BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038366
(169 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 205 bits (522), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 125/148 (84%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE +E+I +MIAD+DKDGSG
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 80 IDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIH 139
ID +EF MMTAK+GERDS+EE+MKAF + D D GKIS ++KR+A+ELG N TD E+
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQ 120
Query: 140 EMVEEADRDHDGEVNADEFIRMMKRTTF 167
EM++EADRD DGEVN +EF R+MK+T+
Sbjct: 121 EMIDEADRDGDGEVNEEEFFRIMKKTSL 148
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 202 bits (513), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 133/159 (83%), Gaps = 1/159 (0%)
Query: 9 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM 68
+R+D+ +GR GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE +E+I +M
Sbjct: 11 ARRDQKKGRV-GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM 69
Query: 69 IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARE 128
I+++DKDGSG ID +EF MMTAK+GERDS+EE++KAF + D DN+G I+ D++R+A+E
Sbjct: 70 ISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKE 129
Query: 129 LGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTTF 167
LG N T+ E+ EM+ EADR+ D E++ DEFIR+MK+T+
Sbjct: 130 LGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 171 bits (434), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 80/143 (55%), Positives = 116/143 (81%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
++++KQEI+EAF+LFD DG+GTID KEL VAMRALGFE +E+I +MI+++DK+G+G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 82 LDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEM 141
+F +MT K+ E+D+KEE++KAF + D D GKIS ++KR+A+ELG N TD E+ EM
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 142 VEEADRDHDGEVNADEFIRMMKR 164
++EADRD DGEV+ EF+R+MK+
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMKK 143
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 149 bits (377), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 120/171 (70%), Gaps = 4/171 (2%)
Query: 1 MASLYK----GVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL 56
MAS +K S + K L++++KQEI+EAF+LFD DG+GTID KEL VA RAL
Sbjct: 1 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRAL 60
Query: 57 GFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGK 116
GFE +E+I + I+++DK+G+G + +F + T K E+D+KEE++KAF + D D GK
Sbjct: 61 GFEPKKEEIKKXISEIDKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGK 120
Query: 117 ISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTTF 167
IS ++KR+A+ELG N TD E+ E ++EADRD DGEV+ EF+R+ K+T+
Sbjct: 121 ISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIXKKTSL 171
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 96/142 (67%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF +M K+ E+DS+EEL++AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG +N +EF+RMM
Sbjct: 124 MIREADIDGDGHINYEEFVRMM 145
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 23 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDL 82
Q ++E+ EAF++FD DG+G I A EL M LG ++T++++++MI + D DG G I+
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 83 DEFEHMMTAK 92
+EF MM +K
Sbjct: 139 EEFVRMMVSK 148
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 161 MMKR 164
+M R
Sbjct: 71 LMAR 74
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 96/142 (67%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF +M K+ E+DS+EEL++AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG +N +EF+RMM
Sbjct: 124 MIREADIDGDGHINYEEFVRMM 145
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 23 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDL 82
Q ++E+ EAF++FD DG+G I A EL M LG ++T++++++MI + D DG G I+
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 83 DEFEHMMTAK 92
+EF MM +K
Sbjct: 139 EEFVRMMVSK 148
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 161 MMKR 164
+M R
Sbjct: 71 LMAR 74
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 87 HMMTAK 92
MMTAK
Sbjct: 444 QMMTAK 449
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 161 MMKR 164
MM R
Sbjct: 372 MMAR 375
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 87 HMMTAK 92
MMTAK
Sbjct: 444 QMMTAK 449
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 161 MMKR 164
MM R
Sbjct: 372 MMAR 375
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 426 MIREADIDGDGQVNYEEFVQMM 447
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 385 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 444
Query: 87 HMMTAK 92
MMTAK
Sbjct: 445 QMMTAK 450
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
Query: 161 MMKR 164
MM R
Sbjct: 373 MMAR 376
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 391 MIREADIDGDGQVNYEEFVQMM 412
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 349 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 409 VQMMTAK 415
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 161 MMKR 164
MM R
Sbjct: 338 MMAR 341
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 391 MIREADIDGDGQVNYEEFVQMM 412
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 349 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 409 VQMMTAK 415
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 161 MMKR 164
MM R
Sbjct: 338 MMAR 341
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 388 MIREADIDGDGQVNYEEFVQMM 409
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 346 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 405
Query: 86 EHMMTA 91
MMTA
Sbjct: 406 VQMMTA 411
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 161 MMKR 164
MM R
Sbjct: 335 MMAR 338
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 87 HMMTAK 92
MMTAK
Sbjct: 444 QMMTAK 449
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 161 MMKR 164
MM R
Sbjct: 372 MMAR 375
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG G I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 424 MIREADIDGDGQVNYEEFVQMM 445
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 383 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 87 HMMTAK 92
MMTAK
Sbjct: 443 QMMTAK 448
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D DG ++ EF+
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 161 MMKR 164
MM R
Sbjct: 371 MMAR 374
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 137 bits (344), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG G I
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 415
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 416 MIREADIDGDGQVNYEEFVQMM 437
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 375 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 434
Query: 87 HMMTAK 92
MMTAK
Sbjct: 435 QMMTAK 440
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D DG ++ EF+
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLI 362
Query: 161 MMKR 164
MM R
Sbjct: 363 MMAR 366
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 93/142 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG G I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 424 MIREADIDGDGQVNYEEFVQMM 445
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 383 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 87 HMMTAK 92
MMTAK
Sbjct: 443 QMMTAK 448
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D DG ++ EF+
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 161 MMKR 164
MM R
Sbjct: 371 MMAR 374
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 93/142 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 384 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
Query: 87 HMMTAK 92
MMTAK
Sbjct: 444 QMMTAK 449
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D DG ++ EF+
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 371
Query: 161 MMKR 164
MM R
Sbjct: 372 MMAR 375
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 93/142 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG G I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 424 MIREADIDGDGQVNYEEFVQMM 445
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 383 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
Query: 87 HMMTAK 92
MMTAK
Sbjct: 443 QMMTAK 448
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D DG ++ EF+
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 161 MMKR 164
MM R
Sbjct: 371 MMAR 374
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 121 MIREADIDGDGQVNYEEFVQMM 142
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 79 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 138
Query: 86 EHMMTA 91
MMTA
Sbjct: 139 VQMMTA 144
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 161 MMKR 164
MM R
Sbjct: 68 MMAR 71
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 68 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 127
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 128 MIREADIDGDGQVNYEEFVQMM 149
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 86 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 145
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 146 VQMMTAK 152
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 74
Query: 161 MMKR 164
MM R
Sbjct: 75 MMAR 78
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAKI 93
MMTAK+
Sbjct: 143 VQMMTAKL 150
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 143 VQMMTAK 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 140 VQMMTAK 146
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 161 MMKR 164
MM R
Sbjct: 69 MMAR 72
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 86 EHMMT 90
MMT
Sbjct: 140 VQMMT 144
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 161 MMKR 164
MM R
Sbjct: 69 MMAR 72
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 143 VQMMTAK 149
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 66 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 125
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 126 MIREADIDGDGQVNYEEFVQMM 147
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 84 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 143
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 144 VQMMTAK 150
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
Query: 161 MMKR 164
MM R
Sbjct: 73 MMAR 76
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 136 bits (343), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 129
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 130 MIREADIDGDGQVNYEEFVQMM 151
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 88 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 147
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 148 VQMMTAK 154
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Query: 161 MMKR 164
MM R
Sbjct: 77 MMAR 80
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 136 bits (343), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 142 VQMMTAK 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 136 bits (342), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 86 EHMMTA 91
MMTA
Sbjct: 142 VQMMTA 147
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 136 bits (342), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG +T+E++++MI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 143 VQMMTAK 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 136 bits (342), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG +T+E++++MI + D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 142 VQMMTAK 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 136 bits (342), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 143 VQMMTAK 149
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 123 MIREADIDGDGQVNYEEFVQMM 144
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 81 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 140
Query: 86 EHMMT 90
MMT
Sbjct: 141 VQMMT 145
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 161 MMKR 164
MM R
Sbjct: 70 MMAR 73
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM + + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 443 VQMMTAK 449
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 161 MMKR 164
MM R
Sbjct: 372 MMAR 375
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 135 bits (341), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 142 VQMMTAK 148
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D DG ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF+ MM
Sbjct: 125 MIREADIDGDGQVNYEEFVTMM 146
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
MMT+K
Sbjct: 143 VTMMTSK 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ +
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQ 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF++MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E+++QMI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 143 VQMMTAK 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF+ MM
Sbjct: 125 MIREADIDGDGQVNYEEFVTMM 146
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
MMT K
Sbjct: 143 VTMMTTK 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF+ MM
Sbjct: 124 MIREADIDGDGQVNYEEFVTMM 145
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
MMT+K
Sbjct: 142 VTMMTSK 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF+ MM
Sbjct: 124 MIREADIDGDGQVNYEEFVTMM 145
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 142 VTMMTAK 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EA+ D DG+VN +EF++MM
Sbjct: 124 MIREANIDGDGQVNYEEFVQMM 145
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + + DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 142 VQMMTAK 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 94/141 (66%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G ID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 82 LDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEM 141
EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 142 VEEADRDHDGEVNADEFIRMM 162
+ EAD D DG+VN +EF++MM
Sbjct: 123 IREADIDGDGQVNYEEFVQMM 143
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 140 VQMMTAK 146
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 161 MMKR 164
MM R
Sbjct: 69 MMAR 72
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 94/141 (66%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G ID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 82 LDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEM 141
EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 142 VEEADRDHDGEVNADEFIRMM 162
+ EAD D DG+VN +EF++MM
Sbjct: 121 IREADIDGDGQVNYEEFVQMM 141
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 78 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 137
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 138 VQMMTAK 144
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 161 MMKR 164
MM R
Sbjct: 67 MMAR 70
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++ + E KEAF LFD DG G I KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF ++M K+ + DS+EEL +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG++N DEF+++M
Sbjct: 125 MIREADVDGDGQINYDEFVKVM 146
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E+KEAF +FD D +G I A EL M LG ++T+E++++MI + D DG G I+ DEF
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEF 142
Query: 86 EHMMTAK 92
+M AK
Sbjct: 143 VKVMMAK 149
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 157 EFIRMMKR 164
EF+ +M R
Sbjct: 68 EFLNLMAR 75
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 94/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ E+D D DG+VN +EF+ MM
Sbjct: 125 MIRESDIDGDGQVNYEEFVTMM 146
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
MMT+K
Sbjct: 143 VTMMTSK 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 134 bits (336), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L+ ++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF ++M K+ + DS+EEL +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF+++M
Sbjct: 121 MIREADVDGDGQVNYEEFVQVM 142
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E+KEAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 79 EEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 138
Query: 86 EHMMTAK 92
+M AK
Sbjct: 139 VQVMMAK 145
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 161 MMKR 164
+M R
Sbjct: 68 LMAR 71
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 134 bits (336), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L+ ++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF ++M K+ + DS+EEL +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF+++M
Sbjct: 124 MIREADVDGDGQVNYEEFVQVM 145
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E+KEAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 82 EEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
+M AK
Sbjct: 142 VQVMMAK 148
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 161 MMKR 164
+M R
Sbjct: 71 LMAR 74
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L+ ++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF ++M K+ + DS+E+L +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF+++M
Sbjct: 124 MIREADVDGDGQVNYEEFVQVM 145
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++++KEAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 82 EEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
+M AK
Sbjct: 142 VQVMMAK 148
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 161 MMKR 164
+M R
Sbjct: 71 LMAR 74
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%), Gaps = 2/142 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ +DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTMMARKM--KDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 121
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG+VN +EF+ MM
Sbjct: 122 MIREADIDGDGQVNYEEFVTMM 143
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 80 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 86 EHMMTAK 92
MMT+K
Sbjct: 140 VTMMTSK 146
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 131 bits (330), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 93/142 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L+ + E KEAF LFD DG G I KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF ++M K+ + DS+EEL +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EAD D DG++N +EF+++M
Sbjct: 125 MIREADVDGDGQINYEEFVKVM 146
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E+KEAF +FD D +G I A EL M LG ++T+E++++MI + D DG G I+ +EF
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142
Query: 86 EHMMTAK 92
+M AK
Sbjct: 143 VKVMMAK 149
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 157 EFIRMMKR 164
EF+ +M R
Sbjct: 68 EFLNLMAR 75
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 129 bits (325), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 97/142 (68%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS+++ + KEAF LFD DG G I +EL +R+L TEE++ MI++VD DG+G I
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ DEF +M K+ + D++EEL +AF + D+D NG ISA +++ + LG TD E+ +
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQ 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M++EAD D DG+VN +EF++MM
Sbjct: 124 MIKEADLDGDGQVNYEEFVKMM 145
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 104 KAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMK 163
+AF + D+D +G I+ ++ + R L N T+ E+ +M+ E D D +G + DEF+ +M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 164 R 164
+
Sbjct: 74 K 74
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G ID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 82 LDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEM 141
EF MM K+ + DS EE+ +AF + D+D NG ISA +++ + LG TD E+ EM
Sbjct: 61 FPEFLTMMARKMKDTDS-EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 142 VEEADRDHDGEVNADEFIRMM 162
+ EA+ D DG+VN +EF++MM
Sbjct: 120 IREANIDGDGQVNYEEFVQMM 140
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + + DG G ++ +EF
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
Query: 87 HMMTA 91
MMTA
Sbjct: 138 QMMTA 142
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 161 MMKR 164
MM R
Sbjct: 67 MMAR 70
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 95/142 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG G I +EL MR+LG TE ++ M++++D+DG+G +
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF MM K+ + D++EE+ +AF + D+D NG +SA +++ + LG +D E+ E
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ AD D DG+VN +EF+R++
Sbjct: 124 MIRAADTDGDGQVNYEEFVRVL 145
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 46/67 (68%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G + A EL M LG ++++E++++MI D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
++ +K
Sbjct: 142 VRVLVSK 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E DRD +G V+ EF+
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 90/142 (63%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG G I K+L MR+LG TE ++ MI +V DG+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D +F MM K+ + DS+EE+ +AF + +D NG ISA ++ + LG TD E+ E
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
M+ EA D DG+VN ++F++MM
Sbjct: 425 MIREAGIDGDGQVNYEQFVQMM 446
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+EI+EAF +F DG+G I A +L M LG ++T+E++++MI + DG G ++ ++F
Sbjct: 384 EEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFV 443
Query: 87 HMMTAK 92
MMTAK
Sbjct: 444 QMMTAK 449
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ + + R LG N T+ E+ +M+ E D +G ++ +F+
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLT 371
Query: 161 MMKR 164
MM R
Sbjct: 372 MMAR 375
