbjct: 203 ----------------------------MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
Y+ + + +V T+L+++Y K ++ A+ VFD+M ++IV W+++I GY
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 615 VNAKKMLNQMEEEEIKP------------------DLVSW-----------------NSL 639
++ QM +E +KP DL W N+L
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 640 VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDI 699
+ Y+ G + MK ++V + ISG +N + + S F Q ++ I
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 700 KPNSTTMSSLLQTCGGLGLLQNG----KEIHCLCLKNGFIKDAYVATG-LIDMYSKSGNL 754
P+ +T LL C GL+Q+G I C+ +K G ++D++ ++G L
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYA----LKRTVEHYGCMVDLWGRAGML 466
Query: 755 KSA-REVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELL 796
A R + W ++ G + + + A + EL+
Sbjct: 467 DDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis
thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/586 (36%), Positives = 335/586 (57%), Gaps = 13/586 (2%)
Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFR-PNGSSVSVVLQAVTELRLLKYGR 552
+PD +N L+ G+ N + + M GF P+ S + V++AV R L+ G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
+ H L++GL+ L+VGT+L+ MY C++ A++VFD M N+VAWN++I+ CF+G
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA-CFRG 185
Query: 613 LFV-NAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTW 671
V A+++ ++M + + SWN +++GY G+ + A I M + + V+W
Sbjct: 186 NDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMP----HRDDVSW 237
Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLK 731
+++I G N ++ ES +F ++Q+ + PN +++ +L C G + GK +H K
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 732 NGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANK-TLASWNCMIMGFAIYGNGKEAIL 790
G+ V LIDMYS+ GN+ AR VF K + SW MI G A++G G+EA+
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
LF+E+ G PD I+F +LL AC ++GL+EEG YF M Y+I P IEHY CMVDL
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 417
Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
G++G L +A+DFI MP P A +W LLG+C HG++E AE +RL +L+P NS +
Sbjct: 418 GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 477
Query: 911 LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYF 970
L+ N A + +W+DV +R SM +K WS +++ + ++ F+A E +
Sbjct: 478 LLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHE 537
Query: 971 ELYHLVSEMK-KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
+L ++ +K + GY P+ D++EEEK + H+EKLA+ + L + A IR++
Sbjct: 538 KLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIV 597
Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
KN R+C DCH K S V G EI +RD RFH F++G CSC D W
Sbjct: 598 KNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 202/464 (43%), Gaps = 51/464 (10%)
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVH------LKCALMNFYGKCRDVESANKLFS 353
+L C L A ++H IK G D D + L CA+ D +
Sbjct: 11 LLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAI-----SISDALPYARRLL 62
Query: 354 EVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ---FSSAKAISRTIVKMLQACAKVG 410
D ++N ++ +++ N++ +F EM F + S V ++A
Sbjct: 63 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFV--IKAVENFR 120
Query: 411 AFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMIS 470
+ G Q+H LK LES+L V LI MY +E A +VFD M NL +WN++I+
Sbjct: 121 SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT 180
Query: 471 SYTGLGYVDVAWSLFNKM----------------------NSSRI-----QPDIITWNCL 503
+ V A +F+KM ++ RI D ++W+ +
Sbjct: 181 ACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTM 240
Query: 504 LSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGL 563
+ G +GS+ R +Q G PN S++ VL A ++ ++G+ HG++ + G
Sbjct: 241 IVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY 300
Query: 564 DYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSLISGYCFKGLFVNAKKMLN 622
+ + V +L+DMY + + A+ VF+ M+ R IV+W S+I+G G A ++ N
Sbjct: 301 SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFN 360
Query: 623 QMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQN 681
+M + PD +S+ SL+ S G +E MK I P + + ++ ++
Sbjct: 361 EMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRS 420
Query: 682 ENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEI 725
+++ F QM I P + +LL C G ++ +++
Sbjct: 421 GKLQKAYDFICQMP---IPPTAIVWRTLLGACSSHGNIELAEQV 461
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 130/290 (44%), Gaps = 6/290 (2%)
Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
Y++ G+ SA + F R WS+ + + G E + EL G+
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGI-AHNGSFNESFLYFRELQRAGMSPNEVS 271
Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
LT +L C++ +F G +H + K G+ + V + AL++ Y +C +V A +F +
Sbjct: 272 LTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 331
Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
+ + W +I + + E A++LF EM + + +L AC+ G EG+
Sbjct: 332 EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
Query: 417 QIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS-SWNSMISSYTG 474
+ + +E + C++ +Y R+ KL+ A M + W +++ + +
Sbjct: 392 DYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSS 451
Query: 475 LGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGM 523
G +++A + ++N + P+ LLS + T G +++V ++ + M
Sbjct: 452 HGNIELAEQVKQRLN--ELDPNNSGDLVLLSNAYATAGKWKDVASIRKSM 499
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570 OS=Arabidopsis
thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 360/646 (55%), Gaps = 42/646 (6%)
Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
S + ++ + G +D A +F+ M+ + I+TWN L++ H + + + R M
Sbjct: 101 SGSKLVDASLKCGDIDYARQVFDGMS----ERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-DLYVGTSLMDMYVKNDC 582
+ P+ ++S V +A ++L L K + SHG + GL+ +++VG++L+DMYVK
Sbjct: 157 ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV-- 640
+ A+ V D ++ +++V +LI GY KG A K M E+++P+ ++ S++
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 641 -------------------SGYSIWGQSKEALVIIHHMKNSGI-----------YPNVVT 670
SG+ S+ +L+ ++ ++ S + YPN V+
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMY-LRCSLVDDSLRVFKCIEYPNQVS 335
Query: 671 WTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCL 730
WTSLISG +QN +L F +M ++ IKPNS T+SS L+ C L + + G++IH +
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 731 KNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAIL 790
K GF +D Y +GLID+Y K G AR VF + + S N MI +A G G+EA+
Sbjct: 396 KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 791 LFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLL 850
LF ++ G QP+ +T ++L AC NS LVEEG + FDS D I+ T +HY+CMVDLL
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLL 514
Query: 851 GKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYN 910
G+AG L+EA + + T PD +W LL +C++H +E AE +R++ ++EP +
Sbjct: 515 GRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLI 573
Query: 911 LMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSA-EGAPHPATGEIY 969
LM NL A + +W V ++ M ++ +K SW++I++ H F A + HP + +I
Sbjct: 574 LMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQIL 633
Query: 970 FELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVI 1029
L L+ + K LGYV D CV+QD++E K + L H+EKLAI + + + IR++
Sbjct: 634 ENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVG-GSIRIL 692
Query: 1030 KNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
KN RVC DCH+ K +S V REI RD RFHHFR+G CSC D W
Sbjct: 693 KNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 219/557 (39%), Gaps = 87/557 (15%)
Query: 178 PTDTLAKQAQLSCISSGFCFLNETNKF----------RCLSSVKSKHAQMIKMGKIWNSD 227
P ++ Q +L CI+ L T+ F R +S +K+ A M+K G + ++
Sbjct: 44 PESSINNQFRLLCITCDT--LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSG--FPAE 99
Query: 228 DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHG 287
L+ L+ GD A + F R W+S + Y +E +E++ +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIA-YLIKHRRSKEAVEMYRLMIT 158
Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDF-DVHLKCALMNFYGKCRDVE 346
V+ L+ + K + L H + G + +V + AL++ Y K
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 347 SANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQAC 406
A + V + + L+ I+ + E E A+K F+ M + T +L +C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTE-AVKAFQSMLVEKVQPNEYTYASVLISC 277
Query: 407 AKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWN 466
+ GK IHG ++KS ES L+ L++MY R + ++ + RVF ++ N SW
Sbjct: 278 GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWT 337
Query: 467 SMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL 526
S+IS G ++A F KM I+
Sbjct: 338 SLISGLVQNGREEMALIEFRKMMRDSIK-------------------------------- 365
Query: 527 GFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNA 586
PN ++S L+ + L + + GR+ HG + + G D D Y G+ L+D+Y K C A
Sbjct: 366 ---PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 587 QEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIW 646
+ VFD + ++++ N++I Y G
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGF--------------------------------- 449
Query: 647 GQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTM 706
+EAL + M N G+ PN VT S++ + E + F +++ I +
Sbjct: 450 --GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY 507
Query: 707 SSLLQTCGGLGLLQNGK 723
+ ++ G G L+ +
Sbjct: 508 ACMVDLLGRAGRLEEAE 524
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 5/301 (1%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
SL+ YL + + F + W+S + G E L+E + ++ +
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE-FRKMMRDSIK 365
Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
S L+ L+ C+ L F G ++H + K GFD D + L++ YGKC + A +
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
F +S++ D + N +I +N A+ LF M + T++ +L AC
Sbjct: 426 FDTLSEV-DVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 412 FHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISS 471
EG ++ K + C++ + R +LE A + + + +L W +++S+
Sbjct: 485 VEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Query: 472 YTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF-THGSYQNVLTLLRGMQSLGFRP 530
V++A + K+ I+P L+S + + G + V+ + M+ + +
Sbjct: 545 CKVHRKVEMAERITRKI--LEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 531 N 531
N
Sbjct: 603 N 603
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis
thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 239/715 (33%), Positives = 381/715 (53%), Gaps = 49/715 (6%)
Query: 402 MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHN 461
+L++ A+ F GK +H +KS + S+ + N +++YS+ +L A F S ++ N
Sbjct: 15 LLKSVAERDLF-TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 462 LSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLR 521
+ S+N ++ +Y + +A LF+++ QPD +++N L+SG+ + L +
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIP----QPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 522 GMQSLGFRPNGSSVSVVLQAVTE-LRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
M+ LGF +G ++S ++ A + + L+K + H + + G D V + + Y K
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLIK---QLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 581 DCLQNAQEVFDNMKN-RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD------- 632
