BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038365
         (148 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P25140|IL3_MACMU Interleukin-3 OS=Macaca mulatta GN=IL3 PE=2 SV=1
          Length = 143

 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 69  FPAVDFS-LIESDEDVLWKANVRETNEEVAARGLKFMNCMTGSDSSSTNYPGKIPSALDL 127
            P+ DF+ L E D+ +L + N+R +N E  ++ +K +   +  +S   N P  +P A   
Sbjct: 51  LPSPDFNNLNEEDQTILVEKNLRRSNLEAFSKAVKSLQNASAIESILKNLPPCLPMATAA 110

Query: 128 PA 129
           P 
Sbjct: 111 PT 112


>sp|Q9VM75|HEAT1_DROME HEAT repeat-containing protein 1 homolog OS=Drosophila melanogaster
            GN=l(2)k09022 PE=2 SV=2
          Length = 2096

 Score = 31.2 bits (69), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 9/71 (12%)

Query: 82   DVLWK-------ANVRETNEEVAARGLKFMNCMTGSDSSSTNYPGKIPSALDLPADIAER 134
            DV+WK          R +N EV  R L F +C+  +     +Y   +P  +   A++ E 
Sbjct: 2011 DVMWKQLNSQVLLKTRTSNPEV--RILAFNSCVAIARKLGESYAALLPETVPFIAELLED 2068

Query: 135  SHEKEDADTNS 145
             H++ + +T +
Sbjct: 2069 EHQRVEKNTRT 2079


>sp|P53059|MNT2_YEAST Alpha-1,3-mannosyltransferase MNT2 OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=MNT2 PE=1 SV=1
          Length = 558

 Score = 30.8 bits (68), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 68  LFPAVDFSLIESDEDVLWKANVRETNEEVAARGLKF 103
           LFP ++F  +E+DE   W    R   E   A  L+F
Sbjct: 105 LFPYINFEKLETDESAFWHTTTRWNGEVYHASMLEF 140


>sp|Q9R9J0|MYCB_BACIU Mycosubtilin synthase subunit B OS=Bacillus subtilis GN=mycB PE=3
            SV=1
          Length = 5369

 Score = 30.4 bits (67), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 10/43 (23%)

Query: 15   MVRHAQGLHNVDGDKN--YKAY--------LSPEYFDAPVTQL 47
            ++ H Q +H ++G +N  Y AY        L+P YFDA V Q+
Sbjct: 3447 LIEHRQVIHLIEGLRNAVYSAYDGVLHVAMLAPYYFDASVQQI 3489


>sp|P06740|IL3_HYLLA Interleukin-3 OS=Hylobates lar GN=IL3 PE=2 SV=1
          Length = 152

 Score = 30.0 bits (66), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 69  FPAVDFS-LIESDEDVLWKANVRETNEEVAARGLKFMNCMTGSDSSSTNYPGKIPSALDL 127
            P +DF+ L   D+D+L + N+R  N E   + +K +   +  +S   N P  +P A   
Sbjct: 51  LPLLDFNNLNGEDQDILMENNLRRPNLEAFNKAVKSLQNASAIESILKNLPPCLPMATAA 110

Query: 128 PA 129
           P 
Sbjct: 111 PT 112


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.131    0.388 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,562,210
Number of Sequences: 539616
Number of extensions: 2317253
Number of successful extensions: 3521
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3518
Number of HSP's gapped (non-prelim): 8
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)