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 93/139 (66%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L +++KQEI EAF LFD + G +D EL VAM+ALGFE+ + +I +I + D +G +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D+F +M KI +RD +E+ +AF + D D+ GKIS +++R+A+ELG TD E+
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 141 MVEEADRDHDGEVNADEFI 159
M+EE D D DGE+N +EFI
Sbjct: 137 MIEEFDLDGDGEINENEFI 155
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
+ K+E+ +AF + D +N+G + ++K + LG REI ++++E D + + D
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 157 EFIRMM 162
+F +M
Sbjct: 80 DFYIVM 85
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 87/140 (62%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL R+LG TE ++ I +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF K + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIR 160
+ EAD D DG+VN +EF++
Sbjct: 124 XIREADIDGDGQVNYEEFVQ 143
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL LG ++T+E++++ I + D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
TAK
Sbjct: 142 VQXXTAK 148
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ + + E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
R
Sbjct: 71 XXAR 74
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 117 bits (293), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 87/140 (62%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL R+LG TE ++ I +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF K + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ +
Sbjct: 65 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQ 124
Query: 141 MVEEADRDHDGEVNADEFIR 160
+ EAD D DG+VN +EF++
Sbjct: 125 XIREADIDGDGQVNYEEFVQ 144
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL LG ++T+E+++Q I + D DG G ++ +EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
Query: 86 EHMMTAK 92
TAK
Sbjct: 143 VQXXTAK 149
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ + + E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
R
Sbjct: 72 XXAR 75
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 116 bits (290), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 86/140 (61%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL R+LG TE ++ I +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ EF + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ E
Sbjct: 64 NFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDE 123
Query: 141 MVEEADRDHDGEVNADEFIR 160
+ EAD D DG+VN +EF++
Sbjct: 124 XIREADIDGDGQVNYEEFVQ 143
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL LG ++T+E++++ I + D DG G ++ +EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Query: 86 EHMMTAK 92
TAK
Sbjct: 142 VQXXTAK 148
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ + + E D D +G +N EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLT 70
Query: 161 MMKRT 165
R
Sbjct: 71 XXARC 75
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Query: 9 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM 68
+R+D+ +GR GL++++KQEI+EAF+LFDTDGSGTIDAKEL VAMRALGFE +E+I +M
Sbjct: 13 ARRDQKKGRV-GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKM 71
Query: 69 IADVDKDGSGAIDLDEFEHMMTAKI 93
I+++DKDGSG ID +EF MMTAK+
Sbjct: 72 ISEIDKDGSGTIDFEEFLTMMTAKM 96
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
+ K+E+ +AF + D D +G I A ++K R LG EI +M+ E D+D G ++ +
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 157 EFIRMM 162
EF+ MM
Sbjct: 87 EFLTMM 92
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L +++KQEI EAF LFD + G +D EL VA +ALGFE+ + +I +I + D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D+F + KI +RD +E+ +AF + D D+ GKIS +++R+A+ELG TD E+
Sbjct: 77 KYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 141 MVEEADRDHDGEVNADEFIRMM 162
+EE D D DGE+N +EFI +
Sbjct: 137 XIEEFDLDGDGEINENEFIAIC 158
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 81 DLDEFEHMMTAKIGER---DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
D +EF MM ++ E S+EEL + F I D++ +G I A ++ I R G + TD E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
I ++++ D+++DG ++ DEF++MM+
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG T E+ ++EE D D G ++ +EF+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 161 MMKR 164
MM R
Sbjct: 78 MMVR 81
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Query: 19 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
L++++ E KEAF LFD D SG+I A EL MR+LG +E ++ ++ ++D DG+
Sbjct: 3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNH 62
Query: 79 AIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREI 138
AI+ EF +M+ ++ DS++EL++AF + D++ +G ISA ++K + +G TD E+
Sbjct: 63 AIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 122
Query: 139 HEMVEEADRDHDGEVNADEFIRMMKR 164
EM+ E D GE+N +F ++ +
Sbjct: 123 DEMLREV-SDGSGEINIKQFAALLSK 147
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 81 DLDEFEHMMTAKIGER---DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
D +EF MM ++ E S+EEL + F I D++ +G I A ++ I R G + TD E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
I ++++ D+++DG ++ DEF++MM+
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG T E+ ++EE D D G ++ +EF+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 161 MMKR 164
MM R
Sbjct: 78 MMVR 81
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD D +G+I + EL MR+LG +E ++N ++ ++D DG+ I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ EF +M+ ++ DS++EL++AF + D++ +G ISA ++K + +G TD E+ +
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 124
Query: 141 MVEEADRDHDGEVNADEFIRMMKR 164
M+ E D GE+N +F ++ +
Sbjct: 125 MLREVS-DGSGEINIQQFAALLSK 147
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD D +G+I + EL MR+LG +E ++N ++ ++D DG+ I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ EF +M+ ++ DS++EL++AF + D++ +G ISA ++K + +G TD E+ +
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 123
Query: 141 MVEEADRDHDGEVNADEFIRMMKR 164
M+ E D GE+N +F ++ +
Sbjct: 124 MLREV-SDGSGEINIQQFAALLSK 146
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 90/144 (62%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E K+AF FD +G+G I +EL MR LG TE ++ +IA+ + + +G +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ EF +M ++ E D++EE+ +AF I D+D +G IS +++ + LG TD EI E
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDE 123
Query: 141 MVEEADRDHDGEVNADEFIRMMKR 164
M+ EAD D DG +N +EF+ M+ +
Sbjct: 124 MIREADFDGDGMINYEEFVWMISQ 147
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E++EAF++FD DG G I EL M LG ++T+E+I++MI + D DG G I+ +EF
Sbjct: 82 EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEF 141
Query: 86 EHMMTAK 92
M++ K
Sbjct: 142 VWMISQK 148
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 81 DLDEFEHMMTAKIGER---DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
D +EF MM ++ E S+EEL F I D++ +G I ++ I R G + T+ +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
I ++++++D+++DG ++ DEF++MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG N T E+ ++EE D D G ++ +EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 161 MMKR 164
MM R
Sbjct: 81 MMVR 84
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 81 DLDEFEHMMTAKIGER---DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
D +EF MM ++ E S+EEL F I D++ +G I ++ I R G + T+ +
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
I ++++++D+++DG ++ DEF++MM+
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMME 156
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG N T E+ ++EE D D G ++ +EF+
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 161 MMKR 164
MM R
Sbjct: 78 MMVR 81
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 81 DLDEFEHMMTAKIGER---DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
D +EF MM ++ E S+EEL F I D++ +G I ++ I R G + T+ +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
I ++++++D+++DG ++ DEF++MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG N T E+ ++EE D D G ++ +EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 161 MMKR 164
MM R
Sbjct: 81 MMVR 84
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 81 DLDEFEHMMTAKIGER---DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
D +EF MM ++ E S+EEL F I D++ +G I ++ I R G + T+ +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
I ++++++D+++DG ++ DEF++MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG N T E+ ++EE D D G ++ +EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 161 MMKR 164
MM R
Sbjct: 81 MMVR 84
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 81 DLDEFEHMMTAKIGER---DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
D +EF MM ++ E S+EEL F I D++ +G I ++ I R G + + +
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
I ++++++D+++DG ++ DEF++MM+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG N T E+ ++EE D D G ++ +EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 161 MMKR 164
MM R
Sbjct: 81 MMVR 84
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 65/84 (77%)
Query: 84 EFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVE 143
+F +MT K+ E+D+KEE++KAF + D D GKIS ++KR+A+ELG N TD E+ EM++
Sbjct: 5 DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMID 64
Query: 144 EADRDHDGEVNADEFIRMMKRTTF 167
EADRD DGEV+ EF+R+MK+T+
Sbjct: 65 EADRDGDGEVSEQEFLRIMKKTSL 88
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
K+EI +AF+LFD D +G I K L + LG +T+E++ +MI + D+DG G + EF
Sbjct: 20 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
Query: 86 EHMM 89
+M
Sbjct: 80 LRIM 83
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 95.9 bits (237), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 61/78 (78%)
Query: 90 TAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDH 149
T K+ E+D+KEE++KAF + D D GKIS ++KR+A+ELG N TD E+ EM++EADRD
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 150 DGEVNADEFIRMMKRTTF 167
DGEV+ EF+R+MK+T+
Sbjct: 61 DGEVSEQEFLRIMKKTSL 78
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
K+EI +AF+LFD D +G I K L + LG +T+E++ +MI + D+DG G + EF
Sbjct: 10 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
Query: 86 EHMM 89
+M
Sbjct: 70 LRIM 73
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 77/118 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD D +G+I + EL MR+LG +E ++N ++ ++D DG+ I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREI 138
+ EF +M+ ++ DS++EL++AF + D++ +G ISA ++K + +G TD E+
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+DNNG IS+ ++ + R LG++ ++ E+++++ E D D + ++ EF+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 161 MMKR 164
+M R
Sbjct: 71 LMSR 74
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 59/74 (79%)
Query: 94 GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEV 153
GERDS+EE++KAF + D DN+G I+ D++R+A+ELG N T+ E+ EM+ EADR+ D E+
Sbjct: 3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEI 62
Query: 154 NADEFIRMMKRTTF 167
+ DEFIR+MK+T+
Sbjct: 63 DEDEFIRIMKKTSL 76
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI +AF LFD D SGTI K+L + LG +TEE++ +MIA+ D++ ID DEF
Sbjct: 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEF 67
Query: 86 EHMM 89
+M
Sbjct: 68 IRIM 71
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Query: 1 MASLYK----GVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL 56
MAS +K S + K L++++KQEI+EAF+LFD DG+GTID KEL VAMRAL
Sbjct: 1 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL 60
Query: 57 GFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIG 94
GFE +E+I +MI+++DK+G+G ++ +F +MT K+
Sbjct: 61 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMS 98
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
+ K+E+ +AF + D D G I ++K R LG EI +M+ E D++ G++N
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 157 EFIRMM 162
+F+ +M
Sbjct: 88 DFLTVM 93
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMTAKIGERD---SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
+D DEF MM + + S+EEL F + D++ +G I ++K + + G T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITED 131
Query: 137 EIHEMVEEADRDHDGEVNADEFIRMMK 163
+I E++++ D+++DG ++ DEF+ MK
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 9 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM 68
S KD +G+ +E+ + F ++D + G ID EL + ++A G +TE+ I ++
Sbjct: 84 SMKDDSKGKSE-------EELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEEL 136
Query: 69 IADVDKDGSGAIDLDEFEHMM 89
+ D DK+ G ID DEF M
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFM 157
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMTAKIGERD---SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
+D DEF MM + + S+EEL F + D++ +G I ++K + + G T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITED 131
Query: 137 EIHEMVEEADRDHDGEVNADEFIRMMK 163
+I E++++ D+++DG ++ DEF+ MK
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 9 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM 68
S KD +G+ +E+ + F +FD + G ID +EL + ++A G +TE+ I ++
Sbjct: 84 SMKDDSKGKSE-------EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEEL 136
Query: 69 IADVDKDGSGAIDLDEFEHMM 89
+ D DK+ G ID DEF M
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFM 157
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMTAKIGERDSK----EELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD 135
+D DEF MM + + DSK EEL F + D++ +G I ++K + + G T+
Sbjct: 72 VDFDEFLVMMVRSMKD-DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 136 REIHEMVEEADRDHDGEVNADEFIRMMK 163
+I E++++ D+++DG ++ DEF+ MK
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 9 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM 68
S KD +G+ +E+ + F +FD + G ID +EL + ++A G +TE+ I ++
Sbjct: 84 SMKDDSKGKTE-------EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEEL 136
Query: 69 IADVDKDGSGAIDLDEFEHMM 89
+ D DK+ G ID DEF M
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFM 157
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMTAKIGERD---SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
+D DEF MM + + S+EEL F + D++ +G I ++K + + G T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITED 131
Query: 137 EIHEMVEEADRDHDGEVNADEFIRMMK 163
+I E++++ D+++DG ++ DEF+ MK
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 9 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM 68
S KD +G+ +E+ + F + D + G ID EL + ++A G +TE+ I ++
Sbjct: 84 SMKDDSKGKSE-------EELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEEL 136
Query: 69 IADVDKDGSGAIDLDEFEHMM 89
+ D DK+ G ID DEF M
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFM 157
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMTAKIGERDSK----EELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD 135
+D DEF MM + + DSK EEL F + D++ +G I ++K + + G T+
Sbjct: 72 VDFDEFLVMM-VRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 136 REIHEMVEEADRDHDGEVNADEFIRMMK 163
+I E++++ D+++DG ++ DEF+ MK
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R
Sbjct: 77 FLVMMVRC 84
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMTAKIGERD---SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
+D DEF MM + + S+EEL F + D++ +G I ++K + + G T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITED 131
Query: 137 EIHEMVEEADRDHDGEVNADEFIRMMK 163
+I E++++ D+++DG ++ DE++ MK
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEWLEFMK 158
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 9 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM 68
S KD +G+ +E+ + F +FD + G ID EL + ++A G +TE+ I ++
Sbjct: 84 SMKDDSKGKSE-------EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEEL 136
Query: 69 IADVDKDGSGAIDLDEFEHMM 89
+ D DK+ G ID DE+ M
Sbjct: 137 MKDGDKNNDGRIDYDEWLEFM 157
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMTAKIGERD---SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
+D DEF MM + + S+EEL F + D++ +G I ++K + + G T+
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITED 131
Query: 137 EIHEMVEEADRDHDGEVNADEFIRMMK 163
+I E++++ D+++DG ++ DE + MK
Sbjct: 132 DIEELMKDGDKNNDGRIDYDEXLEFMK 158
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 9 SRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM 68
S KD +G+ +E+ + F +FD + G ID EL + ++A G +TE+ I ++
Sbjct: 84 SMKDDSKGKSE-------EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEEL 136
Query: 69 IADVDKDGSGAIDLDE 84
+ D DK+ G ID DE
Sbjct: 137 MKDGDKNNDGRIDYDE 152
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 60/77 (77%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS+++KQEIKEAF+LFDT+ +G+ID EL VAMRALGF++ + +I +++ + D++G+G I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 81 DLDEFEHMMTAKIGERD 97
D+F +MT KI RD
Sbjct: 61 GFDDFLDIMTEKIKNRD 77
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
+ K+E+ +AF + D + G I ++K R LG + EI E++ E DR+ +G + D
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 157 EFIRMM 162
+F+ +M
Sbjct: 64 DFLDIM 69
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 87/144 (60%), Gaps = 3/144 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS+++ +KE F++ DTD SGTI EL ++ +G E+ E +I ++ D D SG I
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
D EF T + + + +E L+ AF D+D +G I+ +I++ ++ G++ D I +
Sbjct: 64 DYGEF-IAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLD--DIHIDD 120
Query: 141 MVEEADRDHDGEVNADEFIRMMKR 164
M++E D+D+DG+++ EF MM++
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMRK 144
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFH 107
D EF MM K+ + DS+EE+ +AF
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++TEEQI + + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 61
Query: 116 KISAGD-IKRIARELGVNFTDREIHE 140
I + + +AR++ ++ EI E
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIRE 87
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 6 KGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQI 65
+ +SRKD+ L ++ +E++EAF FD D G I+ ++L MR +G+ TE ++
Sbjct: 10 RNLSRKDR------SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMEL 63
Query: 66 NQMIADVDKDGSGAIDLDEFEHMMTAKI----GERDSKEELMKAFHIIDQDNNGKISAGD 121
++ ++ + G +D D+F +M K+ + +EL AF D + +G+IS +
Sbjct: 64 IELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSE 123
Query: 122 IKRIARE-LGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
++ R+ LG R+I E++ + D + DG V+ +EF+RMM R
Sbjct: 124 LREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 5/149 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L ++ +E++EAF FD D G I+ ++L MR +G+ TE ++ ++ ++ + G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 81 DLDEFEHMMTAKI----GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARE-LGVNFTD 135
D D+F +M K+ + +EL AF D + +G+IS +++ R+ LG
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 136 REIHEMVEEADRDHDGEVNADEFIRMMKR 164
R+I E++ + D + DG V+ +EF+RMM R
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L ++ +E++EAF FD D G I+ ++L MR +G+ TE ++ ++ ++ + G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 81 DLDEFEHMMTAKI----GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARE-LGVNFTD 135
D D+F +M K+ + +EL AF D + +G+IS +++ R LG
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 136 REIHEMVEEADRDHDGEVNADEFIRMMKR 164
R+I E++ + D + DG V+ +EF+RMM R
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKIGERD 97
D EF MM K+ + D
Sbjct: 64 DFPEFLTMMARKMKDTD 80
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++TEEQI + + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 61
Query: 116 KI 117
I
Sbjct: 62 TI 63
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 21 LSQQKKQEIKEAFELFDT-DGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
LS + + ++ AF F+T +GSG + ++ + + LG + T+ I Q+I + D G+G
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 80 IDLDEFEHMMTAKIGERDSKE----ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD 135
ID D F+ + +GE + E EL +AF + D++ NG IS ++ I EL +
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSS 126
Query: 136 REIHEMVEEADRDHDGEVNADEFIRMM 162
++ M++E D D G V+ +EF+ +M
Sbjct: 127 EDLDAMIDEIDADGSGTVDFEEFMGVM 153
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
+Q +QE++EAF L+D +G+G I + + L ++ E ++ MI ++D DGSG +D
Sbjct: 86 PEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVD 145
Query: 82 LDEFEHMMTA 91
+EF +MT
Sbjct: 146 FEEFMGVMTG 155
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKI 93
D EF MM K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++TEEQI + + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 61
Query: 116 KI 117
I
Sbjct: 62 TI 63
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKI 93
D EF MM K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++TEEQI + + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 61
Query: 116 KI 117
I
Sbjct: 62 TI 63
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKI 93
D EF MM K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++TEEQI + + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 61
Query: 116 KI 117
I
Sbjct: 62 TI 63
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKI 93
D EF MM K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++TEEQI + + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 61
Query: 116 KI 117
I
Sbjct: 62 TI 63
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF L+D DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMM 89
D EF MM
Sbjct: 64 DFPEFLTMM 72
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG+N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAK 92
D EF MM K
Sbjct: 64 DFPEFLTMMARK 75
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++TEEQI + + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 61
Query: 116 KI 117
I
Sbjct: 62 TI 63
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 81 DLDEFEHMMTAK 92
D EF MM K
Sbjct: 65 DFPEFLTMMARK 76