L+ A VF M R+ V+WNS+I Y A + +M + K D
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 633 ---LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIY------------------------ 665
L S + L+ G G+ +A + SG+
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 666 PNVVTWTSLISG-SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKE 724
P++V W ++ISG S+ E E++K F QMQ+ +P+ + + C L K+
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 725 IHCLCLKNGFIKDAY-VATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYG 783
IH L +K+ + V LI +Y KSGNL+ AR VF + S+NCMI G+A +G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 784 NGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHY 843
+G EA+LL+ +L++G P+ ITF A+L+AC + G V+EG +YF++M + I P EHY
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 844 SCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEP 903
SCM+DLLG+AG L+EA FI MP+KP + W ALLG+CR H ++ AE A+ L ++P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546
Query: 904 CNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHP 963
+ Y ++ N+ A + +WE++ +R SM ++ SWI++ + HVF AE HP
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Query: 964 ATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLS---HTEKLAIVYGLMKT 1020
E+ L ++ +MKK+GYV D + DE +G + H+EKLA+ +GLM T
Sbjct: 607 MIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMST 666
Query: 1021 KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
+ + V+KN R+C DCH A K+MS V GREI +RD RFH F++G+CSC D W
Sbjct: 667 RDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 27/291 (9%)
Query: 240 FGDFTSAAKAFFLYFS------------------RSYADWSSFLEDYESFGGEVQELLEV 281
F ++S AF Y+S R W+S + Y E + L +
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK-EGAKALAL 227
Query: 282 WGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGK 341
+ E+ KG L +L T L G + H LIK GF + H+ L++FY K
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287
Query: 342 CRDVE---SANKLFSEVSDLEDDLL-WNEIIMVKLRNEKW-ENAIKLFREMQFSSAKAIS 396
C + + K+F E+ L DL+ WN +I NE+ E A+K FR+MQ +
Sbjct: 288 CGGCDGMYDSEKVFQEI--LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDD 345
Query: 397 RTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN-LSVCNCLISMYSRNNKLELATRVFD 455
+ V + AC+ + + + KQIHG +KS + SN +SV N LIS+Y ++ L+ A VFD
Sbjct: 346 CSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFD 405
Query: 456 SMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
M + N S+N MI Y G+ A L+ +M S I P+ IT+ +LS
Sbjct: 406 RMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 222/556 (39%), Gaps = 84/556 (15%)
Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
+ G +HA +K +L +N Y KC + A F + + +N I+
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEE-PNVFSYNVIVK 82
Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA---FHEGKQIHGYVLKSA 426
++ K A +LF E+ + + I A A F +++ V
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 427 LESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFN 486
L ++ C + + + + ++ FDS N N+ ++ Y+ G + A S+F
Sbjct: 143 LSGLIAACCDRVDLIKQLHCFSVSGG-FDSYSSVN----NAFVTYYSKGGLLREAVSVFY 197
Query: 487 KMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELR 546
M+ R D ++WN ++ + H L L + M GF+ + +++ VL A+T L
Sbjct: 198 GMDELR---DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 547 LLKYGRESHGYILRNGLDYDLYVGTSLMDMYVK---NDCLQNAQEVFDNMKNRNIVAWNS 603
L GR+ HG +++ G + +VG+ L+D Y K D + ++++VF + + ++V WN+
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNT 314
Query: 604 LISGYCF-KGLFVNAKKMLNQMEEEEIKPD---LVSWNSLVSGYSIWGQSKE--ALVIIH 657
+ISGY + L A K QM+ +PD V S S S Q K+ L I
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374
Query: 658 HMKNSGI-------------------------YP--NVVTWTSLISGSLQNENYRESLKF 690
H+ ++ I P N V++ +I G Q+ + E+L
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSK 750
+ +M I PN T ++L C G + G+E
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY------------------------- 469
Query: 751 SGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTAL 810
+ +E F+ ++CMI G +EA + ++P ++ + AL
Sbjct: 470 ---FNTMKETFK--IEPEAEHYSCMIDLLGRAGKLEEAERFIDAM---PYKPGSVAWAAL 521
Query: 811 LAAC---KNSGLVEEG 823
L AC KN L E
Sbjct: 522 LGACRKHKNMALAERA 537
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 7/249 (2%)
Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGD---FTSAAKAFFLYFSRSYADWSSFLEDYES 270
H ++IK G NS + LI Y + G + K F S W++ + Y
Sbjct: 263 HGKLIKAGFHQNSH-VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 271 FGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFD-V 329
+E ++ + ++ G + C+ L + ++H IK + +
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381
Query: 330 HLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF 389
+ AL++ Y K +++ A +F + +L + + +N +I ++ A+ L++ M
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPEL-NAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
Query: 390 SSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLE 448
S T V +L ACA G EG++ + ++ +E +C+I + R KLE
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 449 LATRVFDSM 457
A R D+M
Sbjct: 501 EAERFIDAM 509
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/590 (37%), Positives = 319/590 (54%), Gaps = 41/590 (6%)
Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
M LG +L A + R L+ G+ H ++++ Y+ T L+ Y K DC
Sbjct: 43 MAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 102
Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------- 632
L++A++V D M +N+V+W ++IS Y G A + +M + KP+
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 633 ----------------LVSWN---------SLVSGYSIWGQSKEALVIIHHMKNSGIYPN 667
+V WN SL+ Y+ GQ KEA I + +
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER----D 218
Query: 668 VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHC 727
VV+ T++I+G Q E+L+ F ++ E + PN T +SLL GL LL +GK+ HC
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 728 LCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKE 787
L+ A + LIDMYSK GNL AR +F +T SWN M++G++ +G G+E
Sbjct: 279 HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 788 AILLFHELL-ETGFQPDAITFTALLAACKNSGLVEEGWKYFDSM-STDYNIIPTIEHYSC 845
+ LF + E +PDA+T A+L+ C + + + G FD M + +Y P EHY C
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC 398
Query: 846 MVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCN 905
+VD+LG+AG +DEA++FI+ MP KP A + G+LLG+CR+H ++ E RRL ++EP N
Sbjct: 399 IVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPEN 458
Query: 906 SANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPAT 965
+ NY ++ NL A + RW DV +R M + V SWIQ +Q +H F A HP
Sbjct: 459 AGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRR 518
Query: 966 GEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAP 1025
E+ ++ + +MK+ GYVPD CV D+DEE+K K+LL H+EKLA+ +GL+ T P
Sbjct: 519 EEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIP 578
Query: 1026 IRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
IRV KN R+C DCH AK S V RE+ LRD RFH +G CSC D W
Sbjct: 579 IRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 196/417 (47%), Gaps = 42/417 (10%)
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
+L C A G VHA +IK + +L+ L+ FYGKC +E A K+ E+ + +
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE-K 116
Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
+ + W +I + A+ +F EM S K T +L +C + GKQIH
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
G ++K +S++ V + L+ MY++ +++ A +F+ + + ++ S ++I+ Y LG +
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVL 539
A +F++++S + P+ +T+ LL+
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLT---------------------------------- 262
Query: 540 QAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIV 599
A++ L LL +G+++H ++LR L + + SL+DMY K L A+ +FDNM R +
Sbjct: 263 -ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAI 321
Query: 600 AWNSLISGYCFKGLFVNAKKMLNQM-EEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHH 658
+WN+++ GY GL ++ M +E+ +KPD V+ +++SG S L I
Sbjct: 322 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDG 381
Query: 659 M--KNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
M G P + ++ + E+ +F +M KP + + SLL C
Sbjct: 382 MVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLGAC 435
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270, chloroplastic
OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1
Length = 752
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 239/737 (32%), Positives = 363/737 (49%), Gaps = 78/737 (10%)
Query: 373 RNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLS 432
++ K A + +EM + S + + +AC ++ + G+ +H + ++
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 433 VCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
+ NC++ MY LE A ++FD M + N S +MIS+Y G +D A LF+
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS------ 173
Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
GM + G +P S + +L+++ R L +GR
Sbjct: 174 -----------------------------GMLASGDKPPSSMYTTLLKSLVNPRALDFGR 204
Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
+ H +++R GL + + T +++MYVK L A+ VFD M + VA L+ GY G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 613 LFVNAKKMLNQMEEEEIKPD----------LVSWNSLVSGYSI------WGQSKEALV-- 654
+A K+ + E ++ D S L G I G E V
Sbjct: 265 RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGT 324
Query: 655 --IIHHMKNSGIY-----------PNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
+ ++K S PN V+W+++ISG Q + E++K F ++ ++
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASI 384
Query: 702 -NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
NS T +S+ Q C L G ++H +K I Y + LI MYSK G L A EV
Sbjct: 385 LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEV 444
Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
F N + +W I G A YGN EA+ LF +++ G +P+++TF A+L AC ++GLV
Sbjct: 445 FESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLV 504
Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
E+G D+M YN+ PTI+HY CM+D+ ++G LDEA F++ MPF+PDA W L
Sbjct: 505 EQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
Query: 881 SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
C H +LE EIA L +L+P ++A Y L NL + +WE+ + M+E +K
Sbjct: 565 GCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKE 624
Query: 941 LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEK 1000
L SWIQ +H F HP T EIY +L M+ + + E+
Sbjct: 625 LSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMF---------QCNMTER 675
Query: 1001 GKVLLSHTEKLAIVYGLMKT--KSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDG 1058
+ LL H+E+LAI +GL+ + API+V KN R C DCH AK++SLV G EI +RD
Sbjct: 676 REQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDS 735
Query: 1059 ARFHHFREGECSCNDCW 1075
RFHHF+EG+CSCND W
Sbjct: 736 RRFHHFKEGKCSCNDYW 752
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 230/522 (44%), Gaps = 47/522 (9%)
Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
C + R LS + H +M +MG I N ++++ + Y E A K F
Sbjct: 88 CLFEACRELRSLSHGRLLHDRM-RMG-IENPSVLLQNCVLQMYCECRSLEDADKLFDEMS 145
Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
+ ++ + Y G + + + ++ + G S + T +LK A G
Sbjct: 146 ELNAVSRTTMISAYAE-QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGR 204
Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
++HA +I+ G + ++ ++N Y KC + A ++F +++ ++ + +++ +
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA-VKKPVACTGLMVGYTQA 263
Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
+ +A+KLF ++ + S +L+ACA + + GKQIH V K LES +SV
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
L+ Y + + E A R F +++ N SW+++IS Y + + A F + S
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK--- 380
Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
N + FT+ S + QA + L G +
Sbjct: 381 ------NASILNSFTYTS-------------------------IFQACSVLADCNIGGQV 409
Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
H ++ L Y ++L+ MY K CL +A EVF++M N +IVAW + ISG+ + G
Sbjct: 410 HADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469
Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWG---QSKEALVIIHHMKNSGIYPNVVTW 671
A ++ +M +KP+ V++ ++++ S G Q K L + ++ + P + +
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM--LRKYNVAPTIDHY 527
Query: 672 TSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
+I ++ E+LKF M+ +P++ + L C
Sbjct: 528 DCMIDIYARSGLLDEALKF---MKNMPFEPDAMSWKCFLSGC 566
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130, chloroplastic
OS=Arabidopsis thaliana GN=PCMP-H27 PE=3 SV=1
Length = 804
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 245/783 (31%), Positives = 393/783 (50%), Gaps = 77/783 (9%)
Query: 328 DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM 387
D L AL F R +E A +LF E++ D LWN +I + A++ + M
Sbjct: 64 DPALTRALRGF-ADSRLMEDALQLFDEMNK-ADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121
Query: 388 QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
F+ KA + T ++++ A + + EGK+IH V+K S++ VCN LIS+Y +
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 448 ELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGH 507
A +VF+ M + DI++WN ++SG+
Sbjct: 182 WDAEKVFEEMPER-----------------------------------DIVSWNSMISGY 206
Query: 508 FTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY-D 566
G + L L + M GF+P+ S L A + + K G+E H + +R+ ++ D
Sbjct: 207 LALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGD 266
Query: 567 LYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
+ V TS++DMY K + A+ +F+ M RNIVAWN +I Y G +A +M E
Sbjct: 267 VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE 326
Query: 627 EE-IKPDLVS-------------------------------WNSLVSGYSIWGQSKEALV 654
+ ++PD+++ +L+ Y GQ K A V
Sbjct: 327 QNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEV 386
Query: 655 IIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
I M NV++W S+I+ +QN +L+ F ++ + P+STT++S+L
Sbjct: 387 IFDRMAEK----NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442
Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNC 774
L G+EIH +K+ + + + L+ MY+ G+L+ AR+ F K + SWN
Sbjct: 443 ESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNS 502
Query: 775 MIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDY 834
+IM +A++G G+ ++ LF E++ + P+ TF +LLAAC SG+V+EGW+YF+SM +Y
Sbjct: 503 IIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562
Query: 835 NIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIA 894
I P IEHY CM+DL+G+ G A F+ MPF P A IWG+LL + R H + AE A
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622
Query: 895 SRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHV 954
+ ++FK+E N+ Y L++N+ A + RWEDV R++ M+ G+ S ++ HV
Sbjct: 623 AEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHV 682
Query: 955 FSAEGAPHPATGEIYFELYHLVSEM--KKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLA 1012
F+ H AT +IY E+ +VS M ++ YV + + + + H+ +LA
Sbjct: 683 FTNGDRSHVATNKIY-EVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLA 741
Query: 1013 IVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCN 1072
+GL+ T++ + V NTR+C CH + S + REI + D FHHF G CSC
Sbjct: 742 TCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCG 801
Query: 1073 DCW 1075
+ W
Sbjct: 802 NYW 804
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 139/561 (24%), Positives = 250/561 (44%), Gaps = 86/561 (15%)
Query: 240 FGDFTSAAKAFFLYFSRSYAD---WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
F D A L+ + AD W+ ++ + S G + E ++ + + GV +
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI-EAVQFYSRMVFAGVKADTFT 132
Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
++K + + G ++HA +IK GF DV++ +L++ Y K A K+F E+
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
+ D + WN +I L +++ LF+EM K + + L AC+ V + GK
Sbjct: 193 E-RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 417 QIHGYVLKSALES-NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
+IH + ++S +E+ ++ V ++ MYS+ ++ A R+F+ M N+ +WN MI Y
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 476 GYVDVAWSLFNKMNSSR-IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSS 534
G V A+ F KM+ +QPD+IT S+ P
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVIT-------------------------SINLLP---- 342
Query: 535 VSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK 594
S +L+ GR HGY +R G + + T+L+DMY + L++A+ +FD M
Sbjct: 343 ASAILE----------GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 595 NRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS------------------- 635
+N+++WNS+I+ Y G +A ++ ++ + + PD +
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 636 ----------W------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSL 679
W NSLV Y++ G ++A +H+ + +VV+W S+I
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI----LLKDVVSWNSIIMAYA 508
Query: 680 QNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAY 739
+ R S+ F +M + PN +T +SLL C G++ G E + I
Sbjct: 509 VHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 568
Query: 740 VATG-LIDMYSKSGNLKSARE 759
G ++D+ ++GN +A+
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKR 589
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 230/512 (44%), Gaps = 54/512 (10%)
Query: 207 LSSVKSKHAQMIKMGKIWNSDDMV-KSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFL 265
L K HA +IK+G + SD V SLI Y++ G A K F R W+S +
Sbjct: 146 LEEGKKIHAMVIKLGFV--SDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203
Query: 266 EDYESFGGEVQELLEVWGELHGKGVIFRSRILTII--LKLCTKLMAFWLGVEVHASLIKR 323
Y + G L+ ++ E+ G F+ + + L C+ + + +G E+H ++
Sbjct: 204 SGYLALGDGFSSLM-LFKEMLKCG--FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 324 GFDF-DVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIK 382
+ DV + ++++ Y K +V A ++F+ + + + WN +I RN + +A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ-RNIVAWNVMIGCYARNGRVTDAFL 319
Query: 383 LFREM-QFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMY 441
F++M + + + T + +L A A + EG+ IHGY ++ ++ + LI MY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 442 SRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWN 501
+L+ A +FD M + N+ SWNS+I++Y G A LF ++ S + PD
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPD----- 430
Query: 502 CLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRN 561
++++ +L A E L GRE H YI+++
Sbjct: 431 ------------------------------STTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 562 GLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKML 621
+ + SL+ MY L++A++ F+++ +++V+WNS+I Y G + +
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 622 NQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQ 680
++M + P+ ++ SL++ SI G E MK GI P + + ++ +
Sbjct: 521 SEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGR 580
Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQT 712
N+ + +F +M P + SLL
Sbjct: 581 TGNFSAAKRFLEEMP---FVPTARIWGSLLNA 609
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 167/317 (52%), Gaps = 17/317 (5%)
Query: 202 NKFRCLSSVKS-KHAQMIKMGK----------IWNSDDMV-KSLIFHYLEFGDFTSAAKA 249
++F +S++ + H KMGK I D MV S++ Y ++G+ + A +
Sbjct: 230 DRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 250 FFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMA 309
F R+ W+ + Y + G V + + ++ + + I +I L + ++
Sbjct: 290 FNGMIQRNIVAWNVMIGCY-ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 310 FWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIM 369
G +H ++RGF + L+ AL++ YG+C ++SA +F +++ ++ + WN II
Sbjct: 349 ---GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE-KNVISWNSIIA 404
Query: 370 VKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALES 429
++N K +A++LF+E+ SS S TI +L A A+ + EG++IH Y++KS S
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 430 NLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN 489
N + N L+ MY+ LE A + F+ + ++ SWNS+I +Y G+ ++ LF++M
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 490 SSRIQPDIITWNCLLSG 506
+SR+ P+ T+ LL+
Sbjct: 525 ASRVNPNKSTFASLLAA 541
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1
Length = 659
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/635 (33%), Positives = 346/635 (54%), Gaps = 47/635 (7%)
Query: 483 SLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV 542
+LFN+ + D+ +WN +++ G L M+ L P SS ++A
Sbjct: 30 TLFNRYVD---KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 543 TELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWN 602
+ L + G+++H G D++V ++L+ MY L++A++VFD + RNIV+W
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 603 SLISGYCFKGLFVNAKKMLNQMEEEEIKPD---------LVS------------------ 635
S+I GY G ++A + + +E D LVS
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 636 --------------WNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQN 681
N+L+ Y+ G+ + + + + + + V++ S++S Q+
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEG--GVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 682 ENYRESLKFFIQMQQEDIKP-NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
E+ + F ++ + + N+ T+S++L G L+ GK IH ++ G D V
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324
Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
T +IDMY K G +++AR+ F + NK + SW MI G+ ++G+ +A+ LF ++++G
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
+P+ ITF ++LAAC ++GL EGW++F++M + + P +EHY CMVDLLG+AG+L +A+
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 861 DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
D I+ M KPD+ IW +LL +CRIH ++E AEI+ RLF+L+ N Y L+ ++ A +
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 921 RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
RW+DVER+R M G+ +S ++++ VHVF HP +IY L L ++
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 981 KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
+ GYV +T V D+DEEEK L H+EKLAI +G+M T + + V+KN RVCSDCH
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHN 624
Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
K +S + RE +RD RFHHF++G CSC D W
Sbjct: 625 VIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 220/467 (47%), Gaps = 58/467 (12%)
Query: 261 WSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASL 320
W+S + D G + LL + + + +K C+ L + G + H
Sbjct: 44 WNSVIADLARSGDSAEALL-AFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102