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 161 MMKR 164
MM R
Sbjct: 72 MMAR 75
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++TEEQI + + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 62
Query: 116 KI 117
I
Sbjct: 63 TI 64
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 46/73 (63%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L++++ E KEAF LFD DG GTI KEL MR+LG TE ++ MI +VD DG G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 81 DLDEFEHMMTAKI 93
D EF MM K+
Sbjct: 64 DFPEFLTMMARKM 76
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D DG ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 161 MMKR 164
MM R
Sbjct: 71 MMAR 74
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 95 ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVN 154
E+DS+EEL++AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG +N
Sbjct: 3 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 62
Query: 155 ADEFIRMM 162
+EF+RMM
Sbjct: 63 YEEFVRMM 70
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 23 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDL 82
Q ++E+ EAF++FD DG+G I A EL M LG ++T++++++MI + D DG G I+
Sbjct: 4 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 63
Query: 83 DEFEHMMTAK 92
+EF MM +K
Sbjct: 64 EEFVRMMVSK 73
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 10 RKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI 69
+K +R LS+++ +KE F D D SG I +EL ++ +G + E +I +
Sbjct: 10 KKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLX 69
Query: 70 ADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAREL 129
D D SG ID EF T + + + ++ L AF D+D +G I+ ++++ E
Sbjct: 70 QAADVDNSGTIDYKEF-IAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEF 128
Query: 130 GVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
GV D I E+ + D+D+DG ++ +EF+ ++
Sbjct: 129 GVE--DVRIEELXRDVDQDNDGRIDYNEFVAXXQK 161
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI-ADVDKDGSGAIDLDEFEHM 88
K+ F LFD G G I L +RA+G+ T + + +I AD + ++ LD+ +
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 89 MTAKIGERDSK-----EELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVE 143
+ E D+ E+ +KAF + D+++ GK+S GD++ + LG TD E+ E+++
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 144 EADRDHDGEVNADEFIRMMKR 164
+ D +GE++ +FI + R
Sbjct: 127 GVEVDSNGEIDYKKFIEDVLR 147
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 40/64 (62%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
++ K ++ +AF++FD + +G + +L + LG ++T+ ++++++ V+ D +G ID
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEID 137
Query: 82 LDEF 85
+F
Sbjct: 138 YKKF 141
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L+ ++ E KEAF LFD DG G I KEL MR+LG TE ++ MI +VD DG+G I
Sbjct: 4 LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKI 93
D EF ++M K+
Sbjct: 64 DFPEFLNLMARKM 76
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+D +G I+ ++ + R LG N T+ E+ +M+ E D D +G ++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 161 MMKR 164
+M R
Sbjct: 71 LMAR 74
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 59 EMTEEQINQM---IADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNG 115
++T+EQI++ + DKDG G I E +M + +G+ ++ EL + +D D NG
Sbjct: 3 QLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNG 61
Query: 116 KI 117
I
Sbjct: 62 TI 63
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%)
Query: 92 KIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDG 151
K+ + DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 152 EVNADEFIRMM 162
+VN +EF++MM
Sbjct: 61 QVNYEEFVQMM 71
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 68 VQMMTAK 74
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHM 88
++ F D D SGT+ ++E+ ++ +G++ I+Q++ D+D + SG I +F
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDF--- 115
Query: 89 MTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIA--RELGVNFTDREIHEMVEE 144
+ A I ++ KE + F D D NGKIS ++KRI ++ D+ I +++E
Sbjct: 116 LAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQE 175
Query: 145 ADRDHDGEVNADEFIRMMKR 164
D + DGE++ EF+ MM +
Sbjct: 176 VDLNGDGEIDFHEFMLMMSK 195
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 25 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-----MTEEQINQMIADVDKDGSGA 79
KK+ F+ FD DG+G I +EL R G + + ++ I+ ++ +VD +G G
Sbjct: 127 KKEVCLIPFKFFDIDGNGKISVEELK---RIFGRDDIENPLIDKAIDSLLQEVDLNGDGE 183
Query: 80 IDLDEFEHMMTAK 92
ID EF MM+ K
Sbjct: 184 IDFHEFMLMMSKK 196
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 48/66 (72%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D++EEL +AF + D+D NG ISA +++ + LG TD E+ +M++EAD D DG+VN +
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 157 EFIRMM 162
EF++MM
Sbjct: 66 EFVKMM 71
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E+KEAF++FD D +G I A EL M LG ++T+E++ QMI + D DG G ++ +EF
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 86 EHMM 89
MM
Sbjct: 68 VKMM 71
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 48/66 (72%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D++EEL +AF + D+D NG ISA +++ + LG TD E+ +M++EAD D DG+VN +
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 157 EFIRMM 162
EF++MM
Sbjct: 61 EFVKMM 66
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E+KEAF++FD D +G I A EL M LG ++T+E++ QMI + D DG G ++ +EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 86 EHMM 89
MM
Sbjct: 63 VKMM 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
DS+EE+ +AF + D+D NG ISA D++ + LG TD E+ EM+ EAD D DG+VN +
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 157 EFIRMM 162
+F++MM
Sbjct: 64 DFVQMM 69
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
+ ++EI+EAF +FD DG+G I A +L M LG ++T+E++++MI + D DG G +
Sbjct: 1 MDTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 81 DLDEFEHMMTAK 92
+ ++F MMTAK
Sbjct: 61 NYEDFVQMMTAK 72
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+I+E F++FD D G + +EL A+R+LG T ++N + ++ + DL F+
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLN---AKEFDLATFKT 62
Query: 88 MMTAKI-GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEAD 146
+ I + +E++ AF +D++ NG I +++++ LG T E+ E+++E
Sbjct: 63 VYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 147 RDHDGEVNADEFIRMM 162
DG +N + F+ M+
Sbjct: 123 VSGDGAINYESFVDML 138
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLD 83
++ +E+ +AF D +G+GTI EL + LG +T ++ +++ +V G GAI+ +
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 84 EFEHMM 89
F M+
Sbjct: 133 SFVDML 138
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
S +++ + F I D+DN+GK+S ++ R LG N T+ E++ + G++NA E
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKE 54
Query: 158 FIRMMKRTTF 167
F +T +
Sbjct: 55 FDLATFKTVY 64
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG+VN +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 157 EFIRMM 162
EF++MM
Sbjct: 62 EFVQMM 67
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 25 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 85 FEHMMTA 91
F MMTA
Sbjct: 63 FVQMMTA 69
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG+VN +
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 157 EFIRMM 162
EF++MM
Sbjct: 65 EFVQMM 70
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 67 VQMMTAK 73
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG+VN +
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 157 EFIRMM 162
EF++MM
Sbjct: 63 EFVQMM 68
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 65 VQMMTAK 71
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG+VN +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 157 EFIRMM 162
EF++MM
Sbjct: 62 EFVQMM 67
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 25 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 85 FEHMM 89
F MM
Sbjct: 63 FVQMM 67
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
Q + QE KEAF + D + G ID ++L+ + ++G T+E + M+++ G I
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPI 56
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ F M K+ D ++ + AF D++ +G I ++ + +G FTD E+ E
Sbjct: 57 NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDE 116
Query: 141 MVEEADRDHDGEVNADEFIRMMK 163
M EA D G N EF R++K
Sbjct: 117 MYREAPIDKKGNFNYVEFTRILK 139
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
DS+EEL +AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG++N +
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 157 EFIRMM 162
EF+++M
Sbjct: 61 EFVKVM 66
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E+KEAF +FD D +G I A EL M LG ++T+E++++MI + D DG G I+ +EF
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 86 EHMMTAK 92
+M AK
Sbjct: 63 VKVMMAK 69
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
DS+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG+VN +
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 157 EFIRMM 162
EF++MM
Sbjct: 86 EFVQMM 91
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF + D DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 88 VQMMTAK 94
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 81 DLDEFEHMMTAKIGE 95
D +EF MM ++ E
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG N T E+ ++EE D D G ++ +EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 161 MMKR 164
MM R
Sbjct: 81 MMVR 84
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+E+++ +I +VD+DGSG I
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 81 DLDEFEHMMT 90
D +EF MM
Sbjct: 63 DFEEFLVMMV 72
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG N T E+ ++EE D D G ++ +EF+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 161 MMKR 164
MM R
Sbjct: 70 MMVR 73
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS+++ + KEAF LFD DG G I +EL +R+L TEE++ MI++VD DG+G I
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKI 93
+ DEF +M K+
Sbjct: 64 EFDEFLSLMAKKV 76
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 104 KAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMK 163
+AF + D+D +G I+ ++ + R L N T+ E+ +M+ E D D +G + DEF+ +M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 164 R 164
+
Sbjct: 74 K 74
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 60 MTEEQI---NQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGK 116
++EEQI + DKDG G I ++E ++ + + + ++EEL +D D NG
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRS-LDQNPTEEELQDMISEVDADGNGT 62
Query: 117 I 117
I
Sbjct: 63 I 63
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS+++ + KEAF LFD DG G I +EL +R+L TEE++ MI++VD DG+G I
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 81 DLDEFEHMMTAKI 93
+ DEF +M K+
Sbjct: 64 EFDEFLSLMAKKV 76
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 104 KAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMK 163
+AF + D+D +G I+ ++ + R L N T+ E+ +M+ E D D +G + DEF+ +M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 164 R 164
+
Sbjct: 74 K 74
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 60 MTEEQI---NQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGK 116
++EEQI + DKDG G I ++E ++ + + + ++EEL +D D NG
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRS-LDQNPTEEELQDMISEVDADGNGT 62
Query: 117 I 117
I
Sbjct: 63 I 63
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I KEL MR LG T+ +++ +I +VD+DGSG I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 81 DLDEFEHMMTAKIGE 95
D +EF MM ++ E
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS ++ + R LG N T E+ ++ E D D G ++ +EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLV 80
Query: 161 MMKR 164
MM R
Sbjct: 81 MMVR 84
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++EI+EAF +FD DG+G I A EL M LG ++T+E++++MI + D DG G ++ +EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 86 EHMMTAK 92
MMTAK
Sbjct: 61 VQMMTAK 67
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 99 KEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEF 158
+EE+ +AF + D+D NG ISA +++ + LG TD E+ EM+ EAD D DG+VN +EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 159 IRMM 162
++MM
Sbjct: 61 VQMM 64
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
Q++K AF D +G G I +L + G M + ++ +D DGSG ID EF
Sbjct: 55 QKLKAAFLHLDEEGKGNITKLQLRKGLERSGL-MLPPNFDLLLDQIDSDGSGNIDYTEF- 112
Query: 87 HMMTAKIGERD-SKEELMKAFHIIDQDNNGKISAGDIKRI---ARELGVNFTDREIHE-- 140
+ A I R SK+ + AF + D DN+G+I+ ++ + + G N T+R++++
Sbjct: 113 --LAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRG-NITERDVNQVK 169
Query: 141 -MVEEADRDHDGEVNADEFIRMMKRT 165
M+ E D++ DG+++ EF MMK T
Sbjct: 170 KMIREVDKNGDGKIDFYEFSEMMKLT 195
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 23 QQKKQEIKEAFELFDTDGSGTIDAKEL-----NVAMRALGFEMTEEQINQMIADVDKDGS 77
Q K+ I AF +FD D G I EL N R E Q+ +MI +VDK+G
Sbjct: 121 QLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGD 180
Query: 78 GAIDLDEFEHMM 89
G ID EF MM
Sbjct: 181 GKIDFYEFSEMM 192
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKD--GSG 78
S+++ E KEAF+LFD G G I + MRALG T ++ +++ + D
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 79 AIDLDEFEHMM--TAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
+ ++F MM AK ++ E+ ++ + D++ NG + +I+ + LG T+
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 120
Query: 137 EIHEMVEEADRDHDGEVNADEFIRMM 162
E+ ++V D +G +N +E +RM+
Sbjct: 121 EVEQLV-AGHEDSNGCINYEELVRMV 145
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKD--GSG 78
S+++ E KEAF+LFD G G I + MRALG T ++ +++ + D
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 79 AIDLDEFEHMM--TAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
+ ++F MM AK ++ E+ ++ + D++ NG + +I+ + LG T+
Sbjct: 63 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 122
Query: 137 EIHEMVEEADRDHDGEVNADEFIRMM 162
E+ ++V D +G +N +E +RM+
Sbjct: 123 EVEQLV-AGHEDSNGCINYEELVRMV 147
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS++ E K AF++FD DG G I K L MR LG T+E+++ +I +VD+DGSG I
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 81 DLDEFEHMMTAKIGE 95
D +EF MM ++ E
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E AF + D D G IS + + R LG N T E+ ++EE D D G ++ +EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 161 MMKR 164
MM R
Sbjct: 81 MMVR 84
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKD--GSGAIDLDE 84
+E KEAFELFD G G I + MRALG T ++ +++ + D S +D +
Sbjct: 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 69
Query: 85 FEHMMTAKIGER--DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMV 142
F M+ A R + E+ ++ F + D++ NGK+ +++ + LG T+ E+ E V
Sbjct: 70 FLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV-ETV 128
Query: 143 EEADRDHDGEVNADEFIR 160
D +G +N + F++
Sbjct: 129 LAGHEDSNGCINYEAFLK 146
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
E KEAFELFD++ +G I + L ++ G + N+M + D G+G I EF
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLS 66
Query: 88 MMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
MM ++ + S++ L +AF D + G I ++ LG E E + +
Sbjct: 67 MMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITET 126
Query: 148 DHDGEVNADEFIRMM 162
+ G++ D FI M
Sbjct: 127 EK-GQIRYDNFINTM 140
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D E +AF + D + G I+ ++ + ++ GV +EM EAD +G++
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 157 EFIRMMKR 164
EF+ MM R
Sbjct: 63 EFLSMMGR 70
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRAL-----------GFEMTEEQINQMIADVDKD 75
+E+ + F D +G G +D KEL R L E +++ ++ VD D
Sbjct: 314 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 373
Query: 76 GSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD 135
+G I+ EF + K S+E L+ AF D D +GKI+ ++ R+ GV D
Sbjct: 374 RNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGRL---FGVTEVD 429
Query: 136 REI-HEMVEEADRDHDGEVNADEFIRMMKRTT 166
E H++++E D+++DGEV+ +EF+ MM++
Sbjct: 430 DETWHQVLQECDKNNDGEVDFEEFVEMMQKIC 461
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 16/155 (10%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL-----------GFEMTEEQINQMIADV 72
++ +E+ + F D +G G +D KEL R L E +++ ++ V
Sbjct: 37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 96
Query: 73 DKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN 132
D D +G I+ EF + K S+E L+ AF D D +GKI+ ++ R+ GV
Sbjct: 97 DFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGRL---FGVT 152
Query: 133 FTDREI-HEMVEEADRDHDGEVNADEFIRMMKRTT 166
D E H++++E D+++DGEV+ +EF+ MM++
Sbjct: 153 EVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKIC 187
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 2 ASLYKGVSRKDKIRG--RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE 59
A +Y+G+ + R + + + +EI+EAF++FD DG+G I +EL AMR+LG+
Sbjct: 9 ALMYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYM 68
Query: 60 MTEEQINQMIADVDKDGSGAIDLDEFEHMM 89
E ++ +I +D DG G +D +EF ++
Sbjct: 69 PNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D EE+ +AF + D+D NG IS ++ R LG + E+ +++ D D DG+V+ +
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 157 EFIRMM 162
EF+ ++
Sbjct: 93 EFVTLL 98
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 21/154 (13%)
Query: 27 QEIKEAFELFDTDGSGTIDAKEL----NVAMRALGFE----------MTEEQINQMIADV 72
+++ E F DT+ G +D EL + MR G + E+QI+ ++ +
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLL 390
Query: 73 DKDGSGAIDLDEFEHMMTAKIGERD---SKEELMKAFHIIDQDNNGKISAGDIKRIAREL 129
D DGSG+I+ EF A +R S+E + +AF + D+D +GKIS ++ ++ +
Sbjct: 391 DMDGSGSIEYSEF----IASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA 446
Query: 130 GVNFTDREIHEMVEEADRDHDGEVNADEFIRMMK 163
+ E+ ++E+ D + DGEV+ +EF+ M++
Sbjct: 447 DSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ ++ AF++FD DGSG I KEL + E++ +I VD + G +D +EF
Sbjct: 416 RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEF 475
Query: 86 EHMM 89
M+
Sbjct: 476 VEML 479
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
+Q + QE KEAF+L D D G I ++ +LG TE++++ M+A+ G I
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPI 106
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ F + +I D ++ ++ AF++ D+ +GK +KR G F+ E+ +
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDE-GDGKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 141 MVEEADRDHDGEVNADEFIRMMKR 164
+ EA D +G ++ +F +++ +
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQILTK 189
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 20/155 (12%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKEL----NVAMRALGFEMT-------EEQINQMIA 70
SQ + +E+ F D +G G +D EL MR G + + E +++Q++
Sbjct: 353 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 412
Query: 71 DVDKDGSGAIDLDEFEHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARE 128
VD D +G I+ EF +T + + S+E L +AF + D DN+GKIS+ ++ I
Sbjct: 413 AVDFDKNGYIEYSEF---VTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI--- 466
Query: 129 LGVNFTDREIHEMV-EEADRDHDGEVNADEFIRMM 162
GV+ D E + V E D+++DGEV+ DEF +M+
Sbjct: 467 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ ++ AF +FD+D SG I + EL ++ E ++++VDK+ G +D DEF
Sbjct: 440 RERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 497
Query: 86 EHMMTAKIG 94
+ M+ G
Sbjct: 498 QQMLLKLCG 506
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 89 MTAKIGERDSKEELMKAFHIIDQDNNGKISAGDI----KRIARELG-------VNFTDRE 137
M +K+ +D +EL FH +D++ +G++ ++ K + R G + + E
Sbjct: 347 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 406
Query: 138 IHEMVEEADRDHDGEVNADEFIRM-MKRTTF 167
+ ++++ D D +G + EF+ + M R T
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 437
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 20/155 (12%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKEL----NVAMRALGFEMT-------EEQINQMIA 70
SQ + +E+ F D +G G +D EL MR G + + E +++Q++
Sbjct: 354 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 413
Query: 71 DVDKDGSGAIDLDEFEHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARE 128
VD D +G I+ EF +T + + S+E L +AF + D DN+GKIS+ ++ I
Sbjct: 414 AVDFDKNGYIEYSEF---VTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI--- 467
Query: 129 LGVNFTDREIHEMV-EEADRDHDGEVNADEFIRMM 162
GV+ D E + V E D+++DGEV+ DEF +M+
Sbjct: 468 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ ++ AF +FD+D SG I + EL ++ E ++++VDK+ G +D DEF
Sbjct: 441 RERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 498
Query: 86 EHMMTAKIG 94
+ M+ G
Sbjct: 499 QQMLLKLCG 507
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 89 MTAKIGERDSKEELMKAFHIIDQDNNGKISAGDI----KRIARELG-------VNFTDRE 137
M +K+ +D +EL FH +D++ +G++ ++ K + R G + + E
Sbjct: 348 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 407
Query: 138 IHEMVEEADRDHDGEVNADEFIRM-MKRTTF 167
+ ++++ D D +G + EF+ + M R T
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 438
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 20/155 (12%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKEL----NVAMRALGFEMT-------EEQINQMIA 70
SQ + +E+ F D +G G +D EL MR G + + E +++Q++
Sbjct: 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 389
Query: 71 DVDKDGSGAIDLDEFEHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARE 128
VD D +G I+ EF +T + + S+E L +AF + D DN+GKIS+ ++ I
Sbjct: 390 AVDFDKNGYIEYSEF---VTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI--- 443
Query: 129 LGVNFTDREIHEMV-EEADRDHDGEVNADEFIRMM 162
GV+ D E + V E D+++DGEV+ DEF +M+
Sbjct: 444 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ ++ AF +FD+D SG I + EL ++ E ++++VDK+ G +D DEF
Sbjct: 417 RERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Query: 86 EHMMTAKIG 94
+ M+ G
Sbjct: 475 QQMLLKLCG 483
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 89 MTAKIGERDSKEELMKAFHIIDQDNNGKISAGDI----KRIARELG-------VNFTDRE 137
M +K+ +D +EL FH +D++ +G++ ++ K + R G + + E
Sbjct: 324 MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHE 383
Query: 138 IHEMVEEADRDHDGEVNADEFIRM-MKRTTF 167
+ ++++ D D +G + EF+ + M R T
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 414
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L+ +++QE KEAF+LFD D + A+EL MRALG T+++I++++ D DKD SG
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 81 DLDEFEHMMTAKIGERDS 98
D + F +M E DS
Sbjct: 68 DQETFLTIMLEYGQEVDS 85
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 47/71 (66%)
Query: 92 KIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDG 151
K+ + ++E +AF + D+DN+ K++A ++ + R LG N T ++I E+V++ D+D+ G
Sbjct: 6 KVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSG 65
Query: 152 EVNADEFIRMM 162
+ + + F+ +M
Sbjct: 66 KFDQETFLTIM 76
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F D G I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMT 90
+D DEF MM
Sbjct: 72 VDFDEFLVMMV 82
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHIIDQD-NNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I QD +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R
Sbjct: 77 FLVMMVRC 84
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 64 QINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIK 123
++ MI +VD DG+G ID EF MM K+ + DS+EE+ +AF + D+D NG ISA +++
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 124 RIARELG 130
+ LG
Sbjct: 62 HVMTNLG 68
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 EIKEAFELFDTDGSGTIDAKE-LNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
E+++ D DG+GTID E L + R + +EE+I + DKDG+G I E
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 87 HMMT 90
H+MT
Sbjct: 62 HVMT 65
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 25 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALG 57
++EI+EAF +FD DG+G I A EL M LG
Sbjct: 36 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 137 EIHEMVEEADRDHDGEVNADEFIRMMKR 164
E+ +M+ E D D +G ++ EF+ MM R
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMAR 29
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 48/74 (64%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++ E KEAF LFD D +G+I + EL MR+LG +E ++N ++ ++D DG+
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 80 IDLDEFEHMMTAKI 93
I+ EF +M+ ++
Sbjct: 63 IEFSEFLALMSRQL 76
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
E +AF + D+DNNG IS+ ++ + R LG++ ++ E+++++ E D D + ++ EF+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 161 MMKR 164
+M R
Sbjct: 71 LMSR 74
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 17 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDG 76
R LSQ++ QE+KEAF + D D G I ++L +LG ++++N M+ K+
Sbjct: 6 RRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML----KEC 61
Query: 77 SGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
G ++ F + K+ D ++ L AF + D+D G I +K + +G NF+
Sbjct: 62 PGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKE 121
Query: 137 EIHEMVEEA 145
EI + ++A
Sbjct: 122 EIKNVWKDA 130
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L+ ++K E K AF++F D G I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMT 90
+D DEF MM
Sbjct: 72 VDFDEFLVMMV 82
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHIIDQD-NNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I QD +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R
Sbjct: 77 FLVMMVRC 84
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+++K F + D DG G I ++L + G ++ + ++ +D DGSG ID EF
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEF- 109
Query: 87 HMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV--NFTDREIH---EM 141
+ A ++ SK+ + AF + D DN+G+I+ ++ I N T R+++ M
Sbjct: 110 -IAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRM 168
Query: 142 VEEADRDHDGEVNADEFIRMMK 163
+ + D+++DG+++ EF MMK
Sbjct: 169 IRDVDKNNDGKIDFHEFSEMMK 190
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 17/78 (21%)
Query: 23 QQKKQEIKEAFELFDTDGSGTIDAKEL-----------NVAMRALGFEMTEEQINQMIAD 71
Q K+ I AF +FD D G I EL N+ R + ++ +MI D
Sbjct: 118 QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVN------RVKRMIRD 171
Query: 72 VDKDGSGAIDLDEFEHMM 89
VDK+ G ID EF MM
Sbjct: 172 VDKNNDGKIDFHEFSEMM 189
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 21 LSQQKKQEIKEAFELFDTDGS--GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
L++++K E K AF++F G+ G I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIF-VQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 79 AIDLDEFEHMMT 90
+D DEF MM
Sbjct: 71 TVDFDEFLVMMV 82
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHIIDQD-NNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I Q +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R
Sbjct: 77 FLVMMVRC 84
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMT 90
+D DEF MM
Sbjct: 72 VDFDEFLVMMV 82
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKD--GSG 78
S+ + KEAF LFD G I A ++ RALG T +IN+++ + K+ +
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61
Query: 79 AIDLDEFEHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
AI +EF M+ A +D + E+ ++ + D++ NG + +++ + LG T+
Sbjct: 62 AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 121
Query: 137 EIHEMVEEADRDHDGEVNADEFIR 160
E+ E++ + D +G +N + F++
Sbjct: 122 EVEELM-KGQEDSNGCINYEAFVK 144
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMT 90
+D DEF MM
Sbjct: 72 VDFDEFLVMMV 82
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G+I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMT 90
+D DEF MM
Sbjct: 72 VDFDEFLVMMV 82
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R+
Sbjct: 77 FLVMMVRS 84
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMT 90
+D DEF MM
Sbjct: 72 VDFDEFLVMMV 82
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ MM R
Sbjct: 77 FLVMMVRC 84
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKD--GSGA 79
S+ + KEAF LFD G I A ++ RALG T +IN+++ + K+ + A
Sbjct: 1 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAA 60
Query: 80 IDLDEFEHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
I +EF M+ A +D + E+ ++ + D++ NG + +++ + LG T+ E
Sbjct: 61 ITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE 120
Query: 138 IHEMVEEADRDHDGEVNADEFIR 160
+ E++ + D +G +N + F++
Sbjct: 121 VEELM-KGQEDSNGCINYEAFVK 142
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMM 89
K+AF LFD G+G I + +RA G T +I ++ + + + +D+++F ++
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDMEQFLQVL 63
Query: 90 TAKIG--ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
G EE +K F + D+D G I G+++ + LG ++ E+ E+++
Sbjct: 64 NRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV 123
Query: 148 DHDGEVNADEFIRMM 162
DG VN +F++M+
Sbjct: 124 -KDGMVNYHDFVQMI 137
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 13 KIRGRHHGLSQQ-KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIAD 71
++ R +G +E + F++FD D +G I EL + +LG +++ E++++++
Sbjct: 61 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKG 120
Query: 72 VD-KDGSGAIDLDEFEHMMTA 91
V KD G ++ +F M+ A
Sbjct: 121 VPVKD--GMVNYHDFVQMILA 139
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 87/153 (56%), Gaps = 15/153 (9%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKEL----NVAMRALGFEM-----TEEQINQMIADVDK 74
++++E+ + F+ D +G G +D KEL NV +R E+ EE+++ ++ +VD
Sbjct: 352 EERKELTDIFKKLDKNGDGQLDKKELIEGYNV-LRNFKNELGELKNVEEEVDNILKEVDF 410
Query: 75 DGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV-NF 133
D +G I+ EF + K S+E L +AF++ D D +GKI+ + +A G+ +
Sbjct: 411 DKNGYIEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITK---EELANLFGLTSI 466
Query: 134 TDREIHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+++ ++++ EAD++ D ++ DEF+ MM +
Sbjct: 467 SEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG--------FEMTEEQINQMIADVD 73
SQ++ +E+ + F D +G G +D +EL L E +++ ++ D
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 400
Query: 74 KDGSGAIDLDEFEHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
D +G ID EF +T + + SK++L AF DQD NGKIS + +A G+
Sbjct: 401 FDRNGYIDYSEF---VTVAMDRKSLLSKDKLESAFQKFDQDGNGKIS---VDELASVFGL 454
Query: 132 N-FTDREIHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ + EM+ D ++DG+V+ +EF +M+++
Sbjct: 455 DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 490
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 17/156 (10%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG------FEMT--EEQINQMIADVD 73
SQ++ +E+ + F D +G G +D +EL L F++ E +++ ++ D
Sbjct: 58 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 117
Query: 74 KDGSGAIDLDEFEHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
D +G ID EF +T + + SK++L AF DQD NGKIS + +A G+
Sbjct: 118 FDRNGYIDYSEF---VTVAMDRKSLLSKDKLESAFQKFDQDGNGKIS---VDELASVFGL 171
Query: 132 N-FTDREIHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ + EM+ D ++DG+V+ +EF +M+++
Sbjct: 172 DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 207
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++E+KEAF + D + G I L +++LG E+TE++I MIA+ D DGSG +D +EF
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 86 EHMMTA 91
+ +M +
Sbjct: 66 KCLMMS 71
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
EL +AF ++D++ G I ++ I + LG T+ EI M+ E D D G V+ +EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 161 MM 162
+M
Sbjct: 68 LM 69
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMMT 90
+D DE+ MM
Sbjct: 72 VDFDEWLVMMV 82
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
++ MM R
Sbjct: 77 WLVMMVRC 84
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G I KEL MR LG T E++ +MI +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 80 IDLDEFEHMM 89
+D DE+ MM
Sbjct: 72 VDFDEWLVMM 81
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ EM++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
++ MM R
Sbjct: 77 WLVMMARC 84
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
QE+ E F DTDGSG I ELN A+ + G + +++ DK+ SG I DEF+
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 87 HMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEAD 146
+ + R+ F D +G++ + +++ G +++ ++ + D
Sbjct: 87 DLHHFILSMRE-------GFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFD 139
Query: 147 RDHDGEVNADEFIRM 161
R G + D+++ +
Sbjct: 140 RQRRGSLGFDDYVEL 154
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMR-----------ALGFEMTEEQINQMIA 70
SQ + +E+ F D +G G +D EL + L E +++Q++
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 71 DVDKDGSGAIDLDEFEHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARE 128
VD D +G I+ EF +T + S+E L +AF D DN+GKIS+ ++ I
Sbjct: 390 AVDFDKNGYIEYSEF---VTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI--- 443
Query: 129 LGVNFTDREIHEMV-EEADRDHDGEVNADEF 158
GV+ D E + V E D+++DGEV+ DEF
Sbjct: 444 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ ++ AF FD+D SG I + EL ++ E ++++VDK+ G +D DEF
Sbjct: 417 RERLERAFRXFDSDNSGKISSTELATIFGVS--DVDSETWKSVLSEVDKNNDGEVDFDEF 474
Query: 86 EHMMTAKIG 94
+ + G
Sbjct: 475 QQXLLKLCG 483
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 91 AKIGERDSKEELMKAFHIIDQDNNGKISAGDI----KRIARELG-------VNFTDREIH 139
+K+ +D +EL FH D++ +G++ ++ K + R G + + E+
Sbjct: 326 SKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVD 385
Query: 140 EMVEEADRDHDGEVNADEFIRM 161
++++ D D +G + EF+ +
Sbjct: 386 QVLDAVDFDKNGYIEYSEFVTV 407
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 21 LSQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
LSQ + ++KE FELFD DG G +DA ++ R LG E + + K G
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFA-VGGTHKMGEK 61
Query: 79 AIDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFT 134
++ +EF E +M E+ + + M+AF D++ G IS +++ + LG +
Sbjct: 62 SLPFEEFLPAYEGLMDC---EQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLS 118
Query: 135 DREIHEMVEEAD--RDHDGEVNADEFIR 160
D E+ E++ D D +G V +EF++
Sbjct: 119 DEEVDEIINLTDLQEDLEGNVKYEEFVK 146
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 21 LSQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
LSQ + ++KE FELFD DG G +DA ++ R LG E + + K G
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFA-VGGTHKMGEK 62
Query: 79 AIDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFT 134
++ +EF E +M E+ + + M+AF D++ G IS +++ + LG +
Sbjct: 63 SLPFEEFLPAYEGLMDC---EQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLS 119
Query: 135 DREIHEMVEEAD--RDHDGEVNADEFIR 160
D E+ E++ D D +G V +EF++
Sbjct: 120 DEEVDEIINLTDLQEDLEGNVKYEEFVK 147
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 21 LSQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
L++ + +E++E F+LFD DG G +DA ++ +R LG TE Q++Q K G
Sbjct: 3 LTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQH-GGTKKMGEK 61
Query: 79 AIDLDE----FEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFT 134
A L+E +E M + G + +E M+AF D++ G IS+ +I+ + + LG T
Sbjct: 62 AYKLEEILPIYEEMSSKDTGT--AADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERIT 119
Query: 135 DREIHEMVEEAD--RDHDGEVNADEFIRMMKRTTF 167
+ + +++ D D DG + ++ ++ + F
Sbjct: 120 EDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGPF 154
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 21 LSQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
LSQ + ++K+ FELFD DG G +DA +L R LG E + + K G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEK 61
Query: 79 AIDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFT 134
++ +EF E +M E+ + + M+AF D++ G IS +++ + LG +
Sbjct: 62 SLPFEEFLPAYEGLMDC---EQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLS 118
Query: 135 DREIHEMVEEAD--RDHDGEVNADEFIR 160
D E+ E++ D D +G V +EF++
Sbjct: 119 DEEVDEIINLTDLQEDLEGNVKYEEFVK 146
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 16 GRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKD 75
G L Q++ QE+KEAF + D + G ID +L +LG ++++ M+ K+
Sbjct: 8 GVLTKLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAML----KE 63
Query: 76 GSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD 135
G ++ F + + K+ DS+E + AF + D+ + K++ IK + +G NF
Sbjct: 64 APGPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNK 123
Query: 136 REIHEMVEEADRDHDGEVNADEFIRMMK 163
E+ +EA + G+ + F+ M+K
Sbjct: 124 DEMRMTFKEAPVEG-GKFDYVRFVAMIK 150
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALG-FEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ KEAF + D + G ID +L A+G + E+++ MI K+ SG I+ F
Sbjct: 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGPINFTVF 80
Query: 86 EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEA 145
M K+ D ++ +M AF ++D D G I ++ + G FT EI M
Sbjct: 81 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 140
Query: 146 DRDHDGEVN 154
D G V+
Sbjct: 141 PPDVAGNVD 149
Score = 33.5 bits (75), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMT 90
AF++ D DG G+I L + G T E+I M A D +G +D +++T
Sbjct: 100 AFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 158
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALG-FEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ KEAF + D + G ID +L A+G + E+++ MI K+ SG I+ F
Sbjct: 7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGPINFTVF 62
Query: 86 EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEA 145
M K+ D ++ +M AF ++D D G I ++ + G FT EI M
Sbjct: 63 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 122
Query: 146 DRDHDGEVN 154
D G V+
Sbjct: 123 PPDVAGNVD 131
Score = 33.1 bits (74), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHM 88
I AF++ D DG G+I L + G T E+I M A D +G +D ++
Sbjct: 79 IMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYV 138
Query: 89 MT 90
+T
Sbjct: 139 IT 140
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA--IDLDEF 85
+ KEAF LFD G I ++ +RALG T +IN+++ + K+ A I +EF
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEF 64
Query: 86 EHMMTAKIGERD--SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVE 143
M+ A +D + E+ ++ + D++ NG + +++ + LG T+ E+ E++
Sbjct: 65 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM- 123
Query: 144 EADRDHDGEVNADEFIR 160
+ D +G +N + F++
Sbjct: 124 KGQEDSNGCINYEAFVK 140
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 31 EAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF-EHMM 89
E +FD +G+GT+ EL + LG +MTEE++ +++ +D +G I+ + F +H+M
Sbjct: 85 EGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM 143
Query: 90 TA 91
+
Sbjct: 144 SV 145
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG-FEMTEEQINQMIADVDKDGSGA 79
Q + Q+ KEAF + D + G ID +L A+G + E+++ MI K+ SG
Sbjct: 6 FDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGP 61
Query: 80 IDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIH 139
I+ F M K+ D ++ +M AF ++D D G I ++ + FT EI
Sbjct: 62 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIK 121
Query: 140 EMVEEADRDHDGEVN 154
M D G V+
Sbjct: 122 NMWAAFPPDVAGNVD 136
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMT 90
AF++ D DG G+I L + T E+I M A D +G +D +++T
Sbjct: 87 AFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 145
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADV-DKDGSGAIDLDEFEHMMTA 91
F+ D D SG++ +E E+ + + Q + D+ D DG+G +D EF ++
Sbjct: 27 FKKLDLDNSGSLSVEEFMSLP-----ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQ 81
Query: 92 KIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAREL-GVNFTDREIHEMVEE----AD 146
+ D +++L AF I D D +G IS G++ ++ + + G N D ++ ++V++ AD
Sbjct: 82 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 141
Query: 147 RDHDGEVNADEFIRMM 162
+D DG ++ +EF ++
Sbjct: 142 KDGDGRISFEEFCAVV 157
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADV-DKDGSGAIDLDEFEHMMTA 91
F+ D D SG++ +E E+ + + Q + D+ D DG+G +D EF ++
Sbjct: 26 FKKLDLDNSGSLSVEEFMSLP-----ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQ 80
Query: 92 KIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAREL-GVNFTDREIHEMVEE----AD 146
+ D +++L AF I D D +G IS G++ ++ + + G N D ++ ++V++ AD
Sbjct: 81 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 140
Query: 147 RDHDGEVNADEFIRMM 162
+D DG ++ +EF ++
Sbjct: 141 KDGDGRISFEEFCAVV 156
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L Q+ QE+KEAF + D + G ID +L +LG ++++ M+ K+ G +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAML----KEAPGPL 72
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ F + + K+ DS+E + AF + D+ + K++ IK + +G NF E+
Sbjct: 73 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRM 132
Query: 141 MVEEADRDHDGEVNADEFIRMMK 163
+EA + G+ + F+ M+K
Sbjct: 133 TFKEAPVEG-GKFDYVRFVAMIK 154
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L Q+ QE+KEAF + D + G ID +L +LG ++++ M+ K+ G +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAML----KEAPGPL 72
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ F + + K+ DS+E + AF + D+ + K++ IK + +G NF E+
Sbjct: 73 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRM 132
Query: 141 MVEEADRDHDGEVNADEFIRMMK 163
+EA + G+ + F+ M+K
Sbjct: 133 TFKEAPVEG-GKFDYVRFVAMIK 154
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADV-DKDGSGAIDLDEFEHMMTA 91
F+ D D SG++ +E E+ + + Q + D+ D DG+G +D EF ++
Sbjct: 13 FKKLDLDNSGSLSVEEFMSLP-----ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQ 67
Query: 92 KIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAREL-GVNFTDREIHEMVEE----AD 146
+ D +++L AF I D D +G IS G++ ++ + + G N D ++ ++V++ AD
Sbjct: 68 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 127
Query: 147 RDHDGEVNADEFIRMM 162
+D DG ++ +EF ++
Sbjct: 128 KDGDGRISFEEFCAVV 143
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADV-DKDGSGAIDLDEFEHMMTA 91
F+ D D SG++ +E E+ + + Q + D+ D DG+G +D EF ++
Sbjct: 12 FKKLDLDNSGSLSVEEFMSLP-----ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQ 66
Query: 92 KIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAREL-GVNFTDREIHEMVEE----AD 146
+ D +++L AF I D D +G IS G++ ++ + + G N D ++ ++V++ AD
Sbjct: 67 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 126
Query: 147 RDHDGEVNADEFIRMM 162
+D DG ++ +EF ++
Sbjct: 127 KDGDGRISFEEFCAVV 142
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 21 LSQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
LSQ + ++K+ FELFD DG G +DA +L R LG E + + K G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEK 61
Query: 79 AIDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFT 134
++ +EF E +M E+ + + M+AF D++ G IS +++ + LG +
Sbjct: 62 SLPFEEFLPAYEGLMDC---EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 135 DREIHEMVEEAD--RDHDGEVNADEFIR 160
D ++ E+++ D D +G V ++F++
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 21 LSQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
LSQ + ++K+ FELFD DG G +DA +L R LG E + + K G
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEK 59
Query: 79 AIDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFT 134
++ +EF E +M E+ + + M+AF D++ G IS +++ + LG +
Sbjct: 60 SLPFEEFLPAYEGLMDC---EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 116
Query: 135 DREIHEMVEEAD--RDHDGEVNADEFIR 160
D ++ E+++ D D +G V ++F++
Sbjct: 117 DEDVDEIIKLTDLQEDLEGNVKYEDFVK 144
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 21 LSQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
LSQ + ++K+ FELFD DG G +DA +L R LG E + + K G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEK 61
Query: 79 AIDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFT 134
++ +EF E +M E+ + + M+AF D++ G IS +++ + LG +
Sbjct: 62 SLPFEEFLPAYEGLMDC---EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 135 DREIHEMVEEAD--RDHDGEVNADEFIR 160
D ++ E+++ D D +G V ++F++
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
QE+KEAF + D + G ID +L +LG ++++ M+ K+ G ++ F
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAML----KEAPGPLNFTMFL 57
Query: 87 HMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEAD 146
+ + K+ DS+E + AF + D+D K++ IK + +G NF E+ +EA