Query: 321 IKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENA 380
G+ D+ + AL+ Y C +E A K+F E+ + + W +I N +A
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMIRGYDLNGNALDA 161
Query: 381 IKLFREM---QFSSAKAI---SRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
+ LF+++ + A+ S +V ++ AC++V A + IH +V+K + +SV
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 435 NCLISMYSRNNK--LELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSR 492
N L+ Y++ + + +A ++FD + D + S+NS++S Y G + A+ +F ++
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL---- 277
Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
++ ++T+N + ++S VL AV+ L+ G+
Sbjct: 278 VKNKVVTFNAI------------------------------TLSTVLLAVSHSGALRIGK 307
Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
H ++R GL+ D+ VGTS++DMY K ++ A++ FD MKN+N+ +W ++I+GY G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTW 671
A ++ M + ++P+ +++ S+++ S G E + MK G+ P + +
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 672 TSLI-----SGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
++ +G LQ K + +Q+ +KP+S SSLL C
Sbjct: 428 GCMVDLLGRAGFLQ--------KAYDLIQRMKMKPDSIIWSSLLAAC 466
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 162/344 (47%), Gaps = 18/344 (5%)
Query: 175 ALPPTDTLAKQAQLSCISSGFCFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKS-L 233
AL ++ K + SS C + + + S K H Q G + SD V S L
Sbjct: 60 ALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG--YQSDIFVSSAL 117
Query: 234 IFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL------HG 287
I Y G A K F R+ W+S + Y+ G + + ++ +L
Sbjct: 118 IVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD-LNGNALDAVSLFKDLLVDENDDD 176
Query: 288 KGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD--V 345
+ S L ++ C+++ A L +H+ +IKRGFD V + L++ Y K + V
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 346 ESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREM---QFSSAKAISRTIVKM 402
A K+F ++ D +D + +N I+ V ++ A ++FR + + + AI T+ +
Sbjct: 237 AVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI--TLSTV 293
Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
L A + GA GK IH V++ LE ++ V +I MY + ++E A + FD MK+ N+
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353
Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSG 506
SW +MI+ Y G+ A LF M S ++P+ IT+ +L+
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 206/526 (39%), Gaps = 108/526 (20%)
Query: 331 LKCALMNFYGKCRDVESAN--KLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ 388
L C++ R E N LF+ D D WN +I R+ A+ F M+
Sbjct: 9 LFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMR 68
Query: 389 FSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLE 448
S + ++AC+ + GKQ H +S++ V + LI MYS KLE
Sbjct: 69 KLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128
Query: 449 LATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHF 508
A +VFD + N+ SW SMI Y G A SLF + D +
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF-------- 180
Query: 509 THGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLY 568
+ S+G VSV+ A + + H ++++ G D +
Sbjct: 181 --------------LDSMGL------VSVI-SACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 569 VGTSLMDMYVKN--DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEE 626
VG +L+D Y K + A+++FD + +++ V++NS++S Y G+ A ++ ++ +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 627 EEI------------------------------------KPDLVSWNSLVSGYSIWGQSK 650
++ + D++ S++ Y G+ +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLL 710
A MKN NV +WT++I+G + + ++L+ F M ++PN T S+L
Sbjct: 340 TARKAFDRMKN----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 711 QTCGGLGLLQNG-KEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
C GL G + + + + G ++D+ ++G L+ A ++ ++ K
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK-- 453
Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACK 815
PD+I +++LLAAC+
Sbjct: 454 --------------------------------PDSIIWSSLLAACR 467
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 109/271 (40%), Gaps = 36/271 (13%)
Query: 241 GDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGEL-HGKGVIFRSRILTI 299
G A K F + ++S + Y G E EV+ L K V F + L+
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLE 359
+L + A +G +H +I+ G + DV + ++++ Y KC VE+A K F + + +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN-K 351
Query: 360 DDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIH 419
+ W +I + A++LF M S + T V +L AC+ H G +
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-----HAGLHVE 406
Query: 420 GYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVD 479
G+ +A++ V + L + M+ G++
Sbjct: 407 GWRWFNAMKGRFGV-------------------------EPGLEHYGCMVDLLGRAGFLQ 441
Query: 480 VAWSLFNKMNSSRIQPDIITWNCLLSGHFTH 510
A+ L +M +++PD I W+ LL+ H
Sbjct: 442 KAYDLIQRM---KMKPDSIIWSSLLAACRIH 469
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis
thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 334/612 (54%), Gaps = 16/612 (2%)
Query: 468 MISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG 527
++S + L D + S+F NS P ++ N L+ G + +++ + M LG
Sbjct: 66 LVSCSSLLKSPDYSLSIFR--NSEERNPFVL--NALIRGLTENARFESSVRHFILMLRLG 121
Query: 528 FRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQ 587
+P+ + VL++ ++L GR H L+N +D D +V SL+DMY K L++A
Sbjct: 122 VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAF 181
Query: 588 EVF----DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
+VF D +K +I+ WN LI+GYC A + M E + SW++L+ GY
Sbjct: 182 QVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGY 237
Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
G+ A + M NVV+WT+LI+G Q +Y ++ + +M ++ +KPN
Sbjct: 238 VDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNE 293
Query: 704 TTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRK 763
T++++L C G L +G IH L NG D + T L+DMY+K G L A VF
Sbjct: 294 YTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN 353
Query: 764 SANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG 823
+K + SW MI G+A++G +AI F +++ +G +PD + F A+L AC NS V+ G
Sbjct: 354 MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Query: 824 WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCR 883
+FDSM DY I PT++HY +VDLLG+AG L+EA + + MP PD T W AL +C+
Sbjct: 414 LNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACK 473
Query: 884 IHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVW 943
H AE S+ L +L+P +Y + A +DVE+ R S+ + + L W
Sbjct: 474 AHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGW 533
Query: 944 SWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKV 1003
S+I++D ++ FSA H T EI +L ++S + GY P DI+EEEK V
Sbjct: 534 SYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENV 593
Query: 1004 LLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHH 1063
H+EKLA+ G ++T IR+IKN R+C DCH+ KY+S + R+I LRD +FHH
Sbjct: 594 TGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHH 653
Query: 1064 FREGECSCNDCW 1075
F++G CSC D W
Sbjct: 654 FKDGRCSCGDYW 665
Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 191/440 (43%), Gaps = 74/440 (16%)
Query: 316 VHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNE 375
VHA +++RG + L++ + + + +F S+ + + N +I N
Sbjct: 48 VHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSIFRN-SEERNPFVLNALIRGLTENA 105
Query: 376 KWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESN----- 430
++E++++ F M K T +L++ +K+G G+ +H LK+ ++ +
Sbjct: 106 RFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRL 165
Query: 431 ------------------------------LSVCNCLISMYSRNNKLELATRVFDSMKDH 460
+ + N LI+ Y R + +AT +F SM +
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
N SW+++I Y G ++ A LF M + ++++W L++G G Y+ ++
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTLINGFSQTGDYETAISTY 281
Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
M G +PN +++ VL A ++ L G HGYIL NG+ D +GT+L+DMY K
Sbjct: 282 FEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVS----- 635
L A VF NM +++I++W ++I G+ G F A + QM KPD V
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 636 ---------------WNSLVSGYSIWGQSKEALVIIHHMKNSG-------------IYPN 667
++S+ Y+I K ++++ + +G I P+
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 668 VVTWTSLISGSLQNENYRES 687
+ TW +L ++ YR +
Sbjct: 462 LTTWAALYRACKAHKGYRRA 481
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 4/239 (1%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
+LI Y++ G+ A + F L ++ W++ + + S G+ + + + E+ KG+
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGF-SQTGDYETAISTYFEMLEKGLK 290
Query: 292 FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKL 351
+ +L C+K A G+ +H ++ G D + AL++ Y KC +++ A +
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 352 FSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGA 411
FS ++ +D L W +I + ++ AI+ FR+M +S K + +L AC
Sbjct: 351 FSNMNH-KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409
Query: 412 FHEGKQIHGYV-LKSALESNLSVCNCLISMYSRNNKLELATRVFDSMK-DHNLSSWNSM 468
G + L A+E L ++ + R KL A + ++M + +L++W ++
Sbjct: 410 VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 48/345 (13%)
Query: 300 ILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDL- 358
+LK +KL WLG +HA+ +K D D ++ +L++ Y K ++ A ++F E D
Sbjct: 132 VLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRI 191
Query: 359 --EDDLLWNEIIMVKLRNEKWENAIKLFREM-------------------QFSSAKAI-- 395
E L+WN +I R + A LFR M + + AK +
Sbjct: 192 KKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFE 251
Query: 396 ---SRTIVK---MLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLEL 449
+ +V ++ ++ G + + +L+ L+ N ++S S++ L
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 450 ATRVFDSMKDHNL----SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
R+ + D+ + + +++ Y G +D A ++F+ MN DI++W ++
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN----HKDILSWTAMIQ 367
Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAV-----TELRLLKYGRESHGYILR 560
G HG + + R M G +P+ VL A +L L + Y +
Sbjct: 368 GWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIE 427
Query: 561 NGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMK-NRNIVAWNSL 604
L + + V +D+ + L A E+ +NM N ++ W +L
Sbjct: 428 PTLKHYVLV----VDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 107/276 (38%), Gaps = 22/276 (7%)
Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
P+ + SL+ C L + +H L+ G + + VA L+ S + + +
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSI 82
Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
FR S + N +I G + ++ F +L G +PD +TF +L + G
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMP---FKPDATIWGA 877
G + ++ + S +VD+ K G L A+ P K IW
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLS-LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 878 LL-GSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVG 936
L+ G CR +A+ + NS +++ ++ S ++L M E
Sbjct: 202 LINGYCRAKD----MHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE-- 255
Query: 937 VKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
K+V+ W+ +++ FS G A YFE+