Sbjct: 58 SIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 117
Query: 147 RDHDGEVNADEFIRMMK 163
+ G+ + F+ M+K
Sbjct: 118 VEG-GKFDYVRFVAMIK 133
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 96 RDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNA 155
R E+L AF DQD +G I+ +++R LG E+ M+ EAD D DG VN
Sbjct: 2 RAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNY 61
Query: 156 DEFIRMMKR 164
+EF RM+ +
Sbjct: 62 EEFARMLAQ 70
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
++++ AF FD DG G I EL AM LG + +E+++ MI + D D G ++ +EF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 87 HMMT 90
M+
Sbjct: 66 RMLA 69
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMR-ALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+E+++AF FDT+G G I EL AMR LG ++ I ++I DVD +G G +D +EF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 86 EHMMT 90
MM+
Sbjct: 67 VRMMS 71
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 101 ELMKAFHIIDQDNNGKISAGDIKRIAREL-GVNFTDREIHEMVEEADRDHDGEVNADEFI 159
EL AF D + +G+IS +++ R+L G R+I E++ + D + DG V+ +EF+
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
Query: 160 RMMKR 164
RMM R
Sbjct: 68 RMMSR 72
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
G+SQ++ E + +F FD +G +D ++ + ++G+ M E + ++++ VD + G
Sbjct: 718 GISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGV 777
Query: 80 IDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIH 139
+ F M+ + + D+ +++M +F I+ D N I+ +++ REL + + I
Sbjct: 778 VTFQAFIDFMSRETADTDTADQVMASFKILAGDKN-YITVDELR---RELPPDQAEYCIA 833
Query: 140 EMVEEADRD 148
M RD
Sbjct: 834 RMAPYNGRD 842
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L Q++ QE+KEAF + D D G + +++ LG ++++ M+ K+ G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPL 56
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ F + + K+ DS+E + AF + D+ K++ IK + +G NF E+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 141 MVEEADRDHDGEVNADEFIRMMK 163
+EA + G+ + +F M+K
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMIK 138
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGS-GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
L++++K E K AF++F G I KEL R LG T E++ + I +VD+DGSG
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGT 71
Query: 80 IDLDEF 85
+D DEF
Sbjct: 72 VDFDEF 77
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 99 KEELMKAFHI-IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
K E AF I + +G IS ++ ++ R LG N T E+ E ++E D D G V+ DE
Sbjct: 17 KNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDE 76
Query: 158 FIRMMKRT 165
F+ R
Sbjct: 77 FLVXXVRC 84
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 16 GRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKD 75
G L Q++ QE+KEAF + D D G + +++ LG ++++ M+ K+
Sbjct: 7 GVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KE 62
Query: 76 GSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD 135
G ++ F + + K+ DS+E + AF + D+ K++ IK + +G NF
Sbjct: 63 APGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNK 122
Query: 136 REIHEMVEEADRDHDGEVNADEFIRMMK 163
E+ +EA + G+ + +F M+K
Sbjct: 123 DEMRMTFKEAPVEG-GKFDYVKFTAMIK 149
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L Q++ QE+KEAF + D D G + +++ LG ++++ M+ K+ G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPL 56
Query: 81 DLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE 140
+ F + + K+ DS+E + AF + D+ K++ IK + +G NF E+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 141 MVEEADRDHDGEVNADEFIRMMK 163
+EA + G+ + +F M+K
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMIK 138
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 22 SQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
SQ + ++K+ FELFD DG G +DA +L R LG E + + K G +
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEKS 59
Query: 80 IDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD 135
+ +EF E +M E+ + + M+AF D++ G IS +++ + LG +D
Sbjct: 60 LPFEEFLPAYEGLMDC---EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 116
Query: 136 REIHEMVEEAD--RDHDGEVNADEFIR 160
++ E+++ D D +G V ++F++
Sbjct: 117 EDVDEIIKLTDLQEDLEGNVKYEDFVK 143
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 22 SQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGA 79
SQ + ++K+ FELFD DG G +DA +L R LG E + + K G +
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEKS 59
Query: 80 IDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD 135
+ +EF E +M E+ + + M+AF D++ G IS +++ + LG +D
Sbjct: 60 LPFEEFLPAYEGLMDC---EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 116
Query: 136 REIHEMVEEAD--RDHDGEVNADEFIR 160
++ E+++ D D +G V ++F++
Sbjct: 117 EDVDEIIKLTDLQEDLEGNVKYEDFVK 143
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 21 LSQQKKQEIKEAFELFD-TDG-SGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
LSQ + ++K+ FELF DG G +DA +L R LG E + + K G
Sbjct: 3 LSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFA-VGGTHKMGEK 61
Query: 79 AIDLDEF----EHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFT 134
++ +EF E +M E+ + + M+AF D++ G IS +++ + LG +
Sbjct: 62 SLPFEEFLPAYEGLMDC---EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 135 DREIHEMVEEAD--RDHDGEVNADEFIR 160
D ++ E+++ D D +G V ++F++
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%)
Query: 100 EELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFI 159
E+ +KAF + D+++ GK+S GD++ + LG TD E+ E+++ + D +GE++ +FI
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 39/63 (61%)
Query: 23 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDL 82
+ K ++ +AF++FD + +G + +L + LG ++T+ ++++++ V+ D +G ID
Sbjct: 1 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 60
Query: 83 DEF 85
+F
Sbjct: 61 KKF 63
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
Q++ QE+KEAF + D D G + +++ LG ++++ M+ K+ G ++
Sbjct: 1 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPLN 56
Query: 82 LDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEM 141
F + + K+ DS+E + AF + D+ K++ IK + +G NF E+
Sbjct: 57 FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 116
Query: 142 VEEADRDHDGEVNADEFIRMMK 163
+EA + G+ + +F M+K
Sbjct: 117 FKEAPVEG-GKFDYVKFTAMIK 137
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLD 83
+ ++E+ F +FD + G ID +EL +RA G + EE I ++ D DK+ G ID D
Sbjct: 7 KSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 66
Query: 84 EFEHMM 89
EF MM
Sbjct: 67 EFLKMM 72
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 44/66 (66%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
S+EEL F I D++ +G I ++ I R G + + +I ++++++D+++DG ++ DE
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 158 FIRMMK 163
F++MM+
Sbjct: 68 FLKMME 73
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+QE++EAF L+D +G+G I + + L ++ E ++ MI ++D DGSG +D +EF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 86 EHMMTA 91
+MT
Sbjct: 62 MGVMTG 67
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 99 KEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEF 158
++EL +AF + D++ NG IS ++ I EL + ++ M++E D D G V+ +EF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 159 IRMM 162
+ +M
Sbjct: 62 MGVM 65
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLD 83
+ ++E+ + F +FD + G ID +EL + ++A G +TE+ I +++ D DK+ G ID D
Sbjct: 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 71
Query: 84 EFEHMM 89
EF M
Sbjct: 72 EFLEFM 77
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
++EEL F + D++ +G I ++K + + G T+ +I E++++ D+++DG ++ DE
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 158 FIRMMK 163
F+ MK
Sbjct: 73 FLEFMK 78
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLD 83
+ ++E+ + F +FD + G ID +EL + ++A G +TE+ I +++ D DK+ G ID D
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
Query: 84 EFEHMM 89
EF M
Sbjct: 62 EFLEFM 67
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
S+EEL F + D++ +G I ++K + + G T+ +I E++++ D+++DG ++ DE
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 158 FIRMMK 163
F+ MK
Sbjct: 63 FLEFMK 68
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLD 83
+ ++E+ + F +FD + G ID +EL + ++A G +TE+ I +++ D DK+ G ID D
Sbjct: 4 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 63
Query: 84 EFEHMM 89
EF M
Sbjct: 64 EFLEFM 69
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
S+EEL F + D++ +G I ++K + + G T+ +I E++++ D+++DG ++ DE
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 158 FIRMMK 163
F+ MK
Sbjct: 65 FLEFMK 70
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLD 83
+ ++E+ + F +FD + G ID +EL + ++A G +TE+ I +++ D DK+ G ID D
Sbjct: 7 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
Query: 84 EFEHMM 89
EF M
Sbjct: 67 EFLEFM 72
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
++EEL F + D++ +G I ++K + + G T+ +I E++++ D+++DG ++ DE
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 158 FIRMMK 163
F+ MK
Sbjct: 68 FLEFMK 73
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
L ++ +E++EAF FD D G I+ ++L MR +G+ TE ++ ++ ++ + G +
Sbjct: 4 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 63
Query: 81 DLDEFEHMMTAKI 93
D D+F +M K+
Sbjct: 64 DFDDFVELMGPKL 76
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 100 EELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFI 159
EEL +AF D+D +G I+ D+ R +G T+ E+ E+ ++ + + G V+ D+F+
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 160 RMM 162
+M
Sbjct: 70 ELM 72
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
F+ FDT+G G I + EL A++ LG +T +++ +M+A++D DG G I DEF A
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75
Query: 93 IG 94
G
Sbjct: 76 RG 77
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 104 KAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEF 158
+ F D + +GKIS+ ++ + LG + T E+ M+ E D D DG ++ DEF
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+++ F+ FDT+G G I EL A+R LG + +++ +M+A++D DG G ID +EF
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 88 MMTAKIG 94
A G
Sbjct: 62 FCNANPG 68
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 100 EELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFI 159
+++ + F D + +GKIS ++ R LG D E+ M+ E D D DG ++ +EFI
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 60
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLD 83
+ ++E+ + F +FD + G ID EL + ++A G +TE+ I +++ D DK+ G ID D
Sbjct: 3 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 62
Query: 84 EFEHMM 89
EF M
Sbjct: 63 EFLEFM 68
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADE 157
S+EEL F + D++ +G I ++K + + G T+ +I E++++ D+++DG ++ DE
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 158 FIRMMK 163
F+ MK
Sbjct: 64 FLEFMK 69
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+++ F+ FDT+G G I EL A+R LG + +++ +M+A++D DG G ID +EF
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 88 MMTAKIG 94
A G
Sbjct: 63 FCNANPG 69
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 100 EELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFI 159
+++ + F D + +GKIS ++ R LG D E+ M+ E D D DG ++ +EFI
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 61
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
QE+KEAF + D D G + +++ LG ++++ M+ K+ G ++ F
Sbjct: 4 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPLNFTMFL 59
Query: 87 HMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEAD 146
+ + K+ DS+E + AF + D+ K++ IK + +G NF E+ +EA
Sbjct: 60 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 119
Query: 147 RDHDGEVNADEFIRMMK 163
+ G+ + +F M+K
Sbjct: 120 VEG-GKFDYVKFTAMIK 135
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 23 QQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDL 82
Q K E + F+ FD +G G I A EL A++ LG +T +++ M+A++D DG G I
Sbjct: 5 PQDKAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISF 63
Query: 83 DEFEHMMTAKIG 94
EF A G
Sbjct: 64 QEFTDFGRANRG 75
Score = 33.1 bits (74), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 99 KEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEF 158
K E + F D + +GKISA ++ + LG + T E+ M+ E D D DG ++ EF
Sbjct: 8 KAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAI 80
LS+++ +KE F++ DTD SGTI EL ++ +G E+ E +I ++ D D SG I
Sbjct: 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
Query: 81 DLDEF 85
D EF
Sbjct: 77 DYGEF 81
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 77 SGAIDLDEFEHMMTAKIGERDSKEE---LMKAFHIIDQDNNGKISAGDIKRIARELGVNF 133
SG ID D+ +HM ER S+EE L + F +ID DN+G I+ ++K + +G
Sbjct: 3 SGHID-DDDKHM-----AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL 56
Query: 134 TDREIHEMVEEADRDHDGEVNADEFI 159
+ EI ++++ AD D G ++ EFI
Sbjct: 57 MESEIKDLMDAADIDKSGTIDYGEFI 82
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 21 LSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-MTEEQINQMIADVDKDGSGA 79
+ Q ++EI AF++FD +G G ID E M+ +G E +T+ ++ + + + D+DG+G
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 80 IDLDEFEHMM 89
ID+ EF ++
Sbjct: 62 IDIPEFMDLI 71
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 96 RDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV-NFTDREIHEMVEEADRDHDGEVN 154
+D +EE+++AF + D + +G I + K I +++G TD E+ E ++EAD D +G ++
Sbjct: 4 QDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 63
Query: 155 ADEFIRMMKRT 165
EF+ ++K++
Sbjct: 64 IPEFMDLIKKS 74
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 83 DEFEHM-MTAKIG-ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN---FTDRE 137
D F+H AK+G S +++ KAF++IDQD +G I ++K + + TD E
Sbjct: 22 DSFKHKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAE 81
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
+ + D+D DG + DEF M+K
Sbjct: 82 TKAFLADGDKDGDGMIGVDEFAAMIK 107
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE---MTEEQINQMIADVDKDG 76
GL+ + ++K+AF + D D SG I+ EL + ++ +T+ + +AD DKDG
Sbjct: 34 GLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDG 93
Query: 77 SGAIDLDEFEHMMTA 91
G I +DEF M+ A
Sbjct: 94 DGMIGVDEFAAMIKA 108
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 19 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSG 78
GL+Q+ + I + + FDT+ G +D E A+ + E E+++ D DG+G
Sbjct: 49 QGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNG 108
Query: 79 AIDLDEFEHMMTAKIG----ERDSKEELMK-AFHIIDQDNNGKIS 118
+ID +E M A + S EE + FH ID +N+G+++
Sbjct: 109 SIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELT 153
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 60 MTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISA 119
+ + IN+ I+ KD G D F H++ K G+ D+ ++ + F I+D+D +G I
Sbjct: 6 LKADDINKAISAF-KD-PGTFDYKRFFHLVGLK-GKTDA--QVKEVFEILDKDQSGFIEE 60
Query: 120 GDIKRIAREL---GVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRT 165
++K + + G + D E ++ D DHDG++ ADEF +M+ +
Sbjct: 61 EELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEQINQMIADVDKDG 76
GL + ++KE FE+ D D SG I+ +EL ++ G ++ + + ++A D D
Sbjct: 34 GLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDH 93
Query: 77 SGAIDLDEFEHMMT 90
G I DEF M+
Sbjct: 94 DGKIGADEFAKMVA 107
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 12 DKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIAD 71
+K+R + Q + F D DGS ++DA E + LG + + + +
Sbjct: 22 EKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRK 81
Query: 72 VDKDGSGAIDLDEFEHMMTAKIGERDSKEELM-KAFHIIDQDNNGKISAGDIKRI 125
D++GSG +DL+EF + + + ++E ++ AF +D+ +G ++ D++ +
Sbjct: 82 WDRNGSGTLDLEEFLRALRPPMSQ--AREAVIAAAFAKLDRSGDGVVTVDDLRGV 134
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 102 LMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRM 161
L + F +D+D + + A + ++ +LG+ E + + DR+ G ++ +EF+R
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 162 MK 163
++
Sbjct: 99 LR 100
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIAD-VDKDGSGAIDLDEFEHMMTA 91
F+ D +G G++ +E+ A + + EQ+ Q+I +D DG+G IDL EF A
Sbjct: 6 FKQLDANGDGSVSYEEVK-AFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTK-FAA 63
Query: 92 KIGERDSKEE---LMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRD 148
+ E+D +E L + ++D D +GK++ ++ ++ G ++ + + +AD +
Sbjct: 64 AVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGY----EKVVDQIMKADAN 119
Query: 149 HDGEVNADEFI 159
DG + +EF+
Sbjct: 120 GDGYITLEEFL 130
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+K ++L D DG G + +E+ + G+E +QI + D +G G I L+EF
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMK----ADANGDGYITLEEF 129
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
++ FDTD SGTI + EL A A GF + E N MI D SG +D D F +
Sbjct: 94 YKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYN-MIIRRYSDESGNMDFDNFISCLV-- 150
Query: 93 IGERDSKEELMKAFHIIDQDNNGKI 117
+ + +AF +D+D G+I
Sbjct: 151 -----RLDAMFRAFKSLDKDGTGQI 170
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 68 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAR 127
M+A +D D +G + +EF+++ ++ + + D D +G I + ++
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLW-------NNIKRWQAIYKQFDTDRSGTICSSELPGAFE 115
Query: 128 ELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
G + + ++ M+ D G ++ D FI + R
Sbjct: 116 AAGFHLNE-HLYNMIIRRYSDESGNMDFDNFISCLVR 151
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 17 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEQINQMIADVD 73
+ GLS+ ++K+ F D D SG +D +EL ++ E+TE + ++A D
Sbjct: 32 QTSGLSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAAD 91
Query: 74 KDGSGAIDLDEFEHMM 89
DG G I +EF+ M+
Sbjct: 92 NDGDGKIGAEEFQEMV 107
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRI-------ARELGVNFTDREIHEMVEEADRDHD 150
S ++ F ID D +G + ++K AREL T+ E ++ AD D D
Sbjct: 40 SANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGAREL----TESETKSLMAAADNDGD 95
Query: 151 GEVNADEFIRMM 162
G++ A+EF M+
Sbjct: 96 GKIGAEEFQEMV 107
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEQINQMIADVDKDG 76
GL ++K+ F+ D D SG I+ +EL +++ G ++T+ + + DKDG
Sbjct: 35 GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDG 94
Query: 77 SGAIDLDEFEHMM 89
G I +DEFE ++
Sbjct: 95 DGKIGIDEFETLV 107
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIAREL---GVNFTDREIHEMVEEADRDHDGEVN 154
S ++ K F ID D +G I ++K + + G + TD E ++ AD+D DG++
Sbjct: 40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIG 99
Query: 155 ADEF 158
DEF
Sbjct: 100 IDEF 103
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 83 DEFEH-MMTAKIG-ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN---FTDRE 137
D F H AK+G S +++ KAF IIDQD +G I ++K + + TD E
Sbjct: 23 DSFNHKAFFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGE 82
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
++ D D DG++ DEF ++K
Sbjct: 83 TKTFLKAGDSDGDGKIGVDEFTALVK 108
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAM---RALGFEMTEEQINQMIADVDKDG 76
GL+ + ++K+AF + D D SG I+ EL + + +A +T+ + + D DG
Sbjct: 35 GLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDG 94
Query: 77 SGAIDLDEFEHMMTA 91
G I +DEF ++ A
Sbjct: 95 DGKIGVDEFTALVKA 109
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 104 KAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMK 163
+ F D++ +GK+S + + +A FT +I + EE D D +GE+NADEF ++
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64
Query: 164 R 164
+
Sbjct: 65 K 65
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMM 89
K FE FD + G + E A T+E I + ++D DG+G ++ DEF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 73 DKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISA 119
DK+ G + LDEF + A ++E+++K F ID D NG+++A
Sbjct: 11 DKNKDGKLSLDEFREVALA-FSPYFTQEDIVKFFEEIDVDGNGELNA 56
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI-ADVDKDGSGAIDLDEFEHMMTA 91
F+ D +G G + +E+ A + + EQ+ Q+I +D DG+G ID +EF +
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 92 KIGE--RDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDH 149
G+ D K L + ++D D +GK++ ++ ++ G+ ++ E V +AD +
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANG 120
Query: 150 DGEVNADEFIRM 161
DG + +EF+
Sbjct: 121 DGYITLEEFLEF 132
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+K ++L D DG G + +E+ + G E EQ+ + D +G G I L+EF
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK----ADANGDGYITLEEF 129
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI-ADVDKDGSGAIDLDEFEHMMTA 91
F+ D +G G + +E+ A + + EQ+ Q+I +D DG+G ID +EF +
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 92 KIGE--RDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDH 149
G+ D K L + ++D D +GK++ ++ ++ G+ ++ E V +AD +
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANG 120
Query: 150 DGEVNADEFIRM 161
DG + +EF+
Sbjct: 121 DGYITLEEFLEF 132
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+K ++L D DG G + +E+ + G E EQ+ + D +G G I L+EF
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK----ADANGDGYITLEEF 129
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 98 SKEELMKAFHII--DQDNNGKISAGDIKRIARELGVNFTD--REIHEMVEEADRDHDGEV 153
S EE+ AF + + + +IS ++K + + LG + + EM+EE D++ DGEV
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 154 NADEFIRMMKRTT 166
+ +EF+ MMK+ +
Sbjct: 63 SFEEFLVMMKKIS 75
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 24 QKKQEIKEAFELFDT-DG-SGTIDAKELNVAMRALGFEMTE--EQINQMIADVDKDGSGA 79
+ +EIK AFE+F +G I +EL + M+ LG + + +++MI +VDK+G G
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 80 IDLDEFEHMM 89
+ +EF MM
Sbjct: 62 VSFEEFLVMM 71
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 17 RHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEQINQMIADVD 73
+ GLS+ ++K+ F D D SG +D EL ++ E+TE + ++ D
Sbjct: 31 QTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAAD 90
Query: 74 KDGSGAIDLDEFEHMM 89
DG G I DEF+ M+
Sbjct: 91 NDGDGKIGADEFQEMV 106
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRI-------ARELGVNFTDREIHEMVEEADRDHD 150
S ++ F ID D +G + ++K AREL T+ E +++ AD D D
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL----TESETKSLMDAADNDGD 94
Query: 151 GEVNADEFIRMM 162
G++ ADEF M+
Sbjct: 95 GKIGADEFQEMV 106
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 83 DEFEH-MMTAKIG-ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN---FTDRE 137
D F H AK+G S +++ KAF IIDQD +G I ++K + + TD E
Sbjct: 22 DSFNHKAFFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGE 81
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
++ D D DG++ DE+ ++K
Sbjct: 82 TKTFLKAGDSDGDGKIGVDEWTALVK 107
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAM---RALGFEMTEEQINQMIADVDKDG 76
GL+ + ++K+AF + D D SG I+ EL + + +A +T+ + + D DG
Sbjct: 34 GLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDG 93
Query: 77 SGAIDLDEFEHMMTA 91
G I +DE+ ++ A
Sbjct: 94 DGKIGVDEWTALVKA 108
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
F++FD DGSGTI E R G +EE + D D SG +D+DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 73 DKDGSGAIDLDEFEHMMTAKI-GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
DKDGSG I LDE++ +I G S+E+ K F D DN+G++ ++ R + LG
Sbjct: 123 DKDGSGTITLDEWKAY--GRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTR--QHLGF 178
Query: 132 NFT 134
+T
Sbjct: 179 WYT 181
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 105 AFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
F I D+D +G I+ + K R G++ ++ + + + D D+ GE++ DE R
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTR 173
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 83 DEFEH-MMTAKIG-ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN---FTDRE 137
D F + AK+G S +++ KAF +IDQD +G I ++K + TD E
Sbjct: 23 DSFNYKAFFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAE 82
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
++ D D DG + DE+ ++K
Sbjct: 83 TKAFLKAGDSDGDGAIGVDEWAALVK 108
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF---EMTEEQINQMIADVDKDG 76
GL+ + +IK+AF + D D SG I+ EL + ++ +T+ + + D DG
Sbjct: 35 GLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDG 94
Query: 77 SGAIDLDEFEHMMTA 91
GAI +DE+ ++ A
Sbjct: 95 DGAIGVDEWAALVKA 109
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
++ FDTD SGTI + EL A A GF + + I MI D +G +D D F +
Sbjct: 83 YKRFDTDRSGTIGSNELPGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLV-- 139
Query: 93 IGERDSKEELMKAFHIIDQDNNGKI 117
+ + +AF +D++ G+I
Sbjct: 140 -----RLDAMFRAFRSLDKNGTGQI 159
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 68 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAR 127
M+A +D D +G + +EF+++ ++ ++ + D D +G I + ++
Sbjct: 52 MVAVMDSDTTGKLGFEEFKYLW-------NNIKKWQGIYKRFDTDRSGTIGSNELPGAFE 104
Query: 128 ELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
G + ++ I+ M+ D G ++ D FI + R
Sbjct: 105 AAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLVR 140
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
++ FDTD SGTI + EL A A GF + + I MI D +G +D D F +
Sbjct: 94 YKRFDTDRSGTIGSNELPGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLV-- 150
Query: 93 IGERDSKEELMKAFHIIDQDNNGKI 117
+ + +AF +D++ G+I
Sbjct: 151 -----RLDAMFRAFRSLDKNGTGQI 170
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 68 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAR 127
M+A +D D +G + +EF+++ ++ ++ + D D +G I + ++
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLW-------NNIKKWQGIYKRFDTDRSGTIGSNELPGAFE 115
Query: 128 ELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
G + ++ I+ M+ D G ++ D FI + R
Sbjct: 116 AAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLVR 151
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
++ FDTD SGTI + EL A A GF + + I MI D +G +D D F +
Sbjct: 94 YKRFDTDRSGTIGSNELPGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLV-- 150
Query: 93 IGERDSKEELMKAFHIIDQDNNGKI 117
+ + +AF +D++ G+I
Sbjct: 151 -----RLDAMFRAFRSLDKNGTGQI 170
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 68 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAR 127
M+A +D D +G + +EF+++ ++ ++ + D D +G I + ++
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLW-------NNIKKWQGIYKRFDTDRSGTIGSNELPGAFE 115
Query: 128 ELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
G + ++ I+ M+ D G ++ D FI + R
Sbjct: 116 AAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLVR 151
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Query: 27 QEIKEAFELFDTDGSGTIDAKE-LNV--AMRALGF---EMTEEQINQMIAD-VDKDGSGA 79
Q+++ F+L+D DG+G ID E LN+ A+RA+ MT E+ M+ D +D +G G
Sbjct: 88 QKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGE 147
Query: 80 IDLDEF 85
+ L+EF
Sbjct: 148 LSLEEF 153
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
F FD D SG++ A E+ +A+ A GF++ Q++Q+I D ID D F +
Sbjct: 613 FRKFDLDKSGSMSAYEMRMAIEAAGFKLP-CQLHQVIVARFADDELIIDFDNFVRCLV-- 669
Query: 93 IGERDSKEELMKAFHIIDQDNNGKISAGDIKRIA 126
E L K F +D +N G I I ++
Sbjct: 670 -----RLEILFKIFKQLDPENTGTIQLDLISWLS 698
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
++ F+TD SGTI + EL A A GF + + I MI D +G +D D F +
Sbjct: 810 YKRFETDRSGTIGSNELPGAFEAAGFHLN-QHIYSMIIRRYSDETGNMDFDNFISCLV-- 866
Query: 93 IGERDSKEELMKAFHIIDQDNNGKI 117
+ + +AF +D++ G+I
Sbjct: 867 -----RLDAMFRAFRSLDKNGTGQI 886
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 53 MRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQD 112
+R GF + E M+ +D+DG+G + L EF +++ +I + F D D
Sbjct: 569 LRTNGFSL--ESCRSMVNLMDRDGNGKLGLVEF-NILWNRI------RNYLTIFRKFDLD 619
Query: 113 NNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
+G +SA +++ G ++H+++ D + ++ D F+R + R
Sbjct: 620 KSGSMSAYEMRMAIEAAGFKLP-CQLHQVIVARFADDELIIDFDNFVRCLVR 670
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 68 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAR 127
M+A +D D +G + +EF+++ ++ ++ + + D +G I + ++
Sbjct: 779 MVAVMDSDTTGKLGFEEFKYLW-------NNIKKWQGIYKRFETDRSGTIGSNELPGAFE 831
Query: 128 ELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
G + ++ I+ M+ D G ++ D FI + R
Sbjct: 832 AAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLVR 867
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 30/154 (19%)
Query: 36 FDTDGSGTIDAKELNVAMRAL-------GFEMTEEQINQMIADVDKDGS---GAIDLDEF 85
FD DGSG ++ KEL ++ L G E++ E M VD+ G G I + E
Sbjct: 25 FDADGSGYLEGKELQNLIQELLQARKKAGLELSPE----MKTFVDQYGQRDDGKIGIVEL 80
Query: 86 EHMMTA--------KIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAREL--GVNFT- 134
H++ + + S EE MK + D D++G I ++K ++L N T
Sbjct: 81 AHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTV 140
Query: 135 -DREIHE----MVEEADRDHDGEVNADEFIRMMK 163
D ++ E M++ D ++DG++ E R++
Sbjct: 141 DDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLP 174
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 22 SQQKK--QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTE--------EQINQMIAD 71
QQ K +E + + +DTD SG I+ +EL ++ L + + E + M+
Sbjct: 96 CQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKL 155
Query: 72 VDKDGSGAIDLDEFEHMMTAK-------IGERDSKEELMKAFHIIDQDNNGKISAGDIKR 124
D + G ++L E ++ + G + +E KAF + DQD NG I ++
Sbjct: 156 FDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDA 215
Query: 125 IAREL 129
+ ++L
Sbjct: 216 LLKDL 220
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEQINQMIADVDK 74
GL ++ ++K+ F + D D SG I+ EL ++ GF +++ ++ ++A DK
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILK--GFSSDARDLSAKETKTLMAAGDK 91
Query: 75 DGSGAIDLDEFEHMM 89
DGSG I+++EF ++
Sbjct: 92 DGSGKIEVEEFSTLV 106
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 95 ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD---REIHEMVEEADRDHDG 151
++ S +++ K FHI+D+D +G I ++ I + + D +E ++ D+D G
Sbjct: 36 KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSG 95
Query: 152 EVNADEFIRMM 162
++ +EF ++
Sbjct: 96 KIEVEEFSTLV 106
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAM-RALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+ F+ D D SG I EL A+ + +I+ D++ ++ EF
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT- 86
Query: 88 MMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
G + F D+DN+G I ++K+ G +D+ ++ + DR
Sbjct: 87 ------GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 140
Query: 148 DHDGEVNADEFIR---MMKRTT 166
G++ D+FI+ +++R T
Sbjct: 141 QGRGQIAFDDFIQGCIVLQRLT 162
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+ + F +D D SG ID EL A+ G+ ++++ + +I D+ G G I D+F
Sbjct: 94 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 83 DEFEH-MMTAKIG-ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN---FTDRE 137
D F H AK+G S +++ KAF II QD +G I ++K + + TD E
Sbjct: 22 DSFNHKAFFAKVGLTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGE 81
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
++ D D DG++ DE+ ++K
Sbjct: 82 TKTFLKAGDSDGDGKIGVDEWTALVK 107
Score = 32.7 bits (73), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAM---RALGFEMTEEQINQMIADVDKDG 76
GL+ + ++K+AF + D SG I+ EL + + +A +T+ + + D DG
Sbjct: 34 GLTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDG 93
Query: 77 SGAIDLDEFEHMMTA 91
G I +DE+ ++ A
Sbjct: 94 DGKIGVDEWTALVKA 108
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAM-RALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+ F+ D D SG I EL A+ + +I+ D++ ++ EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT- 85
Query: 88 MMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
G + F D+DN+G I ++K+ G +D+ ++ + DR
Sbjct: 86 ------GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 139
Query: 148 DHDGEVNADEFIR---MMKRTT 166
G++ D+FI+ +++R T
Sbjct: 140 QGRGQIAFDDFIQGCIVLQRLT 161
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+ + F +D D SG ID EL A+ G+ ++++ + +I D+ G G I D+F
Sbjct: 93 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 34/178 (19%)
Query: 12 DKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELN----VAMRALGFEMTEEQINQ 67
D IR R G SQ + F D + G + +L +A+ LG ++
Sbjct: 15 DSIR-RETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLG--------DR 65
Query: 68 MIADVDKDGSGAIDLDEFEHMMT--AKIGERDS--------------KEELMKAFHIIDQ 111
+I DGS +D F ++ + + D+ + +L AF + D
Sbjct: 66 IIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDL 125
Query: 112 DNNGKISAGDIKRIAREL-GVNFTDREIHEM----VEEADRDHDGEVNADEFIRMMKR 164
D +GKIS ++ ++ R + GV T+ ++ + V+EAD D DG V+ EF + +++
Sbjct: 126 DRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK 183
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE---MTEEQINQMIADVDKDG 76
GLS + +IK+ F + D D SG I+ +EL + ++ +T + +A D DG
Sbjct: 34 GLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDG 93
Query: 77 SGAIDLDEFEHMMTA 91
G I ++EF+ ++ A
Sbjct: 94 DGKIGVEEFQSLVKA 108
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN---FTDREIHEMVEEADRDHDGEVN 154
+ +++ K F I+DQD +G I +++ + + T E + D D DG++
Sbjct: 39 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIG 98
Query: 155 ADEFIRMMK 163
+EF ++K
Sbjct: 99 VEEFQSLVK 107
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAM-RALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+ F+ D D SG I EL A+ + +I+ D++ ++ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT- 67
Query: 88 MMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
G + F D+DN+G I ++K+ G +D+ ++ + DR
Sbjct: 68 ------GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 121
Query: 148 DHDGEVNADEFIR---MMKRTT 166
G++ D+FI+ +++R T
Sbjct: 122 QGRGQIAFDDFIQGCIVLQRLT 143
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+ + F +D D SG ID EL A+ G+ ++++ + +I D+ G G I D+F
Sbjct: 75 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
++ FD D SGTI + EL A A GF + E + MI D G +D D F +
Sbjct: 83 YKQFDVDRSGTIGSSELPGAFEAAGFHLN-EHLYSMIIRRYSDEGGNMDFDNFISCLV-- 139
Query: 93 IGERDSKEELMKAFHIIDQDNNGKI 117
+ + +AF +D+D G+I
Sbjct: 140 -----RLDAMFRAFKSLDKDGTGQI 159
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 68 MIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIAR 127
M+A +D D +G + +EF+++ ++ ++ + D D +G I + ++
Sbjct: 52 MVAVMDSDTTGKLGFEEFKYLW-------NNIKKWQAIYKQFDVDRSGTIGSSELPGAFE 104
Query: 128 ELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
G + + ++ M+ D G ++ D FI + R
Sbjct: 105 AAGFHLNE-HLYSMIIRRYSDEGGNMDFDNFISCLVR 140
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE---MTEEQINQMIADVDKDG 76
GLS + +IK+ F + D D SG I+ +EL + ++ +T + +A D DG
Sbjct: 35 GLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDG 94
Query: 77 SGAIDLDEFEHMMTA 91
G I ++EF+ ++ A
Sbjct: 95 DGKIGVEEFQSLVKA 109
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN---FTDREIHEMVEEADRDHDGEVN 154
+ +++ K F I+DQD +G I +++ + + T E + D D DG++
Sbjct: 40 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIG 99
Query: 155 ADEFIRMMK 163
+EF ++K
Sbjct: 100 VEEFQSLVK 108
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAM-RALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+ F+ D D SG I EL A+ + +I+ D++ ++ EF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT- 63
Query: 88 MMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
G + F D+DN+G I ++K+ G +D+ ++ + DR
Sbjct: 64 ------GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 117
Query: 148 DHDGEVNADEFIR---MMKRTT 166
G++ D+FI+ +++R T
Sbjct: 118 QGRGQIAFDDFIQGCIVLQRLT 139
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+ + F +D D SG ID EL A+ G+ ++++ + +I D+ G G I D+F
Sbjct: 71 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAM-RALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+ F+ D D SG I EL A+ + +I+ D++ ++ EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT- 64
Query: 88 MMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
G + F D+DN+G I ++K+ G +D+ ++ + DR
Sbjct: 65 ------GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 118
Query: 148 DHDGEVNADEFIR---MMKRTT 166
G++ D+FI+ +++R T
Sbjct: 119 QGRGQIAFDDFIQGCIVLQRLT 140
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+ + F +D D SG ID EL A+ G+ ++++ + +I D+ G G I D+F
Sbjct: 72 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
++ F FDTD SGT+D +EL A+ +GF ++ + +N + +G D
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFD 157
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 42 GTIDAKELNVAMRALGF-----EMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGER 96
G IDA EL + G E M++ +D+D SG + +EF+ + G R
Sbjct: 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR 106
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
+ F D D +G + ++++ +G + + ++ + + +G++ D
Sbjct: 107 -------QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR--YSTNGKITFD 157
Query: 157 EFI 159
++I
Sbjct: 158 DYI 160
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEQINQMIADVDK 74
GL ++ ++K+ F + D D SG I+ EL ++ GF +++ ++ ++A DK
Sbjct: 35 GLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILK--GFSPDARDLSAKETKMLMAAGDK 92
Query: 75 DGSGAIDLDEFEHMMT 90
DG G I +DEF ++
Sbjct: 93 DGDGKIGVDEFSTLVA 108
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 95 ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD---REIHEMVEEADRDHDG 151
++ S +++ K FH++D+D +G I ++ I + + D +E ++ D+D DG
Sbjct: 37 KKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDG 96
Query: 152 EVNADEFIRMMKRT 165
++ DEF ++ +
Sbjct: 97 KIGVDEFSTLVAES 110
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF---- 85
++ F FD+D SGT+D +EL A+ +GF + + +N + SG I D++
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYST--SGKITFDDYIACC 132
Query: 86 --EHMMTAKIGERDSKEELMKAF 106
+T RDS ++ M F
Sbjct: 133 VKLRALTDSFRRRDSAQQGMVNF 155
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 14/123 (11%)
Query: 42 GTIDAKELNVAMRALGF-----EMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGER 96
G IDA EL + G E M++ +D+D SG + +EF+ + G R
Sbjct: 16 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR 75
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
+ F D D +G + ++++ +G + ++ + + G++ D
Sbjct: 76 -------QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR--YSTSGKITFD 126
Query: 157 EFI 159
++I
Sbjct: 127 DYI 129
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
+ I E F DT+ +G++ +E+ + ++G + + IN+++ +D + G I EF
Sbjct: 39 KYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITYTEF- 95
Query: 87 HMMTAKIGERDSKEELMKA-FHIIDQDNNGKISAGDIKRIARE 128
M ++ + +KA F+ ID+D +G IS DI + +
Sbjct: 96 --MAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLVHD 136
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAM-RALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+ F+ D D SG I EL A+ + +I+ D++ ++ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT- 67
Query: 88 MMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
G + F D+DN+G I ++K+ G +D+ ++ + DR
Sbjct: 68 ------GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDR 121
Query: 148 DHDGEVNADEFIR---MMKRTT 166
G++ D+FI+ +++R T
Sbjct: 122 QGRGQIAFDDFIQGCIVLQRLT 143
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+ + F +D D SG ID EL A+ G+ ++++ + +I D+ G G I D+F
Sbjct: 75 DWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 38.5 bits (88), Expect = 0.002, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 25 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
K Q+ ++ + D D SGT+++ E+ A+ GF+M Q++Q+I D ID D
Sbjct: 602 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMP-CQLHQVIVARFADDQLIIDFDN 660
Query: 85 FEHMMTAKIGERDSKEELMKAFHIIDQDNNGKI 117
F + E L K F +D +N G I
Sbjct: 661 FVRCLV-------RLETLFKIFKQLDPENTGTI 686
Score = 34.7 bits (78), Expect = 0.025, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 53 MRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQD 112
+++ GF + E M+ +D DGSG + L EF +++ KI ++ K + ID D
Sbjct: 566 IKSDGFSI--ETCKIMVDMLDSDGSGKLGLKEF-YILWTKI------QKYQKIYREIDVD 616
Query: 113 NNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
+G +++ ++++ E G ++H+++ D ++ D F+R + R
Sbjct: 617 RSGTMNSYEMRKALEEAGFKMP-CQLHQVIVARFADDQLIIDFDNFVRCLVR 667
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 83 DEFEH-MMTAKIG-ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN---FTDRE 137
D F H AK+G S +++ KAF II QD +G I ++K + + TD E
Sbjct: 22 DSFNHKAFFAKVGLTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGE 81
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMK 163
++ D D DG++ D++ ++K
Sbjct: 82 TKTFLKAGDSDGDGKIGVDDWTALVK 107
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAM---RALGFEMTEEQINQMIADVDKDG 76
GL+ + ++K+AF + D SG I+ EL + + +A +T+ + + D DG
Sbjct: 34 GLTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDG 93
Query: 77 SGAIDLDEFEHMMTA 91
G I +D++ ++ A
Sbjct: 94 DGKIGVDDWTALVKA 108
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE-----MTEEQINQMIADVDK 74
G+S++ ++KE F + D D SG I+ EL ++ FE +T + +A D
Sbjct: 34 GMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQR--FESGARVLTASETKTFLAAADH 91
Query: 75 DGSGAIDLDEFEHMM 89
DG G I +EF+ M+
Sbjct: 92 DGDGKIGAEEFQEMV 106
Score = 33.1 bits (74), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 96 RDSKEELMKAFHIIDQDNNGKISAGDIKRIAR--ELGVN-FTDREIHEMVEEADRDHDGE 152
+ S +L + F I+D D +G I ++K + E G T E + AD D DG+
Sbjct: 37 KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGK 96
Query: 153 VNADEFIRMMK 163
+ A+EF M++
Sbjct: 97 IGAEEFQEMVQ 107
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 73 DKDGSGAIDLDEFEHMMTAKI-GERDSKEELMKAFHIIDQDNNGKISAGDIKRIA----R 127
D D +G ID EF ++ GE + K L+ AF + D DNNG IS ++ RI +
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGELNDK--LIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130
Query: 128 ELGV--------NFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
+G + ++ ++++ D++ DG++ +EF KR
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 14/67 (20%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEM-------------TEEQINQMIADVDKDGSG 78
AF+L+D D +G I E+ + A+ ++M E+++N++ +DK+ G
Sbjct: 104 AFQLYDLDNNGLISYDEMLRIVDAI-YKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDG 162
Query: 79 AIDLDEF 85
+ L+EF
Sbjct: 163 QLTLEEF 169
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
F++FD DGSGTI E + G ++E D D SG +D+DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 73 DKDGSGAIDLDEFEHMMTAKI-GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
DKDGSG I LDE++ KI G S+E+ F D DN+G + ++ R + LG
Sbjct: 123 DKDGSGTITLDEWKAY--GKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR--QHLGF 178
Query: 132 NFT 134
+T
Sbjct: 179 WYT 181
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
F++FD DGSGTI E + G ++E D D SG +D+DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 73 DKDGSGAIDLDEFEHMMTAKI-GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
DKDGSG I LDE++ KI G S+E+ F D DN+G + ++ R + LG
Sbjct: 123 DKDGSGTITLDEWKAY--GKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR--QHLGF 178
Query: 132 NFT 134
+T
Sbjct: 179 WYT 181
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
F++FD DGSGTI E + G ++E D D SG +D+DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 73 DKDGSGAIDLDEFEHMMTAKI-GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
DKDGSG I LDE++ KI G S+E+ F D DN+G + ++ R + LG
Sbjct: 123 DKDGSGTITLDEWKAY--GKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTR--QHLGF 178
Query: 132 NFT 134
+T
Sbjct: 179 WYT 181
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 83 DEFEH-MMTAKIG-ERDSKEELMKAFHIIDQDNNGKISAGDIKRI-------ARELGVNF 133
D F + AK G S +++ KAF IDQD +G I ++K AR L
Sbjct: 23 DSFSYKAFFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARAL---- 78
Query: 134 TDREIHEMVEEADRDHDGEVNADEFIRMMK 163
TD E ++ D D DG + +E++ ++K
Sbjct: 79 TDAETKAFLKAGDSDGDGAIGVEEWVALVK 108
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 19 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNV---AMRALGFEMTEEQINQMIADVDKD 75
GLS + +IK+AF D D SG I+ EL + +A +T+ + + D D
Sbjct: 34 CGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSD 93