Sbjct: 256 -KNVVSWT-----TLINGFSQTGDYETAIS-TYFEM 284
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510, chloroplastic
OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1
Length = 866
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/837 (29%), Positives = 415/837 (49%), Gaps = 79/837 (9%)
Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
G+++E +++ + V + +++LC A G +V++ + V L
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQF-SS 391
A + + + ++ A +F ++S+ + WN ++ + ++ A+ L+ M +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 392 AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELAT 451
K T +L+ C + GK++H +V++ E ++ V N LI+MY +
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK-------- 243
Query: 452 RVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHG 511
G V A LF++M + DII+WN ++SG+F +G
Sbjct: 244 -----------------------CGDVKSARLLFDRMP----RRDIISWNAMISGYFENG 276
Query: 512 SYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGT 571
L L M+ L P+ +++ V+ A L + GR+ H Y++ G D+ V
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 572 SLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKP 631
SL MY+ + A+++F M+ ++IV+W ++ISGY + L A M+++ +KP
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396
Query: 632 D-------------------------------LVSW----NSLVSGYSIWGQSKEALVII 656
D L+S+ N+L++ YS +AL I
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 657 HHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGL 716
H++ NV++WTS+I+G N E+L F QM+ ++PN+ T+++ L C +
Sbjct: 457 HNIPRK----NVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARI 511
Query: 717 GLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMI 776
G L GKEIH L+ G D ++ L+DMY + G + +A F S K + SWN ++
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILL 570
Query: 777 MGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNI 836
G++ G G + LF ++++ +PD ITF +LL C S +V +G YF M DY +
Sbjct: 571 TGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGV 629
Query: 837 IPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASR 896
P ++HY+C+VDLLG+AG L EA FI+ MP PD +WGALL +CRIH ++ E++++
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQ 689
Query: 897 RLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFS 956
+F+L+ + Y L+ NL A +W +V ++R M E G+ SW+++ VH F
Sbjct: 690 HIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFL 749
Query: 957 AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYG 1016
++ HP T EI L +M ++G + D E + ++ H+E+ AI +G
Sbjct: 750 SDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFG 809
Query: 1017 LMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCND 1073
L+ T PI V KN +C +CH K++S REI +RD FHHF++GECSC D
Sbjct: 810 LINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/578 (24%), Positives = 241/578 (41%), Gaps = 110/578 (19%)
Query: 374 NEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
N K E A+KL MQ V +++ C A EG +++ L S + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMN-SSR 492
N ++M+ R L A VF M + NL SWN ++ Y GY D A L+++M
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGR 552
++PD+ T+ C+L ++ G P+ L G+
Sbjct: 192 VKPDVYTFPCVL-------------------RTCGGIPD----------------LARGK 216
Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKG 612
E H +++R G + D+ V +L+ MYVK +++A+ +FD M R+I++WN++ISGY G
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 613 LFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSG--------- 663
+ ++ M + PDL++ S++S + G + I ++ +G
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 664 ----IYPN------------------VVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
+Y N +V+WT++ISG N +++ + M Q+ +KP
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396
Query: 702 NSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVF 761
+ T++++L C LG L G E+H L +K I VA LI+MYSK + A ++F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 762 RKSANKTLASWNCMIMGFAIYGNGKEAILLFHEL-------------------------- 795
K + SW +I G + EA++ ++
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMC 516
Query: 796 --------LETGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTD---YNIIPTIEHYS 844
L TG D ALL G + W F+S D +NI+ T YS
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTSWNILLT--GYS 574
Query: 845 CMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSC 882
G+ + E +D + +PD + +LL C
Sbjct: 575 ----ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 240/519 (46%), Gaps = 45/519 (8%)
Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYF 254
C L L+ K H +++ G + D D+V +LI Y++ GD SA F
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYG--YELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
R W++ + Y G E LE++ + G V LT ++ C L LG
Sbjct: 259 RRDIISWNAMISGYFE-NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
++HA +I GF D+ + +L Y A KLFS + + +D + W +I N
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDIVSWTTMISGYEYN 376
Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
+ AI +R M S K T+ +L ACA +G G ++H +K+ L S + V
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
N LI+MYS+ ++ A +F ++ N+ SW S+I+ GL ++N+
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA---GL-----------RLNN---- 478
Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRES 554
C L LR M+ + +PN +++ L A + L G+E
Sbjct: 479 ------RCF-----------EALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEI 520
Query: 555 HGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLF 614
H ++LR G+ D ++ +L+DMYV+ + A F++ K +++ +WN L++GY +G
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQG 579
Query: 615 VNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSL 674
++ ++M + ++PD +++ SL+ G S ++ L+ M++ G+ PN+ + +
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACV 639
Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTC 713
+ + +E+ KF +Q+ + P+ +LL C
Sbjct: 640 VDLLGRAGELQEAHKF---IQKMPVTPDPAVWGALLNAC 675
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 130/561 (23%), Positives = 225/561 (40%), Gaps = 75/561 (13%)
Query: 237 YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRI 296
++ FG+ A F R+ W+ + Y G + + L GV
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
+L+ C + G EVH +++ G++ D+ + AL+ Y KC DV+SA LF +
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
D + WN +I N ++LF M+ S T+ ++ AC +G G+
Sbjct: 259 R-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
IH YV+ + ++SVCN L MY A ++F M+ ++ SW +MIS Y
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSVS 536
D A + M+ ++PD IT V+
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEIT-----------------------------------VA 402
Query: 537 VVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNR 596
VL A L L G E H ++ L + V +L++MY K C+ A ++F N+ +
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 597 NIVAWNSLISGY-----CFKGL-FVNAKKMLNQ-------------------MEEEEIKP 631
N+++W S+I+G CF+ L F+ KM Q M +EI
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHA 522
Query: 632 DLVSW---------NSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNE 682
++ N+L+ Y G+ A + K +V +W L++G +
Sbjct: 523 HVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK-----DVTSWNILLTGYSERG 577
Query: 683 NYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVAT 742
++ F +M + ++P+ T SLL C +++ G G +
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYA 637
Query: 743 GLIDMYSKSGNLKSAREVFRK 763
++D+ ++G L+ A + +K
Sbjct: 638 CVVDLLGRAGELQEAHKFIQK 658
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 3/206 (1%)
Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
+ G N E++K MQ+ + + +L++ C + G +++ + L +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
+ + M+ + GNL A VF K + + L SWN ++ G+A G EA+ L+H
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 795 LLET-GFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKA 853
+L G +PD TF +L C + G K Y I+ + ++ + K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARG-KEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 854 GYLDEAWDFIRTMPFKPDATIWGALL 879
G + A MP + D W A++
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMI 269
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1
Length = 633
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/575 (34%), Positives = 319/575 (55%), Gaps = 40/575 (6%)
Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
+ +L+ T +LL GR H +IL++ +D+ +G +L++MY K L+ A++VF+ M
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 596 RNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG------------- 642
R+ V W +LISGY +A NQM P+ + +S++
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 643 ----------------------YSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQ 680
Y+ +G +A ++ +++ N V+W +LI+G +
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHAR 239
Query: 681 NENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYV 740
++L+ F M ++ +P+ + +SL C G L+ GK +H +K+G A+
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 741 ATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGF 800
L+DMY+KSG++ AR++F + A + + SWN ++ +A +G GKEA+ F E+ G
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 801 QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAW 860
+P+ I+F ++L AC +SGL++EGW Y++ M D I+P HY +VDLLG+AG L+ A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 861 DFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSN 920
FI MP +P A IW ALL +CR+H + E A+ +F+L+P + + ++ N+ A
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478
Query: 921 RWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMK 980
RW D R+R M E GVK SW++I+ +H+F A HP EI + +++++K
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Query: 981 KLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHT 1040
+LGYVPDT V +D++E+ L H+EK+A+ + L+ T + I + KN RVC DCHT
Sbjct: 539 ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHT 598
Query: 1041 AAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
A K S V GREI +RD RFHHF++G CSC D W
Sbjct: 599 AIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 197/430 (45%), Gaps = 39/430 (9%)
Query: 284 ELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCR 343
+L G + R +LK CT G VHA +++ F D+ + L+N Y KC
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 344 DVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKML 403
+E A K+F ++ D + W +I ++++ +A+ F +M T+ ++
Sbjct: 110 SLEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 404 QACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLS 463
+A A G Q+HG+ +K +SN+ V + L+ +Y+R
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR-------------------- 208
Query: 464 SWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM 523
G +D A +F+ + S + ++WN L++GH + L L +GM
Sbjct: 209 -----------YGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGM 253
Query: 524 QSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCL 583
GFRP+ S + + A + L+ G+ H Y++++G + G +L+DMY K+ +
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313
Query: 584 QNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGY 643
+A+++FD + R++V+WNSL++ Y G A +M I+P+ +S+ S+++