Query: 76 GSGAIDLDEFEHMMTA 91
G GAI ++E+ ++ A
Sbjct: 94 GDGAIGVEEWVALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 83 DEFEH-MMTAKIG-ERDSKEELMKAFHIIDQDNNGKISAGDIKRI-------ARELGVNF 133
D F + AK G S +++ KAF IDQD +G I ++K AR L
Sbjct: 22 DSFSYKAFFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARAL---- 77
Query: 134 TDREIHEMVEEADRDHDGEVNADEFIRMMK 163
TD E ++ D D DG + +E++ ++K
Sbjct: 78 TDAETKAFLKAGDSDGDGAIGVEEWVALVK 107
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 19 HGLSQQKKQEIKEAFELFDTDGSGTIDAKELNV---AMRALGFEMTEEQINQMIADVDKD 75
GLS + +IK+AF D D SG I+ EL + +A +T+ + + D D
Sbjct: 33 CGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSD 92
Query: 76 GSGAIDLDEFEHMMTA 91
G GAI ++E+ ++ A
Sbjct: 93 GDGAIGVEEWVALVKA 108
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 21 LSQQKKQEIKE----AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDG 76
SQ KK I+ F++FD DGSG+I E G ++E + D D
Sbjct: 106 WSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDN 165
Query: 77 SGAIDLDE 84
SG +D+DE
Sbjct: 166 SGKLDVDE 173
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 73 DKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVN 132
DKDGSG+I LDE++ G S E+ K F D DN+GK+ ++ R + LG
Sbjct: 126 DKDGSGSISLDEWK-TYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTR--QHLGFW 182
Query: 133 FT 134
+T
Sbjct: 183 YT 184
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ FDTD SGTI + EL A A GF + + I MI D +G +D D F
Sbjct: 90 YKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIYSMIIRRYSDETGNMDFDNF 141
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 67 QMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIA 126
M+A +D D +G + +EF+++ ++ ++ + D D +G I + ++
Sbjct: 58 SMVAVMDSDTTGKLGFEEFKYLW-------NNIKKWQGIYKRFDTDRSGTIGSNELPGAF 110
Query: 127 RELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
G + ++ I+ M+ D G ++ D FI + R
Sbjct: 111 EAAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLVR 147
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEQINQMIADVDK 74
GL ++ ++K+ F + D D SG I+ EL ++ GF +++ ++ ++A DK
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILK--GFSSDARDLSAKETKTLMAAGDK 91
Query: 75 DGSGAIDLDEFEHMMT 90
DG G I ++EF ++
Sbjct: 92 DGDGKIGVEEFSTLVA 107
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 95 ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD---REIHEMVEEADRDHDG 151
++ S +++ K FHI+D+D +G I ++ I + + D +E ++ D+D DG
Sbjct: 36 KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDG 95
Query: 152 EVNADEFIRMMKRT 165
++ +EF ++ +
Sbjct: 96 KIGVEEFSTLVAES 109
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRAL---GFEMTEEQINQMIADVDKDG 76
GL ++ ++K+ F + D D SG I+ EL ++ +++ ++ ++A DKDG
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDG 93
Query: 77 SGAIDLDEFEHMMT 90
G I ++EF ++
Sbjct: 94 DGKIGVEEFSTLVA 107
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 95 ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD---REIHEMVEEADRDHDG 151
++ S +++ K FHI+D+D +G I ++ I + + D +E ++ D+D DG
Sbjct: 36 KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDG 95
Query: 152 EVNADEFIRMMKRT 165
++ +EF ++ +
Sbjct: 96 KIGVEEFSTLVAES 109
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTA 91
F FD +G GTID +E +A+ E+++ + D DG+G I E ++ A
Sbjct: 68 VFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
Query: 92 ---------KIGERDSKEE--LMKAFHIIDQDNNGKISAGDIKRIAR 127
K+ E +S E K F +D + +GK+S + R A+
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 73 DKDGSGAIDLDEFEHMMTAKIGERDSKEELMK-AFHIIDQDNNGKISAGDIKRIARELGV 131
D +G G ID EF ++ + R E+ +K AF + D D NG IS ++ I + +
Sbjct: 73 DANGDGTIDFREF--IIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130
Query: 132 ------------NFTDREIHEMVEEADRDHDGEVNADEFIR 160
+ ++ ++ + D + DG+++ +EFIR
Sbjct: 131 MVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Query: 27 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM-------------TEEQINQMIADVD 73
Q++K AF ++D DG+G I E+ ++A+ ++M E++ ++ +D
Sbjct: 99 QKLKWAFSMYDLDGNGYISKAEMLEIVQAI-YKMVSSVMKMPEDESTPEKRTEKIFRQMD 157
Query: 74 KDGSGAIDLDEF 85
+ G + L+EF
Sbjct: 158 TNRDGKLSLEEF 169
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 23/162 (14%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM--------------TEEQINQMI 69
+ ++ I F FD DG+G ID + + A +AL E E + Q +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 70 ADV-DKDGSGAIDLDEFEHMMTAKIGERD------SKEELMKAFHIIDQDNNGKISAGDI 122
A + D+DG I +EF ++ ++ ++ L A + D D +G ++ D
Sbjct: 61 AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADT 120
Query: 123 KRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
R GV + + D D DG+V E + R
Sbjct: 121 ARALTAFGV--PEDLARQAAAALDTDGDGKVGETEIVPAFAR 160
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 13 KIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADV 72
++R + ++ + + A + DTDG G + + A+ A G + E+ Q A +
Sbjct: 84 RLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAAL 141
Query: 73 DKDGSGAI 80
D DG G +
Sbjct: 142 DTDGDGKV 149
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
++ F DTD SGT+D +EL A+ +GF ++ + +N + +G D
Sbjct: 106 RQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFD 157
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 42 GTIDAKELNVAMRALGF-----EMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGER 96
G IDA EL + G E M++ +D+D SG + +EF+ + G R
Sbjct: 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWR 106
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
+ F +D D +G + ++++ +G + + ++ + + +G++ D
Sbjct: 107 -------QHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR--YSTNGKITFD 157
Query: 157 EFI 159
++I
Sbjct: 158 DYI 160
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 20 GLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEQINQMIADVDK 74
GL ++ ++K+ F + D D G ID EL ++ GF +++ ++ ++A DK
Sbjct: 34 GLKKKSADDVKKVFHILDKDKDGFIDEDELGSILK--GFSSDARDLSAKETKTLMAAGDK 91
Query: 75 DGSGAIDLDEFEHMMT 90
DG G I ++EF ++
Sbjct: 92 DGDGKIGVEEFSTLVA 107
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 95 ERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD---REIHEMVEEADRDHDG 151
++ S +++ K FHI+D+D +G I ++ I + + D +E ++ D+D DG
Sbjct: 36 KKKSADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDG 95
Query: 152 EVNADEFIRMMKRT 165
++ +EF ++ +
Sbjct: 96 KIGVEEFSTLVAES 109
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
F++FD DGSGTI E + G ++E D D SG +D+DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 73 DKDGSGAIDLDEFEHMMTAKI-GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
DKDGSG I LDE++ KI G S+E+ F D D++G + ++ R + LG
Sbjct: 123 DKDGSGTITLDEWKAY--GKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTR--QHLGF 178
Query: 132 NFT 134
+T
Sbjct: 179 WYT 181
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 36.6 bits (83), Expect = 0.007, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 25 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
K Q+ ++ + D D SGT+++ E+ A+ GF++ Q++Q+I D ID D
Sbjct: 603 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 85 FEHMMTAKIGERDSKEELMKAFHIIDQDNNGKI 117
F + E L K F +D +N G I
Sbjct: 662 FVRCLV-------RLEILFKIFKQLDPENTGTI 687
Score = 36.6 bits (83), Expect = 0.007, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 53 MRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQD 112
+++ GF + E M+ +D+DGSG + L EF +++ KI ++ K + ID D
Sbjct: 567 IKSDGFSI--ETCKIMVDMLDEDGSGKLGLKEF-YILWTKI------QKYQKIYREIDVD 617
Query: 113 NNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
+G +++ ++++ E G ++H+++ D + ++ D F+R + R
Sbjct: 618 RSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDNFVRCLVR 668
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 36.6 bits (83), Expect = 0.007, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 25 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
K Q+ ++ + D D SGT+++ E+ A+ GF++ Q++Q+I D ID D
Sbjct: 603 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 85 FEHMMTAKIGERDSKEELMKAFHIIDQDNNGKI 117
F + E L K F +D +N G I
Sbjct: 662 FVRCLV-------RLEILFKIFKQLDPENTGTI 687
Score = 36.6 bits (83), Expect = 0.008, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 53 MRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQD 112
+++ GF + E M+ +D+DGSG + L EF +++ KI ++ K + ID D
Sbjct: 567 IKSDGFSI--ETCKIMVDMLDEDGSGKLGLKEF-YILWTKI------QKYQKIYREIDVD 617
Query: 113 NNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
+G +++ ++++ E G ++H+++ D + ++ D F+R + R
Sbjct: 618 RSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDNFVRCLVR 668
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 36.6 bits (83), Expect = 0.007, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 25 KKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
K Q+ ++ + D D SGT+++ E+ A+ GF++ Q++Q+I D ID D
Sbjct: 603 KIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 85 FEHMMTAKIGERDSKEELMKAFHIIDQDNNGKI 117
F + E L K F +D +N G I
Sbjct: 662 FVRCLV-------RLEILFKIFKQLDPENTGTI 687
Score = 36.6 bits (83), Expect = 0.008, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 53 MRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQD 112
+++ GF + E M+ +D+DGSG + L EF +++ KI ++ K + ID D
Sbjct: 567 IKSDGFSI--ETCKIMVDMLDEDGSGKLGLKEF-YILWTKI------QKYQKIYREIDVD 617
Query: 113 NNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
+G +++ ++++ E G ++H+++ D + ++ D F+R + R
Sbjct: 618 RSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDNFVRCLVR 668
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDE 84
F++FD DGSGTI E + G ++E D D +G +D+DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
Score = 33.1 bits (74), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 73 DKDGSGAIDLDEFEHMMTAKI-GERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
DKDGSG I LDE++ KI G S+E+ F D DN G + ++ R + LG
Sbjct: 123 DKDGSGTITLDEWKAY--GKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTR--QHLGF 178
Query: 132 NFT 134
+T
Sbjct: 179 WYT 181
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIAD-----VDKDGSGAIDL 82
EI+ +ELF S ID +N L T ++ + AD D +G +
Sbjct: 46 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILGF 104
Query: 83 DEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIA----RELGVNFTDREI 138
+EF ++ +++ +F + D G I ++K++ E G+N D I
Sbjct: 105 EEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVI 164
Query: 139 HEMV----EEADRDHDGEVNADEFIRMMKR 164
+++ EEAD HDG+++ +E+ ++ R
Sbjct: 165 EDIIDKTFEEADTKHDGKIDKEEWRSLVLR 194
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 105 AFHIIDQDNNGKISAGDIKRIAREL-GVNFTDREIHEM----VEEADRDHDGEVNADEFI 159
AF + D D + KIS ++ ++ R + GVN +D ++ + ++EAD+D D ++ EF+
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 160 RMMKRT 165
+++++
Sbjct: 178 KVLEKV 183
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 58 FEMTEEQINQMIADV--------DKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHII 109
FE E N+++ V DK+ G I+ DEF +TA +G SK E +AF+ +
Sbjct: 89 FEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA-LGM--SKAEAAEAFNQV 145
Query: 110 DQDNNGKISAGDIKRIARELGVNFTDREI 138
D + NG++S ++ R+ D E+
Sbjct: 146 DTNGNGELSLDELLTAVRDFHFGRLDVEL 174
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIAD-----VDKDGSGAIDL 82
EI+ +ELF S ID +N L T ++ + AD D +G +
Sbjct: 15 EIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILGF 73
Query: 83 DEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIA----RELGVNFTDREI 138
+EF ++ +++ +F + D G I ++K++ E G+N D I
Sbjct: 74 EEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVI 133
Query: 139 HEMV----EEADRDHDGEVNADEFIRMMKR 164
+++ EEAD HDG+++ +E+ ++ R
Sbjct: 134 EDIIDKTFEEADTKHDGKIDKEEWRSLVLR 163
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 105 AFHIIDQDNNGKISAGDIKRIAREL-GVNFTDREIHEM----VEEADRDHDGEVNADEFI 159
AF + D D + KIS ++ ++ R + GVN +D ++ + ++EAD+D D ++ EF+
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 160 RMMKRT 165
+++++
Sbjct: 178 KVLEKV 183
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 23/162 (14%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM--------------TEEQINQMI 69
+ ++ I F FD DG+G ID + + A +A+ E E + Q +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 70 ADV-DKDGSGAIDLDEFEHMMTAKIGERD------SKEELMKAFHIIDQDNNGKISAGDI 122
A + D+DG I +EF ++ ++ ++ L A + D D +G ++ D
Sbjct: 61 AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Query: 123 KRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKR 164
R GV + + D D DG+V E + R
Sbjct: 121 ARALTAFGV--PEDLARQAAAALDTDGDGKVGETEIVPAFAR 160
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 13 KIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADV 72
++R + ++ + + A + DTDG G + + A+ A G + E+ Q A +
Sbjct: 84 RLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAAL 141
Query: 73 DKDGSGAI 80
D DG G +
Sbjct: 142 DTDGDGKV 149
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 13/142 (9%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAM-RALGFEMTEEQINQMIADVDKDGSGAIDLDEFEH 87
+ F+ D D SG I EL A+ + +I+ D++ ++ EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT- 64
Query: 88 MMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADR 147
G + F D+DN+G I ++K+ G +D+ ++ + DR
Sbjct: 65 ------GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDR 116
Query: 148 DHDGEVNADEFIR---MMKRTT 166
G++ D+FI+ +++R T
Sbjct: 117 QGRGQIAFDDFIQGCIVLQRLT 138
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+ + F +D D SG ID EL A+ G+ ++++ + +I D+ G G I D+F
Sbjct: 72 DWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 85 FEHMMTAKIGERDSKE---ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE-IHE 140
+E M+ + D +E EL K F ++ I+A ++R + LG+ +E
Sbjct: 22 YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81
Query: 141 MVEEADRDHDGEVNADEFIRMMKR 164
MV E D D DG +N EF +M R
Sbjct: 82 MVREGDLDGDGALNQTEFCVLMVR 105
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 13/70 (18%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFE-----MTEEQINQMI------ADVDKDGSGAI 80
AF +FD D GT++ ++L+ + L E ++ ++ Q+I +D+D+DG+ I
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT--I 160
Query: 81 DLDEFEHMMT 90
+L EF+H+++
Sbjct: 161 NLSEFQHVIS 170
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 105 AFHIIDQDNNGKISAGDIKRIARELG-----VNFTDREIHEMV----EEADRDHDGEVNA 155
AF I D D++G ++ D+ R+ L + E+ +++ EE+D D DG +N
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 156 DEFIRMMKRTT 166
EF ++ R+
Sbjct: 163 SEFQHVISRSP 173
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 106 FHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
F IID+D NG IS + K + G+ + + E D D G+++ DE R
Sbjct: 115 FDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 72 VDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
+DKD +GAI LDE++ T G S E+ + F + D D +G++ ++ R + LG
Sbjct: 118 IDKDQNGAISLDEWK-AYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR--QHLGF 174
Query: 132 NFT 134
+T
Sbjct: 175 WYT 177
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 13/70 (18%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFE-----MTEEQINQMI------ADVDKDGSGAI 80
AF +FD D GT++ ++L+ + L E ++ ++ Q+I +D+D+DG+ I
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT--I 191
Query: 81 DLDEFEHMMT 90
+L EF+H+++
Sbjct: 192 NLSEFQHVIS 201
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 105 AFHIIDQDNNGKISAGDIKRIARELG-----VNFTDREIHEMV----EEADRDHDGEVNA 155
AF I D D++G ++ D+ R+ L + E+ +++ EE+D D DG +N
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 156 DEFIRMMKRTT 166
EF ++ R+
Sbjct: 194 SEFQHVISRSP 204
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDG 76
KE F D DGSGT++ EL A+ +G+ ++ + + ++ K+G
Sbjct: 73 KENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG 119
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 42 GTIDAKELNVAMRALGFEMTE-----EQINQMIADVDKDGSGAIDLDEFEHMMTAKIGER 96
G +DA+EL + G T E MIA +D+D +G + + F+ + A +
Sbjct: 14 GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWK 73
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
++ F +DQD +G + ++++ +G + + + +V+ + +G + D
Sbjct: 74 EN-------FMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFD 124
Query: 157 EFI 159
+++
Sbjct: 125 DYV 127
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDG 76
KE F D DGSGT++ EL A+ +G+ ++ + + ++ K+G
Sbjct: 73 KENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG 119
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 42 GTIDAKELNVAMRALGFEMTE-----EQINQMIADVDKDGSGAIDLDEFEHMMTAKIGER 96
G +DA+EL + G T E MIA +D+D +G + + F+ + A +
Sbjct: 14 GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWK 73
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
++ F +DQD +G + ++++ +G + + + +V+ + +G + D
Sbjct: 74 EN-------FMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFD 124
Query: 157 EFI 159
+++
Sbjct: 125 DYV 127
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 72 VDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
VDKD +GAI LDE++ T G S E+ + F + D D +G++ ++ R + LG
Sbjct: 118 VDKDQNGAITLDEWK-AYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR--QHLGF 174
Query: 132 NFT 134
+T
Sbjct: 175 WYT 177
Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 106 FHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
F I+D+D NG I+ + K + G+ + + E D D G+++ DE R
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 98 SKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTD---REIHEMVEEADRDHDGEVN 154
S +++ K FHI+D+D +G I ++ I + + D +E ++ D+D DG++
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 155 ADEFIRMMKRT 165
+EF ++ +
Sbjct: 63 VEEFSTLVAES 73
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRALGF-----EMTEEQINQMIADVDKDGSGAIDL 82
++K+ F + D D SG I+ EL ++ GF +++ ++ ++A DKDG G I +
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILK--GFSSDARDLSAKETKTLMAAGDKDGDGKIGV 63
Query: 83 DEFEHMMT 90
+EF ++
Sbjct: 64 EEFSTLVA 71
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAID 81
+++ Q ++ F FDT+G TID E A+ + E ++ DKD +G ID
Sbjct: 54 NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCID 113
Query: 82 ----LDEFEHMMTAK-----------IGERDSKEELM-KAFHIIDQDNNGKISAGDIKRI 125
LD E + K G+ + EE++ + F ++D++ +G++S +
Sbjct: 114 RQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEG 173
Query: 126 AR 127
AR
Sbjct: 174 AR 175
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTA 91
F FD + GT+D KE +A+ T +++ + D DG+G I +E ++TA
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 11 KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKEL 49
K+ + H + + Q+++ AF L+D DG+GTI E+
Sbjct: 83 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTA 91
F FD + GT+D KE +A+ T +++ + D DG+G I +E ++TA
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 11 KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKEL 49
K+ + H + + Q+++ AF L+D DG+GTI E+
Sbjct: 83 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTA 91
F FD + GT+D KE +A+ T +++ + D DG+G I +E ++TA
Sbjct: 68 VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 11 KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKEL 49
K+ + H + + Q+++ AF L+D DG+GTI E+
Sbjct: 83 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTA 91
F FD + GT+D KE +A+ T +++ + D DG+G I +E ++TA
Sbjct: 69 VFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 128
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 11 KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKEL 49
K+ + H + + Q+++ AF L+D DG+GTI E+
Sbjct: 84 KEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 122
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 106 FHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRT 165
+ ID D +G +S + K + +G + TD + D + +G+++ DEF+ +
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDF 167
Query: 166 TFG 168
FG
Sbjct: 168 LFG 170
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 72 VDKDGSGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGV 131
VDKD +GAI LDE++ T G S E+ + F + D D +G++ + R + LG
Sbjct: 118 VDKDQNGAITLDEWK-AYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTR--QHLGF 174
Query: 132 NFT 134
+T
Sbjct: 175 WYT 177
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 106 FHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIR 160
F I+D+D NG I+ + K + G+ + + E D D G+++ DE R
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTR 169
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 33.1 bits (74), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 106 FHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRT 165
+ ID D +G +S + K + +G + TD + D + +G+++ DEF+ +
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDF 167
Query: 166 TFG 168
FG
Sbjct: 168 LFG 170
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
++ DTD G + E ++A+G ++T+++ +D + +G I DEF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 33.1 bits (74), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKE--LNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLD 83
++EI++ + F D A+E + + + F E+ N + DKD +G I +
Sbjct: 24 RREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFE 83
Query: 84 EFEHMMTAKIGERDSKEE-LMKAFHIIDQDNNGKISAGD----IKRIARELGVNFTDRE- 137
EF +++ R + EE L AF + D +++G I+ + + + + +G T E
Sbjct: 84 EFITVLSTT--SRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNED 141
Query: 138 -------IHEMVEEADRDHDGEVNADEF 158
+ ++ + D++ DG + DEF
Sbjct: 142 EATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 106 FHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 162
F + D+DNNG I + + + ++ E D +HDG + DE + ++
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIV 125
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTA 91
F FD + GT+D K+ +A+ T +++ + D DG+G I +E ++TA
Sbjct: 68 VFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 11 KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKEL 49
K + H + + Q+++ AF L+D DG+GTI E+
Sbjct: 83 KQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 103 MKAFHI----IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEF 158
++AF + D + NG I +KR+ +LGV T E+ ++ E + + +F
Sbjct: 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDF 106
Query: 159 IRMM 162
+RMM
Sbjct: 107 LRMM 110
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 31 EAFEL----FDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
EAF++ FD +G+G ID L + LG T ++ ++I +V +F
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFL 107
Query: 87 HMMTAK 92
MM K
Sbjct: 108 RMMLGK 113
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 32 AFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTA 91
F FD + GT+D K+ +A+ T +++ + D DG+G I +E ++TA
Sbjct: 68 VFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA 127
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 11 KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKEL 49
K + H + + Q+++ AF L+D DG+GTI E+
Sbjct: 83 KQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHM 88
KE + FD +G+G ID L + LG T ++ ++I +V +F M
Sbjct: 53 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 112
Query: 89 MTAK 92
M K
Sbjct: 113 MLGK 116
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 109 IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 162
D + NG I +KR+ +LGV T E+ +++ E + +F+RMM
Sbjct: 60 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 113
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHM 88
KE + FD +G+G ID L + LG T ++ ++I +V +F M
Sbjct: 34 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 93
Query: 89 MTAK 92
M K
Sbjct: 94 MLGK 97
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 109 IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 162
D + NG I +KR+ +LGV T E+ +++ E + +F+RMM
Sbjct: 41 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 94
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 16 GRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE--------MTEEQINQ 67
G H S +++K AF+L+D +G I+ +EL + AL E M E +++
Sbjct: 101 GVFHP-SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDK 159
Query: 68 MIADVDKDGSGAIDLDEFEHMMT 90
D+ G ID+DE++ ++
Sbjct: 160 AFVQADRKNDGKIDIDEWKDFVS 182
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 64 QINQMIADVDKDGSGAIDLDEFEHMMTAKI--GERDSKEELMKAFHIIDQDNNGKIS 118
+I Q VD+D SG ++++E +M + G R S + ++ I D D NG IS
Sbjct: 52 RIYQWFMGVDRDRSGTLEINE---LMMGQFPGGIRLSPQTALRMMRIFDTDFNGHIS 105
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHM 88
I + F D D SGT++ EL + G ++ + +M+ D D +G I EF M
Sbjct: 53 IYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
Score = 26.6 bits (57), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D + + F +D+D +G + ++ G+ + + M+ D D +G ++
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 157 EFIRMMKRTTFGY 169
EF+ M K Y
Sbjct: 108 EFMAMYKFMELAY 120
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 35/64 (54%)
Query: 79 AIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREI 138
++ +++ +T + +RD+ EEL+K F D +++G ++ K I G T++E
Sbjct: 44 SLTYEQYLEYLTXCVHDRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEA 103
Query: 139 HEMV 142
++ +
Sbjct: 104 NDAL 107
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 11 KDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIA 70
K+ + H + + Q+++ AF L+D DG+GTI E+ + A+ +T E + +
Sbjct: 91 KEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLPD 150
Query: 71 D 71
D
Sbjct: 151 D 151
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 1 MASLYKGVSRKDKIRGRHHGLSQQKKQEI--------------KEAFELFDTDGSGTIDA 46
+ S Y+ KD GR ++QQ+ Q I + F FD++ GT+D
Sbjct: 35 LCSWYQSF-LKDCPTGR---ITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDF 90
Query: 47 KELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTA 91
KE +A+ T +++ + D DG+G I +E ++ A
Sbjct: 91 KEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXA 135
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 16 GRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFE--------MTEEQINQ 67
G H S +++K AF+L+D +G I+ +EL + AL E M E +++
Sbjct: 101 GVFHP-SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDK 159
Query: 68 MIADVDKDGSGAIDLDEFEHMMT 90
D+ G ID+DE++ ++
Sbjct: 160 AFVQADRKNDGKIDIDEWKDFVS 182
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI-ADVDKDGSGAIDLDEFEHM 88
K+ F LFD G G I L +RA+G+ T + + +I AD + ++ LD+ +
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 89 M 89
+
Sbjct: 67 I 67
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 73 DKDGSGAIDLDEFEHMMTAKIGERDSKEELMK-AFHIIDQDNNGKISAGDIKRIARELGV 131
D DG+GAI ++F ++ I R + E +K AF++ D + +G I+ ++ I + +
Sbjct: 139 DADGNGAIHFEDF--VVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI-Y 195
Query: 132 NFTDREIHEMVEE-------------ADRDHDGEVNADEFIRMMKR 164
+ R + ++ E DR+ DG V DEF+ ++
Sbjct: 196 DMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQK 241
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 77 SGAIDLDEFEHMMTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
+G +D D F+ + + + D+ F+ D D NG I D +G++ R
Sbjct: 106 TGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFV-----VGLSILLR 160
Query: 137 -EIHEMVEEA----DRDHDGEVNADEFIRMMK 163
+HE ++ A D + DG + +E + +MK
Sbjct: 161 GTVHEKLKWAFNLYDINKDGCITKEEMLAIMK 192
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 26 KQEIKEAFELFDTDGSGTIDAKELNV------AMRALGFEMTEEQINQMIADVDKDGSGA 79
K E++ AF+ D +G G + A EL A +AL + +E ++I DK+ G
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 80 IDLDEF 85
I +EF
Sbjct: 66 ISKEEF 71
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 99 KEELMKAFHIIDQDNNGKISAGDIKRIA------RELGVNFTDREIHEMVEEADRDHDGE 152
K EL AF +D + +G ++A +++ + L + ++++ AD++ DG+
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 153 VNADEFI 159
++ +EF+
Sbjct: 66 ISKEEFL 72
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 60 MTEEQINQMIADVDKDGSGAIDLDEFEHMM 89
+TEE I ++ D DK+ G ID DEF MM
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 26/30 (86%)
Query: 134 TDREIHEMVEEADRDHDGEVNADEFIRMMK 163
T+ +I ++++++D+++DG ++ DEF++MM+
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMME 32
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEF 85
+K ++L D DG G + +E+ + G E EQ+ + D +G G I L+EF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK----ADANGDGYITLEEF 59
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D K L + ++D D +GK++ ++ ++ G+ ++ E V +AD + DG + +
Sbjct: 2 DDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLE 57
Query: 157 EFIRM 161
EF+
Sbjct: 58 EFLEF 62
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 109 IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 162
D +N G+I +KR+ +LGV T E+ +M+ E ++ +F+ MM
Sbjct: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 109 IDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRMM 162
D +N G+I +KR+ +LGV T E+ +M+ E ++ +F+ MM
Sbjct: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 40 GSGTIDAKELNVAMRALGFEMT---EEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGER 96
G +ID N R LG + E++I ++ D + +++ ++ + ++
Sbjct: 30 GKISIDNASYNA--RKLGLAPSSIDEKKIKELYGD-------NLTYEQYLEYLSICVHDK 80
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDRE 137
D+ EEL+K F D + G ++ +K I G TD+E
Sbjct: 81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 129 LGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTTFGY 169
+G D EI ++E+ DR+ D EVN E++ + Y
Sbjct: 44 IGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALALIY 84
>pdb|1C4K|A Chain A, Ornithine Decarboxylase Mutant (Gly121tyr)
Length = 730
Score = 29.6 bits (65), Expect = 0.90, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIA-DVDKDGSGAI 80
S K +EA + FDTD V + A+G + T+ + +IA D + D A
Sbjct: 2 SSLKIASTQEARQYFDTD----------RVVVDAVGSDFTD--VGAVIAMDYETDVIDAA 49
Query: 81 DLDEF--EHMMTAKIGERDSKEELMKAFHIIDQDN 113
D +F K + S +EL K FHIID +N
Sbjct: 50 DATKFGIPVFAVTKDAQAISADELKKIFHIIDLEN 84
>pdb|1ORD|A Chain A, Crystallographic Structure Of A Plp-Dependent Ornithine
Decarboxylase From Lactobacillus 30a To 3.1 Angstroms
Resolution
pdb|1ORD|B Chain B, Crystallographic Structure Of A Plp-Dependent Ornithine
Decarboxylase From Lactobacillus 30a To 3.1 Angstroms
Resolution
Length = 730
Score = 29.6 bits (65), Expect = 0.91, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 22 SQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIA-DVDKDGSGAI 80
S K +EA + FDTD V + A+G + T+ + +IA D + D A
Sbjct: 2 SSLKIASTQEARQYFDTD----------RVVVDAVGSDFTD--VGAVIAMDYETDVIDAA 49
Query: 81 DLDEF--EHMMTAKIGERDSKEELMKAFHIIDQDN 113
D +F K + S +EL K FHIID +N
Sbjct: 50 DATKFGIPVFAVTKDAQAISADELKKIFHIIDLEN 84
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 29.6 bits (65), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 7 GVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM------ 60
VS +D I+G L ++++ AF L+D + G I +E+ M+A+ ++M
Sbjct: 118 AVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAI-YDMMGKCTY 176
Query: 61 -------TEEQINQMIADVDKDGSGAIDLDEF 85
+ + +DK+ G + +DEF
Sbjct: 177 PVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 17/134 (12%)
Query: 30 KEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMM 89
EA EL + T KEL + R GF+ ++ SG ++ + F+ +
Sbjct: 49 PEALELLEAQSKFT--KKELQILYR--GFK-------------NECPSGVVNEETFKEIY 91
Query: 90 TAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDH 149
+ + DS F+ D D+NG +S D + L +++ D +
Sbjct: 92 SQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINK 151
Query: 150 DGEVNADEFIRMMK 163
DG + +E + +MK
Sbjct: 152 DGYITKEEMLDIMK 165
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 55/134 (41%), Gaps = 29/134 (21%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQM--IADVDKDGSGAIDLDEFEHMMT 90
F FDTD +G + ++ + L +E++N + D++KDG
Sbjct: 108 FNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYIT----------- 156
Query: 91 AKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHD 150
++ ++MKA + D GK + +K A + + ++ D++ D
Sbjct: 157 -----KEEMLDIMKAIY----DMMGKCTYPVLKEDAPR-------QHVETFFQKMDKNKD 200
Query: 151 GEVNADEFIRMMKR 164
G V DEFI ++
Sbjct: 201 GVVTIDEFIESCQK 214
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 24 QKKQEIKEAFELFDTDGSGTIDAKELNVAMRALG 57
+ ++E+ AF +FD + G ID +EL +RA G
Sbjct: 2 KSEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 29 IKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHM 88
I + F D D SGT++ EL + G ++ + +M+ D D +G I EF M
Sbjct: 53 IYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEF--M 110
Query: 89 MTAKIGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDR 136
K E +M D++ +G + +I ++LG R
Sbjct: 111 AMYKFMELAYNLFVMN-----DRNRSGTLEPHEILPALQQLGFYINQR 153
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 97 DSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNAD 156
D + + F +D+D +G + ++ G+ + + M+ D D +G ++
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 157 EFIRMMKRTTFGY 169
EF+ M K Y
Sbjct: 108 EFMAMYKFMELAY 120
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 129 LGVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTTFGY 169
+G D EI + E+ DR+ D EVN E++ + Y
Sbjct: 44 IGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFLGALALIY 84
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 99 KEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEA 145
K+E MK F I D++ D + +LG +T RE +++EA
Sbjct: 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEA 59
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 28 EIKEAFELFDTDGSGTIDAKELNVAMRAL-GFEMTEEQINQMIADVDKDGSGAIDLDEFE 86
E+ F+ D G+ +D +E A+ L + E + ++DK+G+G++ DEF
Sbjct: 131 ELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFA 190
Query: 87 HMMTA 91
+A
Sbjct: 191 AWASA 195
>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying
Discrimination Between Substrate And Solvent In Beta-
Phosphoglucomutase Catalysis
Length = 221
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query: 123 KRIARELGVNFTDREIHEMVEEADRD---------HDGEVNADEFIRMMKRTTFGY 169
K +A E+G+N DR+ +E ++ R+ D +V+A+EF + KR Y
Sbjct: 25 KALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80
>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An
Enzyme Catalyzed Phosphoryl Transfer Reaction Observed
On Cocrystallization With Glucose 6-Phosphate
pdb|1O08|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An
Enzyme Catalyzed Phosphoryl Transfer Reaction Observed
On Cocrystallization With Glucose 1-Phosphate
pdb|1Z4N|A Chain A, Structure Of Beta-phosphoglucomutase With Inhibitor Bound
Alpha-galactose 1-phosphate Cocrystallized With Fluoride
pdb|1Z4N|B Chain B, Structure Of Beta-phosphoglucomutase With Inhibitor Bound
Alpha-galactose 1-phosphate Cocrystallized With Fluoride
pdb|1Z4O|A Chain A, Structure Of Beta-Phosphoglucomutase With Inhibitor Bound
Alpha-Galactose 1-Phosphate
pdb|1Z4O|B Chain B, Structure Of Beta-Phosphoglucomutase With Inhibitor Bound
Alpha-Galactose 1-Phosphate
pdb|1ZOL|A Chain A, Native Beta-Pgm
pdb|2WF5|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phospahte And Trifluoromagnesate
pdb|2WHE|A Chain A, Structure Of Native Beta-Phosphoglucomutase In An Open
Conformation Without Bound Ligands.
pdb|2WF7|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphonate And Aluminium Tetrafluoride
pdb|2WF6|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phospahte And Aluminium Tetrafluoride
pdb|2WF8|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphate, Glucose-1-Phosphate And Beryllium
Trifluoride
pdb|2WF9|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphate, And Beryllium Trifluoride, Crystal
Form 2
pdb|2WFA|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Beryllium Trifluoride, In An Open Conformation
Length = 221
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query: 123 KRIARELGVNFTDREIHEMVEEADRD---------HDGEVNADEFIRMMKRTTFGY 169
K +A E+G+N DR+ +E ++ R+ D +V+A+EF + KR Y
Sbjct: 25 KALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80
>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase
From Lactoccocus Lactis To 2.3 Angstrom Resolution
pdb|1LVH|B Chain B, The Structure Of Phosphorylated Beta-phosphoglucomutase
From Lactoccocus Lactis To 2.3 Angstrom Resolution
Length = 221
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query: 123 KRIARELGVNFTDREIHEMVEEADRD---------HDGEVNADEFIRMMKRTTFGY 169
K +A E+G+N DR+ +E ++ R+ D +V+A+EF + KR Y
Sbjct: 25 KALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAK 92
F DT+ +GT+ KE LGF+ Q + + D+D S + E+ H+
Sbjct: 194 FRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQ-DALFRYADEDESDDVGFSEYVHLGLCL 252
Query: 93 IGERDSKEELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHE-MVEEADRDHDG 151
+ R ++ AF D D +G++S +++++ + + + R+ E D D
Sbjct: 253 LVLR-----ILYAF--ADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSK 305
Query: 152 EVNADEFIRMM 162
++ EF+ ++
Sbjct: 306 SLSYQEFVMLV 316
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 72/160 (45%), Gaps = 28/160 (17%)
Query: 31 EAFELFDTDGSGTIDAKELNVAMR------ALGFEMTEEQINQM----IADVDKDGSGAI 80
+ ++ FD D +G I+ KEL+ R ++T+E++ Q+ + D G +
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRL 74
Query: 81 DLDEFEHMMTAK------IGER----DSKEELMKAFHIIDQDNNGKISAGDIKRIARELG 130
++E + + + I R D+ E K + D D++G ISA ++K ++L
Sbjct: 75 QIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLF 134
Query: 131 VNFTDREIHEMVEEA--------DRDHDGEVNADEFIRMM 162
+ + ++E D++ DG ++ ++ R++
Sbjct: 135 LQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLDLNDLARIL 174
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 125 IAREL--GVNFTDREIHEMVEEADRDHDGEVNADEFIRMMKRTTFGY 169
I +EL G D EI +++++ DR+ D EVN E+I + Y
Sbjct: 38 IQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFLGALAMIY 84
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKIS 75
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 45 LDELFEELDKNGDGEVSFEEFQVLVKKIS 73
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKIS 75
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|3K9G|A Chain A, Crystal Structure Of A Plasmid Partition Protein From
Borrelia Burgdorferi At 2.25a Resolution, Iodide Soak
pdb|3K9H|A Chain A, Crystal Structure Of A Plasmid Partition Protein From
Borrelia Burgdorferi At 2.25a Resolution
pdb|3K9H|B Chain B, Crystal Structure Of A Plasmid Partition Protein From
Borrelia Burgdorferi At 2.25a Resolution
Length = 267
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 108 IIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEE 144
+ID D I++ ++I + LG+NFT I+E+++E
Sbjct: 60 LIDMDTQASITSYFYEKIEK-LGINFTKFNIYEILKE 95
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKIS 75
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 50 LDELFEELDKNGDGEVSFEEFQVLVKKIS 78
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D++ DGEV+ +EF ++K+ +
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKIS 75
>pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor
Domain
pdb|3VKH|B Chain B, X-Ray Structure Of A Functional Full-Length Dynein Motor
Domain
Length = 3367
Score = 27.7 bits (60), Expect = 3.4, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 40 GSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSK 99
G GT+ ++ ++++ E T + I +AD A +FEH++T + +RD
Sbjct: 469 GGGTLQQSKIQEQLQSI--EQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVV 526
Query: 100 EELMK 104
+L K
Sbjct: 527 RQLQK 531
>pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein
Motor Domain
pdb|3VKG|B Chain B, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein
Motor Domain
Length = 3245
Score = 27.7 bits (60), Expect = 3.4, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 40 GSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDLDEFEHMMTAKIGERDSK 99
G GT+ ++ ++++ E T + I +AD A +FEH++T + +RD
Sbjct: 469 GGGTLQQSKIQEQLQSI--EQTTQMILNNLADSVLQDLSAQKRKKFEHLITELVHQRDVV 526
Query: 100 EELMK 104
+L K
Sbjct: 527 RQLQK 531
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 27 QEIKEAFELFDTDGSGTIDAKEL----NVAMRALG--FEMTEEQ------INQMIADVDK 74
++++ AF+L+D D G I E+ + + +G E+ EE+ ++++ A +DK
Sbjct: 99 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDK 158
Query: 75 DGSGAIDLDEFEH 87
+ G + L EF+
Sbjct: 159 NADGKLTLQEFQE 171
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 135 DREIHEMVEEADRDHDGEVNADEFIRMMKRTT 166
R + ++ +E D++ DGEV+ +EF ++K+ +
Sbjct: 46 PRTLDDLFQELDKNGDGEVSFEEFQVLVKKIS 77
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 1 MASLYKGVSRKDKIRGRHHGLSQQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEM 60
+A L+K V+ +H ++Q+ FE FDT + TI +E +
Sbjct: 12 LARLHKAVT------SHYHAITQE--------FENFDTMKTNTISREEFRAICNRRVQIL 57
Query: 61 TEEQINQMIADVDKDGSGAIDLDEF 85
T+EQ +++ ++ + G + +F
Sbjct: 58 TDEQFDRLWNEMPVNAKGRLKYPDF 82
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 33 FELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMI-ADVDKDGSGAIDLDEF 85
F+ D +G G + +E+ A + + EQ+ Q+I +D DG+G ID +EF
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 138 IHEMVEEADRDHDGEVNADEFIRMMKRTT 166
+ E+ EE D+ DGEV+ +EF ++K+ +
Sbjct: 46 LDELFEELDKAGDGEVSFEEFQVLVKKIS 74
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase
(Fadd1) From Archaeoglobus Fulgidus
pdb|3G7S|B Chain B, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase
(Fadd1) From Archaeoglobus Fulgidus
Length = 549
Score = 26.2 bits (56), Expect = 8.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 91 AKIGERDSKE-ELMKAFHIIDQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDH 149
A IG+ D + E+ KAF ++ + GK+ DI RE + E VEE R
Sbjct: 468 AVIGKPDEEAGEVPKAFIVLKPEYRGKVDEEDIIEWVRERISGYKRVREVEFVEELPRTA 527
Query: 150 DGEV 153
G++
Sbjct: 528 SGKL 531
>pdb|1OHZ|B Chain B, Cohesin-Dockerin Complex From The Cellulosome Of
Clostridium Thermocellum
Length = 60
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 37 DTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGS 77
D +G GTI++ +L + R++ +T + ADVDK+GS
Sbjct: 3 DVNGDGTINSTDLTMLKRSVLRAITLTDDAKARADVDKNGS 43
>pdb|2CCL|B Chain B, The S45a, T46a Mutant Of The Type I Cohesin-Dockerin
Complex From The Cellulosome Of Clostridium
Thermocellum
pdb|2CCL|D Chain D, The S45a, T46a Mutant Of The Type I Cohesin-Dockerin
Complex From The Cellulosome Of Clostridium
Thermocellum
Length = 63
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 35 LFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGS 77
L D +G GTI++ +L + R++ +T + ADVDK+GS
Sbjct: 4 LGDVNGDGTINSTDLTMLKRSVLRAITLTDDAKARADVDKNGS 46
>pdb|2Y3N|B Chain B, Type Ii Cohesin-Dockerin Domain From Bacteroides
Cellolosolvens
pdb|2Y3N|D Chain D, Type Ii Cohesin-Dockerin Domain From Bacteroides
Cellolosolvens
Length = 71
Score = 26.2 bits (56), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 110 DQDNNGKISAGDIKRIARELGVNFTDREIHEMVEEADRDHDGEVNADEFIRM 161
D + +G I+ D+ +A+ G + ++E +AD ++DG +N+D+ I +
Sbjct: 8 DLNGDGVINMADVMILAQSFGKAIGNPGVNE---KADLNNDGVINSDDAIIL 56
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,005,089
Number of Sequences: 62578
Number of extensions: 200342
Number of successful extensions: 2085
Number of sequences better than 100.0: 362
Number of HSP's better than 100.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 742
Number of HSP's gapped (non-prelim): 819
length of query: 169
length of database: 14,973,337
effective HSP length: 92
effective length of query: 77
effective length of database: 9,216,161
effective search space: 709644397
effective search space used: 709644397
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (23.1 bits)