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Query: 644 SIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNS 703
S G E MK GI P + +++ + + +L+F +M I+P +
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTA 430
Query: 704 TTMSSLLQTC 713
+LL C
Sbjct: 431 AIWKALLNAC 440
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 196/431 (45%), Gaps = 67/431 (15%)
Query: 386 EMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNN 445
+++ S A R +L+ C +G+ +H ++L+S ++ + N L++MY++
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK-- 107
Query: 446 KLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLS 505
G ++ A +F KM Q D +TW L+S
Sbjct: 108 -----------------------------CGSLEEARKVFEKMP----QRDFVTWTTLIS 134
Query: 506 GHFTHGSYQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDY 565
G+ H + L M G+ PN ++S V++A R G + HG+ ++ G D
Sbjct: 135 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194
Query: 566 DLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQME 625
+++VG++L+D+Y + + +AQ VFD +++RN V+WN+LI+G+ + A ++ M
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 626 EEEIKPDLVSWNSLVSGYSIWG-------------QSKEALVIIH-------HMKNSGIY 665
+ +P S+ SL S G +S E LV + K+ I+
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 666 P-----------NVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCG 714
+VV+W SL++ Q+ +E++ +F +M++ I+PN + S+L C
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Query: 715 GLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSA-REVFRKSANKTLASWN 773
GLL G + L K+G + +A+ ++D+ ++G+L A R + T A W
Sbjct: 375 HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 434
Query: 774 CMIMGFAIYGN 784
++ ++ N
Sbjct: 435 ALLNACRMHKN 445
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 145/287 (50%), Gaps = 8/287 (2%)
Query: 601 WNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHMK 660
+N+L+ L + + + + + + D+V N+L++ Y+ G +EA + M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 661 NSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
+ VTWT+LISG Q++ ++L FF QM + PN T+SS+++
Sbjct: 123 QR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 721 NGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFA 780
G ++H C+K GF + +V + L+D+Y++ G + A+ VF ++ SWN +I G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 781 IYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEG-WKYFDSMSTDYNIIPT 839
++A+ LF +L GF+P ++ +L AC ++G +E+G W + + + ++
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 840 IEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHG 886
+ ++D+ K+G + +A + K D W +LL + HG
Sbjct: 299 AG--NTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHG 342
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/514 (21%), Positives = 213/514 (41%), Gaps = 56/514 (10%)
Query: 164 PNSITNSPTSLALPPTDTLAKQA----QLSCISSGFCFLNETNK----FRCLSSVKSKHA 215
P S + SL P D L + + + S I + F N K F+ L + HA
Sbjct: 25 PVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHA 84
Query: 216 QMIKMGKIWNSD-DMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGE 274
+++ I+ D M +L+ Y + G A K F R + W++ + Y
Sbjct: 85 HILQ--SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP 142
Query: 275 VQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCA 334
LL + ++ G L+ ++K G ++H +K GFD +VH+ A
Sbjct: 143 CDALL-FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 335 LMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKA 394
L++ Y + ++ A +F + +D+ WN +I R E A++LF+ M +
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALES-RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP 260
Query: 395 ISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVF 454
+ + AC+ G +GK +H Y++KS + N L+ MY+++ + A ++F
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 455 DSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQ 514
D + ++ SWNS++++Y G+ A F +M
Sbjct: 321 DRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM-------------------------- 354
Query: 515 NVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLM 574
+ +G RPN S VL A + LL G + + ++G+ + + +++
Sbjct: 355 ---------RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVV 405
Query: 575 DMYVKNDCLQNAQEVFDNMKNRNIVA-WNSLISG---YCFKGLFVNAKKMLNQMEEEEIK 630
D+ + L A + M A W +L++ + L A + + +++ ++
Sbjct: 406 DLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPG 465
Query: 631 PDLVSWNSLVSGYSIWGQSKEALVIIHHMKNSGI 664
P ++ +N SG G+ +A + MK SG+
Sbjct: 466 PHVILYNIYASG----GRWNDAARVRKKMKESGV 495
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis
thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/791 (28%), Positives = 388/791 (49%), Gaps = 66/791 (8%)
Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
+ HA +I GF D+ L L + A +F V D L+N ++ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR-PDVFLFNVLMRGFSVN 96
Query: 375 EKWENAIKLFREMQFSS-AKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSV 433
E +++ +F ++ S+ K S T + A + G+ IHG + +S L +
Sbjct: 97 ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 434 CNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRI 493
+ ++ MY + ++E A +VFD M
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMP----------------------------------- 181
Query: 494 QPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRLLKYGR 552
+ D I WN ++SG+ + Y + + R + + R + +++ +L AV EL+ L+ G
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGM 241
Query: 553 ESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYC--- 609
+ H + G YV T + +Y K ++ +F + +IVA+N++I GY
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
Query: 610 --------FKGLFVNAKKM-----------------LNQMEEEEIKPDLVSWNSLVSGYS 644
FK L ++ ++ + + +K + +S S+ + +
Sbjct: 302 ETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALT 361
Query: 645 IWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKPNST 704
+ + + ++ +W ++ISG QN +++ F +MQ+ + PN
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421
Query: 705 TMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKS 764
T++ +L C LG L GK +H L F YV+T LI MY+K G++ AR +F
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 765 ANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLVEEGW 824
K +WN MI G+ ++G G+EA+ +F+E+L +G P +TF +L AC ++GLV+EG
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 825 KYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRI 884
+ F+SM Y P+++HY+CMVD+LG+AG+L A FI M +P +++W LLG+CRI
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 885 HGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWS 944
H A S +LF+L+P N + L+ N+ + + +R + + + ++
Sbjct: 602 HKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYT 661
Query: 945 WIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVL 1004
I+I + HVF++ HP EIY +L L +M++ GY P+T D++EEE+ ++
Sbjct: 662 LIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMV 721
Query: 1005 LSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHF 1064
H+E+LAI +GL+ T+ IR+IKN RVC DCHT K +S + R I +RD RFHHF
Sbjct: 722 KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHF 781
Query: 1065 REGECSCNDCW 1075
++G CSC D W
Sbjct: 782 KDGVCSCGDYW 792
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 232/501 (46%), Gaps = 67/501 (13%)
Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
S+L+ + I ++ N + L T++ + D LG + A +F +
Sbjct: 34 SHLAQTHAQIILHGFRNDISLLTKLTQRLSD---------------LGAIYYARDIFLSV 78
Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGM-QSLGFRPNGSSVSVVLQAVTELRL 547
+PD+ +N L+ G + S + L++ + +S +PN S+ + + A + R
Sbjct: 79 Q----RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRD 134
Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
+ GR HG + +G D +L +G++++ MY K +++A++VFD M ++ + WN++ISG
Sbjct: 135 DRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG 194
Query: 608 YCFKGLFVNAKKMLNQMEEE-----------EIKPDLVSWNSL----------------- 639
Y ++V + ++ + E +I P + L
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 640 --------VSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFF 691
+S YS G+ K + + P++V + ++I G N SL F
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFRK----PDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 692 IQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKS 751
++ + S+T+ SL+ G L L+ IH CLK+ F+ A V+T L +YSK
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 752 GNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALL 811
++SAR++F +S K+L SWN MI G+ G ++AI LF E+ ++ F P+ +T T +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 812 AACKNSGLVEEG-WKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKP 870
+AC G + G W + STD+ +I + ++ + K G + EA M K
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFE--SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 871 DATIWGALLGSCRIHGHLEYA 891
+ T W ++ +HG + A
Sbjct: 486 EVT-WNTMISGYGLHGQGQEA 505
Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 245/552 (44%), Gaps = 50/552 (9%)
Query: 166 SITNSPTSLALPPTDTLAKQAQLSCISSGFCF-LNETNKFRCLSSVKSKHAQMIKMGKIW 224
S+ SP S +L L K L SS + F ++ + FR + + H Q + G
Sbjct: 94 SVNESPHS-SLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG--C 150
Query: 225 NSDDMVKS-LIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWG 283
+S+ ++ S ++ Y +F A K F + W++ + Y V E ++V+
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV-ESIQVFR 209
Query: 284 ELHGKGVI-FRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKC 342
+L + + L IL +L LG+++H+ K G ++ ++ Y KC
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269
Query: 343 RDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKM 402
++ + LF E D + +N +I N + E ++ LF+E+ S A+ S T+V +
Sbjct: 270 GKIKMGSALFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 403 LQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNL 462
+ + + IHGY LKS S+ SV L ++YS+ N++E A ++FD + +L
Sbjct: 329 VPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 463 SSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRG 522
SWN+MIS YT G + A SLF +M S P+ +T C+LS
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS----------------- 428
Query: 523 MQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDC 582
A +L L G+ H + + +YV T+L+ MY K
Sbjct: 429 ------------------ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 583 LQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSG 642
+ A+ +FD M +N V WN++ISGY G A + +M I P V++ ++
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 643 YSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIKP 701
S G KE I + M + G P+V + ++ + + + +L+F M I+P
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS---IEP 587
Query: 702 NSTTMSSLLQTC 713
S+ +LL C
Sbjct: 588 GSSVWETLLGAC 599
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330 OS=Arabidopsis
thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/676 (33%), Positives = 339/676 (50%), Gaps = 104/676 (15%)
Query: 402 MLQACAKVGAFHEGKQIHGYVLKS-ALESNLSVCNCLISMYSRNNKLELATRVFDSMKDH 460
+L AC + H G +I +L + +L N + + LI+++S +L+LA ++FD + D
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 461 NLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLL 520
+L L K+ W + G+ +GS ++ L +
Sbjct: 197 SL---------------------LTEKV-----------WAAMAIGYSRNGSPRDALIVY 224
Query: 521 RGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKN 580
M P S+SV L+A +L+ L+ GR H I++
Sbjct: 225 VDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKR------------------- 265
Query: 581 DCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLV 640
+E D V +N L+ Y GLF +A+K+ + M E
Sbjct: 266 ------KEKVDQ------VVYNVLLKLYMESGLFDDARKVFDGMSER------------- 300
Query: 641 SGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQEDIK 700
NVVTW SLIS + E F +MQ+E I
Sbjct: 301 --------------------------NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIG 334
Query: 701 PNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREV 760
+ T++++L C + L GKEIH LK+ D + L+DMY K G ++ +R V
Sbjct: 335 FSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394
Query: 761 FRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLAACKNSGLV 820
F K LASWN M+ +AI GN +E I LF ++E+G PD ITF ALL+ C ++GL
Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454
Query: 821 EEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLG 880
E G F+ M T++ + P +EHY+C+VD+LG+AG + EA I TMPFKP A+IWG+LL
Sbjct: 455 EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 881 SCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSV 940
SCR+HG++ EIA++ LF LEP N NY ++ N+ A + W++V+++R M + GVK
Sbjct: 515 SCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKE 574
Query: 941 LVWSWIQIDQIVHVFSAEGAPHPATGEIYFELYHLVSE-MKKLGYVPDTRCVYQDIDEEE 999
SW+Q+ + +F A G + Y +++ + E ++K GY P+T V D+DEE
Sbjct: 575 AGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEET 634
Query: 1000 KGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGA 1059
K + H+E+LA Y L+ T PIR+ KN RVC+DCH+ K +S V R I LRD
Sbjct: 635 KANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTK 694
Query: 1060 RFHHFREGECSCNDCW 1075
RFHHF +G CSC D W
Sbjct: 695 RFHHFVDGICSCKDYW 710
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 177/382 (46%), Gaps = 41/382 (10%)
Query: 335 LMNFYGKCRDVESANKLFSEVSD--LEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
L+ + CR ++ A K+F +V+D L + +W + + RN +A+ ++ +M S
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 393 KAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATR 452
+ + +I L+AC + G+ IH ++K + + V N L+ +Y + + A +
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
VFD M + N+ +WNS+IS + V ++LF KM I
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI------------------- 333
Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
GF + ++++ +L A + + L G+E H IL++ D+ + S
Sbjct: 334 --------------GF--SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS 377
Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
LMDMY K ++ ++ VFD M +++ +WN +++ Y G + M E + PD
Sbjct: 378 LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD 437
Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKFF 691
+++ +L+SG S G ++ L + MK + P + + L+ + +E++K
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVI 497
Query: 692 IQMQQEDIKPNSTTMSSLLQTC 713
M KP+++ SLL +C
Sbjct: 498 ETMP---FKPSASIWGSLLNSC 516
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 1/229 (0%)
Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVS 356
+++ LK C L +G +HA ++KR D + L+ Y + + A K+F +S
Sbjct: 239 ISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS 298
Query: 357 DLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGK 416
+ + + WN +I V + + LFR+MQ T+ +L AC++V A GK
Sbjct: 299 E-RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGK 357
Query: 417 QIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLG 476
+IH +LKS + ++ + N L+ MY + ++E + RVFD M +L+SWN M++ Y G
Sbjct: 358 EIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAING 417
Query: 477 YVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
++ +LF M S + PD IT+ LLSG G + L+L M++
Sbjct: 418 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKT 466
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 15/275 (5%)
Query: 214 HAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFG 272
HAQ++K + D +V +++ Y+E G F A K F R+ W+S + S
Sbjct: 259 HAQIVKRKE--KVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLIS-VLSKK 315
Query: 273 GEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLK 332
V E+ ++ ++ + + F LT IL C+++ A G E+HA ++K DV L
Sbjct: 316 VRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 375
Query: 333 CALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSA 392
+LM+ YGKC +VE + ++F +V +D WN ++ N E I LF M S
Sbjct: 376 NSLMDMYGKCGEVEYSRRVF-DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 393 KAISRTIVKMLQACAKVGAFHEG-----KQIHGYVLKSALESNLSVCNCLISMYSRNNKL 447
T V +L C+ G G + + + ALE CL+ + R K+
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHY----ACLVDILGRAGKI 490
Query: 448 ELATRVFDSMK-DHNLSSWNSMISSYTGLGYVDVA 481
+ A +V ++M + S W S+++S G V V
Sbjct: 491 KEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVG 525
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis
thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/643 (32%), Positives = 339/643 (52%), Gaps = 37/643 (5%)
Query: 466 NSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQS 525
N +I+ Y+ L + + A L ++ +R ++++W L+SG +G + L M+
Sbjct: 46 NYLINMYSKLDHPESA-RLVLRLTPAR---NVVSWTSLISGLAQNGHFSTALVEFFEMRR 101
Query: 526 LGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQN 585
G PN + +AV LRL G++ H ++ G D++VG S DMY K +
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 586 AQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSI 645
A+++FD + RN+ WN+ IS G A + + + P+ +++ + ++ S
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 646 W-----GQSKEALVI--------------------IHHMKNSGIY------PNVVTWTSL 674
W G LV+ +++S I N V+W SL
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 675 ISGSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGF 734
++ +QN ++ +++ +++ ++ + +SS+L C G+ L+ G+ IH +K
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 735 IKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHE 794
+ +V + L+DMY K G ++ + + F + K L + N +I G+A G A+ LF E
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 795 LLETGF--QPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGK 852
+ G P+ +TF +LL+AC +G VE G K FDSM + Y I P EHYSC+VD+LG+
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 853 AGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLM 912
AG ++ A++FI+ MP +P ++WGAL +CR+HG + +A+ LFKL+P +S N+ L+
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 521
Query: 913 MNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQIDQIVHVFSAEGAPHPATGEIYFEL 972
N A + RW + +R + VG+K +SWI + VH F A+ H EI L
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581
Query: 973 YHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNT 1032
L +EM+ GY PD + D++EEEK + H+EKLA+ +GL+ PIR+ KN
Sbjct: 582 AKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNL 641
Query: 1033 RVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGECSCNDCW 1075
R+C DCH+ K++S REI +RD RFH F++G CSC D W
Sbjct: 642 RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 221/512 (43%), Gaps = 43/512 (8%)
Query: 214 HAQMIKMGKIWNSDDMVKSLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGG 273
HA+++K + LI Y + SA L +R+ W+S + G
Sbjct: 29 HARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGH 88
Query: 274 EVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKC 333
L+E + E+ +GV+ K L G ++HA +K G DV + C
Sbjct: 89 FSTALVEFF-EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 334 ALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAK 393
+ + Y K R + A KLF E+ + + WN I + + + AI+ F E +
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLE-TWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206
Query: 394 AISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRV 453
S T L AC+ + G Q+HG VL+S ++++SVCN LI Y + ++ + +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266
Query: 454 FDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSY 513
F M N SW S++++Y + A L+ R + DI+ + +
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY-----LRSRKDIVETSDFM--------- 312
Query: 514 QNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSL 573
+S VL A + L+ GR H + ++ ++ ++VG++L
Sbjct: 313 ---------------------ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSAL 351
Query: 574 MDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEI--KP 631
+DMY K C++++++ FD M +N+V NSLI GY +G A + +M P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411
Query: 632 DLVSWNSLVSGYSIWGQSKEALVIIHHMKNS-GIYPNVVTWTSLISGSLQNENYRESLKF 690
+ +++ SL+S S G + + I M+++ GI P ++ ++ + + +F
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF 471
Query: 691 FIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNG 722
+M I+P + +L C G Q G
Sbjct: 472 IKKMP---IQPTISVWGALQNACRMHGKPQLG 500
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 166/362 (45%), Gaps = 8/362 (2%)
Query: 196 CFLNETNKFRCLSSVKSKHAQMIKMGKIWNSDDMVKSLIFH-YLEFGDFTSAAKAFFLYF 254
C R + K HA +K G+I D V F Y + A K F
Sbjct: 113 CAFKAVASLRLPVTGKQIHALAVKCGRIL--DVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 255 SRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVIFRSRILTIILKLCTKLMAFWLGV 314
R+ W++F+ + + G +E +E + E S L C+ + LG+
Sbjct: 171 ERNLETWNAFISNSVT-DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 229
Query: 315 EVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANKLFSEVSDLEDDLLWNEIIMVKLRN 374
++H +++ GFD DV + L++FYGKC+ + S+ +F+E+ ++ + W ++ ++N
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT-KNAVSWCSLVAAYVQN 288
Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
+ E A L+ + + I +L ACA + G+ IH + +K+ +E + V
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM--NSSR 492
+ L+ MY + +E + + FD M + NL + NS+I Y G VD+A +LF +M
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 493 IQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSL-GFRPNGSSVSVVLQAVTELRLLKYG 551
P+ +T+ LLS G+ +N + + M+S G P S ++ + +++
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 552 RE 553
E
Sbjct: 469 YE 470
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 183/429 (42%), Gaps = 36/429 (8%)
Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDL--YVGTSLMDMYVKNDCLQNAQE 588
+ ++ ++L+ ++ GR H I++ LD ++ L++MY K D ++A+
Sbjct: 5 SADALGLLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARL 63
Query: 589 VFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD----------LVSWNS 638
V RN+V+W SLISG G F A +M E + P+ + S
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123
Query: 639 LVSGYSIWGQSKEALVIIHHMKNSGIYP---------------------NVVTWTSLISG 677
V+G I + + I+ + N+ TW + IS
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183
Query: 678 SLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKD 737
S+ + RE+++ FI+ ++ D PNS T + L C L G ++H L L++GF D
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 738 AYVATGLIDMYSKSGNLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
V GLID Y K ++S+ +F + K SW ++ + ++A +L+ +
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 798 TGFQPDAITFTALLAACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLD 857
+ +++L+AC +E G + + + + TI S +VD+ GK G ++
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELG-RSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 858 EAWDFIRTMPFKPDATIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLA 917
++ MP K + +L+G G ++ A + + NY ++LL+
Sbjct: 363 DSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 918 MSNRWEDVE 926
+R VE
Sbjct: 422 ACSRAGAVE 430
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 121/537 (22%), Positives = 206/537 (38%), Gaps = 72/537 (13%)
Query: 297 LTIILKLCTKLMAFWLGVEVHASLIKR-GFDFDVHLKCALMNFYGKCRDVESANKLFSEV 355
L ++LK + LG VHA ++K L L+N Y K ESA +L +
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA-RLVLRL 67
Query: 356 SDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEG 415
+ + + W +I +N + A+ F EM+ T +A A + G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 416 KQIHGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGL 475
KQIH +K ++ V MY + + A ++FD + + NL +WN+ IS+
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 476 GYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRPNGSSV 535
G A F + + GH PN +
Sbjct: 188 GRPREAIEAFIEFRR-------------IDGH----------------------PNSITF 212
Query: 536 SVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKN 595
L A ++ L G + HG +LR+G D D+ V L+D Y K +++++ +F M
Sbjct: 213 CAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT 272
Query: 596 RNIVAWNSLISGYC-------FKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVS---GYSI 645
+N V+W SL++ Y L++ ++K + + + I L + + G SI
Sbjct: 273 KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI 332
Query: 646 WGQSKEALVIIHHMKNSGIY---------------------PNVVTWTSLISGSLQNENY 684
+ +A V S + N+VT SLI G
Sbjct: 333 HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV 392
Query: 685 RESLKFFIQMQQEDI--KPNSTTMSSLLQTCGGLGLLQNGKEI-HCLCLKNGFIKDAYVA 741
+L F +M PN T SLL C G ++NG +I + G A
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY 452
Query: 742 TGLIDMYSKSGNLKSAREVFRK-SANKTLASWNCMIMGFAIYGNGKEAILLFHELLE 797
+ ++DM ++G ++ A E +K T++ W + ++G + +L L +
Sbjct: 453 SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis
thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/684 (32%), Positives = 360/684 (52%), Gaps = 85/684 (12%)
Query: 400 VKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVCNCLISMYSRN-------NKLELATR 452
+ +LQ+C+ +F + K IHG++L++ L S++ V + L+++ + N L A
Sbjct: 16 LALLQSCS---SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 453 VFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGS 512
+F +++ NL +N +I ++ A+ + +M SRI PD IT+ L+
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI-------- 124
Query: 513 YQNVLTLLRGMQSLGFRPNGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTS 572
+A +E+ + G ++H I+R G D+YV S
Sbjct: 125 ---------------------------KASSEMECVLVGEQTHSQIVRFGFQNDVYVENS 157
Query: 573 LMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPD 632
L+ MY + A +F M R D
Sbjct: 158 LVHMYANCGFIAAAGRIFGQMGFR-----------------------------------D 182
Query: 633 LVSWNSLVSGYSIWGQSKEALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFI 692
+VSW S+V+GY G + A + M + N+ TW+ +I+G +N + +++ F
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFE 238
Query: 693 QMQQEDIKPNSTTMSSLLQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSG 752
M++E + N T M S++ +C LG L+ G+ + +K+ + + T L+DM+ + G
Sbjct: 239 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298
Query: 753 NLKSAREVFRKSANKTLASWNCMIMGFAIYGNGKEAILLFHELLETGFQPDAITFTALLA 812
+++ A VF SW+ +I G A++G+ +A+ F +++ GF P +TFTA+L+
Sbjct: 299 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
Query: 813 ACKNSGLVEEGWKYFDSMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDA 872
AC + GLVE+G + +++M D+ I P +EHY C+VD+LG+AG L EA +FI M KP+A
Sbjct: 359 ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNA 418
Query: 873 TIWGALLGSCRIHGHLEYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSM 932
I GALLG+C+I+ + E AE L K++P +S Y L+ N+ A + +W+ +E LR M
Sbjct: 419 PILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMM 478
Query: 933 DEVGVKSVLVWSWIQIDQIVHVFS-AEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCV 991
E VK WS I+ID ++ F+ + HP G+I + ++ +++ +GY +T
Sbjct: 479 KEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDA 538
Query: 992 YQDIDEEEKGKVLLSHTEKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGR 1051
+ D+DEEEK + H+EKLAI YG+MKTK IR++KN RVC DCHT K +S V GR
Sbjct: 539 FFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGR 598
Query: 1052 EIFLRDGARFHHFREGECSCNDCW 1075
E+ +RD RFHHFR G CSC D W
Sbjct: 599 ELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 124/270 (45%), Gaps = 36/270 (13%)
Query: 291 IFRSRI------LTIILKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRD 344
+ +SRI ++K +++ +G + H+ +++ GF DV+++ +L++ Y C
Sbjct: 108 MLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGF 167
Query: 345 VESANKLFSEVS------------------------DLEDDL------LWNEIIMVKLRN 374
+ +A ++F ++ ++ D++ W+ +I +N
Sbjct: 168 IAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKN 227
Query: 375 EKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALESNLSVC 434
+E AI LF M+ A +V ++ +CA +GA G++ + YV+KS + NL +
Sbjct: 228 NCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG 287
Query: 435 NCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKMNSSRIQ 494
L+ M+ R +E A VF+ + + + SW+S+I G+ A F++M S
Sbjct: 288 TALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI 347
Query: 495 PDIITWNCLLSGHFTHGSYQNVLTLLRGMQ 524
P +T+ +LS G + L + M+
Sbjct: 348 PRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380, chloroplastic
OS=Arabidopsis thaliana GN=PCMP-H48 PE=3 SV=1
Length = 632
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/607 (35%), Positives = 326/607 (53%), Gaps = 49/607 (8%)
Query: 471 SYTGLGYVDVAWSLFNKMNSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLGFRP 530
+Y G + + +LF++ I PD+ + ++ +G L + S P
Sbjct: 73 AYASHGKIRHSLALFHQT----IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINP 128
Query: 531 NGSSVSVVLQAVTELRLLKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVF 590
N + S +L++ + K G+ H ++L+ GL D YV T L+D+Y K + +AQ+VF
Sbjct: 129 NEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 591 DNMKNRNIVAWNSLISGYCFKGLFVNAKKMLNQMEEEEIKPDLVSWNSLVSGYSIWGQSK 650
D M R++V+ ++I+ Y +G A+ + + M E D+VSWN ++ GY+ G
Sbjct: 185 DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER----DIVSWNVMIDGYAQHG--- 237
Query: 651 EALVIIHHMKNSGIYPNVVTWTSLISGSLQNENYRESLKFFIQMQQE-DIKPNSTTMSSL 709
+PN ++L F ++ E KP+ T+ +
Sbjct: 238 --------------FPN------------------DALMLFQKLLAEGKPKPDEITVVAA 265
Query: 710 LQTCGGLGLLQNGKEIHCLCLKNGFIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTL 769
L C +G L+ G+ IH + + V TGLIDMYSK G+L+ A VF + K +
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 770 ASWNCMIMGFAIYGNGKEAILLFHELLE-TGFQPDAITFTALLAACKNSGLVEEGWKYFD 828
+WN MI G+A++G ++A+ LF+E+ TG QP ITF L AC ++GLV EG + F+
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385
Query: 829 SMSTDYNIIPTIEHYSCMVDLLGKAGYLDEAWDFIRTMPFKPDATIWGALLGSCRIHGHL 888
SM +Y I P IEHY C+V LLG+AG L A++ I+ M D+ +W ++LGSC++HG
Sbjct: 386 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
Query: 889 EYAEIASRRLFKLEPCNSANYNLMMNLLAMSNRWEDVERLRHSMDEVGVKSVLVWSWIQI 948
+ + L L NS Y L+ N+ A +E V ++R+ M E G+ S I+I
Sbjct: 446 VLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEI 505
Query: 949 DQIVHVFSAEGAPHPATGEIYFELYHLVSEMKKLGYVPDTRCVYQDIDEEEKGKVLLSHT 1008
+ VH F A H + EIY L + +K GYVP+T V QD++E EK + L H+
Sbjct: 506 ENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHS 565
Query: 1009 EKLAIVYGLMKTKSRAPIRVIKNTRVCSDCHTAAKYMSLVRGREIFLRDGARFHHFREGE 1068
E+LAI YGL+ TK +P+++ KN RVCSDCHT K +S + GR+I +RD RFHHF +G
Sbjct: 566 ERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGS 625
Query: 1069 CSCNDCW 1075
CSC D W
Sbjct: 626 CSCGDFW 632
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 227/481 (47%), Gaps = 40/481 (8%)
Query: 314 VEVHASLIKRGFDFDVHLKCALMNF-----YGKCRDVESANKLFSEVSDLEDDLLWNEII 368
+++HA++++ + +H + ++N Y + + LF + D D L+ I
Sbjct: 46 LQIHAAILRH--NLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID-PDLFLFTAAI 102
Query: 369 MVKLRNEKWENAIKLFREMQFSSAKAISRTIVKMLQACAKVGAFHEGKQIHGYVLKSALE 428
N + A L+ ++ S T +L++C+ GK IH +VLK L
Sbjct: 103 NTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLG 158
Query: 429 SNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSSWNSMISSYTGLGYVDVAWSLFNKM 488
+ V L+ +Y++ + A +VFD M + +L S +MI+ Y G V+ A +LF+ M
Sbjct: 159 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 218
Query: 489 NSSRIQPDIITWNCLLSGHFTHGSYQNVLTLLRGMQSLG-FRPNGSSVSVVLQAVTELRL 547
+ DI++WN ++ G+ HG + L L + + + G +P+ +V L A +++
Sbjct: 219 ----CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGA 274
Query: 548 LKYGRESHGYILRNGLDYDLYVGTSLMDMYVKNDCLQNAQEVFDNMKNRNIVAWNSLISG 607
L+ GR H ++ + + ++ V T L+DMY K L+ A VF++ ++IVAWN++I+G
Sbjct: 275 LETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAG 334
Query: 608 YCFKGLFVNAKKMLNQMEE-EEIKPDLVSWNSLVSGYSIWGQSKEALVIIHHM-KNSGIY 665
Y G +A ++ N+M+ ++P +++ + + G E + I M + GI
Sbjct: 335 YAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIK 394
Query: 666 PNVVTWTSLIS-----GSLQNENYRESLKFFIQMQQEDIKPNSTTMSSLLQTCGGLGLLQ 720
P + + L+S G L+ + + ++ ++ +S SS+L +C G
Sbjct: 395 PKIEHYGCLVSLLGRAGQLK--------RAYETIKNMNMDADSVLWSSVLGSCKLHGDFV 446
Query: 721 NGKEIH----CLCLKNG----FIKDAYVATGLIDMYSKSGNLKSAREVFRKSANKTLASW 772
GKEI L +KN + + Y + G + +K NL + + ++ T+
Sbjct: 447 LGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIE 506
Query: 773 N 773
N
Sbjct: 507 N 507
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 20/251 (7%)
Query: 232 SLIFHYLEFGDFTSAAKAFFLYFSRSYADWSSFLEDYESFGGEVQELLEVWGELHGKGVI 291
++I Y + G+ +A F R W+ ++ Y G + L ++ +L +G
Sbjct: 197 AMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFP-NDALMLFQKLLAEGKP 255
Query: 292 FRSRILTII-LKLCTKLMAFWLGVEVHASLIKRGFDFDVHLKCALMNFYGKCRDVESANK 350
I + L C+++ A G +H + +V + L++ Y KC +E A
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 351 LFSEVSDLEDDLLWNEIIMVKLRNEKWENAIKLFREMQ-FSSAKAISRTIVKMLQACAKV 409
+F++ + +D + WN +I + ++A++LF EMQ + + T + LQACA
Sbjct: 316 VFND-TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 374
Query: 410 GAFHEGKQI-----HGYVLKSALESNLSVCNCLISMYSRNNKLELATRVFDSMKDHNLSS 464
G +EG +I Y +K +E CL+S+ R +L+ R ++++K+ N+ +
Sbjct: 375 GLVNEGIRIFESMGQEYGIKPKIEHY----GCLVSLLGRAGQLK---RAYETIKNMNMDA 427
Query: 465 ----WNSMISS 471
W+S++ S
Sbjct: 428 DSVLWSSVLGS 438
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 392,804,868
Number of Sequences: 539616
Number of extensions: 16317372
Number of successful extensions: 50981
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 38324
Number of HSP's gapped (non-prelim): 2999
length of query: 1076
length of database: 191,569,459
effective HSP length: 128
effective length of query: 948
effective length of database: 122,498,611
effective search space: 116128683228
effective search space used: 116128683228
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)